Citrus Sinensis ID: 015967

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------
Protein Sequence
MEQQHSGCRDAEAVLNLQQNSSISIAYHPLFGPNDDLILLELDEKLLSDVLYQRVSLRGQPDEDAVLCTQSKTFAIKFVGTSNSVFLIPPSDHSSFCEIADDCSGKNRNQQSIASVIKVAPGNMELVEVAPRIDKLKLLLSENPYSSEEALEFEDLEEMEKSKAGLYTWNDLVDKVQASDDELRSGLWALSAVELGGYWRIVDERYMGTVLAMLLHNSVLNDWSLDALIEDEVVNVLVSDGFPPILASHCLRVYGSKVDENRSKSCLWKLDEKRVCVHFAREILSSGRRKMESFMEEWQRKIPEGMQASFEILEGEVLTERLGVDLWIRAFSVSSLPANPAERFSILFGERPKWEWKDLQPYIRDLKVPGQSLEGLLLKYTRRTQPTLDAEPVYSAR
Secondary Structure (PSIPRED)
cHHHHHHHHHHHHHHHHcccccEEEEEcccccccccEEEEEccHHHHHHHccccEEEEccccccEEEEcccccEEEEEEccccEEEEEccccccccccccccccccccccccccEEEEEEccEEEEEEccccHHHHHHHHccccccccHHHHHHHHHHHHHcccccccHHHHHHHHHccHHHHHHHHHHcccEEEccEEEEccHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHcccccHHHHHHHHHHHccccccccccccEEEEcHHHHHHHHHHHHHHcccccHHHHHHHHHHHcccccccccccccEEEEEEccccccEEEEEEcccccccHHHHHHHHHHccccccccccHHHHHccccccccHHHHHHHHHHcccccccccEEEEcc
Secondary Structure Prediction (SSPRO)
ccccEccccccEEEEcccccccEEEEEcccccccccEEEEEccHHHHHHHcccEEEEEccccccEEEEEcccEEEEEEEccccEEEEEccccccccccccccccccccccccEEEEEEEcccEEEEEcccccHHHHHHHHHcccccccccccccccccccccccccccHHHHHHHccccHHHHHHHHHHcccEEEccEEEEccHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHcccccHHHHHHHHHHHccccccccccccEEEccHHHHHHHHHHHHHHcccccHHHHHHHHHHHccccccccHHHHccEEEEcccccccEEEEEcHHHccccHHHHHHHHHHHcccccHHHHHHHHHHHccccccHHHHHHHHHHHcccccccEEEEccc
Coil and Loop (DISEMBL)
meqqhsgcrDAEAVLNLqqnssisiayhplfgpnddLILLELDEKLLSDVLYQRVslrgqpdedavlCTQSKTFAIkfvgtsnsvflippsdhssfceiaddcsgknrnQQSIASVIKVapgnmelvevaPRIDKLKLllsenpysseealefedLEEMEKSKAGLYTWNDLVDKVQASDDELRSGLWALSAVELGGYWRIVDERYMGTVLAMLLHNSVlndwsldalieDEVVNVLvsdgfppilaSHCLRvygskvdenrsksclwkldekRVCVHFAREILSSGRRKMESFMEEWQRKIPEGMQASFEILEGEVLTERLGVDLWIRAFSvsslpanpaerfsilfgerpkwewkdlqpyirdlkvpgqslEGLLLKYtrrtqptldaepvysar
Flexible Loop (DISEMBL)
meqqhsgcRDAEAVLNLQQNSSISIAYHPLFGPNDDLILLELDEKLLSDVLYQRVSLRGQPDEDAVLCTQSKTFAIKFVGTSNSVFLIPPSDHSSFCEIADDCSGKNRNQQSIASVIKVAPGNMELVEVAPRIDKLKLLLSENPYSSEEALEFEDLEEMEKSKAGLYTWNDLVDKVQASDDELRSGLWALSAVELGGYWRIVDERYMGTVLAMLLHNSVLNDWSLDALIEDEVVNVLVSDGFPPILASHCLRVYGSKVDENRSKsclwkldekrvcVHFAReilssgrrkmESFMEEWQRKIPEGMQASFEILEGEVLTERLGVDLWIRAFsvsslpanpaERFSILFGERPKWEWKDLQPYIRDLKVPGQSLEGlllkytrrtqptldaepvysar
Low Complexity Region (SEG)
MEQQHSGCRDAEAVLNLQQNSSISIAYHPLFGPNddlilleldekllsdvlYQRVSLRGQPDEDAVLCTQSKTFAIKFVGTSNSVFLIPPSDHSSFCEIADDCSGKNRNQQSIASVIKVAPGNMELVEVAPRIDKLKLLLSENPYSSeealefedleemeKSKAGLYTWNDLVDKVQASDDELRSGLWALSAVELGGYWRIVDERYMGTVLAMLLHNSVLNDWSLDALIEDEVVNVLVSDGFPPILASHCLRVYGSKVDENRSKSCLWKLDEKRVCVHFAREILSSGRRKMESFMEEWQRKIPEGMQASFEILEGEVLTERLGVDLWIRAFSVSSLPANPAERFSILFGERPKWEWKDLQPYIRDLKVPGQSLEGLLLKYTRRTQPTLDAEPVYSAR
Disordered region (IsUnstruct)
*************VLNLQQNSSISIAYHPLFGPNDDLILLELDEKLLSDVLYQRVSLRGQPDEDAVLCTQSKTFAIKFVGTSNSVFLIPPSDHSSFCEIADDC*********IASVIKVAPGNMELVEVAPRIDKLKLLL***********************AGLYTWNDLVDKVQASDDELRSGLWALSAVELGGYWRIVDERYMGTVLAMLLHNSVLNDWSLDALIEDEVVNVLVSDGFPPILASHCLRVYGSKVDENRSKSCLWKLDEKRVCVHFAREILSS*******FMEEWQRKIPEGMQASFEILEGEVLTERLGVDLWIRAFSVSSLPANPAERFSILFGERPKWEWKDLQPYIRDLKVPGQSLEGLLLKYT****************
Disordered Region (DISOPRED)
*****S*CRDAEAVLNLQQNSSISIAYHPLFGPNDDLILLELDEKLLSDVLYQRVSLRGQPDEDAVLCTQSKTFAIKFVGTSNSVFLIPPS********************SIASVIKVAPGNMELVEVAPRIDKLKLLLSENPYSSEEA******************WNDLVDKVQASDDELRSGLWALSAVELGGYWRIVDERYMGTVLAMLLHNSVLNDWSLDALIEDEVVNVLVSDGFPPILASHCLRVYGSKVDE*RSKSCLWKLDEKRVCVHFAREILSSGRRKMESFMEEWQRKIPEGMQASFEILEGEVLTERLGVDLWIRAFSVSSLPANPAERFSILFGERPKWEWKDLQPYIRDLKVPGQSLEGLLLKYTRRTQP*LDAEPVYSA*
Disordered Region (DISEMBL)
*********DAEAVLNLQQNSSISIAYHPLFGPNDDLILLELDEKLLSDVLYQRVSLRGQPDEDAVLCTQSKTFAIKFVGTSNSVFLIPPSDHSSFCEIADDCSGKNRNQQSIASVIKVAPGNMELVEVAPRIDKLKLLLSENPYSSEEALEFEDLEEMEKSKAGLYTWNDLVDKVQASDDELRSGLWALSAVELGGYWRIVDERYMGTVLAMLLHNSVLNDWSLDALIEDEVVNVLVSDGFPPILASHCLRVYGSKVDENRSKSCLWKLDEKRVCVHFAREILSSGRRKMESFMEEWQRKIPEGMQASFEILEGEVLTERLGVDLWIRAFSVSSLPANPAERFSILFGERPKWEWKDLQPYIRDLKVPGQSLEGLLLKYTRRTQPTLD********
Disordered Region (DISPRO)
******GCRDAEAVLNLQQNSSISIAYHPLFGPNDDLILLELDEKLLSDVLYQRVSLRGQPDEDAVLCTQSKTFAIKFVGTSNSVFLIPPSDHSSFCEIA*D*SGKNRNQQSIASVIKVAPGNMELVEVAPRIDKLKLLLSENPYSS*****************GLYTWNDLVDKVQASDDELRSGLWALSAVELGGYWRIVDERYMGTVLAMLLHNSVLNDWSLDALIEDEVVNVLVSDGFPPILASHCLRVYGSKVDENRSKSCLWKLDEKRVCVHFAREILSSGRRKMESFMEEWQRKIPEGMQASFEILEGEVLTERLGVDLWIRAFSVSSLPANPAERFSILFGERPKWEWKDLQPYIRDLKVPGQSLEGLLLKYTRRTQPTLDA*******
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
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TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MEQQHSGCRDAEAVLNLQQNSSISIAYHPLFGPNDDLILLELDEKLLSDVLYQRVSLRGQPDEDAVLCTQSKTFAIKFVGTSNSVFLIPPSDHSSFCEIADDCSGKNRNQQSIASVIKVAPGNMELVEVAPRIDKLKLLLSENPYSSEEALEFEDLEEMEKSKAGLYTWNDLVDKVQASDDELRSGLWALSAVELGGYWRIVDERYMGTVLAMLLHNSVLNDWSLDALIEDEVVNVLVSDGFPPILASHCLRVYGSKVDENRSKSCLWKLDEKRVCVHFAREILSSGRRKMESFMEEWQRKIPEGMQASFEILEGEVLTERLGVDLWIRAFSVSSLPANPAERFSILFGERPKWEWKDLQPYIRDLKVPGQSLEGLLLKYTRRTQPTLDAEPVYSAR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	397	2.2.26 [Sep-21-2011]
Q9BVC3	393	Sister chromatid cohesion	yes	no	0.858	0.867	0.333	8e-36
Q66I84	391	Sister chromatid cohesion	yes	no	0.896	0.910	0.313	4e-35
Q6GL75	391	Sister chromatid cohesion	yes	no	0.836	0.849	0.315	9e-34
Q14AI0	399	Sister chromatid cohesion	yes	no	0.858	0.854	0.325	1e-33
Q6GMB0	390	Sister chromatid cohesion	N/A	no	0.823	0.838	0.317	2e-31
Q55BA5	376	Probable sister chromatid	yes	no	0.793	0.837	0.261	1e-30
P25559	380	Sister chromatid cohesion	yes	no	0.911	0.952	0.226	4e-08
Q09732	357	Sister chromatid cohesion	yes	no	0.224	0.249	0.276	0.0001

>sp|Q9BVC3|DCC1_HUMAN Sister chromatid cohesion protein DCC1 OS=Homo sapiens GN=DSCC1 PE=1 SV=2

 Score =  151 bits (382), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 123/369 (33%), Positives = 188/369 (50%), Gaps = 28/369 (7%)

Query: 36  DLILLELDEKLLSDVL-YQRVSLRGQPDEDAVLCTQSKTFAIKFVGTSNSVFLIPPSDHS 94
           D  LLEL+  L   +     + +RG  DE AVLC++ KT+ +K   TSN +  IP     
Sbjct: 42  DFCLLELEPTLCQQLEDGHSLVIRGDKDEQAVLCSKDKTYDLKIADTSNMLLFIPG---- 97

Query: 95  SFCEIADDCSGKNRNQQSIASVIKVAPGNM-ELVEVAPRIDKLKLLLSENPYSSEEALEF 153
             C+  D    ++ +   I + I     N  EL    P++ KLK LL ENPY      E 
Sbjct: 98  --CKTPDQLKKEDSHCNIIHTEIFGFSNNYWELRRRRPKLKKLKKLLMENPY------EG 149

Query: 154 EDLEEMEKSKAGLYTWNDLVDKVQASDDELRSGLWALSAVELGGYWRIVDERYMGTVLAM 213
            D ++ + S +  YT  DL+D++QAS++E+ + L  L+A ++GGYWRI++  Y    + +
Sbjct: 150 PDSQKEKDSNSSKYTTEDLLDQIQASEEEIMTQLQVLNACKIGGYWRILEFDYE---MKL 206

Query: 214 LLHNSVLND---WSLDALIEDEVVNVLVSDGFPPILASHCLRVYGSK-VDENRSKSCLWK 269
           L H + L D   WS   +  +  +  L     P  +  HCL+ YG K VDE       ++
Sbjct: 207 LNHVTQLVDSESWSFGKVPLNTCLQEL-GPLEPEEMIEHCLKCYGKKYVDEGE---VYFE 262

Query: 270 LDEKRVCVHFAREILSSGRR-KMESFMEEWQRKIPEGMQASFEILEGEVLTERLGVDLWI 328
           LD  ++C   AR +L +  +  +  F E WQ+ +PEGM  S + L+G  L +R      I
Sbjct: 263 LDADKICRAAARMLLQNAVKFNLAEFQEVWQQSVPEGMVTSLDQLKGLALVDRHSRPEII 322

Query: 329 RAFSVSSLPANPAERFSILFGERPKWEWKDLQPYIRDLKVPGQSLEGLLLKYTRRTQPTL 388
               V  LP +  ERF+ LF  R KW  +D+ PYI+DL    Q++  LL KY+  +    
Sbjct: 323 FLLKVDDLPEDNQERFNSLFSLREKWTEEDIAPYIQDLCGEKQTIGALLTKYSHSSMQ-- 380

Query: 389 DAEPVYSAR 397
           +   VY++R
Sbjct: 381 NGVKVYNSR 389

Loads PCNA onto primed templates regulating velocity, spacing and restart activity of replication forks. May couple DNA replication to sister chromatid cohesion through regulation of the acetylation of the cohesin subunit SMC3.
Homo sapiens (taxid: 9606)

>sp|Q66I84|DCC1_DANRE Sister chromatid cohesion protein DCC1 OS=Danio rerio GN=dscc1 PE=2 SV=1

 Score =  149 bits (376), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 119/380 (31%), Positives = 181/380 (47%), Gaps = 24/380 (6%)

Query: 25  IAYHPLFGPN---DDLILLELDEKLLSDVLYQR-VSLRGQPDEDAVLCTQSKTFAIKFVG 80
           + Y   FG N    D  L+E+DE L   +   + + +RG  DE AVLC++ KT+ +K   
Sbjct: 24  VTYCLSFGDNVSSGDYCLMEVDENLCKHIESGKSLIIRGDKDEHAVLCSEDKTYDLKIAD 83

Query: 81  TSNSVFLIPPSDHSSFCEIADDCSGKNRNQQSIASVI-KVAPGNMELVEVAPRIDKLKLL 139
           TSN +  +P       C+  D  S    + Q + + I   +    EL    PR+ KLK L
Sbjct: 84  TSNLLLFVPG------CKTPDQLSDIPASPQLMHTQIWGFSNCYWELRRQRPRLKKLKKL 137

Query: 140 LSENPYSSEEALEFEDLEEMEKSKAGL-YTWNDLVDKVQASDDELRSGLWALSAVELGGY 198
           L ENPY             M++   GL Y+  DL++++QAS +EL + L  + A E+ G+
Sbjct: 138 LMENPYDGPPV-------GMQEEAPGLKYSMEDLLERIQASKEELEAHLGNVHACEIDGF 190

Query: 199 WRIVDERYMGTVLAMLLHNSVLNDWSLDALIEDEVVNVLVSDGFPPILASHCLRVYGSKV 258
           WRI+D  Y   +L  +        WS   +     +  L S   P  +  HCL  YG + 
Sbjct: 191 WRILDFDYEMKLLGHVTQLVDSESWSFSKVPLSVCLEELGSLE-PKAMIEHCLNCYGRR- 248

Query: 259 DENRSKSCLWKLDEKRVCVHFAREILSSGRR-KMESFMEEWQRKIPEGMQASFEILEGEV 317
             +     ++ LDE +VC   A+ +L +  +  +  F E WQ+ +PEGM    + L G  
Sbjct: 249 HSDEDNQVMYALDEDKVCRATAQLLLQNAVKFNLSEFQEVWQQSVPEGMGTRLDQLRGLA 308

Query: 318 LTERLGVDLWIRAFSVSSLPANPAERFSILFGERPKWEWKDLQPYIRDLKVPGQSLEGLL 377
           L +R      I    V  LP +  ERF+ LF  R KW   D++PYI+DL    Q+   LL
Sbjct: 309 LIDRSSKPETISLLRVEDLPEDTLERFNSLFSLREKWTQDDIEPYIQDLCGEKQTTGALL 368

Query: 378 LKYTRRTQPTLDAEPVYSAR 397
            K+ R +    +   VY++R
Sbjct: 369 TKHARSSMQ--NGIKVYNSR 386

Loads pcna onto primed templates regulating velocity, spacing and restart activity of replication forks. May couple DNA replication to sister chromatid cohesion.

Danio rerio (taxid: 7955)

>sp|Q6GL75|DCC1_XENTR Sister chromatid cohesion protein DCC1 OS=Xenopus tropicalis GN=dscc1 PE=2 SV=1

 Score =  144 bits (364), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 112/355 (31%), Positives = 168/355 (47%), Gaps = 23/355 (6%)

Query: 36  DLILLELDEKLLSDV-LYQRVSLRGQPDEDAVLCTQSKTFAIKFVGTSNSVFLIPPSDHS 94
           D  L+ELD+ L   +     + +RG   + AVLC+Q KT+ +K   TSN +  IP     
Sbjct: 39  DYSLMELDDTLCKQIEAGDSLVIRGDKSDHAVLCSQDKTYDLKIADTSNLLLFIPG---- 94

Query: 95  SFCEIADDCSGKNRNQQSIASVIKVAPGNM-ELVEVAPRIDKLKLLLSENPYSSEEALEF 153
             C+  D      +    I   I     +  EL    P++ KLK LL EN Y+  E    
Sbjct: 95  --CKTPDQLPADQQPLTIINCEIAGFSNHYWELRRCRPKLKKLKKLLMENTYNGPE---- 148

Query: 154 EDLEEMEKSKAGLYTWNDLVDKVQASDDELRSGLWALSAVELGGYWRIVDERYMGTVLAM 213
               E E     L+T  DL++ +QAS++EL   L A+ A  + G+WR++D  Y    + +
Sbjct: 149 ---NERESQDNSLHTTEDLLNMIQASNEELVDHLKAIHACSINGFWRLLDFDYE---MKL 202

Query: 214 LLHNSVLND---WSLDALIEDEVVNVLVSDGFPPILASHCLRVYGSKVDENRSKSCLWKL 270
           L H + L D   WS   +     +  L S   P  +  HCL  YG ++ +  +    + L
Sbjct: 203 LNHITQLIDSESWSFSKVPLPVCLQELRSLE-PEEMIEHCLTCYGKRLIDEGTGGDFFAL 261

Query: 271 DEKRVCVHFAREILSSGRR-KMESFMEEWQRKIPEGMQASFEILEGEVLTERLGVDLWIR 329
           DE ++C   A  +L +  +  +  F E WQ+ +PEGM    + L+G  L +R      I 
Sbjct: 262 DEDKICRATALMLLQNAVKFNLAEFQEVWQQSVPEGMNTRLDQLKGLALVDRTSRPETIF 321

Query: 330 AFSVSSLPANPAERFSILFGERPKWEWKDLQPYIRDLKVPGQSLEGLLLKYTRRT 384
                 LP +  ERF+ LFG R KW   D+ PYI+DL    Q++  LL KY R +
Sbjct: 322 LLKTEDLPEDTQERFNTLFGMREKWAEADIAPYIKDLCGEKQTIGALLTKYARSS 376

Loads pcna onto primed templates regulating velocity, spacing and restart activity of replication forks. May couple DNA replication to sister chromatid cohesion.

Xenopus tropicalis (taxid: 8364)

>sp|Q14AI0|DCC1_MOUSE Sister chromatid cohesion protein DCC1 OS=Mus musculus GN=DSCC1 PE=2 SV=1

 Score =  144 bits (363), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 120/369 (32%), Positives = 184/369 (49%), Gaps = 28/369 (7%)

Query: 36  DLILLELDEKLLSDV-LYQRVSLRGQPDEDAVLCTQSKTFAIKFVGTSNSVFLIPPSDHS 94
           D  LLEL+  L   +       +RG  DE AVLC++ KT+ +K   TSN +  IP     
Sbjct: 48  DFCLLELEPALCQQLEAGDSFVIRGDKDEQAVLCSKDKTYDLKIADTSNMLLFIPG---- 103

Query: 95  SFCEIADDCSGKNRNQQSIASVIKVAPGNM-ELVEVAPRIDKLKLLLSENPYSSEEALEF 153
             C+  D    +      + + I     N  EL    P++ KLK LL EN Y   ++ + 
Sbjct: 104 --CKTPDQLKEEETPSAIVHTEIFGFSNNYWELRRCRPKLKKLKRLLMENTYEGPDSQKE 161

Query: 154 EDLEEMEKSKAGLYTWNDLVDKVQASDDELRSGLWALSAVELGGYWRIVDERYMGTVLAM 213
           ED     +SK   YT  DL++ +QAS++E+ + L  L+A E+GGYWRI++  Y    + +
Sbjct: 162 ED---ASRSK---YTTEDLLNHIQASEEEIMAQLQVLNACEIGGYWRILEFDYE---IKL 212

Query: 214 LLHNSVLND---WSLDALIEDEVVNVLVSDGFPPILASHCLRVYGSK-VDENRSKSCLWK 269
           L H + L D   WSLD +     +  L     P  +  HCL+ YG + VD++      ++
Sbjct: 213 LNHVTQLVDSESWSLDRVPLTVCLQEL-GPLEPEEMIEHCLKCYGKRYVDKD---DVYFE 268

Query: 270 LDEKRVCVHFAREILSSGRR-KMESFMEEWQRKIPEGMQASFEILEGEVLTERLGVDLWI 328
           LD  ++C   A  +L +  +  +  F E WQ+ +PEGM    + L+G  L +R      I
Sbjct: 269 LDADKICRVTAEMLLQNAVKFNLAEFQEVWQQSVPEGMTTRLDQLKGLALVDRNSRPEII 328

Query: 329 RAFSVSSLPANPAERFSILFGERPKWEWKDLQPYIRDLKVPGQSLEGLLLKYTRRTQPTL 388
               V  LP    +RF+ LF  R KW  +D+ PYI+DL    Q++  LL KY+R +    
Sbjct: 329 FLLKVDDLPEGTQDRFNSLFSLREKWTEEDITPYIQDLCGEKQTIGALLTKYSRSSMQ-- 386

Query: 389 DAEPVYSAR 397
           +   VY++R
Sbjct: 387 NGIKVYNSR 395

Loads PCNA onto primed templates regulating velocity, spacing and restart activity of replication forks. May couple DNA replication to sister chromatid cohesion through regulation of the acetylation of the cohesin subunit SMC3.

Mus musculus (taxid: 10090)

>sp|Q6GMB0|DCC1_XENLA Sister chromatid cohesion protein DCC1 OS=Xenopus laevis GN=dscc1 PE=2 SV=1

 Score =  137 bits (345), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 114/359 (31%), Positives = 168/359 (46%), Gaps = 32/359 (8%)

Query: 36  DLILLELDEKLLSDV-LYQRVSLRGQPDEDAVLCTQSKTFAIKFVGTSNSVFLIPPSDHS 94
           D  L+ELD+ L   +     + +RG   + AVLC+Q KT+ +K   TSN +  IP     
Sbjct: 39  DYSLMELDDTLCKQIEAGDSLVIRGDKSDHAVLCSQDKTYDLKIADTSNLLLFIPG---- 94

Query: 95  SFCEIADDCSGKNRNQQSIASVIKVAPGNM-----ELVEVAPRIDKLKLLLSENPYSSEE 149
             C++ D       +QQ + SVI            EL    P++ KLK LL EN Y+  E
Sbjct: 95  --CKLPDQLPA---DQQPL-SVIHCEIAGFSNHYWELRRCRPKLKKLKKLLMENTYNGPE 148

Query: 150 ALEFEDLEEMEKSKAGLYTWNDLVDKVQASDDELRSGLWALSAVELGGYWRIVDERYMGT 209
                  E     +  LYT  DL+  +Q+S +EL   L A+ A  + G WR++D  Y   
Sbjct: 149 N------ESESSQETSLYTTEDLLSVIQSSTEELMDHLKAIHACNIKGIWRLLDFDYE-- 200

Query: 210 VLAMLLHNSVLND---WSLDALIEDEVVNVLVSDGFPPILASHCLRVYGSKVDENRSKSC 266
            + +L H + L D   WS   +     +  L S   P  +  HCL  YG ++ E      
Sbjct: 201 -MKLLNHITQLIDSESWSFSKVPLQVCLQELRSLE-PEEMIEHCLTCYGKRLMEEGGDC- 257

Query: 267 LWKLDEKRVCVHFAREILSSGRR-KMESFMEEWQRKIPEGMQASFEILEGEVLTERLGVD 325
            + LDE ++C   A  +L +  +  +  F E WQ+ +P+GM    + L+G  L +R    
Sbjct: 258 -FALDEDKICRATALMLLQNAVKFNLAEFQEVWQQSVPDGMNTRLDQLKGLALVDRTSRP 316

Query: 326 LWIRAFSVSSLPANPAERFSILFGERPKWEWKDLQPYIRDLKVPGQSLEGLLLKYTRRT 384
             I       LP +  ERF+ LFG R KW   D+ PYI+DL    Q++  LL KY R +
Sbjct: 317 ETIFLLQTEDLPEDTQERFNTLFGMREKWTEADIAPYIQDLCGEKQTIGALLTKYARSS 375

Loads pcna onto primed templates regulating velocity, spacing and restart activity of replication forks. May couple DNA replication to sister chromatid cohesion.

Xenopus laevis (taxid: 8355)

>sp|Q55BA5|DCC1_DICDI Probable sister chromatid cohesion protein DCC1 OS=Dictyostelium discoideum GN=DDB_G0271400 PE=3 SV=1

 Score =  134 bits (336), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 99/378 (26%), Positives = 190/378 (50%), Gaps = 63/378 (16%)

Query: 33  PNDDLILLELDEKLLSDVLY-QRVSLRGQPDEDAVLCTQSKTFAIKFVGTSNSVFLIPPS 91
           P+ D   LE ++++L  +   +++ ++G   ++AVLCT  KTF I+   TSNS+ L+   
Sbjct: 19  PDTDYRFLEANQEILDQIKNNKKLVIKGSLTDEAVLCTDDKTFTIRAGHTSNSMLLV--- 75

Query: 92  DHSSFCEIADDCSGKNRNQQSIASVIKVA-PGNMELVEVAPRIDKLKLLLSENPYSS--E 148
                         K+ N+      IKVA   ++EL E+ P+++ LK LL    YS   +
Sbjct: 76  -------------SKDTNK------IKVALQYHLELTEIQPKLNVLKDLL----YSKAID 112

Query: 149 EALEFEDLEEMEKSKAGLYTWNDLVDKVQASDDELRSGLWALSAVELGGYWRIVDERYMG 208
            +L+FED E +     G +++++++D++Q+S+ E++  L  L+ +     + ++ E Y  
Sbjct: 113 NSLDFEDDENL----LG-FSFDEIIDRIQSSEKEIQQYLLKLNTLIYKNRYIVLSENYEF 167

Query: 209 TVLAMLLHNSVLNDWSLDALIEDEVVNVLVSDGFPPILASHCLRVYGSK----------- 257
            +L ++L  + +  W LD +  D+ +  + +   P  +  HCL++Y  +           
Sbjct: 168 KILELILSEATIGAWKLDNIPIDKCIENIRA---PEFIIKHCLQLYSKQKSPTNSGGGGE 224

Query: 258 ------VDENRSKSCLWKLDEKRVCVHFAREILSSGRR---KMESFMEEWQRKIPEGMQA 308
                  D+N  ++ +  LD  +VC+  A+++L+   +   K E FM+ W+  +P  +Q 
Sbjct: 225 EIKGGGGDDNNDEN-ICSLDFNKVCIFRAKQLLTLSNKSNMKFEDFMDNWKDTLPIEIQP 283

Query: 309 SFEILEGEVL----TERLGVDLWIRAFSVSSLPANPAERFSILFGERPKWEWKDLQPYIR 364
           +F +L+G  +    +     +  ++  + S LP  P  RF  LF    +W   D++P+I+
Sbjct: 284 NFSMLKGIAILIPSSSTNPKEKSVKFINESILPTIPKARFKELFQISTRWSIDDIEPFIK 343

Query: 365 DLKVPGQSLEGLLLKYTR 382
               PG SLE  +L Y+R
Sbjct: 344 STIPPGNSLEQFILTYSR 361

Loads PCNA onto primed templates regulating velocity, spacing and restart activity of replication forks. May couple DNA replication to sister chromatid cohesion.

Dictyostelium discoideum (taxid: 44689)

>sp|P25559|DCC1_YEAST Sister chromatid cohesion protein DCC1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DCC1 PE=1 SV=2

 Score = 59.3 bits (142), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 89/393 (22%), Positives = 163/393 (41%), Gaps = 31/393 (7%)

Query: 22  SISIAYHPLFGPNDDLILL--ELDEKLLSDVLYQRVSLRG--QPDEDAVLCTQSKTFAIK 77
           SI++   P + P+  LI L  EL + +   V   ++  +   +   + VLC+  KT+ +K
Sbjct: 2   SINLHSAPEYDPSYKLIQLTPELLDIIQDPVQNHQLRFKSLDKDKSEVVLCSHDKTWVLK 61

Query: 78  FVGTSNSVFLIP---PSDHSSFCEIADDCSGKNRNQQSIASVIKVAPGNMELVEVAPRID 134
               SN+V L+    P    +F E      G ++    +    K         E   R  
Sbjct: 62  QRKHSNTVLLMREFVPEQPITFDETL--LFGLSKPYMDVVGFAKTES------EFETRET 113

Query: 135 KLKLLLSENPYSSEEALEFEDLEEMEKSKAGLYTWNDLVDKVQASDDELRSGLWALSAVE 194
             +L L+  P  + E L+F D      S   + T  +L++    S  E  S    +    
Sbjct: 114 HGELNLNSVPIYNGE-LDFSDKIMKRSSTKVIGTLEELLENSPCSALEGISKWHKIGGSV 172

Query: 195 LGGYWRIVDERYMGTVLAMLLHNSVLNDWSLDAL-IED--EVVNVLVSDGFPPILASHCL 251
             G   I+ + ++   L +LL +++     L  L +ED    V   + D F P       
Sbjct: 173 KDGVLCILSQDFLFKALHVLLMSAMAESLDLQHLNVEDTHHAVGKDIEDEFNPYTREIIE 232

Query: 252 RVYGS-KVDENRSKSCLWKLDEKRVC----VHFAREILSSGRRKMESFMEEWQRKIPEGM 306
            V     V E  +++  W+L    +     +   R+ +S     ++ F+ +W+   P   
Sbjct: 233 TVLNKFAVQEQEAENNTWRLRIPFIAQWYGIQALRKYVSGISMPIDEFLIKWKSLFPPFF 292

Query: 307 QASFEI--LEGEVLTERLGVDLWIRAFSVSSLPANPAERFSILFGERPKWEWKDLQPYIR 364
               +I  L G         D  ++  + S+LP +P ERF +LF  + +W+ +D++P I 
Sbjct: 293 PCDIDIDMLRGYHFKP---TDKTVQYIAKSTLPMDPKERFKVLFRLQSQWDLEDIKPLIE 349

Query: 365 DLKVPGQSLEGLLLKYTRRTQPTLDAEPVYSAR 397
           +L   G  ++  ++KY RR +  L  + V ++R
Sbjct: 350 ELNSRGMKIDSFIMKYARRKR--LGKKTVVTSR 380

Component of the RFC-like complex CTF18-RFC which is required for efficient establishment of chromosome cohesion during S-phase and may load or unload POL30/PCNA. During a clamp loading circle, the RFC:clamp complex binds to DNA and the recognition of the double-stranded/single-stranded junction stimulates ATP hydrolysis by RFC. The complex presumably provides bipartite ATP sites in which one subunit supplies a catalytic site for hydrolysis of ATP bound to the neighboring subunit. Dissociation of RFC from the clamp leaves the clamp encircling DNA.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

>sp|Q09732|DCC1_SCHPO Sister chromatid cohesion protein dcc1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=dcc1 PE=3 SV=2

 Score = 47.8 bits (112), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/94 (27%), Positives = 48/94 (51%), Gaps = 5/94 (5%)

Query: 292 ESFMEEWQRKIPEGMQA--SFEILEGEVLTERLGVDLWIRAFSVSSLPANPAERFSILFG 349
           + F++ W  ++P   +   S  +L+G    +       I+  S   LP  P+ RF  LF 
Sbjct: 252 DEFIQLWDNRLPYPCKGLPSLNLLKGYYFHDTPNT---IQYLSGDQLPREPSRRFQSLFQ 308

Query: 350 ERPKWEWKDLQPYIRDLKVPGQSLEGLLLKYTRR 383
            + KW +++L  +++DL +    +E L+LKY R+
Sbjct: 309 LKSKWLYEELWSFVKDLALSKSRVEALILKYGRK 342


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.317    0.134    0.397 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 148,627,723
Number of Sequences: 539616
Number of extensions: 6193537
Number of successful extensions: 16154
Number of sequences better than 100.0: 13
Number of HSP's better than 100.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 16118
Number of HSP's gapped (non-prelim): 15
length of query: 397
length of database: 191,569,459
effective HSP length: 120
effective length of query: 277
effective length of database: 126,815,539
effective search space: 35127904303
effective search space used: 35127904303
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)

Essential for the fidelity of chromosome transmission. Required for the DNA replication block checkpoint. Replication factor C (RFC) complex has an essential but redundant activity in sister chromatid cohesion establishment. An RFC-like complex (ctf18-RFC) is formed where ctf18 replaces rfc1 in the RFC complex along with the association of dcc1 and ctf8. This complex is required for efficient establishment of chromosome cohesion during S-phase. Acts as a PCNA loader, loading PCNA onto primed templates.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	397
225469244	397	PREDICTED: sister chromatid cohesion pro	0.997	0.997	0.751	1e-162
255571125	396	protein binding protein, putative [Ricin	0.997	1.0	0.687	1e-160
224055545	393	predicted protein [Populus trichocarpa]	0.987	0.997	0.691	1e-158
449432333	393	PREDICTED: sister chromatid cohesion pro	0.989	1.0	0.659	1e-149
356508260	396	PREDICTED: sister chromatid cohesion pro	0.979	0.982	0.672	1e-147
356517690	396	PREDICTED: sister chromatid cohesion pro	0.984	0.987	0.653	1e-147
145360995	386	sister chromatid cohesion protein DCC1 [	0.944	0.971	0.589	1e-131
297828171	388	protein binding protein [Arabidopsis lyr	0.944	0.966	0.593	1e-124
195650391	404	protein binding protein [Zea mays]	0.954	0.938	0.561	1e-118
219363363	403	protein binding protein [Zea mays] gi|19	0.977	0.962	0.551	1e-118

>gi|225469244|ref|XP_002266092.1| PREDICTED: sister chromatid cohesion protein DCC1-like [Vitis vinifera]

 Score =  577 bits (1486), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 299/398 (75%), Positives = 341/398 (85%), Gaps = 2/398 (0%)

Query: 1   MEQQHSGCRD-AEAVLNLQQNSSISIAYHPLFGPNDDLILLELDEKLLSDVLYQRVSLRG 59
           MEQ+ SGC   AEAVLNLQ NSSISI YHP FGP+DDLILLE+D+KLL DVL+QRV+LRG
Sbjct: 1   MEQKQSGCTGGAEAVLNLQPNSSISITYHPHFGPHDDLILLEIDDKLLPDVLHQRVTLRG 60

Query: 60  QPDEDAVLCTQSKTFAIKFVGTSNSVFLIPPSDHSSFCEIADDCSGKNRNQQSIASVIKV 119
           QP+EDAVLCTQSKT++IKFVG SNSVFLIPP D S+  E       K+ +Q+ +ASVIKV
Sbjct: 61  QPNEDAVLCTQSKTYSIKFVGNSNSVFLIPPVDQSALHEHPQYSDEKDDDQRVVASVIKV 120

Query: 120 APGNMELVEVAPRIDKLKLLLSENPYSSEEALEFEDLEEMEKSKAGLYTWNDLVDKVQAS 179
           APGNMELVEVAPR+DKLKLLL ENP++SEE  E E+LE ME+ K  L+ WNDL+D+VQAS
Sbjct: 121 APGNMELVEVAPRLDKLKLLLLENPFTSEEVSEKEELEGMEEQKTNLFKWNDLIDRVQAS 180

Query: 180 DDELRSGLWALSAVELGGYWRIVDERYMGTVLAMLLHNSVLNDWSLDALIEDEVVNVLVS 239
           DDELRSGL ALSAVE+ GYWRIVDE+YMGT+L MLLHNSVLNDWSLDAL EDEVV VL S
Sbjct: 181 DDELRSGLRALSAVEIDGYWRIVDEKYMGTILNMLLHNSVLNDWSLDALGEDEVVGVLES 240

Query: 240 DGFPPILASHCLRVYGSKVDENRSKSCLWKLDEKRVCVHFAREILSSGRRKMESFMEEWQ 299
           DGFP  L  HCL+VYGSKVDE    SC+WKLDE+R+C+HFAREIL  G+RKMESFMEEW 
Sbjct: 241 DGFPRTLGLHCLQVYGSKVDEGVG-SCVWKLDERRLCIHFAREILKDGKRKMESFMEEWI 299

Query: 300 RKIPEGMQASFEILEGEVLTERLGVDLWIRAFSVSSLPANPAERFSILFGERPKWEWKDL 359
           +KIP+GMQASF++LEGEVLTE+ GV+ W+RAFSVSSLP+NPA RFS+LF ERPKWEWKDL
Sbjct: 300 QKIPDGMQASFDMLEGEVLTEKFGVETWVRAFSVSSLPSNPAARFSMLFQERPKWEWKDL 359

Query: 360 QPYIRDLKVPGQSLEGLLLKYTRRTQPTLDAEPVYSAR 397
           QPYIRDL VPG S EGLLLKYTR+TQP  DAEPV+SAR
Sbjct: 360 QPYIRDLTVPGLSSEGLLLKYTRKTQPNSDAEPVFSAR 397

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255571125|ref|XP_002526513.1| protein binding protein, putative [Ricinus communis] gi|223534188|gb|EEF35904.1| protein binding protein, putative [Ricinus communis]

 Score =  569 bits (1466), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 273/397 (68%), Positives = 322/397 (81%), Gaps = 1/397 (0%)

Query: 1   MEQQHSGCRDAEAVLNLQQNSSISIAYHPLFGPNDDLILLELDEKLLSDVLYQRVSLRGQ 60
           M Q   GC  AEAVLNLQ NSS+++ YHPLFG +DDLILLELD  LL DVL+QRV+LRGQ
Sbjct: 1   MGQAEVGCSGAEAVLNLQPNSSVAVGYHPLFGSHDDLILLELDHNLLPDVLHQRVTLRGQ 60

Query: 61  PDEDAVLCTQSKTFAIKFVGTSNSVFLIPPSDHSSFCEIADDCSGKNRNQQSIASVIKVA 120
           PDEDAVLCTQSKT++IKFVGTSNS FLIP S   S  +  +DC  +   +Q  A +IK+A
Sbjct: 61  PDEDAVLCTQSKTYSIKFVGTSNSSFLIPQSGQFSMYDYPEDCDARVHARQLFAPIIKLA 120

Query: 121 PGNMELVEVAPRIDKLKLLLSENPYSSEEALEFEDLEEMEKSKAGLYTWNDLVDKVQASD 180
           PGNMEL EV+PR+DKL+LLLSENPY S+  L+ EDL+   K K GLYTW+DLV  VQAS+
Sbjct: 121 PGNMELTEVSPRLDKLRLLLSENPYKSDGVLDMEDLD-TGKDKTGLYTWDDLVGMVQASN 179

Query: 181 DELRSGLWALSAVELGGYWRIVDERYMGTVLAMLLHNSVLNDWSLDALIEDEVVNVLVSD 240
           +ELRSGL ALSAVE+ GYWRIVDE+YM T+L MLLHNS+LNDWSLD L EDEV N+L SD
Sbjct: 180 NELRSGLQALSAVEIDGYWRIVDEKYMDTILRMLLHNSILNDWSLDFLNEDEVTNLLASD 239

Query: 241 GFPPILASHCLRVYGSKVDENRSKSCLWKLDEKRVCVHFAREILSSGRRKMESFMEEWQR 300
           GFP  LA HCL VYG+KV+       +WKLDE+RVCVHFARE L +G++KME FM EW +
Sbjct: 240 GFPHKLAHHCLNVYGTKVNGGVGTGYVWKLDERRVCVHFARETLRAGKKKMEDFMGEWLK 299

Query: 301 KIPEGMQASFEILEGEVLTERLGVDLWIRAFSVSSLPANPAERFSILFGERPKWEWKDLQ 360
           KIP+GM+A F++LEGEVLTE+LGV+ W+R FS+SSLP+ PAERFS+LF ER KWEWKDL 
Sbjct: 300 KIPDGMEAKFDMLEGEVLTEKLGVETWVRPFSISSLPSTPAERFSMLFRERSKWEWKDLH 359

Query: 361 PYIRDLKVPGQSLEGLLLKYTRRTQPTLDAEPVYSAR 397
           PYIRDLKVPG S E LLLKYTRRTQP+LDAEP++SAR
Sbjct: 360 PYIRDLKVPGLSSEALLLKYTRRTQPSLDAEPIFSAR 396

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224055545|ref|XP_002298532.1| predicted protein [Populus trichocarpa] gi|222845790|gb|EEE83337.1| predicted protein [Populus trichocarpa]

 Score =  564 bits (1454), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 273/395 (69%), Positives = 334/395 (84%), Gaps = 3/395 (0%)

Query: 3   QQHSGCRDAEAVLNLQQNSSISIAYHPLFGPNDDLILLELDEKLLSDVLYQRVSLRGQPD 62
           ++ S  + AE+VLNL+ NSSI+I YH LFG +DDL+LLE+DEKL  D+L++RV+LRGQ D
Sbjct: 2   EKSSRIKGAESVLNLEPNSSIAIGYHALFGSHDDLMLLEIDEKLFPDILHERVALRGQLD 61

Query: 63  EDAVLCTQSKTFAIKFVGTSNSVFLIPPSDHSSFCEIADDCSGKNRNQQSIASVIKVAPG 122
           ED+VLCTQSKT+AIKFVG SNS FLIPPS   + CE + D  G+  +    A VIKVAPG
Sbjct: 62  EDSVLCTQSKTYAIKFVGNSNSPFLIPPSGQFALCENSQDFDGEIND---FAPVIKVAPG 118

Query: 123 NMELVEVAPRIDKLKLLLSENPYSSEEALEFEDLEEMEKSKAGLYTWNDLVDKVQASDDE 182
           NMELVEVAP++D+LKLLLSENPYS E+ LE + +E++EK+KA LY W+DLV++VQASD+E
Sbjct: 119 NMELVEVAPKLDRLKLLLSENPYSYEDVLEMDFMEDVEKNKARLYNWDDLVERVQASDEE 178

Query: 183 LRSGLWALSAVELGGYWRIVDERYMGTVLAMLLHNSVLNDWSLDALIEDEVVNVLVSDGF 242
           LR+GL ALSAVE+ G+WRIVDE+YM  +L MLLHNS+LNDWSLDAL ED+VV+VLVSDGF
Sbjct: 179 LRNGLCALSAVEIDGFWRIVDEKYMDMILRMLLHNSILNDWSLDALNEDDVVSVLVSDGF 238

Query: 243 PPILASHCLRVYGSKVDENRSKSCLWKLDEKRVCVHFAREILSSGRRKMESFMEEWQRKI 302
           P  LA HCL VYGSKVD +  +SC+W+LDE RVCVHFAR+ILS+G++KME+FM EW ++I
Sbjct: 239 PDKLACHCLHVYGSKVDGDVGRSCVWRLDESRVCVHFARQILSTGKKKMETFMAEWLQRI 298

Query: 303 PEGMQASFEILEGEVLTERLGVDLWIRAFSVSSLPANPAERFSILFGERPKWEWKDLQPY 362
           P  MQASF +LEGEVLTE+LGV+ W+ +FSVSSLP  PAERF++LF ER KWEWKDLQPY
Sbjct: 299 PGRMQASFNMLEGEVLTEKLGVETWVYSFSVSSLPLTPAERFNMLFRERSKWEWKDLQPY 358

Query: 363 IRDLKVPGQSLEGLLLKYTRRTQPTLDAEPVYSAR 397
           IRDLKVPG S EGLLLKYTRRTQPTLDA+PV+S+R
Sbjct: 359 IRDLKVPGLSSEGLLLKYTRRTQPTLDADPVFSSR 393

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449432333|ref|XP_004133954.1| PREDICTED: sister chromatid cohesion protein DCC1-like [Cucumis sativus] gi|449518342|ref|XP_004166201.1| PREDICTED: sister chromatid cohesion protein DCC1-like [Cucumis sativus]

 Score =  535 bits (1379), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 262/397 (65%), Positives = 319/397 (80%), Gaps = 4/397 (1%)

Query: 1   MEQQHSGCRDAEAVLNLQQNSSISIAYHPLFGPNDDLILLELDEKLLSDVLYQRVSLRGQ 60
           MEQ++   + A+AVLNLQ NSSISIAYH LFGP+DDL+LLE+DEKLL +VL+QRVS+RGQ
Sbjct: 1   MEQKNPHGKGADAVLNLQPNSSISIAYHSLFGPHDDLVLLEVDEKLLEEVLHQRVSIRGQ 60

Query: 61  PDEDAVLCTQSKTFAIKFVGTSNSVFLIPPSDHSSFCEIADDCSGKNRNQQSIASVIKVA 120
           P+EDAV CT+SKT+ IK+VGTSNSV LIPPS  S +     D   K+ N + +A VIKVA
Sbjct: 61  PEEDAVFCTKSKTYGIKYVGTSNSVLLIPPSGRSEYYTNELDSHQKD-NSKEVAPVIKVA 119

Query: 121 PGNMELVEVAPRIDKLKLLLSENPYSSEEALEFEDLEEMEKSKAGLYTWNDLVDKVQASD 180
           PG MEL E+APRIDKLKLLLSE  YS  +  E E +++ EK    +Y W+DL++KVQASD
Sbjct: 120 PGIMELHEIAPRIDKLKLLLSEEHYSFADEWENEAVDKYEKR---MYNWDDLINKVQASD 176

Query: 181 DELRSGLWALSAVELGGYWRIVDERYMGTVLAMLLHNSVLNDWSLDALIEDEVVNVLVSD 240
           +EL++GL ALSAVE+ GYWRIVDE+YM ++L MLLHN +LNDWSLDAL E  ++NV+  D
Sbjct: 177 NELKAGLQALSAVEIDGYWRIVDEKYMDSMLQMLLHNRILNDWSLDALDEGVIMNVMKMD 236

Query: 241 GFPPILASHCLRVYGSKVDENRSKSCLWKLDEKRVCVHFAREILSSGRRKMESFMEEWQR 300
           GFP  L  HCL VYG K+DE+  KSCLW+L+EKRVCVHFARE+L  G+ K+E  M+EW++
Sbjct: 237 GFPEKLVQHCLHVYGDKLDEHEGKSCLWRLNEKRVCVHFAREVLRKGKMKLEHLMDEWRQ 296

Query: 301 KIPEGMQASFEILEGEVLTERLGVDLWIRAFSVSSLPANPAERFSILFGERPKWEWKDLQ 360
           KIP GM A+F++LEGEVLTERLGV+ W+R F V  LP+NPAERF+ILF ERPKWEWKDLQ
Sbjct: 297 KIPLGMCANFDMLEGEVLTERLGVETWVRGFRVCQLPSNPAERFTILFKERPKWEWKDLQ 356

Query: 361 PYIRDLKVPGQSLEGLLLKYTRRTQPTLDAEPVYSAR 397
           PYIRDL VPG S EGLLLKYTRRTQP  +AE V+SAR
Sbjct: 357 PYIRDLTVPGLSSEGLLLKYTRRTQPNPEAEAVFSAR 393

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356508260|ref|XP_003522876.1| PREDICTED: sister chromatid cohesion protein DCC1-like [Glycine max]

 Score =  529 bits (1362), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 263/391 (67%), Positives = 314/391 (80%), Gaps = 2/391 (0%)

Query: 7   GCRDAEAVLNLQQNSSISIAYHPLFGPNDDLILLELDEKLLSDVLYQRVSLRGQPDEDAV 66
           G R AE + ++   SSIS+AYHP FGP DDL+ LELDEKLL DVL +RV LRGQPDEDAV
Sbjct: 8   GSRGAETLKHIAPGSSISVAYHPSFGPYDDLLFLELDEKLLPDVLNERVVLRGQPDEDAV 67

Query: 67  LCTQSKTFAIKFVGTSNSVFLIPPSDHSSFCEIADDCSGKNRNQQSIASVIKVAPGNMEL 126
           LCT SKT+A+KFVGTSNSV L+PP++HS F E        N   + +  V+KV  GNMEL
Sbjct: 68  LCTLSKTYAMKFVGTSNSVLLVPPANHSEFSENPQKNDSTNDEDKVVVPVLKVVSGNMEL 127

Query: 127 VEVAPRIDKLKLLLSENPYSSEEALEFEDLEEMEKSKAGLYTWNDLVDKVQASDDELRSG 186
           +E APR+DKLKLLLSE PY  EE  +  +LEE ++S+ GLY WN LVD +QASD EL SG
Sbjct: 128 IETAPRLDKLKLLLSEKPYKLEED-DMGNLEENQESRIGLYNWNYLVDNIQASDKELLSG 186

Query: 187 LWALSAVELGGYWRIVDERYMGTVLAMLLHNSVLNDWSLDALIEDEVVNVLVSDGFPPIL 246
           L ALSA+E+ GYWR+VD  YM  +L MLL N+VLNDWSL+AL EDEVV++L SDGFP +L
Sbjct: 187 LQALSALEINGYWRLVDGSYMDMILGMLLKNAVLNDWSLNALNEDEVVSILESDGFPRVL 246

Query: 247 ASHCLRVYGSKVDENRSKSCLWKLDEKRVCVHFAREILSSGRRKMESFMEEWQRKIPEGM 306
           A HCL VYG+KV+E    S +WKLDEKRVC+HFAREIL  G+RK+ESFM+EW++KIP+GM
Sbjct: 247 ARHCLHVYGNKVNECMP-SFVWKLDEKRVCIHFAREILKGGKRKLESFMDEWKQKIPDGM 305

Query: 307 QASFEILEGEVLTERLGVDLWIRAFSVSSLPANPAERFSILFGERPKWEWKDLQPYIRDL 366
             +F+++EGEVLTERLGV+ W+RAFSV+SLP+ PAERFSILF ERPKWEWKDLQPYIRDL
Sbjct: 306 HPTFDLVEGEVLTERLGVETWVRAFSVASLPSTPAERFSILFRERPKWEWKDLQPYIRDL 365

Query: 367 KVPGQSLEGLLLKYTRRTQPTLDAEPVYSAR 397
           KVPG S EGLLLKYTRRTQP+ D EPV+SAR
Sbjct: 366 KVPGLSSEGLLLKYTRRTQPSPDTEPVFSAR 396

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356517690|ref|XP_003527519.1| PREDICTED: sister chromatid cohesion protein DCC1-like [Glycine max]

 Score =  529 bits (1362), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 257/393 (65%), Positives = 318/393 (80%), Gaps = 2/393 (0%)

Query: 5   HSGCRDAEAVLNLQQNSSISIAYHPLFGPNDDLILLELDEKLLSDVLYQRVSLRGQPDED 64
            SG   AEA+ ++   SSIS+AYH  FGP +DL+ LELDEKLL DVL +RV LRGQPDED
Sbjct: 6   QSGSIGAEALKHIAPGSSISVAYHSSFGPYEDLLFLELDEKLLPDVLNERVVLRGQPDED 65

Query: 65  AVLCTQSKTFAIKFVGTSNSVFLIPPSDHSSFCEIADDCSGKNRNQQSIASVIKVAPGNM 124
           AVLCTQSKT+A+KFVGTSNSV L+PP++HS + E        +  ++ +A V+KV  GNM
Sbjct: 66  AVLCTQSKTYAMKFVGTSNSVLLVPPANHSEYYENQLKNDSNSDEEKVVAPVLKVVSGNM 125

Query: 125 ELVEVAPRIDKLKLLLSENPYSSEEALEFEDLEEMEKSKAGLYTWNDLVDKVQASDDELR 184
           EL+E APR+DKLK LLSE PY  EE  +  +LEE ++S+ GLY WNDLVD +QASD+EL 
Sbjct: 126 ELIETAPRLDKLKSLLSEKPYKLEED-DMGNLEENQESRIGLYNWNDLVDNIQASDEELL 184

Query: 185 SGLWALSAVELGGYWRIVDERYMGTVLAMLLHNSVLNDWSLDALIEDEVVNVLVSDGFPP 244
           SGL ALSA+E+ GYWR+VD  YM  +L M+L N+VLNDWSL+AL EDEVV+ L SDGFP 
Sbjct: 185 SGLQALSALEIYGYWRLVDGSYMDMILGMILKNAVLNDWSLNALNEDEVVSTLESDGFPG 244

Query: 245 ILASHCLRVYGSKVDENRSKSCLWKLDEKRVCVHFAREILSSGRRKMESFMEEWQRKIPE 304
           +LA HCL VYG++V+E    S +WKLDEKRVC+HFAR+IL  G+RK+ESFM+EW++KIP+
Sbjct: 245 VLARHCLNVYGNRVNECMP-SFVWKLDEKRVCIHFARDILKGGKRKLESFMDEWRQKIPD 303

Query: 305 GMQASFEILEGEVLTERLGVDLWIRAFSVSSLPANPAERFSILFGERPKWEWKDLQPYIR 364
           GMQ +F+++EGEVLTE++GV+ W+ AFSV+SLP+ PAERFSILF ERPKWEWKDLQPYIR
Sbjct: 304 GMQPTFDLVEGEVLTEKIGVETWVHAFSVASLPSTPAERFSILFRERPKWEWKDLQPYIR 363

Query: 365 DLKVPGQSLEGLLLKYTRRTQPTLDAEPVYSAR 397
           DLK+PG S EGLLLKYTRRTQP+ DAEPV+SAR
Sbjct: 364 DLKLPGLSSEGLLLKYTRRTQPSADAEPVFSAR 396

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|145360995|ref|NP_181986.2| sister chromatid cohesion protein DCC1 [Arabidopsis thaliana] gi|330255348|gb|AEC10442.1| sister chromatid cohesion protein DCC1 [Arabidopsis thaliana]

 Score =  474 bits (1220), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 231/392 (58%), Positives = 298/392 (76%), Gaps = 17/392 (4%)

Query: 11  AEAVLNLQQNSSISIAYHPLFGPNDDLILLELDEKLLSDVLYQRVSLRGQPDEDAVLCTQ 70
           AEAV+NL+   S+ I+YHP FGP++DL+LLE D+KL+SD+ +QRV+LRG PDEDAVLCT+
Sbjct: 7   AEAVINLKSGYSLPISYHPCFGPHEDLLLLEADDKLVSDIFHQRVTLRGLPDEDAVLCTK 66

Query: 71  SKTFAIKFVGTSNSVFLIPPSDHSSFCEIADDCSGKNRNQQSIASVIKVAPGNMELVEVA 130
           SKT+AIKFVG SNS+FLIPPS      +++D     N N     SV+K+APGNMELVE +
Sbjct: 67  SKTYAIKFVGNSNSMFLIPPSIFPGDAQVSD----TNNN----VSVLKIAPGNMELVEAS 118

Query: 131 PRIDKLKLLLSENPYSSEEA-----LEFEDLEEMEKSKAGLYTWNDLVDKVQASDDELRS 185
           PR+DKLK +L  NP+ + E      ++ +DL+   K    LYTW+DLV+ VQASD+ELR+
Sbjct: 119 PRLDKLKQILLANPFGAGEVEAMMDVDNDDLDHSGKKDLALYTWSDLVNTVQASDEELRN 178

Query: 186 GLWALSAVELGGYWRIVDERYMGTVLAMLLHNSVLNDWSLDALIEDEVVNVLVSDGFPPI 245
           GL +LSA+E+ G+WR++DE Y+  +L MLLHN VL DWS D L EDEVVN LV+D FP  
Sbjct: 179 GLQSLSAIEIDGFWRVIDENYLDVILRMLLHNCVLKDWSFDDLDEDEVVNALVADEFPSQ 238

Query: 246 LASHCLRVYGSKVDENRSKSCLWKLDEKRVCVHFAREILSSGRRKMESFMEEWQRKIPEG 305
           LASHCLRV+GSKV+E       WKL+ + VC+HFAR+IL   + ++ESFMEEW++KIP+G
Sbjct: 239 LASHCLRVFGSKVNETDK----WKLEPRLVCLHFARQILREEKMRLESFMEEWKKKIPDG 294

Query: 306 MQASFEILEGEVLTERLGVDLWIRAFSVSSLPANPAERFSILFGERPKWEWKDLQPYIRD 365
           M+  FE+LEGEVLTE++G++  +  FSV SLP+ P ERFS+LF  R KWEWKDL+PY+RD
Sbjct: 295 MEERFEMLEGEVLTEKIGIETRVYTFSVRSLPSTPEERFSVLFKHRSKWEWKDLEPYLRD 354

Query: 366 LKVPGQSLEGLLLKYTRRTQPTLDAEPVYSAR 397
           L VP  S+EGLLLKYTRR QP  DA PV+SAR
Sbjct: 355 LHVPRLSMEGLLLKYTRRAQPKADAPPVFSAR 386

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297828171|ref|XP_002881968.1| protein binding protein [Arabidopsis lyrata subsp. lyrata] gi|297327807|gb|EFH58227.1| protein binding protein [Arabidopsis lyrata subsp. lyrata]

 Score =  451 bits (1161), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 232/391 (59%), Positives = 296/391 (75%), Gaps = 16/391 (4%)

Query: 11  AEAVLNLQQNSSISIAYHPLFGPNDDLILLELDEKLLSDVLYQRVSLRGQPDEDAVLCTQ 70
           A+AV+NL+  SS+ I+YHP FGP++DL+LLE D+KL+SD+ ++RV+LRG PDEDAVLCT+
Sbjct: 10  AKAVINLKPGSSVPISYHPCFGPHEDLLLLEADDKLVSDIFHERVTLRGLPDEDAVLCTK 69

Query: 71  SKTFAIKFVGTSNSVFLIPPSDHSSFCEIADDCSGKNRNQQSIASVIKVAPGNMELVEVA 130
           SKT+AIKFVG SNS+FLIPPS     C      S  N N     SV+K+APGNMELVEV+
Sbjct: 70  SKTYAIKFVGNSNSMFLIPPS----ICPGDAQVSDTNSN----VSVLKLAPGNMELVEVS 121

Query: 131 PRIDKLKLLLSENPYSSEEA----LEFEDLEEMEKSKAGLYTWNDLVDKVQASDDELRSG 186
           PR+DKLK +L  NP+ + E      + +DL+   K    LYTW DLV+ VQASD+ELR+G
Sbjct: 122 PRLDKLKQILLANPFGAGEVEAMMDDDDDLDHNGKRDLALYTWTDLVNTVQASDEELRNG 181

Query: 187 LWALSAVELGGYWRIVDERYMGTVLAMLLHNSVLNDWSLDALIEDEVVNVLVSDGFPPIL 246
           L +LSA+E+ GYWR++DE Y+  +L MLLHN VL DWS D L EDEVV+ LV+D FP  L
Sbjct: 182 LQSLSAIEIDGYWRVIDENYLDVILRMLLHNCVLKDWSFDDLDEDEVVDALVADEFPSQL 241

Query: 247 ASHCLRVYGSKVDENRSKSCLWKLDEKRVCVHFAREILSSGRRKMESFMEEWQRKIPEGM 306
           A HCLRV+GSKV+E       WKL+ + VC+HFAR+IL   + ++ESFMEEW++KIP+GM
Sbjct: 242 AGHCLRVFGSKVNETDK----WKLEPRLVCLHFARQILREEKMRLESFMEEWKKKIPDGM 297

Query: 307 QASFEILEGEVLTERLGVDLWIRAFSVSSLPANPAERFSILFGERPKWEWKDLQPYIRDL 366
           +  FE+LEGEVLTE++G++  +  FSV SLP+ PAERFS+LF  R KWEWKDL+PY+RDL
Sbjct: 298 EERFEMLEGEVLTEKIGIETRVYTFSVRSLPSTPAERFSVLFKHRSKWEWKDLEPYLRDL 357

Query: 367 KVPGQSLEGLLLKYTRRTQPTLDAEPVYSAR 397
            VP  S+EGLLLKYTRR QP  DA PV+SAR
Sbjct: 358 HVPRLSMEGLLLKYTRRAQPKADAPPVFSAR 388

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|195650391|gb|ACG44663.1| protein binding protein [Zea mays]

 Score =  432 bits (1112), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 219/390 (56%), Positives = 284/390 (72%), Gaps = 11/390 (2%)

Query: 11  AEAVLNLQQN-SSISIAYHPLFGPNDDLILLELDEKLLSDVLYQRVSLRGQPDEDAVLCT 69
           AEAVL L    SS+S+ YH  FGP+DDL+LLE  + LL D+L  RV++RG+PDEDAVLCT
Sbjct: 23  AEAVLGLAGGASSVSLCYHQAFGPHDDLVLLEAADDLLPDLLQGRVTVRGRPDEDAVLCT 82

Query: 70  QSKTFAIKFVGTSNSVFLIPPSDHSSFCEIADDCSGKNRNQQSIASVIKVAPGNMELVEV 129
              T+++KFVGTSNS+FLIPP + S+ C   D+ SG   N  ++A+ IK+APG++ELV V
Sbjct: 83  PCATYSMKFVGTSNSMFLIPPGEPSAKCLRPDNTSG---NANALAATIKLAPGSIELVRV 139

Query: 130 APRIDKLKLLLSENPYSSEEALEFEDLEEMEKSKAGLYTWNDLVDKVQASDDELRSGLWA 189
           APR+DKLK LL E PY  +E +  +DL+   K+K GLYTW DL   +QASD EL   L A
Sbjct: 140 APRLDKLKSLLRERPYILDEDIGDDDLQH--KNKKGLYTWQDLCKLIQASDGELLDALNA 197

Query: 190 LSAVELGGYWRIVDERYMGTVLAMLLHNSVLNDWSLDALIEDEVVNVLVSDGFPPILASH 249
           LSAV++ G+WR VD   + T+L M+LHNSVL DW L A+ E +V++V+ SDGF   + +H
Sbjct: 198 LSAVDIDGFWRTVDASSVNTILDMILHNSVLRDWPLKAMPESDVLSVMGSDGFTHNIVTH 257

Query: 250 CLRVYGSKVD-ENRSKSCLWKLDEKRVCVHFAREILSSGRRKMESFMEEWQRKIPEGMQA 308
           CL  +G+KV+ E RS    W LDEKRVC+ FAR  L +G+ K+ +FME+W+R IP GM  
Sbjct: 258 CLNRFGTKVEQEARS---FWSLDEKRVCLQFARRALGAGKMKLSNFMEKWKRSIPSGMCC 314

Query: 309 -SFEILEGEVLTERLGVDLWIRAFSVSSLPANPAERFSILFGERPKWEWKDLQPYIRDLK 367
              ++LEGEVL E+LG + W+ AFSV+ LP  PAERF+ LF ER KWEWKDLQPYIRDL 
Sbjct: 315 PDLQMLEGEVLCEKLGAETWVHAFSVTDLPLAPAERFAALFRERAKWEWKDLQPYIRDLH 374

Query: 368 VPGQSLEGLLLKYTRRTQPTLDAEPVYSAR 397
           VPG S EGLL+KYTRR+QP  +AEP+++AR
Sbjct: 375 VPGASSEGLLIKYTRRSQPNAEAEPIFTAR 404

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|219363363|ref|NP_001136493.1| protein binding protein [Zea mays] gi|194695916|gb|ACF82042.1| unknown [Zea mays] gi|414591282|tpg|DAA41853.1| TPA: protein binding protein [Zea mays]

 Score =  432 bits (1111), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 220/399 (55%), Positives = 287/399 (71%), Gaps = 11/399 (2%)

Query: 2   EQQHSGCRDAEAVLNLQQN-SSISIAYHPLFGPNDDLILLELDEKLLSDVLYQRVSLRGQ 60
           E +  G   A+AVL L    SS+S+ YH  FGP+DDL+LLE  + LL D+L  RV++RG+
Sbjct: 13  EIEWGGGGGADAVLGLAGGASSVSLCYHQAFGPHDDLVLLEAADDLLPDLLQGRVTVRGR 72

Query: 61  PDEDAVLCTQSKTFAIKFVGTSNSVFLIPPSDHSSFCEIADDCSGKNRNQQSIASVIKVA 120
           PDEDAVLCT   T+++KFVGTSNS+FLIPP + S+ C   D+ SG   N  ++A+ IK+A
Sbjct: 73  PDEDAVLCTPCATYSMKFVGTSNSMFLIPPGEPSAKCLRPDNTSG---NANALAATIKLA 129

Query: 121 PGNMELVEVAPRIDKLKLLLSENPYSSEEALEFEDLEEMEKSKAGLYTWNDLVDKVQASD 180
           PG++ELV VAPR+DKLK LL E PY  +E +  +DL+   K+K GLYTW DL   +QASD
Sbjct: 130 PGSIELVRVAPRLDKLKSLLRERPYILDEDIGDDDLQH--KNKKGLYTWQDLCKLIQASD 187

Query: 181 DELRSGLWALSAVELGGYWRIVDERYMGTVLAMLLHNSVLNDWSLDALIEDEVVNVLVSD 240
            EL   L ALSAV++ G+WR VD   + T+L M+LHNSVL DW L A+ E +V++V+ SD
Sbjct: 188 GELLDALNALSAVDIDGFWRTVDASSVNTILDMILHNSVLRDWPLKAMPESDVLSVMGSD 247

Query: 241 GFPPILASHCLRVYGSKVD-ENRSKSCLWKLDEKRVCVHFAREILSSGRRKMESFMEEWQ 299
           GF   + +HCL  +G+KV+ E RS    W LDEKRVC+ FAR  L +G+ K+ +FME+W+
Sbjct: 248 GFTHNIVTHCLNRFGTKVEQEARS---FWSLDEKRVCLQFARRALGAGKMKLSNFMEKWK 304

Query: 300 RKIPEGMQA-SFEILEGEVLTERLGVDLWIRAFSVSSLPANPAERFSILFGERPKWEWKD 358
           R IP GM     ++LEGEVL E+LG + W+ AFSV+ LP  PAERF+ LF ER KWEWKD
Sbjct: 305 RSIPSGMCCPDLQMLEGEVLCEKLGAETWVHAFSVTDLPLAPAERFAALFRERAKWEWKD 364

Query: 359 LQPYIRDLKVPGQSLEGLLLKYTRRTQPTLDAEPVYSAR 397
           LQPYIRDL VPG S EGLL+KYTRR+QP  +AEP+++AR
Sbjct: 365 LQPYIRDLHVPGASSEGLLIKYTRRSQPNAEAEPIFTAR 403

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	397
TAIR|locus:2042466	386	AT2G44580 [Arabidopsis thalian	0.944	0.971	0.556	1.4e-112
UNIPROTKB|Q9BVC3	393	DSCC1 "Sister chromatid cohesi	0.806	0.814	0.331	9.9e-39
RGD|1561749	399	Dscc1 "defective in sister chr	0.798	0.794	0.328	3.4e-38
UNIPROTKB|F1MTU0	394	DSCC1 "Uncharacterized protein	0.808	0.814	0.320	8e-37
MGI|MGI:1919357	399	Dscc1 "defective in sister chr	0.806	0.802	0.322	8e-37
ZFIN|ZDB-GENE-040912-35	391	dscc1 "defective in sister chr	0.816	0.828	0.313	7.2e-36
UNIPROTKB|Q6GL75	391	dscc1 "Sister chromatid cohesi	0.778	0.790	0.308	9.5e-34
UNIPROTKB|Q6GMB0	390	dscc1 "Sister chromatid cohesi	0.775	0.789	0.311	9.5e-34
UNIPROTKB|F1NKY0	391	DSCC1 "Uncharacterized protein	0.811	0.823	0.297	4.1e-33
UNIPROTKB|F1S283	362	DSCC1 "Uncharacterized protein	0.727	0.798	0.324	5.2e-33

TAIR|locus:2042466 AT2G44580 [Arabidopsis thaliana (taxid:3702)]

 Score = 1111 (396.2 bits), Expect = 1.4e-112, P = 1.4e-112
 Identities = 218/392 (55%), Positives = 277/392 (70%)

Query:    11 AEAVLNLQQNSSISIAYHPLFGPNXXXXXXXXXXXXXXXXXYQRVSLRGQPDEDAVLCTQ 70
             AEAV+NL+   S+ I+YHP FGP+                 +QRV+LRG PDEDAVLCT+
Sbjct:     7 AEAVINLKSGYSLPISYHPCFGPHEDLLLLEADDKLVSDIFHQRVTLRGLPDEDAVLCTK 66

Query:    71 SKTFAIKFVGTSNSVFLIPPSDHSSFCEIADDCSGKNRNQQSIASVIKVAPGNMELVEVA 130
             SKT+AIKFVG SNS+FLIPPS      +++D     N N     SV+K+APGNMELVE +
Sbjct:    67 SKTYAIKFVGNSNSMFLIPPSIFPGDAQVSDT----NNN----VSVLKIAPGNMELVEAS 118

Query:   131 PRIDKLKLLLSENPYSSXXXXXXXXXXXXXKSKAG-----LYTWNDLVDKVQASDDELRS 185
             PR+DKLK +L  NP+ +                +G     LYTW+DLV+ VQASD+ELR+
Sbjct:   119 PRLDKLKQILLANPFGAGEVEAMMDVDNDDLDHSGKKDLALYTWSDLVNTVQASDEELRN 178

Query:   186 GLWALSAVELGGYWRIVDERYMGTVLAMLLHNSVLNDWSLDALIEDEVVNVLVSDGFPPI 245
             GL +LSA+E+ G+WR++DE Y+  +L MLLHN VL DWS D L EDEVVN LV+D FP  
Sbjct:   179 GLQSLSAIEIDGFWRVIDENYLDVILRMLLHNCVLKDWSFDDLDEDEVVNALVADEFPSQ 238

Query:   246 LASHCLRVYGSKVDENRSKSCLWKLDEKRVCVHFAREILSSGRRKMESFMEEWQRKIPEG 305
             LASHCLRV+GSKV+E       WKL+ + VC+HFAR+IL   + ++ESFMEEW++KIP+G
Sbjct:   239 LASHCLRVFGSKVNETDK----WKLEPRLVCLHFARQILREEKMRLESFMEEWKKKIPDG 294

Query:   306 MQASFEILEGEVLTERLGVDLWIRAFSVSSLPANPAERFSILFGERPKWEWKDLQPYIRD 365
             M+  FE+LEGEVLTE++G++  +  FSV SLP+ P ERFS+LF  R KWEWKDL+PY+RD
Sbjct:   295 MEERFEMLEGEVLTEKIGIETRVYTFSVRSLPSTPEERFSVLFKHRSKWEWKDLEPYLRD 354

Query:   366 LKVPGQSLEGLLLKYTRRTQPTLDAEPVYSAR 397
             L VP  S+EGLLLKYTRR QP  DA PV+SAR
Sbjct:   355 LHVPRLSMEGLLLKYTRRAQPKADAPPVFSAR 386

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=ISS

UNIPROTKB|Q9BVC3 DSCC1 "Sister chromatid cohesion protein DCC1" [Homo sapiens (taxid:9606)]

 Score = 414 (150.8 bits), Expect = 9.9e-39, P = 9.9e-39
 Identities = 115/347 (33%), Positives = 174/347 (50%)

Query:    57 LRGQPDEDAVLCTQSKTFAIKFVGTSNSVFLIPPSDHSSFCEIADDCSGKNRNQQSIASV 116
             +RG  DE AVLC++ KT+ +K   TSN +  IP       C+  D    ++ +   I + 
Sbjct:    64 IRGDKDEQAVLCSKDKTYDLKIADTSNMLLFIPG------CKTPDQLKKEDSHCNIIHTE 117

Query:   117 IKVAPGNM-ELVEVAPRIDKLKLLLSENPYSSXXXXXXXXXXXXXKSKAGLYTWNDLVDK 175
             I     N  EL    P++ KLK LL ENPY                S +  YT  DL+D+
Sbjct:   118 IFGFSNNYWELRRRRPKLKKLKKLLMENPYEGPDSQKEKD------SNSSKYTTEDLLDQ 171

Query:   176 VQASDDELRSGLWALSAVELGGYWRIVDERYMGTVLAMLLHNSVLND---WSLDALIEDE 232
             +QAS++E+ + L  L+A ++GGYWRI++  Y    + +L H + L D   WS   +  + 
Sbjct:   172 IQASEEEIMTQLQVLNACKIGGYWRILEFDYE---MKLLNHVTQLVDSESWSFGKVPLNT 228

Query:   233 VVNVLVSDGFPPILASHCLRVYGSK-VDENRSKSCLWKLDEKRVCVHFAREILSSGRR-K 290
              +  L     P  +  HCL+ YG K VDE       ++LD  ++C   AR +L +  +  
Sbjct:   229 CLQEL-GPLEPEEMIEHCLKCYGKKYVDEGE---VYFELDADKICRAAARMLLQNAVKFN 284

Query:   291 MESFMEEWQRKIPEGMQASFEILEGEVLTERLGVDLWIRAFSVSSLPANPAERFSILFGE 350
             +  F E WQ+ +PEGM  S + L+G  L +R      I    V  LP +  ERF+ LF  
Sbjct:   285 LAEFQEVWQQSVPEGMVTSLDQLKGLALVDRHSRPEIIFLLKVDDLPEDNQERFNSLFSL 344

Query:   351 RPKWEWKDLQPYIRDLKVPGQSLEGLLLKYTRRTQPTLDAEPVYSAR 397
             R KW  +D+ PYI+DL    Q++  LL KY+  +    +   VY++R
Sbjct:   345 REKWTEEDIAPYIQDLCGEKQTIGALLTKYSHSSMQ--NGVKVYNSR 389

GO:0003677 "DNA binding" evidence=IEA

GO:0006260 "DNA replication" evidence=IEA

GO:0034088 "maintenance of mitotic sister chromatid cohesion" evidence=IMP

GO:0006275 "regulation of DNA replication" evidence=IMP

GO:0034421 "post-translational protein acetylation" evidence=IMP

GO:0000785 "chromatin" evidence=IDA

GO:0000775 "chromosome, centromeric region" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0005654 "nucleoplasm" evidence=IDA

RGD|1561749 Dscc1 "defective in sister chromatid cohesion 1 homolog (S. cerevisiae)" [Rattus norvegicus (taxid:10116)]

 Score = 409 (149.0 bits), Expect = 3.4e-38, P = 3.4e-38
 Identities = 115/350 (32%), Positives = 177/350 (50%)

Query:    57 LRGQPDEDAVLCTQSKTFAIKFVGTSNSVFLIPPSDHSSFCEIADDCSGKNRNQQSIASV 116
             +RG  DE AVLC++ KT+ +K   TSN +  IP       C+  D   G+      + + 
Sbjct:    70 IRGDKDEQAVLCSKDKTYDLKIADTSNMLLFIPG------CKTPDQLKGEETQSNIVHTE 123

Query:   117 IKVAPGNM-ELVEVAPRIDKLKLLLSENPYSSXXXXXXXXXXXXXKSKAGLYTWNDLVDK 175
             I     N  EL    P++ KLK LL EN Y               +SK   YT  DL+++
Sbjct:   124 IFGFSNNYWELRRCRPKLKKLKKLLMENTYEGPDSQKEEDPS---RSK---YTTEDLLNQ 177

Query:   176 VQASDDELRSGLWALSAVELGGYWRIVDERYMGTVLAMLLHNSVLND---WSLDALIEDE 232
             +QAS++E+ + L  L+A E+GGYWRI++  Y    + +L H + L D   WS + +    
Sbjct:   178 IQASEEEIMAQLQVLNACEIGGYWRILEFDYE---IKLLNHVTQLVDSESWSFNKV---- 230

Query:   233 VVNVLVSD-G--FPPILASHCLRVYGSK-VDENRSKSCLWKLDEKRVCVHFAREILSSGR 288
              +NV + + G   P  +  HCL+ YG K VD+       ++L+  +VC   A  +L +  
Sbjct:   231 PLNVCLQELGPLEPEEMIEHCLKCYGKKYVDKGE---VYFELNADKVCRATAEMLLQNAV 287

Query:   289 R-KMESFMEEWQRKIPEGMQASFEILEGEVLTERLGVDLWIRAFSVSSLPANPAERFSIL 347
             +  +  F E WQ+ +PEGM    + L+G  L +R      I  F V +LP    +RF+ L
Sbjct:   288 KFNLAEFQEVWQQSVPEGMTTRLDQLKGLALVDRSSRPEIIFLFKVDALPEGTQDRFNSL 347

Query:   348 FGERPKWEWKDLQPYIRDLKVPGQSLEGLLLKYTRRTQPTLDAEPVYSAR 397
             F  R KW  +D+ PYI+DL    Q++  LL KY+R +    +   VY++R
Sbjct:   348 FSLREKWTEEDIAPYIQDLCGEKQTIGALLTKYSRSSMQ--NGVKVYNSR 395

GO:0000775 "chromosome, centromeric region" evidence=IEA;ISO

GO:0000785 "chromatin" evidence=IEA;ISO

GO:0005654 "nucleoplasm" evidence=IEA;ISO

GO:0006275 "regulation of DNA replication" evidence=IEA;ISO

GO:0034088 "maintenance of mitotic sister chromatid cohesion" evidence=IEA;ISO

GO:0034421 "post-translational protein acetylation" evidence=IEA;ISO

UNIPROTKB|F1MTU0 DSCC1 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 396 (144.5 bits), Expect = 8.0e-37, P = 8.0e-37
 Identities = 111/346 (32%), Positives = 168/346 (48%)

Query:    57 LRGQPDEDAVLCTQSKTFAIKFVGTSNSVFLIPPSDHSSFCEIADDCSGKNRNQQSIASV 116
             +RG  DE AVLC++ KT+ +K   TSN +  IP       C+I +    +  +   I + 
Sbjct:    65 IRGDKDEQAVLCSEDKTYDLKVADTSNMLLFIPG------CKIPEQLKMEETHGNIIHTE 118

Query:   117 IKVAPGNM-ELVEVAPRIDKLKLLLSENPYSSXXXXXXXXXXXXXKSKAGLYTWNDLVDK 175
             I     N  EL    P++ KLK LL EN Y                SK   YT  DL+D+
Sbjct:   119 IFGFSNNYWELRRCRPKLKKLKKLLMENTYEGPDSEKEKDSSH---SK---YTTEDLLDQ 172

Query:   176 VQASDDELRSGLWALSAVELGGYWRIVDERYMGTVLAMLLHNSVLND---WSLDALIEDE 232
             +QAS++E+ + L  L+A E+GGYWRI++  Y    + +L H + L D   WS   +  + 
Sbjct:   173 IQASEEEIMTQLQVLNACEIGGYWRILEFDYE---MKLLNHITQLVDSESWSFSKVPLNT 229

Query:   233 VVNVLVSDGFPPILASHCLRVYGSKVDENRSKSCLWKLDEKRVCVHFAREILSSGRR-KM 291
              +  L     P  +  HCL+ YG K  E  +    ++L   ++C   A+ +L +  +  +
Sbjct:   230 CLQEL-GPLEPEEMIEHCLKCYGKKYTEEGA--VYFELSADKICRATAQMLLQNAVKFNL 286

Query:   292 ESFMEEWQRKIPEGMQASFEILEGEVLTERLGVDLWIRAFSVSSLPANPAERFSILFGER 351
               F E WQ+ +PEGM    + L+G  L +R      I       LP    ERF+ LF  R
Sbjct:   287 AEFQEVWQQSVPEGMTTRLDQLKGLALVDRQSRPEIIFLLKAEDLPEGDQERFNSLFSLR 346

Query:   352 PKWEWKDLQPYIRDLKVPGQSLEGLLLKYTRRTQPTLDAEPVYSAR 397
              KW  +D+ PYI+DL    Q++  LL KY R +    +   VY++R
Sbjct:   347 EKWTEEDIAPYIQDLCGEKQTIGALLTKYARSSMQ--NGVKVYNSR 390

GO:0034421 "post-translational protein acetylation" evidence=IEA

GO:0034088 "maintenance of mitotic sister chromatid cohesion" evidence=IEA

GO:0006275 "regulation of DNA replication" evidence=IEA

GO:0005654 "nucleoplasm" evidence=IEA

GO:0000785 "chromatin" evidence=IEA

GO:0000775 "chromosome, centromeric region" evidence=IEA

MGI|MGI:1919357 Dscc1 "defective in sister chromatid cohesion 1 homolog (S. cerevisiae)" [Mus musculus (taxid:10090)]

 Score = 396 (144.5 bits), Expect = 8.0e-37, P = 8.0e-37
 Identities = 112/347 (32%), Positives = 171/347 (49%)

Query:    57 LRGQPDEDAVLCTQSKTFAIKFVGTSNSVFLIPPSDHSSFCEIADDCSGKNRNQQSIASV 116
             +RG  DE AVLC++ KT+ +K   TSN +  IP       C+  D    +      + + 
Sbjct:    70 IRGDKDEQAVLCSKDKTYDLKIADTSNMLLFIPG------CKTPDQLKEEETPSAIVHTE 123

Query:   117 IKVAPGNM-ELVEVAPRIDKLKLLLSENPYSSXXXXXXXXXXXXXKSKAGLYTWNDLVDK 175
             I     N  EL    P++ KLK LL EN Y               +SK   YT  DL++ 
Sbjct:   124 IFGFSNNYWELRRCRPKLKKLKRLLMENTYEGPDSQKEEDAS---RSK---YTTEDLLNH 177

Query:   176 VQASDDELRSGLWALSAVELGGYWRIVDERYMGTVLAMLLHNSVLND---WSLDALIEDE 232
             +QAS++E+ + L  L+A E+GGYWRI++  Y    + +L H + L D   WSLD +    
Sbjct:   178 IQASEEEIMAQLQVLNACEIGGYWRILEFDYE---IKLLNHVTQLVDSESWSLDRVPLTV 234

Query:   233 VVNVLVSDGFPPILASHCLRVYGSK-VDENRSKSCLWKLDEKRVCVHFAREILSSGRR-K 290
              +  L     P  +  HCL+ YG + VD++      ++LD  ++C   A  +L +  +  
Sbjct:   235 CLQEL-GPLEPEEMIEHCLKCYGKRYVDKD---DVYFELDADKICRVTAEMLLQNAVKFN 290

Query:   291 MESFMEEWQRKIPEGMQASFEILEGEVLTERLGVDLWIRAFSVSSLPANPAERFSILFGE 350
             +  F E WQ+ +PEGM    + L+G  L +R      I    V  LP    +RF+ LF  
Sbjct:   291 LAEFQEVWQQSVPEGMTTRLDQLKGLALVDRNSRPEIIFLLKVDDLPEGTQDRFNSLFSL 350

Query:   351 RPKWEWKDLQPYIRDLKVPGQSLEGLLLKYTRRTQPTLDAEPVYSAR 397
             R KW  +D+ PYI+DL    Q++  LL KY+R +    +   VY++R
Sbjct:   351 REKWTEEDITPYIQDLCGEKQTIGALLTKYSRSSMQ--NGIKVYNSR 395

GO:0000775 "chromosome, centromeric region" evidence=ISO

GO:0000785 "chromatin" evidence=ISO

GO:0003674 "molecular_function" evidence=ND

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005654 "nucleoplasm" evidence=ISO

GO:0006260 "DNA replication" evidence=IEA

GO:0006275 "regulation of DNA replication" evidence=ISO

GO:0007049 "cell cycle" evidence=IEA

GO:0034088 "maintenance of mitotic sister chromatid cohesion" evidence=ISO

GO:0034421 "post-translational protein acetylation" evidence=ISO

ZFIN|ZDB-GENE-040912-35 dscc1 "defective in sister chromatid cohesion 1 homolog (S. cerevisiae)" [Danio rerio (taxid:7955)]

 Score = 387 (141.3 bits), Expect = 7.2e-36, P = 7.2e-36
 Identities = 108/344 (31%), Positives = 163/344 (47%)

Query:    57 LRGQPDEDAVLCTQSKTFAIKFVGTSNSVFLIPPSDHSSFCEIADDCSGKNRNQQSIASV 116
             +RG  DE AVLC++ KT+ +K   TSN +  +P       C+  D  S    + Q + + 
Sbjct:    60 IRGDKDEHAVLCSEDKTYDLKIADTSNLLLFVPG------CKTPDQLSDIPASPQLMHTQ 113

Query:   117 I-KVAPGNMELVEVAPRIDKLKLLLSENPYSSXXXXXXXXXXXXXKSKAGL-YTWNDLVD 174
             I   +    EL    PR+ KLK LL ENPY               +   GL Y+  DL++
Sbjct:   114 IWGFSNCYWELRRQRPRLKKLKKLLMENPYDGPPVGMQ-------EEAPGLKYSMEDLLE 166

Query:   175 KVQASDDELRSGLWALSAVELGGYWRIVDERYMGTVLAMLLHNSVLNDWSLDALIEDEVV 234
             ++QAS +EL + L  + A E+ G+WRI+D  Y   +L  +        WS   +     +
Sbjct:   167 RIQASKEELEAHLGNVHACEIDGFWRILDFDYEMKLLGHVTQLVDSESWSFSKVPLSVCL 226

Query:   235 NVLVSDGFPPILASHCLRVYGSKVDENRSKSCLWKLDEKRVCVHFAREILSSGRR-KMES 293
               L S   P  +  HCL  YG +   +     ++ LDE +VC   A+ +L +  +  +  
Sbjct:   227 EELGSLE-PKAMIEHCLNCYGRR-HSDEDNQVMYALDEDKVCRATAQLLLQNAVKFNLSE 284

Query:   294 FMEEWQRKIPEGMQASFEILEGEVLTERLGVDLWIRAFSVSSLPANPAERFSILFGERPK 353
             F E WQ+ +PEGM    + L G  L +R      I    V  LP +  ERF+ LF  R K
Sbjct:   285 FQEVWQQSVPEGMGTRLDQLRGLALIDRSSKPETISLLRVEDLPEDTLERFNSLFSLREK 344

Query:   354 WEWKDLQPYIRDLKVPGQSLEGLLLKYTRRTQPTLDAEPVYSAR 397
             W   D++PYI+DL    Q+   LL K+ R +    +   VY++R
Sbjct:   345 WTQDDIEPYIQDLCGEKQTTGALLTKHARSSMQ--NGIKVYNSR 386

GO:0000785 "chromatin" evidence=ISS

GO:0006275 "regulation of DNA replication" evidence=ISS

GO:0034088 "maintenance of mitotic sister chromatid cohesion" evidence=ISS

GO:0006260 "DNA replication" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0007049 "cell cycle" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

UNIPROTKB|Q6GL75 dscc1 "Sister chromatid cohesion protein DCC1" [Xenopus (Silurana) tropicalis (taxid:8364)]

 Score = 367 (134.2 bits), Expect = 9.5e-34, P = 9.5e-34
 Identities = 102/331 (30%), Positives = 154/331 (46%)

Query:    57 LRGQPDEDAVLCTQSKTFAIKFVGTSNSVFLIPPSDHSSFCEIADDCSGKNRNQQSI-AS 115
             +RG   + AVLC+Q KT+ +K   TSN +  IP       C+  D      +    I   
Sbjct:    61 IRGDKSDHAVLCSQDKTYDLKIADTSNLLLFIPG------CKTPDQLPADQQPLTIINCE 114

Query:   116 VIKVAPGNMELVEVAPRIDKLKLLLSENPYSSXXXXXXXXXXXXXKSKAGLYTWNDLVDK 175
             +   +    EL    P++ KLK LL EN Y+                   L+T  DL++ 
Sbjct:   115 IAGFSNHYWELRRCRPKLKKLKKLLMENTYNGPENERESQDNS-------LHTTEDLLNM 167

Query:   176 VQASDDELRSGLWALSAVELGGYWRIVDERYMGTVLAMLLHNSVLND---WSLDALIEDE 232
             +QAS++EL   L A+ A  + G+WR++D  Y    + +L H + L D   WS   +    
Sbjct:   168 IQASNEELVDHLKAIHACSINGFWRLLDFDYE---MKLLNHITQLIDSESWSFSKVPLPV 224

Query:   233 VVNVLVSDGFPPILASHCLRVYGSKVDENRSKSCLWKLDEKRVCVHFAREILSSGRR-KM 291
              +  L S   P  +  HCL  YG ++ +  +    + LDE ++C   A  +L +  +  +
Sbjct:   225 CLQELRSLE-PEEMIEHCLTCYGKRLIDEGTGGDFFALDEDKICRATALMLLQNAVKFNL 283

Query:   292 ESFMEEWQRKIPEGMQASFEILEGEVLTERLGVDLWIRAFSVSSLPANPAERFSILFGER 351
               F E WQ+ +PEGM    + L+G  L +R      I       LP +  ERF+ LFG R
Sbjct:   284 AEFQEVWQQSVPEGMNTRLDQLKGLALVDRTSRPETIFLLKTEDLPEDTQERFNTLFGMR 343

Query:   352 PKWEWKDLQPYIRDLKVPGQSLEGLLLKYTR 382
              KW   D+ PYI+DL    Q++  LL KY R
Sbjct:   344 EKWAEADIAPYIKDLCGEKQTIGALLTKYAR 374

GO:0000785 "chromatin" evidence=ISS

GO:0006275 "regulation of DNA replication" evidence=ISS

GO:0034088 "maintenance of mitotic sister chromatid cohesion" evidence=ISS

UNIPROTKB|Q6GMB0 dscc1 "Sister chromatid cohesion protein DCC1" [Xenopus laevis (taxid:8355)]

 Score = 367 (134.2 bits), Expect = 9.5e-34, P = 9.5e-34
 Identities = 103/331 (31%), Positives = 153/331 (46%)

Query:    57 LRGQPDEDAVLCTQSKTFAIKFVGTSNSVFLIPPSDHSSFCEIADDCSGKNRNQQSI-AS 115
             +RG   + AVLC+Q KT+ +K   TSN +  IP       C++ D      +    I   
Sbjct:    61 IRGDKSDHAVLCSQDKTYDLKIADTSNLLLFIPG------CKLPDQLPADQQPLSVIHCE 114

Query:   116 VIKVAPGNMELVEVAPRIDKLKLLLSENPYSSXXXXXXXXXXXXXKSKAGLYTWNDLVDK 175
             +   +    EL    P++ KLK LL EN Y+                +  LYT  DL+  
Sbjct:   115 IAGFSNHYWELRRCRPKLKKLKKLLMENTYNGPENESESS------QETSLYTTEDLLSV 168

Query:   176 VQASDDELRSGLWALSAVELGGYWRIVDERYMGTVLAMLLHNSVLND---WSLDALIEDE 232
             +Q+S +EL   L A+ A  + G WR++D  Y    + +L H + L D   WS   +    
Sbjct:   169 IQSSTEELMDHLKAIHACNIKGIWRLLDFDYE---MKLLNHITQLIDSESWSFSKVPLQV 225

Query:   233 VVNVLVSDGFPPILASHCLRVYGSKVDENRSKSCLWKLDEKRVCVHFAREILSSGRR-KM 291
              +  L S   P  +  HCL  YG ++ E     C + LDE ++C   A  +L +  +  +
Sbjct:   226 CLQELRSLE-PEEMIEHCLTCYGKRLMEEGG-DC-FALDEDKICRATALMLLQNAVKFNL 282

Query:   292 ESFMEEWQRKIPEGMQASFEILEGEVLTERLGVDLWIRAFSVSSLPANPAERFSILFGER 351
               F E WQ+ +P+GM    + L+G  L +R      I       LP +  ERF+ LFG R
Sbjct:   283 AEFQEVWQQSVPDGMNTRLDQLKGLALVDRTSRPETIFLLQTEDLPEDTQERFNTLFGMR 342

Query:   352 PKWEWKDLQPYIRDLKVPGQSLEGLLLKYTR 382
              KW   D+ PYI+DL    Q++  LL KY R
Sbjct:   343 EKWTEADIAPYIQDLCGEKQTIGALLTKYAR 373

GO:0000785 "chromatin" evidence=ISS

GO:0006275 "regulation of DNA replication" evidence=ISS

GO:0034088 "maintenance of mitotic sister chromatid cohesion" evidence=ISS

UNIPROTKB|F1NKY0 DSCC1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 361 (132.1 bits), Expect = 4.1e-33, P = 4.1e-33
 Identities = 103/346 (29%), Positives = 164/346 (47%)

Query:    57 LRGQPDEDAVLCTQSKTFAIKFVGTSNSVFLIPPSDHSSFCEIADDCSGKNRNQQSIASV 116
             +RG+ DE AVLC++ KT+ +K   TSN +  IP       C   ++ +    +   I S 
Sbjct:    61 IRGEKDEQAVLCSKDKTYDVKIADTSNMLLFIPG------CRTPEELNADQASCNIIHSQ 114

Query:   117 IKVAPGNM-ELVEVAPRIDKLKLLLSENPYSSXXXXXXXXXXXXXKSKAGLYTWNDLVDK 175
             I     N  EL    P++ KL+ LL E+PY                SK   YT  DL+  
Sbjct:   115 IAGFSNNYWELRRCRPKLKKLRKLLMEDPYEGPDSAKDQTSTV---SK---YTTEDLLSL 168

Query:   176 VQASDDELRSGLWALSAVELGGYWRIVDERYMGTVLAMLLHNSVLND---WSLDALIEDE 232
             +QAS++E+   L  + A  + GYWR+++  Y    + +L H + L D   W  + +    
Sbjct:   169 IQASEEEILHQLQVIGACVIEGYWRVLEFDYE---MKLLNHVTQLIDSESWPFNKVPLRT 225

Query:   233 VVNVLVSDGFPPILASHCLRVYGSKVDENRSKSCLWKLDEKRVCVHFAREILSSGRR-KM 291
              +  L     P  +  H L  YG K  ++  +   +++ E ++C   A+ +L +  +  +
Sbjct:   226 CLEEL-GPLEPTEMIEHILSSYGRKYSDDAGE-VYFEMREDKICRAIAQMLLKNAVKFNL 283

Query:   292 ESFMEEWQRKIPEGMQASFEILEGEVLTERLGVDLWIRAFSVSSLPANPAERFSILFGER 351
               F E WQ+ +PEGM  S + L+G  L ++      I    V  LP +  ERF+ LF  R
Sbjct:   284 SEFHEVWQQSVPEGMSTSLDQLKGLALVDKASRPETIFLLKVEDLPEDNQERFNSLFSIR 343

Query:   352 PKWEWKDLQPYIRDLKVPGQSLEGLLLKYTRRTQPTLDAEPVYSAR 397
              KW   D+ PYI+DL    Q++  LL KY R +    +   VY++R
Sbjct:   344 EKWTEVDITPYIQDLCAEKQTVGALLTKYARSS--VQNGIKVYNSR 387

GO:0000775 "chromosome, centromeric region" evidence=IEA

GO:0000785 "chromatin" evidence=IEA

GO:0005654 "nucleoplasm" evidence=IEA

GO:0006275 "regulation of DNA replication" evidence=IEA

GO:0034088 "maintenance of mitotic sister chromatid cohesion" evidence=IEA

GO:0034421 "post-translational protein acetylation" evidence=IEA

UNIPROTKB|F1S283 DSCC1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 360 (131.8 bits), Expect = 5.2e-33, P = 5.2e-33
 Identities = 102/314 (32%), Positives = 152/314 (48%)

Query:    57 LRGQPDEDAVLCTQSKTFAIKFVGTSNSVFLIPPSDHSSFCEIADDCSGKNRNQQSIASV 116
             +RG  DE AVLC++ KT+ +K   TSN +  +P       C+  D    +  +   I S 
Sbjct:    68 IRGDKDEQAVLCSKDKTYDLKIADTSNMLLFLPD------CKTPDQLKMEETHCNIIHSE 121

Query:   117 IKVAPGNM-ELVEVAPRIDKLKLLLSENPYSSXXXXXXXXXXXXXKSKAGLYTWNDLVDK 175
             I     N  EL    P++ KLK LL EN Y               +SK   YT  DL+D+
Sbjct:   122 IFGFSNNYWELRRCRPKLKKLKKLLMENTYEGPDSQKEKDSN---RSK---YTTEDLLDQ 175

Query:   176 VQASDDELRSGLWALSAVELGGYWRIVDERYMGTVLAMLLHNSVLND---WSLDALIEDE 232
             +QAS++E+ + L  L+A E+GGYWRI++  Y    + +L H + L D   WS   +  + 
Sbjct:   176 IQASEEEIMAQLQVLNACEIGGYWRILEFDYE---MKLLNHVTQLVDSESWSFSKVPLNT 232

Query:   233 VVNVLVSDGFPPILASHCLRVYGSK-VDENRSKSCLWKLDEKRVCVHFAREILSSGRR-K 290
              +  L     P  +  HCL  YG K +DE       ++L   ++C   A+ +L +  +  
Sbjct:   233 CLQEL-GPLEPEEMIEHCLNCYGKKYLDEGE---VYFELSADKICRATAQMLLQNAVKFN 288

Query:   291 MESFMEEWQRKIPEGMQASFEILEGEVLTERLGVDLWIRAFSVSSLPANPAERFSILFGE 350
             +  F E WQ+ +PEGM    + L+G  L +R      I    V  LP    ERF+ LF  
Sbjct:   289 LAEFQEVWQQSVPEGMITRLDQLKGLALVDRHSRPEIIFLLKVDDLPEENQERFNSLFSL 348

Query:   351 RPKWEWKDLQPYIR 364
             R KW  +D+ PYI+
Sbjct:   349 REKWTEEDIAPYIQ 362

GO:0034421 "post-translational protein acetylation" evidence=IEA

GO:0034088 "maintenance of mitotic sister chromatid cohesion" evidence=IEA

GO:0006275 "regulation of DNA replication" evidence=IEA

GO:0005654 "nucleoplasm" evidence=IEA

GO:0000785 "chromatin" evidence=IEA

GO:0000775 "chromosome, centromeric region" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q66I84	DCC1_DANRE	No assigned EC number	0.3131	0.8967	0.9104	yes	no
Q14AI0	DCC1_MOUSE	No assigned EC number	0.3252	0.8589	0.8546	yes	no
Q6GL75	DCC1_XENTR	No assigned EC number	0.3154	0.8362	0.8491	yes	no
Q9BVC3	DCC1_HUMAN	No assigned EC number	0.3333	0.8589	0.8676	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	397
pfam09724	325	pfam09724, DUF2036, Uncharacterized conserved prot	4e-87

>gnl|CDD|220363 pfam09724, DUF2036, Uncharacterized conserved protein (DUF2036)

 Score =  266 bits (683), Expect = 4e-87
 Identities = 116/340 (34%), Positives = 169/340 (49%), Gaps = 26/340 (7%)

Query: 36  DLILLELDEKLLSDV--LYQRVSLRGQPDEDAVLCTQSKTFAIKFVGTSNSVFLIP---- 89
           D  LLELDE LL  +      ++ +G  D+ AVLCT  KT+ +K   TSN++ L+P    
Sbjct: 1   DYKLLELDEDLLDAIKEGQGSLTFKGLKDDKAVLCTDDKTYDLKQAETSNTLLLLPECKP 60

Query: 90  PSDHSSFCEIADDCSGKNRNQQSIASVIKVAPGNMELVEVAPRIDKLKLLLSENPYSSEE 149
           P D+S   EI       N+       ++ +A    EL E+ P++DKLK LL    Y   E
Sbjct: 61  PDDNSPTDEILTVEEPDNKLD-----ILGIAHSYFELREIRPKLDKLKELLRLPIYDGPE 115

Query: 150 ALEFEDLEEMEKSKAGLYTWNDLVDKVQASDDELRSGLWALSAVELGGYWRIVDERYMGT 209
                 +E      + LYT+ DL+D VQ S++E   GL  L A+E+ G  R++   Y   
Sbjct: 116 ------VEGEIDRNSLLYTFEDLLDNVQCSEEEFEQGLKKLGAIEIDGRARVLSPDYETK 169

Query: 210 VLAMLLHNSVLNDWSLDALIEDEVVNVLVSDGFPPILASHCLRVYGSKVDENRSKSCLWK 269
            L +LL     N W LD +  DEVV  L    +P  +    L  +G+K  E   +   + 
Sbjct: 170 ALDLLLVLLDSNSWDLDEVSLDEVVEALRPSEYPEEVIETVLNKFGTKESEEGDR---FA 226

Query: 270 LDEKRVCVHFAREILSSGRRK---MESFMEEWQRKIPE--GMQASFEILEGEVLTERLGV 324
           LDE +VC  FA ++L  G      ++ FME W+  +PE  GM    + L G  L +R   
Sbjct: 227 LDEDKVCRWFAEQLLQKGLAGKMNLDEFMETWKESLPEFFGMDLDLDQLRGYALLDR-PA 285

Query: 325 DLWIRAFSVSSLPANPAERFSILFGERPKWEWKDLQPYIR 364
           +  I+  S   LP +P ERF  LF  R +WE ++++PYI 
Sbjct: 286 EETIQYLSEEDLPTDPKERFKELFELRKRWELEEIEPYIE 325

This family of proteins includes members ranging in size from approximately 300 to 460 residues. There are a number of well-conserved domains along the length. Length = 325

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	397
PF09724	325	DUF2036: Uncharacterized conserved protein (DUF203	100.0
KOG0798	380	consensus Uncharacterized conserved protein [Cell	100.0

>PF09724 DUF2036: Uncharacterized conserved protein (DUF2036); InterPro: IPR019128 Sister chromatid cohesion protein DCC1 is a component of the RFC-like complex CTF18-RFC

Probab=100.00  E-value=2.9e-80  Score=611.81  Aligned_cols=319  Identities=37%  Similarity=0.700  Sum_probs=283.0

Q ss_pred             ceEEEecChHHHHHhhcC-ceEEecCCCCCeEEecCCCeEEEEEecccceeEecCCCCCCCcccccccCCCCCCCcccce
Q 015967           36 DLILLELDEKLLSDVLYQ-RVSLRGQPDEDAVLCTQSKTFAIKFVGTSNSVFLIPPSDHSSFCEIADDCSGKNRNQQSIA  114 (397)
Q Consensus        36 ~ykLLEL~~eLL~~l~~g-~L~iKg~~~d~aVLCT~dkTy~irq~~tSNslLL~~~~~~~~~~~~~~~~~~~~~~~~~~~  114 (397)
                      +||||||||+||++|++| +|+|||.++++|||||++|||+|||++|||||||+++..++.... +.........+...+
T Consensus         1 ~ykLLEl~~~Ll~~l~~~~~L~iKg~~~~~aVLCT~~kTy~vrq~~~SNsllL~~~~~~~~~~~-~~~~~~~~~~~~~~~   79 (325)
T PF09724_consen    1 EYKLLELPPELLEALESGESLTIKGDPDDDAVLCTDDKTYSVRQVNTSNSLLLMPPCQPPDDSD-PNDDSSTNERTDPTL   79 (325)
T ss_pred             CcEEEECCHHHHHHHhCCCeEEEecCCCCceEEcCCCCcEEEEEeecCceeEEcCCCCCccccc-ccccccccccccCce
Confidence            599999999999999998 899999999999999999999999999999999998865443210 000000111234467


Q ss_pred             eEEeeecceeEEEeccccHHHHHhhhhcCCCCChhhhhhhhhHHHhhhcCCCCCHHHHHHHcccCHHHHHHHhhhcCeEE
Q 015967          115 SVIKVAPGNMELVEVAPRIDKLKLLLSENPYSSEEALEFEDLEEMEKSKAGLYTWNDLVDKVQASDDELRSGLWALSAVE  194 (397)
Q Consensus       115 ~v~~~~~~~lEL~~~~p~l~~L~~lL~~~pY~g~~~e~~~~~~~~~~~~~~~~t~~eL~~~vqaS~~El~~~l~~l~a~e  194 (397)
                      .+++.++++|||++++|++++|+.+|+..+|+|++.+...      ......||+++|++++|||++||.++|.+++||+
T Consensus        80 ~~~~~~~~~~El~~~~p~l~~L~~ll~~~~y~g~~~e~~~------~~~~~~~t~~~L~~~vq~S~~El~~~l~~l~~~e  153 (325)
T PF09724_consen   80 VVIASCSSYLELRPIAPRLNKLRELLRLPPYDGEEDEESN------DGNKSDYTLDELLDNVQASEAELRQALKELGACE  153 (325)
T ss_pred             EEEEEeccEEEEEecCCcHHHHHHHhcCCcccCCcccccc------ccccccccHHHHHHhCCccHHHHHHHHHHCCEEE
Confidence            8889999999999999999999999999999998753211      1123459999999999999999999999999999


Q ss_pred             ECCEEEEeChHHHHHHHHHHHHHHhhCCCCCCCcCHHHHHHHhhcCCCcHHHHHHHHHHhCccccCCCCcceeeecChhh
Q 015967          195 LGGYWRIVDERYMGTVLAMLLHNSVLNDWSLDALIEDEVVNVLVSDGFPPILASHCLRVYGSKVDENRSKSCLWKLDEKR  274 (397)
Q Consensus       195 i~G~~r~Ls~~y~~~~L~~il~~~~~~~~~l~~~~~~~~~~~l~~~~~p~~vi~~vl~~~~~~~~~~~g~~~~~~Ld~~k  274 (397)
                      |||+||+||++|+.++|+.||+.+++++|+++.++++++++++.+++||++|++|||++||+..++++ .  +|+||++|
T Consensus       154 i~G~~r~Ls~~~~~~~L~~il~~~~~~~~~~~~~~~~~~~~~l~~~~~p~~v~~~vl~~~~~~~~~~~-~--~~~Ld~~k  230 (325)
T PF09724_consen  154 IDGYWRLLSPSYLFEILDLILTSAVEESWDLDQFPVEEVVEALEEDEYPREVVEHVLRKFGTREDDDD-S--WWKLDEDK  230 (325)
T ss_pred             ECCEEEECCHHHHHHHHHHHHHHHHHcCCCcccCCHHHHHHHhcccCCCHHHHHHHHHHhCCCccCCC-c--eEEcCHHH
Confidence            99999999999999999999999999999999999999999999889999999999999998876532 2  29999999


Q ss_pred             HHHHHHHHHhhc-C--CCCHHHHHHHHHHhCCC--CcccccccceeeEEeeecCCcceEEEecCCCCCcCHHHHHHHHHc
Q 015967          275 VCVHFAREILSS-G--RRKMESFMEEWQRKIPE--GMQASFEILEGEVLTERLGVDLWIRAFSVSSLPANPAERFSILFG  349 (397)
Q Consensus       275 I~r~~a~~lL~~-~--~~~l~eFl~~Wk~~vP~--~~~~~l~~L~G~~l~~~~~~~~~I~y~~~~~LP~dp~~Rf~~LF~  349 (397)
                      ||||+|+++|++ .  +|+++|||++||+++|+  ++++++++|+|+|+++..+.+++|+|||+++||.||++||++||+
T Consensus       231 i~~~~a~~lL~~~~~~~~~~~eFl~~Wk~~lP~~~~~~~~l~~L~G~~~~~~~~~~~~I~y~~~~~Lp~dp~~Rf~~LF~  310 (325)
T PF09724_consen  231 ICRWFAIQLLKAHASSSFPLDEFLEAWKSSLPEFFGMDPDLEMLRGLALIDDRPSPTTIQYFPESDLPTDPKERFKELFK  310 (325)
T ss_pred             HHHHHHHHHHHhcccCCCCHHHHHHHHHHhCCCcCCCCCCHHHhCCeeEeecCCCCCEEEEecHHHCCCCHHHHHHHHHh
Confidence            999999999998 4  79999999999999999  667899999999999877899999999999999999999999999


Q ss_pred             CCCCCChhhhhhhhh
Q 015967          350 ERPKWEWKDLQPYIR  364 (397)
Q Consensus       350 ~~~kW~~~Ei~Pyi~  364 (397)
                      +|++|+++||+|||+
T Consensus       311 ~~~kW~~~ei~Pyi~  325 (325)
T PF09724_consen  311 LRPKWTLDEIEPYIE  325 (325)
T ss_pred             cCCCCCHHHHHHhhC
Confidence            999999999999996

This complex is required for the efficient establishment of chromosome cohesion during S-phase and may load or unload POL30/PCNA. During a clamp loading circle, the RFC:clamp complex binds to DNA and the recognition of the double-stranded/single-stranded junction stimulates ATP hydrolysis by RFC. The complex presumably provides bipartite ATP sites in which one subunit supplies a catalytic site for hydrolysis of ATP bound to the neighbouring subunit. Dissociation of RFC from the clamp leaves the clamp encircling DNA [, ].

>KOG0798 consensus Uncharacterized conserved protein [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=3.8e-80  Score=592.49  Aligned_cols=368  Identities=35%  Similarity=0.532  Sum_probs=325.0

Q ss_pred             CchhhhhccCCCC----ceeEEecCCCCC-CCceEEEecChHHHHHhhcC-ceEEecCCCCCeEEecCCCeEEEEEeccc
Q 015967            9 RDAEAVLNLQQNS----SISIAYHPLFGP-NDDLILLELDEKLLSDVLYQ-RVSLRGQPDEDAVLCTQSKTFAIKFVGTS   82 (397)
Q Consensus         9 ~~~~~~~~~~~~~----~~~l~f~~~~~~-~~~ykLLEL~~eLL~~l~~g-~L~iKg~~~d~aVLCT~dkTy~irq~~tS   82 (397)
                      +++.+.-.|.+|+    .+.+.|+|+|++ .+.|.||++++++++++++| +|+|||+++++|||||+||||.||++++|
T Consensus         5 ~a~~~~~~L~~~~~~~~~~~l~f~P~~~~~s~~~~LLeld~~~i~~~~eg~~L~fkgd~de~aVLCT~dkTy~vK~~~~S   84 (380)
T KOG0798|consen    5 DAQFTFAKLEANELLPRSILLKFPPEYSDISSEFLLLELDDDLIQQLEEGHSLVFKGDFDEDAVLCTDDKTYAVKQVEQS   84 (380)
T ss_pred             hhhhhhhhhhhcccchhhhcccCCCccccchhhhhhhcccHHHhhchhcCceEEEecCCccceEEecCCceeeeeeeccc
Confidence            5677888889888    557888888865 89999999999999999999 89999999999999999999999999999


Q ss_pred             ceeEecCCCCCCCcccccccCCCCCCCcccceeEEeeecceeEEEeccccHHHHHhhhhcCCCCChhhhhhhhhHHHhhh
Q 015967           83 NSVFLIPPSDHSSFCEIADDCSGKNRNQQSIASVIKVAPGNMELVEVAPRIDKLKLLLSENPYSSEEALEFEDLEEMEKS  162 (397)
Q Consensus        83 NslLL~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~lEL~~~~p~l~~L~~lL~~~pY~g~~~e~~~~~~~~~~~  162 (397)
                      |||||++++.++++.   .+..+.+.+.. ...+.+  ..++|++++.|+|.+|+.+|.++||+|++.+-+       .+
T Consensus        85 Ns~LLip~~~~~~~~---~~~p~~~~~~~-~~~~f~--~~~~E~re~~p~l~klk~il~~~~~~~~e~~~e-------~~  151 (380)
T KOG0798|consen   85 NSVLLIPELKPADDV---LTDPDLSKNYI-DTKIFA--FLEFELREIYPRLFKLKKILYENELDWDEKEVE-------LE  151 (380)
T ss_pred             ceEEEecCCcCcccc---ccCcCCCCccc-cceeec--cceeeeeehhhhhhhhhhhhhcCCCCCcHHHhh-------hc
Confidence            999999998665432   11011111111 112222  238999999999999999999999999985321       11


Q ss_pred             cCCCCCHHHHHHHcccCHHHHHHHhhhcCeEEECCEEEEeChHHHHHHHHHHHHHHhhCCCCCCCcCHHHHHHHhhcCCC
Q 015967          163 KAGLYTWNDLVDKVQASDDELRSGLWALSAVELGGYWRIVDERYMGTVLAMLLHNSVLNDWSLDALIEDEVVNVLVSDGF  242 (397)
Q Consensus       163 ~~~~~t~~eL~~~vqaS~~El~~~l~~l~a~ei~G~~r~Ls~~y~~~~L~~il~~~~~~~~~l~~~~~~~~~~~l~~~~~  242 (397)
                      ....||++||++.||||++|++.+|++++||++||+||+||++|+.++|++|+..+++++|+++.++.+.++.++.++.|
T Consensus       152 ~~~~yT~~dLL~sVqaS~eE~~~~Lq~l~a~~~dG~~riLs~~Y~~~iL~~il~l~~~~~wsf~~v~~~~~v~~l~~dEF  231 (380)
T KOG0798|consen  152 SNSVYTLEDLLNSVQASREEVMSGLQKLFAIVKDGFLRILSPDYLCKILNMILVLADEESWSFDEVDLKELVNALKDDEF  231 (380)
T ss_pred             ccccccHHHHHHhccccHHHHHHHHHhcCcEeecCEEEEecHHHHHHHHHHHHHHhhhhcccccchhHHHHhhccccccC
Confidence            22339999999999999999999999999999999999999999999999999999999999999999999999998889


Q ss_pred             cHHHHHHHHHHhCccccCCCCcceeeecChhhHHHHHHHHHhhc-CCCCHHHHHHHHHHhCCCCcccccccceeeEEeee
Q 015967          243 PPILASHCLRVYGSKVDENRSKSCLWKLDEKRVCVHFAREILSS-GRRKMESFMEEWQRKIPEGMQASFEILEGEVLTER  321 (397)
Q Consensus       243 p~~vi~~vl~~~~~~~~~~~g~~~~~~Ld~~kI~r~~a~~lL~~-~~~~l~eFl~~Wk~~vP~~~~~~l~~L~G~~l~~~  321 (397)
                      |++++.|||++||.+.+..+++   |+|++..||||+|+++|+. .+++++|||+.||+.+|+||+|++++|+|.+++++
T Consensus       232 pe~~v~~vl~~f~~k~n~~~~k---f~l~~~li~r~~ar~iL~~~~~~~l~eF~e~W~~~lP~gm~~~~~~L~gl~l~~k  308 (380)
T KOG0798|consen  232 PEDSVEHVLRSFGIKDNEEPKK---FRLDEELICRWYARQILRGIVSFSLDEFMELWKKRLPYGMPCDIKQLEGLGLLDK  308 (380)
T ss_pred             cHHHHHHHHHHhcccccCCCCc---cccCHHHHHHHHHHHHHHHHhcccHHHHHHHHHHhCCCCCCcChhhccccccccc
Confidence            9999999999999877665533   9999999999999999998 67999999999999999999999999999999999


Q ss_pred             cCCcceEEEecCCCCCcCHHHHHHHHHcCCCCCChhhhhhhhhccCCCCCChhHHHHhhhhccCcCCCCCccc
Q 015967          322 LGVDLWIRAFSVSSLPANPAERFSILFGERPKWEWKDLQPYIRDLKVPGQSLEGLLLKYTRRTQPTLDAEPVY  394 (397)
Q Consensus       322 ~~~~~~I~y~~~~~LP~dp~~Rf~~LF~~~~kW~~~Ei~Pyi~~l~~~~~~~d~lllKyaR~~~~~~d~~~~y  394 (397)
                      .|.+++|+|+.+++||++|++||+.||++|++|++++|+|||++++..|.+++.+++||||..|.  .+.+||
T Consensus       309 ~~~~~~i~~la~~~LP~~pkeRf~~LF~~r~~W~~edl~Pyi~~l~~~~~~~~~~v~~~~~~~r~--~~~k~~  379 (380)
T KOG0798|consen  309 GPFSKLILYLAVEDLPTTPKERFSVLFELRSRWTMEDLEPYIEDLSRNGYMIDFGVSKYIRPCRN--QELKVL  379 (380)
T ss_pred             CCcchhhhhhhHhhcCCCHHHHHHHHHHHHhhhhHHHhhHHHHHHhhcchhhhhHHHHHhHHHHh--ccceec
Confidence            99999999999999999999999999999999999999999999999999999999999999995  344444

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	397
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-06

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 49.5 bits (117), Expect = 1e-06
 Identities = 48/312 (15%), Positives = 96/312 (30%), Gaps = 94/312 (30%)

Query: 151 LEFEDLEEMEKSKAGLYTWNDLVDKVQASDDELRSG--LWALSAVELGGYWRIVDERYMG 208
            + +D+++M KS   + +  ++   + + D    +    W L + +         ++++ 
Sbjct: 33  FDCKDVQDMPKS---ILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMV-----QKFVE 84

Query: 209 TVLAM---LLHNSV---LNDWSLDALIEDEVVNVLVSDG--FPPILASHCLRVYGSKVDE 260
            VL +    L + +       S+   +  E  + L +D   F      +  R+      +
Sbjct: 85  EVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKY---NVSRL--QPYLK 139

Query: 261 NRSKSCLWKL-DEKRVCVH---------FAREILSSGRRKMESFMEE---W----QRKIP 303
            R    L +L   K V +           A ++  S   K++  M+    W        P
Sbjct: 140 LR--QALLELRPAKNVLIDGVLGSGKTWVALDVCLS--YKVQCKMDFKIFWLNLKNCNSP 195

Query: 304 EGMQASFEILEGEVLTERLGVDLWIRAFSVSSLPANP---AERFSILFGERP-------- 352
           E +    E+L+   L  ++  +   R+   S++             L   +P        
Sbjct: 196 ETV---LEMLQK--LLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVL 250

Query: 353 -----KWEWK--DLQPYI----RDLKV----------------------PGQSLEGLLLK 379
                   W   +L   I    R  +V                      P +    LLLK
Sbjct: 251 LNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKS-LLLK 309

Query: 380 YTRRTQPTLDAE 391
           Y       L  E
Sbjct: 310 YLDCRPQDLPRE 321

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00