Domain ID e7ozpS2

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  • A: a+b two layers
  • X: Dodecin subunit-like
  • H: Flavin-binding protein dodecin-like
  • T: Flavin-binding protein dodecin-like
  • F: SHS2_Rpb7-N
UID: 002801845
Type: Automatic domain
Parent: e1go3E2
Range: S:1-78
PDB: 7ozp
PDB Description: DNA-directed RNA polymerase II subunit RPB7
Species:

Structure of domain e7ozpS2

Domains in the same chain:

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e7ozpS2 S:1-78 Dodecin subunit-like Flavin-binding protein dodecin-like Flavin-binding protein dodecin-like
e7ozpS1 S:79-171 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins

Domains in the same PDB:

e7ozpA2 A:360-388,A:450-533 cradle loop barrel RIFT-related double psi
e7ozpA5 A:389-449 MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
e7ozpA3 A:534-685 first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit
e7ozpA1 A:686-894 second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit
e7ozpA4 A:895-1082 helical domain in yeast RNA-polymerases third helical domain in yeast RNA-polymerase II beta-prime subunit third helical domain in yeast RNA-polymerase II beta-prime subunit
e7ozpA7 A:1083-1135,A:1361-1420,A:1467-1487 central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit
e7ozpA8 A:1136-1164,A:1297-1360 ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e7ozpA6 A:1165-1296 permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e7ozpB1 B:15-199,B:391-528 N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase
e7ozpB4 B:200-391 insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase
e7ozpB5 B:529-618 inserted a+b domain in yeast RNA polymerase beta subunit inserted a+b domain in yeast RNA polymerase beta subunit inserted a+b domain in yeast RNA polymerase beta subunit
e7ozpB3 B:619-768 barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase
e7ozpB2 B:769-805,B:930-1061 cradle loop barrel RIFT-related double psi
e7ozpB6 B:806-929 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e7ozpC2 C:2-42,C:179-271 DCoH-like RBP11-like subunits of RNA polymerase RBP11-like subunits of RNA polymerase
e7ozpC1 C:43-178 Ribosomal protein TL5/L25 C-terminal domain-like Insert subdomain of RNA polymerase alpha subunit Insert subdomain of RNA polymerase alpha subunit
e7ozpD1 D:14-142 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e7ozpE1 E:2-138 Restriction endonuclease-like Eukaryotic RPB5 N-terminal domain Eukaryotic RPB5 N-terminal domain
e7ozpE2 E:139-210 RPB5-like RNA polymerase subunit RPB5-like RNA polymerase subunit RPB5-like RNA polymerase subunit
e7ozpF1 F:49-127 RPB6/omega subunit-like RPB6/omega subunit-like RPB6
e7ozpG2 G:1-78 Dodecin subunit-like Flavin-binding protein dodecin-like Flavin-binding protein dodecin-like
e7ozpG1 G:79-171 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e7ozpH1 H:2-149 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e7ozpI2 I:12-61 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e7ozpI1 I:62-125 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e7ozpJ1 J:1-65 HTH RPB10 RPB10
e7ozpK1 K:1-115 DCoH-like RBP11-like subunits of RNA polymerase RBP11-like subunits of RNA polymerase
e7ozpL1 L:15-58 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e7ozpM2 M:360-388,M:450-533 cradle loop barrel RIFT-related double psi
e7ozpM5 M:389-449 MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
e7ozpM3 M:534-685 first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit
e7ozpM1 M:686-894 second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit
e7ozpM4 M:895-1082 helical domain in yeast RNA-polymerases third helical domain in yeast RNA-polymerase II beta-prime subunit third helical domain in yeast RNA-polymerase II beta-prime subunit
e7ozpM7 M:1083-1135,M:1361-1420,M:1467-1487 central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit
e7ozpM8 M:1136-1164,M:1297-1360 ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e7ozpM6 M:1165-1296 permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e7ozpN1 N:15-199,N:391-528 N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase
e7ozpN4 N:200-391 insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase
e7ozpN5 N:529-618 inserted a+b domain in yeast RNA polymerase beta subunit inserted a+b domain in yeast RNA polymerase beta subunit inserted a+b domain in yeast RNA polymerase beta subunit
e7ozpN3 N:619-768 barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase
e7ozpN2 N:769-805,N:930-1061 cradle loop barrel RIFT-related double psi
e7ozpN6 N:806-929 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e7ozpO1 O:2-42,O:179-271 DCoH-like RBP11-like subunits of RNA polymerase RBP11-like subunits of RNA polymerase
e7ozpO2 O:43-178 Ribosomal protein TL5/L25 C-terminal domain-like Insert subdomain of RNA polymerase alpha subunit Insert subdomain of RNA polymerase alpha subunit
e7ozpP1 P:14-142 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e7ozpQ1 Q:2-138 Restriction endonuclease-like Eukaryotic RPB5 N-terminal domain Eukaryotic RPB5 N-terminal domain
e7ozpQ2 Q:139-210 RPB5-like RNA polymerase subunit RPB5-like RNA polymerase subunit RPB5-like RNA polymerase subunit
e7ozpR1 R:49-127 RPB6/omega subunit-like RPB6/omega subunit-like RPB6
e7ozpS2 S:1-78 Dodecin subunit-like Flavin-binding protein dodecin-like Flavin-binding protein dodecin-like
e7ozpS1 S:79-171 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e7ozpT1 T:2-149 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e7ozpU2 U:12-61 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e7ozpU1 U:62-125 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e7ozpV1 V:1-65 HTH RPB10 RPB10
e7ozpW1 W:1-115 DCoH-like RBP11-like subunits of RNA polymerase RBP11-like subunits of RNA polymerase
e7ozpX1 X:15-58 Rubredoxin-like Rubredoxin-related Rubredoxin-related