Domain ID e7oobE2

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  • A: a+b two layers
  • X: RPB5-like RNA polymerase subunit
  • H: RPB5-like RNA polymerase subunit
  • T: RPB5-like RNA polymerase subunit
  • F: RNA_pol_Rpb5_C
UID: 002801156
Type: Automatic domain
Parent: e1dzfA1
Range: E:139-210
PDB: 7oob
PDB Description: DNA-directed RNA polymerase II subunit E
Species:

Structure of domain e7oobE2

Domains in the same chain:

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e7oobE1 E:2-138 Restriction endonuclease-like Eukaryotic RPB5 N-terminal domain Eukaryotic RPB5 N-terminal domain
e7oobE2 E:139-210 RPB5-like RNA polymerase subunit RPB5-like RNA polymerase subunit RPB5-like RNA polymerase subunit

Domains in the same PDB:

e7ooba1 a:1-365 beta-propeller-like beta-propeller 7-bladed
e7oobA2 A:11-155,A:182-350 N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit
e7oobA9 A:351-388,A:450-533 cradle loop barrel RIFT-related double psi
e7oobA3 A:389-449 MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
e7oobA6 A:534-685 first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit
e7oobA4 A:686-894 second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit
e7oobA1 A:895-1082 helical domain in yeast RNA-polymerases third helical domain in yeast RNA-polymerase II beta-prime subunit third helical domain in yeast RNA-polymerase II beta-prime subunit
e7oobA8 A:1083-1135,A:1361-1481 central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit
e7oobA5 A:1136-1164,A:1298-1360 ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e7oobA7 A:1165-1297 permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e7oobb1 b:490-753 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e7oobb2 b:754-1011,b:1383-1399 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e7oobB1 B:15-199,B:391-528 N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase
e7oobB5 B:200-391 insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase
e7oobB6 B:529-618 inserted a+b domain in yeast RNA polymerase beta subunit inserted a+b domain in yeast RNA polymerase beta subunit inserted a+b domain in yeast RNA polymerase beta subunit
e7oobB4 B:619-767 barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase
e7oobB2 B:768-805,B:930-1055 cradle loop barrel RIFT-related double psi
e7oobB7 B:806-929 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e7oobB3 B:1054-1174 C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase
e7oobC1 C:2-42,C:179-270 DCoH-like RBP11-like subunits of RNA polymerase RBP11-like subunits of RNA polymerase
e7oobC2 C:43-178 Ribosomal protein TL5/L25 C-terminal domain-like Insert subdomain of RNA polymerase alpha subunit Insert subdomain of RNA polymerase alpha subunit
e7oobd1 d:1-355 beta-propeller-like beta-propeller 7-bladed
e7oobd2 d:356-393,d:710-1044 beta-propeller-like beta-propeller 7-bladed
e7oobd3 d:1045-1140 HTH HTH tri-helical
e7oobD1 D:14-139 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e7oobE1 E:2-138 Restriction endonuclease-like Eukaryotic RPB5 N-terminal domain Eukaryotic RPB5 N-terminal domain
e7oobE2 E:139-210 RPB5-like RNA polymerase subunit RPB5-like RNA polymerase subunit RPB5-like RNA polymerase subunit
e7oobF1 F:46-127 RPB6/omega subunit-like RPB6/omega subunit-like RPB6
e7oobG2 G:1-78 Dodecin subunit-like Flavin-binding protein dodecin-like Flavin-binding protein dodecin-like
e7oobG1 G:79-171 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e7oobH1 H:2-149 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e7oobI2 I:9-61 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e7oobI1 I:62-125 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e7oobJ1 J:1-67 HTH RPB10 RPB10
e7oobK1 K:1-115 DCoH-like RBP11-like subunits of RNA polymerase RBP11-like subunits of RNA polymerase
e7oobL1 L:13-58 Rubredoxin-like Rubredoxin-related Rubredoxin-related