Domain ID e7zs9D1

Download files:
  • A: alpha arrays
  • X: HhH/H2TH
  • H: SAM/DNA-glycosylase
  • T: SAM domain-like
  • F: RNA_pol_Rpb4
UID: 003018234
Type: Automatic domain
Parent: e1go3F1
Range: D:11-71,D:131-220
PDB: 7zs9
PDB Description: DNA-directed RNA polymerase II subunit RPB4
Species:

Structure of domain e7zs9D1

Domains in the same chain:

Download Pymol

e7zs9D1 D:11-71,D:131-220 HhH/H2TH SAM/DNA-glycosylase SAM domain-like

Domains in the same PDB:

e7zs902 0:1-250,0:438-502,0:724-752 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e7zs903 0:247-441 XPD arch domain XPD arch domain XPD arch domain
e7zs901 0:503-723 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e7zs931 3:9-79 RING/U-box-like RING/U-box-like RING/U-box
e7zs932 3:80-139 beta-beta-alpha zinc fingers beta-beta-alpha zinc fingers beta-beta-alpha zinc fingers
e7zs941 4:21-285 HAD domain-like HAD domain-related vWA-like
e7zs942 4:286-328 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e7zs951 5:2-66 TFB5-related TFB5-related TFB5-related
e7zs9a1 a:38-134 Histone-like Histone-related Histone
e7zs9A9 A:2-336 N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit
e7zs9A2 A:337-374,A:436-519 cradle loop barrel RIFT-related double psi
e7zs9A7 A:375-435 MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
e7zs9A5 A:520-662 first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit
e7zs9A8 A:663-871 second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit
e7zs9A4 A:872-1059 helical domain in yeast RNA-polymerases third helical domain in yeast RNA-polymerase II beta-prime subunit third helical domain in yeast RNA-polymerase II beta-prime subunit
e7zs9A3 A:1060-1102,A:1301-1454 central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit
e7zs9A1 A:1103-1131,A:1243-1300 ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e7zs9A6 A:1132-1242 permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e7zs9b1 b:21-102 Histone-like Histone-related Histone
e7zs9B2 B:18-218,B:405-541 N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase
e7zs9B6 B:219-404 insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase
e7zs9B4 B:542-630 inserted a+b domain in yeast RNA polymerase beta subunit inserted a+b domain in yeast RNA polymerase beta subunit inserted a+b domain in yeast RNA polymerase beta subunit
e7zs9B3 B:631-813 barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase
e7zs9B7 B:814-850,B:975-1097 cradle loop barrel RIFT-related double psi
e7zs9B5 B:851-974 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e7zs9B1 B:1098-1224 C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase
e7zs9c1 c:11-119 Histone-like Histone-related Histone
e7zs9C1 C:3-37,C:173-268 DCoH-like RBP11-like subunits of RNA polymerase RBP11-like subunits of RNA polymerase
e7zs9C2 C:38-172 Ribosomal protein TL5/L25 C-terminal domain-like Insert subdomain of RNA polymerase alpha subunit Insert subdomain of RNA polymerase alpha subunit
e7zs9d1 d:26-122 Histone-like Histone-related Histone
e7zs9D1 D:11-71,D:131-220 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e7zs9e1 e:37-134 Histone-like Histone-related Histone
e7zs9E1 E:2-143 Restriction endonuclease-like Eukaryotic RPB5 N-terminal domain Eukaryotic RPB5 N-terminal domain
e7zs9E2 E:144-215 RPB5-like RNA polymerase subunit RPB5-like RNA polymerase subunit RPB5-like RNA polymerase subunit
e7zs9f1 f:23-102 Histone-like Histone-related Histone
e7zs9F1 F:34-35,F:62-155 RPB6/omega subunit-like RPB6/omega subunit-like RPB6
e7zs9g1 g:13-118 Histone-like Histone-related Histone
e7zs9G1 G:1-68 Dodecin subunit-like Flavin-binding protein dodecin-like Flavin-binding protein dodecin-like
e7zs9G2 G:69-171 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e7zs9h1 h:28-122 Histone-like Histone-related Histone
e7zs9H1 H:2-146 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e7zs9I2 I:2-49 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e7zs9I1 I:50-117 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e7zs9J1 J:1-69 HTH RPB10 RPB10
e7zs9K1 K:1-115 DCoH-like RBP11-like subunits of RNA polymerase RBP11-like subunits of RNA polymerase
e7zs9L1 L:26-70 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e7zs9M3 M:14-58 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e7zs9M2 M:78-230 HTH HTH Cyclin-like
e7zs9M1 M:231-342 HTH HTH Cyclin-like
e7zs9O1 O:60-156 TBP-like TATA-box binding protein-like TATA-box binding protein-like
e7zs9O2 O:157-240 TBP-like TATA-box binding protein-like TATA-box binding protein-like
e7zs9U1 U:3-56 TFIIA, alpha-helical domain TFIIA, alpha-helical domain TFIIA, alpha-helical domain
e7zs9U2 U:229-286 Transcription factor IIA (TFIIA), beta-barrel domain Transcription factor IIA (TFIIA), beta-barrel domain Transcription factor IIA (TFIIA), beta-barrel domain
e7zs9V1 V:5-54 TFIIA, alpha-helical domain TFIIA, alpha-helical domain TFIIA, alpha-helical domain
e7zs9V2 V:55-122 Transcription factor IIA (TFIIA), beta-barrel domain Transcription factor IIA (TFIIA), beta-barrel domain Transcription factor IIA (TFIIA), beta-barrel domain