Domain ID e8cdrJ1

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  • A: a+b two layers
  • X: Alpha-beta plaits
  • H: Ribosomal proteins S24e, L23 and L15e
  • T: Ribosomal proteins S24e, L23 and L15e
  • F: Ribosomal_L23,Ribosomal_L23eN
UID: 003071775
Type: Automatic domain
Parent: e3izsX1
Range: J:23-142
Ligands: MG
PDB: 8cdr
PDB Description: 60S ribosomal protein L25
Species:

Structure of domain e8cdrJ1

Domains in the same chain:

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e8cdrJ1 J:23-142 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e

Domains in the same PDB:

e8cdr01 0:2-135 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e8cdr11 1:36-105 HTH HTH winged
e8cdr21 2:2-98 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e8cdr31 3:2-82 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e8cdr41 4:5-67 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e8cdr51 5:5-56 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e8cdr61 6:7-59 40S ribosomal protein S30 (S30e) 40S ribosomal protein S30 (S30e) 40S ribosomal protein S30 (S30e)
e8cdr71 7:2-319 beta-propeller-like beta-propeller 7-bladed
e8cdr81 8:94-144 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e8cdra1 a:2-103 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e8cdrA1 A:3-199 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e8cdrAa4 Aa:1-44,Aa:71-343 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e8cdrAa1 Aa:344-481 cradle loop barrel RIFT-related Alanine racemase-C
e8cdrAa5 Aa:482-560 Alpha-beta plaits EF-G C-terminal domain-like EF-G C-terminal domain-like
e8cdrAa3 Aa:726-842 Alpha-beta plaits EF-G C-terminal domain-like EF-G C-terminal domain-like
e8cdrAa2 Aa:561-725 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e8cdrb1 b:2-92 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e8cdrB1 B:2-155 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e8cdrC1 C:2-186 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
e8cdrd1 d:2-207 Flavodoxin-like Ribosomal protein S2/SIS domain Ribosomal protein S2/SIS domain
e8cdrD1 D:2-56 Ribosomal protein L19 (L19e) N-terminal domain Ribosomal protein L19 (L19e) N-terminal domain Ribosomal protein L19 (L19e) N-terminal domain
e8cdrD2 D:57-177 Ribosomal protein L19 (L19e) C-terminal domain Ribosomal protein L19 (L19e) C-terminal domain Ribosomal protein L19 (L19e) C-terminal domain
e8cdrDD1 DD:4-107,DD:181-200 Alpha-beta plaits Ribosomal protein L10-like Ribosomal protein L10-like
e8cdrDD2 DD:108-180 Insertion domain in 60S ribosomal protein rpP0 (L10P) Insertion domain in 60S ribosomal protein rpP0 (L10P) Insertion domain in 60S ribosomal protein rpP0 (L10P)
e8cdre2 e:20-113 Ribosomal protein L25-like 40S ribosomal protein S3A N-terminal domain 40S ribosomal protein S3A N-terminal domain
e8cdre1 e:114-231 T-fold 40S ribosomal protein S3A C-terminal domain 40S ribosomal protein S3A C-terminal domain
e8cdrE2 E:1-69 GP2-like RplX-like RplX-like
e8cdrE1 E:70-172 GP2-like RplX-like RplX-like
e8cdrEe1 Ee:74-165 HTH HTH Ribosomal protein L11, C-terminal domain
e8cdrEe2 Ee:8-73 Ribosomal protein L11/L12e N-terminal domain-like Ribosomal protein L11/L12e N-terminal domain Ribosomal protein L11/L12e N-terminal domain
e8cdrEE2 EE:2-98 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e8cdrEE1 EE:99-253 SH3 SH3 SH3
e8cdrf3 f:34-108 N-terminal region in 40S ribosomal protein rpS2 (S5p) N-terminal region in 40S ribosomal protein rpS2 (S5p) N-terminal region in 40S ribosomal protein rpS2 (S5p)
e8cdrf2 f:109-175 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e8cdrf1 f:176-250 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e8cdrF1 F:2-160 SH3 SH3 SH3
e8cdrFF1 FF:2-387 cradle loop barrel RIFT-related Alanine racemase-C
e8cdrg2 g:6-91 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e8cdrg1 g:92-210 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e8cdrG1 G:12-108 Ribosomal protein L22e Ribosomal protein L22e Ribosomal protein L22e
e8cdrGG2 GG:270-362 C-terminal helical region in 60S ribosomal protein L4 (L4p) C-terminal helical region in 60S ribosomal protein L4 (L4p) C-terminal helical region in 60S ribosomal protein L4 (L4p)
e8cdrGG1 GG:2-269 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e8cdrh3 h:2-116 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif
e8cdrh1 h:117-175 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e8cdrh2 h:176-259 SH3 SH3 SH3
e8cdrH1 H:9-137 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e8cdrHH1 HH:2-297 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e8cdri1 i:20-225 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e8cdrI1 I:1-63 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e8cdrII1 II:2-108,II:129-176 SH3 SH3 SH3
e8cdrj1 j:1-219 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e8cdrJ1 J:23-142 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e8cdrJJ1 JJ:23-244 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e
e8cdrk2 k:4-105 Alpha-lytic protease prodomain-like 40S ribosomal protein S7-A 40S ribosomal protein S7-A
e8cdrk1 k:106-187 Alpha-lytic protease prodomain-like 40S ribosomal protein S7-A 40S ribosomal protein S7-A
e8cdrK1 K:2-127 SH3 SH3 SH3
e8cdrKK1 KK:24-256 Bacillus chorismate mutase-like L30e-like L30e-like
e8cdrl1 l:2-200 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e8cdrL1 L:2-136 SH3 SH3 SH3
e8cdrLL1 LL:86-191 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e8cdrLL2 LL:1-85 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e8cdrm1 m:2-186 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif
e8cdrM1 M:2-149 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
e8cdrMM1 MM:2-216 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal protein L10e
e8cdrn1 n:1-70 HTH HTH winged
e8cdrN1 N:2-59 RPL29 RPL29 RPL29
e8cdrNN1 NN:6-174 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e8cdro1 o:4-145 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e8cdrO1 O:9-105 Bacillus chorismate mutase-like L30e-like L30e-like
e8cdrOO1 OO:2-194 RPL13 RPL13 RPL13
e8cdrp2 p:2-82 HTH 40S ribosomal protein S13 N-terminal domain 40S ribosomal protein S13 N-terminal domain
e8cdrp1 p:83-151 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e8cdrP1 P:4-112 Ribosomal protein L31e-like Ribosomal protein L31e/gp120 outer domain Ribosomal protein L31e/gp120 outer domain
e8cdrPP1 PP:3-138 SH3 SH3 SH3
e8cdrq1 q:11-137 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e8cdrQ1 Q:2-128 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L32e Ribosomal protein L32e
e8cdrQQ1 QQ:2-204 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e8cdrr1 r:16-128 Ribosomal protein S19 Ribosomal protein S19 Ribosomal protein S19
e8cdrR1 R:2-107 cradle loop barrel RIFT-related Alanine racemase-C
e8cdrs1 s:7-143 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e8cdrS1 S:2-110 Glucocorticoid receptor-like RPL34 RPL34
e8cdrt1 t:2-122 HTH HTH FF domain
e8cdrT1 T:2-120 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e8cdru1 u:2-146 HhH/H2TH H2TH H2TH
e8cdrU1 U:24-100 60S ribosomal protein rpL36 (L36e) 60S ribosomal protein rpL36 (L36e) 60S ribosomal protein rpL36 (L36e)
e8cdrv1 v:2-144 HTH HTH winged
e8cdrV1 V:2-85 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e8cdrw1 w:19-118 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e8cdrW1 W:2-78 SRP9/14-like Signal recognition particle alu RNA binding heterodimer SRP9/14-related Signal recognition particle alu RNA binding heterodimer SRP9/14-related
e8cdrx1 x:1-87 40S ribosomal protein rpS21 (S21e) 40S ribosomal protein rpS21 (S21e) 40S ribosomal protein rpS21 (S21e)
e8cdrX1 X:2-51 Ribosomal protein L39e Ribosomal protein L39e Ribosomal protein L39e
e8cdry1 y:2-67 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e8cdry2 y:68-130 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e8cdrY1 Y:77-128 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e8cdrz1 z:2-145 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e8cdrZ1 Z:1-25 Ribosomal protein L41-A Ribosomal protein L41-A Ribosomal protein L41-A