Citrus Sinensis ID: 031993

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------15
Protein Sequence
MHPVEPPWLHEFTGVMRNVYGPVTAAKTIYEDEQGYLIIISLPFADLKRVKVTWWNNLTHGVVKISSLSTACMPYIQRNDRTFKLTDPSPEHCPPGEFIREIPLPTRIPDDAKLEAYGDETGTGLEIMVPKHRVGPEEHEVFKFLTSET
Secondary Structure (PSIPRED)
ccccccccccccccccccccccEEEEEEEEEccccEEEEEEccccccccEEEEEEEcccccEEEEEEEEcccccEEEEccEEEEEccccccccccccEEEEEccccccccccccEEEEcccccEEEEEEEccccccccEEEEEEEEccc
Secondary Structure Prediction (SSPRO)
ccccccccHHHccccEEccccccEEEEEEEEccccEEEEEEccccccccEEEEEEccccccEEEEEEEEcccccEEEEcccEEEEccccccccccccEEEEcccccccccccEEEEEEcccccEEEEEEccccccccccEEEEEEcccc
Coil and Loop (DISEMBL)
mhpveppwlheftgvmrnvygpvtaaktiyedeQGYLIIISLPFADLKRVKVTWWNNLTHGVVKISSlstacmpyiqrndrtfkltdpspehcppgefireiplptripddakleaygdetgtgleimvpkhrvgpeehEVFKFLTSET
Flexible Loop (DISEMBL)
mhpveppwlhefTGVMRNVYGPVTAAKTIYEDEQGYLIIISLPFADLKRVKVTWWNNLTHgvvkisslstaCMPYIQRNDRTFKLTDPSPEHCPPGEFIREIPLPTRIPDDAKLEAYGDETGTGLEImvpkhrvgpeehevfkfltset
Low Complexity Region (SEG)
MHPVEPPWLHEFTGVMRNVYGPVTAAKTIYEDEQGYLIIISLPFADLKRVKVTWWNNLTHGVVKISSLSTACMPYIQRNDRTFKLTDPSPEHCPPGEFIREIPLPTRIPDDAKLEAYGDETGTGLEIMVPKHRVGPEEHEVFKFLTSET
Disordered region (IsUnstruct)
*******WLHEFTGVMRNVYGPVTAAKTIYEDEQGYLIIISLPFADLKRVKVTWWNNLTHGVVKISSLSTACMPYIQRNDRTFK*************FIREIPL************Y*****TGLEIMV********************
Disordered Region (DISOPRED)
****EPPWLHEFTGVMRNVYGPVTAAKTIYEDEQGYLIIISLPFADLKRVKVTWWNNLTHGVVKISSLSTACMPYIQRNDRTFKLTDPSPEHCPPGEFIREIPLPTRIPDDAKLEAYGDETGTGLEIMVPKHRVGPEEHEVFKFLT***
Disordered Region (DISEMBL)
MHPVEPPWLHEFTGVMRNVYGPVTAAKTIYEDEQGYLIIISLPFADLKRVKVTWWNNLTHGVVKISSLSTACMPYIQRNDRTFKLTDPSPEHCPPGEFIREIPLPTRIPDDAKLEAYGDETGTGLEIMVPKHRVGPEEHEVFKFLTSET
Disordered Region (DISPRO)
****EPPWLHEFTGVMRNVYGPVTAAKTIYEDEQGYLIIISLPFADLKRVKVTWWNNLTHGVVKISSLSTACMPYIQRNDRTFKLTDPSPEHCPPGEFIREIPLPTRIPDDAKLEAYGDETGTGLEIMVPKHRVGPEEHEVFKFLT***
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MHPVEPPWLHEFTGVMRNVYGPVTAAKTIYEDEQGYLIIISLPFADLKRVKVTWWNNLTHGVVKISSLSTACMPYIQRNDRTFKLTDPSPEHCPPGEFIREIPLPTRIPDDAKLEAYGDETGTGLEIMVPKHRVGPEEHEVFKFLTSET
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	149
449450706	502	PREDICTED: uncharacterized protein LOC10	0.946	0.280	0.872	3e-70
225434992	500	PREDICTED: uncharacterized protein LOC10	0.946	0.282	0.872	6e-68
255575052	500	conserved hypothetical protein [Ricinus	0.946	0.282	0.808	1e-63
225449551	493	PREDICTED: uncharacterized protein LOC10	0.946	0.286	0.794	1e-61
147767466	493	hypothetical protein VITISV_041185 [Viti	0.946	0.286	0.794	2e-61
224113455	484	predicted protein [Populus trichocarpa]	0.939	0.289	0.792	3e-61
224100965	484	predicted protein [Populus trichocarpa]	0.946	0.291	0.780	6e-61
293334315	542	uncharacterized protein LOC100383256 [Ze	0.939	0.258	0.764	1e-58
326490744	537	predicted protein [Hordeum vulgare subsp	0.939	0.260	0.764	2e-58
18399669	489	protein FYD [Arabidopsis thaliana] gi|30	0.946	0.288	0.730	3e-58

>gi|449450706|ref|XP_004143103.1| PREDICTED: uncharacterized protein LOC101220444 [Cucumis sativus] gi|449515281|ref|XP_004164678.1| PREDICTED: uncharacterized protein LOC101224026 [Cucumis sativus]

 Score =  269 bits (688), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 123/141 (87%), Positives = 136/141 (96%)

Query: 1   MHPVEPPWLHEFTGVMRNVYGPVTAAKTIYEDEQGYLIIISLPFADLKRVKVTWWNNLTH 60
           +HP+EP WL++F+GVMRN+YGPVTAAKTIYEDEQGYLII+SLP ADL+RVKVTWWNNLTH
Sbjct: 346 IHPIEPLWLNDFSGVMRNIYGPVTAAKTIYEDEQGYLIIVSLPLADLERVKVTWWNNLTH 405

Query: 61  GVVKISSLSTACMPYIQRNDRTFKLTDPSPEHCPPGEFIREIPLPTRIPDDAKLEAYGDE 120
           GVVKI+S+ST CMP+++RNDRTFKLTDPSPEHCPPGEFIREIPLPTRIPDDAKLEAYGDE
Sbjct: 406 GVVKITSVSTGCMPFVKRNDRTFKLTDPSPEHCPPGEFIREIPLPTRIPDDAKLEAYGDE 465

Query: 121 TGTGLEIMVPKHRVGPEEHEV 141
           TGT LEIMVPKHRVG EEHEV
Sbjct: 466 TGTSLEIMVPKHRVGLEEHEV 486

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225434992|ref|XP_002284056.1| PREDICTED: uncharacterized protein LOC100243332 [Vitis vinifera]

 Score =  261 bits (668), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 123/141 (87%), Positives = 133/141 (94%)

Query: 1   MHPVEPPWLHEFTGVMRNVYGPVTAAKTIYEDEQGYLIIISLPFADLKRVKVTWWNNLTH 60
           +H +E PWL++F+GVMRNV GPVTAAKTIYEDE+GYLIIISLPFADLKRVKVTWWN LTH
Sbjct: 344 IHSIELPWLNKFSGVMRNVSGPVTAAKTIYEDEEGYLIIISLPFADLKRVKVTWWNTLTH 403

Query: 61  GVVKISSLSTACMPYIQRNDRTFKLTDPSPEHCPPGEFIREIPLPTRIPDDAKLEAYGDE 120
           GVVKISS+ST+CMP I+RNDRTFKLTDP PEHCPPGEFIREIPL TRIPDDAKLEAYGDE
Sbjct: 404 GVVKISSVSTSCMPIIKRNDRTFKLTDPMPEHCPPGEFIREIPLATRIPDDAKLEAYGDE 463

Query: 121 TGTGLEIMVPKHRVGPEEHEV 141
           TGT LEI+VPKHRVGPEEHEV
Sbjct: 464 TGTVLEILVPKHRVGPEEHEV 484

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255575052|ref|XP_002528431.1| conserved hypothetical protein [Ricinus communis] gi|223532107|gb|EEF33914.1| conserved hypothetical protein [Ricinus communis]

 Score =  247 bits (631), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 114/141 (80%), Positives = 131/141 (92%)

Query: 1   MHPVEPPWLHEFTGVMRNVYGPVTAAKTIYEDEQGYLIIISLPFADLKRVKVTWWNNLTH 60
           +HPVEP W++EF+GVM+NVYGPVTAAKTIYED++ +LIIISLPFADL+RVKVTW N   H
Sbjct: 344 IHPVEPAWINEFSGVMKNVYGPVTAAKTIYEDDESFLIIISLPFADLQRVKVTWRNTNLH 403

Query: 61  GVVKISSLSTACMPYIQRNDRTFKLTDPSPEHCPPGEFIREIPLPTRIPDDAKLEAYGDE 120
           G+VKIS +STACMP+I+R+DRTFKLTDP+PEHCPPGEFIREIPLP RIP+DAKLEAY DE
Sbjct: 404 GIVKISCISTACMPFIKRHDRTFKLTDPTPEHCPPGEFIREIPLPNRIPEDAKLEAYRDE 463

Query: 121 TGTGLEIMVPKHRVGPEEHEV 141
           TGT LEI+VPKHRVGPEEHEV
Sbjct: 464 TGTMLEIIVPKHRVGPEEHEV 484

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225449551|ref|XP_002283773.1| PREDICTED: uncharacterized protein LOC100247953 isoform 1 [Vitis vinifera] gi|359486813|ref|XP_003633477.1| PREDICTED: uncharacterized protein LOC100247953 isoform 2 [Vitis vinifera] gi|296086249|emb|CBI31690.3| unnamed protein product [Vitis vinifera]

 Score =  240 bits (612), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 112/141 (79%), Positives = 130/141 (92%)

Query: 1   MHPVEPPWLHEFTGVMRNVYGPVTAAKTIYEDEQGYLIIISLPFADLKRVKVTWWNNLTH 60
           +HP+EP W  EF+GVMRNVYGPVTAAKTIYED++G+LIIISLPFADL+RVKVTW N  +H
Sbjct: 337 IHPIEPHWSKEFSGVMRNVYGPVTAAKTIYEDDEGFLIIISLPFADLERVKVTWRNTPSH 396

Query: 61  GVVKISSLSTACMPYIQRNDRTFKLTDPSPEHCPPGEFIREIPLPTRIPDDAKLEAYGDE 120
           G+VKIS +ST CMP+I+R++RTFKLTDP+PEHCPPG+FIREIPLPTRIP+DAKLEAY DE
Sbjct: 397 GIVKISCVSTVCMPFIKRHNRTFKLTDPTPEHCPPGDFIREIPLPTRIPEDAKLEAYRDE 456

Query: 121 TGTGLEIMVPKHRVGPEEHEV 141
           TGT LEI+VPK RVGPEEHEV
Sbjct: 457 TGTMLEIVVPKQRVGPEEHEV 477

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147767466|emb|CAN66716.1| hypothetical protein VITISV_041185 [Vitis vinifera]

 Score =  240 bits (612), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 112/141 (79%), Positives = 130/141 (92%)

Query: 1   MHPVEPPWLHEFTGVMRNVYGPVTAAKTIYEDEQGYLIIISLPFADLKRVKVTWWNNLTH 60
           +HP+EP W  EF+GVMRNVYGPVTAAKTIYED++G+LIIISLPFADL+RVKVTW N  +H
Sbjct: 337 IHPIEPHWSKEFSGVMRNVYGPVTAAKTIYEDDEGFLIIISLPFADLERVKVTWRNTPSH 396

Query: 61  GVVKISSLSTACMPYIQRNDRTFKLTDPSPEHCPPGEFIREIPLPTRIPDDAKLEAYGDE 120
           G+VKIS +ST CMP+I+R++RTFKLTDP+PEHCPPG+FIREIPLPTRIP+DAKLEAY DE
Sbjct: 397 GIVKISCVSTVCMPFIKRHNRTFKLTDPTPEHCPPGDFIREIPLPTRIPEDAKLEAYRDE 456

Query: 121 TGTGLEIMVPKHRVGPEEHEV 141
           TGT LEI+VPK RVGPEEHEV
Sbjct: 457 TGTMLEIVVPKQRVGPEEHEV 477

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224113455|ref|XP_002332579.1| predicted protein [Populus trichocarpa] gi|222832917|gb|EEE71394.1| predicted protein [Populus trichocarpa]

 Score =  239 bits (609), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 111/140 (79%), Positives = 127/140 (90%)

Query: 2   HPVEPPWLHEFTGVMRNVYGPVTAAKTIYEDEQGYLIIISLPFADLKRVKVTWWNNLTHG 61
           HPVEP WL+EF+GVM+NV GPVTAAKTIYED++ +L+I+SLPFADL+RVKVTW N   HG
Sbjct: 334 HPVEPTWLNEFSGVMKNVNGPVTAAKTIYEDDKAFLVIVSLPFADLQRVKVTWRNTKLHG 393

Query: 62  VVKISSLSTACMPYIQRNDRTFKLTDPSPEHCPPGEFIREIPLPTRIPDDAKLEAYGDET 121
           +VKIS  STACMP+I+R+DRTFKLTDP+PEHCPPGEFIREIPLP  IP+DAKLEAY DET
Sbjct: 394 IVKISCTSTACMPFIKRHDRTFKLTDPTPEHCPPGEFIREIPLPNLIPEDAKLEAYRDET 453

Query: 122 GTGLEIMVPKHRVGPEEHEV 141
           GT LEI+VPKHRVGPEEHEV
Sbjct: 454 GTVLEIIVPKHRVGPEEHEV 473

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224100965|ref|XP_002312087.1| predicted protein [Populus trichocarpa] gi|222851907|gb|EEE89454.1| predicted protein [Populus trichocarpa]

 Score =  238 bits (607), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 110/141 (78%), Positives = 129/141 (91%)

Query: 1   MHPVEPPWLHEFTGVMRNVYGPVTAAKTIYEDEQGYLIIISLPFADLKRVKVTWWNNLTH 60
           +HPVE  WL+EF+GVM+NV GPVTAAKTIYED++ +L+I+SLPFADL+RVKVTW N  +H
Sbjct: 333 IHPVERTWLNEFSGVMKNVNGPVTAAKTIYEDDKAFLVIVSLPFADLQRVKVTWRNTKSH 392

Query: 61  GVVKISSLSTACMPYIQRNDRTFKLTDPSPEHCPPGEFIREIPLPTRIPDDAKLEAYGDE 120
           G+VKIS +STACMP+I+R+DRTFKLTDP+PEHCPPGEFIREIPLP  IP+DAKLEAY DE
Sbjct: 393 GIVKISCISTACMPFIKRHDRTFKLTDPTPEHCPPGEFIREIPLPNLIPEDAKLEAYRDE 452

Query: 121 TGTGLEIMVPKHRVGPEEHEV 141
           TGT LEI+VPKHRVGPEEHEV
Sbjct: 453 TGTVLEIIVPKHRVGPEEHEV 473

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|293334315|ref|NP_001169388.1| uncharacterized protein LOC100383256 [Zea mays] gi|224029025|gb|ACN33588.1| unknown [Zea mays] gi|413947414|gb|AFW80063.1| hypothetical protein ZEAMMB73_001379 [Zea mays]

 Score =  231 bits (588), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 107/140 (76%), Positives = 124/140 (88%)

Query: 2   HPVEPPWLHEFTGVMRNVYGPVTAAKTIYEDEQGYLIIISLPFADLKRVKVTWWNNLTHG 61
           H  EP W+HEFTGV ++  GPVTAAKTIYEDE+GYLI++S+ F+D   VKV+W N LTHG
Sbjct: 386 HAGEPSWMHEFTGVAKHASGPVTAAKTIYEDEEGYLIVVSMLFSDPHSVKVSWRNTLTHG 445

Query: 62  VVKISSLSTACMPYIQRNDRTFKLTDPSPEHCPPGEFIREIPLPTRIPDDAKLEAYGDET 121
           +VKI+ +STA MPYI+R+DRTFKLTDPSPEHCPPGEF+REIPL TRIP+DAK+EAY DET
Sbjct: 446 IVKITCVSTARMPYIKRHDRTFKLTDPSPEHCPPGEFVREIPLATRIPEDAKIEAYYDET 505

Query: 122 GTGLEIMVPKHRVGPEEHEV 141
           GTGLEIMVPKHRVGPEEHEV
Sbjct: 506 GTGLEIMVPKHRVGPEEHEV 525

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|326490744|dbj|BAJ90039.1| predicted protein [Hordeum vulgare subsp. vulgare] gi|326514602|dbj|BAJ96288.1| predicted protein [Hordeum vulgare subsp. vulgare]

 Score =  230 bits (586), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 107/140 (76%), Positives = 123/140 (87%)

Query: 2   HPVEPPWLHEFTGVMRNVYGPVTAAKTIYEDEQGYLIIISLPFADLKRVKVTWWNNLTHG 61
           H  EP W ++FTGVMR+  GPVTAAKTIYED +GYLIIISLPFAD+++VKVTW N LT+G
Sbjct: 386 HTFEPSWNNDFTGVMRHASGPVTAAKTIYEDSKGYLIIISLPFADIQKVKVTWKNTLTNG 445

Query: 62  VVKISSLSTACMPYIQRNDRTFKLTDPSPEHCPPGEFIREIPLPTRIPDDAKLEAYGDET 121
           VVKIS  S   MP+++R+DRTFKLTDPSPEHCPPGEFIRE+PLPTRIP+DA LEAY DE+
Sbjct: 446 VVKISCTSVGRMPFLKRHDRTFKLTDPSPEHCPPGEFIREVPLPTRIPEDATLEAYCDES 505

Query: 122 GTGLEIMVPKHRVGPEEHEV 141
           GTGLEI+VPKHR GPEEHEV
Sbjct: 506 GTGLEIIVPKHRAGPEEHEV 525

Source: Hordeum vulgare subsp. vulgare

Species: Hordeum vulgare

Genus: Hordeum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18399669|ref|NP_566427.1| protein FYD [Arabidopsis thaliana] gi|30682246|ref|NP_850571.1| protein FYD [Arabidopsis thaliana] gi|42572397|ref|NP_974294.1| protein FYD [Arabidopsis thaliana] gi|79313203|ref|NP_001030681.1| protein FYD [Arabidopsis thaliana] gi|12321977|gb|AAG51034.1|AC069474_33 unknown protein; 38387-36918 [Arabidopsis thaliana] gi|13430762|gb|AAK26003.1|AF360293_1 unknown protein [Arabidopsis thaliana] gi|9294372|dbj|BAB02268.1| unnamed protein product [Arabidopsis thaliana] gi|17979095|gb|AAL47491.1| unknown protein [Arabidopsis thaliana] gi|332641693|gb|AEE75214.1| protein FYD [Arabidopsis thaliana] gi|332641694|gb|AEE75215.1| protein FYD [Arabidopsis thaliana] gi|332641695|gb|AEE75216.1| protein FYD [Arabidopsis thaliana] gi|332641696|gb|AEE75217.1| protein FYD [Arabidopsis thaliana]

 Score =  229 bits (584), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 103/141 (73%), Positives = 124/141 (87%)

Query: 1   MHPVEPPWLHEFTGVMRNVYGPVTAAKTIYEDEQGYLIIISLPFADLKRVKVTWWNNLTH 60
           +H  E PW ++F+GVM+NVYGPVTAAKTIYED++G+LI++SLPF D  RVKVTW N   H
Sbjct: 339 IHATELPWSNDFSGVMKNVYGPVTAAKTIYEDDRGFLIVMSLPFVDSGRVKVTWRNTPAH 398

Query: 61  GVVKISSLSTACMPYIQRNDRTFKLTDPSPEHCPPGEFIREIPLPTRIPDDAKLEAYGDE 120
           G+VKIS +STAC P+I+R+DRTFKLTDP+PEHCPPGEF+RE+ LP RIPDDAKLEAY DE
Sbjct: 399 GIVKISCVSTACEPFIKRHDRTFKLTDPTPEHCPPGEFVREVSLPNRIPDDAKLEAYRDE 458

Query: 121 TGTGLEIMVPKHRVGPEEHEV 141
           TGT LE++VPKHR+GPEEHEV
Sbjct: 459 TGTTLEVLVPKHRMGPEEHEV 479

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	149
TAIR|locus:2101227	489	FYD [Arabidopsis thaliana (tax	0.946	0.288	0.730	3.6e-57
TAIR|locus:2040721	494	SLT1 "AT2G37570" [Arabidopsis	0.912	0.275	0.713	1.5e-51
TAIR|locus:2181803	508	AT5G02480 "AT5G02480" [Arabido	0.939	0.275	0.612	7.1e-45

TAIR|locus:2101227 FYD [Arabidopsis thaliana (taxid:3702)]

 Score = 588 (212.0 bits), Expect = 3.6e-57, P = 3.6e-57
 Identities = 103/141 (73%), Positives = 124/141 (87%)

Query:     1 MHPVEPPWLHEFTGVMRNVYGPVTAAKTIYEDEQGYLIIISLPFADLKRVKVTWWNNLTH 60
             +H  E PW ++F+GVM+NVYGPVTAAKTIYED++G+LI++SLPF D  RVKVTW N   H
Sbjct:   339 IHATELPWSNDFSGVMKNVYGPVTAAKTIYEDDRGFLIVMSLPFVDSGRVKVTWRNTPAH 398

Query:    61 GVVKISSLSTACMPYIQRNDRTFKLTDPSPEHCPPGEFIREIPLPTRIPDDAKLEAYGDE 120
             G+VKIS +STAC P+I+R+DRTFKLTDP+PEHCPPGEF+RE+ LP RIPDDAKLEAY DE
Sbjct:   399 GIVKISCVSTACEPFIKRHDRTFKLTDPTPEHCPPGEFVREVSLPNRIPDDAKLEAYRDE 458

Query:   121 TGTGLEIMVPKHRVGPEEHEV 141
             TGT LE++VPKHR+GPEEHEV
Sbjct:   459 TGTTLEVLVPKHRMGPEEHEV 479

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0006487 "protein N-linked glycosylation" evidence=RCA

GO:0009408 "response to heat" evidence=RCA

GO:0009644 "response to high light intensity" evidence=RCA

GO:0042542 "response to hydrogen peroxide" evidence=RCA

TAIR|locus:2040721 SLT1 "AT2G37570" [Arabidopsis thaliana (taxid:3702)]

 Score = 535 (193.4 bits), Expect = 1.5e-51, P = 1.5e-51
 Identities = 97/136 (71%), Positives = 115/136 (84%)

Query:     6 PPWLHEFTGVMRNVYGPVTAAKTIYEDEQGYLIIISLPFADLKRVKVTWWNNLTHGVVKI 65
             P W +EFTG M+NVYGPVTAAKTIYEDE+GYLIIISLPF DL  VKV+W N LTHG++K+
Sbjct:   343 PTWSNEFTGAMKNVYGPVTAAKTIYEDEEGYLIIISLPFVDLNSVKVSWRNTLTHGIIKV 402

Query:    66 SSLSTACMPYIQRNDRTFKLTDPSPEHCPPGEFIREIPLPTRIPDDAKLEAYGDETGTGL 125
             S LST+ +P+I+R+DRTFKLTD + EHCPPGEF+REIPL  RIP+DA +EAY D  G+ L
Sbjct:   403 SCLSTSRVPFIKRHDRTFKLTDSASEHCPPGEFVREIPLSNRIPEDANIEAYYDGPGSVL 462

Query:   126 EIMVPKHRVGPEEHEV 141
             EI+VPK R GPEEHEV
Sbjct:   463 EILVPKLRAGPEEHEV 478

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0042538 "hyperosmotic salinity response" evidence=IMP

GO:0009408 "response to heat" evidence=RCA

GO:0009644 "response to high light intensity" evidence=RCA

GO:0042542 "response to hydrogen peroxide" evidence=RCA

TAIR|locus:2181803 AT5G02480 "AT5G02480" [Arabidopsis thaliana (taxid:3702)]

 Score = 472 (171.2 bits), Expect = 7.1e-45, P = 7.1e-45
 Identities = 87/142 (61%), Positives = 112/142 (78%)

Query:     2 HPVEPP-WLHEFTGVMRNVYGPVTAAKTIYEDEQGYLIIISLPFADLKRVKVTWWNNLTH 60
             H  +PP W+++FTGVM+N  GPVTAAKT+YEDE+ YL++I+LPF DL  VKV+W NN+T+
Sbjct:   357 HAKDPPSWVNDFTGVMKNSCGPVTAAKTVYEDEEAYLVVITLPFVDLNTVKVSWRNNITN 416

Query:    61 GVVKISSLSTACMPYIQRNDRTFKLTDPSPEHCPPGEFIREIPLPTRIPDDAKLEAYGDE 120
             G+VK++ LST+   +++R DRTFKL D   EHCPPGEF+REI LP RIP++A +EAY D 
Sbjct:   417 GIVKVTGLSTSRASFVKRRDRTFKLVDQMAEHCPPGEFMREIQLPNRIPEEANIEAYFDG 476

Query:   121 TGTGLEIMVPKHRVG-PEEHEV 141
             TG  LEI+VPK R G  EEHEV
Sbjct:   477 TGPVLEIVVPKLRGGVEEEHEV 498


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.138   0.437    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      149       149   0.00078  104 3  11 22  0.50    31
                                                     30  0.39    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  591 (63 KB)
  Total size of DFA:  156 KB (2093 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  15.60u 0.09s 15.69t   Elapsed:  00:00:02
  Total cpu time:  15.60u 0.09s 15.69t   Elapsed:  00:00:02
  Start:  Fri May 10 10:21:18 2013   End:  Fri May 10 10:21:20 2013

GO:0005575 "cellular_component" evidence=ND

GO:0009408 "response to heat" evidence=RCA

GO:0009644 "response to high light intensity" evidence=RCA

GO:0042542 "response to hydrogen peroxide" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	149
cd06464	88	cd06464, ACD_sHsps-like, Alpha-crystallin domain (	0.001

>gnl|CDD|107221 cd06464, ACD_sHsps-like, Alpha-crystallin domain (ACD) of alpha-crystallin-type small(s) heat shock proteins (Hsps)

 Score = 35.6 bits (83), Expect = 0.001
 Identities = 25/104 (24%), Positives = 42/104 (40%), Gaps = 18/104 (17%)

Query: 29  IYEDEQGYLIIISLPFADLKRVKVTWWNNLTHGVVKISSLSTACMPYIQRNDRTFKLTDP 88
           +YE +  Y++   LP    + +KV     +  GV+ IS          +R +   +  + 
Sbjct: 2   VYETDDAYVVEADLPGFKKEDIKVE----VEDGVLTISG---------EREEEEEEEENY 48

Query: 89  SPEHCPPGEFIREIPLPTRIPDDAKLEA-YGDETGTGLEIMVPK 131
                  G F R   LP  + D  K++A   +  G  L I +PK
Sbjct: 49  LRRERSYGSFSRSFRLPEDV-DPDKIKASLEN--GV-LTITLPK 88

sHsps are small stress induced proteins with monomeric masses between 12 -43 kDa, whose common feature is the Alpha-crystallin domain (ACD). sHsps are generally active as large oligomers consisting of multiple subunits, and are believed to be ATP-independent chaperones that prevent aggregation and are important in refolding in combination with other Hsps. Length = 88

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	149
cd06464	88	ACD_sHsps-like Alpha-crystallin domain (ACD) of al	99.36
PF00011	102	HSP20: Hsp20/alpha crystallin family This prints e	98.98
cd06471	93	ACD_LpsHSP_like Group of bacterial proteins contai	98.88
cd06472	92	ACD_ScHsp26_like Alpha crystallin domain (ACD) fou	98.87
cd06497	86	ACD_alphaA-crystallin_HspB4 Alpha-crystallin domai	98.5
cd06475	86	ACD_HspB1_like Alpha crystallin domain (ACD) found	98.39
cd00298	80	ACD_sHsps_p23-like This domain family includes the	98.36
cd06478	83	ACD_HspB4-5-6 Alpha-crystallin domain found in alp	98.31
cd06526	83	metazoan_ACD Alpha-crystallin domain (ACD) of meta	98.23
cd06498	84	ACD_alphaB-crystallin_HspB5 Alpha-crystallin domai	98.19
PRK11597	142	heat shock chaperone IbpB; Provisional	98.18
PRK10743	137	heat shock protein IbpA; Provisional	98.15
cd06470	90	ACD_IbpA-B_like Alpha-crystallin domain (ACD) foun	98.13
COG0071	146	IbpA Molecular chaperone (small heat shock protein	98.03
cd06476	83	ACD_HspB2_like Alpha crystallin domain (ACD) found	97.93
cd06479	81	ACD_HspB7_like Alpha crystallin domain (ACD) found	97.73
cd06482	87	ACD_HspB10 Alpha crystallin domain (ACD) found in	97.44
cd06477	83	ACD_HspB3_Like Alpha crystallin domain (ACD) found	97.4
cd06481	87	ACD_HspB9_like Alpha crystallin domain (ACD) found	97.21
cd06469	78	p23_DYX1C1_like p23_like domain found in proteins	96.48
KOG0710	196	consensus Molecular chaperone (small heat-shock pr	95.94
cd06463	84	p23_like Proteins containing this p23_like domain	95.93
cd06480	91	ACD_HspB8_like Alpha-crystallin domain (ACD) found	94.79
cd06466	84	p23_CS_SGT1_like p23_like domain similar to the C-	88.1

>cd06464 ACD_sHsps-like Alpha-crystallin domain (ACD) of alpha-crystallin-type small(s) heat shock proteins (Hsps)

Probab=99.36  E-value=2.3e-12  Score=82.84  Aligned_cols=88  Identities=27%  Similarity=0.378  Sum_probs=75.0

Q ss_pred             eeeecCceEEEEEecccccccceeEEEeecCCCceEEEEeEecCCcceeeeccceEEeeCCCCCCCCCCceeEEeeCCCC
Q 031993           28 TIYEDEQGYLIIISLPFADLKRVKVTWWNNLTHGVVKISSLSTACMPYIQRNDRTFKLTDPSPEHCPPGEFIREIPLPTR  107 (149)
Q Consensus        28 tIyEde~gYLi~iSLPfvd~~~vkvswrNt~thGivKI~cvST~~~p~ikRhdRtFkLtdps~ehCPPGeFvreipL~tr  107 (149)
                      .|+|++++|.|.+.||+++.+.++|++.+    +.+.|++..........         ......|..|+|.|+|+||..
T Consensus         1 ~i~e~~~~~~i~~~lpg~~~~~i~V~v~~----~~l~I~g~~~~~~~~~~---------~~~~~~~~~~~f~r~~~LP~~   67 (88)
T cd06464           1 DVYETDDAYVVEADLPGFKKEDIKVEVED----GVLTISGEREEEEEEEE---------NYLRRERSYGSFSRSFRLPED   67 (88)
T ss_pred             CcEEcCCEEEEEEECCCCCHHHeEEEEEC----CEEEEEEEEecccccCC---------cEEEEEEeCcEEEEEEECCCC
Confidence            47999999999999999999999999997    88999988776555433         223456788999999999999


Q ss_pred             CCCcccceeeecCCCceEEEeeec
Q 031993          108 IPDDAKLEAYGDETGTGLEIMVPK  131 (149)
Q Consensus       108 IPedA~leAy~de~g~~LEi~VpK  131 (149)
                      +-.+ ++.|.|+. | +|+|.+||
T Consensus        68 vd~~-~i~a~~~~-G-~L~I~~pk   88 (88)
T cd06464          68 VDPD-KIKASLEN-G-VLTITLPK   88 (88)
T ss_pred             cCHH-HcEEEEeC-C-EEEEEEcC
Confidence            9887 89999999 5 59999997

sHsps are small stress induced proteins with monomeric masses between 12 -43 kDa, whose common feature is the Alpha-crystallin domain (ACD). sHsps are generally active as large oligomers consisting of multiple subunits, and are believed to be ATP-independent chaperones that prevent aggregation and are important in refolding in combination with other Hsps.

>PF00011 HSP20: Hsp20/alpha crystallin family This prints entry is a subset of the Pfam entry

Probab=98.98  E-value=2.6e-08  Score=67.52  Aligned_cols=93  Identities=31%  Similarity=0.428  Sum_probs=68.3

Q ss_pred             eeeecCceEEEEEecccccccceeEEEeecCCCceEEEEeEecCCcceeeeccceEEeeCCCCCCCCCCceeEEeeCCCC
Q 031993           28 TIYEDEQGYLIIISLPFADLKRVKVTWWNNLTHGVVKISSLSTACMPYIQRNDRTFKLTDPSPEHCPPGEFIREIPLPTR  107 (149)
Q Consensus        28 tIyEde~gYLi~iSLPfvd~~~vkvswrNt~thGivKI~cvST~~~p~ikRhdRtFkLtdps~ehCPPGeFvreipL~tr  107 (149)
                      +|+|+++.|+|.+.||.++.+.++|+-.    ++.+.|++--.    .....++.+.-      -...|.|.|+|+||..
T Consensus         1 di~e~~~~~~i~~~lpG~~~edi~I~~~----~~~L~I~g~~~----~~~~~~~~~~~------~~~~~~f~r~~~lP~~   66 (102)
T PF00011_consen    1 DIKEDEDEYIIKVDLPGFDKEDIKIKVD----DNKLVISGKRK----EEEEDDRYYRS------ERRYGSFERSIRLPED   66 (102)
T ss_dssp             EEEESSSEEEEEEE-TTS-GGGEEEEEE----TTEEEEEEEEE----GEECTTCEEEE-------S-SEEEEEEEE-STT
T ss_pred             CeEECCCEEEEEEECCCCChHHEEEEEe----cCccceeceee----eeeeeeeeeec------ccccceEEEEEcCCCc
Confidence            5899999999999999999999999876    46788988766    33333333332      2467999999999987


Q ss_pred             CCCcccceeeecCCCceEEEeeecCcCCCc
Q 031993          108 IPDDAKLEAYGDETGTGLEIMVPKHRVGPE  137 (149)
Q Consensus       108 IPedA~leAy~de~g~~LEi~VpK~r~gpE  137 (149)
                      + +-.+++|-| +.| +|.|.+||......
T Consensus        67 v-d~~~i~a~~-~~G-vL~I~~pk~~~~~~   93 (102)
T PF00011_consen   67 V-DPDKIKASY-ENG-VLTITIPKKEEEED   93 (102)
T ss_dssp             B--GGG-EEEE-TTS-EEEEEEEBSSSCTT
T ss_pred             C-CcceEEEEe-cCC-EEEEEEEccccccC
Confidence            7 456789999 777 69999999977654

; InterPro: IPR002068 Prokaryotic and eukaryotic organisms respond to heat shock or other environmental stress by inducing the synthesis of proteins collectively known as heat-shock proteins (hsp) []. Amongst them is a family of proteins with an average molecular weight of 20 Kd, known as the hsp20 proteins []. These seem to act as chaperones that can protect other proteins against heat-induced denaturation and aggregation. Hsp20 proteins seem to form large heterooligomeric aggregates. Structurally, this family is characterised by the presence of a conserved C-terminal domain of about 100 residues.; PDB: 2BOL_B 3N3E_B 2H50_P 2H53_F 2BYU_L 1GME_D 3VQM_J 3VQK_E 3VQL_A 3AAC_A ....

>cd06471 ACD_LpsHSP_like Group of bacterial proteins containing an alpha crystallin domain (ACD) similar to Lactobacillus plantarum (Lp) small heat shock proteins (sHsp) HSP 18

Probab=98.88  E-value=2.8e-08  Score=67.43  Aligned_cols=92  Identities=22%  Similarity=0.352  Sum_probs=65.5

Q ss_pred             eeeeeecCceEEEEEecccccccceeEEEeecCCCceEEEEeEecCCcceeeeccceEEeeCCCCCCCCCCceeEEeeCC
Q 031993           26 AKTIYEDEQGYLIIISLPFADLKRVKVTWWNNLTHGVVKISSLSTACMPYIQRNDRTFKLTDPSPEHCPPGEFIREIPLP  105 (149)
Q Consensus        26 AktIyEde~gYLi~iSLPfvd~~~vkvswrNt~thGivKI~cvST~~~p~ikRhdRtFkLtdps~ehCPPGeFvreipL~  105 (149)
                      +.+|+|++++|.|.+.||+++.+.++|+..    .+.+.|++-......--..+.+...      .-..-|.|.|.|+||
T Consensus         2 ~~di~e~~~~~~i~~~lPGv~~edi~v~~~----~~~L~I~g~~~~~~~~~~~~~~~~~------~e~~~g~f~r~~~lp   71 (93)
T cd06471           2 KTDIKETDDEYIVEADLPGFKKEDIKLDYK----DGYLTISAKRDESKDEKDKKGNYIR------RERYYGSFSRSFYLP   71 (93)
T ss_pred             ceeEEEcCCEEEEEEECCCCCHHHeEEEEE----CCEEEEEEEEccccccccccCCEEE------EeeeccEEEEEEECC
Confidence            468999999999999999999999999886    4688888876542211001111111      012569999999999


Q ss_pred             CCCCCcccceeeecCCCceEEEeeec
Q 031993          106 TRIPDDAKLEAYGDETGTGLEIMVPK  131 (149)
Q Consensus       106 trIPedA~leAy~de~g~~LEi~VpK  131 (149)
                       .+=. .++.|-|+ .| +|+|-+||
T Consensus        72 -~v~~-~~i~A~~~-dG-vL~I~lPK   93 (93)
T cd06471          72 -NVDE-EEIKAKYE-NG-VLKITLPK   93 (93)
T ss_pred             -CCCH-HHCEEEEE-CC-EEEEEEcC
Confidence             4422 34899994 45 69999998

5, HSP 18.55 and HSP 19.3. sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Transcription of the genes encoding Lp HSP 18.5, 18.55 and 19.3 is regulated by a variety of stresses including heat, cold and ethanol. Early growing L. plantarum cells contain elevated levels of these mRNAs which rapidly fall of as the cells enter stationary phase. Also belonging to this group is Bifidobacterium breve (Bb) HSP20 and Oenococcus oenis (syn. Leuconostoc oenos) (Oo) HSP18. Transcription of the gene encoding BbHSP20 is strongly induced following heat or osmotic shock, and that of the gene encoding OoHSP18 following heat, ethanol or acid shock. OoHSP18 is peripherally associated with the cytoplasmic me

>cd06472 ACD_ScHsp26_like Alpha crystallin domain (ACD) found in Saccharomyces cerevisiae (Sc) small heat shock protein (Hsp)26 and similar proteins

Probab=98.87  E-value=3.7e-08  Score=67.29  Aligned_cols=91  Identities=23%  Similarity=0.324  Sum_probs=66.7

Q ss_pred             eeeeecCceEEEEEecccccccceeEEEeecCCCceEEEEeEecCCcceeeeccceEEeeCCCCCCCCCCceeEEeeCCC
Q 031993           27 KTIYEDEQGYLIIISLPFADLKRVKVTWWNNLTHGVVKISSLSTACMPYIQRNDRTFKLTDPSPEHCPPGEFIREIPLPT  106 (149)
Q Consensus        27 ktIyEde~gYLi~iSLPfvd~~~vkvswrNt~thGivKI~cvST~~~p~ikRhdRtFkLtdps~ehCPPGeFvreipL~t  106 (149)
                      .+|||+++.|.|.+.||.++.+.++|+..|.   +.+.|++-...-..  ..+++....     | ..-|.|.|+|+||.
T Consensus         2 ~dv~E~~~~~~i~~~lPGv~~edi~i~v~~~---~~L~I~g~~~~~~~--~~~~~~~~~-----e-~~~g~f~r~i~LP~   70 (92)
T cd06472           2 VDWKETPEAHVFKADVPGVKKEDVKVEVEDG---RVLRISGERKKEEE--KKGDDWHRV-----E-RSSGRFVRRFRLPE   70 (92)
T ss_pred             ccEEEcCCeEEEEEECCCCChHhEEEEEeCC---CEEEEEEEeccccc--ccCCCEEEE-----E-EeccEEEEEEECCC
Confidence            4799999999999999999999999988632   57889886542211  112222211     1 24699999999999


Q ss_pred             CCCCcccceeeecCCCceEEEeeec
Q 031993          107 RIPDDAKLEAYGDETGTGLEIMVPK  131 (149)
Q Consensus       107 rIPedA~leAy~de~g~~LEi~VpK  131 (149)
                      .+-.+ +++|-|+.  -+|+|-+||
T Consensus        71 ~v~~~-~i~A~~~n--GvL~I~lPK   92 (92)
T cd06472          71 NADAD-EVKAFLEN--GVLTVTVPK   92 (92)
T ss_pred             CCCHH-HCEEEEEC--CEEEEEecC
Confidence            88443 57788864  469999998

sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. ScHsp26 is temperature-regulated, it switches from an inactive to a chaperone-active form upon elevation in temperature. It associates into large 24-mers storage forms which upon heat shock disassociate into dimers. These dimers initiate the interaction with non-native substrate proteins and re-assemble into large globular assemblies having one monomer of substrate bound per dimer. This group also contains Arabidopsis thaliana (Ath) Hsp15.7, a peroxisomal matrix protein which can complement the morphological phenotype of S. cerevisiae mutants deficient in Hsps26. AthHsp15.7 is minimally expressed under normal conditions and is strongly induced by heat and oxidative st

>cd06497 ACD_alphaA-crystallin_HspB4 Alpha-crystallin domain found in the small heat shock protein (sHsp) alphaA-crystallin (HspB4, 20kDa)

Probab=98.50  E-value=1.9e-06  Score=59.86  Aligned_cols=83  Identities=19%  Similarity=0.302  Sum_probs=63.6

Q ss_pred             eeeecCceEEEEEecccccccceeEEEeecCCCceEEEEeEecCCcceeeeccceEEeeCCCCCCCCCCceeEEeeCCCC
Q 031993           28 TIYEDEQGYLIIISLPFADLKRVKVTWWNNLTHGVVKISSLSTACMPYIQRNDRTFKLTDPSPEHCPPGEFIREIPLPTR  107 (149)
Q Consensus        28 tIyEde~gYLi~iSLPfvd~~~vkvswrNt~thGivKI~cvST~~~p~ikRhdRtFkLtdps~ehCPPGeFvreipL~tr  107 (149)
                      .|+|++++|.|.+-||.++.+.++|+-.    +|.+.|++-....    + .+..|-..          ||.|.|.||..
T Consensus         4 ~v~e~~~~~~v~~dlpG~~~edi~V~v~----~~~L~I~g~~~~~----~-~~~~~~~~----------ef~R~~~LP~~   64 (86)
T cd06497           4 EVRSDRDKFTIYLDVKHFSPEDLTVKVL----DDYVEIHGKHSER----Q-DDHGYISR----------EFHRRYRLPSN   64 (86)
T ss_pred             eEEEcCCEEEEEEECCCCCHHHeEEEEE----CCEEEEEEEEcce----e-CCCCEEEE----------EEEEEEECCCC
Confidence            5899999999999999999999999776    5789999853221    1 11222211          59999999887


Q ss_pred             CCCcccceeeecCCCceEEEeeec
Q 031993          108 IPDDAKLEAYGDETGTGLEIMVPK  131 (149)
Q Consensus       108 IPedA~leAy~de~g~~LEi~VpK  131 (149)
                      +-.| +++|-|.+.|- |.|-+||
T Consensus        65 Vd~~-~i~A~~~~dGv-L~I~~PK   86 (86)
T cd06497          65 VDQS-AITCSLSADGM-LTFSGPK   86 (86)
T ss_pred             CChH-HeEEEeCCCCE-EEEEecC
Confidence            7543 58999977775 9999998

sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Alpha crystallin, an abundant protein in the mammalian lens, is a large (700 kDa) heteropolymer composed of HspB4 and HspB5, generally in a molar ratio of HspB4:HspB5 of 3:1. Only trace amounts of HspB4 are found in tissues other than the lens. HspB5 does not belong to this group. Mutations inHspB4 have been associated with Autosomal Dominant Congenital Cataract (ADCC). The chaperone-like functions of HspB4 are considered important for maintaining lens transparency and preventing cataract.

>cd06475 ACD_HspB1_like Alpha crystallin domain (ACD) found in mammalian small (s)heat shock protein (Hsp)-27 (also denoted HspB1 in human) and similar proteins

Probab=98.39  E-value=5.2e-06  Score=57.66  Aligned_cols=85  Identities=16%  Similarity=0.254  Sum_probs=65.4

Q ss_pred             eeeeeeecCceEEEEEecccccccceeEEEeecCCCceEEEEeEecCCcceeeeccceEEeeCCCCCCCCCCceeEEeeC
Q 031993           25 AAKTIYEDEQGYLIIISLPFADLKRVKVTWWNNLTHGVVKISSLSTACMPYIQRNDRTFKLTDPSPEHCPPGEFIREIPL  104 (149)
Q Consensus        25 aAktIyEde~gYLi~iSLPfvd~~~vkvswrNt~thGivKI~cvST~~~p~ikRhdRtFkLtdps~ehCPPGeFvreipL  104 (149)
                      +|-.|||++++|.|.+-||.++.+.++|+=.    .+.+.|++-.....     .+..|-        +  ++|.|.|.|
T Consensus         1 ~~~~i~e~~~~~~v~~dlPG~~~edi~V~v~----~~~L~I~g~~~~~~-----~~~~~~--------~--~~f~R~f~L   61 (86)
T cd06475           1 GMSEIRQTADRWKVSLDVNHFAPEELVVKTK----DGVVEITGKHEEKQ-----DEHGFV--------S--RCFTRKYTL   61 (86)
T ss_pred             CcceEEEcCCeEEEEEECCCCCHHHEEEEEE----CCEEEEEEEECcCc-----CCCCEE--------E--EEEEEEEEC
Confidence            4668999999999999999999999999875    46888888653221     112221        1  389999999


Q ss_pred             CCCCCCcccceeeecCCCceEEEeee
Q 031993          105 PTRIPDDAKLEAYGDETGTGLEIMVP  130 (149)
Q Consensus       105 ~trIPedA~leAy~de~g~~LEi~Vp  130 (149)
                      |..|-. .+++|=|++.|- |.|.+|
T Consensus        62 P~~vd~-~~v~A~~~~dGv-L~I~lP   85 (86)
T cd06475          62 PPGVDP-TAVTSSLSPDGI-LTVEAP   85 (86)
T ss_pred             CCCCCH-HHcEEEECCCCe-EEEEec
Confidence            988854 478898887775 999887

sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Hsp27 shows enhanced synthesis in response to stress. It is a molecular chaperone which interacts with a large number of different proteins. It is found in many types of human cells including breast, uterus, cervix, platelets and cancer cells. Hsp27 has diverse cellular functions including, chaperoning, regulation of actin polymerization, keratinocyte differentiation, regulation of inflammatory pathways in keratinocytes, and protection from oxidative stress through modulating glutathione levels. It is also a subunit of AUF1-containing protein complexes. It has been linked to several transduction pathways regulating cellular functions including differentiat

>cd00298 ACD_sHsps_p23-like This domain family includes the alpha-crystallin domain (ACD) of alpha-crystallin-type small heat shock proteins (sHsps) and a similar domain found in p23-like proteins

Probab=98.36  E-value=5.9e-06  Score=49.97  Aligned_cols=80  Identities=26%  Similarity=0.356  Sum_probs=65.6

Q ss_pred             eeecCceEEEEEecccccccceeEEEeecCCCceEEEEeEecCCcceeeeccceEEeeCCCCCCCCCCceeEEeeCCCCC
Q 031993           29 IYEDEQGYLIIISLPFADLKRVKVTWWNNLTHGVVKISSLSTACMPYIQRNDRTFKLTDPSPEHCPPGEFIREIPLPTRI  108 (149)
Q Consensus        29 IyEde~gYLi~iSLPfvd~~~vkvswrNt~thGivKI~cvST~~~p~ikRhdRtFkLtdps~ehCPPGeFvreipL~trI  108 (149)
                      .++.++.|.|.|.||.+..+.++|.-.+    +.+.|++.......                ..++.+.|.+++.||..|
T Consensus         1 ~~q~~~~v~i~i~~~~~~~~~i~v~~~~----~~l~v~~~~~~~~~----------------~~~~~~~~~~~~~L~~~i   60 (80)
T cd00298           1 WYQTDDEVVVTVDLPGVKKEDIKVEVED----NVLTISGKREEEEE----------------RERSYGEFERSFELPEDV   60 (80)
T ss_pred             CEEcCCEEEEEEECCCCCHHHeEEEEEC----CEEEEEEEEcCCCc----------------ceEeeeeEEEEEECCCCc
Confidence            3688899999999999999999998875    67888876554444                456789999999999999


Q ss_pred             CCcccceeeecCCCceEEEeeec
Q 031993          109 PDDAKLEAYGDETGTGLEIMVPK  131 (149)
Q Consensus       109 PedA~leAy~de~g~~LEi~VpK  131 (149)
                      -.+ ++.|-++.  ..|+|.+||
T Consensus        61 ~~~-~~~~~~~~--~~l~i~l~K   80 (80)
T cd00298          61 DPE-KSKASLEN--GVLEITLPK   80 (80)
T ss_pred             CHH-HCEEEEEC--CEEEEEEcC
Confidence            877 67777776  559999987

sHsps are small stress induced proteins with monomeric masses between 12 -43 kDa, whose common feature is this ACD. sHsps are generally active as large oligomers consisting of multiple subunits, and are believed to be ATP-independent chaperones that prevent aggregation and are important in refolding in combination with other Hsps. p23 is a cochaperone of the Hsp90 chaperoning pathway. It binds Hsp90 and participates in the folding of a number of Hsp90 clients including the progesterone receptor. p23 also has a passive chaperoning activity. p23 in addition may act as the cytosolic prostaglandin E2 synthase. Included in this family is the p23-like C-terminal CHORD-SGT1 (CS) domain of suppressor of G2 allele of Skp1 (Sgt1) and the p23-like domains of human butyrate-induced transcript 1 (hB-ind

>cd06478 ACD_HspB4-5-6 Alpha-crystallin domain found in alphaA-crystallin (HspB4), alphaB-crystallin (HspB5), and the small heat shock protein (sHsp) HspB6, also known as Hsp20

Probab=98.31  E-value=8.6e-06  Score=55.96  Aligned_cols=82  Identities=17%  Similarity=0.271  Sum_probs=61.2

Q ss_pred             eeecCceEEEEEecccccccceeEEEeecCCCceEEEEeEecCCcceeeeccceEEeeCCCCCCCCCCceeEEeeCCCCC
Q 031993           29 IYEDEQGYLIIISLPFADLKRVKVTWWNNLTHGVVKISSLSTACMPYIQRNDRTFKLTDPSPEHCPPGEFIREIPLPTRI  108 (149)
Q Consensus        29 IyEde~gYLi~iSLPfvd~~~vkvswrNt~thGivKI~cvST~~~p~ikRhdRtFkLtdps~ehCPPGeFvreipL~trI  108 (149)
                      |.+++++|.|.+-||.++.+.++|+=.    ++.+.|++-....     ..+..|-        |  -||.|.|+||..+
T Consensus         2 ~~~~~~~~~v~~dlpG~~~edI~V~v~----~~~L~I~g~~~~~-----~~~~~~~--------~--~ef~R~~~LP~~v   62 (83)
T cd06478           2 VRLDKDRFSVNLDVKHFSPEELSVKVL----GDFVEIHGKHEER-----QDEHGFI--------S--REFHRRYRLPPGV   62 (83)
T ss_pred             eeecCceEEEEEECCCCCHHHeEEEEE----CCEEEEEEEEceE-----cCCCCEE--------E--EEEEEEEECCCCc
Confidence            679999999999999999999999766    4788898853321     1111121        1  1599999998876


Q ss_pred             CCcccceeeecCCCceEEEeeec
Q 031993          109 PDDAKLEAYGDETGTGLEIMVPK  131 (149)
Q Consensus       109 PedA~leAy~de~g~~LEi~VpK  131 (149)
                      -.| ++.|-|.+.|- |.|-+||
T Consensus        63 d~~-~i~A~~~~dGv-L~I~~PK   83 (83)
T cd06478          63 DPA-AITSSLSADGV-LTISGPR   83 (83)
T ss_pred             ChH-HeEEEECCCCE-EEEEecC
Confidence            443 57888877775 9999997

sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Alpha crystallin, an abundant protein in the mammalian lens, is a large (700 kDa) heteropolymer composed of HspB4 and HspB5, generally in a molar ratio of HspB4:HspB5 of 3:1. Only trace amounts of HspB4 are found in tissues other than the lens. HspB5 on the other hand is also expressed constitutively in other tissues including brain, heart, and type I and type IIa skeletal muscle fibers, and in several cancers including gliomas, renal cell carcinomas, basal-like and metaplastic breast carcinomas, and head and neck cancer. HspB5's functions include effects on the apoptotic pathway and on metastasis. Phosphorylation of HspB5 reduces its ol

>cd06526 metazoan_ACD Alpha-crystallin domain (ACD) of metazoan alpha-crystallin-type small(s) heat shock proteins (Hsps)

Probab=98.23  E-value=1e-05  Score=54.48  Aligned_cols=79  Identities=16%  Similarity=0.252  Sum_probs=60.9

Q ss_pred             cCceEEEEEecccccccceeEEEeecCCCceEEEEeEecCCcceeeeccceEEeeCCCCCCCCCCceeEEeeCCCCCCCc
Q 031993           32 DEQGYLIIISLPFADLKRVKVTWWNNLTHGVVKISSLSTACMPYIQRNDRTFKLTDPSPEHCPPGEFIREIPLPTRIPDD  111 (149)
Q Consensus        32 de~gYLi~iSLPfvd~~~vkvswrNt~thGivKI~cvST~~~p~ikRhdRtFkLtdps~ehCPPGeFvreipL~trIPed  111 (149)
                      +.++|.+.+-||.+..+.++|+-.|    +.+.|++-......     +..+          --|+|.|+|+||..+=. 
T Consensus         5 ~~~~~~v~~dlpG~~~edI~v~v~~----~~L~I~g~~~~~~~-----~~~~----------~~~~f~r~~~LP~~vd~-   64 (83)
T cd06526           5 DDEKFQVTLDVKGFKPEELKVKVSD----NKLVVEGKHEERED-----EHGY----------VSREFTRRYQLPEGVDP-   64 (83)
T ss_pred             cCeeEEEEEECCCCCHHHcEEEEEC----CEEEEEEEEeeecc-----CCCE----------EEEEEEEEEECCCCCCh-
Confidence            3469999999999999999998875    78999987655433     1112          12899999999988744 


Q ss_pred             ccceeeecCCCceEEEeeec
Q 031993          112 AKLEAYGDETGTGLEIMVPK  131 (149)
Q Consensus       112 A~leAy~de~g~~LEi~VpK  131 (149)
                      .++.|.|+..| +|+|-+||
T Consensus        65 ~~i~A~~~~~G-vL~I~~Pk   83 (83)
T cd06526          65 DSVTSSLSSDG-VLTIEAPK   83 (83)
T ss_pred             HHeEEEeCCCc-EEEEEecC
Confidence            45789998755 49999997

sHsps are small stress induced proteins with monomeric masses between 12 -43 kDa, whose common feature is the Alpha-crystallin domain (ACD). sHsps are generally active as large oligomers consisting of multiple subunits, and are believed to be ATP-independent chaperones that prevent aggregation and are important in refolding in combination with other Hsps.

>cd06498 ACD_alphaB-crystallin_HspB5 Alpha-crystallin domain found in the small heat shock protein (sHsp) alphaB-crystallin (HspB5, 20kDa)

Probab=98.19  E-value=2.5e-05  Score=54.17  Aligned_cols=83  Identities=13%  Similarity=0.261  Sum_probs=63.6

Q ss_pred             eeecCceEEEEEecccccccceeEEEeecCCCceEEEEeEecCCcceeeeccceEEeeCCCCCCCCCCceeEEeeCCCCC
Q 031993           29 IYEDEQGYLIIISLPFADLKRVKVTWWNNLTHGVVKISSLSTACMPYIQRNDRTFKLTDPSPEHCPPGEFIREIPLPTRI  108 (149)
Q Consensus        29 IyEde~gYLi~iSLPfvd~~~vkvswrNt~thGivKI~cvST~~~p~ikRhdRtFkLtdps~ehCPPGeFvreipL~trI  108 (149)
                      +++++++|.+.+-||.++...++|+-.    ++.+.|++-.....     .+..|-          -++|.|.|.||..+
T Consensus         2 ~~~~~~~~~v~~dlpG~~~edi~V~v~----~~~L~I~g~~~~~~-----~~~~~~----------~~eF~R~~~LP~~v   62 (84)
T cd06498           2 MRLEKDKFSVNLDVKHFSPEELKVKVL----GDFIEIHGKHEERQ-----DEHGFI----------SREFQRKYRIPADV   62 (84)
T ss_pred             eEeCCceEEEEEECCCCCHHHeEEEEE----CCEEEEEEEEccee-----CCCCEE----------EEEEEEEEECCCCC
Confidence            578999999999999999999999866    56888988532111     111121          13699999999988


Q ss_pred             CCcccceeeecCCCceEEEeeecC
Q 031993          109 PDDAKLEAYGDETGTGLEIMVPKH  132 (149)
Q Consensus       109 PedA~leAy~de~g~~LEi~VpK~  132 (149)
                      -. .+++|-|+..|- |.|-+||.
T Consensus        63 d~-~~i~A~~~~dGv-L~I~lPk~   84 (84)
T cd06498          63 DP-LTITSSLSPDGV-LTVCGPRK   84 (84)
T ss_pred             Ch-HHcEEEeCCCCE-EEEEEeCC
Confidence            55 468999987775 99999984

sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Alpha crystallin, an abundant protein in the mammalian lens, is a large (700 kDa) heteropolymer composed of HspB4 and HspB5, generally in a molar ratio of HspB4:HspB5 of 3:1. HspB4 does not belong to this group. HspB5 shows increased synthesis in response to stress. HspB5 is also expressed constitutively in other tissues including brain, heart, and type I and type IIa skeletal muscle fibers, and in several cancers including gliomas, renal cell carcinomas, basal-like and metaplastic breast carcinomas, and head and neck cancer. Its functions include effects on the apoptotic pathway and on metastasis. Phosphorylation of HspB5 reduces its oligomerization and anti-apoptotic activ

>PRK11597 heat shock chaperone IbpB; Provisional

Probab=98.18  E-value=4.2e-05  Score=58.58  Aligned_cols=107  Identities=9%  Similarity=0.006  Sum_probs=73.0

Q ss_pred             ceeeeeeeee-cCceEEEEEecccccccceeEEEeecCCCceEEEEeEecCCcceeeeccceEEeeCCCCCCCCCCceeE
Q 031993           22 PVTAAKTIYE-DEQGYLIIISLPFADLKRVKVTWWNNLTHGVVKISSLSTACMPYIQRNDRTFKLTDPSPEHCPPGEFIR  100 (149)
Q Consensus        22 PVtaAktIyE-de~gYLi~iSLPfvd~~~vkvswrNt~thGivKI~cvST~~~p~ikRhdRtFkLtdps~ehCPPGeFvr  100 (149)
                      +..-+-.||| ++++|.|.+.||+++.+.+.|+=.    +|.+.|++-....    ....+....     |. .-|.|.|
T Consensus        30 ~~~P~vdI~e~~~~~y~v~adlPGv~kedi~V~v~----~~~LtI~ge~~~~----~~~~~~~~~-----Er-~~g~F~R   95 (142)
T PRK11597         30 QSFPPYNIEKSDDNHYRITLALAGFRQEDLDIQLE----GTRLTVKGTPEQP----EKEVKWLHQ-----GL-VNQPFSL   95 (142)
T ss_pred             CCCCcEEEEEcCCCEEEEEEEeCCCCHHHeEEEEE----CCEEEEEEEEccc----cCCCcEEEE-----EE-eCcEEEE
Confidence            3345789998 688999999999999999999764    7788998864311    111111111     11 3489999


Q ss_pred             EeeCCCCCCCcccceeeecCCCceEEEeeecCc-CCCcceeEEEeecC
Q 031993          101 EIPLPTRIPDDAKLEAYGDETGTGLEIMVPKHR-VGPEEHEVFKFLTS  147 (149)
Q Consensus       101 eipL~trIPedA~leAy~de~g~~LEi~VpK~r-~gpEEhEVrv~lrp  147 (149)
                      .|.||..|=.+   +|-|+.  -||+|-+||.- ....-+-+.|.-||
T Consensus        96 ~f~LP~~vd~~---~A~~~n--GVL~I~lPK~~~~~~~~rkI~I~~~~  138 (142)
T PRK11597         96 SFTLAENMEVS---GATFVN--GLLHIDLIRNEPEAIAPQRIAISERP  138 (142)
T ss_pred             EEECCCCcccC---cCEEcC--CEEEEEEeccCccccCCcEEEECCcc
Confidence            99999988544   466653  37999999963 22233566666665

>PRK10743 heat shock protein IbpA; Provisional

Probab=98.15  E-value=2.6e-05  Score=58.91  Aligned_cols=88  Identities=17%  Similarity=0.127  Sum_probs=64.4

Q ss_pred             eeeee-ecCceEEEEEecccccccceeEEEeecCCCceEEEEeEecCCcceeeeccceEEeeCCCCCCCCCCceeEEeeC
Q 031993           26 AKTIY-EDEQGYLIIISLPFADLKRVKVTWWNNLTHGVVKISSLSTACMPYIQRNDRTFKLTDPSPEHCPPGEFIREIPL  104 (149)
Q Consensus        26 AktIy-Ede~gYLi~iSLPfvd~~~vkvswrNt~thGivKI~cvST~~~p~ikRhdRtFkLtdps~ehCPPGeFvreipL  104 (149)
                      +-.|+ |++++|.|.+.||.++.+.++|+-.    +|.+.|++-.....     .+..|...     -..-|.|.|.|.|
T Consensus        36 ~~di~ee~~~~~~v~aelPGv~kedi~V~v~----~~~LtI~ge~~~~~-----~~~~~~~~-----Er~~g~F~R~~~L  101 (137)
T PRK10743         36 PYNVELVDENHYRIAIAVAGFAESELEITAQ----DNLLVVKGAHADEQ-----KERTYLYQ-----GIAERNFERKFQL  101 (137)
T ss_pred             cEEEEEcCCCEEEEEEECCCCCHHHeEEEEE----CCEEEEEEEECccc-----cCCcEEEE-----EEECCEEEEEEEC
Confidence            47999 5999999999999999999999886    57899998643211     11112211     1245899999999


Q ss_pred             CCCCCCcccceeeecCCCceEEEeeecC
Q 031993          105 PTRIPDDAKLEAYGDETGTGLEIMVPKH  132 (149)
Q Consensus       105 ~trIPedA~leAy~de~g~~LEi~VpK~  132 (149)
                      |..+=.|   +|=|+.  -||+|-+||.
T Consensus       102 P~~Vd~~---~A~~~d--GVL~I~lPK~  124 (137)
T PRK10743        102 AENIHVR---GANLVN--GLLYIDLERV  124 (137)
T ss_pred             CCCcccC---cCEEeC--CEEEEEEeCC
Confidence            9988665   244432  3799999996

>cd06470 ACD_IbpA-B_like Alpha-crystallin domain (ACD) found in Escherichia coli inclusion body-associated proteins IbpA and IbpB, and similar proteins

Probab=98.13  E-value=4.4e-05  Score=52.56  Aligned_cols=88  Identities=14%  Similarity=0.129  Sum_probs=63.1

Q ss_pred             eeeeeec-CceEEEEEecccccccceeEEEeecCCCceEEEEeEecCCcceeeeccceEEeeCCCCCCCCCCceeEEeeC
Q 031993           26 AKTIYED-EQGYLIIISLPFADLKRVKVTWWNNLTHGVVKISSLSTACMPYIQRNDRTFKLTDPSPEHCPPGEFIREIPL  104 (149)
Q Consensus        26 AktIyEd-e~gYLi~iSLPfvd~~~vkvswrNt~thGivKI~cvST~~~p~ikRhdRtFkLtdps~ehCPPGeFvreipL  104 (149)
                      +-.|+|+ +++|.+.+.||+++.+.++|+..+    +.+.|++-.....+    .++.|...     ...-|.|.|.|.|
T Consensus         2 ~~di~e~~~~~~~v~~~lPG~~kedi~v~~~~----~~L~I~g~~~~~~~----~~~~~~~~-----e~~~g~f~R~~~L   68 (90)
T cd06470           2 PYNIEKTGENNYRITLAVAGFSEDDLEIEVEN----NQLTVTGKKADEEN----EEREYLHR-----GIAKRAFERSFNL   68 (90)
T ss_pred             CeeeEEcCCCeEEEEEECCCCCHHHeEEEEEC----CEEEEEEEEccccc----CCCcEEEE-----EEeceEEEEEEEC
Confidence            3579996 599999999999999999999874    68999987655543    23333322     1345899999999


Q ss_pred             CCCCCCcccceeeecCCCceEEEeeec
Q 031993          105 PTRIPDDAKLEAYGDETGTGLEIMVPK  131 (149)
Q Consensus       105 ~trIPedA~leAy~de~g~~LEi~VpK  131 (149)
                      |..+-.+   +|=|+.  -+|.|-+|+
T Consensus        69 P~~vd~~---~A~~~~--GvL~I~l~~   90 (90)
T cd06470          69 ADHVKVK---GAELEN--GLLTIDLER   90 (90)
T ss_pred             CCCceEC---eeEEeC--CEEEEEEEC
Confidence            9876432   565543  358887764

IbpA and IbpB are 16 kDa small heat shock proteins (sHsps). sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. IbpA and IbpB are produced during high-level production of various heterologous proteins, specifically human prorenin, renin and bovine insulin-like growth factor 2 (bIGF-2), and are strongly associated with inclusion bodies containing these heterologous proteins. IbpA and IbpB work as an integrated system to stabilize thermally aggregated proteins in a disaggregation competent state. The chaperone activity of IbpB is also significantly elevated as the temperature increases from normal to heat shock. The high temperature results in the disassociation of 2-3-MDa IbpB oligomers into smaller approximately 6

>COG0071 IbpA Molecular chaperone (small heat shock protein) [Posttranslational modification, protein turnover, chaperones]

Probab=98.03  E-value=5.2e-05  Score=56.07  Aligned_cols=92  Identities=24%  Similarity=0.297  Sum_probs=70.1

Q ss_pred             eeeeeeeecCceEEEEEecccccccceeEEEeecCCCceEEEEeEecC----CcceeeeccceEEeeCCCCCCCCCCcee
Q 031993           24 TAAKTIYEDEQGYLIIISLPFADLKRVKVTWWNNLTHGVVKISSLSTA----CMPYIQRNDRTFKLTDPSPEHCPPGEFI   99 (149)
Q Consensus        24 taAktIyEde~gYLi~iSLPfvd~~~vkvswrNt~thGivKI~cvST~----~~p~ikRhdRtFkLtdps~ehCPPGeFv   99 (149)
                      +=+-+|||+++.|.|.+.||++|.+.++|+..+    +.+.|++-...    ....+.+..|.            -|+|.
T Consensus        40 ~P~vdi~e~~~~~~I~~elPG~~kedI~I~~~~----~~l~I~g~~~~~~~~~~~~~~~~e~~------------~~~f~  103 (146)
T COG0071          40 TPPVDIEETDDEYRITAELPGVDKEDIEITVEG----NTLTIRGEREEEEEEEEEGYLRRERA------------YGEFE  103 (146)
T ss_pred             CCcEEEEEcCCEEEEEEEcCCCChHHeEEEEEC----CEEEEEEEecccccccCCceEEEEEE------------eeeEE
Confidence            446799999999999999999999999998874    44777776543    12222233332            38999


Q ss_pred             EEeeCCCCCCCcccceeeecCCCceEEEeeecCcC
Q 031993          100 REIPLPTRIPDDAKLEAYGDETGTGLEIMVPKHRV  134 (149)
Q Consensus       100 reipL~trIPedA~leAy~de~g~~LEi~VpK~r~  134 (149)
                      |.|+||..+=++ ++.|=|..  -+|.|-+||.-.
T Consensus       104 r~~~Lp~~v~~~-~~~A~~~n--GvL~I~lpk~~~  135 (146)
T COG0071         104 RTFRLPEKVDPE-VIKAKYKN--GLLTVTLPKAEP  135 (146)
T ss_pred             EEEECccccccc-ceeeEeeC--cEEEEEEecccc
Confidence            999999999877 67887753  479999999743

>cd06476 ACD_HspB2_like Alpha crystallin domain (ACD) found in mammalian small heat shock protein (sHsp) HspB2/heat shock 27kDa protein 2 and similar proteins

Probab=97.93  E-value=0.00011  Score=51.06  Aligned_cols=80  Identities=18%  Similarity=0.281  Sum_probs=61.1

Q ss_pred             ecCceEEEEEecccccccceeEEEeecCCCceEEEEeEecCCcceeeeccceEEeeCCCCCCCCCCceeEEeeCCCCCCC
Q 031993           31 EDEQGYLIIISLPFADLKRVKVTWWNNLTHGVVKISSLSTACMPYIQRNDRTFKLTDPSPEHCPPGEFIREIPLPTRIPD  110 (149)
Q Consensus        31 Ede~gYLi~iSLPfvd~~~vkvswrNt~thGivKI~cvST~~~p~ikRhdRtFkLtdps~ehCPPGeFvreipL~trIPe  110 (149)
                      .|++.|.|.+-||.++.+.++|+=.    +|.+.|++-....   -.++++.            -+||.|.|.||..+-.
T Consensus         4 ~~~d~y~v~~dlpG~~~edi~V~v~----~~~L~I~g~~~~~---~~~~~~~------------~~eF~R~~~LP~~vd~   64 (83)
T cd06476           4 SEDDKYQVFLDVCHFTPDEITVRTV----DNLLEVSARHPQR---MDRHGFV------------SREFTRTYILPMDVDP   64 (83)
T ss_pred             ccCCeEEEEEEcCCCCHHHeEEEEE----CCEEEEEEEEcce---ecCCCEE------------EEEEEEEEECCCCCCh
Confidence            5789999999999999999999766    6789999864321   1122222            2469999999988754


Q ss_pred             cccceeeecCCCceEEEeeec
Q 031993          111 DAKLEAYGDETGTGLEIMVPK  131 (149)
Q Consensus       111 dA~leAy~de~g~~LEi~VpK  131 (149)
                       .+++|-|...|- |.|-+||
T Consensus        65 -~~v~A~~~~dGv-L~I~~Pr   83 (83)
T cd06476          65 -LLVRASLSHDGI-LCIQAPR   83 (83)
T ss_pred             -hhEEEEecCCCE-EEEEecC
Confidence             468999977775 9999997

sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. HspB2 is preferentially and constitutively expressed in skeletal muscle and heart. HspB2 shows homooligomeric activity and forms aggregates in muscle cytosol. Although its expression is not induced by heat shock, it redistributes to the insoluble fraction in response to heat shock. In the mouse heart, HspB2 plays a role in maintaining energetic balance, by protecting cardiac energetics during ischemia/reperfusion, and allowing for increased work during acute inotropic challenge. hHspB2 [previously also known as myotonic dystrophy protein kinase (DMPK) binding protein (MKBP)] is selectively up-regulated in skeletal muscles from myotonic dystrophy patients.

>cd06479 ACD_HspB7_like Alpha crystallin domain (ACD) found in mammalian small heat shock protein (sHsp) HspB7, also known as cardiovascular small heat shock protein (cvHsp), and similar proteins

Probab=97.73  E-value=0.0002  Score=49.94  Aligned_cols=80  Identities=18%  Similarity=0.206  Sum_probs=61.6

Q ss_pred             eeeecCceEEEEEecccccccceeEEEeecCCCceEEEEeEecCCcceeeeccceEEeeCCCCCCCCCCceeEEeeCCCC
Q 031993           28 TIYEDEQGYLIIISLPFADLKRVKVTWWNNLTHGVVKISSLSTACMPYIQRNDRTFKLTDPSPEHCPPGEFIREIPLPTR  107 (149)
Q Consensus        28 tIyEde~gYLi~iSLPfvd~~~vkvswrNt~thGivKI~cvST~~~p~ikRhdRtFkLtdps~ehCPPGeFvreipL~tr  107 (149)
                      .|+|+++.|.+.+-||.++.+.++|+=.    .|.+.|++---.       -++.           .-|+|.|.|+||..
T Consensus         2 ~v~e~~~~~~v~~dlpG~~pedi~V~v~----~~~L~I~ger~~-------~~~~-----------~~g~F~R~~~LP~~   59 (81)
T cd06479           2 NVKTLGDTYQFAVDVSDFSPEDIIVTTS----NNQIEVHAEKLA-------SDGT-----------VMNTFTHKCQLPED   59 (81)
T ss_pred             CccCcCCeEEEEEECCCCCHHHeEEEEE----CCEEEEEEEEec-------cCCC-----------EEEEEEEEEECCCC
Confidence            4899999999999999999999999655    578999874211       0110           36899999999999


Q ss_pred             CCCcccceeeecCCCceEEEeeec
Q 031993          108 IPDDAKLEAYGDETGTGLEIMVPK  131 (149)
Q Consensus       108 IPedA~leAy~de~g~~LEi~VpK  131 (149)
                      |-.+ +++|-|.+.|- |+|-+++
T Consensus        60 vd~e-~v~A~l~~~Gv-L~I~~~~   81 (81)
T cd06479          60 VDPT-SVSSSLGEDGT-LTIKARR   81 (81)
T ss_pred             cCHH-HeEEEecCCCE-EEEEecC
Confidence            8654 58888766675 8887653

sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. HspB7 is a 25-kDa protein, preferentially expressed in heart and skeletal muscle. It binds the cytoskeleton protein alpha-filamin (also known as actin-binding protein 280). The expression of HspB7 is increased during rat muscle aging. Its expression is also modulated in obesity implicating this protein in this and related metabolic disorders. As the human gene encoding HspB7 is mapped to chromosome 1p36.23-p34.3 it is a positional candidate for several dystrophies and myopathies.

>cd06482 ACD_HspB10 Alpha crystallin domain (ACD) found in mammalian small heat shock protein (sHsp) HspB10, also known as sperm outer dense fiber protein (ODFP), and similar proteins

Probab=97.44  E-value=0.00083  Score=47.64  Aligned_cols=82  Identities=16%  Similarity=0.107  Sum_probs=60.4

Q ss_pred             ecCceEEEEEecccccccceeEEEeecCCCceEEEEeEecCCcceeeeccceEEeeCCCCCCCCCCceeEEeeCCCCCCC
Q 031993           31 EDEQGYLIIISLPFADLKRVKVTWWNNLTHGVVKISSLSTACMPYIQRNDRTFKLTDPSPEHCPPGEFIREIPLPTRIPD  110 (149)
Q Consensus        31 Ede~gYLi~iSLPfvd~~~vkvswrNt~thGivKI~cvST~~~p~ikRhdRtFkLtdps~ehCPPGeFvreipL~trIPe  110 (149)
                      -|++.|.|.+-||.++.+.++|+..    +|.+.|++-......   ..++        .|. ..|+|.|.|.||..|=.
T Consensus         5 ~~~~~~~v~adlPG~~kedI~V~v~----~~~L~I~ger~~~~e---~~~~--------~er-~~g~F~R~f~LP~~Vd~   68 (87)
T cd06482           5 CDSSNVLASVDVCGFEPDQVKVKVK----DGKVQVSAERENRYD---CLGS--------KKY-SYMNICKEFSLPPGVDE   68 (87)
T ss_pred             ccCCEEEEEEECCCCCHHHeEEEEE----CCEEEEEEEEecccc---cCCc--------cEE-EEEEEEEEEECCCCcCh
Confidence            3788999999999999999999887    688999987543221   0111        122 67999999999998855


Q ss_pred             cccceeeecCCCceEEEeee
Q 031993          111 DAKLEAYGDETGTGLEIMVP  130 (149)
Q Consensus       111 dA~leAy~de~g~~LEi~Vp  130 (149)
                      | +++|=|..-| +|+|=-|
T Consensus        69 d-~i~A~~~~~~-~l~i~~~   86 (87)
T cd06482          69 K-DVTYSYGLGS-VVKIETP   86 (87)
T ss_pred             H-HcEEEEcCCC-EEEEeeC
Confidence            4 5777776544 5887544

sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Human (h) HspB10 occurs exclusively in the axoneme of sperm cells and may have a cytoskeletal role.

>cd06477 ACD_HspB3_Like Alpha crystallin domain (ACD) found in mammalian HspB3, also known as heat-shock protein 27-like protein (HSPL27, 17-kDa) and similar proteins

Probab=97.40  E-value=0.0023  Score=44.95  Aligned_cols=79  Identities=18%  Similarity=0.257  Sum_probs=58.2

Q ss_pred             ecCceEEEEEecccccccceeEEEeecCCCceEEEEeEecCCcceeeeccceEEeeCCCCCCCCCCceeEEeeCCCCCCC
Q 031993           31 EDEQGYLIIISLPFADLKRVKVTWWNNLTHGVVKISSLSTACMPYIQRNDRTFKLTDPSPEHCPPGEFIREIPLPTRIPD  110 (149)
Q Consensus        31 Ede~gYLi~iSLPfvd~~~vkvswrNt~thGivKI~cvST~~~p~ikRhdRtFkLtdps~ehCPPGeFvreipL~trIPe  110 (149)
                      |++++|.|.+-||.++.+.++|+-.    +|.+.|++-.....     .++.|.          -+.|.|.|+||..+-.
T Consensus         4 e~~~~~~v~~dlpG~~~edI~V~v~----~~~L~I~ge~~~~~-----~~~~~~----------~r~F~R~~~LP~~Vd~   64 (83)
T cd06477           4 EGKPMFQILLDVVQFRPEDIIIQVF----EGWLLIKGQHGVRM-----DEHGFI----------SRSFTRQYQLPDGVEH   64 (83)
T ss_pred             cCCceEEEEEEcCCCCHHHeEEEEE----CCEEEEEEEEcccc-----CCCCEE----------EEEEEEEEECCCCcch
Confidence            7899999999999999999999655    78999999754422     222231          1289999999988865


Q ss_pred             cccceeeecCCCceEEEeee
Q 031993          111 DAKLEAYGDETGTGLEIMVP  130 (149)
Q Consensus       111 dA~leAy~de~g~~LEi~Vp  130 (149)
                      + +++|=|.+.| +|+|-.|
T Consensus        65 ~-~v~A~~~~dG-vL~I~~~   82 (83)
T cd06477          65 K-DLSAMLCHDG-ILVVETK   82 (83)
T ss_pred             h-eEEEEEcCCC-EEEEEec
Confidence            4 5777654555 4888654

sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. HspB3 is expressed in adult skeletal muscle, smooth muscle, and heart, and in several other fetal tissues. In muscle cells HspB3 forms an oligomeric 150 kDa complex with myotonic dystrophy protein kinase-binding protein (MKBP/ HspB2), this complex may comprise one of two independent muscle-cell specific chaperone systems. The expression of HspB3 is induced during muscle differentiation controlled by the myogenic factor MyoD. HspB3 may also interact with Hsp22 (HspB8).

>cd06481 ACD_HspB9_like Alpha crystallin domain (ACD) found in mammalian small heat shock protein (sHsp) HspB9 and similar proteins

Probab=97.21  E-value=0.0039  Score=43.37  Aligned_cols=83  Identities=16%  Similarity=0.234  Sum_probs=60.0

Q ss_pred             ecCceEEEEEecccccccceeEEEeecCCCceEEEEeEecCCcceeeeccceEEeeCCCCCCCCCCceeEEeeCCCCCCC
Q 031993           31 EDEQGYLIIISLPFADLKRVKVTWWNNLTHGVVKISSLSTACMPYIQRNDRTFKLTDPSPEHCPPGEFIREIPLPTRIPD  110 (149)
Q Consensus        31 Ede~gYLi~iSLPfvd~~~vkvswrNt~thGivKI~cvST~~~p~ikRhdRtFkLtdps~ehCPPGeFvreipL~trIPe  110 (149)
                      +-+++|.|.+-||.++.+.++|+=.    ++.+.|++.......   -.++.|.        +--|+|.|.|.||..|=.
T Consensus         4 ~~~d~~~v~~dlpG~~~edI~V~v~----~~~L~I~g~~~~~~~---~~~~~~~--------~~~~~F~R~~~LP~~Vd~   68 (87)
T cd06481           4 DGKEGFSLKLDVRGFSPEDLSVRVD----GRKLVVTGKREKKNE---DEKGSFS--------YEYQEFVREAQLPEHVDP   68 (87)
T ss_pred             CccceEEEEEECCCCChHHeEEEEE----CCEEEEEEEEeeecc---cCCCcEE--------EEeeEEEEEEECCCCcCh
Confidence            3568999999999999999999765    678999987543211   0111221        114899999999988743


Q ss_pred             cccceeeecCCCceEEEeee
Q 031993          111 DAKLEAYGDETGTGLEIMVP  130 (149)
Q Consensus       111 dA~leAy~de~g~~LEi~Vp  130 (149)
                       ..+.|.|.+.|- |.|-+|
T Consensus        69 -~~i~A~~~~dGv-L~I~~P   86 (87)
T cd06481          69 -EAVTCSLSPSGH-LHIRAP   86 (87)
T ss_pred             -HHeEEEeCCCce-EEEEcC
Confidence             458899977775 888887

sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Human (h) HspB9 is expressed exclusively in the normal testis and in various tumor samples and is a cancer/testis antigen. hHspB9 interacts with TCTEL1 (T-complex testis expressed protein -1), a subunit of dynein. hHspB9 and TCTEL1 are co-expressed in similar cells within the testis and in tumor cells. Included in this group is Xenopus Hsp30, a developmentally-regulated heat-inducible molecular chaperone.

>cd06469 p23_DYX1C1_like p23_like domain found in proteins similar to dyslexia susceptibility 1 (DYX1) candidate 1 (C1) protein, DYX1C1

Probab=96.48  E-value=0.045  Score=35.34  Aligned_cols=69  Identities=17%  Similarity=0.166  Sum_probs=50.7

Q ss_pred             eecCceEEEEEecccccccceeEEEeecCCCceEEEEeEecCCcceeeeccceEEeeCCCCCCCCCCceeEEeeCCCCCC
Q 031993           30 YEDEQGYLIIISLPFADLKRVKVTWWNNLTHGVVKISSLSTACMPYIQRNDRTFKLTDPSPEHCPPGEFIREIPLPTRIP  109 (149)
Q Consensus        30 yEde~gYLi~iSLPfvd~~~vkvswrNt~thGivKI~cvST~~~p~ikRhdRtFkLtdps~ehCPPGeFvreipL~trIP  109 (149)
                      |++++-+.|.|-||.+....++|+-.+    ..++|++                            ..|.+++.|+..|-
T Consensus         2 ~Qt~~~v~i~i~~p~v~~~~v~v~~~~----~~l~i~~----------------------------~~~~~~~~l~~~I~   49 (78)
T cd06469           2 SQTDEDVKISVPLKGVKTSKVDIFCSD----LYLKVNF----------------------------PPYLFELDLAAPID   49 (78)
T ss_pred             cccCCEEEEEEEeCCCccccceEEEec----CEEEEcC----------------------------CCEEEEEeCccccc
Confidence            678889999999999988888876643    4566655                            14899999999983


Q ss_pred             CcccceeeecCCCceEEEeeecCc
Q 031993          110 DDAKLEAYGDETGTGLEIMVPKHR  133 (149)
Q Consensus       110 edA~leAy~de~g~~LEi~VpK~r  133 (149)
                      .| +..+-++.  ..|+|.++|..
T Consensus        50 ~e-~~~~~~~~--~~l~i~L~K~~   70 (78)
T cd06469          50 DE-KSSAKIGN--GVLVFTLVKKE   70 (78)
T ss_pred             cc-ccEEEEeC--CEEEEEEEeCC
Confidence            33 34444543  36999999964

The human gene encoding this protein is a positional candidate gene for developmental dyslexia (DD), it is located on 15q21.3 by the DYX1 DD susceptibility locus (15q15-21). Independent association studies have reported conflicting results. However, association of short-term memory, which plays a role in DD, with a variant within the DYX1C1 gene has been reported. Most proteins belonging to this group contain a C-terminal tetratricopeptide repeat (TPR) protein binding region.

>KOG0710 consensus Molecular chaperone (small heat-shock protein Hsp26/Hsp42) [Posttranslational modification, protein turnover, chaperones]

Probab=95.94  E-value=0.027  Score=44.48  Aligned_cols=102  Identities=22%  Similarity=0.249  Sum_probs=74.8

Q ss_pred             ccceeeeeeeeecCceEEEEEecccccccceeEEEeecCCCceEEEEeEecCCcce------eeeccceEEeeCCCCCCC
Q 031993           20 YGPVTAAKTIYEDEQGYLIIISLPFADLKRVKVTWWNNLTHGVVKISSLSTACMPY------IQRNDRTFKLTDPSPEHC   93 (149)
Q Consensus        20 ~GPVtaAktIyEde~gYLi~iSLPfvd~~~vkvswrNt~thGivKI~cvST~~~p~------ikRhdRtFkLtdps~ehC   93 (149)
                      ..+.-++..|+|-++.|-+.+.||.+..+.+||.-.+.-   ++.|++-......=      .++-.|..          
T Consensus        80 ~~~~~~~~~v~e~~~~~~~~~~~Pgl~ke~iKv~~~~~~---~l~isGe~~~e~e~~~~~~~~~~~E~~~----------  146 (196)
T KOG0710|consen   80 KSEARVPWDVKESPDAHEFKVDLPGLKKEDIKVEVEDEK---VLTISGERKKEEEESGSGKKWKRVERKL----------  146 (196)
T ss_pred             cccccCCcccccCCCceEEEeeCCCCCchhceEEeccCc---EEEEecccccccccccCCccceeehhcc----------
Confidence            344455666899999999999999999999999876443   78888776554431      22223322          


Q ss_pred             CCCceeEEeeCCCCCCCcccceeeecCCCceEEEeeecCcCCCcce
Q 031993           94 PPGEFIREIPLPTRIPDDAKLEAYGDETGTGLEIMVPKHRVGPEEH  139 (149)
Q Consensus        94 PPGeFvreipL~trIPedA~leAy~de~g~~LEi~VpK~r~gpEEh  139 (149)
                        |.|.|.+.||.-+ +..+++|.|.. | ||-|.|||.-.-.++-
T Consensus       147 --g~F~r~~~lPenv-~~d~ikA~~~n-G-VL~VvvpK~~~~~~~~  187 (196)
T KOG0710|consen  147 --GKFKRRFELPENV-DVDEIKAEMEN-G-VLTVVVPKLEPLLKKP  187 (196)
T ss_pred             --cceEeeecCCccc-cHHHHHHHhhC-C-eEEEEEecccccccCC
Confidence              3999999999998 77888888854 4 5999999986543333

>cd06463 p23_like Proteins containing this p23_like domain include p23 and its Saccharomyces cerevisiae (Sc) homolog Sba1

Probab=95.93  E-value=0.13  Score=32.06  Aligned_cols=75  Identities=21%  Similarity=0.154  Sum_probs=53.6

Q ss_pred             eecCceEEEEEecccccccceeEEEeecCCCceEEEEeEecCCcceeeeccceEEeeCCCCCCCCCCceeEEeeCCCCCC
Q 031993           30 YEDEQGYLIIISLPFADLKRVKVTWWNNLTHGVVKISSLSTACMPYIQRNDRTFKLTDPSPEHCPPGEFIREIPLPTRIP  109 (149)
Q Consensus        30 yEde~gYLi~iSLPfvd~~~vkvswrNt~thGivKI~cvST~~~p~ikRhdRtFkLtdps~ehCPPGeFvreipL~trIP  109 (149)
                      +++++...|.|-+|.+..+.+.|+..+    ..+.|+....                       +.+.|.+++.|+..|-
T Consensus         2 ~Q~~~~v~i~v~~~~~~~~~~~v~~~~----~~l~i~~~~~-----------------------~~~~~~~~~~L~~~I~   54 (84)
T cd06463           2 YQTLDEVTITIPLKDVTKKDVKVEFTP----KSLTVSVKGG-----------------------GGKEYLLEGELFGPID   54 (84)
T ss_pred             cccccEEEEEEEcCCCCccceEEEEec----CEEEEEeeCC-----------------------CCCceEEeeEccCccc
Confidence            567788899999999988888887764    3355554321                       3477899999999997


Q ss_pred             CcccceeeecCCCceEEEeeecCcC
Q 031993          110 DDAKLEAYGDETGTGLEIMVPKHRV  134 (149)
Q Consensus       110 edA~leAy~de~g~~LEi~VpK~r~  134 (149)
                      .|+- .+-+  ....|+|.++|...
T Consensus        55 ~~~s-~~~~--~~~~l~i~L~K~~~   76 (84)
T cd06463          55 PEES-KWTV--EDRKIEITLKKKEP   76 (84)
T ss_pred             hhhc-EEEE--eCCEEEEEEEECCC
Confidence            7632 2222  23679999999754

Both are co-chaperones for the heat shock protein (Hsp) 90. p23 binds Hsp90 and participates in the folding of a number of Hsp90 clients, including the progesterone receptor. p23 also has a passive chaperoning activity and in addition may participate in prostaglandin synthesis. Both p23 and Sba1p can regulate telomerase activity. This group includes domains similar to the C-terminal CHORD-SGT1 (CS) domain of suppressor of G2 allele of Skp1 (Sgt1). Sgt1 interacts with multiple protein complexes and has the features of a co-chaperone. Human (h) Sgt1 interacts with both Hsp70 and Hsp90, and has been shown to bind Hsp90 through its CS domain. Saccharomyces cerevisiae (Sc) Sgt1 is a subunit of both core kinetochore and SCF (Skp1-Cul1-F-box) ubiquitin ligase complexes. Sgt1 is required for pathogen resistance in plants. This group also includes the p23_like domains of

>cd06480 ACD_HspB8_like Alpha-crystallin domain (ACD) found in mammalian 21

Probab=94.79  E-value=0.2  Score=36.01  Aligned_cols=89  Identities=17%  Similarity=0.227  Sum_probs=64.7

Q ss_pred             cceeeeeeeeecCceEEEEEecccccccceeEEEeecCCCceEEEEeEecCCcceeeeccceEEeeCCCCCCCCCCceeE
Q 031993           21 GPVTAAKTIYEDEQGYLIIISLPFADLKRVKVTWWNNLTHGVVKISSLSTACMPYIQRNDRTFKLTDPSPEHCPPGEFIR  100 (149)
Q Consensus        21 GPVtaAktIyEde~gYLi~iSLPfvd~~~vkvswrNt~thGivKI~cvST~~~p~ikRhdRtFkLtdps~ehCPPGeFvr  100 (149)
                      ||--..-++-.+++.|-|.+-+-.++.+-++|+=.    ++.|.|++--...+-   -++  |-        +  ++|.|
T Consensus         2 ~~~~~~~~~~~~~~~f~v~ldv~gF~pEDL~Vkv~----~~~L~V~Gkh~~~~~---e~g--~~--------~--r~F~R   62 (91)
T cd06480           2 GPPEPRNPPPNSSEPWKVCVNVHSFKPEELTVKTK----DGFVEVSGKHEEQQK---EGG--IV--------S--KNFTK   62 (91)
T ss_pred             CCCcccCCCCCCCCcEEEEEEeCCCCHHHcEEEEE----CCEEEEEEEECcccC---CCC--EE--------E--EEEEE
Confidence            33334445567889999999999999999999754    678999987554321   111  11        1  89999


Q ss_pred             EeeCCCCCCCcccceeeecCCCceEEEeee
Q 031993          101 EIPLPTRIPDDAKLEAYGDETGTGLEIMVP  130 (149)
Q Consensus       101 eipL~trIPedA~leAy~de~g~~LEi~Vp  130 (149)
                      .+.||-.+-. ..+.|-+.+.|- |.|..|
T Consensus        63 ~~~LP~~Vd~-~~v~s~l~~dGv-L~IeaP   90 (91)
T cd06480          63 KIQLPPEVDP-VTVFASLSPEGL-LIIEAP   90 (91)
T ss_pred             EEECCCCCCc-hhEEEEeCCCCe-EEEEcC
Confidence            9999877744 467888888886 888877

6 KDa small heat shock protein (sHsp) HspB8, also denoted as Hsp22 in humans, and similar proteins. sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. A chaperone complex formed of HspB8 and Bag3 stimulates degradation of protein complexes by macroautophagy. HspB8 also forms complexes with Hsp27 (HspB1), MKBP (HspB2), HspB3, alphaB-crystallin (HspB5), Hsp20 (HspB6), and cvHsp (HspB7). These latter interactions may depend on phosphorylation of the respective partner sHsp. HspB8 may participate in the regulation of cell proliferation, cardiac hypertrophy, apoptosis, and carcinogenesis. Point mutations in HspB8 have been correlated with the development of several congenital neurological diseases, including Charcot Marie tooth disease and distal motor neuropathy type II.

>cd06466 p23_CS_SGT1_like p23_like domain similar to the C-terminal CHORD-SGT1 (CS) domain of Sgt1 (suppressor of G2 allele of Skp1)

Probab=88.10  E-value=4.4  Score=26.13  Aligned_cols=74  Identities=20%  Similarity=0.220  Sum_probs=49.2

Q ss_pred             eecCceEEEEEecccccccceeEEEeecCCCceEEEEeEecCCcceeeeccceEEeeCCCCCCCCCCceeEEeeCCCCCC
Q 031993           30 YEDEQGYLIIISLPFADLKRVKVTWWNNLTHGVVKISSLSTACMPYIQRNDRTFKLTDPSPEHCPPGEFIREIPLPTRIP  109 (149)
Q Consensus        30 yEde~gYLi~iSLPfvd~~~vkvswrNt~thGivKI~cvST~~~p~ikRhdRtFkLtdps~ehCPPGeFvreipL~trIP  109 (149)
                      |++++-..|.|-+|.+..+.++|+-.++    .+.|++...                       ..++|..++.|...|-
T Consensus         3 ~Qt~~~v~i~v~~~~~~~~~v~v~~~~~----~l~i~~~~~-----------------------~~~~~~~~~~L~~~I~   55 (84)
T cd06466           3 YQTDTSVTVTIYAKNVDKEDVKVEFNEQ----SLSVSIILP-----------------------GGSEYQLELDLFGPID   55 (84)
T ss_pred             cccCCEEEEEEEECCCCHHHCEEEEecC----EEEEEEECC-----------------------CCCeEEEecccccccC
Confidence            5666667778888988888888877642    255544321                       3457888999999985


Q ss_pred             CcccceeeecCCCceEEEeeecCc
Q 031993          110 DDAKLEAYGDETGTGLEIMVPKHR  133 (149)
Q Consensus       110 edA~leAy~de~g~~LEi~VpK~r  133 (149)
                      .+   +..|.=....+||.+.|..
T Consensus        56 ~~---~s~~~~~~~~vei~L~K~~   76 (84)
T cd06466          56 PE---QSKVSVLPTKVEITLKKAE   76 (84)
T ss_pred             ch---hcEEEEeCeEEEEEEEcCC
Confidence            44   2223323345999999964

Sgt1 interacts with multiple protein complexes and has the features of a cochaperone. Human (h) Sgt1 interacts with both Hsp70 and Hsp90, and has been shown to bind Hsp90 through its CS domain. Saccharomyces cerevisiae (Sc) Sgt1 is a subunit of both core kinetochore and SCF (Skp1-Cul1-F-box) ubiquitin ligase complexes. Sgt1 is required for pathogen resistance in plants. ScSgt1 is needed for the G1/S and G2/M cell-cycle transitions, and for assembly of the core kinetochore complex (CBF3) via activation of Ctf13, the F-box protein. Binding of Hsp82 (a yeast Hsp90 homologue) to ScSgt1, promotes the binding of Sgt1 to Skp1 and of Skp1 to Ctf13. Some proteins in this group have an SGT1-specific (SGS) domain at the extreme C-terminus. The ScSgt1-SGS domain binds adenylate cyclase. The hSgt1-SGS domain interacts with some S100 family proteins, and studies sug

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	149
4fei_A	102	Heat shock protein-related protein; stress respons	98.98
3gla_A	100	Low molecular weight heat shock protein; HSPA, SHP	98.94
4eld_A	161	MJ16.5-P1, small heat shock protein HSP16.5; chape	98.91
2wj5_A	101	Heat shock protein beta-6; chaperone, disulfide bo	98.88
3l1e_A	106	Alpha-crystallin A chain; lens transparency, polyd	98.82
1gme_A	151	Heat shock protein 16.9B; small heat shock protein	98.75
2y1y_A	90	Alpha-crystallin B chain,; small heat shock protei	98.62
2klr_A	175	Alpha-crystallin B chain; protein, dimer, oligomer	98.6
3q9p_A	85	Heat shock protein beta-1; alpha-crystallin domain	98.6
3aab_A	123	Putative uncharacterized protein ST1653; alpha-cry	98.6
2bol_A	314	TSP36, small heat shock protein; A-crystallin, mol	98.15
2bol_A	314	TSP36, small heat shock protein; A-crystallin, mol	97.13
2k8q_A	134	Protein SHQ1; beta-sandwich, CS domain, nucleus, s	89.59
2xcm_C	92	SGT1-like protein, cytosolic heat shock protein 90	88.12
1rl1_A	114	Suppressor of G2 allele of SKP1 homolog; beta sand	87.37
3eud_A	115	Protein SHQ1; CS domain HSP20-like domain SHQ1 H/A	83.04

>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}

Probab=98.98  E-value=8.6e-09  Score=70.74  Aligned_cols=93  Identities=23%  Similarity=0.307  Sum_probs=72.6

Q ss_pred             cceeeeeeeeecCceEEEEEecccccccceeEEEeecCCCceEEEEeEecCCcceeeeccceEEeeCCCCCCCCCCceeE
Q 031993           21 GPVTAAKTIYEDEQGYLIIISLPFADLKRVKVTWWNNLTHGVVKISSLSTACMPYIQRNDRTFKLTDPSPEHCPPGEFIR  100 (149)
Q Consensus        21 GPVtaAktIyEde~gYLi~iSLPfvd~~~vkvswrNt~thGivKI~cvST~~~p~ikRhdRtFkLtdps~ehCPPGeFvr  100 (149)
                      |...-+-.|+|+++.|.+.+.||+++.+.++|+-.    .+.+.|++-......+. +..            ..-|.|.|
T Consensus         3 g~~~P~~di~e~~~~~~v~~~lPG~~~edi~v~~~----~~~L~I~g~~~~~~~~~-~~e------------r~~g~f~R   65 (102)
T 4fei_A            3 GPWTPAADWRDAGTHLDLLLDVPGVDAGTLALAED----GGQLTVSGERPGTEHLL-RSE------------RPSGRFVR   65 (102)
T ss_dssp             EECCCCEEEEEETTEEEEEEECTTCCGGGCEEEEE----TTEEEEEEEECCCSSCS-SCC------------SEEEEEEE
T ss_pred             CcccCcEEEEEcCCEEEEEEECCCCchHhEEEEEE----CCEEEEEEEEecCCCEE-EEE------------EeccEEEE
Confidence            55666789999999999999999999999999976    57899998764321111 111            13489999


Q ss_pred             EeeCCCCCCCcccceeeecCCCceEEEeeecCc
Q 031993          101 EIPLPTRIPDDAKLEAYGDETGTGLEIMVPKHR  133 (149)
Q Consensus       101 eipL~trIPedA~leAy~de~g~~LEi~VpK~r  133 (149)
                      .|+||..+ +-.+++|-|+ .| +|+|-+||..
T Consensus        66 ~~~LP~~v-d~~~i~A~~~-~G-vL~I~lpK~~   95 (102)
T 4fei_A           66 ELAFPEPV-RPASGVASLA-GG-VLTVRFEKLR   95 (102)
T ss_dssp             EEECSSCB-CTTCCEEEEE-TT-EEEEEEEBSS
T ss_pred             EEECCCCc-chhHcEEEEE-CC-EEEEEEEccC
Confidence            99999998 4457899995 45 7999999974

>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A

Probab=98.94  E-value=2e-08  Score=67.68  Aligned_cols=92  Identities=25%  Similarity=0.373  Sum_probs=70.5

Q ss_pred             eeeeeecCceEEEEEecccccccceeEEEeecCCCceEEEEeEecCCcceeeeccceEEeeCCCCCCCCCCceeEEeeCC
Q 031993           26 AKTIYEDEQGYLIIISLPFADLKRVKVTWWNNLTHGVVKISSLSTACMPYIQRNDRTFKLTDPSPEHCPPGEFIREIPLP  105 (149)
Q Consensus        26 AktIyEde~gYLi~iSLPfvd~~~vkvswrNt~thGivKI~cvST~~~p~ikRhdRtFkLtdps~ehCPPGeFvreipL~  105 (149)
                      +-+|+|++++|.+.+.||+++.+.++|+-.    .+.+.|++-......   ..+..|...     -..-|.|.|.|+||
T Consensus         6 ~~di~e~~~~~~v~~~lPG~~~edi~v~~~----~~~L~I~g~~~~~~~---~~~~~~~~~-----er~~g~f~r~~~LP   73 (100)
T 3gla_A            6 RVDIKEEVNHFVLYADLPGIDPSQIEVQMD----KGILSIRGERKSESS---TETERFSRI-----ERRYGSFHRRFALP   73 (100)
T ss_dssp             CEEEEECSSEEEEEEECTTSCGGGCEEEEE----TTEEEEEEEECCGGG---SSGGGEEEE-----CCCCEEEEEEEECC
T ss_pred             cEEEEECCCEEEEEEECCCCCHHHEEEEEE----CCEEEEEEEEcCcCc---cCCccEEEE-----eecceEEEEEEECC
Confidence            568999999999999999999999999987    478999987654321   112223222     12348999999999


Q ss_pred             CCCCCcccceeeecCCCceEEEeeecC
Q 031993          106 TRIPDDAKLEAYGDETGTGLEIMVPKH  132 (149)
Q Consensus       106 trIPedA~leAy~de~g~~LEi~VpK~  132 (149)
                      ..+ +-.+++|-|.. | +|+|-+||.
T Consensus        74 ~~v-d~~~i~A~~~~-G-vL~I~~pK~   97 (100)
T 3gla_A           74 DSA-DADGITAAGRN-G-VLEIRIPKR   97 (100)
T ss_dssp             TTB-CTTSCEEEEET-T-EEEEEEEBC
T ss_pred             CCc-ChHHeEEEEeC-C-EEEEEEecC
Confidence            998 44578998864 4 699999996

>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A

Probab=98.91  E-value=1.8e-08  Score=73.94  Aligned_cols=91  Identities=21%  Similarity=0.308  Sum_probs=68.4

Q ss_pred             eeeeecCceEEEEEecccccccceeEEEeecCCCceEEEEeEecCCcceeeeccceEEeeCCCCCCC-CCCceeEEeeCC
Q 031993           27 KTIYEDEQGYLIIISLPFADLKRVKVTWWNNLTHGVVKISSLSTACMPYIQRNDRTFKLTDPSPEHC-PPGEFIREIPLP  105 (149)
Q Consensus        27 ktIyEde~gYLi~iSLPfvd~~~vkvswrNt~thGivKI~cvST~~~p~ikRhdRtFkLtdps~ehC-PPGeFvreipL~  105 (149)
                      -+|+|++++|.|.+.||+++.+.++|+..+    +.+.|++-.....  ....+ .|-..     -. .-|.|.|.|.||
T Consensus        59 vdi~e~~~~~~v~~dlPG~~~edi~V~~~~----~~L~I~g~~~~~~--~~~~~-~~~~~-----Er~~~g~f~R~~~LP  126 (161)
T 4eld_A           59 ISIIEGDQHIKVIAWLPGVNKEDIILNAVG----DTLEIRAKRSPLM--ITESE-RIIYS-----EIPEEEEIYRTIKLP  126 (161)
T ss_dssp             EEEEECSSEEEEEEECTTCCGGGEEEEEET----TEEEEEEECCCCC--CCSSC-EEEEE-----CSCCCCEEEEEEECS
T ss_pred             eeEEEeCCEEEEEEECCCCChHhEEEEEEC----CEEEEEEEEcccc--cCCCc-eEEEE-----EeeccccEEEEEECC
Confidence            699999999999999999999999999874    7899988644311  00111 12111     12 458999999999


Q ss_pred             CCCCCcccceeeecCCCceEEEeeecC
Q 031993          106 TRIPDDAKLEAYGDETGTGLEIMVPKH  132 (149)
Q Consensus       106 trIPedA~leAy~de~g~~LEi~VpK~  132 (149)
                      ..+-. .+++|-|+ .| +|+|-+||.
T Consensus       127 ~~vd~-~~i~A~~~-nG-vL~I~lpK~  150 (161)
T 4eld_A          127 ATVKE-ENASAKFE-NG-VLSVILPKA  150 (161)
T ss_dssp             SCBCG-GGCEEEEE-TT-EEEEEEEBC
T ss_pred             CCccc-ccEEEEEE-CC-EEEEEEEcC
Confidence            98844 45999995 45 799999996

>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}

Probab=98.88  E-value=1.7e-08  Score=69.79  Aligned_cols=87  Identities=16%  Similarity=0.192  Sum_probs=67.0

Q ss_pred             eeeeeeecCceEEEEEecccccccceeEEEeecCCCceEEEEeEecCCcceeeeccceEEeeCCCCCCCCCCceeEEeeC
Q 031993           25 AAKTIYEDEQGYLIIISLPFADLKRVKVTWWNNLTHGVVKISSLSTACMPYIQRNDRTFKLTDPSPEHCPPGEFIREIPL  104 (149)
Q Consensus        25 aAktIyEde~gYLi~iSLPfvd~~~vkvswrNt~thGivKI~cvST~~~p~ikRhdRtFkLtdps~ehCPPGeFvreipL  104 (149)
                      ++-+|||++++|.+.+.||.++.+.++|+..    .|.+.|++--....     .+..|-.          .||.|+|+|
T Consensus         2 ~~vdi~e~~~~~~v~~dlPG~~~edI~V~v~----~~~L~I~g~~~~~~-----~~~~~~~----------~eF~R~~~L   62 (101)
T 2wj5_A            2 AMAQVPTDPGYFSVLLDVKHFSPEEISVKVV----GDHVEVHARHEERP-----DEHGFIA----------REFHRRYRL   62 (101)
T ss_dssp             CCCCCCCCSSCEEEEEECTTSCGGGEEEEEE----TTEEEEEEEEEECS-----STTCCEE----------EEEEEEEEC
T ss_pred             CcEEEEEeCCEEEEEEECCCCcHHHeEEEEE----CCEEEEEEEEeccc-----CCCCEEE----------EEEEEEEEC
Confidence            4568999999999999999999999999987    47899998754321     0111111          249999999


Q ss_pred             CCCCCCcccceeeecCCCceEEEeeecC
Q 031993          105 PTRIPDDAKLEAYGDETGTGLEIMVPKH  132 (149)
Q Consensus       105 ~trIPedA~leAy~de~g~~LEi~VpK~  132 (149)
                      |..+- ..++.|.|.+.| +|+|-+||.
T Consensus        63 P~~vd-~~~i~A~~s~nG-vL~I~lPK~   88 (101)
T 2wj5_A           63 PPGVD-PAAVTSALSPEG-VLSIQATPA   88 (101)
T ss_dssp             CTTBC-TTCCEEEECTTS-EEEEEECBC
T ss_pred             CCCcC-hhHCEEEECCCC-EEEEEEECC
Confidence            98873 346899996666 599999997

>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A

Probab=98.82  E-value=7.7e-08  Score=67.11  Aligned_cols=90  Identities=19%  Similarity=0.290  Sum_probs=68.6

Q ss_pred             eeeeeeecCceEEEEEecccccccceeEEEeecCCCceEEEEeEecCCcceeeeccceEEeeCCCCCCCCCCceeEEeeC
Q 031993           25 AAKTIYEDEQGYLIIISLPFADLKRVKVTWWNNLTHGVVKISSLSTACMPYIQRNDRTFKLTDPSPEHCPPGEFIREIPL  104 (149)
Q Consensus        25 aAktIyEde~gYLi~iSLPfvd~~~vkvswrNt~thGivKI~cvST~~~p~ikRhdRtFkLtdps~ehCPPGeFvreipL  104 (149)
                      ++-.|+|++++|.+.+-||.++.+.++|+-.|    |.+.|++-....     ..+..|..          .+|.|.|+|
T Consensus         3 g~~~i~e~~~~~~v~~dlPG~~~edi~V~v~~----~~L~I~g~~~~~-----~~~~~~~~----------~eF~R~~~L   63 (106)
T 3l1e_A            3 GISEVRSDRDKFVIFLDVKHFSPEDLTVKVQE----DFVEIHGKHNER-----QDDHGYIS----------REFHRRYRL   63 (106)
T ss_dssp             CSEEEEECSSEEEEEEECTTSCGGGEEEEEET----TEEEEEEEEEEE-----ETTTEEEE----------EEEEEEEEC
T ss_pred             CceEEEEcCCEEEEEEECCCCChHHEEEEEEC----CEEEEEEEEccc-----cCCCCEEE----------EEEEEEEEC
Confidence            45689999999999999999999999999874    789999853211     11122221          259999999


Q ss_pred             CCCCCCcccceeeecCCCceEEEeeecCcCC
Q 031993          105 PTRIPDDAKLEAYGDETGTGLEIMVPKHRVG  135 (149)
Q Consensus       105 ~trIPedA~leAy~de~g~~LEi~VpK~r~g  135 (149)
                      |..+-. .+++|-|.+.| +|+|-+||.-..
T Consensus        64 P~~vd~-~~i~A~~s~~G-vL~I~~PK~~~~   92 (106)
T 3l1e_A           64 PSNVDQ-SALSCSLSADG-MLTFSGPKIPSG   92 (106)
T ss_dssp             CTTBCT-TSCEEEECTTS-EEEEEEEBCCCC
T ss_pred             CCCcCh-hHcEEEECCCC-EEEEEEEccCcc
Confidence            988744 45899996566 699999998543

>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A

Probab=98.75  E-value=1e-07  Score=70.06  Aligned_cols=101  Identities=21%  Similarity=0.212  Sum_probs=74.1

Q ss_pred             ccceeeeeeeeecCceEEEEEecccccccceeEEEeecCCCceEEEEeEecCCcceeeeccceEEeeCCCCCCCCCCcee
Q 031993           20 YGPVTAAKTIYEDEQGYLIIISLPFADLKRVKVTWWNNLTHGVVKISSLSTACMPYIQRNDRTFKLTDPSPEHCPPGEFI   99 (149)
Q Consensus        20 ~GPVtaAktIyEde~gYLi~iSLPfvd~~~vkvswrNt~thGivKI~cvST~~~p~ikRhdRtFkLtdps~ehCPPGeFv   99 (149)
                      .+....+-+|||++++|.+.+-||+++.+.++|+-.+   .+.+.|++-......   ..+..|-..     -..-|.|.
T Consensus        39 ~~~~~p~~di~e~~d~~~v~~dlPGv~kedI~V~v~~---~~~L~I~g~~~~~~~---~~~~~~~~~-----Er~~g~F~  107 (151)
T 1gme_A           39 AAFANARMDWKETPEAHVFKADLPGVKKEEVKVEVED---GNVLVVSGERTKEKE---DKNDKWHRV-----ERSSGKFV  107 (151)
T ss_dssp             HHHGGGCEEEEECSSEEEEEEECTTCCGGGEEEEEET---TTEEEEEECCCCCCC---CTTCEEEEC-----CCCCCCEE
T ss_pred             ccccCCceEEEEcCCEEEEEEECCCCChHHEEEEEec---CCEEEEEEEEccccc---cCCceEEEE-----eEeccEEE
Confidence            3445567899999999999999999999999999742   468889886543221   011222211     14569999


Q ss_pred             EEeeCCCCCCCcccceeeecCCCceEEEeeecCcC
Q 031993          100 REIPLPTRIPDDAKLEAYGDETGTGLEIMVPKHRV  134 (149)
Q Consensus       100 reipL~trIPedA~leAy~de~g~~LEi~VpK~r~  134 (149)
                      |.|+||..+-.| +++|-|+ .| +|+|-+||...
T Consensus       108 R~~~LP~~vd~~-~i~A~~~-nG-vL~I~lPK~~~  139 (151)
T 1gme_A          108 RRFRLLEDAKVE-EVKAGLE-NG-VLTVTVPKAEV  139 (151)
T ss_dssp             EEEECSSCCCGG-GCEEEEE-TT-EEEEEEECCCC
T ss_pred             EEEECCCCcccc-ceEEEEE-CC-EEEEEEEccCc
Confidence            999999988554 6899994 45 79999999753

>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A

Probab=98.62  E-value=4.1e-07  Score=61.29  Aligned_cols=82  Identities=13%  Similarity=0.257  Sum_probs=59.6

Q ss_pred             ecCceEEEEEecccccccceeEEEeecCCCceEEEEeEecCCcceeeeccceEEeeCCCCCCCCCCceeEEeeCCCCCCC
Q 031993           31 EDEQGYLIIISLPFADLKRVKVTWWNNLTHGVVKISSLSTACMPYIQRNDRTFKLTDPSPEHCPPGEFIREIPLPTRIPD  110 (149)
Q Consensus        31 Ede~gYLi~iSLPfvd~~~vkvswrNt~thGivKI~cvST~~~p~ikRhdRtFkLtdps~ehCPPGeFvreipL~trIPe  110 (149)
                      +++++|.|.+.||+++.+.++|+-.    .+.+.|++-.....     .+..|-.          .||.|+|+||..+-.
T Consensus         3 ~~~~~~~v~~dlPG~~~edi~V~v~----~~~L~I~g~~~~~~-----~~~~~~~----------~ef~R~~~LP~~vd~   63 (90)
T 2y1y_A            3 MEKDRFSVNLDVKHFSPEELKVKVL----GDVIEVHGKHEERQ-----DEHGFIS----------REFHRKYRIPADVDP   63 (90)
T ss_dssp             ---CCEEEEEECTTSCGGGEEEEEE----TTEEEEEEEEEEEE-----CSSSEEE----------EEEEEEEECCTTBCG
T ss_pred             cCCCEEEEEEECCCCcHHHeEEEEE----CCEEEEEEEEeccc-----CCCCEEE----------EEEEEEEECCCCcCh
Confidence            6789999999999999999999876    47899988643210     1111211          259999999988744


Q ss_pred             cccceeeecCCCceEEEeeecCc
Q 031993          111 DAKLEAYGDETGTGLEIMVPKHR  133 (149)
Q Consensus       111 dA~leAy~de~g~~LEi~VpK~r  133 (149)
                       .++.|.|.+.| +|+|-+||..
T Consensus        64 -~~i~A~~~~~G-vL~I~~pK~~   84 (90)
T 2y1y_A           64 -LTITSSMSSDG-VLTVNGPRKQ   84 (90)
T ss_dssp             -GGCEEEECTTS-EEEEEECBC-
T ss_pred             -hHcEEEECCCC-EEEEEEEcCC
Confidence             45999997666 5999999974

>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A

Probab=98.60  E-value=3e-07  Score=70.11  Aligned_cols=96  Identities=14%  Similarity=0.241  Sum_probs=63.5

Q ss_pred             eeeeeecCceEEEEEecccccccceeEEEeecCCCceEEEEeEecCCcceeeeccceEEeeCCCCCCCCCCceeEEeeCC
Q 031993           26 AKTIYEDEQGYLIIISLPFADLKRVKVTWWNNLTHGVVKISSLSTACMPYIQRNDRTFKLTDPSPEHCPPGEFIREIPLP  105 (149)
Q Consensus        26 AktIyEde~gYLi~iSLPfvd~~~vkvswrNt~thGivKI~cvST~~~p~ikRhdRtFkLtdps~ehCPPGeFvreipL~  105 (149)
                      +-.|+|+++.|.|.+-||.++.+.++|+-.    .|.+.|++--....     .+..|-.          .||.|.|+||
T Consensus        65 ~~dv~e~~d~~~v~~dlPG~~~edI~V~v~----~~~L~I~g~~~~~~-----~~~~~~~----------reF~R~~~LP  125 (175)
T 2klr_A           65 LSEMRLEKDRFSVNLDVKHFSPEELKVKVL----GDVIEVHGKHEERQ-----DEHGFIS----------REFHRKYRIP  125 (175)
T ss_dssp             ----CCCCSEEEEEECCSSCCGGGEEEEEE----TTEEEEEEEEEEEE-----ETTEEEE----------EEEEEEEECT
T ss_pred             ceEEEEcCCeEEEEEECCCCChHHEEEEEE----CCEEEEEEEEcccc-----cCCceEE----------EEEEEEEECC
Confidence            468999999999999999999999999886    47899988653221     1112211          1499999999


Q ss_pred             CCCCCcccceeeecCCCceEEEeeecCcCCCcceeEE
Q 031993          106 TRIPDDAKLEAYGDETGTGLEIMVPKHRVGPEEHEVF  142 (149)
Q Consensus       106 trIPedA~leAy~de~g~~LEi~VpK~r~gpEEhEVr  142 (149)
                      ..+-. .+++|-|.+.|- |+|-+||......++.+.
T Consensus       126 ~~Vd~-~~i~A~~s~dGv-L~I~lPK~~~~~~~r~I~  160 (175)
T 2klr_A          126 ADVDP-LTITSSLSSDGV-LTVNGPRKQVSGPERTIP  160 (175)
T ss_dssp             TTCCT-TTCEEEECTTSC-EEEEEECC----------
T ss_pred             CCcCh-hHeEEEEcCCCE-EEEEEECCCCCCCCeEEE
Confidence            88733 358999976674 999999974332234433

>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A

Probab=98.60  E-value=4.7e-07  Score=60.78  Aligned_cols=83  Identities=16%  Similarity=0.212  Sum_probs=63.2

Q ss_pred             eeecCceEEEEEecccccccceeEEEeecCCCceEEEEeEecCCcceeeeccceEEeeCCCCCCCCCCceeEEeeCCCCC
Q 031993           29 IYEDEQGYLIIISLPFADLKRVKVTWWNNLTHGVVKISSLSTACMPYIQRNDRTFKLTDPSPEHCPPGEFIREIPLPTRI  108 (149)
Q Consensus        29 IyEde~gYLi~iSLPfvd~~~vkvswrNt~thGivKI~cvST~~~p~ikRhdRtFkLtdps~ehCPPGeFvreipL~trI  108 (149)
                      +.|+++.|.+.+-||.++.+.++|+-.    .|.+.|++-......     ++-|          --|+|.|.|+||..+
T Consensus         2 ~~E~~~~~~v~~dlPG~~~edi~V~v~----~~~L~I~g~~~~~~~-----~~~~----------~~~~F~R~~~LP~~v   62 (85)
T 3q9p_A            2 GSHTADRWRVSLDVNHFAPDELTVKTK----DGVVEITGKHAARQD-----EHGY----------ISRCFTRKYTLPPGV   62 (85)
T ss_dssp             -CCCCCEEEEEEECTTTCCSEEEEEEE----TTEEEEEEEEC------------C----------CCEEEEEEEECCTTC
T ss_pred             ccCcCCEEEEEEECCCCChHHEEEEEE----CCEEEEEEEEccccC-----CCCE----------EEEEEEEEEECCCCc
Confidence            579999999999999999999999876    478999987443210     1111          247999999999877


Q ss_pred             CCcccceeeecCCCceEEEeeecC
Q 031993          109 PDDAKLEAYGDETGTGLEIMVPKH  132 (149)
Q Consensus       109 PedA~leAy~de~g~~LEi~VpK~  132 (149)
                      -.| +++|-|.+.| +|.|-+||-
T Consensus        63 d~~-~i~A~~~~~G-vL~I~lPK~   84 (85)
T 3q9p_A           63 DPT-QVSSSLSPEG-TLTVEAPMP   84 (85)
T ss_dssp             CGG-GCEEEECTTS-EEEEEEECC
T ss_pred             ChH-HcEEEECCCC-EEEEEEEcC
Confidence            433 6899998777 599999984

>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A

Probab=98.60  E-value=6.5e-07  Score=62.93  Aligned_cols=92  Identities=17%  Similarity=0.190  Sum_probs=69.5

Q ss_pred             eeeeeeeecCceEEEEEecccccccceeEEEeecCCCceEEEEeEecCCcceeeeccceEEeeCCCCCCCCCCceeEEee
Q 031993           24 TAAKTIYEDEQGYLIIISLPFADLKRVKVTWWNNLTHGVVKISSLSTACMPYIQRNDRTFKLTDPSPEHCPPGEFIREIP  103 (149)
Q Consensus        24 taAktIyEde~gYLi~iSLPfvd~~~vkvswrNt~thGivKI~cvST~~~p~ikRhdRtFkLtdps~ehCPPGeFvreip  103 (149)
                      .-+-+|+|++++|.+.+.||+++.+.++|+..+.   +.+.|++-.....      +..|-..    |- .- .|.|.|+
T Consensus        24 ~P~~di~e~~~~~~v~~~lPG~~~edi~V~v~~~---~~L~I~g~~~~~~------~~~~~~~----Er-~~-~f~R~~~   88 (123)
T 3aab_A           24 YPPVDMYEEGGYLVVVADLAGFNKEKIKARVSGQ---NELIIEAEREITE------PGVKYLT----QR-PK-YVRKVIR   88 (123)
T ss_dssp             CSCEEEEEETTEEEEEEECCSCCGGGCEEEEETT---TEEEEEEECCCCC------CSCEEEE----CS-CS-EEEEEEE
T ss_pred             CCcEEEEEcCCEEEEEEECCCCCHHHEEEEEeCC---CEEEEEEEEeccC------CCeEEEE----EE-eE-EEEEEEE
Confidence            3467999999999999999999999999998752   8899998765432      2222222    22 22 7999999


Q ss_pred             CCCCCCCcccc-eeeecCCCceEEEeeecCc
Q 031993          104 LPTRIPDDAKL-EAYGDETGTGLEIMVPKHR  133 (149)
Q Consensus       104 L~trIPedA~l-eAy~de~g~~LEi~VpK~r  133 (149)
                      ||..+-.+ ++ .|-|+ .| +|+|-+||..
T Consensus        89 LP~~vd~~-~i~~A~~~-~G-vL~I~lPK~~  116 (123)
T 3aab_A           89 LPYNVAKD-AEISGKYE-NG-VLTIRIPIAG  116 (123)
T ss_dssp             CSSEECTT-CCCEEEEE-TT-EEEEEEEGGG
T ss_pred             CCCCcCcc-hhCeeEEc-CC-EEEEEEEcCC
Confidence            99987443 56 88885 34 7999999974

>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}

Probab=98.15  E-value=1.1e-05  Score=66.72  Aligned_cols=90  Identities=13%  Similarity=0.172  Sum_probs=71.4

Q ss_pred             ceeeeeeeeecCc----eEEEEEecccccccceeEEEeecCCCceEEEEeEecCCcceeeeccceEEeeCCCCCCCCCCc
Q 031993           22 PVTAAKTIYEDEQ----GYLIIISLPFADLKRVKVTWWNNLTHGVVKISSLSTACMPYIQRNDRTFKLTDPSPEHCPPGE   97 (149)
Q Consensus        22 PVtaAktIyEde~----gYLi~iSLPfvd~~~vkvswrNt~thGivKI~cvST~~~p~ikRhdRtFkLtdps~ehCPPGe   97 (149)
                      ....+.+|||+++    .|.|.+-||.++.+.++|+-.    +|.+.|++-.....                .+--.-|+
T Consensus        96 ~~~p~vDi~E~~~dgk~~~~v~~dlPG~~~edI~V~v~----~~~L~I~ge~~~~~----------------e~~r~~g~  155 (314)
T 2bol_A           96 ELDFLKDAYEVGKDGRLHFKVYFNVKNFKAEEITIKAD----KNKLVVRAQKSVAC----------------GDAAMSES  155 (314)
T ss_dssp             TTGGGGGCEEECTTSSEEEEEEEECTTCCTTTEEEEEE----TTEEEEEECCBSST----------------TCCCBCCC
T ss_pred             cCCCccceEEcCCCCceEEEEEEECCCCchHHeEEEEE----CCEEEEEEEEeccC----------------CCCEEEEE
Confidence            3445789999999    999999999999999999855    68899988543211                01145699


Q ss_pred             eeEEeeCCCCCCCcccceeeecCCCceEEEeeecCc
Q 031993           98 FIREIPLPTRIPDDAKLEAYGDETGTGLEIMVPKHR  133 (149)
Q Consensus        98 FvreipL~trIPedA~leAy~de~g~~LEi~VpK~r  133 (149)
                      |.|.|.||..+- -.+++|-|...| +|.|-+||..
T Consensus       156 F~R~~~LP~~Vd-~e~i~A~~~~nG-VL~I~lPK~~  189 (314)
T 2bol_A          156 VGRSIPLPPSVD-RNHIQATITTDD-VLVIEAPVNE  189 (314)
T ss_dssp             EEEEEECCTTBC-GGGCEEEECSSS-EEEEEEEBSS
T ss_pred             EEEEEECCCCcc-ccccEEEEeCCC-EEEEEEeccC
Confidence            999999999883 346899998777 5999999974

>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}

Probab=97.13  E-value=0.0026  Score=52.51  Aligned_cols=87  Identities=18%  Similarity=0.124  Sum_probs=59.8

Q ss_pred             eeeeecC-c--eEEEEEec-ccccccceeEEEeecCCCceEEEEeEecCCcceeeeccceEEeeCCCCCCCCCCceeEEe
Q 031993           27 KTIYEDE-Q--GYLIIISL-PFADLKRVKVTWWNNLTHGVVKISSLSTACMPYIQRNDRTFKLTDPSPEHCPPGEFIREI  102 (149)
Q Consensus        27 ktIyEde-~--gYLi~iSL-Pfvd~~~vkvswrNt~thGivKI~cvST~~~p~ikRhdRtFkLtdps~ehCPPGeFvrei  102 (149)
                      -+|.|++ +  .|.+-+.| |.++.+.++|+-.    .|.+.|++-......-..|.            --.=|+|.|.|
T Consensus       223 ~~i~e~~~~~~~~~v~~~ldPG~~~edi~V~v~----~~~LtI~ge~~~~~~~~~~~------------Er~~g~F~R~~  286 (314)
T 2bol_A          223 LEIVTAEDGSKKIHLELKVDPHFAPKDVKVWAK----GNKVYVHGVTGKEEKTENAS------------HSEHREFYKAF  286 (314)
T ss_dssp             EEEEECTTSCEEEEEEEECCTTCCGGGEEEEES----SSEEEEEEEEC------------------------CEEEEEEE
T ss_pred             CcEEEecCCCcEEEEEEEcCCCCChHHeEEEEE----CCEEEEEEEEeccCCceEEE------------EEeeeEEEEEE
Confidence            4677766 3  56666777 9999999999864    67899998754332111111            23458999999


Q ss_pred             eCCCCCCCcccceeeecCCCceEEEeeecC
Q 031993          103 PLPTRIPDDAKLEAYGDETGTGLEIMVPKH  132 (149)
Q Consensus       103 pL~trIPedA~leAy~de~g~~LEi~VpK~  132 (149)
                      .||..+=. .+++|-|+ .| ||.|-+||.
T Consensus       287 ~LP~~vd~-~~i~A~~~-dG-vL~i~~Pk~  313 (314)
T 2bol_A          287 VTPEVVDA-SKTQAEIV-DG-LMVVEAPLF  313 (314)
T ss_dssp             ECSSEECG-GGCEEEEE-TT-EEEEEEEEE
T ss_pred             ECCCCcCh-HHeEEEEe-CC-EEEEEEecC
Confidence            99988844 56888886 45 799999985

>2k8q_A Protein SHQ1; beta-sandwich, CS domain, nucleus, structural protein; NMR {Saccharomyces cerevisiae}

Probab=89.59  E-value=1.7  Score=32.82  Aligned_cols=49  Identities=18%  Similarity=0.341  Sum_probs=39.4

Q ss_pred             ccceEEeeCCCCCCCCCCceeEEeeCCCCCCCcccceeeecCCCceEEEeeecCcCC
Q 031993           79 NDRTFKLTDPSPEHCPPGEFIREIPLPTRIPDDAKLEAYGDETGTGLEIMVPKHRVG  135 (149)
Q Consensus        79 hdRtFkLtdps~ehCPPGeFvreipL~trIPedA~leAy~de~g~~LEi~VpK~r~g  135 (149)
                      .+..|.+      ||+|  |-.-+.||.++=||..-+|-||-.--.|+|-+||.-.|
T Consensus        36 ~~~~F~F------~~~P--YyLRL~LP~~V~e~~~~kA~YD~d~~~~~VtLpK~~~G   84 (134)
T 2k8q_A           36 QENMIIF------HLSP--YYLRLRFPHELIDDERSTAQYDSKDECINVKVAKLNKN   84 (134)
T ss_dssp             CSSSEEE------CSSS--SCEEECCSSCEECCSSCEEEEETTTTEEEEEEEESSTT
T ss_pred             eCCEEEE------ecCC--eEEEecCCCeeecCCCcceeEeccCCEEEEEEeCCCCC
Confidence            5778887      5888  44559999999999999999996444499999997554

>2xcm_C SGT1-like protein, cytosolic heat shock protein 90; chaperone-protein binding complex, stress response; HET: ADP; 2.20A {Arabidopsis thaliana} PDB: 2jki_S*

Probab=88.12  E-value=3.6  Score=26.23  Aligned_cols=76  Identities=12%  Similarity=0.091  Sum_probs=47.4

Q ss_pred             eeeecCceEEEEEecccccccceeEEEeecCCCceEEEEeEecCCcceeeeccceEEeeCCCCCCCCCCceeEEeeCCCC
Q 031993           28 TIYEDEQGYLIIISLPFADLKRVKVTWWNNLTHGVVKISSLSTACMPYIQRNDRTFKLTDPSPEHCPPGEFIREIPLPTR  107 (149)
Q Consensus        28 tIyEde~gYLi~iSLPfvd~~~vkvswrNt~thGivKI~cvST~~~p~ikRhdRtFkLtdps~ehCPPGeFvreipL~tr  107 (149)
                      .-|+.++-..+.|-+|.++.+.++|.-..    ..++|++...                       ...+|..++.|...
T Consensus         6 ~W~Qt~~~V~v~i~~~~v~~~~v~v~~~~----~~l~v~~~~~-----------------------~~~~y~~~~~L~~~   58 (92)
T 2xcm_C            6 EYYQKPEEVVVTVFAKGIPKQNVNIDFGE----QILSVVIEVP-----------------------GEDAYYLQPRLFGK   58 (92)
T ss_dssp             EEEEETTEEEEEEECCSCCGGGEEEEECS----SBEEEEECCT-----------------------TSCCEEECCBBSSC
T ss_pred             cEEeCCCEEEEEEEECCCChHHeEEEEEC----CEEEEEEEcC-----------------------CCcEEEEeeEcCCc
Confidence            45666666667777777777777776542    2355554321                       12479999999999


Q ss_pred             CCCcccceeeecCCCceEEEeeecCc
Q 031993          108 IPDDAKLEAYGDETGTGLEIMVPKHR  133 (149)
Q Consensus       108 IPedA~leAy~de~g~~LEi~VpK~r  133 (149)
                      |-.|.---.+.   +..|||.+.|..
T Consensus        59 I~~~~s~~~~~---~~~l~i~L~K~~   81 (92)
T 2xcm_C           59 IIPDKCKYEVL---STKIEICLAKAD   81 (92)
T ss_dssp             BCGGGCEEEEC---SSCEEEEEEBSS
T ss_pred             cCchhEEEEEE---CCEEEEEEEcCC
Confidence            86553222222   345999999964

>1rl1_A Suppressor of G2 allele of SKP1 homolog; beta sandwich, 7 beta strands, similar to P23, lacking LAST beta strand SEEN in P23, protein degradation; NMR {Homo sapiens} SCOP: b.15.1.3

Probab=87.37  E-value=4.9  Score=26.93  Aligned_cols=77  Identities=14%  Similarity=0.113  Sum_probs=51.9

Q ss_pred             eeeeecCceEEEEEecccccccceeEEEeecCCCceEEEEeEecCCcceeeeccceEEeeCCCCCCCCCCceeEEeeCCC
Q 031993           27 KTIYEDEQGYLIIISLPFADLKRVKVTWWNNLTHGVVKISSLSTACMPYIQRNDRTFKLTDPSPEHCPPGEFIREIPLPT  106 (149)
Q Consensus        27 ktIyEde~gYLi~iSLPfvd~~~vkvswrNt~thGivKI~cvST~~~p~ikRhdRtFkLtdps~ehCPPGeFvreipL~t  106 (149)
                      -+.|+.++-..|.|-||.++...++|.-.    ...++|++...                       ...+|.+++.|+.
T Consensus        12 ~~W~Qt~~~V~v~i~l~~v~~~~v~v~~~----~~~l~v~~~~~-----------------------~~~~y~~~~~L~~   64 (114)
T 1rl1_A           12 YDWYQTESQVVITLMIKNVQKNDVNVEFS----EKELSALVKLP-----------------------SGEDYNLKLELLH   64 (114)
T ss_dssp             EEEEECSSEEEEEECCCSCCGGGEEEECS----SSCEEEEEECT-----------------------TSSEEEEEECBSS
T ss_pred             ccEEeCCCEEEEEEEeCCCCHHHCEEEEE----cCEEEEEEEeC-----------------------CCcEEEEEeeCCC
Confidence            46788888888889999887777887654    33466665421                       1147889999999


Q ss_pred             CCCCcccceeeecCCCceEEEeeecCc
Q 031993          107 RIPDDAKLEAYGDETGTGLEIMVPKHR  133 (149)
Q Consensus       107 rIPedA~leAy~de~g~~LEi~VpK~r  133 (149)
                      .|=.|.---.+  +. ..|||.++|..
T Consensus        65 ~I~~e~s~~~~--~~-~~l~i~L~K~~   88 (114)
T 1rl1_A           65 PIIPEQSTFKV--LS-TKIEIKLKKPE   88 (114)
T ss_dssp             CCCGGGEEEEE--CS-SSEEEEEECSS
T ss_pred             cCCccccEEEE--EC-CEEEEEEEcCC
Confidence            98554322222  22 45999999964

>3eud_A Protein SHQ1; CS domain HSP20-like domain SHQ1 H/ACA snoRNP ribosome biogenesis, nucleus, nuclear protein; HET: MSE; 2.40A {Saccharomyces cerevisiae}

Probab=83.04  E-value=8.5  Score=28.60  Aligned_cols=52  Identities=17%  Similarity=0.279  Sum_probs=41.2

Q ss_pred             eeeccceEEeeCCCCCCCCCCceeEEeeCCCCCCCcccceeeecCCCceEEEeeecCcCC
Q 031993           76 IQRNDRTFKLTDPSPEHCPPGEFIREIPLPTRIPDDAKLEAYGDETGTGLEIMVPKHRVG  135 (149)
Q Consensus        76 ikRhdRtFkLtdps~ehCPPGeFvreipL~trIPedA~leAy~de~g~~LEi~VpK~r~g  135 (149)
                      +-=.++.|++.      |+|  |-.-+-||.+|=||.+-.|-||-.--.+.|-+||.-.|
T Consensus        47 i~vd~~~F~F~------~~P--YyLRL~lP~~vved~~~~A~YD~d~g~~~v~lpK~~~G   98 (115)
T 3eud_A           47 IIIQENMIIFH------LSP--YYLRLRFPHELIDDERSTAQYDSKDECINVKVAKLNKN   98 (115)
T ss_dssp             EEEETTEEEEE------ETT--EEEEEECSSCEECSTTCEEEEETTTTEEEEEEEESSTT
T ss_pred             EEEeCCEEEEe------cCC--eEEEEecCcceecCCCcceEEeCCCcEEEEEEcCCcCC
Confidence            33456788875      888  55569999999999998999995555599999998555

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	149
d1shsa_	115	Small heat shock protein {Archaeon Methanococcus j	98.83
d1gmea_	150	Small heat shock protein {Wheat (Triticum aestivum	98.6

>d1shsa_ b.15.1.1 (A:) Small heat shock protein {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: All beta proteins
fold: HSP20-like chaperones
superfamily: HSP20-like chaperones
family: HSP20
domain: Small heat shock protein
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=98.83  E-value=3.4e-08  Score=66.60  Aligned_cols=92  Identities=21%  Similarity=0.294  Sum_probs=70.5

Q ss_pred             eeeeecCceEEEEEecccccccceeEEEeecCCCceEEEEeEecCCcceeeeccceEEeeCCCCCCCCCCceeEEeeCCC
Q 031993           27 KTIYEDEQGYLIIISLPFADLKRVKVTWWNNLTHGVVKISSLSTACMPYIQRNDRTFKLTDPSPEHCPPGEFIREIPLPT  106 (149)
Q Consensus        27 ktIyEde~gYLi~iSLPfvd~~~vkvswrNt~thGivKI~cvST~~~p~ikRhdRtFkLtdps~ehCPPGeFvreipL~t  106 (149)
                      -+|+|++++|.|.+.||.++.+.+.|+-.    .+.+.|++--.   +...-.++.+...    +.+..|.|.|+|+||.
T Consensus        13 vdi~e~~~~~~i~~~lPG~~~edi~v~v~----~~~l~I~~~~~---~~~~~~~~~~~~~----~~~~~~~f~r~~~lP~   81 (115)
T d1shsa_          13 ISIIEGDQHIKVIAWLPGVNKEDIILNAV----GDTLEIRAKRS---PLMITESERIIYS----EIPEEEEIYRTIKLPA   81 (115)
T ss_dssp             EEEEECSSEEEEEEECTTCCGGGEEEEEE----TTEEEEEEECC---CCCCCTTCEEEEE----CSCCCCEEEEEEECSS
T ss_pred             eEEEEcCCEEEEEEECCCCCHHHEEEEEE----CCEEEEEEEec---cccccccccEEEE----eeecccceEEEEecCC
Confidence            38999999999999999999999999876    46788876432   2222233333333    5678899999999999


Q ss_pred             CCCCcccceeeecCCCceEEEeeecC
Q 031993          107 RIPDDAKLEAYGDETGTGLEIMVPKH  132 (149)
Q Consensus       107 rIPedA~leAy~de~g~~LEi~VpK~  132 (149)
                      .| +..++.|-|+ .| +|+|.+||.
T Consensus        82 ~v-d~~~i~A~~~-nG-vL~I~lpK~  104 (115)
T d1shsa_          82 TV-KEENASAKFE-NG-VLSVILPKA  104 (115)
T ss_dssp             CB-CGGGCEEEEE-TT-EEEEEEEBC
T ss_pred             ce-eecceEEEEE-CC-EEEEEEEeC
Confidence            88 4467888885 45 599999996

>d1gmea_ b.15.1.1 (A:) Small heat shock protein {Wheat (Triticum aestivum) [TaxId: 4565]}

class: All beta proteins
fold: HSP20-like chaperones
superfamily: HSP20-like chaperones
family: HSP20
domain: Small heat shock protein
species: Wheat (Triticum aestivum) [TaxId: 4565]

Probab=98.60  E-value=3e-07  Score=65.04  Aligned_cols=103  Identities=21%  Similarity=0.254  Sum_probs=70.3

Q ss_pred             eeeeeecCceEEEEEecccccccceeEEEeecCCCceEEEEeEecCCcceeeeccceEEeeCCCCCCCCCCceeEEeeCC
Q 031993           26 AKTIYEDEQGYLIIISLPFADLKRVKVTWWNNLTHGVVKISSLSTACMPYIQRNDRTFKLTDPSPEHCPPGEFIREIPLP  105 (149)
Q Consensus        26 AktIyEde~gYLi~iSLPfvd~~~vkvswrNt~thGivKI~cvST~~~p~ikRhdRtFkLtdps~ehCPPGeFvreipL~  105 (149)
                      .-.|+|++++|.|.+.||.++.+.++|+-.+   ..++.|++.-+.   --.-.+..+....     -.-|.|.|.|.||
T Consensus        44 ~~dv~e~~~~~~i~~~lPG~~~edi~v~v~~---~~~l~i~~~~~~---~~~~~~~~~~~~e-----~~~~~f~r~~~LP  112 (150)
T d1gmea_          44 RMDWKETPEAHVFKADLPGVKKEEVKVEVED---GNVLVVSGERTK---EKEDKNDKWHRVE-----RSSGKFVRRFRLL  112 (150)
T ss_dssp             CEEEEECSSEEEEEEECTTCCGGGEEEEEET---TTEEEEEECCCC---CCCCTTCEEEECC-----CCCCCEEEEEECS
T ss_pred             ceeEEECCCEEEEEEEeCCCccCCEEEEEEE---ccceeEEEEEec---ccccccceeeeee-----eccceEEEEEECC
Confidence            4579999999999999999999999998642   235566654321   1111222232221     1349999999999


Q ss_pred             CCCCCcccceeeecCCCceEEEeeecCcC-CCcceeEE
Q 031993          106 TRIPDDAKLEAYGDETGTGLEIMVPKHRV-GPEEHEVF  142 (149)
Q Consensus       106 trIPedA~leAy~de~g~~LEi~VpK~r~-gpEEhEVr  142 (149)
                      ..+ +-.+++|-|. .| +|+|-+||... .|+.+.|.
T Consensus       113 ~~v-d~~~i~A~~~-nG-vL~I~lpK~~~~~~~~~~I~  147 (150)
T d1gmea_         113 EDA-KVEEVKAGLE-NG-VLTVTVPKAEVKKPEVKAIQ  147 (150)
T ss_dssp             SCC-CGGGCEEEEE-TT-EEEEEEECCCCCTTCCCCCC
T ss_pred             CCe-eeceeEEEEE-CC-EEEEEEEcCCcCCCCceEEe
Confidence            888 5567788884 56 79999999743 34444443