Domain ID e7opdM2

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  • A: alpha complex topology
  • X: Tex N-terminal region-like
  • H: Tex N-terminal region-like
  • T: Tex N-terminal region-like
  • F: Tex_central_region
UID: 002821011
Type: Automatic domain
Parent: e3bzkA6
Range: M:515-756
PDB: 7opd
PDB Description: Transcription elongation factor SPT6
Species:

Structure of domain e7opdM2

Domains in the same chain:

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e7opdM5 M:284-332,M:355-404 HTH Tex N-terminal domain Tex N-terminal domain
e7opdM4 M:405-475 immunoglobulin/albumin-binding domain-like Tex bundle domain-like Tex bundle domain-like
e7opdM2 M:515-756 Tex N-terminal region-like Tex N-terminal region-like Tex N-terminal region-like
e7opdM3 M:757-944 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e7opdM1 M:945-1042 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e7opdM6 M:1043-1144 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e7opdM7 M:1145-1175,M:1226-1287 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins

Domains in the same PDB:

e7opda1 a:1-365 beta-propeller-like beta-propeller 7-bladed
e7opdA3 A:11-155,A:182-350 N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit
e7opdA8 A:351-388,A:450-533 cradle loop barrel RIFT-related double psi
e7opdA2 A:389-449 MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
e7opdA6 A:534-685 first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit
e7opdA4 A:686-894 second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit
e7opdA9 A:895-1082 helical domain in yeast RNA-polymerases third helical domain in yeast RNA-polymerase II beta-prime subunit third helical domain in yeast RNA-polymerase II beta-prime subunit
e7opdA5 A:1083-1135,A:1361-1481 central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit
e7opdA7 A:1136-1164,A:1298-1360 ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e7opdA1 A:1165-1297 permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e7opdb1 b:490-753 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e7opdb2 b:754-1011,b:1383-1399 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e7opdB1 B:15-199,B:391-528 N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase
e7opdB5 B:200-391 insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase
e7opdB6 B:529-618 inserted a+b domain in yeast RNA polymerase beta subunit inserted a+b domain in yeast RNA polymerase beta subunit inserted a+b domain in yeast RNA polymerase beta subunit
e7opdB4 B:619-767 barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase
e7opdB2 B:768-805,B:930-1055 cradle loop barrel RIFT-related double psi
e7opdB7 B:806-929 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e7opdB3 B:1054-1174 C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase
e7opdc1 c:3-143 Repetitive alpha hairpins ARM repeat ARM repeat
e7opdC1 C:2-42,C:179-270 DCoH-like RBP11-like subunits of RNA polymerase RBP11-like subunits of RNA polymerase
e7opdC2 C:43-178 Ribosomal protein TL5/L25 C-terminal domain-like Insert subdomain of RNA polymerase alpha subunit Insert subdomain of RNA polymerase alpha subunit
e7opdd1 d:1-385 beta-propeller-like beta-propeller 7-bladed
e7opdd4 d:386-684 beta-propeller-like beta-propeller 7-bladed
e7opdd2 d:685-1044 beta-propeller-like beta-propeller 7-bladed
e7opdd3 d:1045-1140 HTH HTH tri-helical
e7opdD1 D:14-141 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e7opde1 e:49-402 Repetitive alpha hairpins ARM repeat ARM repeat
e7opde4 e:403-492 Repetitive alpha hairpins ARM repeat ARM repeat
e7opde3 e:493-591 a+b domain in cullin-like proteins a+b domain in cullin-like proteins a+b domain in cullin-like proteins
e7opde5 e:592-674 HTH HTH winged
e7opde2 e:675-759 HTH HTH winged
e7opdE1 E:2-138 Restriction endonuclease-like Eukaryotic RPB5 N-terminal domain Eukaryotic RPB5 N-terminal domain
e7opdE2 E:139-210 RPB5-like RNA polymerase subunit RPB5-like RNA polymerase subunit RPB5-like RNA polymerase subunit
e7opdF1 F:46-127 RPB6/omega subunit-like RPB6/omega subunit-like RPB6
e7opdG2 G:1-78 Dodecin subunit-like Flavin-binding protein dodecin-like Flavin-binding protein dodecin-like
e7opdG1 G:79-171 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e7opdH1 H:2-149 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e7opdI2 I:9-61 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e7opdI1 I:62-125 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e7opdJ1 J:1-67 HTH RPB10 RPB10
e7opdK1 K:1-115 DCoH-like RBP11-like subunits of RNA polymerase RBP11-like subunits of RNA polymerase
e7opdL1 L:13-58 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e7opdM5 M:284-332,M:355-404 HTH Tex N-terminal domain Tex N-terminal domain
e7opdM4 M:405-475 immunoglobulin/albumin-binding domain-like Tex bundle domain-like Tex bundle domain-like
e7opdM2 M:515-756 Tex N-terminal region-like Tex N-terminal region-like Tex N-terminal region-like
e7opdM3 M:757-944 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e7opdM1 M:945-1042 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e7opdM6 M:1043-1144 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e7opdM7 M:1145-1175,M:1226-1287 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e7opdY1 Y:5-304 beta-propeller-like beta-propeller 8-bladed