Domain ID e7oqyY2

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  • A: few secondary structure elements
  • X: Rubredoxin-like
  • H: Rubredoxin-related
  • T: Rubredoxin-related
  • F: RNA_POL_M_15KD
UID: 002772109
Type: Automatic domain
Parent: e1twfI1
Range: Y:1-40
Ligands: ZN
PDB: 7oqy
PDB Description: DNA-directed RNA polymerase, subunit M (RpoM-2)
Species:

Structure of domain e7oqyY2

Domains in the same chain:

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e7oqyY2 Y:1-40 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e7oqyY1 Y:41-92 Rubredoxin-like Rubredoxin-related Rubredoxin-related

Domains in the same PDB:

e7oqyA1 A:2-309 N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit
e7oqyA3 A:304-347,A:411-496 cradle loop barrel RIFT-related double psi
e7oqyA5 A:348-410 MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
e7oqyA4 A:495-644,A:854-880 first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit
e7oqyA2 A:645-853 second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit
e7oqyB1 B:1-164,B:339-470 N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase
e7oqyB5 B:165-339 insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase
e7oqyB6 B:471-570 inserted a+b domain in yeast RNA polymerase beta subunit inserted a+b domain in yeast RNA polymerase beta subunit inserted a+b domain in yeast RNA polymerase beta subunit
e7oqyB4 B:571-709 barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase
e7oqyB2 B:710-747,B:871-996 cradle loop barrel RIFT-related double psi
e7oqyB7 B:748-870 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e7oqyB3 B:995-1120 C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase
e7oqyC4 C:1-61 helical domain in yeast RNA-polymerases third helical domain in yeast RNA-polymerase II beta-prime subunit third helical domain in yeast RNA-polymerase II beta-prime subunit
e7oqyC1 C:62-113,C:274-393 central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit
e7oqyC2 C:114-145,C:231-273 ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e7oqyC3 C:146-230 permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e7oqyD2 D:1-36,D:159-264 DCoH-like RBP11-like subunits of RNA polymerase RBP11-like subunits of RNA polymerase
e7oqyD1 D:37-158 Ribosomal protein TL5/L25 C-terminal domain-like Insert subdomain of RNA polymerase alpha subunit Insert subdomain of RNA polymerase alpha subunit
e7oqyE1 E:1-78 Dodecin subunit-like Flavin-binding protein dodecin-like Flavin-binding protein dodecin-like
e7oqyE2 E:79-182 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e7oqyF1 F:1-109 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e7oqyG1 G:4-125 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e7oqyH1 H:8-84 RPB5-like RNA polymerase subunit RPB5-like RNA polymerase subunit RPB5-like RNA polymerase subunit
e7oqyK1 K:1-86 RPB6/omega subunit-like RPB6/omega subunit-like RPB6
e7oqyL1 L:1-90 DCoH-like RBP11-like subunits of RNA polymerase RBP11-like subunits of RNA polymerase
e7oqyN1 N:1-66 HTH RPB10 RPB10
e7oqyP1 P:2-48 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e7oqyQ1 Q:36-78 RuvA-C RuvA-C, UBA, CRAL/TRIO-N, HBS1 RuvA-C, UBA, CRAL/TRIO-N, HBS1
e7oqyY2 Y:1-40 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e7oqyY1 Y:41-92 Rubredoxin-like Rubredoxin-related Rubredoxin-related