Citrus Sinensis ID: 006532


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-
MATGVAARTSNFHFGGIRCKGQSCQQASLVSSLTFNGCIQRELSWFLRFQRFNFSHSPVSENWKSLRTVPVLSCLRDGSVKYFDFSVIGSGVAGLCYALEVAKHGTVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDETVRVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFHPTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDERAELAPRDVVARSIDDQLKKRNEKYVLLDISHKPTEKILSHFPNIAAECLKYGLDITSQPIPVVPAAHYMCGGVRAGLQGETNVRGLYVAGEVACTGLHGANRLASNSLLEALVFARRAVQPSIDHKKSTSIDLSASNWWTRTVVPKSLGCNVMHNILRRTKEVRKELQSIMWRYVGIVRSTTSLQTAEWRIDELEAEWETYLFEHGWEQTFVGLEACEMRNLFCCAKLVVSSALARHESRGLHYMVDFPHVEENKRLPTIILPSLVNCTWSSRQLHKLPVC
cccccccccccEEEEEEEEccccccccccccccccccHHHcccccEEEEccccccccccccccccccccccccccccccccEEcEEEEcccHHHHHHHHHccccccEEEEccccccccccccccccEEEEccccccHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHccccEEEEcccEEEEEEccccccccEEEEEEEEEccccEEEEEEEcEEEEEccccccccccccccccccHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccEEEcccccccccccccccccccHHHHHHHHHHHHHHcccccEEEEcccccHHHHHHHcHHHHHHHHHccccccccccccccccccccccEEccccccccccccEEEccccccccccccHHcHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHccccEEEcHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccEEEEccccccccccccccccccc
cccEEEcccccEEEEEEEEEccEEEcccccccccccccccccccHHHHHHHcccccccHHHccccccccccccccccccccEEcEEEEcccHHHHHHHHHHHccccEEEEccccccccHHHHccccEEccccccccHHHHHHHHHHHccccccHHHHHHHHccHHHHHHHHHcccccccccccccEcEEcccccccccEEcccccHHHHHHHHHHHHHHccccEEEEccEEEEEEEEHccccccEEEEEEEEEcccccEEEEEccEEEEcccccHHHcccEccccccccHHHHHHHHccccEEccccEEEEEEEEccccccccccccHHcccEccHHHHHcccEEEcccccEcHHHccccHHHccHHHHHHHHHHHHHHHccccEEEEcccccHHHHHHHcHHHHHHHHccccccccccEEEEEEEEEEccEEEcccccEcccEcEEEccccEEccccccccccccHHHHHHHHHHHHHHHHHHHHHHcccEEccccHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHccccEcHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccEccEcEccEcccccHHHcHcEEEcccccEEEEcEcccccccc
matgvaartsnfhfggirckgqscqQASLVSSLTFNGCIQRELSWFLRFqrfnfshspvsenwkslrtvpvlsclrdgsvkyfdfsvigsGVAGLCYALEVAkhgtvavitkaephesntnyaqggvsavlcpsdsveshmQDTIVAGaylcddetvRVVCTEGPDRIRELIAIGasfdrgedgnlhlaregghshhRIVHAADMTGREIERALLEAvvsdpnisvfeHHFAIDLlttldgpdavchgvdtLNVETQEVVRFISKVTLLasggaghiypsttnplvatgdgMAMAHRAQAVIsnmefvqfhptaladeglpikpkktrenSFLITEavrgdggilynlgmerfmplyderaelaprdvVARSIDDQLKKRNEKYVLLdishkptekilshFPNIAAECLKYglditsqpipvvpaahymcggvraglqgetnvrGLYVAGEVactglhganrlASNSLLEALVFARRavqpsidhkkstsidlsasnwwtrtvvpkslgcnvmHNILRRTKEVRKELQSIMWRYVGIVRSTTSLQTAEWRIDELEAEWETYLFEHGWEQTFVGLEACEMRNLFCCAKLVVSSALarhesrglhymvdfphveenkrlptiilpslvnctwssrqlhklpvc
matgvaartsnfhfggirckGQSCQQASLVSSLTFNGCIQRELSWFLRFQRFNFshspvsenwkslrTVPVLSCLRDGSVKYFDFSVIGSGVAGLCYALEVAKHGTVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDETVRVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFHPTaladeglpikpkktrensfliteavrgdggilYNLGMERFMPLYDERAELAPRDVVARsiddqlkkrneKYVLLDISHKPTEKILSHFPNIAAECLKYGLDITSQPIPVVPAAHYMCGGVRAGLQGETNVRGLYVAGEVACTGLHGANRLASNSLLEALVFARRAvqpsidhkkstsidlsasnwwtrtvvpkslgcnvmhnILRRTKEVRKELQSIMWRyvgivrsttslqtAEWRIDELEAEWETYLFEHGWEQTFVGLEACEMRNLFCCAKLVVSSALARHESRGLHYMVDFPHVEENKRLPTIILPslvnctwssrqlhklpvc
MATGVAARTSNFHFGGIRCKGQSCQQASLVSSLTFNGCIQRELSWFLRFQRFNFSHSPVSENWKSLRTVPVLSCLRDGSVKYFDFSVIGSGVAGLCYALEVAKHGTVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDETVRVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFHPTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDERAELAPRDVVARSIDDQLKKRNEKYVLLDISHKPTEKILSHFPNIAAECLKYGLDITSQPIPVVPAAHYMCGGVRAGLQGETNVRGLYVAGEVACTGLHGANRLASNSLLEALVFARRAVQPSIDHKKSTSIDLSASNWWTRTVVPKSLGCNVMHNILRRTKEVRKELQSIMWRYVGIVRSTTSLQTAEWRIDELEAEWETYLFEHGWEQTFVGLEACEMRNLFCCAKLVVSSALARHESRGLHYMVDFPHVEENKRLPTIILPSLVNCTWSSRQLHKLPVC
*********SNFHFGGIRCKGQSCQQASLVSSLTFNGCIQRELSWFLRFQRFNFSHSPVSENWKSLRTVPVLSCLRDGSVKYFDFSVIGSGVAGLCYALEVAKHGTVAVITKAE*****TNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDETVRVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFHPTALADEGLPIK****RENSFLITEAVRGDGGILYNLGMERFMPLYDERAELAPRDVVARSIDDQLKKRNEKYVLLDISHKPTEKILSHFPNIAAECLKYGLDITSQPIPVVPAAHYMCGGVRAGLQGETNVRGLYVAGEVACTGLHGANRLASNSLLEALVFARRAVQPSIDHKKSTSIDLSASNWWTRTVVPKSLGCNVMHNILRRTKEVRKELQSIMWRYVGIVRSTTSLQTAEWRIDELEAEWETYLFEHGWEQTFVGLEACEMRNLFCCAKLVVSSALARHESRGLHYMVDFPHVEENKRLPTIILPSLVNCTWSSR********
********TSNFHFGGIRCKGQSCQQASLVSSLTFNGCIQRELSWFLRFQ****************************SVKYFDFSVIGSGVAGLCYALEVAKHGTVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDETVRVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFHPTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDERAELAPRDVVARSIDDQLKKRNEKYVLLDISHKPTEKILSHFPNIAAECLKYGLDITSQPIPVVPAAHYMCGGVRAGLQGETNVRGLYVAGEVACTGLHGANRLASNSLLEALVFARRAVQPSIDHKK**********************CNVMHNILRRTKEVRKELQSIMWRYVGIVRSTTSLQTAEWRIDELEAEWETYLFEHGWEQTFVGLEACEMRNLFCCAKLVVSSALARHESRGLHYMVDFPHVEENKRLPTIILPSLVNCTWSSRQLHKLPV*
MATGVAARTSNFHFGGIRCKGQSCQQASLVSSLTFNGCIQRELSWFLRFQRFNFSHSPVSENWKSLRTVPVLSCLRDGSVKYFDFSVIGSGVAGLCYALEVAKHGTVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDETVRVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFHPTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDERAELAPRDVVARSIDDQLKKRNEKYVLLDISHKPTEKILSHFPNIAAECLKYGLDITSQPIPVVPAAHYMCGGVRAGLQGETNVRGLYVAGEVACTGLHGANRLASNSLLEALVFARRAVQPSIDHKKSTSIDLSASNWWTRTVVPKSLGCNVMHNILRRTKEVRKELQSIMWRYVGIVRSTTSLQTAEWRIDELEAEWETYLFEHGWEQTFVGLEACEMRNLFCCAKLVVSSALARHESRGLHYMVDFPHVEENKRLPTIILPSLVNCTWSSR********
*ATGVAARTSNFHFGGIRCKGQSCQQASLVSSLTFNGCIQRELSWFLRFQRFNFSHSPVSENWKSLRTVPVLSCLRDGSVKYFDFSVIGSGVAGLCYALEVAKHGTVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDETVRVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFHPTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDERAELAPRDVVARSIDDQLKKRNEKYVLLDISHKPTEKILSHFPNIAAECLKYGLDITSQPIPVVPAAHYMCGGVRAGLQGETNVRGLYVAGEVACTGLHGANRLASNSLLEALVFARRAVQPSIDHKKSTSIDLSASNWWTRTVVPKSLGCNVMHNILRRTKEVRKELQSIMWRYVGIVRSTTSLQTAEWRIDELEAEWETYLFEHGWEQTFVGLEACEMRNLFCCAKLVVSSALARHESRGLHYMVDFPHVEENKRLPTIILPSLVNCTWSSRQLHK***C
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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MATGVAARTSNFHFGGIRCKGQSCQQASLVSSLTFNGCIQRELSWFLRFQRFNFSHSPVSENWKSLRTVPVLSCLRDGSVKYFDFSVIGSGVAGLCYALEVAKHGTVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDETVRVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFHPTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDERAELAPRDVVARSIDDQLKKRNEKYVLLDISHKPTEKILSHFPNIAAECLKYGLDITSQPIPVVPAAHYMCGGVRAGLQGETNVRGLYVAGEVACTGLHGANRLASNSLLEALVFARRAVQPSIDHKKSTSIDLSASNWWTRTVVPKSLGCNVMHNILRRTKEVRKELQSIMWRYVGxxxxxxxxxxxxxxxxxxxxxWETYLFEHGWEQTFVGLEACEMRNLFCCAKLVVSSALARHESRGLHYMVDFPHVEENKRLPTIILPSLVNCTWSSRQLHKLPVC
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query641 2.2.26 [Sep-21-2011]
Q8XWM7533 L-aspartate oxidase 1 OS= yes no 0.809 0.973 0.470 1e-125
Q51363538 L-aspartate oxidase OS=Ps yes no 0.809 0.964 0.448 1e-121
Q9KPA4535 L-aspartate oxidase OS=Vi yes no 0.803 0.962 0.446 1e-118
Q8ZD80533 L-aspartate oxidase OS=Ye yes no 0.804 0.968 0.430 1e-113
Q8ZMX9540 L-aspartate oxidase OS=Sa yes no 0.817 0.970 0.426 1e-111
P10902540 L-aspartate oxidase OS=Es N/A no 0.815 0.968 0.422 1e-110
Q8Z4K0540 L-aspartate oxidase OS=Sa N/A no 0.815 0.968 0.426 1e-110
Q8XA23540 L-aspartate oxidase OS=Es N/A no 0.801 0.951 0.427 1e-109
Q8XQG4536 L-aspartate oxidase 2 OS= no no 0.794 0.949 0.403 6e-99
Q9K107502 L-aspartate oxidase OS=Ne yes no 0.772 0.986 0.411 3e-96
>sp|Q8XWM7|NADB1_RALSO L-aspartate oxidase 1 OS=Ralstonia solanacearum (strain GMI1000) GN=nadB1 PE=3 SV=1 Back     alignment and function desciption
 Score =  449 bits (1154), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 257/546 (47%), Positives = 324/546 (59%), Gaps = 27/546 (4%)

Query: 83  FDFSVIGSGVAGLCYALEVAKHGTVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQ 142
           FD +V+GSG+AGL  AL +A H  V VI+K    E  +++AQGG++AVL  +DS + H+ 
Sbjct: 3   FDVAVVGSGLAGLTVALHLADHRRVVVISKRTLPEGASDWAQGGIAAVLDSNDSHDEHVD 62

Query: 143 DTIVAGAYLCDDETVRVVCTEGPDRIRELIAIGASFDRGEDGNL--HLAREGGHSHHRIV 200
           DT++AGA LCD+   R +   G   I  LI  G  F R     L  HL REGGH H RI+
Sbjct: 63  DTLIAGAGLCDEAATRYIVENGRAAIEWLIGHGVPFTRDARAELGFHLTREGGHRHRRII 122

Query: 201 HAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLT--TLDGPDAVCHGVDTLNVETQE 258
           HAAD TG  +   L++ V + PNI++ E HFAIDL+T   L  P   CHG+  L+ +  +
Sbjct: 123 HAADATGHAVVTTLVDKVRAHPNITLLEDHFAIDLVTDAKLGLPGMRCHGLYVLDCKRGD 182

Query: 259 VVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFHPTALADE 318
           V   I+  T+LA+GGAG +Y  TTNP  ATGDG+AMA RA   ++NMEF+QFHPT L   
Sbjct: 183 VKTIIASQTVLATGGAGKVYLYTTNPDTATGDGIAMAWRAGCRVANMEFIQFHPTCL--- 239

Query: 319 GLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDERAELAPRDVVARSIDDQLK 378
                       SFLI+EAVRG+GG L      RFMP +DERAELAPRD+VAR+ID ++K
Sbjct: 240 ------YHPFAKSFLISEAVRGEGGKLVLPDGTRFMPAHDERAELAPRDIVARAIDFEMK 293

Query: 379 KRNEKYVLLDISHKPTEKILSHFPNIAAECLKYGLDITSQPIPVVPAAHYMCGGVRAGLQ 438
           KR    V LDISH+    I  HFP I A CL+ G+DIT QPIPVVPAAHY CGGV     
Sbjct: 294 KRGLDCVYLDISHQSPAFIQEHFPTILARCLELGIDITRQPIPVVPAAHYTCGGVVTDQL 353

Query: 439 GETNVRGLYVAGEVACTGLHGANRLASNSLLEALVFARRAVQPSIDHKKSTSIDLSASNW 498
           G T++ GLY  GE A TGLHGANRLASNSLLE +V  R A Q  +    +         W
Sbjct: 354 GRTDIAGLYAVGETAYTGLHGANRLASNSLLECMVIGRGAAQDILGQPATAPTPTPIPAW 413

Query: 499 WTRTVVPKSLGCNVMHNILRRTKEVRKELQSIMWRYVGIVRSTTSLQTAEWRIDELEAEW 558
               V        V HN          EL+ +MW YVGIVR+   L+ A+ RI  L  E 
Sbjct: 414 DESRVTDADEEVVVSHNW--------DELRRMMWNYVGIVRTNKRLERAQHRIALLREEI 465

Query: 559 ETYLFEHGWEQTFVGLEACEMRNLFCCAKLVVSSALARHESRGLHYMVDFPHVEENKRLP 618
             Y     +    V  +  E+RNL   A L+V SAL+RHESRGLH+  D+P     K LP
Sbjct: 466 AEY-----YANFRVSHDLLELRNLVEAASLIVDSALSRHESRGLHFSRDYPQTLP-KALP 519

Query: 619 TIILPS 624
           T++ P+
Sbjct: 520 TVMQPA 525




Catalyzes the oxidation of L-aspartate to iminoaspartate.
Ralstonia solanacearum (strain GMI1000) (taxid: 267608)
EC: 1EC: .EC: 4EC: .EC: 3EC: .EC: 1EC: 6
>sp|Q51363|NADB_PSEAE L-aspartate oxidase OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=nadB PE=3 SV=1 Back     alignment and function description
>sp|Q9KPA4|NADB_VIBCH L-aspartate oxidase OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) GN=nadB PE=3 SV=2 Back     alignment and function description
>sp|Q8ZD80|NADB_YERPE L-aspartate oxidase OS=Yersinia pestis GN=nadB PE=3 SV=2 Back     alignment and function description
>sp|Q8ZMX9|NADB_SALTY L-aspartate oxidase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=nadB PE=3 SV=1 Back     alignment and function description
>sp|P10902|NADB_ECOLI L-aspartate oxidase OS=Escherichia coli (strain K12) GN=nadB PE=1 SV=4 Back     alignment and function description
>sp|Q8Z4K0|NADB_SALTI L-aspartate oxidase OS=Salmonella typhi GN=nadB PE=3 SV=1 Back     alignment and function description
>sp|Q8XA23|NADB_ECO57 L-aspartate oxidase OS=Escherichia coli O157:H7 GN=nadB PE=3 SV=1 Back     alignment and function description
>sp|Q8XQG4|NADB2_RALSO L-aspartate oxidase 2 OS=Ralstonia solanacearum (strain GMI1000) GN=nadB2 PE=3 SV=1 Back     alignment and function description
>sp|Q9K107|NADB_NEIMB L-aspartate oxidase OS=Neisseria meningitidis serogroup B (strain MC58) GN=nadB PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query641
225452458647 PREDICTED: L-aspartate oxidase 1-like [V 0.992 0.982 0.826 0.0
224055531601 predicted protein [Populus trichocarpa] 0.925 0.986 0.877 0.0
255552562655 l-aspartate oxidase, putative [Ricinus c 0.992 0.970 0.796 0.0
449483753646 PREDICTED: L-aspartate oxidase-like [Cuc 0.996 0.989 0.768 0.0
449450109646 PREDICTED: L-aspartate oxidase-like [Cuc 0.996 0.989 0.766 0.0
356511664647 PREDICTED: L-aspartate oxidase 1-like [G 0.995 0.986 0.752 0.0
18417469651 L-aspartate oxidase [Arabidopsis thalian 0.967 0.952 0.771 0.0
357496009645 L-aspartate oxidase [Medicago truncatula 0.990 0.984 0.737 0.0
297807493641 L-aspartate oxidase [Arabidopsis lyrata 0.968 0.968 0.756 0.0
270342121667 L-aspartate oxidase [Phaseolus vulgaris] 0.995 0.956 0.740 0.0
>gi|225452458|ref|XP_002274361.1| PREDICTED: L-aspartate oxidase 1-like [Vitis vinifera] Back     alignment and taxonomy information
 Score = 1092 bits (2825), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 532/644 (82%), Positives = 573/644 (88%), Gaps = 8/644 (1%)

Query: 1   MATGVAARTSNFHFGGIRCKGQSCQQASLVSSLTFNGCIQRELS---WF---LRFQRFNF 54
           M T VAA +S  HF    C+GQSC QAS VS +TF GC Q+ LS   W    L+ QR NF
Sbjct: 1   MTTAVAAGSSKLHFRETVCRGQSCGQASWVSGVTFKGCPQKGLSGSSWVSKVLQIQRRNF 60

Query: 55  SHSPVSENWKSLRTVPVLSCLRDGSVKYFDFSVIGSGVAGLCYALEVAKHGTVAVITKAE 114
             S +++NWK LR V   S L+DGSVKYFDF+VIGSGVAGL YALEVAKHG+VAVITKAE
Sbjct: 61  RQSSINDNWKPLRAVSA-SYLKDGSVKYFDFAVIGSGVAGLRYALEVAKHGSVAVITKAE 119

Query: 115 PHESNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDETVRVVCTEGPDRIRELIAI 174
           PHESNTNYAQGGVSAVLCP DSVESHM+DTI+AGAYLCD+ETVRVVCTEGPDRIRELIA+
Sbjct: 120 PHESNTNYAQGGVSAVLCPLDSVESHMRDTIIAGAYLCDEETVRVVCTEGPDRIRELIAM 179

Query: 175 GASFDRGEDGNLHLAREGGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAID 234
           GASFD GEDGNLHLAREGGHSHHRIVHAADMTGREIERALLEAVV+DPNI +FEHHFAID
Sbjct: 180 GASFDHGEDGNLHLAREGGHSHHRIVHAADMTGREIERALLEAVVNDPNIFMFEHHFAID 239

Query: 235 LLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAM 294
           LLT+ DG D VCHGVDTLN ETQEVVRFI+KV LLASGGAGHIYP+TTNPLVATGDG+AM
Sbjct: 240 LLTSQDGSDTVCHGVDTLNTETQEVVRFIAKVILLASGGAGHIYPTTTNPLVATGDGIAM 299

Query: 295 AHRAQAVISNMEFVQFHPTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFM 354
           AHRAQAVISNMEFVQFHPTALADEGLPI P KTREN+FLITEAVRGDGGILYNL MERFM
Sbjct: 300 AHRAQAVISNMEFVQFHPTALADEGLPITPAKTRENAFLITEAVRGDGGILYNLSMERFM 359

Query: 355 PLYDERAELAPRDVVARSIDDQLKKRNEKYVLLDISHKPTEKILSHFPNIAAECLKYGLD 414
           PLYDERAELAPRDVVARSIDDQLKKRNEKYVLLDISHKP EKILSHFPNIAAECLKYGLD
Sbjct: 360 PLYDERAELAPRDVVARSIDDQLKKRNEKYVLLDISHKPKEKILSHFPNIAAECLKYGLD 419

Query: 415 ITSQPIPVVPAAHYMCGGVRAGLQGETNVRGLYVAGEVACTGLHGANRLASNSLLEALVF 474
           IT QPIPVVPAAHYMCGGVRAGLQGETNVRGLYVAGEVACTGLHGANRLASNSLLEALVF
Sbjct: 420 ITRQPIPVVPAAHYMCGGVRAGLQGETNVRGLYVAGEVACTGLHGANRLASNSLLEALVF 479

Query: 475 ARRAVQPSIDHKKSTSIDLSASNWWTRTVVPKSLGCNVMHNILRRTKEVRKELQSIMWRY 534
           ARRAVQPSIDH  ++++DLSASNWW   VVP SLG N+M+++L  T++VRKELQSIMW+Y
Sbjct: 480 ARRAVQPSIDHMSNSTLDLSASNWWAEPVVPTSLGSNIMNDVLSGTRKVRKELQSIMWKY 539

Query: 535 VGIVRSTTSLQTAEWRIDELEAEWETYLFEHGWEQTFVGLEACEMRNLFCCAKLVVSSAL 594
           VGIVRST  L+TAE RI ELEA+WE YLF+ GWE T VGLEACEMRNLFCCAKLVVSSAL
Sbjct: 540 VGIVRSTRRLKTAEQRIAELEAKWEQYLFQQGWEPTMVGLEACEMRNLFCCAKLVVSSAL 599

Query: 595 ARHESRGLHYMVDFPHVEENKRLPTIILP-SLVNCTWSSRQLHK 637
           ARHESRGLHY +DFPH+ E+KRLPT+I P S +N TWSSRQLH 
Sbjct: 600 ARHESRGLHYTIDFPHLVESKRLPTVIFPCSPMNGTWSSRQLHN 643




Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224055531|ref|XP_002298525.1| predicted protein [Populus trichocarpa] gi|222845783|gb|EEE83330.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255552562|ref|XP_002517324.1| l-aspartate oxidase, putative [Ricinus communis] gi|223543335|gb|EEF44866.1| l-aspartate oxidase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|449483753|ref|XP_004156680.1| PREDICTED: L-aspartate oxidase-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449450109|ref|XP_004142806.1| PREDICTED: L-aspartate oxidase-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356511664|ref|XP_003524543.1| PREDICTED: L-aspartate oxidase 1-like [Glycine max] Back     alignment and taxonomy information
>gi|18417469|ref|NP_568304.1| L-aspartate oxidase [Arabidopsis thaliana] gi|15010650|gb|AAK73984.1| AT5g14760/T9L3_60 [Arabidopsis thaliana] gi|24111279|gb|AAN46763.1| At5g14760/T9L3_60 [Arabidopsis thaliana] gi|332004691|gb|AED92074.1| L-aspartate oxidase [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|357496009|ref|XP_003618293.1| L-aspartate oxidase [Medicago truncatula] gi|355493308|gb|AES74511.1| L-aspartate oxidase [Medicago truncatula] Back     alignment and taxonomy information
>gi|297807493|ref|XP_002871630.1| L-aspartate oxidase [Arabidopsis lyrata subsp. lyrata] gi|297317467|gb|EFH47889.1| L-aspartate oxidase [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|270342121|gb|ACZ74704.1| L-aspartate oxidase [Phaseolus vulgaris] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query641
TAIR|locus:2185480651 AO "L-aspartate oxidase" [Arab 0.982 0.967 0.766 2.5e-255
TIGR_CMR|GSU_1827531 GSU_1827 "L-aspartate oxidase" 0.790 0.954 0.483 5.1e-122
UNIPROTKB|Q9KPA4535 nadB "L-aspartate oxidase" [Vi 0.801 0.960 0.450 3e-108
TIGR_CMR|VC_2469535 VC_2469 "L-aspartate oxidase" 0.801 0.960 0.450 3e-108
TIGR_CMR|CPS_4130532 CPS_4130 "L-aspartate oxidase" 0.804 0.969 0.443 6.3e-108
TIGR_CMR|SO_1341537 SO_1341 "L-aspartate oxidase" 0.806 0.962 0.444 1.2e-106
TIGR_CMR|CBU_0101536 CBU_0101 "L-aspartate oxidase" 0.789 0.944 0.453 5.3e-104
UNIPROTKB|P10902540 nadB [Escherichia coli K-12 (t 0.798 0.948 0.436 3.7e-103
TIGR_CMR|CHY_2373519 CHY_2373 "L-aspartate oxidase" 0.438 0.541 0.501 2e-71
TIGR_CMR|SPO_3244516 SPO_3244 "L-aspartate oxidase, 0.616 0.765 0.398 6.8e-71
TAIR|locus:2185480 AO "L-aspartate oxidase" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2458 (870.3 bits), Expect = 2.5e-255, P = 2.5e-255
 Identities = 499/651 (76%), Positives = 549/651 (84%)

Query:     1 MATGVAA-RTSNFHFGGIRCKGQSCQQASLVSSLTFNGCIQRELSW----F--LRFQRFN 53
             MA  V+     NF+  G   +GQ+    S  S+ TF     +E SW    F  L+ +R  
Sbjct:     1 MAAHVSTGNIHNFYLAGQVYRGQAF---SWSSASTFMANPFKEPSWSSGVFKALKAERCG 57

Query:    54 -FSH--SPVSENWKSLRTVPVLSCLRDGSVKYFDFSVIGSGVAGLCYALEVAKHGTVAVI 110
              +S   SP+SE  K +R V V S     S KY+DF+VIGSGVAGL YALEVAK GTVAVI
Sbjct:    58 CYSRGISPISETSKPIRAVSVSS-----STKYYDFTVIGSGVAGLRYALEVAKQGTVAVI 112

Query:   111 TKAEPHESNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDETVRVVCTEGPDRIRE 170
             TK EPHESNTNYAQGGVSAVLCP DSVESHM+DT+VAGA+LCD+ETVRVVCTEGP+RIRE
Sbjct:   113 TKDEPHESNTNYAQGGVSAVLCPLDSVESHMRDTMVAGAHLCDEETVRVVCTEGPERIRE 172

Query:   171 LIAIGASFDRGEDGNLHLAREGGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHH 230
             LIA+GASFD GEDGNLHLAREGGHSH RIVHAADMTGREIERALLEAV++DPNISVF+HH
Sbjct:   173 LIAMGASFDHGEDGNLHLAREGGHSHCRIVHAADMTGREIERALLEAVLNDPNISVFKHH 232

Query:   231 FAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGD 290
             FAIDLLT+ DG + VCHGVDTLN++T EVVRFISKVTLLASGGAGHIYPSTTNPLVATGD
Sbjct:   233 FAIDLLTSQDGLNTVCHGVDTLNIKTNEVVRFISKVTLLASGGAGHIYPSTTNPLVATGD 292

Query:   291 GMAMAHRAQAVISNMEFVQFHPTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGM 350
             GMAMAHRAQAVISNMEFVQFHPTALADEGLPIK +  REN+FLITEAVRGDGGILYNLGM
Sbjct:   293 GMAMAHRAQAVISNMEFVQFHPTALADEGLPIKLQTARENAFLITEAVRGDGGILYNLGM 352

Query:   351 ERFMPLYDERAELAPRDVVARSIDDQLKKRNEKYVLLDISHKPTEKILSHFPNIAAECLK 410
             ERFMP+YDERAELAPRDVVARSIDDQLKKRNEKYVLLDISHKP EKIL+HFPNIA+ECLK
Sbjct:   353 ERFMPVYDERAELAPRDVVARSIDDQLKKRNEKYVLLDISHKPREKILAHFPNIASECLK 412

Query:   411 YGLDITSQPIPVVPAAHYMCGGVRAGLQGETNVRGLYVAGEVACTGLHGANRLASNSLLE 470
             +GLDIT QPIPVVPAAHYMCGGVRAGLQGETNV GL+VAGEVACTGLHGANRLASNSLLE
Sbjct:   413 HGLDITRQPIPVVPAAHYMCGGVRAGLQGETNVLGLFVAGEVACTGLHGANRLASNSLLE 472

Query:   471 ALVFARRAVQPSIDHKKSTSIDLSASNWWTRTVVPKS--LGCNVMHNILRRTKEVRKELQ 528
             ALVFARRAVQPS +  K T +D+ AS  WTR VV  +  LG  V+  I+  TKEVR+ELQ
Sbjct:   473 ALVFARRAVQPSTELMKRTRLDVCASEKWTRPVVATARLLGDEVIAKIIALTKEVRRELQ 532

Query:   529 SIMWRYVGIVRSTTSLQTAEWRIDELEAEWETYLFEHGWEQTFVGLEACEMRNLFCCAKL 588
              +MW+YVGIVRST  L TAE +I ELEA+WET+LFEHGWEQT V LEACEMRNLFCCAKL
Sbjct:   533 EVMWKYVGIVRSTIRLTTAERKIAELEAKWETFLFEHGWEQTVVALEACEMRNLFCCAKL 592

Query:   589 VVSSALARHESRGLHYMVDFPHVEENKRLPTIILPSL-VNCTWSSRQLHKL 638
             VVSSALARHESRGLHYM DFP VEE+KR+PTIILPS     +WSSR+L  +
Sbjct:   593 VVSSALARHESRGLHYMTDFPFVEESKRIPTIILPSSPTTASWSSRRLQNI 643




GO:0005737 "cytoplasm" evidence=IEA
GO:0005739 "mitochondrion" evidence=ISM
GO:0008734 "L-aspartate oxidase activity" evidence=IEA;ISS
GO:0009055 "electron carrier activity" evidence=IEA
GO:0009435 "NAD biosynthetic process" evidence=IEA;IGI;ISS;IMP
GO:0016491 "oxidoreductase activity" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0009507 "chloroplast" evidence=IDA
TIGR_CMR|GSU_1827 GSU_1827 "L-aspartate oxidase" [Geobacter sulfurreducens PCA (taxid:243231)] Back     alignment and assigned GO terms
UNIPROTKB|Q9KPA4 nadB "L-aspartate oxidase" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)] Back     alignment and assigned GO terms
TIGR_CMR|VC_2469 VC_2469 "L-aspartate oxidase" [Vibrio cholerae O1 biovar El Tor (taxid:686)] Back     alignment and assigned GO terms
TIGR_CMR|CPS_4130 CPS_4130 "L-aspartate oxidase" [Colwellia psychrerythraea 34H (taxid:167879)] Back     alignment and assigned GO terms
TIGR_CMR|SO_1341 SO_1341 "L-aspartate oxidase" [Shewanella oneidensis MR-1 (taxid:211586)] Back     alignment and assigned GO terms
TIGR_CMR|CBU_0101 CBU_0101 "L-aspartate oxidase" [Coxiella burnetii RSA 493 (taxid:227377)] Back     alignment and assigned GO terms
UNIPROTKB|P10902 nadB [Escherichia coli K-12 (taxid:83333)] Back     alignment and assigned GO terms
TIGR_CMR|CHY_2373 CHY_2373 "L-aspartate oxidase" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)] Back     alignment and assigned GO terms
TIGR_CMR|SPO_3244 SPO_3244 "L-aspartate oxidase, putative" [Ruegeria pomeroyi DSS-3 (taxid:246200)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9KPA4NADB_VIBCH1, ., 4, ., 3, ., 1, 60.44620.80340.9626yesno
Q8XWM7NADB1_RALSO1, ., 4, ., 3, ., 1, 60.47060.80960.9737yesno
Q8ZD80NADB_YERPE1, ., 4, ., 3, ., 1, 60.43060.80490.9681yesno
Q51363NADB_PSEAE1, ., 4, ., 3, ., 1, 60.44820.80960.9646yesno
Q8ZMX9NADB_SALTY1, ., 4, ., 3, ., 1, 60.42680.81740.9703yesno

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer1.4.3.160.914
3rd Layer1.4.30.691

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query641
PLN02815594 PLN02815, PLN02815, L-aspartate oxidase 0.0
COG0029518 COG0029, NadB, Aspartate oxidase [Coenzyme metabol 0.0
PRK09077536 PRK09077, PRK09077, L-aspartate oxidase; Provision 0.0
TIGR00551488 TIGR00551, nadB, L-aspartate oxidase 1e-171
PRK07804541 PRK07804, PRK07804, L-aspartate oxidase; Provision 1e-169
PRK07395553 PRK07395, PRK07395, L-aspartate oxidase; Provision 1e-163
PRK08071510 PRK08071, PRK08071, L-aspartate oxidase; Provision 1e-150
PRK07512513 PRK07512, PRK07512, L-aspartate oxidase; Provision 1e-143
COG1053562 COG1053, SdhA, Succinate dehydrogenase/fumarate re 1e-134
PRK06263543 PRK06263, sdhA, succinate dehydrogenase flavoprote 1e-133
TIGR01812541 TIGR01812, sdhA_frdA_Gneg, succinate dehydrogenase 1e-132
PRK06175433 PRK06175, PRK06175, L-aspartate oxidase; Provision 1e-124
PRK06069577 PRK06069, sdhA, succinate dehydrogenase flavoprote 1e-115
PRK08205583 PRK08205, sdhA, succinate dehydrogenase flavoprote 1e-111
TIGR01816565 TIGR01816, sdhA_forward, succinate dehydrogenase, 1e-110
PRK07057591 PRK07057, sdhA, succinate dehydrogenase flavoprote 1e-100
PTZ00139617 PTZ00139, PTZ00139, Succinate dehydrogenase [ubiqu 3e-97
PRK06452566 PRK06452, sdhA, succinate dehydrogenase flavoprote 5e-95
PRK05945575 PRK05945, sdhA, succinate dehydrogenase flavoprote 1e-94
PRK09231582 PRK09231, PRK09231, fumarate reductase flavoprotei 6e-91
TIGR01176580 TIGR01176, fum_red_Fp, fumarate reductase, flavopr 8e-91
PRK05675570 PRK05675, sdhA, succinate dehydrogenase flavoprote 9e-91
PRK08958588 PRK08958, sdhA, succinate dehydrogenase flavoprote 4e-87
PLN00128635 PLN00128, PLN00128, Succinate dehydrogenase [ubiqu 2e-86
PRK09078598 PRK09078, sdhA, succinate dehydrogenase flavoprote 1e-85
pfam00890401 pfam00890, FAD_binding_2, FAD binding domain 3e-85
PRK07803626 PRK07803, sdhA, succinate dehydrogenase flavoprote 7e-85
PRK08401466 PRK08401, PRK08401, L-aspartate oxidase; Provision 3e-73
PRK08626657 PRK08626, PRK08626, fumarate reductase flavoprotei 7e-73
TIGR01811603 TIGR01811, sdhA_Bsu, succinate dehydrogenase or fu 7e-59
PRK08641589 PRK08641, sdhA, succinate dehydrogenase flavoprote 9e-56
TIGR01813439 TIGR01813, flavo_cyto_c, flavocytochrome c 1e-39
PRK07573640 PRK07573, sdhA, succinate dehydrogenase flavoprote 1e-26
PRK06481506 PRK06481, PRK06481, fumarate reductase flavoprotei 2e-26
pfam02910127 pfam02910, Succ_DH_flav_C, Fumarate reductase flav 1e-21
PTZ00306 1167 PTZ00306, PTZ00306, NADH-dependent fumarate reduct 1e-18
PRK13800 897 PRK13800, PRK13800, putative oxidoreductase/HEAT r 1e-08
PRK08275554 PRK08275, PRK08275, putative oxidoreductase; Provi 1e-08
PTZ00306 1167 PTZ00306, PTZ00306, NADH-dependent fumarate reduct 5e-07
PRK08275554 PRK08275, PRK08275, putative oxidoreductase; Provi 4e-05
PRK06854608 PRK06854, PRK06854, adenylylsulfate reductase subu 7e-05
PRK08274466 PRK08274, PRK08274, tricarballylate dehydrogenase; 6e-04
pfam01266234 pfam01266, DAO, FAD dependent oxidoreductase 0.001
PRK06854608 PRK06854, PRK06854, adenylylsulfate reductase subu 0.003
>gnl|CDD|215436 PLN02815, PLN02815, L-aspartate oxidase Back     alignment and domain information
 Score = 1143 bits (2959), Expect = 0.0
 Identities = 460/588 (78%), Positives = 499/588 (84%), Gaps = 3/588 (0%)

Query: 57  SPVSENWKSLRT--VPVLSCLRDGSVKYFDFSVIGSGVAGLCYALEVAKHGTVAVITKAE 114
           S ++   K +        S L D S KYFDF VIGSG+AGL YALEVA++GTVA+ITK E
Sbjct: 2   SAIAATRKPIGAERASSASRLDDESTKYFDFLVIGSGIAGLRYALEVAEYGTVAIITKDE 61

Query: 115 PHESNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDETVRVVCTEGPDRIRELIAI 174
           PHESNTNYAQGGVSAVL PSDSVESHM+DTIVAGA+LCD+ETVRVVCTEGP+R++ELIA+
Sbjct: 62  PHESNTNYAQGGVSAVLDPSDSVESHMRDTIVAGAFLCDEETVRVVCTEGPERVKELIAM 121

Query: 175 GASFDRGEDGNLHLAREGGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAID 234
           GASFD GEDGNLHLAREGGHSHHRIVHAADMTGREIERALLEAV +DPNI+ FEHHFAID
Sbjct: 122 GASFDHGEDGNLHLAREGGHSHHRIVHAADMTGREIERALLEAVKNDPNITFFEHHFAID 181

Query: 235 LLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAM 294
           LLT+ DG   VCHG D L+  T EVVRFISKVTLLASGGAGHIYPSTTNPLVATGDG+AM
Sbjct: 182 LLTSQDGGSIVCHGADVLDTRTGEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGIAM 241

Query: 295 AHRAQAVISNMEFVQFHPTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFM 354
           AHRAQAV+SNMEFVQFHPTALADEGLPIKP K REN+FLITEAVRGDGGILYNL  ERFM
Sbjct: 242 AHRAQAVVSNMEFVQFHPTALADEGLPIKPAKARENAFLITEAVRGDGGILYNLAGERFM 301

Query: 355 PLYDERAELAPRDVVARSIDDQLKKRNEKYVLLDISHKPTEKILSHFPNIAAECLKYGLD 414
           PLYDERAELAPRDVVARSIDDQLKKRNEKYVLLDISHKP E+ILSHFPNIAAECLK GLD
Sbjct: 302 PLYDERAELAPRDVVARSIDDQLKKRNEKYVLLDISHKPREEILSHFPNIAAECLKRGLD 361

Query: 415 ITSQPIPVVPAAHYMCGGVRAGLQGETNVRGLYVAGEVACTGLHGANRLASNSLLEALVF 474
           IT QPIPVVPAAHYMCGGVR GLQGETNV+GLY AGEVACTGLHGANRLASNSLLEALVF
Sbjct: 362 ITKQPIPVVPAAHYMCGGVRTGLQGETNVQGLYAAGEVACTGLHGANRLASNSLLEALVF 421

Query: 475 ARRAVQPSIDHKKSTSIDLSASNWWTRTVVPKSLGCNVMHNILRRTKEVRKELQSIMWRY 534
           ARRAVQPSIDH      D+SA+  W R V P +L  +VM  IL  T  VRKELQ IMW Y
Sbjct: 422 ARRAVQPSIDHMARALRDVSAAAAWARPVAPTALADSVMDEILEWTAVVRKELQRIMWNY 481

Query: 535 VGIVRSTTSLQTAEWRIDELEAEWETYLFEHGWEQTFVGLEACEMRNLFCCAKLVVSSAL 594
           VGIVRST  L+TAE +++ELEAEWE  LF HGW+ T VGLEACEMRNLFC AKLVVSSAL
Sbjct: 482 VGIVRSTERLETAERKLEELEAEWEAILFRHGWKPTMVGLEACEMRNLFCVAKLVVSSAL 541

Query: 595 ARHESRGLHYMVDFPHVEENKRLPTIILPSLV-NCTWSSRQLHKLPVC 641
           AR ESRGLHY  D+P + E++R PT+I PS+    TWSSR LH+    
Sbjct: 542 ARKESRGLHYTTDYPELVESERKPTVIFPSVPTAGTWSSRSLHRPKRG 589


Length = 594

>gnl|CDD|223108 COG0029, NadB, Aspartate oxidase [Coenzyme metabolism] Back     alignment and domain information
>gnl|CDD|236374 PRK09077, PRK09077, L-aspartate oxidase; Provisional Back     alignment and domain information
>gnl|CDD|233018 TIGR00551, nadB, L-aspartate oxidase Back     alignment and domain information
>gnl|CDD|236102 PRK07804, PRK07804, L-aspartate oxidase; Provisional Back     alignment and domain information
>gnl|CDD|236010 PRK07395, PRK07395, L-aspartate oxidase; Provisional Back     alignment and domain information
>gnl|CDD|236147 PRK08071, PRK08071, L-aspartate oxidase; Provisional Back     alignment and domain information
>gnl|CDD|236036 PRK07512, PRK07512, L-aspartate oxidase; Provisional Back     alignment and domain information
>gnl|CDD|223981 COG1053, SdhA, Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion] Back     alignment and domain information
>gnl|CDD|235758 PRK06263, sdhA, succinate dehydrogenase flavoprotein subunit; Reviewed Back     alignment and domain information
>gnl|CDD|233582 TIGR01812, sdhA_frdA_Gneg, succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup Back     alignment and domain information
>gnl|CDD|180442 PRK06175, PRK06175, L-aspartate oxidase; Provisional Back     alignment and domain information
>gnl|CDD|235689 PRK06069, sdhA, succinate dehydrogenase flavoprotein subunit; Reviewed Back     alignment and domain information
>gnl|CDD|236185 PRK08205, sdhA, succinate dehydrogenase flavoprotein subunit; Reviewed Back     alignment and domain information
>gnl|CDD|130875 TIGR01816, sdhA_forward, succinate dehydrogenase, flavoprotein subunit, E Back     alignment and domain information
>gnl|CDD|180814 PRK07057, sdhA, succinate dehydrogenase flavoprotein subunit; Reviewed Back     alignment and domain information
>gnl|CDD|240286 PTZ00139, PTZ00139, Succinate dehydrogenase [ubiquinone] flavoprotein subunit; Provisional Back     alignment and domain information
>gnl|CDD|180567 PRK06452, sdhA, succinate dehydrogenase flavoprotein subunit; Reviewed Back     alignment and domain information
>gnl|CDD|180319 PRK05945, sdhA, succinate dehydrogenase flavoprotein subunit; Reviewed Back     alignment and domain information
>gnl|CDD|236421 PRK09231, PRK09231, fumarate reductase flavoprotein subunit; Validated Back     alignment and domain information
>gnl|CDD|233302 TIGR01176, fum_red_Fp, fumarate reductase, flavoprotein subunit Back     alignment and domain information
>gnl|CDD|180193 PRK05675, sdhA, succinate dehydrogenase flavoprotein subunit; Reviewed Back     alignment and domain information
>gnl|CDD|181594 PRK08958, sdhA, succinate dehydrogenase flavoprotein subunit; Reviewed Back     alignment and domain information
>gnl|CDD|177739 PLN00128, PLN00128, Succinate dehydrogenase [ubiquinone] flavoprotein subunit Back     alignment and domain information
>gnl|CDD|236375 PRK09078, sdhA, succinate dehydrogenase flavoprotein subunit; Reviewed Back     alignment and domain information
>gnl|CDD|216176 pfam00890, FAD_binding_2, FAD binding domain Back     alignment and domain information
>gnl|CDD|236101 PRK07803, sdhA, succinate dehydrogenase flavoprotein subunit; Reviewed Back     alignment and domain information
>gnl|CDD|236259 PRK08401, PRK08401, L-aspartate oxidase; Provisional Back     alignment and domain information
>gnl|CDD|181507 PRK08626, PRK08626, fumarate reductase flavoprotein subunit; Provisional Back     alignment and domain information
>gnl|CDD|130870 TIGR01811, sdhA_Bsu, succinate dehydrogenase or fumarate reductase, flavoprotein subunit, Bacillus subtilis subgroup Back     alignment and domain information
>gnl|CDD|236319 PRK08641, sdhA, succinate dehydrogenase flavoprotein subunit; Reviewed Back     alignment and domain information
>gnl|CDD|233583 TIGR01813, flavo_cyto_c, flavocytochrome c Back     alignment and domain information
>gnl|CDD|236054 PRK07573, sdhA, succinate dehydrogenase flavoprotein subunit; Reviewed Back     alignment and domain information
>gnl|CDD|180584 PRK06481, PRK06481, fumarate reductase flavoprotein subunit; Validated Back     alignment and domain information
>gnl|CDD|217281 pfam02910, Succ_DH_flav_C, Fumarate reductase flavoprotein C-term Back     alignment and domain information
>gnl|CDD|140327 PTZ00306, PTZ00306, NADH-dependent fumarate reductase; Provisional Back     alignment and domain information
>gnl|CDD|237512 PRK13800, PRK13800, putative oxidoreductase/HEAT repeat-containing protein; Provisional Back     alignment and domain information
>gnl|CDD|181346 PRK08275, PRK08275, putative oxidoreductase; Provisional Back     alignment and domain information
>gnl|CDD|140327 PTZ00306, PTZ00306, NADH-dependent fumarate reductase; Provisional Back     alignment and domain information
>gnl|CDD|181346 PRK08275, PRK08275, putative oxidoreductase; Provisional Back     alignment and domain information
>gnl|CDD|235879 PRK06854, PRK06854, adenylylsulfate reductase subunit alpha; Validated Back     alignment and domain information
>gnl|CDD|236214 PRK08274, PRK08274, tricarballylate dehydrogenase; Validated Back     alignment and domain information
>gnl|CDD|216400 pfam01266, DAO, FAD dependent oxidoreductase Back     alignment and domain information
>gnl|CDD|235879 PRK06854, PRK06854, adenylylsulfate reductase subunit alpha; Validated Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 641
COG0029518 NadB Aspartate oxidase [Coenzyme metabolism] 100.0
PLN02815594 L-aspartate oxidase 100.0
PRK07395553 L-aspartate oxidase; Provisional 100.0
TIGR01176580 fum_red_Fp fumarate reductase, flavoprotein subuni 100.0
PLN00128635 Succinate dehydrogenase [ubiquinone] flavoprotein 100.0
PRK06452566 sdhA succinate dehydrogenase flavoprotein subunit; 100.0
PRK08626657 fumarate reductase flavoprotein subunit; Provision 100.0
PRK08958588 sdhA succinate dehydrogenase flavoprotein subunit; 100.0
PTZ00139617 Succinate dehydrogenase [ubiquinone] flavoprotein 100.0
PRK09231582 fumarate reductase flavoprotein subunit; Validated 100.0
PRK07573640 sdhA succinate dehydrogenase flavoprotein subunit; 100.0
PRK08641589 sdhA succinate dehydrogenase flavoprotein subunit; 100.0
PRK07057591 sdhA succinate dehydrogenase flavoprotein subunit; 100.0
PRK09078598 sdhA succinate dehydrogenase flavoprotein subunit; 100.0
PRK09077536 L-aspartate oxidase; Provisional 100.0
PRK08205583 sdhA succinate dehydrogenase flavoprotein subunit; 100.0
PRK07803626 sdhA succinate dehydrogenase flavoprotein subunit; 100.0
PRK06069577 sdhA succinate dehydrogenase flavoprotein subunit; 100.0
TIGR01811603 sdhA_Bsu succinate dehydrogenase or fumarate reduc 100.0
PRK05945575 sdhA succinate dehydrogenase flavoprotein subunit; 100.0
PRK07804541 L-aspartate oxidase; Provisional 100.0
PRK07512513 L-aspartate oxidase; Provisional 100.0
PRK06263543 sdhA succinate dehydrogenase flavoprotein subunit; 100.0
TIGR01812566 sdhA_frdA_Gneg succinate dehydrogenase or fumarate 100.0
PRK05675570 sdhA succinate dehydrogenase flavoprotein subunit; 100.0
PRK08071510 L-aspartate oxidase; Provisional 100.0
TIGR00551488 nadB L-aspartate oxidase. L-aspartate oxidase is t 100.0
TIGR01816565 sdhA_forward succinate dehydrogenase, flavoprotein 100.0
COG1053562 SdhA Succinate dehydrogenase/fumarate reductase, f 100.0
PRK08401466 L-aspartate oxidase; Provisional 100.0
TIGR02061614 aprA adenosine phosphosulphate reductase, alpha su 100.0
PRK08275554 putative oxidoreductase; Provisional 100.0
PRK06854608 adenylylsulfate reductase subunit alpha; Validated 100.0
PRK13800 897 putative oxidoreductase/HEAT repeat-containing pro 100.0
KOG2403642 consensus Succinate dehydrogenase, flavoprotein su 100.0
PRK06175433 L-aspartate oxidase; Provisional 100.0
KOG2404477 consensus Fumarate reductase, flavoprotein subunit 100.0
PRK06481506 fumarate reductase flavoprotein subunit; Validated 100.0
PTZ00306 1167 NADH-dependent fumarate reductase; Provisional 100.0
PF00890417 FAD_binding_2: FAD binding domain of the Pfam fami 100.0
TIGR01813439 flavo_cyto_c flavocytochrome c. This model describ 100.0
PRK07121492 hypothetical protein; Validated 100.0
PRK12837513 3-ketosteroid-delta-1-dehydrogenase; Provisional 100.0
PRK12845564 3-ketosteroid-delta-1-dehydrogenase; Reviewed 100.0
PRK08274466 tricarballylate dehydrogenase; Validated 100.0
PRK12844557 3-ketosteroid-delta-1-dehydrogenase; Reviewed 100.0
PRK12835584 3-ketosteroid-delta-1-dehydrogenase; Reviewed 100.0
PRK12834549 putative FAD-binding dehydrogenase; Reviewed 100.0
PRK12839572 hypothetical protein; Provisional 100.0
TIGR02485432 CobZ_N-term precorrin 3B synthase CobZ. CobZ is es 100.0
PRK07843557 3-ketosteroid-delta-1-dehydrogenase; Reviewed 100.0
PRK12843578 putative FAD-binding dehydrogenase; Reviewed 100.0
PRK12842574 putative succinate dehydrogenase; Reviewed 100.0
PRK06134581 putative FAD-binding dehydrogenase; Reviewed 100.0
COG2081408 Predicted flavoproteins [General function predicti 99.95
PF03486409 HI0933_like: HI0933-like protein; InterPro: IPR004 99.93
COG3573552 Predicted oxidoreductase [General function predict 99.92
PF02910129 Succ_DH_flav_C: Fumarate reductase flavoprotein C- 99.91
TIGR00275400 flavoprotein, HI0933 family. The model when search 99.9
COG1249454 Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, 99.79
TIGR01372 985 soxA sarcosine oxidase, alpha subunit family, hete 99.75
TIGR03862376 flavo_PP4765 uncharacterized flavoprotein, PP_4765 99.72
TIGR01421450 gluta_reduc_1 glutathione-disulfide reductase, ani 99.67
PTZ00058561 glutathione reductase; Provisional 99.67
TIGR01424446 gluta_reduc_2 glutathione-disulfide reductase, pla 99.67
PLN02546558 glutathione reductase 99.67
PLN02507499 glutathione reductase 99.66
TIGR01423486 trypano_reduc trypanothione-disulfide reductase. T 99.64
PRK06467471 dihydrolipoamide dehydrogenase; Reviewed 99.63
TIGR01438484 TGR thioredoxin and glutathione reductase selenopr 99.63
PRK06115466 dihydrolipoamide dehydrogenase; Reviewed 99.62
PLN02661357 Putative thiazole synthesis 99.62
PRK06116450 glutathione reductase; Validated 99.61
PRK06370463 mercuric reductase; Validated 99.59
KOG0405478 consensus Pyridine nucleotide-disulphide oxidoredu 99.58
COG0492305 TrxB Thioredoxin reductase [Posttranslational modi 99.58
PRK06327475 dihydrolipoamide dehydrogenase; Validated 99.57
PRK14694468 putative mercuric reductase; Provisional 99.57
PRK06416462 dihydrolipoamide dehydrogenase; Reviewed 99.57
PRK05976472 dihydrolipoamide dehydrogenase; Validated 99.57
PRK05249461 soluble pyridine nucleotide transhydrogenase; Prov 99.57
PRK07818466 dihydrolipoamide dehydrogenase; Reviewed 99.56
PRK04176257 ribulose-1,5-biphosphate synthetase; Provisional 99.56
PRK08010441 pyridine nucleotide-disulfide oxidoreductase; Prov 99.54
PRK07845466 flavoprotein disulfide reductase; Reviewed 99.54
TIGR03140515 AhpF alkyl hydroperoxide reductase, F subunit. Thi 99.52
PTZ00153659 lipoamide dehydrogenase; Provisional 99.52
PRK13748561 putative mercuric reductase; Provisional 99.51
PRK06292460 dihydrolipoamide dehydrogenase; Validated 99.5
TIGR01350461 lipoamide_DH dihydrolipoamide dehydrogenase. The m 99.5
PRK14727479 putative mercuric reductase; Provisional 99.5
TIGR02053463 MerA mercuric reductase. This model represents the 99.49
COG1635262 THI4 Ribulose 1,5-bisphosphate synthetase, convert 99.49
PF01946230 Thi4: Thi4 family; PDB: 1RP0_A 3FPZ_B 3JSK_K. 99.49
PRK06912458 acoL dihydrolipoamide dehydrogenase; Validated 99.48
TIGR00292254 thiazole biosynthesis enzyme. This enzyme is invol 99.48
TIGR00136617 gidA glucose-inhibited division protein A. GidA, t 99.47
PTZ00052499 thioredoxin reductase; Provisional 99.47
PRK07251438 pyridine nucleotide-disulfide oxidoreductase; Prov 99.47
PRK07846451 mycothione reductase; Reviewed 99.46
KOG4716503 consensus Thioredoxin reductase [Posttranslational 99.46
KOG1335506 consensus Dihydrolipoamide dehydrogenase [Energy p 99.46
TIGR03143555 AhpF_homolog putative alkyl hydroperoxide reductas 99.45
PRK05192618 tRNA uridine 5-carboxymethylaminomethyl modificati 99.45
PRK15317517 alkyl hydroperoxide reductase subunit F; Provision 99.45
COG0644396 FixC Dehydrogenases (flavoproteins) [Energy produc 99.44
TIGR03452452 mycothione_red mycothione reductase. Mycothiol, a 99.42
PRK05329422 anaerobic glycerol-3-phosphate dehydrogenase subun 99.41
PRK11101546 glpA sn-glycerol-3-phosphate dehydrogenase subunit 99.39
TIGR01292300 TRX_reduct thioredoxin-disulfide reductase. This m 99.38
KOG0042680 consensus Glycerol-3-phosphate dehydrogenase [Ener 99.37
COG3634520 AhpF Alkyl hydroperoxide reductase, large subunit 99.35
COG0578532 GlpA Glycerol-3-phosphate dehydrogenase [Energy pr 99.35
PRK13512438 coenzyme A disulfide reductase; Provisional 99.35
PRK10015429 oxidoreductase; Provisional 99.33
TIGR03329460 Phn_aa_oxid putative aminophosphonate oxidoreducta 99.31
PRK10262321 thioredoxin reductase; Provisional 99.31
PLN02464627 glycerol-3-phosphate dehydrogenase 99.27
PRK12266508 glpD glycerol-3-phosphate dehydrogenase; Reviewed 99.26
PF01266358 DAO: FAD dependent oxidoreductase; InterPro: IPR00 99.25
PRK12831464 putative oxidoreductase; Provisional 99.23
PRK09564444 coenzyme A disulfide reductase; Reviewed 99.2
PRK13369502 glycerol-3-phosphate dehydrogenase; Provisional 99.16
PLN02697529 lycopene epsilon cyclase 99.16
COG2509486 Uncharacterized FAD-dependent dehydrogenases [Gene 99.16
PRK09754396 phenylpropionate dioxygenase ferredoxin reductase 99.15
TIGR01316449 gltA glutamate synthase (NADPH), homotetrameric. T 99.15
PF01134392 GIDA: Glucose inhibited division protein A; InterP 99.14
PF00732296 GMC_oxred_N: GMC oxidoreductase; InterPro: IPR0001 99.13
PRK098531019 putative selenate reductase subunit YgfK; Provisio 99.12
PRK11749457 dihydropyrimidine dehydrogenase subunit A; Provisi 99.12
TIGR02023388 BchP-ChlP geranylgeranyl reductase. This model rep 99.11
PRK12409410 D-amino acid dehydrogenase small subunit; Provisio 99.11
TIGR01373407 soxB sarcosine oxidase, beta subunit family, heter 99.11
PF12831428 FAD_oxidored: FAD dependent oxidoreductase; PDB: 3 99.11
PRK10157428 putative oxidoreductase FixC; Provisional 99.11
TIGR02028398 ChlP geranylgeranyl reductase. This model represen 99.1
COG0579429 Predicted dehydrogenase [General function predicti 99.1
TIGR01320483 mal_quin_oxido malate:quinone-oxidoreductase. This 99.09
PRK06126545 hypothetical protein; Provisional 99.09
PRK00711416 D-amino acid dehydrogenase small subunit; Validate 99.09
PRK12810471 gltD glutamate synthase subunit beta; Reviewed 99.08
PF07992201 Pyr_redox_2: Pyridine nucleotide-disulphide oxidor 99.07
PRK12769654 putative oxidoreductase Fe-S binding subunit; Revi 99.07
PRK04965377 NADH:flavorubredoxin oxidoreductase; Provisional 99.06
PRK12779 944 putative bifunctional glutamate synthase subunit b 99.05
PRK07364415 2-octaprenyl-6-methoxyphenyl hydroxylase; Validate 99.05
PRK14989 847 nitrite reductase subunit NirD; Provisional 99.05
PRK11728393 hydroxyglutarate oxidase; Provisional 99.04
PRK05257494 malate:quinone oxidoreductase; Validated 99.04
PLN02463447 lycopene beta cyclase 99.04
TIGR033151012 Se_ygfK putative selenate reductase, YgfK subunit. 99.04
PLN00093450 geranylgeranyl diphosphate reductase; Provisional 99.03
PRK127751006 putative trifunctional 2-polyprenylphenol hydroxyl 99.03
TIGR03364365 HpnW_proposed FAD dependent oxidoreductase TIGR033 99.03
TIGR01377380 soxA_mon sarcosine oxidase, monomeric form. Sarcos 99.03
KOG1298509 consensus Squalene monooxygenase [Lipid transport 99.03
PRK12778752 putative bifunctional 2-polyprenylphenol hydroxyla 99.02
PRK01747662 mnmC bifunctional tRNA (mnm(5)s(2)U34)-methyltrans 98.99
PRK12770352 putative glutamate synthase subunit beta; Provisio 98.99
PRK12814652 putative NADPH-dependent glutamate synthase small 98.99
PRK13977576 myosin-cross-reactive antigen; Provisional 98.98
TIGR02032295 GG-red-SF geranylgeranyl reductase family. This mo 98.98
KOG0404322 consensus Thioredoxin reductase [Posttranslational 98.98
PRK11259376 solA N-methyltryptophan oxidase; Provisional 98.97
PRK13339497 malate:quinone oxidoreductase; Reviewed 98.96
PRK06185407 hypothetical protein; Provisional 98.96
KOG2415621 consensus Electron transfer flavoprotein ubiquinon 98.95
PF01494356 FAD_binding_3: FAD binding domain; InterPro: IPR00 98.95
PLN02985514 squalene monooxygenase 98.94
PRK13984604 putative oxidoreductase; Provisional 98.93
COG0665387 DadA Glycine/D-amino acid oxidases (deaminating) [ 98.93
PRK09126392 hypothetical protein; Provisional 98.9
TIGR02374 785 nitri_red_nirB nitrite reductase [NAD(P)H], large 98.9
PRK06834488 hypothetical protein; Provisional 98.89
TIGR01317485 GOGAT_sm_gam glutamate synthases, NADH/NADPH, smal 98.89
TIGR03378419 glycerol3P_GlpB glycerol-3-phosphate dehydrogenase 98.89
PRK06183538 mhpA 3-(3-hydroxyphenyl)propionate hydroxylase; Va 98.89
PRK06184502 hypothetical protein; Provisional 98.88
COG0445621 GidA Flavin-dependent tRNA uridine 5-carboxymethyl 98.87
COG0654387 UbiH 2-polyprenyl-6-methoxyphenol hydroxylase and 98.86
PRK07045388 putative monooxygenase; Reviewed 98.85
TIGR01318467 gltD_gamma_fam glutamate synthase small subunit fa 98.85
PTZ00318424 NADH dehydrogenase-like protein; Provisional 98.85
PRK12809639 putative oxidoreductase Fe-S binding subunit; Revi 98.84
PRK08244493 hypothetical protein; Provisional 98.84
PTZ00383497 malate:quinone oxidoreductase; Provisional 98.84
PRK07190487 hypothetical protein; Provisional 98.83
PRK05335436 tRNA (uracil-5-)-methyltransferase Gid; Reviewed 98.82
PRK08773392 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hy 98.82
PRK07608388 ubiquinone biosynthesis hydroxylase family protein 98.81
PRK11445351 putative oxidoreductase; Provisional 98.8
PRK02106560 choline dehydrogenase; Validated 98.8
PRK06617374 2-octaprenyl-6-methoxyphenyl hydroxylase; Validate 98.8
PRK08849384 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hy 98.79
PRK08132547 FAD-dependent oxidoreductase; Provisional 98.78
PRK08013400 oxidoreductase; Provisional 98.78
PRK08243392 4-hydroxybenzoate 3-monooxygenase; Validated 98.78
PRK07333403 2-octaprenyl-6-methoxyphenyl hydroxylase; Provisio 98.78
TIGR03169364 Nterm_to_SelD pyridine nucleotide-disulfide oxidor 98.77
PRK08020391 ubiF 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquin 98.77
TIGR01988385 Ubi-OHases Ubiquinone biosynthesis hydroxylase, Ub 98.76
PRK07494388 2-octaprenyl-6-methoxyphenyl hydroxylase; Provisio 98.73
PRK06847375 hypothetical protein; Provisional 98.72
PRK05732395 2-octaprenyl-6-methoxyphenyl hydroxylase; Validate 98.72
TIGR01810532 betA choline dehydrogenase. This enzyme is a membe 98.71
TIGR02730493 carot_isom carotene isomerase. Members of this fam 98.71
PRK07538413 hypothetical protein; Provisional 98.71
PRK08163396 salicylate hydroxylase; Provisional 98.7
PRK05714405 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hy 98.7
TIGR02462544 pyranose_ox pyranose oxidase. Pyranose oxidase (al 98.69
TIGR02360390 pbenz_hydroxyl 4-hydroxybenzoate 3-monooxygenase. 98.69
PF13738203 Pyr_redox_3: Pyridine nucleotide-disulphide oxidor 98.67
TIGR01984382 UbiH 2-polyprenyl-6-methoxyphenol 4-hydroxylase. T 98.67
PRK08850405 2-octaprenyl-6-methoxyphenol hydroxylase; Validate 98.67
PRK12771564 putative glutamate synthase (NADPH) small subunit; 98.66
PLN02785587 Protein HOTHEAD 98.65
PRK09897534 hypothetical protein; Provisional 98.6
PTZ00367567 squalene epoxidase; Provisional 98.6
KOG2853509 consensus Possible oxidoreductase [General functio 98.6
KOG2311 679 consensus NAD/FAD-utilizing protein possibly invol 98.59
TIGR01790388 carotene-cycl lycopene cyclase family protein. Thi 98.59
PRK06996398 hypothetical protein; Provisional 98.58
COG1233487 Phytoene dehydrogenase and related proteins [Secon 98.58
PRK06475400 salicylate hydroxylase; Provisional 98.58
PLN02172461 flavin-containing monooxygenase FMO GS-OX 98.57
KOG2960328 consensus Protein involved in thiamine biosynthesi 98.57
PRK07236386 hypothetical protein; Provisional 98.56
KOG1336478 consensus Monodehydroascorbate/ferredoxin reductas 98.53
TIGR01989437 COQ6 Ubiquinone biosynthesis mono0xygenase COQ6. T 98.52
COG3075421 GlpB Anaerobic glycerol-3-phosphate dehydrogenase 98.51
PRK07588391 hypothetical protein; Provisional 98.5
KOG2844 856 consensus Dimethylglycine dehydrogenase precursor 98.49
TIGR02733492 desat_CrtD C-3',4' desaturase CrtD. Members of thi 98.47
PRK08294634 phenol 2-monooxygenase; Provisional 98.46
KOG2820399 consensus FAD-dependent oxidoreductase [General fu 98.43
PRK07208479 hypothetical protein; Provisional 98.42
PRK06753373 hypothetical protein; Provisional 98.42
COG1252405 Ndh NADH dehydrogenase, FAD-containing subunit [En 98.42
PRK05868372 hypothetical protein; Validated 98.41
TIGR02731453 phytoene_desat phytoene desaturase. Plants and cya 98.4
PF06039488 Mqo: Malate:quinone oxidoreductase (Mqo); InterPro 98.38
TIGR02734502 crtI_fam phytoene desaturase. Phytoene is converte 98.37
COG3380331 Predicted NAD/FAD-dependent oxidoreductase [Genera 98.35
COG2303542 BetA Choline dehydrogenase and related flavoprotei 98.32
PLN02927668 antheraxanthin epoxidase/zeaxanthin epoxidase 98.28
PLN02612567 phytoene desaturase 98.26
TIGR03219414 salicylate_mono salicylate 1-monooxygenase. Member 98.23
KOG1238623 consensus Glucose dehydrogenase/choline dehydrogen 98.22
TIGR03377516 glycerol3P_GlpA glycerol-3-phosphate dehydrogenase 98.21
PTZ00363443 rab-GDP dissociation inhibitor; Provisional 98.2
PF05834374 Lycopene_cycl: Lycopene cyclase protein; InterPro: 98.19
PF04820454 Trp_halogenase: Tryptophan halogenase; InterPro: I 98.17
COG2072443 TrkA Predicted flavoprotein involved in K+ transpo 98.16
PF1345068 NAD_binding_8: NAD(P)-binding Rossmann-like domain 98.15
KOG2614420 consensus Kynurenine 3-monooxygenase and related f 98.11
TIGR02732474 zeta_caro_desat carotene 7,8-desaturase. Carotene 98.11
KOG2852380 consensus Possible oxidoreductase [General functio 98.1
PF13454156 NAD_binding_9: FAD-NAD(P)-binding 98.1
TIGR01789370 lycopene_cycl lycopene cyclase. This model represe 98.06
COG1148622 HdrA Heterodisulfide reductase, subunit A and rela 97.97
KOG1399448 consensus Flavin-containing monooxygenase [Seconda 97.92
PRK08255 765 salicylyl-CoA 5-hydroxylase; Reviewed 97.88
COG1251 793 NirB NAD(P)H-nitrite reductase [Energy production 97.86
PF00743531 FMO-like: Flavin-binding monooxygenase-like; Inter 97.85
PRK065671028 putative bifunctional glutamate synthase subunit b 97.85
PLN02487569 zeta-carotene desaturase 97.84
PF0007080 Pyr_redox: Pyridine nucleotide-disulphide oxidored 97.82
COG1232444 HemY Protoporphyrinogen oxidase [Coenzyme metaboli 97.77
KOG4254561 consensus Phytoene desaturase [Coenzyme transport 97.74
TIGR00031377 UDP-GALP_mutase UDP-galactopyranose mutase. The ge 97.71
TIGR03197381 MnmC_Cterm tRNA U-34 5-methylaminomethyl-2-thiouri 97.67
PRK05976472 dihydrolipoamide dehydrogenase; Validated 97.62
TIGR02352337 thiamin_ThiO glycine oxidase ThiO. This family con 97.62
KOG0029501 consensus Amine oxidase [Secondary metabolites bio 97.61
PRK07233434 hypothetical protein; Provisional 97.57
PLN02576496 protoporphyrinogen oxidase 97.55
PF13434341 K_oxygenase: L-lysine 6-monooxygenase (NADPH-requi 97.52
PF13434341 K_oxygenase: L-lysine 6-monooxygenase (NADPH-requi 97.51
COG0562374 Glf UDP-galactopyranose mutase [Cell envelope biog 97.51
PLN02268435 probable polyamine oxidase 97.48
PF06100500 Strep_67kDa_ant: Streptococcal 67 kDa myosin-cross 97.46
TIGR00562462 proto_IX_ox protoporphyrinogen oxidase. This prote 97.43
TIGR01350461 lipoamide_DH dihydrolipoamide dehydrogenase. The m 97.43
TIGR03140515 AhpF alkyl hydroperoxide reductase, F subunit. Thi 97.43
PRK15317517 alkyl hydroperoxide reductase subunit F; Provision 97.42
PRK06416462 dihydrolipoamide dehydrogenase; Reviewed 97.42
TIGR03385427 CoA_CoA_reduc CoA-disulfide reductase. Members of 97.41
PRK06912458 acoL dihydrolipoamide dehydrogenase; Validated 97.41
PRK06115466 dihydrolipoamide dehydrogenase; Reviewed 97.39
TIGR01316449 gltA glutamate synthase (NADPH), homotetrameric. T 97.37
COG4529474 Uncharacterized protein conserved in bacteria [Fun 97.34
TIGR02053463 MerA mercuric reductase. This model represents the 97.34
PRK07818466 dihydrolipoamide dehydrogenase; Reviewed 97.33
PRK11883451 protoporphyrinogen oxidase; Reviewed 97.33
PRK06370463 mercuric reductase; Validated 97.32
TIGR01292300 TRX_reduct thioredoxin-disulfide reductase. This m 97.31
PRK12831464 putative oxidoreductase; Provisional 97.31
COG3349485 Uncharacterized conserved protein [Function unknow 97.28
KOG2665453 consensus Predicted FAD-dependent oxidoreductase [ 97.27
COG1231450 Monoamine oxidase [Amino acid transport and metabo 97.26
PRK04965377 NADH:flavorubredoxin oxidoreductase; Provisional 97.22
PRK06116450 glutathione reductase; Validated 97.19
PRK06327475 dihydrolipoamide dehydrogenase; Validated 97.16
PRK07251438 pyridine nucleotide-disulfide oxidoreductase; Prov 97.16
PLN02852491 ferredoxin-NADP+ reductase 97.15
PRK12416463 protoporphyrinogen oxidase; Provisional 97.14
PRK10262321 thioredoxin reductase; Provisional 97.14
PLN02676487 polyamine oxidase 97.11
PRK09754396 phenylpropionate dioxygenase ferredoxin reductase 97.1
TIGR00137433 gid_trmFO tRNA:m(5)U-54 methyltransferase. This mo 97.06
PRK05249461 soluble pyridine nucleotide transhydrogenase; Prov 97.05
KOG1346659 consensus Programmed cell death 8 (apoptosis-induc 97.03
TIGR01421450 gluta_reduc_1 glutathione-disulfide reductase, ani 97.02
PLN02328808 lysine-specific histone demethylase 1 homolog 96.97
COG1249454 Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, 96.95
PLN02529738 lysine-specific histone demethylase 1 96.95
PLN02568539 polyamine oxidase 96.92
PTZ00058561 glutathione reductase; Provisional 96.9
PRK09564444 coenzyme A disulfide reductase; Reviewed 96.89
TIGR01424446 gluta_reduc_2 glutathione-disulfide reductase, pla 96.88
PRK14989 847 nitrite reductase subunit NirD; Provisional 96.82
COG0446415 HcaD Uncharacterized NAD(FAD)-dependent dehydrogen 96.82
PLN02507499 glutathione reductase 96.8
PRK14694468 putative mercuric reductase; Provisional 96.79
TIGR01438484 TGR thioredoxin and glutathione reductase selenopr 96.79
COG0446415 HcaD Uncharacterized NAD(FAD)-dependent dehydrogen 96.79
PTZ00153659 lipoamide dehydrogenase; Provisional 96.78
TIGR02374785 nitri_red_nirB nitrite reductase [NAD(P)H], large 96.76
TIGR03385427 CoA_CoA_reduc CoA-disulfide reductase. Members of 96.74
PRK14727479 putative mercuric reductase; Provisional 96.74
PRK06467471 dihydrolipoamide dehydrogenase; Reviewed 96.74
PRK06292460 dihydrolipoamide dehydrogenase; Validated 96.72
TIGR01423486 trypano_reduc trypanothione-disulfide reductase. T 96.71
PRK12778752 putative bifunctional 2-polyprenylphenol hydroxyla 96.71
PRK07845466 flavoprotein disulfide reductase; Reviewed 96.68
PRK12810471 gltD glutamate synthase subunit beta; Reviewed 96.68
TIGR01318467 gltD_gamma_fam glutamate synthase small subunit fa 96.68
PRK11749457 dihydropyrimidine dehydrogenase subunit A; Provisi 96.67
PRK08010441 pyridine nucleotide-disulfide oxidoreductase; Prov 96.63
PRK07846451 mycothione reductase; Reviewed 96.59
KOG1276491 consensus Protoporphyrinogen oxidase [Coenzyme tra 96.57
TIGR03143555 AhpF_homolog putative alkyl hydroperoxide reductas 96.56
KOG0685498 consensus Flavin-containing amine oxidase [Coenzym 96.55
PRK13748561 putative mercuric reductase; Provisional 96.55
COG2907447 Predicted NAD/FAD-binding protein [General functio 96.47
COG3634520 AhpF Alkyl hydroperoxide reductase, large subunit 96.43
PRK12770352 putative glutamate synthase subunit beta; Provisio 96.42
PRK12779944 putative bifunctional glutamate synthase subunit b 96.42
PLN02546558 glutathione reductase 96.38
PTZ00052499 thioredoxin reductase; Provisional 96.37
PRK13512438 coenzyme A disulfide reductase; Provisional 96.37
PTZ00188506 adrenodoxin reductase; Provisional 96.34
TIGR03452452 mycothione_red mycothione reductase. Mycothiol, a 96.33
PRK127751006 putative trifunctional 2-polyprenylphenol hydroxyl 96.29
PLN02976 1713 amine oxidase 96.27
COG0493457 GltD NADPH-dependent glutamate synthase beta chain 96.26
PLN03000 881 amine oxidase 96.25
KOG1335506 consensus Dihydrolipoamide dehydrogenase [Energy p 96.08
COG1252405 Ndh NADH dehydrogenase, FAD-containing subunit [En 96.07
PTZ00318424 NADH dehydrogenase-like protein; Provisional 95.93
KOG2495491 consensus NADH-dehydrogenase (ubiquinone) [Energy 95.9
KOG3855481 consensus Monooxygenase involved in coenzyme Q (ub 95.83
COG0492305 TrxB Thioredoxin reductase [Posttranslational modi 95.65
KOG1336478 consensus Monodehydroascorbate/ferredoxin reductas 95.6
PRK12814652 putative NADPH-dependent glutamate synthase small 95.29
TIGR01372 985 soxA sarcosine oxidase, alpha subunit family, hete 95.25
COG3486436 IucD Lysine/ornithine N-monooxygenase [Secondary m 95.01
PRK12771564 putative glutamate synthase (NADPH) small subunit; 94.86
KOG03992142 consensus Glutamate synthase [Amino acid transport 94.86
PF00996438 GDI: GDP dissociation inhibitor; InterPro: IPR0182 94.79
PRK13984604 putative oxidoreductase; Provisional 94.41
TIGR03169364 Nterm_to_SelD pyridine nucleotide-disulfide oxidor 94.04
KOG1800468 consensus Ferredoxin/adrenodoxin reductase [Nucleo 93.96
TIGR033151012 Se_ygfK putative selenate reductase, YgfK subunit. 93.92
TIGR01317485 GOGAT_sm_gam glutamate synthases, NADH/NADPH, smal 93.86
COG3486436 IucD Lysine/ornithine N-monooxygenase [Secondary m 93.79
PLN02852491 ferredoxin-NADP+ reductase 93.62
KOG0404322 consensus Thioredoxin reductase [Posttranslational 93.41
PRK098531019 putative selenate reductase subunit YgfK; Provisio 93.27
COG1206439 Gid NAD(FAD)-utilizing enzyme possibly involved in 92.61
KOG2755334 consensus Oxidoreductase [General function predict 92.07
KOG3851446 consensus Sulfide:quinone oxidoreductase/flavo-bin 91.55
PRK02705459 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn 89.57
PRK01438480 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn 89.4
COG1251 793 NirB NAD(P)H-nitrite reductase [Energy production 89.31
PF13738203 Pyr_redox_3: Pyridine nucleotide-disulphide oxidor 89.09
KOG4405547 consensus GDP dissociation inhibitor [Signal trans 89.08
KOG2755334 consensus Oxidoreductase [General function predict 89.06
PF01210157 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate 88.75
PF13241103 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_ 88.69
PF01134392 GIDA: Glucose inhibited division protein A; InterP 88.55
COG5044434 MRS6 RAB proteins geranylgeranyltransferase compon 88.2
PF01593450 Amino_oxidase: Flavin containing amine oxidoreduct 88.15
PF01488135 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; 88.06
KOG2495491 consensus NADH-dehydrogenase (ubiquinone) [Energy 87.72
TIGR01470205 cysG_Nterm siroheme synthase, N-terminal domain. T 87.47
PF02558151 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: 87.44
PRK15116268 sulfur acceptor protein CsdL; Provisional 87.44
PF02737180 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind 86.28
PF01262168 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal 86.2
TIGR02355240 moeB molybdopterin synthase sulfurylase MoeB. This 85.9
COG0569225 TrkA K+ transport systems, NAD-binding component [ 85.78
KOG1439440 consensus RAB proteins geranylgeranyltransferase c 85.51
KOG4716503 consensus Thioredoxin reductase [Posttranslational 85.43
TIGR00292254 thiazole biosynthesis enzyme. This enzyme is invol 85.34
TIGR00518370 alaDH alanine dehydrogenase. The family of known L 85.33
PRK09424509 pntA NAD(P) transhydrogenase subunit alpha; Provis 85.07
COG3075421 GlpB Anaerobic glycerol-3-phosphate dehydrogenase 84.84
COG0686371 Ald Alanine dehydrogenase [Amino acid transport an 84.84
PRK14106450 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn 84.5
TIGR02354200 thiF_fam2 thiamine biosynthesis protein ThiF, fami 84.48
PRK12475338 thiamine/molybdopterin biosynthesis MoeB-like prot 84.25
PRK06718202 precorrin-2 dehydrogenase; Reviewed 83.39
cd01487174 E1_ThiF_like E1_ThiF_like. Member of superfamily o 83.28
PF00899135 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a 83.28
COG1635262 THI4 Ribulose 1,5-bisphosphate synthetase, convert 83.22
PRK04176257 ribulose-1,5-biphosphate synthetase; Provisional 83.1
PRK06719157 precorrin-2 dehydrogenase; Validated 83.07
PRK12549284 shikimate 5-dehydrogenase; Reviewed 83.01
PRK08328231 hypothetical protein; Provisional 82.96
PRK07688339 thiamine/molybdopterin biosynthesis ThiF/MoeB-like 82.83
PRK08223287 hypothetical protein; Validated 82.47
TIGR02356202 adenyl_thiF thiazole biosynthesis adenylyltransfer 82.25
KOG3923342 consensus D-aspartate oxidase [Amino acid transpor 82.04
PRK08644212 thiamine biosynthesis protein ThiF; Provisional 81.88
cd01483143 E1_enzyme_family Superfamily of activating enzymes 81.75
PRK05690245 molybdopterin biosynthesis protein MoeB; Provision 81.09
TIGR03378419 glycerol3P_GlpB glycerol-3-phosphate dehydrogenase 81.01
PRK12550272 shikimate 5-dehydrogenase; Reviewed 80.86
PRK12548289 shikimate 5-dehydrogenase; Provisional 80.59
PRK14027283 quinate/shikimate dehydrogenase; Provisional 80.57
COG1063350 Tdh Threonine dehydrogenase and related Zn-depende 80.49
cd00401413 AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado 80.29
PF03721185 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogen 80.22
PF02254116 TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg 80.05
PRK06129308 3-hydroxyacyl-CoA dehydrogenase; Validated 80.02
>COG0029 NadB Aspartate oxidase [Coenzyme metabolism] Back     alignment and domain information
Probab=100.00  E-value=4.3e-109  Score=845.36  Aligned_cols=505  Identities=48%  Similarity=0.721  Sum_probs=451.2

Q ss_pred             cEEEECccHHHHHHHHHHHhcCCeEEEEecCCCCCccccccCceeeccCCCCCHHHHHHHHHHhccCCCCHHHHHHHHHH
Q 006532           84 DFSVIGSGVAGLCYALEVAKHGTVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQDTIVAGAYLCDDETVRVVCTE  163 (641)
Q Consensus        84 DVlVIGgG~AGl~AA~~aa~~G~V~llek~~~~~g~s~~a~ggi~~~~~~~d~~~~~~~d~~~~g~~~~~~~~~~~~~~~  163 (641)
                      ||+|||+|+|||++|+.|++.-+|+||.|+....++|.|+||||.+...++|+++.|+.|++.+|.++||++.++.++.+
T Consensus         9 dV~IiGsG~AGL~~AL~L~~~~~V~vltk~~~~~~sS~~AQGGIAa~~~~~Ds~~~Hv~DTL~AG~glcD~~aV~~iv~~   88 (518)
T COG0029           9 DVLIIGSGLAGLTAALSLAPSFRVTVLTKGPLGESSSYWAQGGIAAALSEDDSPELHVADTLAAGAGLCDEEAVEFIVSE   88 (518)
T ss_pred             cEEEECCcHHHHHHHHhCCCCCcEEEEeCCCCCCccchhhcCceEeeeCCCCCHHHHHHHHHHhcCCCCcHHHHHHHHHh
Confidence            99999999999999999998779999999999889999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHcCCccccCCCCCcccccCCCccccceeeccCCcHHHHHHHHHHHHHcCCCcEEEcceEEEEEEecCCCCC
Q 006532          164 GPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPD  243 (641)
Q Consensus       164 ~~~~i~~l~~~Gv~~~~~~~g~~~~~~~gg~~~~r~~~~~~~~g~~~~~~l~~~~~~~~gv~i~~~~~v~~l~~~~~g~~  243 (641)
                      ++.+++||.++|++|+++.+|.+.+..+|+|+.+|++|..+.+|+.++..|.++++++++|++++++.+.+|+++++.  
T Consensus        89 ~~~ai~~Li~~Gv~FDr~~~g~~~lt~EggHS~rRIlH~~~~TG~~I~~~L~~~v~~~p~I~v~e~~~a~~li~~~~~--  166 (518)
T COG0029          89 APEAIEWLIDLGVPFDRDEDGRLHLTREGGHSRRRILHAADATGKEIMTALLKKVRNRPNITVLEGAEALDLIIEDGI--  166 (518)
T ss_pred             HHHHHHHHHHcCCCCcCCCCCceeeeeecccCCceEEEecCCccHHHHHHHHHHHhcCCCcEEEecchhhhhhhcCCc--
Confidence            999999999999999999999999999999999999999999999999999999998899999999999999998542  


Q ss_pred             ceEEEEEEEecCCCeEEEEEcCEEEEcCCCCCcCCCCCCCcccCccchhHHHHhcCCeeeccccccccceeecCCCCCCC
Q 006532          244 AVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFHPTALADEGLPIK  323 (641)
Q Consensus       244 ~~v~Gv~~~~~~~g~~~~i~Ak~VVlAtGg~~~~~~~~~~~~~~~Gdg~~~a~~aGa~l~~~e~~q~~p~~~~~~g~~~~  323 (641)
                       .+.|+.+.+..+ +...|+|+.|||||||.+++|..++||..++|||++||+++|+.+.||||+|||||.+..++.   
T Consensus       167 -~~~Gv~~~~~~~-~~~~~~a~~vVLATGG~g~ly~~TTNp~~~~GdGIamA~rAGa~v~DlEFvQFHPT~l~~~~~---  241 (518)
T COG0029         167 -GVAGVLVLNRNG-ELGTFRAKAVVLATGGLGGLYAYTTNPKGSTGDGIAMAWRAGAAVADLEFVQFHPTALYIPQR---  241 (518)
T ss_pred             -eEeEEEEecCCC-eEEEEecCeEEEecCCCcccccccCCCccccccHHHHHHHcCCeecCccceeeccceecCCCC---
Confidence             455999986433 678999999999999999999999999999999999999999999999999999999876532   


Q ss_pred             CCCCCCccceeeccccCCCcEEEeCCCCccccccccccccCchhHHHHHHHHHHHhcCCCeEEEeCCCCChhHHHhhChh
Q 006532          324 PKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDERAELAPRDVVARSIDDQLKKRNEKYVLLDISHKPTEKILSHFPN  403 (641)
Q Consensus       324 p~~~~~~~~l~~e~~~~~g~~~vn~~G~rf~~~~~~~~~~~~r~~~~~~i~~~~~~~~~~~v~lD~~~~~~~~~~~~~~~  403 (641)
                            ..+|++|++||+|++|+|.+|+|||..|+|.+||+|||+|+++|+.||++++.. ||||+++.+.+.+.++||+
T Consensus       242 ------~~~LiSEAVRGEGA~L~~~~GeRFm~~~~p~~ELAPRDVVARAI~~e~~~~g~~-V~LD~s~~~~~~~~~rFP~  314 (518)
T COG0029         242 ------RAFLISEAVRGEGAILVNEDGERFMPDYHPRGELAPRDVVARAIDAEMKRGGAD-VFLDISHIPGDFFERRFPT  314 (518)
T ss_pred             ------ccceeehhhhcCccEEECCCCCccccCCCCccccchHHHHHHHHHHHHHhcCCe-EEEeccCCCchhhhhhCcH
Confidence                  268999999999999999999999999999999999999999999999997644 9999999998889999999


Q ss_pred             HHHHHHHcCCCCCCCCeeEeeeeccccCceEeCCCCCcccCCeeecccccCCCCCCCCccchhhhHHHHHHHHHHHHHHH
Q 006532          404 IAAECLKYGLDITSQPIPVVPAAHYMCGGVRAGLQGETNVRGLYVAGEVACTGLHGANRLASNSLLEALVFARRAVQPSI  483 (641)
Q Consensus       404 ~~~~~~~~G~d~~~~~i~v~p~~~~~~GGI~vD~~~~T~ipGLyAaGe~a~~g~~Ga~rl~g~sl~~a~v~G~~Ag~~aa  483 (641)
                      +++.|.+.|+||.++||||.|++||+||||.||.++||+||||||+|||+|+|+||||||+||||.||+|||++|++.++
T Consensus       315 I~~~c~~~GiD~~r~~IPV~PaaHY~mGGI~vD~~GrTsi~gLYAiGEvA~TGlHGANRLASNSLLE~vV~g~~aA~~i~  394 (518)
T COG0029         315 IYAACLKAGIDPTREPIPVVPAAHYTMGGIAVDANGRTSIPGLYAIGEVACTGLHGANRLASNSLLECLVFGKRAAEDIA  394 (518)
T ss_pred             HHHHHHHcCCCcccCccCccchhheecccEEECCCCcccCcccEEeeeecccccccchhhhhhhHHHHHHHHHHHHHHhh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999988


Q ss_pred             HhhhcccccccccccccccccCCccccccchhhhhchHHHHHHHHHHHHhcCccccCHHHHHHHHHHHHHHHHHHHHhhh
Q 006532          484 DHKKSTSIDLSASNWWTRTVVPKSLGCNVMHNILRRTKEVRKELQSIMWRYVGIVRSTTSLQTAEWRIDELEAEWETYLF  563 (641)
Q Consensus       484 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~m~~~~g~~R~~~~L~~al~~l~~l~~~~~~~~~  563 (641)
                      ...............+. ..          .+ ......-+++||++||+|+||+|+.++|++++.+|+.++++....  
T Consensus       395 ~~~~~~~~~~~~~~~~~-~~----------~~-~~~~~~~~~~Lr~~m~~~~GI~R~~~~L~~~~~~l~~~~~~~~~~--  460 (518)
T COG0029         395 GRLAPAPREAPTLPVRD-DY----------EE-NVLLAHDRHELRRLMWRYVGIVRTAKGLERAIRRLEPLQQENDEY--  460 (518)
T ss_pred             cccccCccCCCCCCccc-cc----------cc-ccccccCHHHHHHHHHhhcceEechHHHHHHHHHHHhhhhhhhhc--
Confidence            76432221000000000 00          00 011122357899999999999999999999999999998775542  


Q ss_pred             ccCcccccchHHHHHHHHHHHHHHHHHHHHHhcccCcccccccCCCCCccCCCCCeeecCCC
Q 006532          564 EHGWEQTFVGLEACEMRNLFCCAKLVVSSALARHESRGLHYMVDFPHVEENKRLPTIILPSL  625 (641)
Q Consensus       564 ~~~~~~~~~~~~~~e~~~~l~~a~~~~~aal~R~ESRG~h~R~D~P~~d~~~~~~~~~~~~~  625 (641)
                           .+.+..    -+|++++|++|+.|||+|+||||+|||.|||.+.+++...+++.++.
T Consensus       461 -----~~~~~~----~~nl~~vA~li~~~Al~R~ESRG~H~r~D~P~~~~~~~~~~~~~~~~  513 (518)
T COG0029         461 -----ANFRVS----NRNLALVALLIARAALLRTESRGAHFRLDYPDTLPEAQRRILVTLND  513 (518)
T ss_pred             -----cccccc----ccCHHHHHHHHHHHHHhccccccceecccCCCcCccccCceEEeccc
Confidence                 011111    28999999999999999999999999999999999988888776543



>PLN02815 L-aspartate oxidase Back     alignment and domain information
>PRK07395 L-aspartate oxidase; Provisional Back     alignment and domain information
>TIGR01176 fum_red_Fp fumarate reductase, flavoprotein subunit Back     alignment and domain information
>PLN00128 Succinate dehydrogenase [ubiquinone] flavoprotein subunit Back     alignment and domain information
>PRK06452 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed Back     alignment and domain information
>PRK08626 fumarate reductase flavoprotein subunit; Provisional Back     alignment and domain information
>PRK08958 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed Back     alignment and domain information
>PTZ00139 Succinate dehydrogenase [ubiquinone] flavoprotein subunit; Provisional Back     alignment and domain information
>PRK09231 fumarate reductase flavoprotein subunit; Validated Back     alignment and domain information
>PRK07573 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed Back     alignment and domain information
>PRK08641 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed Back     alignment and domain information
>PRK07057 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed Back     alignment and domain information
>PRK09078 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed Back     alignment and domain information
>PRK09077 L-aspartate oxidase; Provisional Back     alignment and domain information
>PRK08205 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed Back     alignment and domain information
>PRK07803 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed Back     alignment and domain information
>PRK06069 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed Back     alignment and domain information
>TIGR01811 sdhA_Bsu succinate dehydrogenase or fumarate reductase, flavoprotein subunit, Bacillus subtilis subgroup Back     alignment and domain information
>PRK05945 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed Back     alignment and domain information
>PRK07804 L-aspartate oxidase; Provisional Back     alignment and domain information
>PRK07512 L-aspartate oxidase; Provisional Back     alignment and domain information
>PRK06263 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed Back     alignment and domain information
>TIGR01812 sdhA_frdA_Gneg succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup Back     alignment and domain information
>PRK05675 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed Back     alignment and domain information
>PRK08071 L-aspartate oxidase; Provisional Back     alignment and domain information
>TIGR00551 nadB L-aspartate oxidase Back     alignment and domain information
>TIGR01816 sdhA_forward succinate dehydrogenase, flavoprotein subunit, E Back     alignment and domain information
>COG1053 SdhA Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion] Back     alignment and domain information
>PRK08401 L-aspartate oxidase; Provisional Back     alignment and domain information
>TIGR02061 aprA adenosine phosphosulphate reductase, alpha subunit Back     alignment and domain information
>PRK08275 putative oxidoreductase; Provisional Back     alignment and domain information
>PRK06854 adenylylsulfate reductase subunit alpha; Validated Back     alignment and domain information
>PRK13800 putative oxidoreductase/HEAT repeat-containing protein; Provisional Back     alignment and domain information
>KOG2403 consensus Succinate dehydrogenase, flavoprotein subunit [Energy production and conversion] Back     alignment and domain information
>PRK06175 L-aspartate oxidase; Provisional Back     alignment and domain information
>KOG2404 consensus Fumarate reductase, flavoprotein subunit [Energy production and conversion] Back     alignment and domain information
>PRK06481 fumarate reductase flavoprotein subunit; Validated Back     alignment and domain information
>PTZ00306 NADH-dependent fumarate reductase; Provisional Back     alignment and domain information
>PF00890 FAD_binding_2: FAD binding domain of the Pfam family Back     alignment and domain information
>TIGR01813 flavo_cyto_c flavocytochrome c Back     alignment and domain information
>PRK07121 hypothetical protein; Validated Back     alignment and domain information
>PRK12837 3-ketosteroid-delta-1-dehydrogenase; Provisional Back     alignment and domain information
>PRK12845 3-ketosteroid-delta-1-dehydrogenase; Reviewed Back     alignment and domain information
>PRK08274 tricarballylate dehydrogenase; Validated Back     alignment and domain information
>PRK12844 3-ketosteroid-delta-1-dehydrogenase; Reviewed Back     alignment and domain information
>PRK12835 3-ketosteroid-delta-1-dehydrogenase; Reviewed Back     alignment and domain information
>PRK12834 putative FAD-binding dehydrogenase; Reviewed Back     alignment and domain information
>PRK12839 hypothetical protein; Provisional Back     alignment and domain information
>TIGR02485 CobZ_N-term precorrin 3B synthase CobZ Back     alignment and domain information
>PRK07843 3-ketosteroid-delta-1-dehydrogenase; Reviewed Back     alignment and domain information
>PRK12843 putative FAD-binding dehydrogenase; Reviewed Back     alignment and domain information
>PRK12842 putative succinate dehydrogenase; Reviewed Back     alignment and domain information
>PRK06134 putative FAD-binding dehydrogenase; Reviewed Back     alignment and domain information
>COG2081 Predicted flavoproteins [General function prediction only] Back     alignment and domain information
>PF03486 HI0933_like: HI0933-like protein; InterPro: IPR004792 This is a family of conserved hypothetical proteins that may include proteins with a dinucleotide-binding motif (Rossman fold), including oxidoreductases and dehydrogenases Back     alignment and domain information
>COG3573 Predicted oxidoreductase [General function prediction only] Back     alignment and domain information
>PF02910 Succ_DH_flav_C: Fumarate reductase flavoprotein C-term; InterPro: IPR004112 In bacteria two distinct, membrane-bound, enzyme complexes are responsible for the interconversion of fumarate and succinate (1 Back     alignment and domain information
>TIGR00275 flavoprotein, HI0933 family Back     alignment and domain information
>COG1249 Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion] Back     alignment and domain information
>TIGR01372 soxA sarcosine oxidase, alpha subunit family, heterotetrameric form Back     alignment and domain information
>TIGR03862 flavo_PP4765 uncharacterized flavoprotein, PP_4765 family Back     alignment and domain information
>TIGR01421 gluta_reduc_1 glutathione-disulfide reductase, animal/bacterial Back     alignment and domain information
>PTZ00058 glutathione reductase; Provisional Back     alignment and domain information
>TIGR01424 gluta_reduc_2 glutathione-disulfide reductase, plant Back     alignment and domain information
>PLN02546 glutathione reductase Back     alignment and domain information
>PLN02507 glutathione reductase Back     alignment and domain information
>TIGR01423 trypano_reduc trypanothione-disulfide reductase Back     alignment and domain information
>PRK06467 dihydrolipoamide dehydrogenase; Reviewed Back     alignment and domain information
>TIGR01438 TGR thioredoxin and glutathione reductase selenoprotein Back     alignment and domain information
>PRK06115 dihydrolipoamide dehydrogenase; Reviewed Back     alignment and domain information
>PLN02661 Putative thiazole synthesis Back     alignment and domain information
>PRK06116 glutathione reductase; Validated Back     alignment and domain information
>PRK06370 mercuric reductase; Validated Back     alignment and domain information
>KOG0405 consensus Pyridine nucleotide-disulphide oxidoreductase [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>COG0492 TrxB Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK06327 dihydrolipoamide dehydrogenase; Validated Back     alignment and domain information
>PRK14694 putative mercuric reductase; Provisional Back     alignment and domain information
>PRK06416 dihydrolipoamide dehydrogenase; Reviewed Back     alignment and domain information
>PRK05976 dihydrolipoamide dehydrogenase; Validated Back     alignment and domain information
>PRK05249 soluble pyridine nucleotide transhydrogenase; Provisional Back     alignment and domain information
>PRK07818 dihydrolipoamide dehydrogenase; Reviewed Back     alignment and domain information
>PRK04176 ribulose-1,5-biphosphate synthetase; Provisional Back     alignment and domain information
>PRK08010 pyridine nucleotide-disulfide oxidoreductase; Provisional Back     alignment and domain information
>PRK07845 flavoprotein disulfide reductase; Reviewed Back     alignment and domain information
>TIGR03140 AhpF alkyl hydroperoxide reductase, F subunit Back     alignment and domain information
>PTZ00153 lipoamide dehydrogenase; Provisional Back     alignment and domain information
>PRK13748 putative mercuric reductase; Provisional Back     alignment and domain information
>PRK06292 dihydrolipoamide dehydrogenase; Validated Back     alignment and domain information
>TIGR01350 lipoamide_DH dihydrolipoamide dehydrogenase Back     alignment and domain information
>PRK14727 putative mercuric reductase; Provisional Back     alignment and domain information
>TIGR02053 MerA mercuric reductase Back     alignment and domain information
>COG1635 THI4 Ribulose 1,5-bisphosphate synthetase, converts PRPP to RuBP, flavoprotein [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF01946 Thi4: Thi4 family; PDB: 1RP0_A 3FPZ_B 3JSK_K Back     alignment and domain information
>PRK06912 acoL dihydrolipoamide dehydrogenase; Validated Back     alignment and domain information
>TIGR00292 thiazole biosynthesis enzyme Back     alignment and domain information
>TIGR00136 gidA glucose-inhibited division protein A Back     alignment and domain information
>PTZ00052 thioredoxin reductase; Provisional Back     alignment and domain information
>PRK07251 pyridine nucleotide-disulfide oxidoreductase; Provisional Back     alignment and domain information
>PRK07846 mycothione reductase; Reviewed Back     alignment and domain information
>KOG4716 consensus Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG1335 consensus Dihydrolipoamide dehydrogenase [Energy production and conversion] Back     alignment and domain information
>TIGR03143 AhpF_homolog putative alkyl hydroperoxide reductase F subunit Back     alignment and domain information
>PRK05192 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; Validated Back     alignment and domain information
>PRK15317 alkyl hydroperoxide reductase subunit F; Provisional Back     alignment and domain information
>COG0644 FixC Dehydrogenases (flavoproteins) [Energy production and conversion] Back     alignment and domain information
>TIGR03452 mycothione_red mycothione reductase Back     alignment and domain information
>PRK05329 anaerobic glycerol-3-phosphate dehydrogenase subunit B; Validated Back     alignment and domain information
>PRK11101 glpA sn-glycerol-3-phosphate dehydrogenase subunit A; Provisional Back     alignment and domain information
>TIGR01292 TRX_reduct thioredoxin-disulfide reductase Back     alignment and domain information
>KOG0042 consensus Glycerol-3-phosphate dehydrogenase [Energy production and conversion] Back     alignment and domain information
>COG3634 AhpF Alkyl hydroperoxide reductase, large subunit [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>COG0578 GlpA Glycerol-3-phosphate dehydrogenase [Energy production and conversion] Back     alignment and domain information
>PRK13512 coenzyme A disulfide reductase; Provisional Back     alignment and domain information
>PRK10015 oxidoreductase; Provisional Back     alignment and domain information
>TIGR03329 Phn_aa_oxid putative aminophosphonate oxidoreductase Back     alignment and domain information
>PRK10262 thioredoxin reductase; Provisional Back     alignment and domain information
>PLN02464 glycerol-3-phosphate dehydrogenase Back     alignment and domain information
>PRK12266 glpD glycerol-3-phosphate dehydrogenase; Reviewed Back     alignment and domain information
>PF01266 DAO: FAD dependent oxidoreductase; InterPro: IPR006076 This entry includes various FAD dependent oxidoreductases: Glycerol-3-phosphate dehydrogenase (1 Back     alignment and domain information
>PRK12831 putative oxidoreductase; Provisional Back     alignment and domain information
>PRK09564 coenzyme A disulfide reductase; Reviewed Back     alignment and domain information
>PRK13369 glycerol-3-phosphate dehydrogenase; Provisional Back     alignment and domain information
>PLN02697 lycopene epsilon cyclase Back     alignment and domain information
>COG2509 Uncharacterized FAD-dependent dehydrogenases [General function prediction only] Back     alignment and domain information
>PRK09754 phenylpropionate dioxygenase ferredoxin reductase subunit; Provisional Back     alignment and domain information
>TIGR01316 gltA glutamate synthase (NADPH), homotetrameric Back     alignment and domain information
>PF01134 GIDA: Glucose inhibited division protein A; InterPro: IPR002218 GidA is a tRNA modification enzyme found in bacteria and mitochondria Back     alignment and domain information
>PF00732 GMC_oxred_N: GMC oxidoreductase; InterPro: IPR000172 The glucose-methanol-choline (GMC) oxidoreductases are FAD flavoproteins oxidoreductases [, ] Back     alignment and domain information
>PRK09853 putative selenate reductase subunit YgfK; Provisional Back     alignment and domain information
>PRK11749 dihydropyrimidine dehydrogenase subunit A; Provisional Back     alignment and domain information
>TIGR02023 BchP-ChlP geranylgeranyl reductase Back     alignment and domain information
>PRK12409 D-amino acid dehydrogenase small subunit; Provisional Back     alignment and domain information
>TIGR01373 soxB sarcosine oxidase, beta subunit family, heterotetrameric form Back     alignment and domain information
>PF12831 FAD_oxidored: FAD dependent oxidoreductase; PDB: 3ADA_A 1VRQ_A 1X31_A 3AD9_A 3AD8_A 3AD7_A 2GAG_A 2GAH_A Back     alignment and domain information
>PRK10157 putative oxidoreductase FixC; Provisional Back     alignment and domain information
>TIGR02028 ChlP geranylgeranyl reductase Back     alignment and domain information
>COG0579 Predicted dehydrogenase [General function prediction only] Back     alignment and domain information
>TIGR01320 mal_quin_oxido malate:quinone-oxidoreductase Back     alignment and domain information
>PRK06126 hypothetical protein; Provisional Back     alignment and domain information
>PRK00711 D-amino acid dehydrogenase small subunit; Validated Back     alignment and domain information
>PRK12810 gltD glutamate synthase subunit beta; Reviewed Back     alignment and domain information
>PF07992 Pyr_redox_2: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR023753 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ] Back     alignment and domain information
>PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed Back     alignment and domain information
>PRK04965 NADH:flavorubredoxin oxidoreductase; Provisional Back     alignment and domain information
>PRK12779 putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase; Provisional Back     alignment and domain information
>PRK07364 2-octaprenyl-6-methoxyphenyl hydroxylase; Validated Back     alignment and domain information
>PRK14989 nitrite reductase subunit NirD; Provisional Back     alignment and domain information
>PRK11728 hydroxyglutarate oxidase; Provisional Back     alignment and domain information
>PRK05257 malate:quinone oxidoreductase; Validated Back     alignment and domain information
>PLN02463 lycopene beta cyclase Back     alignment and domain information
>TIGR03315 Se_ygfK putative selenate reductase, YgfK subunit Back     alignment and domain information
>PLN00093 geranylgeranyl diphosphate reductase; Provisional Back     alignment and domain information
>PRK12775 putative trifunctional 2-polyprenylphenol hydroxylase/glutamate synthase subunit beta/ferritin domain-containing protein; Provisional Back     alignment and domain information
>TIGR03364 HpnW_proposed FAD dependent oxidoreductase TIGR03364 Back     alignment and domain information
>TIGR01377 soxA_mon sarcosine oxidase, monomeric form Back     alignment and domain information
>KOG1298 consensus Squalene monooxygenase [Lipid transport and metabolism] Back     alignment and domain information
>PRK12778 putative bifunctional 2-polyprenylphenol hydroxylase/glutamate synthase subunit beta; Provisional Back     alignment and domain information
>PRK01747 mnmC bifunctional tRNA (mnm(5)s(2)U34)-methyltransferase/FAD-dependent cmnm(5)s(2)U34 oxidoreductase; Reviewed Back     alignment and domain information
>PRK12770 putative glutamate synthase subunit beta; Provisional Back     alignment and domain information
>PRK12814 putative NADPH-dependent glutamate synthase small subunit; Provisional Back     alignment and domain information
>PRK13977 myosin-cross-reactive antigen; Provisional Back     alignment and domain information
>TIGR02032 GG-red-SF geranylgeranyl reductase family Back     alignment and domain information
>KOG0404 consensus Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK11259 solA N-methyltryptophan oxidase; Provisional Back     alignment and domain information
>PRK13339 malate:quinone oxidoreductase; Reviewed Back     alignment and domain information
>PRK06185 hypothetical protein; Provisional Back     alignment and domain information
>KOG2415 consensus Electron transfer flavoprotein ubiquinone oxidoreductase [Energy production and conversion] Back     alignment and domain information
>PF01494 FAD_binding_3: FAD binding domain; InterPro: IPR002938 Monooxygenases incorporate one hydroxyl group into substrates and are found in many metabolic pathways Back     alignment and domain information
>PLN02985 squalene monooxygenase Back     alignment and domain information
>PRK13984 putative oxidoreductase; Provisional Back     alignment and domain information
>COG0665 DadA Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism] Back     alignment and domain information
>PRK09126 hypothetical protein; Provisional Back     alignment and domain information
>TIGR02374 nitri_red_nirB nitrite reductase [NAD(P)H], large subunit Back     alignment and domain information
>PRK06834 hypothetical protein; Provisional Back     alignment and domain information
>TIGR01317 GOGAT_sm_gam glutamate synthases, NADH/NADPH, small subunit Back     alignment and domain information
>TIGR03378 glycerol3P_GlpB glycerol-3-phosphate dehydrogenase, anaerobic, B subunit Back     alignment and domain information
>PRK06183 mhpA 3-(3-hydroxyphenyl)propionate hydroxylase; Validated Back     alignment and domain information
>PRK06184 hypothetical protein; Provisional Back     alignment and domain information
>COG0445 GidA Flavin-dependent tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Cell cycle control, cell division, chromosome partitioning] Back     alignment and domain information
>COG0654 UbiH 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion] Back     alignment and domain information
>PRK07045 putative monooxygenase; Reviewed Back     alignment and domain information
>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial Back     alignment and domain information
>PTZ00318 NADH dehydrogenase-like protein; Provisional Back     alignment and domain information
>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed Back     alignment and domain information
>PRK08244 hypothetical protein; Provisional Back     alignment and domain information
>PTZ00383 malate:quinone oxidoreductase; Provisional Back     alignment and domain information
>PRK07190 hypothetical protein; Provisional Back     alignment and domain information
>PRK05335 tRNA (uracil-5-)-methyltransferase Gid; Reviewed Back     alignment and domain information
>PRK08773 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Validated Back     alignment and domain information
>PRK07608 ubiquinone biosynthesis hydroxylase family protein; Provisional Back     alignment and domain information
>PRK11445 putative oxidoreductase; Provisional Back     alignment and domain information
>PRK02106 choline dehydrogenase; Validated Back     alignment and domain information
>PRK06617 2-octaprenyl-6-methoxyphenyl hydroxylase; Validated Back     alignment and domain information
>PRK08849 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Provisional Back     alignment and domain information
>PRK08132 FAD-dependent oxidoreductase; Provisional Back     alignment and domain information
>PRK08013 oxidoreductase; Provisional Back     alignment and domain information
>PRK08243 4-hydroxybenzoate 3-monooxygenase; Validated Back     alignment and domain information
>PRK07333 2-octaprenyl-6-methoxyphenyl hydroxylase; Provisional Back     alignment and domain information
>TIGR03169 Nterm_to_SelD pyridine nucleotide-disulfide oxidoreductase family protein Back     alignment and domain information
>PRK08020 ubiF 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Reviewed Back     alignment and domain information
>TIGR01988 Ubi-OHases Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family Back     alignment and domain information
>PRK07494 2-octaprenyl-6-methoxyphenyl hydroxylase; Provisional Back     alignment and domain information
>PRK06847 hypothetical protein; Provisional Back     alignment and domain information
>PRK05732 2-octaprenyl-6-methoxyphenyl hydroxylase; Validated Back     alignment and domain information
>TIGR01810 betA choline dehydrogenase Back     alignment and domain information
>TIGR02730 carot_isom carotene isomerase Back     alignment and domain information
>PRK07538 hypothetical protein; Provisional Back     alignment and domain information
>PRK08163 salicylate hydroxylase; Provisional Back     alignment and domain information
>PRK05714 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Provisional Back     alignment and domain information
>TIGR02462 pyranose_ox pyranose oxidase Back     alignment and domain information
>TIGR02360 pbenz_hydroxyl 4-hydroxybenzoate 3-monooxygenase Back     alignment and domain information
>PF13738 Pyr_redox_3: Pyridine nucleotide-disulphide oxidoreductase; PDB: 3D1C_A 4A9W_B 2YLX_A 2YM2_A 2YLW_A 2YLR_A 2YM1_A 2YLS_A 1W4X_A 2YLT_A Back     alignment and domain information
>TIGR01984 UbiH 2-polyprenyl-6-methoxyphenol 4-hydroxylase Back     alignment and domain information
>PRK08850 2-octaprenyl-6-methoxyphenol hydroxylase; Validated Back     alignment and domain information
>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional Back     alignment and domain information
>PLN02785 Protein HOTHEAD Back     alignment and domain information
>PRK09897 hypothetical protein; Provisional Back     alignment and domain information
>PTZ00367 squalene epoxidase; Provisional Back     alignment and domain information
>KOG2853 consensus Possible oxidoreductase [General function prediction only] Back     alignment and domain information
>KOG2311 consensus NAD/FAD-utilizing protein possibly involved in translation [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>TIGR01790 carotene-cycl lycopene cyclase family protein Back     alignment and domain information
>PRK06996 hypothetical protein; Provisional Back     alignment and domain information
>COG1233 Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>PRK06475 salicylate hydroxylase; Provisional Back     alignment and domain information
>PLN02172 flavin-containing monooxygenase FMO GS-OX Back     alignment and domain information
>KOG2960 consensus Protein involved in thiamine biosynthesis and DNA damage tolerance [General function prediction only] Back     alignment and domain information
>PRK07236 hypothetical protein; Provisional Back     alignment and domain information
>KOG1336 consensus Monodehydroascorbate/ferredoxin reductase [General function prediction only] Back     alignment and domain information
>TIGR01989 COQ6 Ubiquinone biosynthesis mono0xygenase COQ6 Back     alignment and domain information
>COG3075 GlpB Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism] Back     alignment and domain information
>PRK07588 hypothetical protein; Provisional Back     alignment and domain information
>KOG2844 consensus Dimethylglycine dehydrogenase precursor [Amino acid transport and metabolism] Back     alignment and domain information
>TIGR02733 desat_CrtD C-3',4' desaturase CrtD Back     alignment and domain information
>PRK08294 phenol 2-monooxygenase; Provisional Back     alignment and domain information
>KOG2820 consensus FAD-dependent oxidoreductase [General function prediction only] Back     alignment and domain information
>PRK07208 hypothetical protein; Provisional Back     alignment and domain information
>PRK06753 hypothetical protein; Provisional Back     alignment and domain information
>COG1252 Ndh NADH dehydrogenase, FAD-containing subunit [Energy production and conversion] Back     alignment and domain information
>PRK05868 hypothetical protein; Validated Back     alignment and domain information
>TIGR02731 phytoene_desat phytoene desaturase Back     alignment and domain information
>PF06039 Mqo: Malate:quinone oxidoreductase (Mqo); InterPro: IPR006231 The membrane-associated enzyme, malate:quinone-oxidoreductase, is an alternative to the better-known NAD-dependent malate dehydrogenase as part of the TCA cycle Back     alignment and domain information
>TIGR02734 crtI_fam phytoene desaturase Back     alignment and domain information
>COG3380 Predicted NAD/FAD-dependent oxidoreductase [General function prediction only] Back     alignment and domain information
>COG2303 BetA Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] Back     alignment and domain information
>PLN02927 antheraxanthin epoxidase/zeaxanthin epoxidase Back     alignment and domain information
>PLN02612 phytoene desaturase Back     alignment and domain information
>TIGR03219 salicylate_mono salicylate 1-monooxygenase Back     alignment and domain information
>KOG1238 consensus Glucose dehydrogenase/choline dehydrogenase/mandelonitrile lyase (GMC oxidoreductase family) [General function prediction only] Back     alignment and domain information
>TIGR03377 glycerol3P_GlpA glycerol-3-phosphate dehydrogenase, anaerobic, A subunit Back     alignment and domain information
>PTZ00363 rab-GDP dissociation inhibitor; Provisional Back     alignment and domain information
>PF05834 Lycopene_cycl: Lycopene cyclase protein; InterPro: IPR008671 This family consists of lycopene beta and epsilon cyclase proteins Back     alignment and domain information
>PF04820 Trp_halogenase: Tryptophan halogenase; InterPro: IPR006905 Tryptophan halogenase catalyses the chlorination of tryptophan to form 7-chlorotryptophan Back     alignment and domain information
>COG2072 TrkA Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism] Back     alignment and domain information
>PF13450 NAD_binding_8: NAD(P)-binding Rossmann-like domain; PDB: 3KA7_A 1V0J_D 3INR_B 3KYB_B 3GF4_A 2BI8_A 3INT_B 1WAM_A 2BI7_A 3MJ4_G Back     alignment and domain information
>KOG2614 consensus Kynurenine 3-monooxygenase and related flavoprotein monooxygenases [Energy production and conversion; General function prediction only] Back     alignment and domain information
>TIGR02732 zeta_caro_desat carotene 7,8-desaturase Back     alignment and domain information
>KOG2852 consensus Possible oxidoreductase [General function prediction only] Back     alignment and domain information
>PF13454 NAD_binding_9: FAD-NAD(P)-binding Back     alignment and domain information
>TIGR01789 lycopene_cycl lycopene cyclase Back     alignment and domain information
>COG1148 HdrA Heterodisulfide reductase, subunit A and related polyferredoxins [Energy production and conversion] Back     alignment and domain information
>KOG1399 consensus Flavin-containing monooxygenase [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>PRK08255 salicylyl-CoA 5-hydroxylase; Reviewed Back     alignment and domain information
>COG1251 NirB NAD(P)H-nitrite reductase [Energy production and conversion] Back     alignment and domain information
>PF00743 FMO-like: Flavin-binding monooxygenase-like; InterPro: IPR020946 Flavin-containing monooxygenases (FMOs) constitute a family of xenobiotic-metabolising enzymes [] Back     alignment and domain information
>PRK06567 putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase; Validated Back     alignment and domain information
>PLN02487 zeta-carotene desaturase Back     alignment and domain information
>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ] Back     alignment and domain information
>COG1232 HemY Protoporphyrinogen oxidase [Coenzyme metabolism] Back     alignment and domain information
>KOG4254 consensus Phytoene desaturase [Coenzyme transport and metabolism] Back     alignment and domain information
>TIGR00031 UDP-GALP_mutase UDP-galactopyranose mutase Back     alignment and domain information
>TIGR03197 MnmC_Cterm tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain Back     alignment and domain information
>PRK05976 dihydrolipoamide dehydrogenase; Validated Back     alignment and domain information
>TIGR02352 thiamin_ThiO glycine oxidase ThiO Back     alignment and domain information
>KOG0029 consensus Amine oxidase [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>PRK07233 hypothetical protein; Provisional Back     alignment and domain information
>PLN02576 protoporphyrinogen oxidase Back     alignment and domain information
>PF13434 K_oxygenase: L-lysine 6-monooxygenase (NADPH-requiring); PDB: 3S61_B 3S5W_B Back     alignment and domain information
>PF13434 K_oxygenase: L-lysine 6-monooxygenase (NADPH-requiring); PDB: 3S61_B 3S5W_B Back     alignment and domain information
>COG0562 Glf UDP-galactopyranose mutase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PLN02268 probable polyamine oxidase Back     alignment and domain information
>PF06100 Strep_67kDa_ant: Streptococcal 67 kDa myosin-cross-reactive antigen like family ; InterPro: IPR010354 Members of this family are thought to have structural features in common with the beta chain of the class II antigens, as well as myosin, and may play an important role in the pathogenesis [] Back     alignment and domain information
>TIGR00562 proto_IX_ox protoporphyrinogen oxidase Back     alignment and domain information
>TIGR01350 lipoamide_DH dihydrolipoamide dehydrogenase Back     alignment and domain information
>TIGR03140 AhpF alkyl hydroperoxide reductase, F subunit Back     alignment and domain information
>PRK15317 alkyl hydroperoxide reductase subunit F; Provisional Back     alignment and domain information
>PRK06416 dihydrolipoamide dehydrogenase; Reviewed Back     alignment and domain information
>TIGR03385 CoA_CoA_reduc CoA-disulfide reductase Back     alignment and domain information
>PRK06912 acoL dihydrolipoamide dehydrogenase; Validated Back     alignment and domain information
>PRK06115 dihydrolipoamide dehydrogenase; Reviewed Back     alignment and domain information
>TIGR01316 gltA glutamate synthase (NADPH), homotetrameric Back     alignment and domain information
>COG4529 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>TIGR02053 MerA mercuric reductase Back     alignment and domain information
>PRK07818 dihydrolipoamide dehydrogenase; Reviewed Back     alignment and domain information
>PRK11883 protoporphyrinogen oxidase; Reviewed Back     alignment and domain information
>PRK06370 mercuric reductase; Validated Back     alignment and domain information
>TIGR01292 TRX_reduct thioredoxin-disulfide reductase Back     alignment and domain information
>PRK12831 putative oxidoreductase; Provisional Back     alignment and domain information
>COG3349 Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>KOG2665 consensus Predicted FAD-dependent oxidoreductase [Function unknown] Back     alignment and domain information
>COG1231 Monoamine oxidase [Amino acid transport and metabolism] Back     alignment and domain information
>PRK04965 NADH:flavorubredoxin oxidoreductase; Provisional Back     alignment and domain information
>PRK06116 glutathione reductase; Validated Back     alignment and domain information
>PRK06327 dihydrolipoamide dehydrogenase; Validated Back     alignment and domain information
>PRK07251 pyridine nucleotide-disulfide oxidoreductase; Provisional Back     alignment and domain information
>PLN02852 ferredoxin-NADP+ reductase Back     alignment and domain information
>PRK12416 protoporphyrinogen oxidase; Provisional Back     alignment and domain information
>PRK10262 thioredoxin reductase; Provisional Back     alignment and domain information
>PLN02676 polyamine oxidase Back     alignment and domain information
>PRK09754 phenylpropionate dioxygenase ferredoxin reductase subunit; Provisional Back     alignment and domain information
>TIGR00137 gid_trmFO tRNA:m(5)U-54 methyltransferase Back     alignment and domain information
>PRK05249 soluble pyridine nucleotide transhydrogenase; Provisional Back     alignment and domain information
>KOG1346 consensus Programmed cell death 8 (apoptosis-inducing factor) [Signal transduction mechanisms] Back     alignment and domain information
>TIGR01421 gluta_reduc_1 glutathione-disulfide reductase, animal/bacterial Back     alignment and domain information
>PLN02328 lysine-specific histone demethylase 1 homolog Back     alignment and domain information
>COG1249 Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion] Back     alignment and domain information
>PLN02529 lysine-specific histone demethylase 1 Back     alignment and domain information
>PLN02568 polyamine oxidase Back     alignment and domain information
>PTZ00058 glutathione reductase; Provisional Back     alignment and domain information
>PRK09564 coenzyme A disulfide reductase; Reviewed Back     alignment and domain information
>TIGR01424 gluta_reduc_2 glutathione-disulfide reductase, plant Back     alignment and domain information
>PRK14989 nitrite reductase subunit NirD; Provisional Back     alignment and domain information
>COG0446 HcaD Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only] Back     alignment and domain information
>PLN02507 glutathione reductase Back     alignment and domain information
>PRK14694 putative mercuric reductase; Provisional Back     alignment and domain information
>TIGR01438 TGR thioredoxin and glutathione reductase selenoprotein Back     alignment and domain information
>COG0446 HcaD Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only] Back     alignment and domain information
>PTZ00153 lipoamide dehydrogenase; Provisional Back     alignment and domain information
>TIGR02374 nitri_red_nirB nitrite reductase [NAD(P)H], large subunit Back     alignment and domain information
>TIGR03385 CoA_CoA_reduc CoA-disulfide reductase Back     alignment and domain information
>PRK14727 putative mercuric reductase; Provisional Back     alignment and domain information
>PRK06467 dihydrolipoamide dehydrogenase; Reviewed Back     alignment and domain information
>PRK06292 dihydrolipoamide dehydrogenase; Validated Back     alignment and domain information
>TIGR01423 trypano_reduc trypanothione-disulfide reductase Back     alignment and domain information
>PRK12778 putative bifunctional 2-polyprenylphenol hydroxylase/glutamate synthase subunit beta; Provisional Back     alignment and domain information
>PRK07845 flavoprotein disulfide reductase; Reviewed Back     alignment and domain information
>PRK12810 gltD glutamate synthase subunit beta; Reviewed Back     alignment and domain information
>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial Back     alignment and domain information
>PRK11749 dihydropyrimidine dehydrogenase subunit A; Provisional Back     alignment and domain information
>PRK08010 pyridine nucleotide-disulfide oxidoreductase; Provisional Back     alignment and domain information
>PRK07846 mycothione reductase; Reviewed Back     alignment and domain information
>KOG1276 consensus Protoporphyrinogen oxidase [Coenzyme transport and metabolism] Back     alignment and domain information
>TIGR03143 AhpF_homolog putative alkyl hydroperoxide reductase F subunit Back     alignment and domain information
>KOG0685 consensus Flavin-containing amine oxidase [Coenzyme transport and metabolism] Back     alignment and domain information
>PRK13748 putative mercuric reductase; Provisional Back     alignment and domain information
>COG2907 Predicted NAD/FAD-binding protein [General function prediction only] Back     alignment and domain information
>COG3634 AhpF Alkyl hydroperoxide reductase, large subunit [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK12770 putative glutamate synthase subunit beta; Provisional Back     alignment and domain information
>PRK12779 putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase; Provisional Back     alignment and domain information
>PLN02546 glutathione reductase Back     alignment and domain information
>PTZ00052 thioredoxin reductase; Provisional Back     alignment and domain information
>PRK13512 coenzyme A disulfide reductase; Provisional Back     alignment and domain information
>PTZ00188 adrenodoxin reductase; Provisional Back     alignment and domain information
>TIGR03452 mycothione_red mycothione reductase Back     alignment and domain information
>PRK12775 putative trifunctional 2-polyprenylphenol hydroxylase/glutamate synthase subunit beta/ferritin domain-containing protein; Provisional Back     alignment and domain information
>PLN02976 amine oxidase Back     alignment and domain information
>COG0493 GltD NADPH-dependent glutamate synthase beta chain and related oxidoreductases [Amino acid transport and metabolism / General function prediction only] Back     alignment and domain information
>PLN03000 amine oxidase Back     alignment and domain information
>KOG1335 consensus Dihydrolipoamide dehydrogenase [Energy production and conversion] Back     alignment and domain information
>COG1252 Ndh NADH dehydrogenase, FAD-containing subunit [Energy production and conversion] Back     alignment and domain information
>PTZ00318 NADH dehydrogenase-like protein; Provisional Back     alignment and domain information
>KOG2495 consensus NADH-dehydrogenase (ubiquinone) [Energy production and conversion] Back     alignment and domain information
>KOG3855 consensus Monooxygenase involved in coenzyme Q (ubiquinone) biosynthesis [Coenzyme transport and metabolism; Energy production and conversion] Back     alignment and domain information
>COG0492 TrxB Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG1336 consensus Monodehydroascorbate/ferredoxin reductase [General function prediction only] Back     alignment and domain information
>PRK12814 putative NADPH-dependent glutamate synthase small subunit; Provisional Back     alignment and domain information
>TIGR01372 soxA sarcosine oxidase, alpha subunit family, heterotetrameric form Back     alignment and domain information
>COG3486 IucD Lysine/ornithine N-monooxygenase [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional Back     alignment and domain information
>KOG0399 consensus Glutamate synthase [Amino acid transport and metabolism] Back     alignment and domain information
>PF00996 GDI: GDP dissociation inhibitor; InterPro: IPR018203 Rab proteins constitute a family of small GTPases that serve a regulatory role in vesicular membrane traffic [, ]; C-terminal geranylgeranylation is crucial for their membrane association and function Back     alignment and domain information
>PRK13984 putative oxidoreductase; Provisional Back     alignment and domain information
>TIGR03169 Nterm_to_SelD pyridine nucleotide-disulfide oxidoreductase family protein Back     alignment and domain information
>KOG1800 consensus Ferredoxin/adrenodoxin reductase [Nucleotide transport and metabolism] Back     alignment and domain information
>TIGR03315 Se_ygfK putative selenate reductase, YgfK subunit Back     alignment and domain information
>TIGR01317 GOGAT_sm_gam glutamate synthases, NADH/NADPH, small subunit Back     alignment and domain information
>COG3486 IucD Lysine/ornithine N-monooxygenase [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>PLN02852 ferredoxin-NADP+ reductase Back     alignment and domain information
>KOG0404 consensus Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK09853 putative selenate reductase subunit YgfK; Provisional Back     alignment and domain information
>COG1206 Gid NAD(FAD)-utilizing enzyme possibly involved in translation [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>KOG2755 consensus Oxidoreductase [General function prediction only] Back     alignment and domain information
>KOG3851 consensus Sulfide:quinone oxidoreductase/flavo-binding protein [Energy production and conversion] Back     alignment and domain information
>PRK02705 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional Back     alignment and domain information
>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional Back     alignment and domain information
>COG1251 NirB NAD(P)H-nitrite reductase [Energy production and conversion] Back     alignment and domain information
>PF13738 Pyr_redox_3: Pyridine nucleotide-disulphide oxidoreductase; PDB: 3D1C_A 4A9W_B 2YLX_A 2YM2_A 2YLW_A 2YLR_A 2YM1_A 2YLS_A 1W4X_A 2YLT_A Back     alignment and domain information
>KOG4405 consensus GDP dissociation inhibitor [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>KOG2755 consensus Oxidoreductase [General function prediction only] Back     alignment and domain information
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate Back     alignment and domain information
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B Back     alignment and domain information
>PF01134 GIDA: Glucose inhibited division protein A; InterPro: IPR002218 GidA is a tRNA modification enzyme found in bacteria and mitochondria Back     alignment and domain information
>COG5044 MRS6 RAB proteins geranylgeranyltransferase component A (RAB escort protein) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF01593 Amino_oxidase: Flavin containing amine oxidoreductase This is a subset of the Pfam family; InterPro: IPR002937 This entry consists of various amine oxidases, including maize polyamine oxidase (PAO) [], L-amino acid oxidases (LAO) and various flavin containing monoamine oxidases (MAO) Back     alignment and domain information
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases Back     alignment and domain information
>KOG2495 consensus NADH-dehydrogenase (ubiquinone) [Energy production and conversion] Back     alignment and domain information
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain Back     alignment and domain information
>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1 Back     alignment and domain information
>PRK15116 sulfur acceptor protein CsdL; Provisional Back     alignment and domain information
>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1 Back     alignment and domain information
>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1 Back     alignment and domain information
>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB Back     alignment and domain information
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG1439 consensus RAB proteins geranylgeranyltransferase component A (RAB escort protein) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG4716 consensus Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>TIGR00292 thiazole biosynthesis enzyme Back     alignment and domain information
>TIGR00518 alaDH alanine dehydrogenase Back     alignment and domain information
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional Back     alignment and domain information
>COG3075 GlpB Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism] Back     alignment and domain information
>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism] Back     alignment and domain information
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional Back     alignment and domain information
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2 Back     alignment and domain information
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional Back     alignment and domain information
>PRK06718 precorrin-2 dehydrogenase; Reviewed Back     alignment and domain information
>cd01487 E1_ThiF_like E1_ThiF_like Back     alignment and domain information
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP Back     alignment and domain information
>COG1635 THI4 Ribulose 1,5-bisphosphate synthetase, converts PRPP to RuBP, flavoprotein [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK04176 ribulose-1,5-biphosphate synthetase; Provisional Back     alignment and domain information
>PRK06719 precorrin-2 dehydrogenase; Validated Back     alignment and domain information
>PRK12549 shikimate 5-dehydrogenase; Reviewed Back     alignment and domain information
>PRK08328 hypothetical protein; Provisional Back     alignment and domain information
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated Back     alignment and domain information
>PRK08223 hypothetical protein; Validated Back     alignment and domain information
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E Back     alignment and domain information
>KOG3923 consensus D-aspartate oxidase [Amino acid transport and metabolism] Back     alignment and domain information
>PRK08644 thiamine biosynthesis protein ThiF; Provisional Back     alignment and domain information
>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins Back     alignment and domain information
>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional Back     alignment and domain information
>TIGR03378 glycerol3P_GlpB glycerol-3-phosphate dehydrogenase, anaerobic, B subunit Back     alignment and domain information
>PRK12550 shikimate 5-dehydrogenase; Reviewed Back     alignment and domain information
>PRK12548 shikimate 5-dehydrogenase; Provisional Back     alignment and domain information
>PRK14027 quinate/shikimate dehydrogenase; Provisional Back     alignment and domain information
>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only] Back     alignment and domain information
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy) Back     alignment and domain information
>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ] Back     alignment and domain information
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus Back     alignment and domain information
>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query641
1chu_A540 Structure Of L-Aspartate Oxidase: Implications For 1e-111
1knp_A540 E. Coli L-aspartate Oxidase: Mutant R386l In Comple 1e-111
2e5v_A472 Crystal Structure Of L-Aspartate Oxidase From Hyper 8e-65
1zoy_A622 Crystal Structure Of Mitochondrial Respiratory Comp 2e-62
1nek_A588 Complex Ii (Succinate Dehydrogenase) From E. Coli W 6e-62
2b76_A602 E. Coli Quinol Fumarate Reductase Frda E49q Mutatio 7e-62
3p4r_A577 Crystal Structure Of Menaquinol:fumarate Oxidoreduc 2e-61
1kf6_A602 E. Coli Quinol-Fumarate Reductase With Bound Inhibi 2e-61
3cir_A602 E. Coli Quinol Fumarate Reductase Frda T234a Mutati 6e-61
1yq3_A621 Avian Respiratory Complex Ii With Oxaloacetate And 7e-61
1e7p_A656 Quinol:fumarate Reductase From Wolinella Succinogen 1e-58
2bs2_A660 Quinol:fumarate Reductase From Wolinella Succinogen 1e-58
1qlb_A656 Respiratory Complex Ii-Like Fumarate Reductase From 3e-58
3vr8_A645 Mitochondrial Rhodoquinol-Fumarate Reductase From T 7e-57
1qo8_A566 The Structure Of The Open Conformation Of A Flavocy 1e-20
1ksu_A571 Crystal Structure Of His505tyr Mutant Flavocytochro 4e-17
1p2h_A571 H61m Mutant Of Flavocytochrome C3 Length = 571 2e-16
1p2e_A571 H61a Mutant Of Flavocytochrome C3 Length = 571 2e-16
1qjd_A571 Flavocytochrome C3 From Shewanella Frigidimarina Le 2e-16
1jrz_A571 Crystal Structure Of Arg402tyr Mutant Flavocytochro 3e-16
1jry_A571 Crystal Structure Of Arg402lys Mutant Flavocytochro 6e-16
1kss_A571 Crystal Structure Of His505ala Mutant Flavocytochro 6e-16
2b7s_A571 R381k Mutant Of Flavocytochrome C3 Length = 571 6e-16
1jrx_A571 Crystal Structure Of Arg402ala Mutant Flavocytochro 6e-16
2b7r_A571 Structure Of E378d Mutant Flavocytochrome C3 Length 6e-16
1q9i_A571 The A251c:s430c Double Mutant Of Flavocytochrome C3 1e-15
1e39_A571 Flavocytochrome C3 From Shewanella Frigidimarina Hi 3e-15
1m64_A571 Crystal Structure Of Q363f Mutant Flavocytochrome C 4e-15
1d4c_A572 Crystal Structure Of The Uncomplexed Form Of The Fl 6e-15
1lj1_A571 Crystal Structure Of Q363fR402A MUTANT FLAVOCYTOCHR 8e-15
1d4d_A572 Crystal Structure Of The Succinate Complexed Form O 1e-14
>pdb|1CHU|A Chain A, Structure Of L-Aspartate Oxidase: Implications For The Succinate Dehydrogenase FUMARATE REDUCATSE FAMILY Length = 540 Back     alignment and structure

Iteration: 1

Score = 400 bits (1028), Expect = e-111, Method: Compositional matrix adjust. Identities = 240/568 (42%), Positives = 328/568 (57%), Gaps = 45/568 (7%) Query: 66 LRTVPVLSCLRDGSVKYFDFSVIGSGVAGLCYALEVAKHGTVAVITKAEPHESNTNYAQG 125 + T+P SC D +IGSG AGL AL +A V V++K E +T YAQG Sbjct: 1 MNTLPEHSC---------DVLIIGSGAAGLSLALRLADQHQVIVLSKGPVTEGSTFYAQG 51 Query: 126 GVSAVLCPSDSVESHMQDTIVAGAYLCDDETVRVVCTEGPDRIRELIAIGASFD-----R 180 G++AV +DS++SH++DT++AGA +CD V V + ++ LI G FD Sbjct: 52 GIAAVFDETDSIDSHVEDTLIAGAGICDRHAVEFVASNARSCVQWLIDQGVLFDTHIQPN 111 Query: 181 GEDGNLHLAREGGHSHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTT-- 238 GE+ + HL REGGHSH RI+HAAD TGRE+E L+ ++ PNI V E A+DL+ + Sbjct: 112 GEE-SYHLTREGGHSHRRILHAADATGREVETTLVSKALNHPNIRVLERTNAVDLIVSDK 170 Query: 239 --LDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAH 296 L G V G N + V +K +LA+GGA +Y TTNP +++GDG+AMA Sbjct: 171 IGLPGTRRVV-GAWVWNRNKETVETCHAKAVVLATGGASKVYQYTTNPDISSGDGIAMAW 229 Query: 297 RAQAVISNMEFVQFHPTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPL 356 RA ++N+EF QFHPTAL + +FL+TEA+RG+G L RFMP Sbjct: 230 RAGCRVANLEFNQFHPTAL---------YHPQARNFLLTEALRGEGAYLKRPDGTRFMPD 280 Query: 357 YDERAELAPRDVVARSIDDQLKKRNEKYVLLDISHKPTEKILSHFPNIAAECLKYGLDIT 416 +DER ELAPRD+VAR+ID ++K+ + LDISHKP + I HFP I + L G+D+T Sbjct: 281 FDERGELAPRDIVARAIDHEMKRLGADCMFLDISHKPADFIRQHFPMIYEKLLGLGIDLT 340 Query: 417 SQPIPVVPAAHYMCGGVRAGLQGETNVRGLYVAGEVACTGLHGANRLASNSLLEALVFAR 476 +P+P+VPAAHY CGGV G T+V GLY GEV+ TGLHGANR+ASNSLLE LV+ Sbjct: 341 QEPVPIVPAAHYTCGGVMVDDHGRTDVEGLYAIGEVSYTGLHGANRMASNSLLECLVYGW 400 Query: 477 RAVQPSIDHKKSTSIDLSASNWWTRTVVPK-SLGCNVMHNILRRTKEVRKELQSIMWRYV 535 A + I + + D+S W + V + HN EL+ MW YV Sbjct: 401 SAAE-DITRRMPYAHDISTLPPWDESRVENPDERVVIQHNW--------HELRLFMWDYV 451 Query: 536 GIVRSTTSLQTAEWRIDELEAEWETYLFEHGWEQTFVGLEACEMRNLFCCAKLVVSSALA 595 GIVR+T L+ A RI L+ E + Y + V E+RNL A+L+V A+ Sbjct: 452 GIVRTTKRLERALRRITMLQQEIDEY-----YAHFRVSNNLLELRNLVQVAELIVRCAMM 506 Query: 596 RHESRGLHYMVDFPHVEENKRLPTIILP 623 R ESRGLH+ +D+P + + P+I+ P Sbjct: 507 RKESRGLHFTLDYPELLTHSG-PSILSP 533
>pdb|1KNP|A Chain A, E. Coli L-aspartate Oxidase: Mutant R386l In Complex With Succinate Length = 540 Back     alignment and structure
>pdb|2E5V|A Chain A, Crystal Structure Of L-Aspartate Oxidase From Hyperthermophilic Archaeon Sulfolobus Tokodaii Length = 472 Back     alignment and structure
>pdb|1ZOY|A Chain A, Crystal Structure Of Mitochondrial Respiratory Complex Ii From Porcine Heart At 2.4 Angstroms Length = 622 Back     alignment and structure
>pdb|1NEK|A Chain A, Complex Ii (Succinate Dehydrogenase) From E. Coli With Ubiquinone Bound Length = 588 Back     alignment and structure
>pdb|2B76|A Chain A, E. Coli Quinol Fumarate Reductase Frda E49q Mutation Length = 602 Back     alignment and structure
>pdb|3P4R|A Chain A, Crystal Structure Of Menaquinol:fumarate Oxidoreductase In Complex With Glutarate Length = 577 Back     alignment and structure
>pdb|1KF6|A Chain A, E. Coli Quinol-Fumarate Reductase With Bound Inhibitor Hqno Length = 602 Back     alignment and structure
>pdb|3CIR|A Chain A, E. Coli Quinol Fumarate Reductase Frda T234a Mutation Length = 602 Back     alignment and structure
>pdb|1YQ3|A Chain A, Avian Respiratory Complex Ii With Oxaloacetate And Ubiquinone Length = 621 Back     alignment and structure
>pdb|1E7P|A Chain A, Quinol:fumarate Reductase From Wolinella Succinogenes Length = 656 Back     alignment and structure
>pdb|2BS2|A Chain A, Quinol:fumarate Reductase From Wolinella Succinogenes Length = 660 Back     alignment and structure
>pdb|1QLB|A Chain A, Respiratory Complex Ii-Like Fumarate Reductase From Wolinella Succinogenes Length = 656 Back     alignment and structure
>pdb|3VR8|A Chain A, Mitochondrial Rhodoquinol-Fumarate Reductase From The Parasitic Nematode Ascaris Suum Length = 645 Back     alignment and structure
>pdb|1QO8|A Chain A, The Structure Of The Open Conformation Of A Flavocytochrome C3 Fumarate Reductase Length = 566 Back     alignment and structure
>pdb|1KSU|A Chain A, Crystal Structure Of His505tyr Mutant Flavocytochrome C3 From Shewanella Frigidimarina Length = 571 Back     alignment and structure
>pdb|1P2H|A Chain A, H61m Mutant Of Flavocytochrome C3 Length = 571 Back     alignment and structure
>pdb|1P2E|A Chain A, H61a Mutant Of Flavocytochrome C3 Length = 571 Back     alignment and structure
>pdb|1QJD|A Chain A, Flavocytochrome C3 From Shewanella Frigidimarina Length = 571 Back     alignment and structure
>pdb|1JRZ|A Chain A, Crystal Structure Of Arg402tyr Mutant Flavocytochrome C3 From Shewanella Frigidimarina Length = 571 Back     alignment and structure
>pdb|1JRY|A Chain A, Crystal Structure Of Arg402lys Mutant Flavocytochrome C3 From Shewanella Frigidimarina Length = 571 Back     alignment and structure
>pdb|1KSS|A Chain A, Crystal Structure Of His505ala Mutant Flavocytochrome C3 From Shewanella Frigidimarina Length = 571 Back     alignment and structure
>pdb|2B7S|A Chain A, R381k Mutant Of Flavocytochrome C3 Length = 571 Back     alignment and structure
>pdb|1JRX|A Chain A, Crystal Structure Of Arg402ala Mutant Flavocytochrome C3 From Shewanella Frigidimarina Length = 571 Back     alignment and structure
>pdb|2B7R|A Chain A, Structure Of E378d Mutant Flavocytochrome C3 Length = 571 Back     alignment and structure
>pdb|1Q9I|A Chain A, The A251c:s430c Double Mutant Of Flavocytochrome C3 From Shewanella Frigidimarina Length = 571 Back     alignment and structure
>pdb|1E39|A Chain A, Flavocytochrome C3 From Shewanella Frigidimarina Histidine 365 Mutated To Alanine Length = 571 Back     alignment and structure
>pdb|1M64|A Chain A, Crystal Structure Of Q363f Mutant Flavocytochrome C3 Length = 571 Back     alignment and structure
>pdb|1D4C|A Chain A, Crystal Structure Of The Uncomplexed Form Of The Flavocytochrome C Fumarate Reductase Of Shewanella Putrefaciens Strain Mr-1 Length = 572 Back     alignment and structure
>pdb|1LJ1|A Chain A, Crystal Structure Of Q363fR402A MUTANT FLAVOCYTOCHROME C3 Length = 571 Back     alignment and structure
>pdb|1D4D|A Chain A, Crystal Structure Of The Succinate Complexed Form Of The Flavocytochrome C Fumarate Reductase Of Shewanella Putrefaciens Strain Mr-1 Length = 572 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query641
1chu_A540 Protein (L-aspartate oxidase); flavoenzyme, NAD bi 0.0
2e5v_A472 L-aspartate oxidase; archaea, oxidoreductase; HET: 0.0
1kf6_A602 Fumarate reductase flavoprotein; respiration, fuma 1e-167
2bs2_A660 Quinol-fumarate reductase flavoprotein subunit A; 1e-163
2wdq_A588 Succinate dehydrogenase flavoprotein subunit; succ 1e-159
2h88_A621 Succinate dehydrogenase flavoprotein subunit; comp 1e-156
1jnr_A643 Adenylylsulfate reductase; oxidoreductase; HET: FA 4e-95
3gyx_A662 Adenylylsulfate reductase; oxidoreductase; HET: FA 3e-83
1y0p_A571 Fumarate reductase flavoprotein subunit; flavocyto 8e-83
1d4d_A572 Flavocytochrome C fumarate reductase; oxidoreducta 5e-80
1qo8_A566 Flavocytochrome C3 fumarate reductase; oxidoreduct 6e-65
4at0_A510 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidore 2e-37
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 6e-06
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A* Length = 540 Back     alignment and structure
 Score =  773 bits (1998), Expect = 0.0
 Identities = 228/553 (41%), Positives = 310/553 (56%), Gaps = 30/553 (5%)

Query: 79  SVKYFDFSVIGSGVAGLCYALEVAKHGTVAVITKAEPHESNTNYAQGGVSAVLCPSDSVE 138
                D  +IGSG AGL  AL +A    V V++K    E +T YAQGG++AV   +DS++
Sbjct: 5   PEHSCDVLIIGSGAAGLSLALRLADQHQVIVLSKGPVTEGSTFYAQGGIAAVFDETDSID 64

Query: 139 SHMQDTIVAGAYLCDDETVRVVCTEGPDRIRELIAIGASFDR----GEDGNLHLAREGGH 194
           SH++DT++AGA +CD   V  V +     ++ LI  G  FD       + + HL REGGH
Sbjct: 65  SHVEDTLIAGAGICDRHAVEFVASNARSCVQWLIDQGVLFDTHIQPNGEESYHLTREGGH 124

Query: 195 SHHRIVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDGPDAV---CHGVDT 251
           SH RI+HAAD TGRE+E  L+   ++ PNI V E   A+DL+ +            G   
Sbjct: 125 SHRRILHAADATGREVETTLVSKALNHPNIRVLERTNAVDLIVSDKIGLPGTRRVVGAWV 184

Query: 252 LNVETQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFH 311
            N   + V    +K  +LA+GGA  +Y  TTNP +++GDG+AMA RA   ++N+EF QFH
Sbjct: 185 WNRNKETVETCHAKAVVLATGGASKVYQYTTNPDISSGDGIAMAWRAGCRVANLEFNQFH 244

Query: 312 PTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDERAELAPRDVVAR 371
           PTAL               +FL+TEA+RG+G  L      RFMP +DER ELAPRD+VAR
Sbjct: 245 PTALYHPQAR---------NFLLTEALRGEGAYLKRPDGTRFMPDFDERGELAPRDIVAR 295

Query: 372 SIDDQLKKRNEKYVLLDISHKPTEKILSHFPNIAAECLKYGLDITSQPIPVVPAAHYMCG 431
           +ID ++K+     + LDISHKP + I  HFP I  + L  G+D+T +P+P+VPAAHY CG
Sbjct: 296 AIDHEMKRLGADCMFLDISHKPADFIRQHFPMIYEKLLGLGIDLTQEPVPIVPAAHYTCG 355

Query: 432 GVRAGLQGETNVRGLYVAGEVACTGLHGANRLASNSLLEALVFARRAVQPSIDHKKSTSI 491
           GV     G T+V GLY  GEV+ TGLHGANR+ASNSLLE LV+   A +           
Sbjct: 356 GVMVDDHGRTDVEGLYAIGEVSYTGLHGANRMASNSLLECLVYGWSAAEDITRRMPYAHD 415

Query: 492 DLSASNWWTRTVVPKSLGCNVMHNILRRTKEVRKELQSIMWRYVGIVRSTTSLQTAEWRI 551
             +   W    V        + HN          EL+  MW YVGIVR+T  L+ A  RI
Sbjct: 416 ISTLPPWDESRVENPDERVVIQHN--------WHELRLFMWDYVGIVRTTKRLERALRRI 467

Query: 552 DELEAEWETYLFEHGWEQTFVGLEACEMRNLFCCAKLVVSSALARHESRGLHYMVDFPHV 611
             L+ E + Y     +    V     E+RNL   A+L+V  A+ R ESRGLH+ +D+P +
Sbjct: 468 TMLQQEIDEY-----YAHFRVSNNLLELRNLVQVAELIVRCAMMRKESRGLHFTLDYPEL 522

Query: 612 EENKRLPTIILPS 624
             +   P+I+ P 
Sbjct: 523 LTHSG-PSILSPG 534


>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii} Length = 472 Back     alignment and structure
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A* Length = 602 Back     alignment and structure
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A* Length = 660 Back     alignment and structure
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A* Length = 588 Back     alignment and structure
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ... Length = 621 Back     alignment and structure
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A* Length = 643 Back     alignment and structure
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas} Length = 662 Back     alignment and structure
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A* Length = 571 Back     alignment and structure
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A* Length = 572 Back     alignment and structure
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 Length = 566 Back     alignment and structure
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A* Length = 510 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 641
d1chua2305 c.3.1.4 (A:2-237,A:354-422) L-aspartate oxidase {E 6e-61
d1chua2305 c.3.1.4 (A:2-237,A:354-422) L-aspartate oxidase {E 1e-13
d1neka2330 c.3.1.4 (A:1-235,A:356-450) Succinate dehydogenase 5e-58
d1neka2330 c.3.1.4 (A:1-235,A:356-450) Succinate dehydogenase 5e-12
d1kf6a2311 c.3.1.4 (A:0-225,A:358-442) Fumarate reductase {Es 8e-55
d1kf6a2311 c.3.1.4 (A:0-225,A:358-442) Fumarate reductase {Es 1e-05
d1jnra2356 c.3.1.4 (A:2-256,A:402-502) Adenylylsulfate reduct 9e-49
d2bs2a2336 c.3.1.4 (A:1-250,A:372-457) Fumarate reductase {Wo 9e-46
d2bs2a2336 c.3.1.4 (A:1-250,A:372-457) Fumarate reductase {Wo 1e-07
d1chua3116 d.168.1.1 (A:238-353) L-aspartate oxidase {Escheri 3e-37
d1neka3120 d.168.1.1 (A:236-355) Succinate dehydogenase {Esch 8e-37
d1kf6a3132 d.168.1.1 (A:226-357) Fumarate reductase {Escheric 1e-31
d1y0pa2308 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 ( 2e-29
d1y0pa2308 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 ( 1e-09
d2bs2a3121 d.168.1.1 (A:251-371) Fumarate reductase {Wolinell 1e-28
d1qo8a2317 c.3.1.4 (A:103-359,A:506-565) Flavocytochrome c3 ( 2e-23
d1qo8a2317 c.3.1.4 (A:103-359,A:506-565) Flavocytochrome c3 ( 1e-12
d1chua1111 a.7.3.1 (A:423-533) L-aspartate oxidase {Escherich 7e-23
d1d4ca2322 c.3.1.4 (A:103-359,A:506-570) Flavocytochrome c3 ( 9e-21
d1d4ca2322 c.3.1.4 (A:103-359,A:506-570) Flavocytochrome c3 ( 5e-14
d1neka1138 a.7.3.1 (A:451-588) Succinate dehydogenase {Escher 1e-17
d1d4ca3146 d.168.1.1 (A:360-505) Flavocytochrome c3 (respirat 1e-17
d1kf6a1134 a.7.3.1 (A:443-576) Fumarate reductase {Escherichi 2e-17
d2bs2a1198 a.7.3.1 (A:458-655) Fumarate reductase {Wolinella 2e-16
d1y0pa3143 d.168.1.1 (A:362-504) Flavocytochrome c3 (respirat 6e-16
d1jnra1141 a.7.3.1 (A:503-643) Adenylylsulfate reductase A su 7e-15
d1qo8a3146 d.168.1.1 (A:360-505) Flavocytochrome c3 (respirat 8e-15
d1c0pa1268 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxida 7e-08
d2gqfa1253 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein H 6e-06
d1ryia1276 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO { 2e-04
d2i0za1251 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {B 2e-04
d2gf3a1281 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bac 5e-04
>d1chua2 c.3.1.4 (A:2-237,A:354-422) L-aspartate oxidase {Escherichia coli [TaxId: 562]} Length = 305 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: L-aspartate oxidase
species: Escherichia coli [TaxId: 562]
 Score =  203 bits (517), Expect = 6e-61
 Identities = 101/301 (33%), Positives = 147/301 (48%), Gaps = 18/301 (5%)

Query: 83  FDFSVIGSGVAGLCYALEVAKHGTVAVITKAEPHESNTNYAQGGVSAVLCPSDSVESHMQ 142
            D  +IGSG AGL  AL +A    V V++K    E +T YAQGG++AV   +DS++SH++
Sbjct: 8   CDVLIIGSGAAGLSLALRLADQHQVIVLSKGPVTEGSTFYAQGGIAAVFDETDSIDSHVE 67

Query: 143 DTIVAGAYLCDDETVRVVCTEGPDRIRELIAIGASFDRGE----DGNLHLAREGGHSHHR 198
           DT++AGA +CD   V  V +     ++ LI  G  FD       + + HL REGGHSH R
Sbjct: 68  DTLIAGAGICDRHAVEFVASNARSCVQWLIDQGVLFDTHIQPNGEESYHLTREGGHSHRR 127

Query: 199 IVHAADMTGREIERALLEAVVSDPNISVFEHHFAIDLLTTLDG---PDAVCHGVDTLNVE 255
           I+HAAD TGRE+E  L+   ++ PNI V E   A+DL+ +            G    N  
Sbjct: 128 ILHAADATGREVETTLVSKALNHPNIRVLERTNAVDLIVSDKIGLPGTRRVVGAWVWNRN 187

Query: 256 TQEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFHPTAL 315
            + V    +K  +LA+GGA  +Y  TTNP +++GDG+AMA RA   ++N   V       
Sbjct: 188 KETVETCHAKAVVLATGGASKVYQYTTNPDISSGDGIAMAWRAGCRVANCGGVMVDDHGR 247

Query: 316 ADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDERAELAPRDVVARSIDD 375
            D       +       +    + G   +  N  +E  +         A  D+  R    
Sbjct: 248 TD------VEGLYAIGEVSYTGLHGANRMASNSLLECLVY-----GWSAAEDITRRMPYA 296

Query: 376 Q 376
            
Sbjct: 297 H 297


>d1chua2 c.3.1.4 (A:2-237,A:354-422) L-aspartate oxidase {Escherichia coli [TaxId: 562]} Length = 305 Back     information, alignment and structure
>d1neka2 c.3.1.4 (A:1-235,A:356-450) Succinate dehydogenase {Escherichia coli [TaxId: 562]} Length = 330 Back     information, alignment and structure
>d1neka2 c.3.1.4 (A:1-235,A:356-450) Succinate dehydogenase {Escherichia coli [TaxId: 562]} Length = 330 Back     information, alignment and structure
>d1kf6a2 c.3.1.4 (A:0-225,A:358-442) Fumarate reductase {Escherichia coli [TaxId: 562]} Length = 311 Back     information, alignment and structure
>d1kf6a2 c.3.1.4 (A:0-225,A:358-442) Fumarate reductase {Escherichia coli [TaxId: 562]} Length = 311 Back     information, alignment and structure
>d1jnra2 c.3.1.4 (A:2-256,A:402-502) Adenylylsulfate reductase A subunit {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 356 Back     information, alignment and structure
>d2bs2a2 c.3.1.4 (A:1-250,A:372-457) Fumarate reductase {Wolinella succinogenes [TaxId: 844]} Length = 336 Back     information, alignment and structure
>d2bs2a2 c.3.1.4 (A:1-250,A:372-457) Fumarate reductase {Wolinella succinogenes [TaxId: 844]} Length = 336 Back     information, alignment and structure
>d1chua3 d.168.1.1 (A:238-353) L-aspartate oxidase {Escherichia coli [TaxId: 562]} Length = 116 Back     information, alignment and structure
>d1neka3 d.168.1.1 (A:236-355) Succinate dehydogenase {Escherichia coli [TaxId: 562]} Length = 120 Back     information, alignment and structure
>d1kf6a3 d.168.1.1 (A:226-357) Fumarate reductase {Escherichia coli [TaxId: 562]} Length = 132 Back     information, alignment and structure
>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]} Length = 308 Back     information, alignment and structure
>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]} Length = 308 Back     information, alignment and structure
>d2bs2a3 d.168.1.1 (A:251-371) Fumarate reductase {Wolinella succinogenes [TaxId: 844]} Length = 121 Back     information, alignment and structure
>d1qo8a2 c.3.1.4 (A:103-359,A:506-565) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]} Length = 317 Back     information, alignment and structure
>d1qo8a2 c.3.1.4 (A:103-359,A:506-565) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]} Length = 317 Back     information, alignment and structure
>d1chua1 a.7.3.1 (A:423-533) L-aspartate oxidase {Escherichia coli [TaxId: 562]} Length = 111 Back     information, alignment and structure
>d1d4ca2 c.3.1.4 (A:103-359,A:506-570) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella putrefaciens [TaxId: 24]} Length = 322 Back     information, alignment and structure
>d1d4ca2 c.3.1.4 (A:103-359,A:506-570) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella putrefaciens [TaxId: 24]} Length = 322 Back     information, alignment and structure
>d1neka1 a.7.3.1 (A:451-588) Succinate dehydogenase {Escherichia coli [TaxId: 562]} Length = 138 Back     information, alignment and structure
>d1d4ca3 d.168.1.1 (A:360-505) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella putrefaciens [TaxId: 24]} Length = 146 Back     information, alignment and structure
>d1kf6a1 a.7.3.1 (A:443-576) Fumarate reductase {Escherichia coli [TaxId: 562]} Length = 134 Back     information, alignment and structure
>d2bs2a1 a.7.3.1 (A:458-655) Fumarate reductase {Wolinella succinogenes [TaxId: 844]} Length = 198 Back     information, alignment and structure
>d1y0pa3 d.168.1.1 (A:362-504) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]} Length = 143 Back     information, alignment and structure
>d1jnra1 a.7.3.1 (A:503-643) Adenylylsulfate reductase A subunit {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 141 Back     information, alignment and structure
>d1qo8a3 d.168.1.1 (A:360-505) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]} Length = 146 Back     information, alignment and structure
>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]} Length = 268 Back     information, alignment and structure
>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]} Length = 253 Back     information, alignment and structure
>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} Length = 276 Back     information, alignment and structure
>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]} Length = 251 Back     information, alignment and structure
>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]} Length = 281 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query641
d1qo8a2317 Flavocytochrome c3 (respiratory fumarate reductase 100.0
d1neka2330 Succinate dehydogenase {Escherichia coli [TaxId: 5 100.0
d1kf6a2311 Fumarate reductase {Escherichia coli [TaxId: 562]} 100.0
d1y0pa2308 Flavocytochrome c3 (respiratory fumarate reductase 100.0
d1d4ca2322 Flavocytochrome c3 (respiratory fumarate reductase 100.0
d2bs2a2336 Fumarate reductase {Wolinella succinogenes [TaxId: 100.0
d1chua2305 L-aspartate oxidase {Escherichia coli [TaxId: 562] 100.0
d1jnra2356 Adenylylsulfate reductase A subunit {Archaeon Arch 100.0
d2bs2a1198 Fumarate reductase {Wolinella succinogenes [TaxId: 99.94
d1neka1138 Succinate dehydogenase {Escherichia coli [TaxId: 5 99.94
d1jnra1141 Adenylylsulfate reductase A subunit {Archaeon Arch 99.93
d1kf6a1134 Fumarate reductase {Escherichia coli [TaxId: 562]} 99.93
d2gqfa1253 Hypothetical protein HI0933 {Haemophilus influenza 99.92
d2i0za1251 Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396] 99.91
d1chua1111 L-aspartate oxidase {Escherichia coli [TaxId: 562] 99.87
d1chua3116 L-aspartate oxidase {Escherichia coli [TaxId: 562] 99.86
d1kf6a3132 Fumarate reductase {Escherichia coli [TaxId: 562]} 99.81
d2bs2a3121 Fumarate reductase {Wolinella succinogenes [TaxId: 99.81
d1neka3120 Succinate dehydogenase {Escherichia coli [TaxId: 5 99.78
d1h6va1235 Mammalian thioredoxin reductase {Rat (Rattus norve 99.73
d1ryia1276 Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} 99.64
d1dxla1221 Dihydrolipoamide dehydrogenase {Garden pea (Pisum 99.63
d1feca1240 Trypanothione reductase {Crithidia fasciculata [Ta 99.61
d1pj5a2305 N,N-dimethylglycine oxidase {Arthrobacter globifor 99.59
d1mo9a1261 NADH-dependent 2-ketopropyl coenzyme M oxidoreduct 99.59
d1ebda1223 Dihydrolipoamide dehydrogenase {Bacillus stearothe 99.57
d1xdia1233 Dihydrolipoamide dehydrogenase {Mycobacterium tube 99.56
d3grsa1221 Glutathione reductase {Human (Homo sapiens) [TaxId 99.56
d2gf3a1281 Sarcosine oxidase {Bacillus sp., strain b0618 [Tax 99.55
d3lada1229 Dihydrolipoamide dehydrogenase {Azotobacter vinela 99.55
d1ojta1229 Dihydrolipoamide dehydrogenase {Neisseria meningit 99.53
d1aoga1238 Trypanothione reductase {Trypanosoma cruzi [TaxId: 99.47
d1lvla1220 Dihydrolipoamide dehydrogenase {Pseudomonas putida 99.46
d2cula1230 GidA-related protein TTHA1897 {Thermus thermophilu 99.43
d1cf3a1385 Glucose oxidase {Aspergillus niger [TaxId: 5061]} 99.42
d1v59a1233 Dihydrolipoamide dehydrogenase {Baker's yeast (Sac 99.37
d1gpea1391 Glucose oxidase {Penicillium amagasakiense [TaxId: 99.33
d1d5ta1336 Guanine nucleotide dissociation inhibitor, GDI {Co 99.32
d3coxa1370 Cholesterol oxidase of GMC family {Brevibacterium 99.31
d1n4wa1367 Cholesterol oxidase of GMC family {Streptomyces sp 99.3
d1vdca1192 Thioredoxin reductase {Mouse-ear cress (Arabidopsi 99.28
d2bcgg1297 Guanine nucleotide dissociation inhibitor, GDI {Ba 99.25
d1rp0a1278 Thiazole biosynthetic enzyme Thi4 {Thale cress(Ara 99.21
d1onfa1259 Glutathione reductase {Plasmodium falciparum [TaxI 99.2
d2ivda1347 Protoporphyrinogen oxidase {Myxococcus xanthus [Ta 99.2
d2f5va1379 Pyranose 2-oxidase {White-rot fungus (Peniophora s 99.19
d1kdga1360 Flavoprotein domain of flavocytochrome cellobiose 99.18
d2gjca1311 Thiazole biosynthetic enzyme Thi4 {Baker's yeast ( 99.15
d2v5za1383 Monoamine oxidase B {Human (Homo sapiens) [TaxId: 99.09
d2gmha1380 Electron transfer flavoprotein-ubiquinone oxidored 99.09
d1w4xa1298 Phenylacetone monooxygenase {Thermobifida fusca [T 99.08
d2iida1370 L-aminoacid oxidase {Malayan pit viper (Calloselas 99.06
d1k0ia1292 p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a 99.06
d1nhpa1198 NADH peroxidase {Enterococcus faecalis [TaxId: 135 99.03
d1ju2a1351 Hydroxynitrile lyase {Almond (Prunus dulcis) [TaxI 99.0
d2gv8a1335 Flavin-dependent monoxygenase SPBP16F5.08c {Schizo 98.96
d2voua1265 Dihydroxypyridine hydroxylase DhpH {Arthrobacter n 98.89
d3c96a1288 Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 98.85
d1trba1190 Thioredoxin reductase {Escherichia coli [TaxId: 56 98.71
d1i8ta1298 UDP-galactopyranose mutase, N-terminal domain {Esc 98.56
d1c0pa1268 D-aminoacid oxidase, N-terminal domain {Rhodotorul 98.53
d2dw4a2449 Lysine-specific histone demethylase 1, LSD1 {Human 98.52
d1gesa1217 Glutathione reductase {Escherichia coli [TaxId: 56 98.51
d1b5qa1347 Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]} 98.43
d1v59a2122 Dihydrolipoamide dehydrogenase {Baker's yeast (Sac 98.43
d1q1ra2133 Putidaredoxin reductase {Pseudomonas putida [TaxId 98.41
d1mo9a2121 NADH-dependent 2-ketopropyl coenzyme M oxidoreduct 98.41
d1gesa2116 Glutathione reductase {Escherichia coli [TaxId: 56 98.4
d3lada2119 Dihydrolipoamide dehydrogenase {Azotobacter vinela 98.4
d1seza1373 Protoporphyrinogen oxidase {Tobacco (Nicotiana tab 98.37
d1h6va2122 Mammalian thioredoxin reductase {Rat (Rattus norve 98.32
d1qo8a3146 Flavocytochrome c3 (respiratory fumarate reductase 98.32
d1ps9a3179 2,4-dienoyl-CoA reductase, middle domain {Escheric 98.31
d1ebda2117 Dihydrolipoamide dehydrogenase {Bacillus stearothe 98.28
d2bi7a1314 UDP-galactopyranose mutase, N-terminal domain {Kle 98.27
d1pn0a1360 Phenol hydroxylase {Soil-living yeast (Trichosporo 98.25
d1fl2a1184 Alkyl hydroperoxide reductase subunit F (AhpF), C- 98.25
d1lvla2115 Dihydrolipoamide dehydrogenase {Pseudomonas putida 98.2
d1d4ca3146 Flavocytochrome c3 (respiratory fumarate reductase 98.18
d3grsa2125 Glutathione reductase {Human (Homo sapiens) [TaxId 98.16
d1djqa3233 Trimethylamine dehydrogenase, middle domain {Methy 98.13
d1fl2a2126 Alkyl hydroperoxide reductase subunit F (AhpF), C- 98.1
d1feca2117 Trypanothione reductase {Crithidia fasciculata [Ta 98.08
d1d7ya2121 NADH-dependent ferredoxin reductase, BphA4 {Pseudo 98.07
d1ojta2125 Dihydrolipoamide dehydrogenase {Neisseria meningit 98.07
d1dxla2123 Dihydrolipoamide dehydrogenase {Garden pea (Pisum 98.06
d1m6ia2137 Apoptosis-inducing factor (AIF) {Human (Homo sapie 98.01
d1gtea4196 Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su 97.97
d1onfa2117 Glutathione reductase {Plasmodium falciparum [TaxI 97.97
d1lqta2239 Ferredoxin:NADP reductase FprA {Mycobacterium tube 97.96
d1xhca2122 NADH oxidase /nitrite reductase {Pyrococcus furios 97.94
d1nhpa2123 NADH peroxidase {Enterococcus faecalis [TaxId: 135 97.89
d1vdca2130 Thioredoxin reductase {Mouse-ear cress (Arabidopsi 97.79
d1cjca2230 Adrenodoxin reductase of mitochondrial p450 system 97.78
d1aoga2117 Trypanothione reductase {Trypanosoma cruzi [TaxId: 97.77
d1m6ia1213 Apoptosis-inducing factor (AIF) {Human (Homo sapie 97.71
d1y0pa3143 Flavocytochrome c3 (respiratory fumarate reductase 97.69
d1trba2126 Thioredoxin reductase {Escherichia coli [TaxId: 56 97.59
d1gtea3153 Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su 97.58
d1kifa1246 D-aminoacid oxidase, N-terminal domain {Pig (Sus s 97.5
d1ps9a2162 2,4-dienoyl-CoA reductase, C-terminal domain {Esch 97.15
d1d7ya1183 NADH-dependent ferredoxin reductase, BphA4 {Pseudo 97.15
d1jnra3145 Adenylylsulfate reductase A subunit {Archaeon Arch 96.9
d1q1ra1185 Putidaredoxin reductase {Pseudomonas putida [TaxId 96.61
d1trba1190 Thioredoxin reductase {Escherichia coli [TaxId: 56 96.46
d1djqa2156 Trimethylamine dehydrogenase, C-terminal domain {M 96.46
d1fl2a1184 Alkyl hydroperoxide reductase subunit F (AhpF), C- 96.23
d1vg0a1491 Rab escort protein 1 {Rat (Rattus norvegicus) [Tax 96.22
d1fcda1186 Flavocytochrome c sulfide dehydrogenase, FCSD, fla 96.19
d1seza1373 Protoporphyrinogen oxidase {Tobacco (Nicotiana tab 96.15
d1q1ra1185 Putidaredoxin reductase {Pseudomonas putida [TaxId 96.12
d1m6ia1213 Apoptosis-inducing factor (AIF) {Human (Homo sapie 95.71
d1d7ya1183 NADH-dependent ferredoxin reductase, BphA4 {Pseudo 95.45
d1cjca1225 Adrenodoxin reductase of mitochondrial p450 system 95.34
d1xhca1167 NADH oxidase /nitrite reductase {Pyrococcus furios 95.2
d1l7da1183 Nicotinamide nucleotide transhydrogenase dI compon 95.13
d1xhca1167 NADH oxidase /nitrite reductase {Pyrococcus furios 95.08
d1pjca1168 L-alanine dehydrogenase {Phormidium lapideum [TaxI 94.98
d2jfga193 UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase 93.86
d1e5qa1182 Saccharopine reductase {Rice blast fungus (Magnapo 93.44
d1bg6a2184 N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A 92.55
d2dw4a2449 Lysine-specific histone demethylase 1, LSD1 {Human 91.58
d1kyqa1150 Bifunctional dehydrogenase/ferrochelatase Met8p, N 90.55
d1lssa_132 Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax 90.53
d1nyta1170 Shikimate 5-dehydrogenase AroE {Escherichia coli [ 89.82
d1wdka3186 Fatty oxidation complex alpha subunit, middle doma 89.3
d1ks9a2167 Ketopantoate reductase PanE {Escherichia coli [Tax 89.02
d1f0ya2192 Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum 88.99
d2hmva1134 Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} 88.8
d1pjqa1113 Siroheme synthase CysG, domain 1 {Salmonella typhi 88.75
d2gv8a2107 Flavin-dependent monoxygenase SPBP16F5.08c {Schizo 88.29
d1jw9b_247 Molybdenum cofactor biosynthesis protein MoeB {Esc 87.84
d1e3ja2170 Ketose reductase (sorbitol dehydrogenase) {Silverl 87.41
d1pl8a2171 Ketose reductase (sorbitol dehydrogenase) {Human ( 87.38
d1npya1167 Shikimate 5-dehydrogenase-like protein HI0607 {Hae 87.16
d1piwa2168 Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas 87.1
d1mv8a2202 GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos 86.6
d1n1ea2189 Glycerol-3- phosphate dehydrogenase {Trypanosome ( 86.31
d1kola2195 Formaldehyde dehydrogenase {Pseudomonas putida [Ta 86.31
d1llua2166 Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax 85.51
d1pzga1154 Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5 85.5
d1vi2a1182 Putative shikimate dehydrogenase YdiB {Escherichia 85.21
d1vj0a2182 Hypothetical protein TM0436 {Thermotoga maritima [ 84.42
d1jqba2174 Bacterial secondary alcohol dehydrogenase {Clostri 83.95
d1uufa2168 Hypothetical protein YahK {Escherichia coli [TaxId 83.72
d1txga2180 Glycerol-3- phosphate dehydrogenase {Archaeoglobus 83.51
d1d1ta2176 Alcohol dehydrogenase {Human (Homo sapiens), diffe 83.4
d1cdoa2175 Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI 82.43
d1e3ia2174 Alcohol dehydrogenase {Mouse (Mus musculus), class 82.36
d1yovb1426 UBA3 {Human (Homo sapiens) [TaxId: 9606]} 81.44
d1p77a1171 Shikimate 5-dehydrogenase AroE {Haemophilus influe 81.38
d2jhfa2176 Alcohol dehydrogenase {Horse (Equus caballus) [Tax 80.98
d1ez4a1146 Lactate dehydrogenase {Lactobacillus pentosus [Tax 80.87
d1djqa3233 Trimethylamine dehydrogenase, middle domain {Methy 80.84
d1p0fa2174 Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 80.31
>d1qo8a2 c.3.1.4 (A:103-359,A:506-565) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]
Probab=100.00  E-value=0  Score=342.68  Aligned_cols=280  Identities=28%  Similarity=0.399  Sum_probs=236.4

Q ss_pred             CCCCCCCEEEECCCHHHHHHHHHHHHCC-CEEEEEECCCCCCCCCCCCCCEEECC-------CCCCCHHHHHHHHHHHCC
Q ss_conf             9632126899996079999999988669-86999715899995101358602104-------997889999999999565
Q 006532           78 GSVKYFDFSVIGSGVAGLCYALEVAKHG-TVAVITKAEPHESNTNYAQGGVSAVL-------CPSDSVESHMQDTIVAGA  149 (641)
Q Consensus        78 ~~~~~~DVlVIGgG~AGl~AA~~aa~~G-~V~iiek~~~~~g~s~~~~ggi~~~~-------~~~d~~~~~~~~~~~~g~  149 (641)
                      .+..++||||||+|+|||+||+.|++.| +|+||||....+|+|.++.|+++...       ...|+++.++.+++..+.
T Consensus        15 ~~~e~~DVvVIGaG~aGl~AA~~aa~~G~~V~vlEK~~~~gG~S~~a~Ggi~a~~~~~~~~~g~~d~~~~~~~d~~~~~~   94 (317)
T d1qo8a2          15 GPSETTQVLVVGAGSAGFNASLAAKKAGANVILVDKAPFSGGNSMISAGGMNAVGTKQQTAHGVEDKVEWFIEDAMKGGR   94 (317)
T ss_dssp             CCSEEEEEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTT
T ss_pred             CCCCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHC
T ss_conf             99870588998968999999999997799389996778899843530899632353455523557757788999987404


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEE--CCCCCHHHHHHHHHHHHHCCCCCEEE
Q ss_conf             7889999999997829999999985992035899973223579820131443--16872799999999999819994898
Q 006532          150 YLCDDETVRVVCTEGPDRIRELIAIGASFDRGEDGNLHLAREGGHSHHRIVH--AADMTGREIERALLEAVVSDPNISVF  227 (641)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~i~~l~~~Gv~~~~~~~g~~~~~~~~g~~~~r~~~--~~~~~g~~~~~~l~~~~~~~~gv~i~  227 (641)
                      +.+++++++.+++++++.++|+.++|++|...       ...+++..+|...  ..+.++..+...|.+.+++ .|++++
T Consensus        95 ~~~d~~lv~~~~~~a~~~i~~l~~~Gv~~~~~-------~~~gg~~~~r~~~~~~g~~~g~~i~~~L~~~~~~-~g~~i~  166 (317)
T d1qo8a2          95 QQNDIKLVTILAEQSADGVQWLESLGANLDDL-------KRSGGARVDRTHRPHGGKSSGPEIIDTLRKAAKE-QGIDTR  166 (317)
T ss_dssp             TCSCHHHHHHHHHHHHHHHHHHHHTTCCCCEE-------ECCTTCSSCCEEECSSSSCHHHHHHHHHHHHHHH-TTCCEE
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC-------CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH-CCCEEE
T ss_conf             65206677888766555423577764201213-------3346765564333223332204666999998652-141343


Q ss_pred             CCEEEEEEEECCCCCCCEEEEEEEEECCCCEEEEEECCEEEECCCCCCCCC------------CCCCCCCCCCCCHHHHH
Q ss_conf             542788877448999755999999965899499998277999699778679------------89977666733216888
Q 006532          228 EHHFAIDLLTTLDGPDAVCHGVDTLNVETQEVVRFISKVTLLASGGAGHIY------------PSTTNPLVATGDGMAMA  295 (641)
Q Consensus       228 ~~~~v~~l~~~~~g~~~~v~Gv~~~~~~~g~~~~i~Ak~VVlAtGg~~~~~------------~~~~~~~~~~G~g~~~a  295 (641)
                      .++.+++|+.++++   +|.||++.+. ++..+.|.||.||||||||+..+            ..+.+++.++|||+.|+
T Consensus       167 ~~~~v~~l~~~~~g---~V~Gv~~~~~-~~~~~~i~Ak~VVlAtGG~~~n~~~~~~~~p~~~~~~~~~~~~~tGdGi~ma  242 (317)
T d1qo8a2         167 LNSRVVKLVVNDDH---SVVGAVVHGK-HTGYYMIGAKSVVLATGGYGMNKEMIAYYRPTMKDMTSSNNITATGDGVLMA  242 (317)
T ss_dssp             CSEEEEEEEECTTS---BEEEEEEEET-TTEEEEEEEEEEEECCCCCTTCHHHHHHHCGGGTTCEECSCTTCSCHHHHHH
T ss_pred             ECCCHHHEEECCCC---CCEEEEEECC-CCEEEEEECCCEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH
T ss_conf             20210210100213---3112476325-4058997236238831433337999998640255554458999484999999


Q ss_pred             HHCCCEEECCCCCCCCCEEECCCCCCCCCCCCCCCCCEEECCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf             86599560533322342000389998898777776312420211799689819988554445322224863589999999
Q 006532          296 HRAQAVISNMEFVQFHPTALADEGLPIKPKKTRENSFLITEAVRGDGGILYNLGMERFMPLYDERAELAPRDVVARSIDD  375 (641)
Q Consensus       296 ~~aGa~l~~~e~~~~~p~~~~~~g~~~~p~~~~~~~~~~~~~~~~~g~~~vn~~g~rf~~~~~~~~~~~~~~~~~~~~~~  375 (641)
                      +++|+.+.||||+|++|...                           ..                               
T Consensus       243 ~~~Ga~l~~me~vq~~~~~~---------------------------~~-------------------------------  264 (317)
T d1qo8a2         243 KEIGASMTDIDWVQAAINTT---------------------------AS-------------------------------  264 (317)
T ss_dssp             HHTTBCEESTTCEEECBCTT---------------------------CE-------------------------------
T ss_pred             HHCCCEECCCCCEEECCCCC---------------------------CE-------------------------------
T ss_conf             98698245872421036874---------------------------07-------------------------------


Q ss_pred             HHHHCCCCEEEEECCCCCHHHHHHHCHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCEEECCCCCCCCCCEEECCCCCCC
Q ss_conf             99936997599917899965899458109999998199999997447420021147348689997326870232544677
Q 006532          376 QLKKRNEKYVLLDISHKPTEKILSHFPNIAAECLKYGLDITSQPIPVVPAAHYMCGGVRAGLQGETNVRGLYVAGEVACT  455 (641)
Q Consensus       376 ~~~~~~~~~v~ld~~~~~~~~~~~~~~~~~~~~~~~G~d~~~~~i~v~p~~~~~~GGi~vD~~~~T~ipGLyAaGe~~~g  455 (641)
                                .+|..                                                 .++||||||||||+ +
T Consensus       265 ----------~~d~~-------------------------------------------------~~~i~gl~aaGe~~-~  284 (317)
T d1qo8a2         265 ----------VLDLQ-------------------------------------------------SKPIDGLFAAGEVT-G  284 (317)
T ss_dssp             ----------EEBTT-------------------------------------------------SCEEEEEEECSTTB-C
T ss_pred             ----------EECCC-------------------------------------------------CCEECCEEEHHHHC-C
T ss_conf             ----------86799-------------------------------------------------99879876503340-6


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             88899820323168999999999899898531
Q 006532          456 GLHGANRLASNSLLEALVFARRAVQPSIDHKK  487 (641)
Q Consensus       456 g~~Ga~rl~g~~l~~a~v~G~~Ag~~aa~~~~  487 (641)
                      |+||+|||+||++.+++|||++||++|++|++
T Consensus       285 g~hG~nrlggnsl~~~~vfg~~ag~~aa~~~~  316 (317)
T d1qo8a2         285 GVHGYNRLGGNAIADTVVFGRIAGDNAAKHAL  316 (317)
T ss_dssp             SSSTTCCCTTHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf             77787766310377878879999999999860



>d1neka2 c.3.1.4 (A:1-235,A:356-450) Succinate dehydogenase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1kf6a2 c.3.1.4 (A:0-225,A:358-442) Fumarate reductase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]} Back     information, alignment and structure
>d1d4ca2 c.3.1.4 (A:103-359,A:506-570) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella putrefaciens [TaxId: 24]} Back     information, alignment and structure
>d2bs2a2 c.3.1.4 (A:1-250,A:372-457) Fumarate reductase {Wolinella succinogenes [TaxId: 844]} Back     information, alignment and structure
>d1chua2 c.3.1.4 (A:2-237,A:354-422) L-aspartate oxidase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1jnra2 c.3.1.4 (A:2-256,A:402-502) Adenylylsulfate reductase A subunit {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d2bs2a1 a.7.3.1 (A:458-655) Fumarate reductase {Wolinella succinogenes [TaxId: 844]} Back     information, alignment and structure
>d1neka1 a.7.3.1 (A:451-588) Succinate dehydogenase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1jnra1 a.7.3.1 (A:503-643) Adenylylsulfate reductase A subunit {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d1kf6a1 a.7.3.1 (A:443-576) Fumarate reductase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure
>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]} Back     information, alignment and structure
>d1chua1 a.7.3.1 (A:423-533) L-aspartate oxidase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1chua3 d.168.1.1 (A:238-353) L-aspartate oxidase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1kf6a3 d.168.1.1 (A:226-357) Fumarate reductase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2bs2a3 d.168.1.1 (A:251-371) Fumarate reductase {Wolinella succinogenes [TaxId: 844]} Back     information, alignment and structure
>d1neka3 d.168.1.1 (A:236-355) Succinate dehydogenase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1h6va1 c.3.1.5 (A:10-170,A:293-366) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} Back     information, alignment and structure
>d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]} Back     information, alignment and structure
>d1feca1 c.3.1.5 (A:1-169,A:287-357) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]} Back     information, alignment and structure
>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]} Back     information, alignment and structure
>d1mo9a1 c.3.1.5 (A:2-192,A:314-383) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]} Back     information, alignment and structure
>d1ebda1 c.3.1.5 (A:7-154,A:272-346) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1xdia1 c.3.1.5 (A:2-161,A:276-348) Dihydrolipoamide dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d3grsa1 c.3.1.5 (A:18-165,A:291-363) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]} Back     information, alignment and structure
>d3lada1 c.3.1.5 (A:1-158,A:278-348) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]} Back     information, alignment and structure
>d1ojta1 c.3.1.5 (A:117-275,A:401-470) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]} Back     information, alignment and structure
>d1aoga1 c.3.1.5 (A:3-169,A:287-357) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]} Back     information, alignment and structure
>d1lvla1 c.3.1.5 (A:1-150,A:266-335) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d2cula1 c.3.1.7 (A:2-231) GidA-related protein TTHA1897 {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1cf3a1 c.3.1.2 (A:3-324,A:521-583) Glucose oxidase {Aspergillus niger [TaxId: 5061]} Back     information, alignment and structure
>d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1gpea1 c.3.1.2 (A:1-328,A:525-587) Glucose oxidase {Penicillium amagasakiense [TaxId: 63559]} Back     information, alignment and structure
>d3coxa1 c.3.1.2 (A:5-318,A:451-506) Cholesterol oxidase of GMC family {Brevibacterium sterolicum [TaxId: 1702]} Back     information, alignment and structure
>d1n4wa1 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of GMC family {Streptomyces sp. [TaxId: 1931]} Back     information, alignment and structure
>d1vdca1 c.3.1.5 (A:1-117,A:244-316) Thioredoxin reductase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1rp0a1 c.3.1.6 (A:7-284) Thiazole biosynthetic enzyme Thi4 {Thale cress(Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1onfa1 c.3.1.5 (A:1-153,A:271-376) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]} Back     information, alignment and structure
>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]} Back     information, alignment and structure
>d2f5va1 c.3.1.2 (A:43-354,A:553-619) Pyranose 2-oxidase {White-rot fungus (Peniophora sp. SG) [TaxId: 204723]} Back     information, alignment and structure
>d1kdga1 c.3.1.2 (A:215-512,A:694-755) Flavoprotein domain of flavocytochrome cellobiose dehydrogenase (CDH), FAD-binding domain {Fungus (Phanerochaete chrysosporium) [TaxId: 5306]} Back     information, alignment and structure
>d2gjca1 c.3.1.6 (A:16-326) Thiazole biosynthetic enzyme Thi4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2gmha1 c.3.1.2 (A:4-236,A:336-482) Electron transfer flavoprotein-ubiquinone oxidoreductase, EFT-QO {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]} Back     information, alignment and structure
>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]} Back     information, alignment and structure
>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]} Back     information, alignment and structure
>d1ju2a1 c.3.1.2 (A:1-293,A:464-521) Hydroxynitrile lyase {Almond (Prunus dulcis) [TaxId: 3755]} Back     information, alignment and structure
>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]} Back     information, alignment and structure
>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]} Back     information, alignment and structure
>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]} Back     information, alignment and structure
>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]} Back     information, alignment and structure
>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]} Back     information, alignment and structure
>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]} Back     information, alignment and structure
>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]} Back     information, alignment and structure
>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1qo8a3 d.168.1.1 (A:360-505) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]} Back     information, alignment and structure
>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]} Back     information, alignment and structure
>d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]} Back     information, alignment and structure
>d1fl2a1 c.3.1.5 (A:212-325,A:452-521) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1d4ca3 d.168.1.1 (A:360-505) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella putrefaciens [TaxId: 24]} Back     information, alignment and structure
>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} Back     information, alignment and structure
>d1fl2a2 c.3.1.5 (A:326-451) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]} Back     information, alignment and structure
>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]} Back     information, alignment and structure
>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]} Back     information, alignment and structure
>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]} Back     information, alignment and structure
>d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]} Back     information, alignment and structure
>d1lqta2 c.4.1.1 (A:2-108,A:325-456) Ferredoxin:NADP reductase FprA {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]} Back     information, alignment and structure
>d1vdca2 c.3.1.5 (A:118-243) Thioredoxin reductase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1cjca2 c.4.1.1 (A:6-106,A:332-460) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]} Back     information, alignment and structure
>d1m6ia1 c.3.1.5 (A:128-263,A:401-477) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1y0pa3 d.168.1.1 (A:362-504) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]} Back     information, alignment and structure
>d1trba2 c.3.1.5 (A:119-244) Thioredoxin reductase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d1ps9a2 c.3.1.1 (A:466-627) 2,4-dienoyl-CoA reductase, C-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1d7ya1 c.3.1.5 (A:5-115,A:237-308) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]} Back     information, alignment and structure
>d1jnra3 d.168.1.1 (A:257-401) Adenylylsulfate reductase A subunit {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} Back     information, alignment and structure
>d1fl2a1 c.3.1.5 (A:212-325,A:452-521) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1vg0a1 c.3.1.3 (A:3-444,A:558-606) Rab escort protein 1 {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]} Back     information, alignment and structure
>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]} Back     information, alignment and structure
>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1m6ia1 c.3.1.5 (A:128-263,A:401-477) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1d7ya1 c.3.1.5 (A:5-115,A:237-308) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]} Back     information, alignment and structure
>d1cjca1 c.3.1.1 (A:107-331) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1xhca1 c.3.1.5 (A:1-103,A:226-289) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]} Back     information, alignment and structure
>d1xhca1 c.3.1.5 (A:1-103,A:226-289) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]} Back     information, alignment and structure
>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Back     information, alignment and structure
>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]} Back     information, alignment and structure
>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]} Back     information, alignment and structure
>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]} Back     information, alignment and structure
>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} Back     information, alignment and structure
>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure
>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]} Back     information, alignment and structure
>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]} Back     information, alignment and structure
>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} Back     information, alignment and structure
>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Back     information, alignment and structure
>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} Back     information, alignment and structure
>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} Back     information, alignment and structure
>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure
>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} Back     information, alignment and structure
>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]} Back     information, alignment and structure
>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} Back     information, alignment and structure
>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} Back     information, alignment and structure