Domain ID e8bqdBM1

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  • A: beta barrels
  • X: SH3
  • H: SH3
  • T: SH3
  • F: Ribosomal_L6e
UID: 003024329
Type: Automatic domain
Parent: e4v3pLG1
Range: BM:2-176
PDB: 8bqd
PDB Description: 60S ribosomal protein L6-B
Species:

Structure of domain e8bqdBM1

Domains in the same chain:

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e8bqdBM1 BM:2-176 SH3 SH3 SH3

Domains in the same PDB:

e8bqda1 a:1-87 40S ribosomal protein rpS21 (S21e) 40S ribosomal protein rpS21 (S21e) 40S ribosomal protein rpS21 (S21e)
e8bqdA1 A:4-91 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e8bqdA2 A:92-225 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e8bqdAA1 AA:24-256 Bacillus chorismate mutase-like L30e-like L30e-like
e8bqdAB1 AB:2-137 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e8bqdAC1 AC:2-100 60S ribosomal protein rpL36 (L36e) 60S ribosomal protein rpL36 (L36e) 60S ribosomal protein rpL36 (L36e)
e8bqdAD2 AD:1-85 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e8bqdAD1 AD:86-191 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e8bqdAE1 AE:1-126 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e8bqdAF1 AF:2-82 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e8bqdAG1 AG:6-174 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e8bqdAH1 AH:22-142 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e8bqdAI1 AI:2-78 SRP9/14-like Signal recognition particle alu RNA binding heterodimer SRP9/14-related Signal recognition particle alu RNA binding heterodimer SRP9/14-related
e8bqdAJ1 AJ:2-194 RPL13 RPL13 RPL13
e8bqdAK1 AK:2-126 SH3 SH3 SH3
e8bqdAL1 AL:2-51 Ribosomal protein L39e Ribosomal protein L39e Ribosomal protein L39e
e8bqdAM1 AM:3-138 SH3 SH3 SH3
e8bqdAN1 AN:2-136 SH3 SH3 SH3
e8bqdAO1 AO:77-128 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e8bqdAP1 AP:2-104 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e8bqdAQ1 AQ:2-204 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e8bqdAR1 AR:2-149 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
e8bqdAS1 AS:1-25 Ribosomal protein L41-A Ribosomal protein L41-A Ribosomal protein L41-A
e8bqdAT1 AT:2-92 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e8bqdAU1 AU:3-199 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e8bqdAV1 AV:2-59 RPL29 RPL29 RPL29
e8bqdAW1 AW:2-98 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e8bqdAW2 AW:99-252 SH3 SH3 SH3
e8bqdAX1 AX:2-184 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e8bqdAY1 AY:9-104 Bacillus chorismate mutase-like L30e-like L30e-like
e8bqdb2 b:2-67 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e8bqdb1 b:68-130 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e8bqdB1 B:20-225 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e8bqdBA1 BA:2-387 cradle loop barrel RIFT-related Alanine racemase-C
e8bqdBB1 BB:2-186 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
e8bqdBC1 BC:4-112 Ribosomal protein L31e-like Ribosomal protein L31e/gp120 outer domain Ribosomal protein L31e/gp120 outer domain
e8bqdBD1 BD:2-219 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal protein L10e
e8bqdBE1 BE:2-269 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e8bqdBE2 BE:270-362 C-terminal helical region in 60S ribosomal protein L4 (L4p) C-terminal helical region in 60S ribosomal protein L4 (L4p) C-terminal helical region in 60S ribosomal protein L4 (L4p)
e8bqdBF2 BF:57-189 Ribosomal protein L19 (L19e) C-terminal domain Ribosomal protein L19 (L19e) C-terminal domain Ribosomal protein L19 (L19e) C-terminal domain
e8bqdBF1 BF:2-56 Ribosomal protein L19 (L19e) N-terminal domain Ribosomal protein L19 (L19e) N-terminal domain Ribosomal protein L19 (L19e) N-terminal domain
e8bqdBG1 BG:2-128 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L32e Ribosomal protein L32e
e8bqdBH2 BH:70-172 GP2-like RplX-like RplX-like
e8bqdBH1 BH:2-69 GP2-like RplX-like RplX-like
e8bqdBI1 BI:4-297 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e8bqdBJ1 BJ:2-160 SH3 SH3 SH3
e8bqdBK1 BK:2-107 cradle loop barrel RIFT-related Alanine racemase-C
e8bqdBL1 BL:9-108 Ribosomal protein L22e Ribosomal protein L22e Ribosomal protein L22e
e8bqdBM1 BM:2-176 SH3 SH3 SH3
e8bqdBN1 BN:2-113 Glucocorticoid receptor-like RPL34 RPL34
e8bqdBO1 BO:23-244 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e
e8bqdBP1 BP:2-120 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e8bqdBT1 BT:1-56,BT:153-217 a+b domain in Ribosomal protein L1 a+b domain in Ribosomal protein L1 a+b domain in Ribosomal protein L1
e8bqdBT2 BT:57-152 Flavodoxin-like Rossmann-like domain in Ribosomal protein L1 Rossmann-like domain in Ribosomal protein L1
e8bqdc1 c:2-145 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e8bqdC1 C:1-92 HTH HTH winged
e8bqdd1 d:2-135 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e8bqdD1 D:23-143 Bacillus chorismate mutase-like L30e-like L30e-like
e8bqde1 e:2-98 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e8bqdE1 E:13-129 Ribosomal protein S19 Ribosomal protein S19 Ribosomal protein S19
e8bqdf1 f:2-82 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e8bqdF1 F:3-143 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e8bqdg1 g:2-61 40S ribosomal protein S30 (S30e) 40S ribosomal protein S30 (S30e) 40S ribosomal protein S30 (S30e)
e8bqdG1 G:2-126 HTH HTH FF domain
e8bqdH1 H:2-146 HhH/H2TH H2TH H2TH
e8bqdI1 I:2-144 HTH HTH winged
e8bqdJ1 J:20-119 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e8bqdK1 K:24-105 HTH HTH winged
e8bqdL1 L:5-67 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e8bqdM1 M:4-56 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e8bqdN1 N:80-152 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e8bqdO1 O:5-316 beta-propeller-like beta-propeller 7-bladed
e8bqdP1 P:2-207 Flavodoxin-like Ribosomal protein S2/SIS domain Ribosomal protein S2/SIS domain
e8bqdQ2 Q:2-113 Ribosomal protein L25-like 40S ribosomal protein S3A N-terminal domain 40S ribosomal protein S3A N-terminal domain
e8bqdQ1 Q:114-233 T-fold 40S ribosomal protein S3A C-terminal domain 40S ribosomal protein S3A C-terminal domain
e8bqdR1 R:34-108 N-terminal region in 40S ribosomal protein rpS2 (S5p) N-terminal region in 40S ribosomal protein rpS2 (S5p) N-terminal region in 40S ribosomal protein rpS2 (S5p)
e8bqdR2 R:109-175 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e8bqdR3 R:176-249 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e8bqdS1 S:2-116 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif
e8bqdS2 S:117-175 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e8bqdS3 S:176-259 SH3 SH3 SH3
e8bqdT1 T:1-228 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e8bqdU2 U:4-105 Alpha-lytic protease prodomain-like 40S ribosomal protein S7-A 40S ribosomal protein S7-A
e8bqdU1 U:106-187 Alpha-lytic protease prodomain-like 40S ribosomal protein S7-A 40S ribosomal protein S7-A
e8bqdV1 V:2-199 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e8bqdW1 W:2-185 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif
e8bqdx2 x:21-73 Glucocorticoid receptor-like HIT/MYND zinc finger-like HIT/MYND zinc finger-like
e8bqdx1 x:74-387 Creatinase/aminopeptidase-like Creatinase/aminopeptidase Creatinase/aminopeptidase
e8bqdX1 X:4-145 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e8bqdY2 Y:2-82 HTH 40S ribosomal protein S13 N-terminal domain 40S ribosomal protein S13 N-terminal domain
e8bqdY1 Y:83-151 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e8bqdZ1 Z:11-137 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like