ECOD: domain e7ok0E1

Domain ID e7ok0E1

A: a+b two layers
X: Dodecin subunit-like
H: Flavin-binding protein dodecin-like
T: Flavin-binding protein dodecin-like
F: SHS2_Rpb7-N

UID:	002783938
Type:	Automatic domain
Parent:	e1go3E2
Range:	E:7-72
PDB:	7ok0
PDB Description:	DNA-directed RNA polymerase subunit E
Species:

Domains in the same chain:

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e7ok0E1	E:7-72	Dodecin subunit-like	Flavin-binding protein dodecin-like	Flavin-binding protein dodecin-like

Domains in the same PDB:

e7ok0A1	A:1-309	N-terminal domain in RNA-polymerase beta-prime subunit	N-terminal domain in RNA-polymerase beta-prime subunit	N-terminal domain in RNA-polymerase beta-prime subunit
e7ok0A3	A:304-347,A:411-496	cradle loop barrel	RIFT-related	double psi
e7ok0A5	A:348-410	MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase	MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase	MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
e7ok0A4	A:495-644,A:854-880	first helical domain in RNA-polymerase beta-prime subunit	first helical domain in RNA-polymerase beta-prime subunit	first helical domain in RNA-polymerase beta-prime subunit
e7ok0A2	A:645-853	second helical domain in RNA-polymerase beta-prime subunit	second helical domain in RNA-polymerase beta-prime subunit	second helical domain in RNA-polymerase beta-prime subunit
e7ok0B1	B:1-164,B:339-470	N-terminal domain in beta subunit of DNA dependent RNA-polymerase	N-terminal domain in beta subunit of DNA dependent RNA-polymerase	N-terminal domain in beta subunit of DNA dependent RNA-polymerase
e7ok0B5	B:165-339	insertion domain in beta subunit of DNA dependent RNA-polymerase	insertion domain in beta subunit of DNA dependent RNA-polymerase	insertion domain in beta subunit of DNA dependent RNA-polymerase
e7ok0B6	B:471-570	inserted a+b domain in yeast RNA polymerase beta subunit	inserted a+b domain in yeast RNA polymerase beta subunit	inserted a+b domain in yeast RNA polymerase beta subunit
e7ok0B4	B:571-709	barrel domain in beta subunit of DNA dependent RNA-polymerase	barrel domain in beta subunit of DNA dependent RNA-polymerase	barrel domain in beta subunit of DNA dependent RNA-polymerase
e7ok0B2	B:710-747,B:871-996	cradle loop barrel	RIFT-related	double psi
e7ok0B7	B:748-870	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Single hybrid motif
e7ok0B3	B:995-1121	C-terminal domain in beta subunit of DNA dependent RNA-polymerase	C-terminal domain in beta subunit of DNA dependent RNA-polymerase	C-terminal domain in beta subunit of DNA dependent RNA-polymerase
e7ok0C4	C:1-61	helical domain in yeast RNA-polymerases	third helical domain in yeast RNA-polymerase II beta-prime subunit	third helical domain in yeast RNA-polymerase II beta-prime subunit
e7ok0C1	C:62-113,C:274-393	central helical domain in RNA-polymerase beta-prime subunit	central helical domain in RNA-polymerase beta-prime subunit	central helical domain in RNA-polymerase beta-prime subunit
e7ok0C2	C:114-145,C:231-273	ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit	ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit	ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e7ok0C3	C:146-230	permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit	permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit	permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e7ok0D2	D:1-36,D:159-264	DCoH-like	RBP11-like subunits of RNA polymerase	RBP11-like subunits of RNA polymerase
e7ok0D1	D:37-158	Ribosomal protein TL5/L25 C-terminal domain-like	Insert subdomain of RNA polymerase alpha subunit	Insert subdomain of RNA polymerase alpha subunit
e7ok0E1	E:7-72	Dodecin subunit-like	Flavin-binding protein dodecin-like	Flavin-binding protein dodecin-like
e7ok0G1	G:2-123	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e7ok0H1	H:7-84	RPB5-like RNA polymerase subunit	RPB5-like RNA polymerase subunit	RPB5-like RNA polymerase subunit
e7ok0K1	K:1-86	RPB6/omega subunit-like	RPB6/omega subunit-like	RPB6
e7ok0L1	L:1-90	DCoH-like	RBP11-like subunits of RNA polymerase	RBP11-like subunits of RNA polymerase
e7ok0N1	N:1-66	HTH	RPB10	RPB10
e7ok0P1	P:2-48	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e7ok0Q1	Q:38-81	RuvA-C	RuvA-C, UBA, CRAL/TRIO-N, HBS1	RuvA-C, UBA, CRAL/TRIO-N, HBS1