Domain ID e8b3fL1

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  • A: few secondary structure elements
  • X: Rubredoxin-like
  • H: Rubredoxin-related
  • T: Rubredoxin-related
  • F: DNA_RNApol_7kD
UID: 003067816
Type: Automatic domain
Parent: e1twfL1
Range: L:13-58
Ligands: ZN
PDB: 8b3f
PDB Description:
Species:

Structure of domain e8b3fL1

Domains in the same chain:

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e8b3fL1 L:13-58 Rubredoxin-like Rubredoxin-related Rubredoxin-related

Domains in the same PDB:

e8b3fa1 a:1-365 beta-propeller-like beta-propeller 7-bladed
e8b3fA2 A:11-155,A:182-350 N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit
e8b3fA1 A:351-388,A:450-533 cradle loop barrel RIFT-related double psi
e8b3fA6 A:389-449 MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
e8b3fA5 A:534-685 first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit
e8b3fA3 A:686-894 second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit
e8b3fA9 A:895-1082 helical domain in yeast RNA-polymerases third helical domain in yeast RNA-polymerase II beta-prime subunit third helical domain in yeast RNA-polymerase II beta-prime subunit
e8b3fA4 A:1083-1135,A:1361-1481 central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit
e8b3fA8 A:1136-1164,A:1298-1360 ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e8b3fA7 A:1165-1297 permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e8b3fb2 b:490-757 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e8b3fb1 b:758-1025,b:1383-1399 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e8b3fB7 B:15-67,B:87-200,B:392-528 N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase
e8b3fB5 B:201-391 insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase
e8b3fB1 B:529-618 inserted a+b domain in yeast RNA polymerase beta subunit inserted a+b domain in yeast RNA polymerase beta subunit inserted a+b domain in yeast RNA polymerase beta subunit
e8b3fB3 B:619-768 barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase
e8b3fB6 B:769-805,B:930-1053 cradle loop barrel RIFT-related double psi
e8b3fB4 B:806-929 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e8b3fB2 B:1054-1174 C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase
e8b3fC1 C:2-42,C:179-270 DCoH-like RBP11-like subunits of RNA polymerase RBP11-like subunits of RNA polymerase
e8b3fC2 C:43-178 Ribosomal protein TL5/L25 C-terminal domain-like Insert subdomain of RNA polymerase alpha subunit Insert subdomain of RNA polymerase alpha subunit
e8b3fd3 d:1-355 beta-propeller-like beta-propeller 7-bladed
e8b3fd1 d:356-392,d:709-1044 beta-propeller-like beta-propeller 7-bladed
e8b3fd2 d:1045-1140 HTH HTH tri-helical
e8b3fD1 D:14-141 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e8b3fE1 E:2-138 Restriction endonuclease-like Eukaryotic RPB5 N-terminal domain Eukaryotic RPB5 N-terminal domain
e8b3fE2 E:139-210 RPB5-like RNA polymerase subunit RPB5-like RNA polymerase subunit RPB5-like RNA polymerase subunit
e8b3fF1 F:46-127 RPB6/omega subunit-like RPB6/omega subunit-like RPB6
e8b3fG2 G:1-77 Dodecin subunit-like Flavin-binding protein dodecin-like Flavin-binding protein dodecin-like
e8b3fG1 G:78-171 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e8b3fH1 H:2-149 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e8b3fI2 I:9-59 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e8b3fI1 I:60-125 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e8b3fJ1 J:1-67 HTH RPB10 RPB10
e8b3fK1 K:1-115 DCoH-like RBP11-like subunits of RNA polymerase RBP11-like subunits of RNA polymerase
e8b3fL1 L:13-58 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e8b3fM1 M:20-83 Rubredoxin-like Rubredoxin-related Rubredoxin-related