Citrus Sinensis ID: 021929

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-----
MSLSGPLKITYHSPEEEIAFGPGCWLWDYLRRSGASGFLLPLSGGADSSSVAAIVGCMCQLVVKEIANGDEQVKADAIRIGRYANGEFPTESREFAKRIFYTVFMGSENSSQETRMRAKKLADEIGSWHLDVSIDTVVSAFLSLFQTLTGKRPRYKLDEVDMGMTYEELSVYGRLRKIFHCGPVSMFKNLCYRWGARLTPSEVAEKVKHFFKYYSINRHKMTVLTPSYHAESYSPEDNRFDLRQFLYNARWPYQFRKIDELVKELDGEKVPFSESSDHEKMGTTSDGGGGMGVIAAGSGNPKAGH
cccccccccccccHHHHHHHccHHHHHHHHHHHccccEEEEccccHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHccccccccccHHHHHHHHHccccccccccHHHHHHHHHHHHHHHccccEEEcHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHccEEEEccccccccccccccccccccccccHHHHHHHHHccccccccccHHHHHHccccccccccccccHHccccccccccHHHHcccccccccccc
ccccccccccEcccHHHHHccHHHHHHHHHHHcccccEEEEccccccHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHccccccccccHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHccccEEEcccccccHHHHHHHHHHHHHHHHHHcccHHHHHccccccccccHHHHHHHHHHHHHEEEHccccccEccHHHHHccccccccccccccccccccccHHHHHHHHHHHHHHHHcccccccccHHHccccccccccccEEEcccccccccc
mslsgplkityhspeeeiafgpgcwlWDYLrrsgasgfllplsggadsssVAAIVGCMCQLVVKEIANGDEQVKADAIRigryangefptesREFAKRIFYTVFmgsenssqETRMRAKKLADEIGSWHLDVSIDTVVSAFLSLFQTLtgkrprykldevdmgmtYEELSVYGRLRKifhcgpvsmfknlcyrwgarltpsEVAEKVKHFFKYYSInrhkmtvltpsyhaesyspednrFDLRQFLYnarwpyqfRKIDELVKEldgekvpfsessdhekmgttsdggggmgviaagsgnpkagh
mslsgplkityhspeeeIAFGPGCWLWDYLRRSGASGFLLPLSGGADSSSVAAIVGCMCQLVVKEIANGDEQVKADAIRIGryangefptesreFAKRIFYTVfmgsenssqeTRMRAKKLADEIGSWHLDVSIDTVVSAFLSLFqtltgkrprykldevdmGMTYEELSVYGRLRKIFHCGPVSMFKNLCYRWGARLTPSEVAEKVKHFFKYYSINRHKMTVLTPSYHAESYSPEDNRFDLRQFLYNARWPYQFRKIDELVKELDGEkvpfsessdhekmgttsdggggmGVIAAgsgnpkagh
MSLSGPLKITYHSPEEEIAFGPGCWLWDYLRRSGASGFLLPLSGGADSSSVAAIVGCMCQLVVKEIANGDEQVKADAIRIGRYANGEFPTESREFAKRIFYTVFMGSENSSQETRMRAKKLADEIGSWHLDVSIDTVVSAFLSLFQTLTGKRPRYKLDEVDMGMTYEELSVYGRLRKIFHCGPVSMFKNLCYRWGARLTPSEVAEKVKHFFKYYSINRHKMTVLTPSYHAESYSPEDNRFDLRQFLYNARWPYQFRKIDELVKELDGEKVPFSESSDHEKmgttsdggggmgviaagsgNPKAGH
***************EEIAFGPGCWLWDYLRRSGASGFLLPLSGGADSSSVAAIVGCMCQLVVKEIANGDEQVKADAIRIGRYANGEFPTESREFAKRIFYTVFMG**************LADEIGSWHLDVSIDTVVSAFLSLFQTLTGKRPRYKLDEVDMGMTYEELSVYGRLRKIFHCGPVSMFKNLCYRWGARLTPSEVAEKVKHFFKYYSINRHKMTVLTPSYHAESYSPEDNRFDLRQFLYNARWPYQFRKIDELVKE*****************************************
***SGPLKITYHSPEEEIAFGPGCWLWDYLRRSGASGFLLPLSGGADSSSVAAIVGCMCQLVVKEIANGDEQVKADAIRIGRYANGEFPTESREFAKRIFYTVFMGS**********AKKLADEIGSWHLDVSIDTVVSAFLSLFQTLTGKRPRYKLDEVDMGMTYEELSVYGRLRKIFHCGPVSMFKNLCYRWGARLTPSEVAEKVKHFFKYYSINRHKMTVLTPSYHAESYSPEDNRFDLRQFLYNARWPYQFRKIDELVKELD**********DHEKMGTTSDGGGGMGVIAA*********
MSLSGPLKITYHSPEEEIAFGPGCWLWDYLRRSGASGFLLPLSGGADSSSVAAIVGCMCQLVVKEIANGDEQVKADAIRIGRYANGEFPTESREFAKRIFYTVFMGS*************LADEIGSWHLDVSIDTVVSAFLSLFQTLTGKRPRYKLDEVDMGMTYEELSVYGRLRKIFHCGPVSMFKNLCYRWGARLTPSEVAEKVKHFFKYYSINRHKMTVLTPSYHAESYSPEDNRFDLRQFLYNARWPYQFRKIDELVKELDGEKVPFSESSDHEKMGTTSDGGGGMGVIAAGSGNPKAGH
***SGPLKITYHSPEEEIAFGPGCWLWDYLRRSGASGFLLPLSGGADSSSVAAIVGCMCQLVVKEIANGDEQVKADAIRIGRYANGEFPTESREFAKRIFYTVFMGSENSSQETRMRAKKLADEIGSWHLDVSIDTVVSAFLSLFQTLTGKRPRYKLDEVDMGMTYEELSVYGRLRKIFHCGPVSMFKNLCYRWGARLTPSEVAEKVKHFFKYYSINRHKMTVLTPSYHAESYSPEDNRFDLRQFLYNARWPYQFRKIDELVKELDGEK************************************
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MSLSGPLKITYHSPEEEIAFGPGCWLWDYLRRSGASGFLLPLSGGADSSSVAAIVGCMCQLVVKEIANGDEQVKADAIRIGRYANGEFPTESREFAKRIFYTVFMGSENSSQETRMRAKKLADEIGSWHLDVSIDTVVSAFLSLFQTLTGKRPRYKLDEVDMGMTYEELSVYGRLRKIFHCGPVSMFKNLCYRWGARLTPSEVAEKVKHFFKYYSINRHKMTVLTPSYHAESYSPEDNRFDLRQFLYNARWPYQFRKIDELVKELDGEKVPFSESSDHEKMGTTSDGGGGMGVIAAGSGNPKAGH
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query305 2.2.26 [Sep-21-2011]
Q54ML1713 Glutamine-dependent NAD(+ yes no 0.488 0.208 0.533 1e-44
P38795714 Glutamine-dependent NAD(+ yes no 0.481 0.205 0.537 1e-43
Q5ZMA6707 Glutamine-dependent NAD(+ yes no 0.495 0.213 0.519 4e-42
Q9VYA0 787 Probable glutamine-depend yes no 0.488 0.189 0.506 5e-40
O74940700 Putative glutamine-depend yes no 0.488 0.212 0.512 1e-39
Q711T7 725 Glutamine-dependent NAD(+ yes no 0.498 0.209 0.509 1e-39
Q812E8725 Glutamine-dependent NAD(+ yes no 0.360 0.151 0.648 4e-38
Q3ZBF0706 Glutamine-dependent NAD(+ yes no 0.350 0.151 0.640 6e-38
Q6IA69706 Glutamine-dependent NAD(+ yes no 0.498 0.215 0.470 2e-36
Q4R5Y2706 Glutamine-dependent NAD(+ N/A no 0.360 0.155 0.630 1e-35
>sp|Q54ML1|NADE_DICDI Glutamine-dependent NAD(+) synthetase OS=Dictyostelium discoideum GN=nadsyn1 PE=3 SV=1 Back     alignment and function desciption
 Score =  180 bits (456), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 80/150 (53%), Positives = 111/150 (74%)

Query: 7   LKITYHSPEEEIAFGPGCWLWDYLRRSGASGFLLPLSGGADSSSVAAIVGCMCQLVVKEI 66
           + I Y++P EEI FGP CWLWDYLRRSG SG+ LPLSGGADS++ AAI+G MCQLV+ ++
Sbjct: 320 IHINYNTPAEEIGFGPACWLWDYLRRSGLSGYFLPLSGGADSAATAAIIGIMCQLVILDV 379

Query: 67  ANGDEQVKADAIRIGRYANGEFPTESREFAKRIFYTVFMGSENSSQETRMRAKKLADEIG 126
           + G++QV  DA RI        PT+SREFA R+F+T ++GS+NSS+ETR RA ++A +IG
Sbjct: 380 SKGNKQVLKDAQRITNSPEDYIPTDSREFASRLFFTAYLGSKNSSKETRDRAMEIAKDIG 439

Query: 127 SWHLDVSIDTVVSAFLSLFQTLTGKRPRYK 156
           S H +V ID +  +F   F  +T K+P+++
Sbjct: 440 SVHKEVDIDDISQSFNDAFSQITKKQPQFR 469

Dictyostelium discoideum (taxid: 44689)
EC: 6EC: .EC: 3EC: .EC: 5EC: .EC: 1
>sp|P38795|NADE_YEAST Glutamine-dependent NAD(+) synthetase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=QNS1 PE=1 SV=1 Back     alignment and function description
>sp|Q5ZMA6|NADE_CHICK Glutamine-dependent NAD(+) synthetase OS=Gallus gallus GN=NADSYN1 PE=2 SV=1 Back     alignment and function description
>sp|Q9VYA0|NADE_DROME Probable glutamine-dependent NAD(+) synthetase OS=Drosophila melanogaster GN=CG9940 PE=1 SV=1 Back     alignment and function description
>sp|O74940|NADE_SCHPO Putative glutamine-dependent NAD(+) synthetase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC553.02 PE=3 SV=1 Back     alignment and function description
>sp|Q711T7|NADE_MOUSE Glutamine-dependent NAD(+) synthetase OS=Mus musculus GN=Nadsyn1 PE=2 SV=1 Back     alignment and function description
>sp|Q812E8|NADE_RAT Glutamine-dependent NAD(+) synthetase OS=Rattus norvegicus GN=Nadsyn1 PE=2 SV=1 Back     alignment and function description
>sp|Q3ZBF0|NADE_BOVIN Glutamine-dependent NAD(+) synthetase OS=Bos taurus GN=NADSYN1 PE=2 SV=1 Back     alignment and function description
>sp|Q6IA69|NADE_HUMAN Glutamine-dependent NAD(+) synthetase OS=Homo sapiens GN=NADSYN1 PE=1 SV=3 Back     alignment and function description
>sp|Q4R5Y2|NADE_MACFA Glutamine-dependent NAD(+) synthetase OS=Macaca fascicularis GN=NADSYN1 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query305
224053749 730 predicted protein [Populus trichocarpa] 0.577 0.241 0.807 1e-78
356513255 731 PREDICTED: glutamine-dependent NAD(+) sy 0.570 0.238 0.822 3e-78
356523661 731 PREDICTED: glutamine-dependent NAD(+) sy 0.570 0.238 0.822 1e-77
449524932 720 PREDICTED: LOW QUALITY PROTEIN: glutamin 0.577 0.244 0.796 1e-76
449452230 720 PREDICTED: glutamine-dependent NAD(+) sy 0.577 0.244 0.796 2e-76
255555661 665 glutamine-dependent NAD(+) synthetase, p 0.498 0.228 0.854 3e-76
225426228 724 PREDICTED: glutamine-dependent NAD(+) sy 0.577 0.243 0.774 6e-76
224075164 730 predicted protein [Populus trichocarpa] 0.577 0.241 0.791 8e-76
297847854 725 carbon-nitrogen hydrolase family protein 0.577 0.242 0.774 1e-75
15221990 725 NAD synthetase [Arabidopsis thaliana] gi 0.577 0.242 0.769 3e-75
>gi|224053749|ref|XP_002297960.1| predicted protein [Populus trichocarpa] gi|222845218|gb|EEE82765.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  298 bits (764), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 147/182 (80%), Positives = 159/182 (87%), Gaps = 6/182 (3%)

Query: 1   MSLSGPLKITYHSPEEEIAFGPGCWLWDYLRRSGASGFLLPLSGGADSSSVAAIVGCMCQ 60
           MSLS PLKI YHSPEEEIAFGPGCWLWDYLRRSGASGFLLPLSGGADSSSVAAIVGCMCQ
Sbjct: 314 MSLSSPLKINYHSPEEEIAFGPGCWLWDYLRRSGASGFLLPLSGGADSSSVAAIVGCMCQ 373

Query: 61  LVVKEIANGDEQVKADAIRIGRYANGEFPTESREFAKRIFYTVFMGSENSSQETRMRAKK 120
           LVVKEI NGDEQVKADAIRIG Y +G+FPT+S+EFAKRIFYTVFMGSENSS++T+ RAK+
Sbjct: 374 LVVKEIDNGDEQVKADAIRIGNYTDGQFPTDSKEFAKRIFYTVFMGSENSSEDTKKRAKE 433

Query: 121 LADEIGSWHLDVSIDTVVSAFLSLFQTLTGKRPRYKLDEVDMGMTYEEL---SVYGRLRK 177
           LADEIGSWHLDVSID VVSA LSLFQTLTGKRPRYK   VD G   E L   ++  R+R 
Sbjct: 434 LADEIGSWHLDVSIDGVVSALLSLFQTLTGKRPRYK---VDGGSNIENLGLQNIQARIRM 490

Query: 178 IF 179
           + 
Sbjct: 491 VL 492

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|356513255|ref|XP_003525329.1| PREDICTED: glutamine-dependent NAD(+) synthetase-like [Glycine max] Back     alignment and taxonomy information
>gi|356523661|ref|XP_003530455.1| PREDICTED: glutamine-dependent NAD(+) synthetase-like [Glycine max] Back     alignment and taxonomy information
>gi|449524932|ref|XP_004169475.1| PREDICTED: LOW QUALITY PROTEIN: glutamine-dependent NAD(+) synthetase-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449452230|ref|XP_004143863.1| PREDICTED: glutamine-dependent NAD(+) synthetase-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|255555661|ref|XP_002518866.1| glutamine-dependent NAD(+) synthetase, putative [Ricinus communis] gi|223541853|gb|EEF43399.1| glutamine-dependent NAD(+) synthetase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|225426228|ref|XP_002263774.1| PREDICTED: glutamine-dependent NAD(+) synthetase [Vitis vinifera] gi|297742398|emb|CBI34547.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|224075164|ref|XP_002304569.1| predicted protein [Populus trichocarpa] gi|222842001|gb|EEE79548.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|297847854|ref|XP_002891808.1| carbon-nitrogen hydrolase family protein [Arabidopsis lyrata subsp. lyrata] gi|297337650|gb|EFH68067.1| carbon-nitrogen hydrolase family protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|15221990|ref|NP_175906.1| NAD synthetase [Arabidopsis thaliana] gi|12321572|gb|AAG50835.1|AC073944_2 hypothetical protein [Arabidopsis thaliana] gi|38564264|gb|AAR23711.1| At1g55090 [Arabidopsis thaliana] gi|110736541|dbj|BAF00237.1| hypothetical protein [Arabidopsis thaliana] gi|332195063|gb|AEE33184.1| NAD synthetase [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query305
TAIR|locus:2205667 725 AT1G55090 [Arabidopsis thalian 0.573 0.241 0.773 4.3e-128
DICTYBASE|DDB_G0285877713 nadsyn1 "glutamine-dependent N 0.491 0.210 0.533 3.1e-81
SGD|S000001116714 QNS1 "Glutamine-dependent NAD( 0.481 0.205 0.537 1.1e-79
UNIPROTKB|Q5ZMA6707 NADSYN1 "Glutamine-dependent N 0.495 0.213 0.519 4.3e-78
UNIPROTKB|F1P4D3707 NADSYN1 "Glutamine-dependent N 0.495 0.213 0.519 9e-78
POMBASE|SPCC553.02700 SPCC553.02 "glutamine-dependen 0.488 0.212 0.519 1.9e-76
CGD|CAL0004651714 orf19.1460 [Candida albicans ( 0.498 0.212 0.551 3.3e-76
UNIPROTKB|Q5ALW6714 CaO19.1460 "Putative uncharact 0.498 0.212 0.551 3.3e-76
MGI|MGI:1926164 725 Nadsyn1 "NAD synthetase 1" [Mu 0.563 0.237 0.469 4.9e-74
FB|FBgn0030512 787 CG9940 [Drosophila melanogaste 0.488 0.189 0.506 1e-73
TAIR|locus:2205667 AT1G55090 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 716 (257.1 bits), Expect = 4.3e-128, Sum P(2) = 4.3e-128
 Identities = 140/181 (77%), Positives = 156/181 (86%)

Query:     1 MSLSGPLKITYHSPEEEIAFGPGCWLWDYLRRSGASGFLLPLSGGADSSSVAAIVGCMCQ 60
             M+LS P KI YHSP+EEIAFGP CW+WDYLRRSGASGFLLPLSGGADSSSVAAIVGCMCQ
Sbjct:   314 MTLSSPKKIIYHSPQEEIAFGPACWMWDYLRRSGASGFLLPLSGGADSSSVAAIVGCMCQ 373

Query:    61 LVVKEIANGDEQVKADAIRIGRYANGEFPTESREFAKRIFYTVFMGSENSSQETRMRAKK 120
             LVVKEIA GDEQVKADA RIG YANG+FPT+S+EFAKRIFYTVFMGSENSS+ET+ R+K+
Sbjct:   374 LVVKEIAKGDEQVKADANRIGNYANGQFPTDSKEFAKRIFYTVFMGSENSSEETKRRSKQ 433

Query:   121 LADEIGSWHLDVSIDTVVSAFLSLFQTLTGKRPRYKLDEVDMGMTYEEL---SVYGRLRK 177
             LADEIG+WHLDV ID VVSA LSLFQT+TGKRPRYK   VD G   E L   ++  R+R 
Sbjct:   434 LADEIGAWHLDVCIDGVVSAVLSLFQTVTGKRPRYK---VDGGSNAENLGLQNIQARMRM 490

Query:   178 I 178
             +
Sbjct:   491 V 491
GO:0003952 "NAD+ synthase (glutamine-hydrolyzing) activity" evidence=IEA
GO:0005524 "ATP binding" evidence=IEA
GO:0006807 "nitrogen compound metabolic process" evidence=IEA;ISS
GO:0009435 "NAD biosynthetic process" evidence=IEA
GO:0016810 "hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds" evidence=IEA;ISS
GO:0005829 "cytosol" evidence=IDA
GO:0046686 "response to cadmium ion" evidence=RCA
DICTYBASE|DDB_G0285877 nadsyn1 "glutamine-dependent NAD(+) synthetase" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
SGD|S000001116 QNS1 "Glutamine-dependent NAD(+) synthetase" [Saccharomyces cerevisiae (taxid:4932)] Back     alignment and assigned GO terms
UNIPROTKB|Q5ZMA6 NADSYN1 "Glutamine-dependent NAD(+) synthetase" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|F1P4D3 NADSYN1 "Glutamine-dependent NAD(+) synthetase" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
POMBASE|SPCC553.02 SPCC553.02 "glutamine-dependent NAD(+) synthetase (predicted)" [Schizosaccharomyces pombe (taxid:4896)] Back     alignment and assigned GO terms
CGD|CAL0004651 orf19.1460 [Candida albicans (taxid:5476)] Back     alignment and assigned GO terms
UNIPROTKB|Q5ALW6 CaO19.1460 "Putative uncharacterized protein" [Candida albicans SC5314 (taxid:237561)] Back     alignment and assigned GO terms
MGI|MGI:1926164 Nadsyn1 "NAD synthetase 1" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
FB|FBgn0030512 CG9940 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
fgenesh4_pg.C_LG_I000769
NAD+ synthase (glutamine-hydrolysing) (EC-6.3.5.1) (730 aa)
(Populus trichocarpa)
Predicted Functional Partners:
fgenesh4_pm.C_scaffold_308000002
nicotinamide-nucleotide adenylyltransferase/nicotinate-nucleotide adenylyltransferase (EC-2.7.7 [...] (247 aa)
     •• 0.917
gw1.XIII.983.1
nicotinamide-nucleotide adenylyltransferase/nicotinate-nucleotide adenylyltransferase (EC-2.7.7 [...] (237 aa)
     •• 0.916
gw1.70.673.1
nicotinamide-nucleotide adenylyltransferase/nicotinate-nucleotide adenylyltransferase (EC-2.7.7 [...] (237 aa)
     •• 0.916
gw1.IX.3597.1
NADH kinase/NAD kinase (EC-2.7.1.86) (520 aa)
     •  0.910
gw1.I.1484.1
NADH kinase/NAD kinase (EC-2.7.1.86) (520 aa)
     •  0.909
grail3.0151001701
hypothetical protein (395 aa)
     •  0.899
fgenesh4_pg.C_scaffold_145000062
hypothetical protein (414 aa)
     •  0.899

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query305
PLN02339700 PLN02339, PLN02339, NAD+ synthase (glutamine-hydro 1e-108
PLN02339700 PLN02339, PLN02339, NAD+ synthase (glutamine-hydro 2e-85
cd00553248 cd00553, NAD_synthase, NAD+ synthase is a homodime 1e-27
cd00553248 cd00553, NAD_synthase, NAD+ synthase is a homodime 3e-12
pfam02540242 pfam02540, NAD_synthase, NAD synthase 3e-09
TIGR00552250 TIGR00552, nadE, NAD+ synthetase 5e-06
COG0171268 COG0171, NadE, NAD synthase [Coenzyme metabolism] 9e-06
PRK00768268 PRK00768, nadE, NAD synthetase; Reviewed 2e-05
PRK13981540 PRK13981, PRK13981, NAD synthetase; Provisional 2e-04
PRK13980265 PRK13980, PRK13980, NAD synthetase; Provisional 2e-04
>gnl|CDD|177973 PLN02339, PLN02339, NAD+ synthase (glutamine-hydrolysing) Back     alignment and domain information 
 Score =  330 bits (848), Expect = e-108
 Identities = 136/171 (79%), Positives = 145/171 (84%), Gaps = 3/171 (1%)

Query: 1   MSLSGPLKITYHSPEEEIAFGPGCWLWDYLRRSGASGFLLPLSGGADSSSVAAIVGCMCQ 60
           +  S PLKI YHSPEEEIA GP CWLWDYLRRSGASGFLLPLSGGADSSSVAAIVG MCQ
Sbjct: 314 LVPSSPLKIRYHSPEEEIALGPACWLWDYLRRSGASGFLLPLSGGADSSSVAAIVGSMCQ 373

Query: 61  LVVKEIANGDEQVKADAIRIGRYANGEFPTESREFAKRIFYTVFMGSENSSQETRMRAKK 120
           LVVK I  GDEQVKADA RIG YA+GE PT+S+EFAKRIFYTV+MGSENSS+ETR RAK+
Sbjct: 374 LVVKAIREGDEQVKADARRIGNYADGEVPTDSKEFAKRIFYTVYMGSENSSEETRSRAKQ 433

Query: 121 LADEIGSWHLDVSIDTVVSAFLSLFQTLTGKRPRYKLDEVDMGMTYEELSV 171
           LADEIGS HLDV ID VVSA LSLFQTLTGKRPRYK   VD G   E L++
Sbjct: 434 LADEIGSSHLDVKIDGVVSAVLSLFQTLTGKRPRYK---VDGGSNAENLAL 481

Length = 700
>gnl|CDD|177973 PLN02339, PLN02339, NAD+ synthase (glutamine-hydrolysing) Back     alignment and domain information
>gnl|CDD|238309 cd00553, NAD_synthase, NAD+ synthase is a homodimer, which catalyzes the final step in de novo nicotinamide adenine dinucleotide (NAD+) biosynthesis, an amide transfer from either ammonia or glutamine to nicotinic acid adenine dinucleotide (NaAD) Back     alignment and domain information
>gnl|CDD|238309 cd00553, NAD_synthase, NAD+ synthase is a homodimer, which catalyzes the final step in de novo nicotinamide adenine dinucleotide (NAD+) biosynthesis, an amide transfer from either ammonia or glutamine to nicotinic acid adenine dinucleotide (NaAD) Back     alignment and domain information
>gnl|CDD|217093 pfam02540, NAD_synthase, NAD synthase Back     alignment and domain information
>gnl|CDD|233019 TIGR00552, nadE, NAD+ synthetase Back     alignment and domain information
>gnl|CDD|223249 COG0171, NadE, NAD synthase [Coenzyme metabolism] Back     alignment and domain information
>gnl|CDD|234831 PRK00768, nadE, NAD synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|237577 PRK13981, PRK13981, NAD synthetase; Provisional Back     alignment and domain information
>gnl|CDD|184435 PRK13980, PRK13980, NAD synthetase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 305
KOG2303706 consensus Predicted NAD synthase, contains CN hydr 100.0
PLN02339700 NAD+ synthase (glutamine-hydrolysing) 100.0
PRK02628679 nadE NAD synthetase; Reviewed 99.97
PF02540242 NAD_synthase: NAD synthase; InterPro: IPR022310 NA 99.96
PRK13981540 NAD synthetase; Provisional 99.95
PRK13980265 NAD synthetase; Provisional 99.95
cd00553248 NAD_synthase NAD+ synthase is a homodimer, which c 99.93
PRK00768268 nadE NAD synthetase; Reviewed 99.92
COG0171268 NadE NAD synthase [Coenzyme metabolism] 99.92
PTZ00323294 NAD+ synthase; Provisional 99.89
TIGR00552250 nadE NAD+ synthetase. NAD+ synthetase is a nearly 99.87
PRK00876326 nadE NAD synthetase; Reviewed 99.86
PF03054356 tRNA_Me_trans: tRNA methyl transferase; InterPro: 99.59
COG0482356 TrmU Predicted tRNA(5-methylaminomethyl-2-thiourid 99.52
PRK14665 360 mnmA tRNA-specific 2-thiouridylase MnmA; Provision 99.18
KOG2805 377 consensus tRNA (5-methylaminomethyl-2-thiouridylat 99.13
PRK14664 362 tRNA-specific 2-thiouridylase MnmA; Provisional 99.04
TIGR00420352 trmU tRNA (5-methylaminomethyl-2-thiouridylate)-me 99.03
cd01998349 tRNA_Me_trans tRNA methyl transferase. This family 99.01
PRK00143346 mnmA tRNA-specific 2-thiouridylase MnmA; Reviewed 98.99
TIGR00268252 conserved hypothetical protein TIGR00268. The N-te 98.92
PRK02628679 nadE NAD synthetase; Reviewed 98.85
PRK04527 400 argininosuccinate synthase; Provisional 98.83
COG1606269 ATP-utilizing enzymes of the PP-loop superfamily [ 98.82
PLN02347536 GMP synthetase 98.8
TIGR00884311 guaA_Cterm GMP synthase (glutamine-hydrolyzing), C 98.73
PRK00509 399 argininosuccinate synthase; Provisional 98.71
PRK13820 394 argininosuccinate synthase; Provisional 98.67
PRK00074511 guaA GMP synthase; Reviewed 98.62
TIGR00364201 exsB protein. This protein family is represented b 98.61
cd01990202 Alpha_ANH_like_I This is a subfamily of Adenine nu 98.59
PRK00919307 GMP synthase subunit B; Validated 98.56
cd01996154 Alpha_ANH_like_III This is a subfamily of Adenine 98.55
PF00733255 Asn_synthase: Asparagine synthase; InterPro: IPR00 98.53
cd01997295 GMP_synthase_C The C-terminal domain of GMP synthe 98.53
PRK11106231 queuosine biosynthesis protein QueC; Provisional 98.52
cd01991269 Asn_Synthase_B_C The C-terminal domain of Asparagi 98.44
TIGR03573343 WbuX N-acetyl sugar amidotransferase. This enzyme 98.44
COG0603222 Predicted PP-loop superfamily ATPase [General func 98.44
PF06508209 QueC: Queuosine biosynthesis protein QueC; InterPr 98.42
TIGR03108 628 eps_aminotran_1 exosortase 1 system-associated ami 98.41
PRK01565394 thiamine biosynthesis protein ThiI; Provisional 98.37
cd01993185 Alpha_ANH_like_II This is a subfamily of Adenine n 98.35
TIGR01536467 asn_synth_AEB asparagine synthase (glutamine-hydro 98.33
TIGR02432189 lysidine_TilS_N tRNA(Ile)-lysidine synthetase, N-t 98.27
PRK09431554 asnB asparagine synthetase B; Provisional 98.27
TIGR03104589 trio_amidotrans asparagine synthase family amidotr 98.21
cd01994194 Alpha_ANH_like_IV This is a subfamily of Adenine n 98.2
cd01713173 PAPS_reductase This domain is found in phosphoaden 98.2
PLN00200 404 argininosuccinate synthase; Provisional 98.13
TIGR00032 394 argG argininosuccinate synthase. argG in bacteria, 98.12
PTZ00077 586 asparagine synthetase-like protein; Provisional 98.1
PRK14561194 hypothetical protein; Provisional 98.09
cd01992185 PP-ATPase N-terminal domain of predicted ATPase of 98.08
COG0367542 AsnB Asparagine synthase (glutamine-hydrolyzing) [ 98.06
PRK08384381 thiamine biosynthesis protein ThiI; Provisional 98.05
PLN02549 578 asparagine synthase (glutamine-hydrolyzing) 98.05
cd01999 385 Argininosuccinate_Synthase Argininosuccinate synth 98.03
PRK08349198 hypothetical protein; Validated 98.02
TIGR00342371 thiazole biosynthesis/tRNA modification protein Th 98.02
KOG0571543 consensus Asparagine synthase (glutamine-hydrolyzi 98.01
PF01171182 ATP_bind_3: PP-loop family; InterPro: IPR011063 Th 97.92
cd01995169 ExsB ExsB is a transcription regulator related pro 97.91
PRK08576438 hypothetical protein; Provisional 97.87
cd01712177 ThiI ThiI is required for thiazole synthesis in th 97.85
TIGR03679218 arCOG00187 arCOG00187 universal archaeal metal-bin 97.74
PRK13795 636 hypothetical protein; Provisional 97.73
PRK10696258 tRNA 2-thiocytidine biosynthesis protein TtcA; Pro 97.69
COG0519315 GuaA GMP synthase, PP-ATPase domain/subunit [Nucle 97.63
PRK13794479 hypothetical protein; Provisional 97.59
PF02568197 ThiI: Thiamine biosynthesis protein (ThiI); InterP 97.43
COG0037298 MesJ tRNA(Ile)-lysidine synthase MesJ [Cell cycle 97.43
PF01507174 PAPS_reduct: Phosphoadenosine phosphosulfate reduc 97.36
PRK05253301 sulfate adenylyltransferase subunit 2; Provisional 97.36
PRK02090241 phosphoadenosine phosphosulfate reductase; Provisi 97.36
PRK10660 436 tilS tRNA(Ile)-lysidine synthetase; Provisional 97.27
PRK08557417 hypothetical protein; Provisional 97.24
cd01986103 Alpha_ANH_like Adenine nucleotide alpha hydrolases 97.19
PRK01269482 tRNA s(4)U8 sulfurtransferase; Provisional 97.16
TIGR00289222 conserved hypothetical protein TIGR00289. Homologo 97.15
COG2117198 Predicted subunit of tRNA(5-methylaminomethyl-2-th 96.99
PF00764 388 Arginosuc_synth: Arginosuccinate synthase; InterPr 96.85
PRK05370 447 argininosuccinate synthase; Validated 96.79
KOG1622552 consensus GMP synthase [Nucleotide transport and m 96.76
COG0137 403 ArgG Argininosuccinate synthase [Amino acid transp 96.73
COG1365255 Predicted ATPase (PP-loop superfamily) [General fu 96.44
COG0301383 ThiI Thiamine biosynthesis ATP pyrophosphatase [Co 96.22
TIGR00434212 cysH phosophoadenylyl-sulfate reductase (thioredox 96.18
TIGR02039294 CysD sulfate adenylyltransferase, small subunit. I 95.97
PRK12563312 sulfate adenylyltransferase subunit 2; Provisional 95.71
cd0198486 AANH_like Adenine nucleotide alpha hydrolases supe 95.46
TIGR02057226 PAPS_reductase phosphoadenosine phosphosulfate red 95.35
KOG1706 412 consensus Argininosuccinate synthase [Amino acid t 94.45
COG0175261 CysH 3'-phosphoadenosine 5'-phosphosulfate sulfotr 94.26
TIGR03183 447 DNA_S_dndC putative sulfurtransferase DndC. Member 93.14
PRK06850 507 hypothetical protein; Provisional 92.79
COG2102223 Predicted ATPases of PP-loop superfamily [General 92.01
TIGR00290223 MJ0570_dom MJ0570-related uncharacterized domain. 91.85
PF01902218 ATP_bind_4: ATP-binding region; InterPro: IPR00276 89.03
KOG0573520 consensus Asparagine synthase [Amino acid transpor 84.58
TIGR02026497 BchE magnesium-protoporphyrin IX monomethyl ester 81.31
>KOG2303 consensus Predicted NAD synthase, contains CN hydrolase domain [Coenzyme transport and metabolism; General function prediction only] Back     alignment and domain information 
Probab=100.00  E-value=2.1e-102  Score=763.04  Aligned_cols=270  Identities=64%  Similarity=1.085  Sum_probs=265.0

Q ss_pred             CCCCCcccccCCcHHHHHhcHHHHHHHHHHHhCCCceEEeccCchHHHHHHHHHHHhHHHHHHHHhcCchhHHHHHHHhh
Q 021929            2 SLSGPLKITYHSPEEEIAFGPGCWLWDYLRRSGASGFLLPLSGGADSSSVAAIVGCMCQLVVKEIANGDEQVKADAIRIG   81 (305)
Q Consensus         2 ~~~~~~~~~~~~peeEi~~~~a~~L~DyLrrsg~~g~~LgLSGGiDSs~tA~lv~~mc~~v~~a~~~g~~~v~~~~~~ig   81 (305)
                      .|+.|++|.||+|+|||+.||||||||||||||+.|||||||||+|||+||+||++||++|++|+++||+||+.|+++|.
T Consensus       316 ~~t~p~e~~~hsPeeEia~GPacwlWdyLRRs~~aGfflPLSGG~DSsatA~iV~sMC~~V~~av~~g~eqv~~Dvr~i~  395 (706)
T KOG2303|consen  316 TPTEPIEWKYHSPEEEIALGPACWLWDYLRRSGQAGFFLPLSGGVDSSATAAIVYSMCRQVCKAVQSGDEQVLADVRRIV  395 (706)
T ss_pred             CCCCCcccccCCcHHHhccCchHHHHHHHHhcCCCceEEecCCCccchHHHHHHHHHHHHHHHHHHcCchhhhhhhHHHh
Confidence            68999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCCCCCcchhhhcCCeEEEEEEcCCCCCHHHHHHHHHHHHHhCCcEEEEechHHHHHHHHHhhhhcCCCCccc-----
Q 021929           82 RYANGEFPTESREFAKRIFYTVFMGSENSSQETRMRAKKLADEIGSWHLDVSIDTVVSAFLSLFQTLTGKRPRYK-----  156 (305)
Q Consensus        82 ~~~~~~~p~~~~e~~~~~l~t~yM~t~nSs~et~~~A~~LA~~iGi~h~~i~Id~~v~a~~~~f~~~~g~~prfr-----  156 (305)
                      .+ .+|+|++|++|||++|+||||+++|||+||+.+|++||++||++|..++||.+|++++++|..+||++|+|+     
T Consensus       396 ~~-~~~~p~dp~~l~nri~~TcyMgSenSS~ETr~rak~La~~igs~H~~i~iD~~vsavl~lF~~vtGk~P~f~~~ggs  474 (706)
T KOG2303|consen  396 ND-ISYTPTDPADLCNRILYTCYMGSENSSKETRRRAKELANQIGSYHIDLNIDTAVSAVLSLFNLVTGKTPRFKSHGGS  474 (706)
T ss_pred             cC-CCcCCCCHHHHHHhhhhhheeccccccHHHHHHHHHHHHhhcceeeeeeehHHHHHHHHHHHHHhCCCcceecCCCc
Confidence            77 589999999999999999999999999999999999999999999999999999999999999999999998     


Q ss_pred             --------------------------------------------------------------------------------
Q 021929          157 --------------------------------------------------------------------------------  156 (305)
Q Consensus       157 --------------------------------------------------------------------------------  156 (305)
                                                                                                      
T Consensus       475 n~enlaLQNiQARiRMvLaylfAqL~~wvr~~~GglLVLGSaNVDE~LrGYLTKYDCSSADINPIGgISK~DLr~Fl~~a  554 (706)
T KOG2303|consen  475 NRENLALQNIQARIRMVLAYLFAQLLLWVRGRPGGLLVLGSANVDESLRGYLTKYDCSSADINPIGGISKTDLRRFLQYA  554 (706)
T ss_pred             hhhhHhHHHHHHHHHHHHHHHHHHHHHHhcCCCCceEEEecCccchHhhhhhhhccccccccCCccCccHHHHHHHHHHH
Confidence                                                                                            


Q ss_pred             -------------------------------ccccccCCChhhhhhhheeeeccccChHHHHHHHHHhhCCCCCHHHHHH
Q 021929          157 -------------------------------LDEVDMGMTYEELSVYGRLRKIFHCGPVSMFKNLCYRWGARLTPSEVAE  205 (305)
Q Consensus       157 -------------------------------tDE~dmGmtY~eLd~y~rlrk~~~~gP~~mf~~l~~~w~~~~s~~eia~  205 (305)
                                                     +||+||||||+||++||||||+.+||||+||++|++.|+++++|+||+|
T Consensus       555 ~~~~~lp~L~~il~a~pTAELePl~~g~~~QtDE~dmGmTY~ELsv~GrlRK~~~cGPysMF~kLl~~W~~klsp~qvaE  634 (706)
T KOG2303|consen  555 KEKFGLPALQSILDAPPTAELEPLTDGDYSQTDEADMGMTYAELSVFGRLRKVSKCGPYSMFCKLLHQWGDKLSPRQVAE  634 (706)
T ss_pred             HHhcCchHHHHHhcCCCcccccccccCcccccchhhhCccHHHHHHhHhhccccccCcHHHHHHHHHHhcCcCCHHHHHH
Confidence                                           8999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhhcccccCCCcccccccCCCCCcccccccccCCCCccchhhHHHHHHHhhcCCCCC
Q 021929          206 KVKHFFKYYSINRHKMTVLTPSYHAESYSPEDNRFDLRQFLYNARWPYQFRKIDELVKELDGEKVPF  272 (305)
Q Consensus       206 kVk~ff~~~~~NrHKrt~l~Ps~h~e~yspDdnr~d~r~fly~~~w~~~f~~id~~~~~~~~~~~~~  272 (305)
                      |||+||.+|++||||||++|||||+|+||||||||||||||||++|||||+|||++|+++|....+.
T Consensus       635 KVk~FF~~Y~iNRHKmTvlTPsyHAE~YspeDnRfDlRpFLynp~w~wqfkkIde~v~~~e~~~~~~  701 (706)
T KOG2303|consen  635 KVKRFFSYYSINRHKMTVLTPSYHAENYSPEDNRFDLRPFLYNPSWPWQFKKIDEQVEQLEANSTKS  701 (706)
T ss_pred             HHHHHHhhheeccccceecccccccccCCCccccccccccccCCCCchHHHHHHHHHHHhhhccCcc
Confidence            9999999999999999999999999999999999999999999999999999999999999876653

>PLN02339 NAD+ synthase (glutamine-hydrolysing) Back     alignment and domain information
>PRK02628 nadE NAD synthetase; Reviewed Back     alignment and domain information
>PF02540 NAD_synthase: NAD synthase; InterPro: IPR022310 NAD+ synthase (6 Back     alignment and domain information
>PRK13981 NAD synthetase; Provisional Back     alignment and domain information
>PRK13980 NAD synthetase; Provisional Back     alignment and domain information
>cd00553 NAD_synthase NAD+ synthase is a homodimer, which catalyzes the final step in de novo nicotinamide adenine dinucleotide (NAD+) biosynthesis, an amide transfer from either ammonia or glutamine to nicotinic acid adenine dinucleotide (NaAD) Back     alignment and domain information
>PRK00768 nadE NAD synthetase; Reviewed Back     alignment and domain information
>COG0171 NadE NAD synthase [Coenzyme metabolism] Back     alignment and domain information
>PTZ00323 NAD+ synthase; Provisional Back     alignment and domain information
>TIGR00552 nadE NAD+ synthetase Back     alignment and domain information
>PRK00876 nadE NAD synthetase; Reviewed Back     alignment and domain information
>PF03054 tRNA_Me_trans: tRNA methyl transferase; InterPro: IPR004506 tRNA-specific 2-thiouridylase catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 Back     alignment and domain information
>COG0482 TrmU Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK14665 mnmA tRNA-specific 2-thiouridylase MnmA; Provisional Back     alignment and domain information
>KOG2805 consensus tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK14664 tRNA-specific 2-thiouridylase MnmA; Provisional Back     alignment and domain information
>TIGR00420 trmU tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase Back     alignment and domain information
>cd01998 tRNA_Me_trans tRNA methyl transferase Back     alignment and domain information
>PRK00143 mnmA tRNA-specific 2-thiouridylase MnmA; Reviewed Back     alignment and domain information
>TIGR00268 conserved hypothetical protein TIGR00268 Back     alignment and domain information
>PRK02628 nadE NAD synthetase; Reviewed Back     alignment and domain information
>PRK04527 argininosuccinate synthase; Provisional Back     alignment and domain information
>COG1606 ATP-utilizing enzymes of the PP-loop superfamily [General function prediction only] Back     alignment and domain information
>PLN02347 GMP synthetase Back     alignment and domain information
>TIGR00884 guaA_Cterm GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit Back     alignment and domain information
>PRK00509 argininosuccinate synthase; Provisional Back     alignment and domain information
>PRK13820 argininosuccinate synthase; Provisional Back     alignment and domain information
>PRK00074 guaA GMP synthase; Reviewed Back     alignment and domain information
>TIGR00364 exsB protein Back     alignment and domain information
>cd01990 Alpha_ANH_like_I This is a subfamily of Adenine nucleotide alpha hydrolases superfamily Back     alignment and domain information
>PRK00919 GMP synthase subunit B; Validated Back     alignment and domain information
>cd01996 Alpha_ANH_like_III This is a subfamily of Adenine nucleotide alpha hydrolases superfamily Back     alignment and domain information
>PF00733 Asn_synthase: Asparagine synthase; InterPro: IPR001962 This domain is always found associated with (IPR000583 from INTERPRO) Back     alignment and domain information
>cd01997 GMP_synthase_C The C-terminal domain of GMP synthetase Back     alignment and domain information
>PRK11106 queuosine biosynthesis protein QueC; Provisional Back     alignment and domain information
>cd01991 Asn_Synthase_B_C The C-terminal domain of Asparagine Synthase B Back     alignment and domain information
>TIGR03573 WbuX N-acetyl sugar amidotransferase Back     alignment and domain information
>COG0603 Predicted PP-loop superfamily ATPase [General function prediction only] Back     alignment and domain information
>PF06508 QueC: Queuosine biosynthesis protein QueC; InterPro: IPR018317 This protein family is represented by a single member in nearly every completed large (> 1000 genes) prokaryotic genome Back     alignment and domain information
>TIGR03108 eps_aminotran_1 exosortase 1 system-associated amidotransferase 1 Back     alignment and domain information
>PRK01565 thiamine biosynthesis protein ThiI; Provisional Back     alignment and domain information
>cd01993 Alpha_ANH_like_II This is a subfamily of Adenine nucleotide alpha hydrolases superfamily Back     alignment and domain information
>TIGR01536 asn_synth_AEB asparagine synthase (glutamine-hydrolyzing) Back     alignment and domain information
>TIGR02432 lysidine_TilS_N tRNA(Ile)-lysidine synthetase, N-terminal domain Back     alignment and domain information
>PRK09431 asnB asparagine synthetase B; Provisional Back     alignment and domain information
>TIGR03104 trio_amidotrans asparagine synthase family amidotransferase Back     alignment and domain information
>cd01994 Alpha_ANH_like_IV This is a subfamily of Adenine nucleotide alpha hydrolases superfamily Back     alignment and domain information
>cd01713 PAPS_reductase This domain is found in phosphoadenosine phosphosulphate (PAPS) reductase enzymes or PAPS sulphotransferase Back     alignment and domain information
>PLN00200 argininosuccinate synthase; Provisional Back     alignment and domain information
>TIGR00032 argG argininosuccinate synthase Back     alignment and domain information
>PTZ00077 asparagine synthetase-like protein; Provisional Back     alignment and domain information
>PRK14561 hypothetical protein; Provisional Back     alignment and domain information
>cd01992 PP-ATPase N-terminal domain of predicted ATPase of the PP-loop faimly implicated in cell cycle control [Cell division and chromosome partitioning] Back     alignment and domain information
>COG0367 AsnB Asparagine synthase (glutamine-hydrolyzing) [Amino acid transport and metabolism] Back     alignment and domain information
>PRK08384 thiamine biosynthesis protein ThiI; Provisional Back     alignment and domain information
>PLN02549 asparagine synthase (glutamine-hydrolyzing) Back     alignment and domain information
>cd01999 Argininosuccinate_Synthase Argininosuccinate synthase Back     alignment and domain information
>PRK08349 hypothetical protein; Validated Back     alignment and domain information
>TIGR00342 thiazole biosynthesis/tRNA modification protein ThiI Back     alignment and domain information
>KOG0571 consensus Asparagine synthase (glutamine-hydrolyzing) [Amino acid transport and metabolism] Back     alignment and domain information
>PF01171 ATP_bind_3: PP-loop family; InterPro: IPR011063 This entry represents the PP-loop motif superfamily [,] Back     alignment and domain information
>cd01995 ExsB ExsB is a transcription regulator related protein Back     alignment and domain information
>PRK08576 hypothetical protein; Provisional Back     alignment and domain information
>cd01712 ThiI ThiI is required for thiazole synthesis in the thiamine biosynthesis pathway Back     alignment and domain information
>TIGR03679 arCOG00187 arCOG00187 universal archaeal metal-binding-domain/4Fe-4S-binding-domain containing ABC transporter, ATP-binding protein Back     alignment and domain information
>PRK13795 hypothetical protein; Provisional Back     alignment and domain information
>PRK10696 tRNA 2-thiocytidine biosynthesis protein TtcA; Provisional Back     alignment and domain information
>COG0519 GuaA GMP synthase, PP-ATPase domain/subunit [Nucleotide transport and metabolism] Back     alignment and domain information
>PRK13794 hypothetical protein; Provisional Back     alignment and domain information
>PF02568 ThiI: Thiamine biosynthesis protein (ThiI); InterPro: IPR020536 Thiamine pyrophosphate (TPP) is synthesized de novo in many bacteria and is a required cofactor for many enzymes in the cell Back     alignment and domain information
>COG0037 MesJ tRNA(Ile)-lysidine synthase MesJ [Cell cycle control, cell division, chromosome partitioning] Back     alignment and domain information
>PF01507 PAPS_reduct: Phosphoadenosine phosphosulfate reductase family; InterPro: IPR002500 This domain is found in phosphoadenosine phosphosulphate (PAPS) reductase enzymes or PAPS sulphotransferase Back     alignment and domain information
>PRK05253 sulfate adenylyltransferase subunit 2; Provisional Back     alignment and domain information
>PRK02090 phosphoadenosine phosphosulfate reductase; Provisional Back     alignment and domain information
>PRK10660 tilS tRNA(Ile)-lysidine synthetase; Provisional Back     alignment and domain information
>PRK08557 hypothetical protein; Provisional Back     alignment and domain information
>cd01986 Alpha_ANH_like Adenine nucleotide alpha hydrolases superfamily including N type ATP PPases and ATP sulphurylases Back     alignment and domain information
>PRK01269 tRNA s(4)U8 sulfurtransferase; Provisional Back     alignment and domain information
>TIGR00289 conserved hypothetical protein TIGR00289 Back     alignment and domain information
>COG2117 Predicted subunit of tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PF00764 Arginosuc_synth: Arginosuccinate synthase; InterPro: IPR001518 Argininosuccinate synthase (6 Back     alignment and domain information
>PRK05370 argininosuccinate synthase; Validated Back     alignment and domain information
>KOG1622 consensus GMP synthase [Nucleotide transport and metabolism] Back     alignment and domain information
>COG0137 ArgG Argininosuccinate synthase [Amino acid transport and metabolism] Back     alignment and domain information
>COG1365 Predicted ATPase (PP-loop superfamily) [General function prediction only] Back     alignment and domain information
>COG0301 ThiI Thiamine biosynthesis ATP pyrophosphatase [Coenzyme metabolism] Back     alignment and domain information
>TIGR00434 cysH phosophoadenylyl-sulfate reductase (thioredoxin) Back     alignment and domain information
>TIGR02039 CysD sulfate adenylyltransferase, small subunit Back     alignment and domain information
>PRK12563 sulfate adenylyltransferase subunit 2; Provisional Back     alignment and domain information
>cd01984 AANH_like Adenine nucleotide alpha hydrolases superfamily including N type ATP PPases, ATP sulphurylases Universal Stress Response protein and electron transfer flavoprotein (ETF) Back     alignment and domain information
>TIGR02057 PAPS_reductase phosphoadenosine phosphosulfate reductase, thioredoxin dependent Back     alignment and domain information
>KOG1706 consensus Argininosuccinate synthase [Amino acid transport and metabolism] Back     alignment and domain information
>COG0175 CysH 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes [Amino acid transport and metabolism / Coenzyme metabolism] Back     alignment and domain information
>TIGR03183 DNA_S_dndC putative sulfurtransferase DndC Back     alignment and domain information
>PRK06850 hypothetical protein; Provisional Back     alignment and domain information
>COG2102 Predicted ATPases of PP-loop superfamily [General function prediction only] Back     alignment and domain information
>TIGR00290 MJ0570_dom MJ0570-related uncharacterized domain Back     alignment and domain information
>PF01902 ATP_bind_4: ATP-binding region; InterPro: IPR002761 This domain is about 200 amino acids long with a strongly conserved motif SGGKD at the N-terminal Back     alignment and domain information
>KOG0573 consensus Asparagine synthase [Amino acid transport and metabolism] Back     alignment and domain information
>TIGR02026 BchE magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query305
3ilv_A634 Crystal Structure Of A Glutamine-Dependent Nad(+) S 8e-08
2pz8_A284 Nad+ Synthetase From Bacillus Anthracis With Amp-Cp 1e-04
>pdb|3ILV|A Chain A, Crystal Structure Of A Glutamine-Dependent Nad(+) Synthetase From Cytophaga Hutchinsonii Length = 634 Back     alignment and structure 
Iteration: 1

 Score = 54.3 bits (129), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 39/152 (25%), Positives = 73/152 (48%), Gaps = 7/152 (4%)
Query: 26  LWDYLRRSGASGFLLPLSGGADSSSVAAIVGCMCQLVVKEIANGDEQVKADA---IRIGR 82
           L+DY R+S + GF+L LSGGADSS+ A  V    +  +KE+       K++      +  
Sbjct: 294 LFDYXRKSRSKGFVLSLSGGADSSACAIXVAEXIRKGLKELGLTAFLQKSNXETLFDLPA 353
Query: 83  YANGEFPTESREFAKRIFYTVFMGSENSSQETRMRAKKLADEIGSWHLDVSIDTVVSAFL 142
             +  F  ++++       T +  + NS  ET   AK LA+ IG+   + S+D  +  + 
Sbjct: 354 LQHLPFEEQAKKITAVFLTTAYQSTRNSGDETYTSAKTLAESIGATFYNWSVDEEIEQYK 413
Query: 143 SLFQTLTGKRPRYKLDEVDMGMTYEELSVYGR 174
           +  + +  +   ++ D++    T + +   GR
Sbjct: 414 ATIENVIERPLTWEKDDI----TLQNIQARGR 441
>pdb|2PZ8|A Chain A, Nad+ Synthetase From Bacillus Anthracis With Amp-Cpp And Mg2+ Length = 284 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query305
3ilv_A634 Glutamine-dependent NAD(+) synthetase; protein str 1e-37
3ilv_A634 Glutamine-dependent NAD(+) synthetase; protein str 3e-29
3sdb_A680 Glutamine-dependent NAD(+) synthetase; glutamine-a 4e-28
3sdb_A680 Glutamine-dependent NAD(+) synthetase; glutamine-a 7e-24
3p52_A249 NH(3)-dependent NAD(+) synthetase; structural geno 2e-08
3fiu_A249 NH(3)-dependent NAD(+) synthetase; rossman fold, a 2e-08
1xng_A268 NH(3)-dependent NAD(+) synthetase; amidotransferas 3e-07
1kqp_A271 NAD+ synthase, NH(3)-dependent NAD(+) synthetase, 4e-07
3dpi_A285 NAD+ synthetase; ssgcid, decode, structural genomi 1e-06
3n05_A590 NH(3)-dependent NAD(+) synthetase; ligase, structu 2e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-06
2e18_A257 NH(3)-dependent NAD(+) synthetase; ligase, structu 4e-06
4f4h_A565 Glutamine dependent NAD+ synthetase; structural ge 3e-05
3q4g_A279 NH(3)-dependent NAD(+) synthetase; structural geno 7e-05
>3ilv_A Glutamine-dependent NAD(+) synthetase; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 1.79A {Cytophaga hutchinsonii atcc 33406} Length = 634 Back     alignment and structure
 Score =  140 bits (354), Expect = 1e-37
 Identities = 40/160 (25%), Positives = 75/160 (46%), Gaps = 7/160 (4%)

Query: 11  YHSPEEEIAFGPGCWLWDYLRRSGASGFLLPLSGGADSSSVAAIVGCMCQLVVKEIANGD 70
               E E        L+DY+R+S + GF+L LSGGADSS+ A +V  M +  +KE+    
Sbjct: 279 DLEKEFEFWEATSLGLFDYMRKSRSKGFVLSLSGGADSSACAIMVAEMIRKGLKELGLTA 338

Query: 71  EQVKADAIRIG---RYANGEFPTESREFAKRIFYTVFMGSENSSQETRMRAKKLADEIGS 127
              K++   +       +  F  ++++       T +  + NS  ET   AK LA+ IG+
Sbjct: 339 FLQKSNMETLFDLPALQHLPFEEQAKKITAVFLTTAYQSTRNSGDETYTSAKTLAESIGA 398

Query: 128 WHLDVSIDTVVSAFLSLFQTLTGKRPRYKLDEVDMGMTYE 167
              + S+D  +  + +  + +  +   ++ D++    T +
Sbjct: 399 TFYNWSVDEEIEQYKATIENVIERPLTWEKDDI----TLQ 434
>3ilv_A Glutamine-dependent NAD(+) synthetase; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 1.79A {Cytophaga hutchinsonii atcc 33406} Length = 634 Back     alignment and structure
>3sdb_A Glutamine-dependent NAD(+) synthetase; glutamine-amidotransferase, glutaminase, glutamine-dependent synthetase, ligase; 2.00A {Mycobacterium tuberculosis} PDB: 3seq_A* 3sez_A* 3szg_A* 3dla_A* 3syt_A* Length = 680 Back     alignment and structure
>3sdb_A Glutamine-dependent NAD(+) synthetase; glutamine-amidotransferase, glutaminase, glutamine-dependent synthetase, ligase; 2.00A {Mycobacterium tuberculosis} PDB: 3seq_A* 3sez_A* 3szg_A* 3dla_A* 3syt_A* Length = 680 Back     alignment and structure
>3p52_A NH(3)-dependent NAD(+) synthetase; structural genomics, center for structural genomics of infec diseases, NADE, CSGI; 2.74A {Campylobacter jejuni} Length = 249 Back     alignment and structure
>3fiu_A NH(3)-dependent NAD(+) synthetase; rossman fold, adenine nucleotide alpha hydrolase-like, ATP- binding, ligase, nucleotide-binding; HET: AMP; 1.85A {Francisella tularensis subsp} Length = 249 Back     alignment and structure
>1xng_A NH(3)-dependent NAD(+) synthetase; amidotransferase, ligase; HET: DND ATP; 1.70A {Helicobacter pylori} SCOP: c.26.2.1 PDB: 1xnh_A Length = 268 Back     alignment and structure
>1kqp_A NAD+ synthase, NH(3)-dependent NAD(+) synthetase, SPOR; ligase, amidotransferase, ATP pyrophosphatase, NAD-adenylate; HET: ADJ; 1.03A {Bacillus subtilis} SCOP: c.26.2.1 PDB: 1fyd_A* 1ifx_A* 1ee1_A* 1ih8_A* 1nsy_A* 2nsy_A* 2pzb_A 2pza_A* 2pz8_A Length = 271 Back     alignment and structure
>3dpi_A NAD+ synthetase; ssgcid, decode, structural genomics, PSI, protein structure initiative; 2.20A {Burkholderia pseudomallei} Length = 285 Back     alignment and structure
>3n05_A NH(3)-dependent NAD(+) synthetase; ligase, structural genomics, protein structure initiative, P nysgrc; 2.35A {Streptomyces avermitilis} Length = 590 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>2e18_A NH(3)-dependent NAD(+) synthetase; ligase, structural genomics, NPPSFA, national project on Pro structural and functional analyses; 2.10A {Pyrococcus horikoshii} Length = 257 Back     alignment and structure
>4f4h_A Glutamine dependent NAD+ synthetase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, ligase; 1.75A {Burkholderia thailandensis} Length = 565 Back     alignment and structure
>3q4g_A NH(3)-dependent NAD(+) synthetase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; 2.40A {Vibrio cholerae} Length = 279 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query305
3ilv_A634 Glutamine-dependent NAD(+) synthetase; protein str 100.0
4f4h_A565 Glutamine dependent NAD+ synthetase; structural ge 100.0
3sdb_A680 Glutamine-dependent NAD(+) synthetase; glutamine-a 99.97
3n05_A590 NH(3)-dependent NAD(+) synthetase; ligase, structu 99.94
1xng_A268 NH(3)-dependent NAD(+) synthetase; amidotransferas 99.94
1wxi_A275 NH(3)-dependent NAD(+) synthetase; NADE, E.coli, l 99.94
1kqp_A271 NAD+ synthase, NH(3)-dependent NAD(+) synthetase, 99.94
3p52_A249 NH(3)-dependent NAD(+) synthetase; structural geno 99.93
3q4g_A279 NH(3)-dependent NAD(+) synthetase; structural geno 99.93
2e18_A257 NH(3)-dependent NAD(+) synthetase; ligase, structu 99.92
3dpi_A285 NAD+ synthetase; ssgcid, decode, structural genomi 99.91
3fiu_A249 NH(3)-dependent NAD(+) synthetase; rossman fold, a 99.9
2hma_A 376 Probable tRNA (5-methylaminomethyl-2-thiouridylat 99.11
2der_A 380 TRNA-specific 2-thiouridylase MNMA; protein-RNA co 98.97
2vxo_A 697 GMP synthase [glutamine-hydrolyzing]; proto-oncoge 98.97
2dpl_A308 GMP synthetase, GMP synthase [glutamine-hydrolyzin 98.84
1gpm_A525 GMP synthetase, XMP aminase; class I glutamine ami 98.83
2pg3_A232 Queuosine biosynthesis protein QUEC; YP_049261.1, 98.75
2ywb_A503 GMP synthase [glutamine-hydrolyzing]; GMP syntheta 98.72
3bl5_A219 Queuosine biosynthesis protein QUEC; PREQ1 biosynt 98.71
3uow_A556 GMP synthetase; structural genomics consortium, SG 98.7
1jgt_A513 Beta-lactam synthetase; asparagine synthetase, cla 98.61
3tqi_A527 GMP synthase [glutamine-hydrolyzing]; ligase; 2.84 98.56
1vl2_A 421 Argininosuccinate synthase; TM1780, structural gen 98.54
1q15_A503 CARA; CMPR, (2S,5S)-5-carboxymethylproline, B-LS, 98.47
3k32_A203 Uncharacterized protein MJ0690; predicted subunit 98.46
1sur_A215 PAPS reductase; assimilatory sulfate reduction, 3- 98.35
1ct9_A553 Asparagine synthetase B; amidotransferase, substra 98.32
2c5s_A413 THII, probable thiamine biosynthesis protein THII; 98.31
1kor_A 400 Argininosuccinate synthetase; ligase, riken struct 98.28
1k92_A 455 Argininosuccinate synthase, argininosuccinate SY; 98.24
3rjz_A237 N-type ATP pyrophosphatase superfamily; structural 98.23
2nz2_A 413 Argininosuccinate synthase; amino-acid biosynthesi 98.17
1wy5_A317 TILS, hypothetical UPF0072 protein AQ_1887; N-type 98.15
3a2k_A 464 TRNA(Ile)-lysidine synthase; ligase, pseudo-knot, 97.98
2o8v_A252 Phosphoadenosine phosphosulfate reductase; disulfi 97.98
1ni5_A 433 Putative cell cycle protein MESJ; structural genom 97.83
1vbk_A307 Hypothetical protein PH1313; structural genomics, 97.79
2wsi_A306 FAD synthetase; transferase, nucleotidyltransferas 97.53
1zun_A325 Sulfate adenylyltransferase subunit 2; beta barrel 97.52
2oq2_A261 Phosphoadenosine phosphosulfate reductase; sulfate 97.44
2goy_A275 Adenosine phosphosulfate reductase; iron sulfur cl 96.97
3fwk_A308 FMN adenylyltransferase; FAD biosynthesis, alpha/b 95.46
>3ilv_A Glutamine-dependent NAD(+) synthetase; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 1.79A {Cytophaga hutchinsonii atcc 33406} Back     alignment and structure
Probab=100.00  E-value=1.1e-46  Score=386.04  Aligned_cols=245  Identities=27%  Similarity=0.387  Sum_probs=210.7

Q ss_pred             ccCCcHHHHHhcHHHHHHHHHHHhCCCceEEeccCchHHHHHHHHHHHhHHHHHHHHhcCchhHHHHHH-----HhhccC
Q 021929           10 TYHSPEEEIAFGPGCWLWDYLRRSGASGFLLPLSGGADSSSVAAIVGCMCQLVVKEIANGDEQVKADAI-----RIGRYA   84 (305)
Q Consensus        10 ~~~~peeEi~~~~a~~L~DyLrrsg~~g~~LgLSGGiDSs~tA~lv~~mc~~v~~a~~~g~~~v~~~~~-----~ig~~~   84 (305)
                      .++.|+|||..+++|||||||+++|.++++||||||||||++|+||++||+++++++  |+++|+.+++     +|....
T Consensus       278 ~~~~~~~~~~~~~~~~l~d~~~~~g~~~vvlglSGGvDSsv~A~Lv~~~~~~a~~al--G~~~v~~~~~~~~~~~~~~~~  355 (634)
T 3ilv_A          278 DDLEKEFEFWEATSLGLFDYMRKSRSKGFVLSLSGGADSSACAIMVAEMIRKGLKEL--GLTAFLQKSNMETLFDLPALQ  355 (634)
T ss_dssp             --CCHHHHHHHHHHHHHHHHHHHTTCCSEEEECCSSHHHHHHHHHHHHHHHHHHHHH--CHHHHHHHHTCGGGCCSSCSS
T ss_pred             CCCCcHHHHHHHHHHHHHHHHHHhCCCeEEEEccCCHHHHHHHHHHHHHHHHHHHHh--Cchhhhhhhhccccccccccc
Confidence            457889999999999999999999999999999999999999999999999999996  8899999987     344443


Q ss_pred             CCCCCcchhhhcCCeEEEEEEcCCCCCHHHHHHHHHHHHHhCCcEEEEechHHHHHHHHHhhhhcCCCCccc--------
Q 021929           85 NGEFPTESREFAKRIFYTVFMGSENSSQETRMRAKKLADEIGSWHLDVSIDTVVSAFLSLFQTLTGKRPRYK--------  156 (305)
Q Consensus        85 ~~~~p~~~~e~~~~~l~t~yM~t~nSs~et~~~A~~LA~~iGi~h~~i~Id~~v~a~~~~f~~~~g~~prfr--------  156 (305)
                      ..+.|.+++++|+..++||||++.+|+.++.++|++||+.||++|++|||+++++++++.|...+|++|.+.        
T Consensus       356 ~~~~~~~~~~~~~~~~~~v~m~~~~ss~~~~~dA~~la~~LGi~~~~IdI~~~~~~~~~~~~~~~g~~p~~~~~~~~~~N  435 (634)
T 3ilv_A          356 HLPFEEQAKKITAVFLTTAYQSTRNSGDETYTSAKTLAESIGATFYNWSVDEEIEQYKATIENVIERPLTWEKDDITLQN  435 (634)
T ss_dssp             CTTSHHHHHHHHHHHEEEEEEECTTCCSHHHHHHHHHHHHHTCEEEEEECHHHHHHHHHHHHHHTTSCCCTTTCHHHHHH
T ss_pred             ccccccchhHhhhheeeeeecCCCCCCHHHHHHHHHHHHHhCCcEEEEccHHHHHHHHHHHHHhhCCCcccccCcchhhh
Confidence            456788999999999999999999999999999999999999999999999999999988877667666432        


Q ss_pred             --------------------------------------------------------------------------------
Q 021929          157 --------------------------------------------------------------------------------  156 (305)
Q Consensus       157 --------------------------------------------------------------------------------  156 (305)
                                                                                                      
T Consensus       436 ~qaR~R~~~l~~~A~~~g~lvlgTgnksE~~~Gy~T~ygD~~~~~~Pl~~l~KteVr~la~~l~~~~glp~l~~i~~k~p  515 (634)
T 3ilv_A          436 IQARGRAPIIWMLTNVKQALLITTSNRSEGDVGYATMDGDTAGGIAPIAGVDKDFIRSWLRWAEKNRNQHGLHIVNKLAP  515 (634)
T ss_dssp             HHHHTTHHHHHHHHHHHTCEEBCCCCHHHHHTTCSCTTTTTCSSBBTTTTSCHHHHHHHHHHHHHHSCCGGGSSCC----
T ss_pred             hhHHHHHHHHHHHHHhcCCEEeccCchhhHhhCCccccCCcccCCcccCCCcHHHHHHHHHHHHHcCCCchHHHHcCCCC
Confidence                                                                                            


Q ss_pred             -----------ccccccCCChhhhhhhheeeeccccChHHHHHHHHHhhCCCCCHHHHHHHHHHHHHHHHhhhcccccCC
Q 021929          157 -----------LDEVDMGMTYEELSVYGRLRKIFHCGPVSMFKNLCYRWGARLTPSEVAEKVKHFFKYYSINRHKMTVLT  225 (305)
Q Consensus       157 -----------tDE~dmGmtY~eLd~y~rlrk~~~~gP~~mf~~l~~~w~~~~s~~eia~kVk~ff~~~~~NrHKrt~l~  225 (305)
                                 +||++| |||++||.|+++++..+++|++|+.++.+.|+  +++++|+++|++||++|++|||||+++|
T Consensus       516 SaeL~p~~~~q~de~~l-~~Y~~lD~~l~~~~~~~~~~~~i~~~~~~~~~--~~~~~i~~~v~~~~~~~~~~~~Kr~~~p  592 (634)
T 3ilv_A          516 TAELRPSEYTQTDERDL-MPYDVLARIERKAIKERLSPVQVYTALLTEGP--YTKNEFKYWVKKFFRLWSINQWKRERLA  592 (634)
T ss_dssp             ---------------CC-CTTTHHHHHHHHHTTSCCCHHHHHHHHHHHCS--SCHHHHHHHHHHHHHHHHHTHHHHTTCC
T ss_pred             CcCcCcCCCCCCCcccc-CCHHHHHHHHHHHHHcCCCHHHHHHHhhhccC--CCHHHHHHHHHHHHHHHHHhHhccccCC
Confidence                       689999 99999999999999999999999999999995  9999999999999999999999999999


Q ss_pred             CcccccccCCCCCcccccccccCCCCccchhhHHHHHHHhhc
Q 021929          226 PSYHAESYSPEDNRFDLRQFLYNARWPYQFRKIDELVKELDG  267 (305)
Q Consensus       226 Ps~h~e~yspDdnr~d~r~fly~~~w~~~f~~id~~~~~~~~  267 (305)
                      |++|+++||+|. |-|+|   ||.- +-.|+   +.+++|+.
T Consensus       593 p~~~v~~~~~~p-r~~~r---~Pi~-~~~~~---~~~~~~~~  626 (634)
T 3ilv_A          593 PSFHMDDFNIDP-RSWYR---FPIL-SSGFA---KELNDLDQ  626 (634)
T ss_dssp             CBCCCSSCCCCT-TTTCC---CCSS-CCTTH---HHHHHTTC
T ss_pred             CceEEeCCCCCC-CCcee---CCcC-CccHH---HHHHHHHh
Confidence            999999999983 33322   3322 22343   56666664
>4f4h_A Glutamine dependent NAD+ synthetase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, ligase; 1.75A {Burkholderia thailandensis} Back     alignment and structure
>3sdb_A Glutamine-dependent NAD(+) synthetase; glutamine-amidotransferase, glutaminase, glutamine-dependent synthetase, ligase; 2.00A {Mycobacterium tuberculosis} PDB: 3seq_A* 3sez_A* 3szg_A* 3dla_A* 3syt_A* Back     alignment and structure
>3n05_A NH(3)-dependent NAD(+) synthetase; ligase, structural genomics, protein structure initiative, P nysgrc; 2.35A {Streptomyces avermitilis} Back     alignment and structure
>1xng_A NH(3)-dependent NAD(+) synthetase; amidotransferase, ligase; HET: DND ATP; 1.70A {Helicobacter pylori} SCOP: c.26.2.1 PDB: 1xnh_A Back     alignment and structure
>1wxi_A NH(3)-dependent NAD(+) synthetase; NADE, E.coli, ligase; HET: AMP; 1.70A {Escherichia coli} SCOP: c.26.2.1 PDB: 1wxf_A 1wxg_A* 1wxh_A* 1wxe_A* 3hmq_A* Back     alignment and structure
>1kqp_A NAD+ synthase, NH(3)-dependent NAD(+) synthetase, SPOR; ligase, amidotransferase, ATP pyrophosphatase, NAD-adenylate; HET: ADJ; 1.03A {Bacillus subtilis} SCOP: c.26.2.1 PDB: 1fyd_A* 1ifx_A* 1ee1_A* 1ih8_A* 1nsy_A* 2nsy_A* 2pzb_A 2pza_A* 2pz8_A Back     alignment and structure
>3p52_A NH(3)-dependent NAD(+) synthetase; structural genomics, center for structural genomics of infec diseases, NADE, CSGI; 2.74A {Campylobacter jejuni} SCOP: c.26.2.0 Back     alignment and structure
>3q4g_A NH(3)-dependent NAD(+) synthetase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; 2.40A {Vibrio cholerae} SCOP: c.26.2.0 Back     alignment and structure
>2e18_A NH(3)-dependent NAD(+) synthetase; ligase, structural genomics, NPPSFA, national project on Pro structural and functional analyses; 2.10A {Pyrococcus horikoshii} Back     alignment and structure
>3dpi_A NAD+ synthetase; ssgcid, decode, structural genomics, PSI, protein structure initiative; 2.20A {Burkholderia pseudomallei} SCOP: c.26.2.0 Back     alignment and structure
>3fiu_A NH(3)-dependent NAD(+) synthetase; rossman fold, adenine nucleotide alpha hydrolase-like, ATP- binding, ligase, nucleotide-binding; HET: AMP; 1.85A {Francisella tularensis subsp} Back     alignment and structure
>2hma_A Probable tRNA (5-methylaminomethyl-2-thiouridylat methyltransferase; alpha-beta, beta barrel, structural genomics, PSI-2; HET: MSE SAM; 2.41A {Streptococcus pneumoniae} Back     alignment and structure
>2der_A TRNA-specific 2-thiouridylase MNMA; protein-RNA complex, transferase/RNA complex; 3.10A {Escherichia coli} PDB: 2det_A 2deu_A* Back     alignment and structure
>2vxo_A GMP synthase [glutamine-hydrolyzing]; proto-oncogene, phosphoprotein, GMP synthetase, guanine monophosphate synthetase, chromosomal rearrangement; HET: XMP; 2.5A {Homo sapiens} Back     alignment and structure
>2dpl_A GMP synthetase, GMP synthase [glutamine-hydrolyzing] subunit B; pyrococcus horikoshii OT3, structural genomics, NPPSFA; 1.43A {Pyrococcus horikoshii} PDB: 2z0c_A 3a4i_A Back     alignment and structure
>1gpm_A GMP synthetase, XMP aminase; class I glutamine amidotransferase, N-type ATP pyrophosphata transferase (glutamine amidotransferase); HET: AMP CIT; 2.20A {Escherichia coli} SCOP: c.23.16.1 c.26.2.1 d.52.2.1 Back     alignment and structure
>2pg3_A Queuosine biosynthesis protein QUEC; YP_049261.1, hypothetical protein, structural genomics, JOIN for structural genomics; 2.40A {Pectobacterium atrosepticum SCRI1043} SCOP: c.26.2.1 Back     alignment and structure
>2ywb_A GMP synthase [glutamine-hydrolyzing]; GMP synthetase, XMP binding, ATP binding, purine nucleotide biosynthetic pathway, structural genomics; 2.10A {Thermus thermophilus} PDB: 2ywc_A* Back     alignment and structure
>3bl5_A Queuosine biosynthesis protein QUEC; PREQ1 biosynthesis, RNA modification, tRNA, hydrolase; 2.95A {Bacillus subtilis} Back     alignment and structure
>3uow_A GMP synthetase; structural genomics consortium, SGC, purine nucleotide biosy process, ligase; HET: XMP; 2.72A {Plasmodium falciparum} Back     alignment and structure
>1jgt_A Beta-lactam synthetase; asparagine synthetase, clavulanic AC AMPCPP, CEA, carboxyethylarginine, hydrolase; HET: APC CMA; 1.95A {Streptomyces clavuligerus} SCOP: c.26.2.1 d.153.1.1 PDB: 1m1z_A 1mb9_A* 1mbz_A* 1mc1_A* Back     alignment and structure
>3tqi_A GMP synthase [glutamine-hydrolyzing]; ligase; 2.84A {Coxiella burnetii} Back     alignment and structure
>1vl2_A Argininosuccinate synthase; TM1780, structural genomics, JCS protein structure initiative, PSI, joint center for structu genomics, ligase; 1.65A {Thermotoga maritima} SCOP: c.26.2.1 d.210.1.1 Back     alignment and structure
>1q15_A CARA; CMPR, (2S,5S)-5-carboxymethylproline, B-LS, B-lactam synthetase, AS-B, class B asparagine synthetase, AMP-CPP; 2.30A {Pectobacterium carotovorum} SCOP: c.26.2.1 d.153.1.1 PDB: 1q19_A* Back     alignment and structure
>3k32_A Uncharacterized protein MJ0690; predicted subunit of tRNA methyltransferase, methanocaldococcus jannaschii DSM , PSI- 2; 2.50A {Methanocaldococcus jannaschii} Back     alignment and structure
>1sur_A PAPS reductase; assimilatory sulfate reduction, 3-phospho-adenylyl-sulfate reductase, oxidoreductase; 2.00A {Escherichia coli} SCOP: c.26.2.2 Back     alignment and structure
>1ct9_A Asparagine synthetase B; amidotransferase, substrate channeling, asparagine biosynthesis, ligase; HET: AMP GLN; 2.00A {Escherichia coli} SCOP: c.26.2.1 d.153.1.1 Back     alignment and structure
>2c5s_A THII, probable thiamine biosynthesis protein THII; RNA-binding protein, RNA binding protein, tRNA modification, 4-thiouridine synthase; HET: AMP; 2.5A {Bacillus anthracis} SCOP: c.26.2.6 d.308.1.1 Back     alignment and structure
>1kor_A Argininosuccinate synthetase; ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: ANP ARG; 1.95A {Thermus thermophilus} SCOP: c.26.2.1 d.210.1.1 PDB: 1j1z_A* 1j21_A* 1kh1_A 1kh2_A* 1kh3_A* 1j20_A* Back     alignment and structure
>1k92_A Argininosuccinate synthase, argininosuccinate SY; N-type ATP pyrophosphatase, ligase; 1.60A {Escherichia coli} SCOP: c.26.2.1 d.210.1.1 PDB: 1k97_A* 1kp2_A* 1kp3_A* Back     alignment and structure
>3rjz_A N-type ATP pyrophosphatase superfamily; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein; 2.30A {Pyrococcus furiosus} SCOP: c.26.2.1 PDB: 3h7e_A 3rk0_A* 3rk1_A* 1ru8_A 2d13_A Back     alignment and structure
>2nz2_A Argininosuccinate synthase; amino-acid biosynthesis, aspartate, citrulline, ST genomics, structural genomics consortium, SGC, ligase; HET: CIR; 2.40A {Homo sapiens} Back     alignment and structure
>1wy5_A TILS, hypothetical UPF0072 protein AQ_1887; N-type ATP-ppase, structural genomics, translation, NPPSFA; 2.42A {Aquifex aeolicus} SCOP: c.26.2.5 d.229.1.1 PDB: 2e21_A* 2e89_A* Back     alignment and structure
>3a2k_A TRNA(Ile)-lysidine synthase; ligase, pseudo-knot, ligase/RNA complex; 3.65A {Geobacillus kaustophilus} Back     alignment and structure
>2o8v_A Phosphoadenosine phosphosulfate reductase; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli} Back     alignment and structure
>1ni5_A Putative cell cycle protein MESJ; structural genomics, ATPase, PP-type, putative cell cycle PR PSI, protein structure initiative; 2.65A {Escherichia coli} SCOP: b.153.1.2 c.26.2.5 d.229.1.1 Back     alignment and structure
>1vbk_A Hypothetical protein PH1313; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 1.90A {Pyrococcus horikoshii} SCOP: c.26.2.6 d.308.1.1 Back     alignment and structure
>2wsi_A FAD synthetase; transferase, nucleotidyltransferase, nucleotide-binding; HET: FAD; 1.90A {Saccharomyces cerevisiae} Back     alignment and structure
>1zun_A Sulfate adenylyltransferase subunit 2; beta barrel, switch domain, heterodimer, pyrophosphate, G protein; HET: GDP AGS; 2.70A {Pseudomonas syringae} SCOP: c.26.2.2 Back     alignment and structure
>2oq2_A Phosphoadenosine phosphosulfate reductase; sulfate reduction, PAPS reductase, oxidoreductase; HET: A3P; 2.10A {Saccharomyces cerevisiae} Back     alignment and structure
>2goy_A Adenosine phosphosulfate reductase; iron sulfur cluster, nucleotide binding, thiosulfonate intermediate, oxidoreductase; HET: ADX; 2.70A {Pseudomonas aeruginosa} Back     alignment and structure
>3fwk_A FMN adenylyltransferase; FAD biosynthesis, alpha/beta protein, rossmann- like fold, APO-form, extended loop region; HET: BGC; 1.20A {Candida glabrata} PDB: 3g59_A* 3g5a_A* 3g6k_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 305
d1kqpa_271 c.26.2.1 (A:) NH3-dependent NAD+-synthetase {Bacil 2e-16
d1wxia1274 c.26.2.1 (A:2-275) NH3-dependent NAD+-synthetase { 2e-08
d1xnga1255 c.26.2.1 (A:3-257) NH3-dependent NAD+-synthetase { 3e-07
>d1kqpa_ c.26.2.1 (A:) NH3-dependent NAD+-synthetase {Bacillus subtilis [TaxId: 1423]} Length = 271 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Adenine nucleotide alpha hydrolases-like
family: N-type ATP pyrophosphatases
domain: NH3-dependent NAD+-synthetase
species: Bacillus subtilis [TaxId: 1423]

 Score = 75.7 bits (185), Expect = 2e-16
 Identities = 53/274 (19%), Positives = 92/274 (33%), Gaps = 92/274 (33%)

Query: 13  SPEEEIAFGPGCWLWDYLRRSGASGFLLPLSGGADSSSVAAIVGCMCQLVVKEI--ANGD 70
            P++EI      +L  Y++++GA GF+L +SGG DS     + G + QL V+ I    GD
Sbjct: 17  DPKQEIED-RVNFLKQYVKKTGAKGFVLGISGGQDS----TLAGRLAQLAVESIREEGGD 71

Query: 71  EQVKADAIRIGRYANGEFPTESREFAKRIFYTVFM---------------------GSEN 109
            Q  A  +  G   + +    + +F K      F                          
Sbjct: 72  AQFIAVRLPHGTQQDEDDAQLALKFIKPDKSWKFDIKSTVSAFSDQYQQETGDQLTDFNK 131

Query: 110 SSQETRMRAKKLADEIGSWHLDVSIDTVVSAFLSLFQT--------------LTGKRPRY 155
            + + R R        G   L V      +  ++ F T              LT ++ R 
Sbjct: 132 GNVKARTRMIAQYAIGGQEGLLVLGTDHAAEAVTGFFTKYGDGGADLLPLTGLTKRQGRT 191

Query: 156 KL--------------------------DEVDMGMTYEELSVYGRLRKIFHCGPVSMFKN 189
            L                          DE ++G++Y+E+  Y   +++           
Sbjct: 192 LLKELGAPERLYLKEPTADLLDEKPQQSDETELGISYDEIDDYLEGKEV----------- 240

Query: 190 LCYRWGARLTPSEVAEKVKHFFKYYSINRHKMTV 223
                      ++V+E ++   K YS+  HK  V
Sbjct: 241 ----------SAKVSEALE---KRYSMTEHKRQV 261
>d1wxia1 c.26.2.1 (A:2-275) NH3-dependent NAD+-synthetase {Escherichia coli [TaxId: 562]} Length = 274 Back     information, alignment and structure
>d1xnga1 c.26.2.1 (A:3-257) NH3-dependent NAD+-synthetase {Helicobacter pylori [TaxId: 210]} Length = 255 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query305
d1xnga1255 NH3-dependent NAD+-synthetase {Helicobacter pylori 99.95
d1kqpa_271 NH3-dependent NAD+-synthetase {Bacillus subtilis [ 99.94
d1wxia1274 NH3-dependent NAD+-synthetase {Escherichia coli [T 99.91
d1gpma1197 GMP synthetase, central domain {Escherichia coli [ 99.19
d1jgta1299 beta-Lactam synthetase {Streptomyces clavuligerus 98.69
d1wy5a1216 TilS-like protein Aq_1887 {Aquifex aeolicus [TaxId 98.37
d1q15a1296 beta-Lactam synthetase {Pectobacterium carotovorum 98.34
d2pg3a1230 Queuosine biosynthesis protein QueC {Erwinia carot 98.2
d1j20a1165 Argininosuccinate synthetase, N-terminal domain {T 98.16
d1vl2a1168 Argininosuccinate synthetase, N-terminal domain {T 98.16
d2c5sa1218 Thiamine biosynthesis protein ThiI, C-terminal dom 98.12
d1k92a1188 Argininosuccinate synthetase, N-terminal domain {E 98.08
d1ni5a1227 tRNA-Ile-lysidine synthetase, TilS, N-terminal dom 98.07
d1ct9a1324 Asparagine synthetase B, C-terminal domain {Escher 97.88
d1zuna1211 Sulfate adenylyltransferase subunit 2, CysD {Pseud 97.67
d1sura_215 Phosphoadenylyl sulphate (PAPS) reductase {Escheri 97.05
d2d13a1226 Hypothetical protein PH1257 {Archaeon Pyrococcus h 96.15
d1vbka1132 Hypothetical protein PH1313, C-terminal domain {Ar 95.39
>d1xnga1 c.26.2.1 (A:3-257) NH3-dependent NAD+-synthetase {Helicobacter pylori [TaxId: 210]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Adenine nucleotide alpha hydrolases-like
family: N-type ATP pyrophosphatases
domain: NH3-dependent NAD+-synthetase
species: Helicobacter pylori [TaxId: 210]

Probab=99.95  E-value=5.7e-29  Score=226.89  Aligned_cols=170  Identities=19%  Similarity=0.134  Sum_probs=130.5

Q ss_pred             cHHHHHhcHHHHHHHHHHHhCCCceEEeccCchHHHHHHHHHHHhHHHHHHHHhcCchhHHHHHHHhhccCCCCCCcchh
Q 021929           14 PEEEIAFGPGCWLWDYLRRSGASGFLLPLSGGADSSSVAAIVGCMCQLVVKEIANGDEQVKADAIRIGRYANGEFPTESR   93 (305)
Q Consensus        14 peeEi~~~~a~~L~DyLrrsg~~g~~LgLSGGiDSs~tA~lv~~mc~~v~~a~~~g~~~v~~~~~~ig~~~~~~~p~~~~   93 (305)
                      +.+++...+..||++|++++|.++++||||||||||++|+|+       +++               +++          
T Consensus         2 d~~~~~~~l~~~l~~~~~~~G~k~vvvglSGGVDSsv~A~L~-------~~a---------------~~~----------   49 (255)
T d1xnga1           2 DYQKLIVYLCDFLEKEVQKRGFKKVVYGLSGGLDSAVVGVLC-------QKV---------------FKE----------   49 (255)
T ss_dssp             CHHHHHHHHHHHHHHHHHHTTCCCEEEECCSSHHHHHHHHHH-------HHH---------------HGG----------
T ss_pred             CHHHHHHHHHHHHHHHHHHcCCCeEEEECCCCHHHHHHHHHH-------HHH---------------hhh----------
Confidence            468899999999999999999999999999999999999998       455               334          


Q ss_pred             hhcCCeEEEEEEcCCCCCHHHHHHHHHHHHHhCCcEEEEechHHHHHHHHHhhhh-----cCCCCccc------------
Q 021929           94 EFAKRIFYTVFMGSENSSQETRMRAKKLADEIGSWHLDVSIDTVVSAFLSLFQTL-----TGKRPRYK------------  156 (305)
Q Consensus        94 e~~~~~l~t~yM~t~nSs~et~~~A~~LA~~iGi~h~~i~Id~~v~a~~~~f~~~-----~g~~prfr------------  156 (305)
                           ++++++|++..+++++.++|+.+|+.+|++|.+++++.+.+.+...+...     .|...|.|            
T Consensus        50 -----~v~~v~mp~~~~~~~~~~~A~~la~~lgi~~~~i~~~~~~~~~~~~~~~~~~~~~~n~~ar~r~~~l~~~a~~~~  124 (255)
T d1xnga1          50 -----NAHALLMPSSVSMPENKTDALNLCEKFSIPYTEYSIAPYDAIFSSHFKDASLTRKGNFCARLRMAFLYDYSLKSD  124 (255)
T ss_dssp             -----GEEEEECCCSSSCHHHHHHHHHHHHHHTCCEEECCCHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             -----hcchhcCcchhcchhhHHHHHHHHHHhhhcchhhhhHHHHhhhhhhccchhhhhHHHHHHHHhHHHHHHHHhhcC
Confidence                 49999999999999999999999999999999999998877766655431     11122222            


Q ss_pred             ----------------------------------------------------------------ccccccCCChhhhhhh
Q 021929          157 ----------------------------------------------------------------LDEVDMGMTYEELSVY  172 (305)
Q Consensus       157 ----------------------------------------------------------------tDE~dmGmtY~eLd~y  172 (305)
                                                                                      +||++|||||+++|.|
T Consensus       125 ~~v~gt~n~~e~~~g~~t~~gd~~~~l~Pl~dL~K~eVr~LA~~lglP~~i~~k~ps~~L~~~q~de~~lg~~Y~~lD~~  204 (255)
T d1xnga1         125 SLVIGTSNKSERMLGYGTLFGDLACAINPIGELFKTEVYELARRLNIPKKILNKPPSADLFVGQSDEKDLGYPYSVIDPL  204 (255)
T ss_dssp             CEEBCCCCHHHHHHTCSCTTTTTCCSEETTTTSCHHHHHHHHHHTTCCHHHHTSCCCCCSSTTCCHHHHHSSCHHHHHHH
T ss_pred             CccCCCccHHHHhccccchhhhhccchhhhcCcCHHHHHHHHHHcCCchhhhcCCCCcccccccCcHhhhCCChHHHHHH
Confidence                                                                            8999999999999988


Q ss_pred             heeeeccccChHHHHHHHHHhhCCCCCHHHHHHHHHHHHHHHHhhhcccccCCCcc
Q 021929          173 GRLRKIFHCGPVSMFKNLCYRWGARLTPSEVAEKVKHFFKYYSINRHKMTVLTPSY  228 (305)
Q Consensus       173 ~rlrk~~~~gP~~mf~~l~~~w~~~~s~~eia~kVk~ff~~~~~NrHKrt~l~Ps~  228 (305)
                      .+-......++....+.+...   ++++    +.|++|.+++.+|+|||+ +||..
T Consensus       205 l~~~~~~~~~~~~~~~~~~~~---~~~~----~~v~~i~~~~~~~~~Kr~-~p~~~  252 (255)
T d1xnga1         205 LKDIEALFQTKPIDTETLAQL---GYDE----ILVKNITSRIQKNAFKLE-LPAIA  252 (255)
T ss_dssp             HHHHHHHSSSSCCCHHHHHHT---TCCH----HHHHHHHHHHHHTGGGGS-CCEEC
T ss_pred             HHHHHhhcccccCCHHHHHHc---CCCH----HHHHHHHHHHHHhHhccc-CCCCc
Confidence            653222222222222222222   2443    568899999999999997 67754
>d1kqpa_ c.26.2.1 (A:) NH3-dependent NAD+-synthetase {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1wxia1 c.26.2.1 (A:2-275) NH3-dependent NAD+-synthetase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1gpma1 c.26.2.1 (A:208-404) GMP synthetase, central domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1jgta1 c.26.2.1 (A:210-508) beta-Lactam synthetase {Streptomyces clavuligerus [TaxId: 1901]} Back     information, alignment and structure
>d1wy5a1 c.26.2.5 (A:1-216) TilS-like protein Aq_1887 {Aquifex aeolicus [TaxId: 63363]} Back     information, alignment and structure
>d1q15a1 c.26.2.1 (A:206-501) beta-Lactam synthetase {Pectobacterium carotovorum [TaxId: 554]} Back     information, alignment and structure
>d2pg3a1 c.26.2.1 (A:1-230) Queuosine biosynthesis protein QueC {Erwinia carotovora [TaxId: 554]} Back     information, alignment and structure
>d1j20a1 c.26.2.1 (A:1-165) Argininosuccinate synthetase, N-terminal domain {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1vl2a1 c.26.2.1 (A:2-169) Argininosuccinate synthetase, N-terminal domain {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2c5sa1 c.26.2.6 (A:174-391) Thiamine biosynthesis protein ThiI, C-terminal domain {Bacillus anthracis [TaxId: 1392]} Back     information, alignment and structure
>d1k92a1 c.26.2.1 (A:1-188) Argininosuccinate synthetase, N-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ni5a1 c.26.2.5 (A:0-226) tRNA-Ile-lysidine synthetase, TilS, N-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ct9a1 c.26.2.1 (A:193-516) Asparagine synthetase B, C-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1zuna1 c.26.2.2 (A:1-211) Sulfate adenylyltransferase subunit 2, CysD {Pseudomonas syringae pv. tomato [TaxId: 323]} Back     information, alignment and structure
>d1sura_ c.26.2.2 (A:) Phosphoadenylyl sulphate (PAPS) reductase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2d13a1 c.26.2.1 (A:2-227) Hypothetical protein PH1257 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1vbka1 c.26.2.6 (A:176-307) Hypothetical protein PH1313, C-terminal domain {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure