ECOD: domain e7oqyY2

Domain ID e7oqyY2

A: few secondary structure elements
X: Rubredoxin-like
H: Rubredoxin-related
T: Rubredoxin-related
F: RNA_POL_M_15KD

UID:	002772109
Type:	Automatic domain
Parent:	e1twfI1
Range:	Y:1-40
Ligands:	ZN
PDB:	7oqy
PDB Description:	DNA-directed RNA polymerase, subunit M (RpoM-2)
Species:

Domains in the same chain:

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e7oqyY2	Y:1-40	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e7oqyY1	Y:41-92	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related

Domains in the same PDB:

e7oqyA1	A:2-309	N-terminal domain in RNA-polymerase beta-prime subunit	N-terminal domain in RNA-polymerase beta-prime subunit	N-terminal domain in RNA-polymerase beta-prime subunit
e7oqyA3	A:304-347,A:411-496	cradle loop barrel	RIFT-related	double psi
e7oqyA5	A:348-410	MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase	MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase	MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
e7oqyA4	A:495-644,A:854-880	first helical domain in RNA-polymerase beta-prime subunit	first helical domain in RNA-polymerase beta-prime subunit	first helical domain in RNA-polymerase beta-prime subunit
e7oqyA2	A:645-853	second helical domain in RNA-polymerase beta-prime subunit	second helical domain in RNA-polymerase beta-prime subunit	second helical domain in RNA-polymerase beta-prime subunit
e7oqyB1	B:1-164,B:339-470	N-terminal domain in beta subunit of DNA dependent RNA-polymerase	N-terminal domain in beta subunit of DNA dependent RNA-polymerase	N-terminal domain in beta subunit of DNA dependent RNA-polymerase
e7oqyB5	B:165-339	insertion domain in beta subunit of DNA dependent RNA-polymerase	insertion domain in beta subunit of DNA dependent RNA-polymerase	insertion domain in beta subunit of DNA dependent RNA-polymerase
e7oqyB6	B:471-570	inserted a+b domain in yeast RNA polymerase beta subunit	inserted a+b domain in yeast RNA polymerase beta subunit	inserted a+b domain in yeast RNA polymerase beta subunit
e7oqyB4	B:571-709	barrel domain in beta subunit of DNA dependent RNA-polymerase	barrel domain in beta subunit of DNA dependent RNA-polymerase	barrel domain in beta subunit of DNA dependent RNA-polymerase
e7oqyB2	B:710-747,B:871-996	cradle loop barrel	RIFT-related	double psi
e7oqyB7	B:748-870	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Single hybrid motif
e7oqyB3	B:995-1120	C-terminal domain in beta subunit of DNA dependent RNA-polymerase	C-terminal domain in beta subunit of DNA dependent RNA-polymerase	C-terminal domain in beta subunit of DNA dependent RNA-polymerase
e7oqyC4	C:1-61	helical domain in yeast RNA-polymerases	third helical domain in yeast RNA-polymerase II beta-prime subunit	third helical domain in yeast RNA-polymerase II beta-prime subunit
e7oqyC1	C:62-113,C:274-393	central helical domain in RNA-polymerase beta-prime subunit	central helical domain in RNA-polymerase beta-prime subunit	central helical domain in RNA-polymerase beta-prime subunit
e7oqyC2	C:114-145,C:231-273	ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit	ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit	ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e7oqyC3	C:146-230	permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit	permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit	permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e7oqyD2	D:1-36,D:159-264	DCoH-like	RBP11-like subunits of RNA polymerase	RBP11-like subunits of RNA polymerase
e7oqyD1	D:37-158	Ribosomal protein TL5/L25 C-terminal domain-like	Insert subdomain of RNA polymerase alpha subunit	Insert subdomain of RNA polymerase alpha subunit
e7oqyE1	E:1-78	Dodecin subunit-like	Flavin-binding protein dodecin-like	Flavin-binding protein dodecin-like
e7oqyE2	E:79-182	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e7oqyF1	F:1-109	HhH/H2TH	SAM/DNA-glycosylase	SAM domain-like
e7oqyG1	G:4-125	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e7oqyH1	H:8-84	RPB5-like RNA polymerase subunit	RPB5-like RNA polymerase subunit	RPB5-like RNA polymerase subunit
e7oqyK1	K:1-86	RPB6/omega subunit-like	RPB6/omega subunit-like	RPB6
e7oqyL1	L:1-90	DCoH-like	RBP11-like subunits of RNA polymerase	RBP11-like subunits of RNA polymerase
e7oqyN1	N:1-66	HTH	RPB10	RPB10
e7oqyP1	P:2-48	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e7oqyQ1	Q:36-78	RuvA-C	RuvA-C, UBA, CRAL/TRIO-N, HBS1	RuvA-C, UBA, CRAL/TRIO-N, HBS1
e7oqyY2	Y:1-40	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e7oqyY1	Y:41-92	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related