Domain ID e7zsaB1

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  • A: a+b complex topology
  • X: barrel domain in beta subunit of DNA dependent RNA-polymerase
  • H: barrel domain in beta subunit of DNA dependent RNA-polymerase
  • T: barrel domain in beta subunit of DNA dependent RNA-polymerase
  • F: RNA_pol_Rpb2_6,RNA_pol_Rpb2_5
UID: 003018280
Type: Automatic domain
Parent: e1twfB2
Range: B:631-813
PDB: 7zsa
PDB Description: DNA-directed RNA polymerase II subunit RPB2
Species:

Structure of domain e7zsaB1

Domains in the same chain:

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e7zsaB5 B:18-218,B:405-541 N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase
e7zsaB7 B:219-404 insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase
e7zsaB4 B:542-630 inserted a+b domain in yeast RNA polymerase beta subunit inserted a+b domain in yeast RNA polymerase beta subunit inserted a+b domain in yeast RNA polymerase beta subunit
e7zsaB1 B:631-813 barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase
e7zsaB6 B:814-850,B:975-1097 cradle loop barrel RIFT-related double psi
e7zsaB3 B:851-974 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e7zsaB2 B:1098-1224 C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase

Domains in the same PDB:

e7zsa02 0:1-250,0:438-502,0:724-752 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e7zsa03 0:247-441 XPD arch domain XPD arch domain XPD arch domain
e7zsa01 0:503-723 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e7zsa31 3:9-79 RING/U-box-like RING/U-box-like RING/U-box
e7zsa32 3:80-139 beta-beta-alpha zinc fingers beta-beta-alpha zinc fingers beta-beta-alpha zinc fingers
e7zsa42 4:21-285 HAD domain-like HAD domain-related vWA-like
e7zsa41 4:286-328 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e7zsa51 5:2-66 TFB5-related TFB5-related TFB5-related
e7zsaa1 a:35-134 Histone-like Histone-related Histone
e7zsaA6 A:2-336 N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit
e7zsaA4 A:337-374,A:436-519 cradle loop barrel RIFT-related double psi
e7zsaA7 A:375-435 MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
e7zsaA8 A:520-662 first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit
e7zsaA5 A:663-871 second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit
e7zsaA3 A:872-1059 helical domain in yeast RNA-polymerases third helical domain in yeast RNA-polymerase II beta-prime subunit third helical domain in yeast RNA-polymerase II beta-prime subunit
e7zsaA1 A:1060-1102,A:1301-1454 central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit
e7zsaA9 A:1103-1131,A:1243-1300 ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e7zsaA2 A:1132-1242 permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e7zsab1 b:20-101 Histone-like Histone-related Histone
e7zsaB5 B:18-218,B:405-541 N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase
e7zsaB7 B:219-404 insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase
e7zsaB4 B:542-630 inserted a+b domain in yeast RNA polymerase beta subunit inserted a+b domain in yeast RNA polymerase beta subunit inserted a+b domain in yeast RNA polymerase beta subunit
e7zsaB1 B:631-813 barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase
e7zsaB6 B:814-850,B:975-1097 cradle loop barrel RIFT-related double psi
e7zsaB3 B:851-974 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e7zsaB2 B:1098-1224 C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase
e7zsac1 c:12-118 Histone-like Histone-related Histone
e7zsaC2 C:3-37,C:173-268 DCoH-like RBP11-like subunits of RNA polymerase RBP11-like subunits of RNA polymerase
e7zsaC1 C:38-172 Ribosomal protein TL5/L25 C-terminal domain-like Insert subdomain of RNA polymerase alpha subunit Insert subdomain of RNA polymerase alpha subunit
e7zsad1 d:29-122 Histone-like Histone-related Histone
e7zsaD1 D:11-71,D:131-220 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e7zsae1 e:37-134 Histone-like Histone-related Histone
e7zsaE2 E:2-143 Restriction endonuclease-like Eukaryotic RPB5 N-terminal domain Eukaryotic RPB5 N-terminal domain
e7zsaE1 E:144-215 RPB5-like RNA polymerase subunit RPB5-like RNA polymerase subunit RPB5-like RNA polymerase subunit
e7zsaf1 f:17-102 Histone-like Histone-related Histone
e7zsaF1 F:34-35,F:62-155 RPB6/omega subunit-like RPB6/omega subunit-like RPB6
e7zsag1 g:12-118 Histone-like Histone-related Histone
e7zsaG2 G:1-68 Dodecin subunit-like Flavin-binding protein dodecin-like Flavin-binding protein dodecin-like
e7zsaG1 G:69-171 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e7zsah1 h:29-122 Histone-like Histone-related Histone
e7zsaH1 H:2-146 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e7zsaI1 I:2-49 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e7zsaI2 I:50-117 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e7zsaJ1 J:1-69 HTH RPB10 RPB10
e7zsaK1 K:1-115 DCoH-like RBP11-like subunits of RNA polymerase RBP11-like subunits of RNA polymerase
e7zsaL1 L:26-70 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e7zsaM1 M:14-58 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e7zsaM3 M:78-230 HTH HTH Cyclin-like
e7zsaM2 M:231-342 HTH HTH Cyclin-like
e7zsaO1 O:60-156 TBP-like TATA-box binding protein-like TATA-box binding protein-like
e7zsaO2 O:157-240 TBP-like TATA-box binding protein-like TATA-box binding protein-like
e7zsaU1 U:3-56 TFIIA, alpha-helical domain TFIIA, alpha-helical domain TFIIA, alpha-helical domain
e7zsaU2 U:229-286 Transcription factor IIA (TFIIA), beta-barrel domain Transcription factor IIA (TFIIA), beta-barrel domain Transcription factor IIA (TFIIA), beta-barrel domain
e7zsaV2 V:5-54 TFIIA, alpha-helical domain TFIIA, alpha-helical domain TFIIA, alpha-helical domain
e7zsaV1 V:55-122 Transcription factor IIA (TFIIA), beta-barrel domain Transcription factor IIA (TFIIA), beta-barrel domain Transcription factor IIA (TFIIA), beta-barrel domain