Domain ID e8cenB1

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  • A: a+b complex topology
  • X: inserted a+b domain in yeast RNA polymerase beta subunit
  • H: inserted a+b domain in yeast RNA polymerase beta subunit
  • T: inserted a+b domain in yeast RNA polymerase beta subunit
  • F: RNA_pol_Rpb2_4
UID: 003026228
Type: Automatic domain
Parent: e1twfB7
Range: B:542-630
PDB: 8cen
PDB Description: DNA-directed RNA polymerase II subunit RPB2
Species:

Structure of domain e8cenB1

Domains in the same chain:

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e8cenB3 B:18-218,B:405-541 N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase
e8cenB4 B:219-404 insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase
e8cenB1 B:542-630 inserted a+b domain in yeast RNA polymerase beta subunit inserted a+b domain in yeast RNA polymerase beta subunit inserted a+b domain in yeast RNA polymerase beta subunit
e8cenB6 B:631-813 barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase
e8cenB7 B:814-850,B:975-1097 cradle loop barrel RIFT-related double psi
e8cenB5 B:851-974 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e8cenB2 B:1098-1224 C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase

Domains in the same PDB:

e8cen32 3:9-79 RING/U-box-like RING/U-box-like RING/U-box
e8cen31 3:80-139 beta-beta-alpha zinc fingers beta-beta-alpha zinc fingers beta-beta-alpha zinc fingers
e8cen41 4:21-285 HAD domain-like HAD domain-related vWA-like
e8cen42 4:286-328 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e8cen51 5:2-66 TFB5-related TFB5-related TFB5-related
e8cena1 a:3-52,a:100-206,a:277-288 Mediator of RNA polymerase II transcription subunit 6 Mediator of RNA polymerase II transcription subunit 6 Mediator of RNA polymerase II transcription subunit 6
e8cenb1 b:21-172,b:193-213 Mediator of RNA polymerase II transcription subunit 8 Mediator of RNA polymerase II transcription subunit 8 Mediator of RNA polymerase II transcription subunit 8
e8cenB3 B:18-218,B:405-541 N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase
e8cenB4 B:219-404 insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase
e8cenB1 B:542-630 inserted a+b domain in yeast RNA polymerase beta subunit inserted a+b domain in yeast RNA polymerase beta subunit inserted a+b domain in yeast RNA polymerase beta subunit
e8cenB6 B:631-813 barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase
e8cenB7 B:814-850,B:975-1097 cradle loop barrel RIFT-related double psi
e8cenB5 B:851-974 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e8cenB2 B:1098-1224 C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase
e8cenc1 c:1-111 Mediator of RNA polymerase II transcription subunit 11 Mediator of RNA polymerase II transcription subunit 11 Mediator of RNA polymerase II transcription subunit 11
e8cenC1 C:3-41,C:173-268 DCoH-like RBP11-like subunits of RNA polymerase RBP11-like subunits of RNA polymerase
e8cenC2 C:42-172 Ribosomal protein TL5/L25 C-terminal domain-like Insert subdomain of RNA polymerase alpha subunit Insert subdomain of RNA polymerase alpha subunit
e8cenD1 D:11-71,D:131-220 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e8cene1 e:1-107,e:159-302 mRNA triphosphatase CET1-related mRNA triphosphatase CET1-related mRNA triphosphatase CET1-related
e8cenE1 E:2-142 Restriction endonuclease-like Eukaryotic RPB5 N-terminal domain Eukaryotic RPB5 N-terminal domain
e8cenE2 E:143-215 RPB5-like RNA polymerase subunit RPB5-like RNA polymerase subunit RPB5-like RNA polymerase subunit
e8cenf1 f:2-210 mRNA triphosphatase CET1-related mRNA triphosphatase CET1-related mRNA triphosphatase CET1-related
e8cenF1 F:34-35,F:62-155 RPB6/omega subunit-like RPB6/omega subunit-like RPB6
e8ceng1 g:2-118 Mediator of RNA polymerase II transcription subunit 22 Mediator of RNA polymerase II transcription subunit 22 Mediator of RNA polymerase II transcription subunit 22
e8cenG2 G:1-68 Dodecin subunit-like Flavin-binding protein dodecin-like Flavin-binding protein dodecin-like
e8cenG1 G:69-171 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e8cenH1 H:2-146 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e8ceni2 i:9-83 Mediator of RNA polymerase II transcription submodule Med7N/31 Mediator of RNA polymerase II transcription submodule Med7N/31 Mediator of RNA polymerase II transcription submodule Med7N/31
e8ceni1 i:108-214 Mediator hinge subcomplex-like Mediator hinge subcomplex-like MED7 hinge region
e8cenI2 I:2-49 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e8cenI1 I:50-117 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e8cenJ1 J:1-69 HTH RPB10 RPB10
e8cenK1 K:1-115 DCoH-like RBP11-like subunits of RNA polymerase RBP11-like subunits of RNA polymerase
e8cenL1 L:26-70 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e8cenM3 M:14-58 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e8cenM2 M:78-230 HTH HTH Cyclin-like
e8cenM1 M:231-342 HTH HTH Cyclin-like
e8cenn1 n:3-138 Mediator hinge subcomplex-like Mediator hinge subcomplex-like RNA polymerase II holoenzyme component SRB7 (MED21)
e8ceno1 o:17-126 Mediator of RNA polymerase II transcription submodule Med7N/31 Mediator of RNA polymerase II transcription submodule Med7N/31 Mediator of RNA polymerase II transcription submodule Med7N/31
e8cenO1 O:60-156 TBP-like TATA-box binding protein-like TATA-box binding protein-like
e8cenO2 O:157-240 TBP-like TATA-box binding protein-like TATA-box binding protein-like
e8cenU2 U:3-56 TFIIA, alpha-helical domain TFIIA, alpha-helical domain TFIIA, alpha-helical domain
e8cenU1 U:229-286 Transcription factor IIA (TFIIA), beta-barrel domain Transcription factor IIA (TFIIA), beta-barrel domain Transcription factor IIA (TFIIA), beta-barrel domain
e8cenV1 V:5-54 TFIIA, alpha-helical domain TFIIA, alpha-helical domain TFIIA, alpha-helical domain
e8cenV2 V:55-122 Transcription factor IIA (TFIIA), beta-barrel domain Transcription factor IIA (TFIIA), beta-barrel domain Transcription factor IIA (TFIIA), beta-barrel domain