Domain ID e7pksB7

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  • A: a+b complex topology
  • X: alpha/beta-Hammerhead/Barrel-sandwich hybrid
  • H: alpha/beta-Hammerhead/Barrel-sandwich hybrid
  • T: Single hybrid motif
  • F: RNA_pol_Rpb2_6
UID: 002803070
Type: Automatic domain
Parent: e4by7B6
Range: B:806-929
PDB: 7pks
PDB Description: DNA-directed RNA polymerase subunit beta
Species:

Structure of domain e7pksB7

Domains in the same chain:

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e7pksB1 B:14-199,B:391-528 N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase
e7pksB5 B:200-391 insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase
e7pksB6 B:529-618 inserted a+b domain in yeast RNA polymerase beta subunit inserted a+b domain in yeast RNA polymerase beta subunit inserted a+b domain in yeast RNA polymerase beta subunit
e7pksB4 B:619-767 barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase
e7pksB2 B:768-805,B:930-1055 cradle loop barrel RIFT-related double psi
e7pksB7 B:806-929 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e7pksB3 B:1054-1174 C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase

Domains in the same PDB:

e7pksA1 A:11-154,A:182-350 N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit
e7pksA3 A:345-388,A:450-535 cradle loop barrel RIFT-related double psi
e7pksA6 A:389-449 MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
e7pksA4 A:534-685 first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit
e7pksA2 A:686-894 second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit
e7pksA5 A:895-1082 helical domain in yeast RNA-polymerases third helical domain in yeast RNA-polymerase II beta-prime subunit third helical domain in yeast RNA-polymerase II beta-prime subunit
e7pksA8 A:1083-1135,A:1361-1484 central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit
e7pksA9 A:1136-1163,A:1300-1360 ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e7pksA7 A:1164-1299 permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e7pksB1 B:14-199,B:391-528 N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase
e7pksB5 B:200-391 insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase
e7pksB6 B:529-618 inserted a+b domain in yeast RNA polymerase beta subunit inserted a+b domain in yeast RNA polymerase beta subunit inserted a+b domain in yeast RNA polymerase beta subunit
e7pksB4 B:619-767 barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase
e7pksB2 B:768-805,B:930-1055 cradle loop barrel RIFT-related double psi
e7pksB7 B:806-929 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e7pksB3 B:1054-1174 C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase
e7pksC2 C:2-42,C:179-271 DCoH-like RBP11-like subunits of RNA polymerase RBP11-like subunits of RNA polymerase
e7pksC1 C:43-178 Ribosomal protein TL5/L25 C-terminal domain-like Insert subdomain of RNA polymerase alpha subunit Insert subdomain of RNA polymerase alpha subunit
e7pksD1 D:14-139 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e7pksE1 E:2-138 Restriction endonuclease-like Eukaryotic RPB5 N-terminal domain Eukaryotic RPB5 N-terminal domain
e7pksE2 E:139-210 RPB5-like RNA polymerase subunit RPB5-like RNA polymerase subunit RPB5-like RNA polymerase subunit
e7pksF1 F:50-127 RPB6/omega subunit-like RPB6/omega subunit-like RPB6
e7pksG2 G:1-78 Dodecin subunit-like Flavin-binding protein dodecin-like Flavin-binding protein dodecin-like
e7pksG1 G:79-171 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e7pksH1 H:2-149 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e7pksi1 i:1-266,i:424-556 Metallo-hydrolase/oxidoreductase Metallo-hydrolase/oxidoreductase Metallo-hydrolase/oxidoreductase
e7pksi2 i:267-423 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e7pksI2 I:9-61 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e7pksI1 I:62-125 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e7pksJ1 J:1-67 HTH RPB10 RPB10
e7pksK1 K:1-115 DCoH-like RBP11-like subunits of RNA polymerase RBP11-like subunits of RNA polymerase
e7pksL1 L:13-58 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e7pksp1 p:8-587 Repetitive alpha hairpins ARM repeat ARM repeat
e7pksq1 q:6-295 Carbon-nitrogen hydrolase-like Metallo-dependent phosphatases Metallo-dependent phosphatases
e7pksZ2 Z:416-470 SH3 SH3 SH3
e7pksZ1 Z:471-527 SH3 SH3 SH3
e7pksZ5 Z:528-580 SH3 SH3 SH3
e7pksZ3 Z:581-646 SH3 SH3 SH3
e7pksZ4 Z:703-753 SH3 SH3 SH3