Domain ID e8h0wB3

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  • A: beta barrels
  • X: cradle loop barrel
  • H: RIFT-related
  • T: double psi
  • F: RNA_pol_Rpb2_6
UID: 002994857
Type: Automatic domain
Parent: e1twfB1
Range: B:814-850,B:975-1097
PDB: 8h0w
PDB Description: DNA-directed RNA polymerase subunit beta
Species:

Structure of domain e8h0wB3

Domains in the same chain:

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e8h0wB1 B:9-57,B:77-121,B:155-209,B:398-534 N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase
e8h0wB6 B:210-397 insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase
e8h0wB5 B:535-623 inserted a+b domain in yeast RNA polymerase beta subunit inserted a+b domain in yeast RNA polymerase beta subunit inserted a+b domain in yeast RNA polymerase beta subunit
e8h0wB7 B:624-655,B:675-813 barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase
e8h0wB3 B:814-850,B:975-1097 cradle loop barrel RIFT-related double psi
e8h0wB4 B:851-974 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e8h0wB2 B:1098-1222 C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase

Domains in the same PDB:

e8h0wa1 a:38-134 Histone-like Histone-related Histone
e8h0wA1 A:2-337 N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit
e8h0wA5 A:338-375,A:437-520 cradle loop barrel RIFT-related double psi
e8h0wA8 A:376-436 MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
e8h0wA6 A:521-663 first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit
e8h0wA9 A:664-872 second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit
e8h0wA3 A:873-1061 helical domain in yeast RNA-polymerases third helical domain in yeast RNA-polymerase II beta-prime subunit third helical domain in yeast RNA-polymerase II beta-prime subunit
e8h0wA7 A:1062-1104,A:1304-1463 central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit
e8h0wA4 A:1105-1133,A:1245-1303 ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e8h0wA2 A:1134-1244 permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e8h0wb1 b:20-102 Histone-like Histone-related Histone
e8h0wB1 B:9-57,B:77-121,B:155-209,B:398-534 N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase
e8h0wB6 B:210-397 insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase
e8h0wB5 B:535-623 inserted a+b domain in yeast RNA polymerase beta subunit inserted a+b domain in yeast RNA polymerase beta subunit inserted a+b domain in yeast RNA polymerase beta subunit
e8h0wB7 B:624-655,B:675-813 barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase
e8h0wB3 B:814-850,B:975-1097 cradle loop barrel RIFT-related double psi
e8h0wB4 B:851-974 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e8h0wB2 B:1098-1222 C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase
e8h0wc1 c:14-118 Histone-like Histone-related Histone
e8h0wC1 C:4-40,C:173-266 DCoH-like RBP11-like subunits of RNA polymerase RBP11-like subunits of RNA polymerase
e8h0wC2 C:41-172 Ribosomal protein TL5/L25 C-terminal domain-like Insert subdomain of RNA polymerase alpha subunit Insert subdomain of RNA polymerase alpha subunit
e8h0wd1 d:28-122 Histone-like Histone-related Histone
e8h0wD1 D:3-185 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e8h0we1 e:39-135 Histone-like Histone-related Histone
e8h0wE1 E:2-142 Restriction endonuclease-like Eukaryotic RPB5 N-terminal domain Eukaryotic RPB5 N-terminal domain
e8h0wE2 E:143-214 RPB5-like RNA polymerase subunit RPB5-like RNA polymerase subunit RPB5-like RNA polymerase subunit
e8h0wf1 f:25-102 Histone-like Histone-related Histone
e8h0wF1 F:71-154 RPB6/omega subunit-like RPB6/omega subunit-like RPB6
e8h0wg1 g:14-118 Histone-like Histone-related Histone
e8h0wG1 G:1-68 Dodecin subunit-like Flavin-binding protein dodecin-like Flavin-binding protein dodecin-like
e8h0wG2 G:69-171 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e8h0wh1 h:29-121 Histone-like Histone-related Histone
e8h0wH1 H:3-145 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e8h0wI1 I:3-49 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e8h0wI2 I:50-113 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e8h0wJ1 J:1-66 HTH RPB10 RPB10
e8h0wK1 K:1-113 DCoH-like RBP11-like subunits of RNA polymerase RBP11-like subunits of RNA polymerase
e8h0wL1 L:28-72 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e8h0wu1 u:38-110 HTH HTH winged