Citrus Sinensis ID: 036665

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440
MATISKLTNPAVSSSSLKPRSSSSSLPKSLISLQTKTGFNSKVASSQLTLRNNHPLKASLVVKCSQSGGNGSSAKRTTLHDLYEQEGQSPWYDNLCRPVTDLLPLIASGVRGVTSNPAIFQKAISSSNAYNDQFRELVQSGKDIEAAYWELVIKDIQDACKLFESIYDETNGGDGYVSVEVSPRLADDTQGTVEAAKWLHKVVNRPNVYIKIPATAPCVPSIKEVISQGISVNVTLIFSLARYEEVIDAYLDGLEASGLSDLSRVTSVASFFVSRVDTLIDKMLEKIGTPEALDLRGKAAVAQAALAYQLYQKKFSGPRWDALVKKGAKKQRLLWASTSVKNPAYPDTLYVAPLIGPDTVSTMPDQALQAFVDHGAVSRTIDLNVSEAEGIYSALEKLGIDWNYVGTQLELEGVDSFKKSFDSLLDTLQEKANSLKLVSL
cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEccccccccccccccHHHHHHHHccccccccccccccccHHHHHHcccccccccHHHHHHHHcccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEccccccccHHHHHHHHHHHHHHHccccEEEEcccccccHHHHHHHHHccccEEEEEcccHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHcccccHHHHcccHHHHHHHHHHHHHHHHHccHHHHHHHHccccccccHHHccccccccccccccccccccccccccccHHHHHHHHHcccccccccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccc
cccHEccccccccHHcccccccccccccEEEccccccccccEEccccEEEEccccccccEEEEEEccccccccccccHHHHHHHHccccEEEccccHHHHcHHHHHHcccEEEcccHHHHHHHHHccccHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEEEccHHHHcHHHHHHHHHHHHHHcccccEEEEEcccHccHHHHHHHHHccccEEEEEEEcHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHcccHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHccccccccEEEcccccccccccEEEEEccccccccccccHHHHHHHHHcccccccccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccc
matiskltnpavsssslkprssssslpksLISLqtktgfnskvassqltlrnnhplkASLVVKCsqsggngssakrttLHDLYeqegqspwydnlcrpvtdllpliasgvrgvtsnpAIFQKAISSSNAYNDQFRELVQSGKDIEAAYWELVIKDIQDACKLFESIYdetnggdgyvsvevsprladdtqGTVEAAKWLHKvvnrpnvyikipatapcvpsikEVISQGISVNVTLIFSLARYEEVIDAYLDGLeasglsdlsrvTSVASFFVSRVDTLIDKMLEkigtpealdLRGKAAVAQAALAYQLYQKKFSGPRWDALVKKGAKKQRLLWAStsvknpaypdtlyvapligpdtvstmpdQALQAFVDHGAVSRTIDLNVSEAEGIYSALEKLGIDWNYVGTQLELEGVDSFKKSFDSLLDTLQEKANSLKLVSL
matiskltnpavsssslkprssssslPKSLISLQTKTGFNSKVASSQLTLRNNHPLKASLVVKCsqsggngssakrtTLHDLYEQEGQSPWYDNLCRPVTDLLPLIASGVRGVTSNPAIFQKAISSSNAYNDQFRELVQSGKDIEAAYWELVIKDIQDACKLFESIYDETNGGDGYVSVEVSPRLADDTQGTVEAAKWLHKVVNRPNVYIKIPATAPCVPSIKEVISQGISVNVTLIFSLARYEEVIDAYLDGLEASGLSDLSRVTSVASFFVSRVDTLIDKMLEKIGTPEALDLRGKAAVAQAALAYQLYQKKFSGPRWDALVKKGAKKQRLLwastsvknpaypDTLYVAPLIGPDTVSTMPDQALQAFVDHGAVSRTIDLNVSEAEGIYSALEKLGIDWNYVGTQLELEGVDSFKKSFDSLLDTLQekanslklvsl
MATISKLTNPAVsssslkprssssslpkslislQTKTGFNSKVASSQLTLRNNHPLKASLVVKCSQSGGNGSSAKRTTLHDLYEQEGQSPWYDNLCRPVTDLLPLIASGVRGVTSNPAIFQKAISSSNAYNDQFRELVQSGKDIEAAYWELVIKDIQDACKLFESIYDETNGGDGYVSVEVSPRLADDTQGTVEAAKWLHKVVNRPNVYIKIPATAPCVPSIKEVISQGISVNVTLIFSLARYEEVIDAYLDGLEASGLSDLSRVTSVASFFVSRVDTLIDKMLEKIGTPEALDLRGkaavaqaalayqlyqkkFSGPRWDALVKKGAKKQRLLWASTSVKNPAYPDTLYVAPLIGPDTVSTMPDQALQAFVDHGAVSRTIDLNVSEAEGIYSALEKLGIDWNYVGTQLELEGVDSFKKSFDSLLDTLQEKANSLKLVSL
*********************************************************************************LYE*EGQSPWYDNLCRPVTDLLPLIASGVRGVTSNPAIFQKAISSSNAYNDQFRELVQSGKDIEAAYWELVIKDIQDACKLFESIYDETNGGDGYVSVEVSPRLADDTQGTVEAAKWLHKVVNRPNVYIKIPATAPCVPSIKEVISQGISVNVTLIFSLARYEEVIDAYLDGLEASGLSDLSRVTSVASFFVSRVDTLIDKMLEKIGTPEALDLRGKAAVAQAALAYQLYQKKFSGPRWDALVKKGAKKQRLLWASTSVKNPAYPDTLYVAPLIGPDTVSTMPDQALQAFVDHGAVSRTIDLNVSEAEGIYSALEKLGIDWNYVGTQLELEGVDSFKKSFDSL****************
*******************************SLQTKTG********************************************YEQEGQSPWYDNLCRPVTDLLPLIASGVRGVTSNPAIFQKAISSSNAYNDQFRELVQSGKDIEAAYWELVIKDIQDACKLFESIYDETNGGDGYVSVEVSPRLADDTQGTVEAAKWLHKVVNRPNVYIKIPATAPCVPSIKEVISQGISVNVTLIFSLARYEEVIDAYLDGLEASGLSDLSRVTSVASFFVSRVDTLIDKMLEKIGTPEALDLRGKAAVAQAALAYQLYQKKFSGPRWDALVKKGAKKQRLLWASTSVKNPAYPDTLYVAPLIGPDTVSTMPDQALQAFVDHGA***********AEGIYSALEKLGIDWNYVGTQLELEGVDSFKKSFDSLLDTLQEKANSLKLVS*
****************************SLISLQTKTGFNSKVASSQLTLRNNHPLKASLVVKC**********KRTTLHDLYEQEGQSPWYDNLCRPVTDLLPLIASGVRGVTSNPAIFQKAISSSNAYNDQFRELVQSGKDIEAAYWELVIKDIQDACKLFESIYDETNGGDGYVSVEVSPRLADDTQGTVEAAKWLHKVVNRPNVYIKIPATAPCVPSIKEVISQGISVNVTLIFSLARYEEVIDAYLDGLEASGLSDLSRVTSVASFFVSRVDTLIDKMLEKIGTPEALDLRGKAAVAQAALAYQLYQKKFSGPRWDALVKKGAKKQRLLWASTSVKNPAYPDTLYVAPLIGPDTVSTMPDQALQAFVDHGAVSRTIDLNVSEAEGIYSALEKLGIDWNYVGTQLELEGVDSFKKSFDSLLDTLQEKANSLKLVSL
*************************LPKSLISLQTKTGFNSKVASSQLTLRNNHPLKASLVVKCSQSGGNGSSAKRTTLHDLYEQEGQSPWYDNLCRPVTDLLPLIASGVRGVTSNPAIFQKAISSSNAYNDQFRELVQSGKDIEAAYWELVIKDIQDACKLFESIYDETNGGDGYVSVEVSPRLADDTQGTVEAAKWLHKVVNRPNVYIKIPATAPCVPSIKEVISQGISVNVTLIFSLARYEEVIDAYLDGLEASGLSDLSRVTSVASFFVSRVDTLIDKMLEKIGTPEALDLRGKAAVAQAALAYQLYQKKFSGPRWDALVKKGAKKQRLLWASTSVKNPAYPDTLYVAPLIGPDTVSTMPDQALQAFVDHGAVSRTIDLNVSEAEGIYSALEKLGIDWNYVGTQLELEGVDSFKKSFDSLLDTLQEKANSL*****
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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MATISKLTNPAVSSSSLKPRSSSSSLPKSLISLQTKTGFNSKVASSQLTLRNNHPLKASLVVKCSQSGGNGSSAKRTTLHDLYEQEGQSPWYDNLCRPVTDLLPLIASGVRGVTSNPAIFQKAISSSNAYNDQFRELVQSGKDIEAAYWELVIKDIQDACKLFESIYDETNGGDGYVSVEVSPRLADDTQGTVEAAKWLHKVVNRPNVYIKIPATAPCVPSIKEVISQGISVNVTLIFSLARYEEVIDAYLDGLEASGLSDLSRVTSVASFFVSRVDTLIDKMLEKIGTPEALDLRGKAAVAQAALAYQLYQKKFSGPRWDALVKKGAKKQRLLWASTSVKNPAYPDTLYVAPLIGPDTVSTMPDQALQAFVDHGAVSRTIDLNVSEAEGIYSALEKLGIDWNYVGTQLELEGVDSFKKSFDSLLDTLQEKANSLKLVSL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query440 2.2.26 [Sep-21-2011]
A9WT40374 Transaldolase OS=Renibact yes no 0.788 0.927 0.516 3e-90
Q0RH18371 Transaldolase OS=Frankia yes no 0.784 0.929 0.491 3e-89
A0LTY8372 Transaldolase OS=Acidothe yes no 0.765 0.905 0.510 1e-87
Q2JCG8371 Transaldolase OS=Frankia yes no 0.775 0.919 0.502 1e-86
A8KYS5369 Transaldolase OS=Frankia yes no 0.788 0.940 0.511 2e-86
Q829U5372 Transaldolase 2 OS=Strept yes no 0.795 0.940 0.498 1e-85
A0QWX9371 Transaldolase OS=Mycobact yes no 0.795 0.943 0.490 1e-85
Q82M93378 Transaldolase 1 OS=Strept no no 0.788 0.917 0.504 1e-85
Q9XAC0372 Transaldolase 2 OS=Strept yes no 0.793 0.938 0.494 4e-85
B2HP98373 Transaldolase OS=Mycobact yes no 0.793 0.935 0.484 1e-84
>sp|A9WT40|TAL_RENSM Transaldolase OS=Renibacterium salmoninarum (strain ATCC 33209 / DSM 20767 / JCM 11484 / NBRC 15589 / NCIMB 2235) GN=tal PE=3 SV=1 Back     alignment and function desciption
 Score =  332 bits (851), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 184/356 (51%), Positives = 231/356 (64%), Gaps = 9/356 (2%)

Query: 87  GQSPWYDNLCRP---VTDLLPLI-ASGVRGVTSNPAIFQKAISSSNAYNDQFRELVQSGK 142
           G S W D+L R       L  LI    V GVT+NP+IFQ AIS   +Y  Q  EL   G 
Sbjct: 12  GVSIWLDDLSRERLTSGSLQKLIDEKNVVGVTTNPSIFQAAISKGTSYEQQVSELAAQGA 71

Query: 143 DIEAAYWELVIKDIQDACKLFESIYDETNGGDGYVSVEVSPRLADDTQGTVEAAKWLHKV 202
           D+EAA +++  +D+ +AC  F  I   + G DG VS+EV PR A DTQGT+E AK LH  
Sbjct: 72  DVEAAVFQITTQDVANACDFFAGIAVASKGVDGRVSIEVDPRKAWDTQGTIEEAKRLHAA 131

Query: 203 VNRPNVYIKIPATAPCVPSIKEVISQGISVNVTLIFSLARYEEVIDAYLDGLE---ASGL 259
           V + NV+IKIPAT   + +I E +  GISVNVTLIFSL RY  VI+A+L G+E   A+G 
Sbjct: 132 VGKDNVHIKIPATLEGLEAITETLGAGISVNVTLIFSLGRYRAVINAFLLGIEKAKANG- 190

Query: 260 SDLSRVTSVASFFVSRVDTLIDKMLEKIGTPEALDLRGKAAVAQAALAYQLYQKKFSGPR 319
            DLS++ SVASFFVSRVDT IDK L+ + T EA  L+GKA VA A LAYQ++++ FS  R
Sbjct: 191 HDLSQIHSVASFFVSRVDTEIDKRLDALNTDEAKSLKGKAGVANARLAYQVFEEVFSSER 250

Query: 320 WDALVKKGAKKQRLLWASTSVKNPAYPDTLYVAPLIGPDTVSTMPDQALQAFVDHGAVS- 378
           W  L + GA  QR LWAST VK+PAYPDTLYV  L+ P+ V+TMP++ L A  DHG VS 
Sbjct: 251 WALLAEAGALPQRPLWASTGVKDPAYPDTLYVTELVAPNVVNTMPEKTLDATADHGVVSG 310

Query: 379 RTIDLNVSEAEGIYSALEKLGIDWNYVGTQLELEGVDSFKKSFDSLLDTLQEKANS 434
            TI     EA G+ +ALE LGI +N V   LE EG++ F  S+  LLD +Q+  NS
Sbjct: 311 NTISGRYDEANGVLNALEGLGISYNEVVALLEKEGLEKFVASWKELLDHVQDALNS 366
Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.
Renibacterium salmoninarum (strain ATCC 33209 / DSM 20767 / JCM 11484 / NBRC 15589 / NCIMB 2235) (taxid: 288705)
EC: 2EC: .EC: 2EC: .EC: 1EC: .EC: 2
>sp|Q0RH18|TAL_FRAAA Transaldolase OS=Frankia alni (strain ACN14a) GN=tal PE=3 SV=1 Back     alignment and function description
>sp|A0LTY8|TAL_ACIC1 Transaldolase OS=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) GN=tal PE=3 SV=1 Back     alignment and function description
>sp|Q2JCG8|TAL_FRASC Transaldolase OS=Frankia sp. (strain CcI3) GN=tal PE=3 SV=1 Back     alignment and function description
>sp|A8KYS5|TAL_FRASN Transaldolase OS=Frankia sp. (strain EAN1pec) GN=tal PE=3 SV=1 Back     alignment and function description
>sp|Q829U5|TAL2_STRAW Transaldolase 2 OS=Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NCIMB 12804 / NRRL 8165 / MA-4680) GN=tal2 PE=3 SV=1 Back     alignment and function description
>sp|A0QWX9|TAL_MYCS2 Transaldolase OS=Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) GN=tal PE=1 SV=1 Back     alignment and function description
>sp|Q82M93|TAL1_STRAW Transaldolase 1 OS=Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NCIMB 12804 / NRRL 8165 / MA-4680) GN=tal1 PE=3 SV=1 Back     alignment and function description
>sp|Q9XAC0|TAL2_STRCO Transaldolase 2 OS=Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145) GN=tal2 PE=3 SV=1 Back     alignment and function description
>sp|B2HP98|TAL_MYCMM Transaldolase OS=Mycobacterium marinum (strain ATCC BAA-535 / M) GN=tal PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query440
217795376440 transaldolase [Dimocarpus longan] 1.0 1.0 0.875 0.0
224053577440 predicted protein [Populus trichocarpa] 0.995 0.995 0.854 0.0
224075445436 predicted protein [Populus trichocarpa] 0.984 0.993 0.853 0.0
77999311438 transaldolase-like protein [Solanum tube 0.993 0.997 0.825 0.0
225425280441 PREDICTED: transaldolase isoform 1 [Viti 0.990 0.988 0.844 0.0
449468904441 PREDICTED: transaldolase-like [Cucumis s 0.993 0.990 0.825 0.0
255543230441 Transaldolase, putative [Ricinus communi 0.997 0.995 0.830 0.0
356527464439 PREDICTED: transaldolase-like [Glycine m 0.984 0.986 0.822 0.0
357501523443 Transaldolase [Medicago truncatula] gi|3 0.993 0.986 0.803 0.0
388509452443 unknown [Medicago truncatula] 0.993 0.986 0.800 0.0
>gi|217795376|gb|ACK56136.1| transaldolase [Dimocarpus longan] Back     alignment and taxonomy information
 Score =  758 bits (1958), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 385/440 (87%), Positives = 410/440 (93%)

Query: 1   MATISKLTNPAVSSSSLKPRSSSSSLPKSLISLQTKTGFNSKVASSQLTLRNNHPLKASL 60
           MAT+SKL+NP   + SL+ RSSSSSLP++ I   ++TG   K ASS L LR NH L+   
Sbjct: 1   MATVSKLSNPTTPALSLQSRSSSSSLPRTFIGFNSRTGSAFKFASSHLFLRKNHALRHPF 60

Query: 61  VVKCSQSGGNGSSAKRTTLHDLYEQEGQSPWYDNLCRPVTDLLPLIASGVRGVTSNPAIF 120
           VVKCS  GGNG++AKRTTLHDLYE+EGQSPWYDNLCRPVTDLLPLIASGVRGVTSNPAIF
Sbjct: 61  VVKCSAPGGNGNAAKRTTLHDLYEREGQSPWYDNLCRPVTDLLPLIASGVRGVTSNPAIF 120

Query: 121 QKAISSSNAYNDQFRELVQSGKDIEAAYWELVIKDIQDACKLFESIYDETNGGDGYVSVE 180
           QKAISSSNAYNDQF+ELVQSGKDIEAAYWELVIKDIQ+ACKLFE IYDET+GGDGYVSVE
Sbjct: 121 QKAISSSNAYNDQFKELVQSGKDIEAAYWELVIKDIQNACKLFEPIYDETDGGDGYVSVE 180

Query: 181 VSPRLADDTQGTVEAAKWLHKVVNRPNVYIKIPATAPCVPSIKEVISQGISVNVTLIFSL 240
           VSP+LADDT GTVEAAKWLHKVVN+PNVYIKIPATAPCVPSIKEVI+QGISVNVTLIFSL
Sbjct: 181 VSPKLADDTNGTVEAAKWLHKVVNQPNVYIKIPATAPCVPSIKEVIAQGISVNVTLIFSL 240

Query: 241 ARYEEVIDAYLDGLEASGLSDLSRVTSVASFFVSRVDTLIDKMLEKIGTPEALDLRGKAA 300
           ARYE VIDAYLD LEASGLSDLSRVTSVASFFVSRVDTL+DKMLEKIGTPEALDLRGKAA
Sbjct: 241 ARYEAVIDAYLDDLEASGLSDLSRVTSVASFFVSRVDTLVDKMLEKIGTPEALDLRGKAA 300

Query: 301 VAQAALAYQLYQKKFSGPRWDALVKKGAKKQRLLWASTSVKNPAYPDTLYVAPLIGPDTV 360
           VAQAALAY+LYQKKFSGPRW+ALVKKGAKKQRLLWASTSVKNPAYPDTLYVAPLIGPDTV
Sbjct: 301 VAQAALAYKLYQKKFSGPRWEALVKKGAKKQRLLWASTSVKNPAYPDTLYVAPLIGPDTV 360

Query: 361 STMPDQALQAFVDHGAVSRTIDLNVSEAEGIYSALEKLGIDWNYVGTQLELEGVDSFKKS 420
           STMPDQALQAF+DHG VSRTID NVS+AEGIYSALEKLGIDW+YVG QLE+EGVDSF KS
Sbjct: 361 STMPDQALQAFIDHGTVSRTIDSNVSDAEGIYSALEKLGIDWSYVGNQLEVEGVDSFMKS 420

Query: 421 FDSLLDTLQEKANSLKLVSL 440
           FDSLLDTLQEKANSLKLVSL
Sbjct: 421 FDSLLDTLQEKANSLKLVSL 440

Source: Dimocarpus longan

Species: Dimocarpus longan

Genus: Dimocarpus

Family: Sapindaceae

Order: Sapindales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224053577|ref|XP_002297881.1| predicted protein [Populus trichocarpa] gi|222845139|gb|EEE82686.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224075445|ref|XP_002304636.1| predicted protein [Populus trichocarpa] gi|222842068|gb|EEE79615.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|77999311|gb|ABB17002.1| transaldolase-like protein [Solanum tuberosum] Back     alignment and taxonomy information
>gi|225425280|ref|XP_002271514.1| PREDICTED: transaldolase isoform 1 [Vitis vinifera] gi|296085535|emb|CBI29267.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|449468904|ref|XP_004152161.1| PREDICTED: transaldolase-like [Cucumis sativus] gi|449522652|ref|XP_004168340.1| PREDICTED: transaldolase-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|255543230|ref|XP_002512678.1| Transaldolase, putative [Ricinus communis] gi|223548639|gb|EEF50130.1| Transaldolase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|356527464|ref|XP_003532330.1| PREDICTED: transaldolase-like [Glycine max] Back     alignment and taxonomy information
>gi|357501523|ref|XP_003621050.1| Transaldolase [Medicago truncatula] gi|355496065|gb|AES77268.1| Transaldolase [Medicago truncatula] Back     alignment and taxonomy information
>gi|388509452|gb|AFK42792.1| unknown [Medicago truncatula] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query440
TAIR|locus:2181665438 TRA2 "transaldolase 2" [Arabid 0.990 0.995 0.763 2.4e-172
UNIPROTKB|O06812373 tal "Transaldolase" [Mycobacte 0.770 0.908 0.449 2.6e-70
TIGR_CMR|CJE_0329325 CJE_0329 "transaldolase" [Camp 0.584 0.790 0.327 3.5e-27
POMBASE|SPCC1020.06c322 tal1 "transaldolase (predicted 0.154 0.211 0.383 0.00018
UNIPROTKB|Q3AFT3214 tal "Probable transaldolase" [ 0.138 0.285 0.424 0.00079
TIGR_CMR|CHY_0129214 CHY_0129 "putative transaldola 0.138 0.285 0.424 0.00079
TAIR|locus:2181665 TRA2 "transaldolase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1675 (594.7 bits), Expect = 2.4e-172, P = 2.4e-172
 Identities = 336/440 (76%), Positives = 363/440 (82%)

Query:     1 MATISKLTN-PAVXXXXXXXXXXXXXXXXXXXXXQTKTGFNSKVASSQLTLRNNHPLKAS 59
             MATIS L N P                       +     N+K++SSQL+LR N     S
Sbjct:     1 MATISNLANLPRATCVDSKSSSSSSVLPRSFVNFRA---LNAKLSSSQLSLRYNQRSIPS 57

Query:    60 LVVKCSQSGGNGSSAKRTTLHDLYEQEGQSPWYDNLCRPVTDLLPLIASGVRGVTSNPAI 119
             L V+CS SGGNG++ KRTTLHDLYE+EGQSPWYDNLCRPVTDLLPLIA GVRGVTSNPAI
Sbjct:    58 LSVRCSVSGGNGTAGKRTTLHDLYEKEGQSPWYDNLCRPVTDLLPLIARGVRGVTSNPAI 117

Query:   120 FQKAISSSNAYNDQFRELVQSGKDIEAAYWELVIKDIQDACKLFESIYDETNGGDGYVSV 179
             FQKAIS+SNAYNDQFR LV+SGKDIE+AYWELV+KDIQDACKLFE IYD+T G DGYVSV
Sbjct:   118 FQKAISTSNAYNDQFRTLVESGKDIESAYWELVVKDIQDACKLFEPIYDQTEGADGYVSV 177

Query:   180 EVSPRLADDTQGTVEAAKWLHKVVNRPNVYIKIPATAPCVPSIKEVISQGISVNVTLIFS 239
             EVSPRLADDTQGTVEAAK+L KVVNR NVYIKIPATAPC+PSI++VI+ GISVNVTLIFS
Sbjct:   178 EVSPRLADDTQGTVEAAKYLSKVVNRRNVYIKIPATAPCIPSIRDVIAAGISVNVTLIFS 237

Query:   240 LARYEEVIDAYLDGLEASGLSDLSRVTSVASFFVSRVDTLIDKMLEKIGTPEALDLRGXX 299
             +ARYE VIDAYLDGLEASGL DLSRVTSVASFFVSRVDTL+DKMLE+IGTPEALDLRG  
Sbjct:   238 IARYEAVIDAYLDGLEASGLDDLSRVTSVASFFVSRVDTLMDKMLEQIGTPEALDLRGKA 297

Query:   300 XXXXXXXXXXXXXXXFSGPRWDALVKKGAKKQRLLWASTSVKNPAYPDTLYVAPLIGPDT 359
                            FSGPRW+ALVKKGAKKQRLLWASTSVKNPAY DTLYVAPLIGPDT
Sbjct:   298 AVAQAALAYKLYQQKFSGPRWEALVKKGAKKQRLLWASTSVKNPAYSDTLYVAPLIGPDT 357

Query:   360 VSTMPDQALQAFVDHGAVSRTIDLNVSEAEGIYSALEKLGIDWNYVGTQLELEGVDSFKK 419
             VSTMPDQAL+AF DHG V RTID NVSEAEGIYSALEKLGIDWN VG QLE EGVDSFKK
Sbjct:   358 VSTMPDQALEAFADHGIVKRTIDANVSEAEGIYSALEKLGIDWNKVGEQLEDEGVDSFKK 417

Query:   420 SFDSLLDTLQEKANSLKLVS 439
             SF+SLL TLQ+KAN+LKL S
Sbjct:   418 SFESLLGTLQDKANTLKLAS 437
GO:0003824 "catalytic activity" evidence=IEA
GO:0004801 "sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity" evidence=IEA;ISS
GO:0005737 "cytoplasm" evidence=IEA
GO:0009507 "chloroplast" evidence=ISM;IDA
GO:0005739 "mitochondrion" evidence=IDA
GO:0009570 "chloroplast stroma" evidence=IDA
GO:0046686 "response to cadmium ion" evidence=IEP;RCA
GO:0005829 "cytosol" evidence=RCA
GO:0006096 "glycolysis" evidence=RCA
GO:0009060 "aerobic respiration" evidence=RCA
GO:0009536 "plastid" evidence=IDA
GO:0009809 "lignin biosynthetic process" evidence=IMP
GO:0033587 "shikimate biosynthetic process" evidence=IMP
UNIPROTKB|O06812 tal "Transaldolase" [Mycobacterium tuberculosis (taxid:1773)] Back     alignment and assigned GO terms
TIGR_CMR|CJE_0329 CJE_0329 "transaldolase" [Campylobacter jejuni RM1221 (taxid:195099)] Back     alignment and assigned GO terms
POMBASE|SPCC1020.06c tal1 "transaldolase (predicted)" [Schizosaccharomyces pombe (taxid:4896)] Back     alignment and assigned GO terms
UNIPROTKB|Q3AFT3 tal "Probable transaldolase" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)] Back     alignment and assigned GO terms
TIGR_CMR|CHY_0129 CHY_0129 "putative transaldolase" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
A8KYS5TAL_FRASN2, ., 2, ., 1, ., 20.51120.78860.9403yesno
Q2JCG8TAL_FRASC2, ., 2, ., 1, ., 20.50280.7750.9191yesno
A9WT40TAL_RENSM2, ., 2, ., 1, ., 20.51680.78860.9278yesno
A0LTY8TAL_ACIC12, ., 2, ., 1, ., 20.51010.76590.9059yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
4th Layer2.2.1.20.914
3rd Layer2.2.10.921

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query440
PRK03343368 PRK03343, PRK03343, transaldolase; Validated 0.0
cd00955338 cd00955, Transaldolase_like, Transaldolase-like pr 0.0
PRK09533 948 PRK09533, PRK09533, bifunctional transaldolase/pho 1e-147
cd00439252 cd00439, Transaldolase, Transaldolase 1e-100
TIGR00876350 TIGR00876, tal_mycobact, transaldolase, mycobacter 5e-93
pfam00923244 pfam00923, Transaldolase, Transaldolase 1e-71
PRK03903274 PRK03903, PRK03903, transaldolase; Provisional 7e-55
COG0176239 COG0176, MipB, Transaldolase [Carbohydrate transpo 9e-42
cd00956211 cd00956, Transaldolase_FSA, Transaldolase-like fru 4e-13
PRK01362214 PRK01362, PRK01362, putative translaldolase; Provi 2e-11
PTZ00411333 PTZ00411, PTZ00411, transaldolase-like protein; Pr 8e-09
cd00957313 cd00957, Transaldolase_TalAB, Transaldolases inclu 8e-09
PRK12376236 PRK12376, PRK12376, putative translaldolase; Provi 3e-08
TIGR00875213 TIGR00875, fsa_talC_mipB, fructose-6-phosphate ald 3e-08
PRK05269318 PRK05269, PRK05269, transaldolase B; Provisional 7e-08
TIGR00874317 TIGR00874, talAB, transaldolase 1e-07
PRK12655220 PRK12655, PRK12655, fructose-6-phosphate aldolase; 3e-06
TIGR02134236 TIGR02134, transald_staph, transaldolase 6e-06
PRK12309391 PRK12309, PRK12309, transaldolase/EF-hand domain-c 4e-04
PRK12346316 PRK12346, PRK12346, transaldolase A; Provisional 0.001
>gnl|CDD|235117 PRK03343, PRK03343, transaldolase; Validated Back     alignment and domain information 
 Score =  541 bits (1397), Expect = 0.0
 Identities = 199/368 (54%), Positives = 250/368 (67%), Gaps = 15/368 (4%)

Query: 79  LHDLYEQEGQSPWYDNLCRPVTDLLP------LIAS-GVRGVTSNPAIFQKAISSSNAYN 131
           L  L    GQS W D+L R   D L       LI   GV GVTSNPAIFQKAI+  +AY+
Sbjct: 5   LQALSAL-GQSIWLDDLSR---DRLTSGNLARLIDEKGVVGVTSNPAIFQKAIAGGDAYD 60

Query: 132 DQFRELVQSGKDIEAAYWELVIKDIQDACKLFESIYDETNGGDGYVSVEVSPRLADDTQG 191
            Q  EL  +G D+E AY EL   D+++AC +   +Y+ T G DG VS+EVSPRLA DT+ 
Sbjct: 61  AQIAELAAAGADVEEAYEELTTADVRNACDVLRPVYEATGGVDGRVSIEVSPRLAHDTEA 120

Query: 192 TVEAAKWLHKVVNRPNVYIKIPATAPCVPSIKEVISQGISVNVTLIFSLARYEEVIDAYL 251
           T+  A+ L   V+RPN+ IKIPAT   +P+I+ +I++GISVNVTLIFS+ RY  V DAYL
Sbjct: 121 TIAEARRLWAAVDRPNLMIKIPATPEGLPAIEALIAEGISVNVTLIFSVERYRAVADAYL 180

Query: 252 DGLE---ASGLSDLSRVTSVASFFVSRVDTLIDKMLEKIGTPEALDLRGKAAVAQAALAY 308
            GLE   A+G  DLS++ SVASFFVSRVDT +DK LE IGT EAL LRGKAA+A A LAY
Sbjct: 181 RGLEKRLAAGH-DLSKIHSVASFFVSRVDTEVDKRLEAIGTDEALALRGKAAIANARLAY 239

Query: 309 QLYQKKFSGPRWDALVKKGAKKQRLLWASTSVKNPAYPDTLYVAPLIGPDTVSTMPDQAL 368
           Q Y++ F+ PRW AL   GA+ QR LWAST  KNPAY DTLYV  L+ PDTV+TMP+  L
Sbjct: 240 QAYEEVFASPRWAALAAAGARPQRPLWASTGTKNPAYSDTLYVDELVAPDTVNTMPEATL 299

Query: 369 QAFVDHGAVSRTIDLNVSEAEGIYSALEKLGIDWNYVGTQLELEGVDSFKKSFDSLLDTL 428
            AF DHG V+ T+  +  EA+ + +AL  LGID + V   LE EGVD F+ S++ LL +L
Sbjct: 300 DAFADHGEVADTLTGDYEEAQAVLAALAALGIDLDDVTAVLEEEGVDKFEASWNELLASL 359

Query: 429 QEKANSLK 436
           + K ++L 
Sbjct: 360 EAKLDALA 367

Length = 368
>gnl|CDD|188642 cd00955, Transaldolase_like, Transaldolase-like proteins from plants and bacteria Back     alignment and domain information
>gnl|CDD|236551 PRK09533, PRK09533, bifunctional transaldolase/phosoglucose isomerase; Validated Back     alignment and domain information
>gnl|CDD|188631 cd00439, Transaldolase, Transaldolase Back     alignment and domain information
>gnl|CDD|129954 TIGR00876, tal_mycobact, transaldolase, mycobacterial type Back     alignment and domain information
>gnl|CDD|216195 pfam00923, Transaldolase, Transaldolase Back     alignment and domain information
>gnl|CDD|235171 PRK03903, PRK03903, transaldolase; Provisional Back     alignment and domain information
>gnl|CDD|223254 COG0176, MipB, Transaldolase [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|188643 cd00956, Transaldolase_FSA, Transaldolase-like fructose-6-phosphate aldolases (FSA) found in bacteria and archaea Back     alignment and domain information
>gnl|CDD|234947 PRK01362, PRK01362, putative translaldolase; Provisional Back     alignment and domain information
>gnl|CDD|240406 PTZ00411, PTZ00411, transaldolase-like protein; Provisional Back     alignment and domain information
>gnl|CDD|188644 cd00957, Transaldolase_TalAB, Transaldolases including both TalA and TalB Back     alignment and domain information
>gnl|CDD|183481 PRK12376, PRK12376, putative translaldolase; Provisional Back     alignment and domain information
>gnl|CDD|129953 TIGR00875, fsa_talC_mipB, fructose-6-phosphate aldolase, TalC/MipB family Back     alignment and domain information
>gnl|CDD|235381 PRK05269, PRK05269, transaldolase B; Provisional Back     alignment and domain information
>gnl|CDD|162081 TIGR00874, talAB, transaldolase Back     alignment and domain information
>gnl|CDD|183655 PRK12655, PRK12655, fructose-6-phosphate aldolase; Reviewed Back     alignment and domain information
>gnl|CDD|131189 TIGR02134, transald_staph, transaldolase Back     alignment and domain information
>gnl|CDD|183426 PRK12309, PRK12309, transaldolase/EF-hand domain-containing protein; Provisional Back     alignment and domain information
>gnl|CDD|183458 PRK12346, PRK12346, transaldolase A; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 440
PRK03343368 transaldolase; Validated 100.0
TIGR00876350 tal_mycobact transaldolase, mycobacterial type. Th 100.0
PRK09533 948 bifunctional transaldolase/phosoglucose isomerase; 100.0
cd00955338 Transaldolase_like Transaldolase-like proteins fro 100.0
PRK03903274 transaldolase; Provisional 100.0
KOG2772337 consensus Transaldolase [Carbohydrate transport an 100.0
PRK05269318 transaldolase B; Provisional 100.0
PRK12346316 transaldolase A; Provisional 100.0
PF00923287 Transaldolase: Transaldolase; InterPro: IPR001585 100.0
TIGR00874317 talAB transaldolase. This family includes the majo 100.0
cd00957313 Transaldolase_TalAB Transaldolases including both 100.0
PRK12309391 transaldolase/EF-hand domain-containing protein; P 100.0
PTZ00411333 transaldolase-like protein; Provisional 100.0
cd00439252 Transaldolase Transaldolase. Enzymes found in the 100.0
COG0176239 MipB Transaldolase [Carbohydrate transport and met 100.0
TIGR00875213 fsa_talC_mipB fructose-6-phosphate aldolase, TalC/ 100.0
PRK12655220 fructose-6-phosphate aldolase; Reviewed 100.0
PRK01362214 putative translaldolase; Provisional 100.0
PRK12656222 fructose-6-phosphate aldolase; Reviewed 100.0
PRK12653220 fructose-6-phosphate aldolase; Reviewed 100.0
PRK12376236 putative translaldolase; Provisional 100.0
TIGR02134236 transald_staph transaldolase. This small family of 100.0
cd00956211 Transaldolase_FSA Transaldolase-like fructose-6-ph 100.0
KOG2772337 consensus Transaldolase [Carbohydrate transport an 93.3
TIGR01182204 eda Entner-Doudoroff aldolase. 2-deydro-3-deoxypho 86.37
COG5016472 Pyruvate/oxaloacetate carboxyltransferase [Energy 84.28
PRK06015201 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphog 81.42
>PRK03343 transaldolase; Validated Back     alignment and domain information 
Probab=100.00  E-value=5e-96  Score=744.91  Aligned_cols=360  Identities=54%  Similarity=0.841  Sum_probs=345.0

Q ss_pred             cCcHHHHHhhcCcccccccccccc---ccHHHHHh-CCCCccccChHHHHHHHhCCcchHHHHHHHHHcCCChHHHHHHH
Q 036665           76 RTTLHDLYEQEGQSPWYDNLCRPV---TDLLPLIA-SGVRGVTSNPAIFQKAISSSNAYNDQFRELVQSGKDIEAAYWEL  151 (440)
Q Consensus        76 ~~~l~~l~~~~gqs~W~D~i~R~~---~el~~li~-~Gv~GvTTNPsI~~kAi~~~~~Y~~~i~~l~~~g~~~~e~y~~L  151 (440)
                      .|+|++|+ ++|||+|||+|+|++   ++|+++|+ .|++|+||||+||.+|+.+++.|+++|++++..|++.+++||+|
T Consensus         2 ~~~l~~l~-~~g~s~WlD~i~R~~l~~g~l~~lI~~~g~~GaTsNPsIf~~Ai~~~~~Y~~~i~~l~~~~~~~~~~~~~L   80 (368)
T PRK03343          2 MNPLQALS-ALGQSIWLDDLSRDRLTSGNLARLIDEKGVVGVTSNPAIFQKAIAGGDAYDAQIAELAAAGADVEEAYEEL   80 (368)
T ss_pred             CcHHHHHH-HcCcEEeecCCccccccCcCHHHHHHhCCCCeeccCHHHHHHHHhCCHHHHHHHHHHHHhcCChhHHHHHH
Confidence            37899997 699999999999998   58999997 68999999999999999889999999999999999999999999


Q ss_pred             HHHHHHHHHHHhHHhhhhcCCCCccEEEEecCCCCCCHHHHHHHHHHHHhhcCCCcEEEEcCCCcchHHHHHHHHHCCCc
Q 036665          152 VIKDIQDACKLFESIYDETNGGDGYVSVEVSPRLADDTQGTVEAAKWLHKVVNRPNVYIKIPATAPCVPSIKEVISQGIS  231 (440)
Q Consensus       152 ~i~di~~a~d~l~p~~~~~~g~~G~VS~EVdP~la~D~e~~v~eA~~L~~~v~r~nv~IKIPaT~eGi~Ai~~L~~~GI~  231 (440)
                      +++||+.|||+|+|+|+.++|.+|+||+||||++++|+++||++|++|++++++||+|||||+||+|++||++|+++||+
T Consensus        81 a~~di~~AaD~L~p~~e~~~g~~G~VS~EVdp~la~d~e~~i~eA~~L~~~~~~~nv~IKIPaT~~Gi~Ai~~L~~~GI~  160 (368)
T PRK03343         81 TTADVRNACDVLRPVYEATGGVDGRVSIEVSPRLAHDTEATIAEARRLWAAVDRPNLMIKIPATPEGLPAIEALIAEGIS  160 (368)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCCCeEEEEeccccccCHHHHHHHHHHHHHhcCCCCEEEEeCCCHHHHHHHHHHHHCCCc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eEEeecCCHHHHHHHHHHHHHHHHHc--CCCCCCccceEEeechhhhhHHHhhhhhhcCCccccccchHHHHHHHHHHHH
Q 036665          232 VNVTLIFSLARYEEVIDAYLDGLEAS--GLSDLSRVTSVASFFVSRVDTLIDKMLEKIGTPEALDLRGKAAVAQAALAYQ  309 (440)
Q Consensus       232 vN~TlIFS~~Qa~a~aqA~lagl~~a--G~~~~~~vasviSpfVgRiD~~~d~~l~~~g~~~a~~~~G~~~Ia~a~~~y~  309 (440)
                      ||+|+|||++||.+|++||++|++++  .|.|++++.+||||||||+|+++|+.+++.+.+.+.++.|..+|++++++|+
T Consensus       161 vn~TliFS~~Qa~a~~eA~~~Gl~~~~~~G~~~~~~~sviS~FVsRiD~~~d~~l~~~~~~~~~~l~g~~gVa~ak~~Y~  240 (368)
T PRK03343        161 VNVTLIFSVERYRAVADAYLRGLEKRLAAGHDLSKIHSVASFFVSRVDTEVDKRLEAIGTDEALALRGKAAIANARLAYQ  240 (368)
T ss_pred             eeEeeecCHHHHHHHHHHHHHHHHHHHHcCCCcccCCeEEEeehhhhHhhhhhhhhhcCcchhhhhcCCHHHHHHHHHHH
Confidence            99999999999999999999999863  1489999999999999999999999999877665556789999999999999


Q ss_pred             HHHhccCCcchHHHHhcCCccceeeeeeccccCCCCCchhhhhhhcCCCeeccCcHHHHHHHHhCCccccccccchhHHh
Q 036665          310 LYQKKFSGPRWDALVKKGAKKQRLLWASTSVKNPAYPDTLYVAPLIGPDTVSTMPDQALQAFVDHGAVSRTIDLNVSEAE  389 (440)
Q Consensus       310 ~y~~~f~~~~w~~l~~~G~~~qrlL~ASTsvKn~~~~~~~~v~~L~G~d~v~TiP~~~l~al~~~~~~~~~l~~~~~~a~  389 (440)
                      +|+++|+|+||+.|+++|+++||+||||||||||+|++++||.+|+|||+||||||++|++|.+|+.+.++++...++++
T Consensus       241 ~~~~~~~~~~~~~l~~~ga~~qr~LwAsT~vk~~~~~~~~yV~~L~G~dtvnT~p~~tl~a~~~~g~~~~~l~~~~~~a~  320 (368)
T PRK03343        241 AYEEVFASPRWAALAAAGARPQRPLWASTGTKNPAYSDTLYVDELVAPDTVNTMPEATLDAFADHGEVADTLTGDYEEAQ  320 (368)
T ss_pred             HHHHhcCcchhHHHHhcCCcccccceeccccCCCccCccccHHHccCCCccCCCCHHHHHHHHhcCCccccCCCchhhHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999998888998888888


Q ss_pred             hHHhHhHhhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 036665          390 GIYSALEKLGIDWNYVGTQLELEGVDSFKKSFDSLLDTLQEKANSLK  436 (440)
Q Consensus       390 ~~~~~l~~~~id~~~~~~~L~~eGi~~F~~~~~~Ll~~l~~k~~~l~  436 (440)
                      .+++.++..|+|++.++++|++|||++|+++|++|++.|++|+++++
T Consensus       321 ~~l~~l~~~gid~d~~~~~ll~eGi~~F~~~~~~Ll~~l~~k~~~~~  367 (368)
T PRK03343        321 AVLAALAALGIDLDDVTAVLEEEGVDKFEASWNELLASLEAKLDALA  367 (368)
T ss_pred             HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            99999999999999999999999999999999999999999998765

>TIGR00876 tal_mycobact transaldolase, mycobacterial type Back     alignment and domain information
>PRK09533 bifunctional transaldolase/phosoglucose isomerase; Validated Back     alignment and domain information
>cd00955 Transaldolase_like Transaldolase-like proteins from plants and bacteria Back     alignment and domain information
>PRK03903 transaldolase; Provisional Back     alignment and domain information
>KOG2772 consensus Transaldolase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK05269 transaldolase B; Provisional Back     alignment and domain information
>PRK12346 transaldolase A; Provisional Back     alignment and domain information
>PF00923 Transaldolase: Transaldolase; InterPro: IPR001585 Transaldolase (2 Back     alignment and domain information
>TIGR00874 talAB transaldolase Back     alignment and domain information
>cd00957 Transaldolase_TalAB Transaldolases including both TalA and TalB Back     alignment and domain information
>PRK12309 transaldolase/EF-hand domain-containing protein; Provisional Back     alignment and domain information
>PTZ00411 transaldolase-like protein; Provisional Back     alignment and domain information
>cd00439 Transaldolase Transaldolase Back     alignment and domain information
>COG0176 MipB Transaldolase [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR00875 fsa_talC_mipB fructose-6-phosphate aldolase, TalC/MipB family Back     alignment and domain information
>PRK12655 fructose-6-phosphate aldolase; Reviewed Back     alignment and domain information
>PRK01362 putative translaldolase; Provisional Back     alignment and domain information
>PRK12656 fructose-6-phosphate aldolase; Reviewed Back     alignment and domain information
>PRK12653 fructose-6-phosphate aldolase; Reviewed Back     alignment and domain information
>PRK12376 putative translaldolase; Provisional Back     alignment and domain information
>TIGR02134 transald_staph transaldolase Back     alignment and domain information
>cd00956 Transaldolase_FSA Transaldolase-like fructose-6-phosphate aldolases (FSA) found in bacteria and archaea, which are member of the MipB/TalC subfamily of class I aldolases Back     alignment and domain information
>KOG2772 consensus Transaldolase [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR01182 eda Entner-Doudoroff aldolase Back     alignment and domain information
>COG5016 Pyruvate/oxaloacetate carboxyltransferase [Energy production and conversion] Back     alignment and domain information
>PRK06015 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query440
3r5e_A360 Transaldolase From Corynebacterium Glutamicum Lengt 5e-76
3clm_A352 Crystal Structure Of Transaldolase (Yp_208650.1) Fr 5e-65
3m16_A329 Structure Of A Transaldolase From Oleispira Antarct 1e-05
3r8r_A212 Transaldolase From Bacillus Subtilis Length = 212 1e-04
1i2p_A316 Crystal Structure Of Escherichia Coli Transaldolase 2e-04
1i2n_A316 Crystal Structure Of Escherichia Coli Transaldolase 2e-04
1i2r_A316 Crystal Structure Of Escherichia Coli Transaldolase 2e-04
1onr_A316 Structure Of Transaldolase B Length = 316 2e-04
3kof_A337 Crystal Structure Of The Double Mutant F178yR181E O 2e-04
3cwn_A337 Escherichia Coli Transaldolase B Mutant F178y Lengt 2e-04
3s0c_A223 Transaldolase Wt Of Thermoplasma Acidophilum Length 5e-04
1wx0_A223 Crystal Structure Of Transaldolase From Thermus The 5e-04
3hjz_A334 The Structure Of An Aldolase From Prochlorococcus M 6e-04
1i2q_A316 Crystal Structure Of Escherichia Coli Transaldolase 9e-04
>pdb|3R5E|A Chain A, Transaldolase From Corynebacterium Glutamicum Length = 360 Back     alignment and structure 
Iteration: 1

 Score =  281 bits (719), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 159/354 (44%), Positives = 224/354 (63%), Gaps = 11/354 (3%)
Query: 85  QEGQSPWYDNLCRP-VT--DLLPLIAS-GVRGVTSNPAIFQKAISSSNAYNDQFRELVQS 140
           Q G S W D+L R  +T  +L  +I    V GVT+NPAIF  A+S  ++Y+ Q  EL  +
Sbjct: 9   QLGTSTWLDDLSRERITSGNLSQVIEEKSVVGVTTNPAIFAAAMSKGDSYDAQIAELKAA 68
Query: 141 GKDIEAAYWELVIKDIQDACKLFESIYDETNGGDGYVSVEVSPRLADDTQGTVEAAKWLH 200
           G  ++ A + + I D+++AC LF  I++ +NG DG VS+EV PR++ D   T+  AK L 
Sbjct: 69  GASVDQAVYAMSIDDVRNACDLFTGIFESSNGYDGRVSIEVDPRISADRDATLAQAKELW 128
Query: 201 KVVNRPNVYIKIPATAPCVPSIKEVISQGISVNVTLIFSLARYEEVIDAYLDGLE--ASG 258
             V+RPNV IKIPAT   +P+I + +++GISVNVTLIFS+ARY EVI A+++G++  A+ 
Sbjct: 129 AKVDRPNVMIKIPATPGSLPAITDALAEGISVNVTLIFSVARYREVIAAFIEGIKQAAAN 188
Query: 259 LSDLSRVTSVASFFVSRVDTLIDKMLEKIGTPEALDLRGXXXXXXXXXXXXXXXXXFSGP 318
             D+S++ SVASFFVSRVD  IDK LE IG+ EAL LRG                 F   
Sbjct: 189 GHDVSKIHSVASFFVSRVDVEIDKRLEAIGSDEALALRGKAGVANAQRAYAVYKELFDA- 247
Query: 319 RWDALVKKGAKKQRLLWASTSVKNPAYPDTLYVAPLIGPDTVSTMPDQALQAFVDHGAV- 377
              A + +GA  QR LWAST VKNPAY  TLYV+ L GP+TV+TMP+  + A ++ G + 
Sbjct: 248 ---AELPEGANTQRPLWASTGVKNPAYAATLYVSELAGPNTVNTMPEGTIDAVLEQGNLH 304
Query: 378 SRTIDLNVSEAEGIYSALEKLGIDWNYVGTQLELEGVDSFKKSFDSLLDTLQEK 431
             T+  + +EA+ ++S LE LG+D   V   LE EGVD F  S+  LL++++ +
Sbjct: 305 GDTLSNSAAEADAVFSQLEALGVDLADVFQVLETEGVDKFVASWSELLESMEAR 358
>pdb|3CLM|A Chain A, Crystal Structure Of Transaldolase (Yp_208650.1) From Neisseria Gonorrhoeae Fa 1090 At 1.14 A Resolution Length = 352 Back     alignment and structure
>pdb|3M16|A Chain A, Structure Of A Transaldolase From Oleispira Antarctica Length = 329 Back     alignment and structure
>pdb|3R8R|A Chain A, Transaldolase From Bacillus Subtilis Length = 212 Back     alignment and structure
>pdb|1I2P|A Chain A, Crystal Structure Of Escherichia Coli Transaldolase B Mutant D17a Length = 316 Back     alignment and structure
>pdb|1I2N|A Chain A, Crystal Structure Of Escherichia Coli Transaldolase B Mutant N35a Length = 316 Back     alignment and structure
>pdb|1I2R|A Chain A, Crystal Structure Of Escherichia Coli Transaldolase B Mutant S176a Length = 316 Back     alignment and structure
>pdb|1ONR|A Chain A, Structure Of Transaldolase B Length = 316 Back     alignment and structure
>pdb|3KOF|A Chain A, Crystal Structure Of The Double Mutant F178yR181E OF E.COLI Transaldolase B Length = 337 Back     alignment and structure
>pdb|3CWN|A Chain A, Escherichia Coli Transaldolase B Mutant F178y Length = 337 Back     alignment and structure
>pdb|3S0C|A Chain A, Transaldolase Wt Of Thermoplasma Acidophilum Length = 223 Back     alignment and structure
>pdb|1WX0|A Chain A, Crystal Structure Of Transaldolase From Thermus Thermophilus Hb8 Length = 223 Back     alignment and structure
>pdb|3HJZ|A Chain A, The Structure Of An Aldolase From Prochlorococcus Marinus Length = 334 Back     alignment and structure
>pdb|1I2Q|A Chain A, Crystal Structure Of Escherichia Coli Transaldolase B Mutant T156a Length = 316 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query440
3r5e_A360 Transaldolase; pentose phosphate pathway, TIM barr 1e-153
3clm_A352 Transaldolase; YP_208650.1, structural genomics, j 1e-148
3s1x_A223 Probable transaldolase; alpha-beta barrel, conform 1e-15
1vpx_A230 Protein (transaldolase (EC 2.2.1.2)); TM0295, stru 2e-15
3m16_A329 Transaldolase; dimer, molecular replac swiss-model 9e-15
3cwn_A337 Transaldolase B; directed evolution, cytoplasm, pe 1e-14
3r8r_A212 Transaldolase; pentose phosphate pathway, schiff b 5e-14
1l6w_A220 Fructose-6-phosphate aldolase 1; alpha-beta barrel 8e-14
3tkf_A345 Transaldolase; structural genomics, center for str 1e-13
1wx0_A223 Transaldolase; structural genomics, riken structur 3e-13
2e1d_A331 Transaldolase; pentose phosphate pathway, structur 5e-13
3cq0_A339 Putative transaldolase YGR043C; alpha/beta barrel, 4e-12
3hjz_A334 Transaldolase B; parachlorococcus, marine, cyanoba 4e-12
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-04
>3r5e_A Transaldolase; pentose phosphate pathway, TIM barrel fold, transferase; 2.10A {Corynebacterium glutamicum} Length = 360 Back     alignment and structure
 Score =  437 bits (1126), Expect = e-153
 Identities = 167/362 (46%), Positives = 235/362 (64%), Gaps = 12/362 (3%)

Query: 77  TTLHDLYEQEGQSPWYDNLCRPVT---DLLPLIAS-GVRGVTSNPAIFQKAISSSNAYND 132
           + + DL  Q G S W D+L R      +L  +I    V GVT+NPAIF  A+S  ++Y+ 
Sbjct: 2   SHIDDL-AQLGTSTWLDDLSRERITSGNLSQVIEEKSVVGVTTNPAIFAAAMSKGDSYDA 60

Query: 133 QFRELVQSGKDIEAAYWELVIKDIQDACKLFESIYDETNGGDGYVSVEVSPRLADDTQGT 192
           Q  EL  +G  ++ A + + I D+++AC LF  I++ +NG DG VS+EV PR++ D   T
Sbjct: 61  QIAELKAAGASVDQAVYAMSIDDVRNACDLFTGIFESSNGYDGRVSIEVDPRISADRDAT 120

Query: 193 VEAAKWLHKVVNRPNVYIKIPATAPCVPSIKEVISQGISVNVTLIFSLARYEEVIDAYLD 252
           +  AK L   V+RPNV IKIPAT   +P+I + +++GISVNVTLIFS+ARY EVI A+++
Sbjct: 121 LAQAKELWAKVDRPNVMIKIPATPGSLPAITDALAEGISVNVTLIFSVARYREVIAAFIE 180

Query: 253 GLE--ASGLSDLSRVTSVASFFVSRVDTLIDKMLEKIGTPEALDLRGKAAVAQAALAYQL 310
           G++  A+   D+S++ SVASFFVSRVD  IDK LE IG+ EAL LRGKA VA A  AY +
Sbjct: 181 GIKQAAANGHDVSKIHSVASFFVSRVDVEIDKRLEAIGSDEALALRGKAGVANAQRAYAV 240

Query: 311 YQKKFSGPRWDALVKKGAKKQRLLWASTSVKNPAYPDTLYVAPLIGPDTVSTMPDQALQA 370
           Y++ F          +GA  QR LWAST VKNPAY  TLYV+ L GP+TV+TMP+  + A
Sbjct: 241 YKELFDAAEL----PEGANTQRPLWASTGVKNPAYAATLYVSELAGPNTVNTMPEGTIDA 296

Query: 371 FVDHGAVS-RTIDLNVSEAEGIYSALEKLGIDWNYVGTQLELEGVDSFKKSFDSLLDTLQ 429
            ++ G +   T+  + +EA+ ++S LE LG+D   V   LE EGVD F  S+  LL++++
Sbjct: 297 VLEQGNLHGDTLSNSAAEADAVFSQLEALGVDLADVFQVLETEGVDKFVASWSELLESME 356

Query: 430 EK 431
            +
Sbjct: 357 AR 358
>3clm_A Transaldolase; YP_208650.1, structural genomics, joint cente structural genomics, JCSG, protein structure initiative, PS transferase; HET: MSE; 1.14A {Neisseria gonorrhoeae} Length = 352 Back     alignment and structure
>3s1x_A Probable transaldolase; alpha-beta barrel, conformational selection, domain swapping transferase; HET: I22; 1.65A {Thermoplasma acidophilum} PDB: 3s1u_A* 3s1v_A* 3s0c_A* 3s1w_A* Length = 223 Back     alignment and structure
>1vpx_A Protein (transaldolase (EC 2.2.1.2)); TM0295, structural genomics, JOI for structural genomics, JCSG; HET: GOL; 2.40A {Thermotoga maritima} SCOP: c.1.10.1 Length = 230 Back     alignment and structure
>3m16_A Transaldolase; dimer, molecular replac swiss-model, structural genomics, PSI-2, protein structure initiative; 2.79A {Oleispira antarctica} Length = 329 Back     alignment and structure
>3cwn_A Transaldolase B; directed evolution, cytoplasm, pentose shunt, transferase; 1.40A {Escherichia coli} PDB: 3kof_A 1ucw_A* 1onr_A 1i2r_A 1i2q_A 1i2o_A 1i2p_A 1i2n_A Length = 337 Back     alignment and structure
>3r8r_A Transaldolase; pentose phosphate pathway, schiff bases; 1.90A {Bacillus subtilis} Length = 212 Back     alignment and structure
>1l6w_A Fructose-6-phosphate aldolase 1; alpha-beta barrel, domain swapping, lyase; 1.93A {Escherichia coli} SCOP: c.1.10.1 Length = 220 Back     alignment and structure
>3tkf_A Transaldolase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel/TIM barrel; HET: I22 EPE; 1.50A {Francisella tularensis subsp} PDB: 3te9_A* 3upb_A* 3tk7_A* 3tno_A* 4e0c_A 3igx_A Length = 345 Back     alignment and structure
>1wx0_A Transaldolase; structural genomics, riken structural genomics/proteomics initiative, RSGI, transferas; 2.27A {Thermus thermophilus HB8} SCOP: c.1.10.1 Length = 223 Back     alignment and structure
>2e1d_A Transaldolase; pentose phosphate pathway, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.00A {Mus musculus} SCOP: c.1.10.1 PDB: 2cwn_A 1f05_A Length = 331 Back     alignment and structure
>3cq0_A Putative transaldolase YGR043C; alpha/beta barrel, pentose shunt, transferase; HET: PG4; 1.90A {Saccharomyces cerevisiae} Length = 339 Back     alignment and structure
>3hjz_A Transaldolase B; parachlorococcus, marine, cyanobacteria; HET: MSE; 1.90A {Prochlorococcus marinus str} Length = 334 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query440
3r5e_A360 Transaldolase; pentose phosphate pathway, TIM barr 100.0
3clm_A352 Transaldolase; YP_208650.1, structural genomics, j 100.0
3cq0_A339 Putative transaldolase YGR043C; alpha/beta barrel, 100.0
2e1d_A331 Transaldolase; pentose phosphate pathway, structur 100.0
3cwn_A337 Transaldolase B; directed evolution, cytoplasm, pe 100.0
3tkf_A345 Transaldolase; structural genomics, center for str 100.0
3m16_A329 Transaldolase; dimer, molecular replac swiss-model 100.0
3hjz_A334 Transaldolase B; parachlorococcus, marine, cyanoba 100.0
1vpx_A230 Protein (transaldolase (EC 2.2.1.2)); TM0295, stru 100.0
1wx0_A223 Transaldolase; structural genomics, riken structur 100.0
1l6w_A220 Fructose-6-phosphate aldolase 1; alpha-beta barrel 100.0
3r8r_A212 Transaldolase; pentose phosphate pathway, schiff b 100.0
3s1x_A223 Probable transaldolase; alpha-beta barrel, conform 100.0
>3r5e_A Transaldolase; pentose phosphate pathway, TIM barrel fold, transferase; 2.10A {Corynebacterium glutamicum} Back     alignment and structure
Probab=100.00  E-value=8.2e-94  Score=724.27  Aligned_cols=352  Identities=47%  Similarity=0.779  Sum_probs=338.3

Q ss_pred             CcHHHHHhhcCcccccccccccc---ccHHHHHh-CCCCccccChHHHHHHHhCCcchHHHHHHHHHcCCChHHHHHHHH
Q 036665           77 TTLHDLYEQEGQSPWYDNLCRPV---TDLLPLIA-SGVRGVTSNPAIFQKAISSSNAYNDQFRELVQSGKDIEAAYWELV  152 (440)
Q Consensus        77 ~~l~~l~~~~gqs~W~D~i~R~~---~el~~li~-~Gv~GvTTNPsI~~kAi~~~~~Y~~~i~~l~~~g~~~~e~y~~L~  152 (440)
                      |+|.+|. ++|||+|+|+|+|++   ++|+++|+ .|++|+||||+||.+|+.++|.|+++|++++.+|++.+++|+.|.
T Consensus         2 ~~l~~L~-~~g~siw~D~l~R~~l~sGdl~~~I~~~~~~gaTTNPsi~~kAi~~~~~Y~~~i~~~~~~~~~~~~~~~~L~   80 (360)
T 3r5e_A            2 SHIDDLA-QLGTSTWLDDLSRERITSGNLSQVIEEKSVVGVTTNPAIFAAAMSKGDSYDAQIAELKAAGASVDQAVYAMS   80 (360)
T ss_dssp             CHHHHHH-HTTEEEEESCCCHHHHHTSHHHHHHHHHCCCEEECCHHHHHHHHHHCSTTHHHHHHHHHTTCCHHHHHHHHH
T ss_pred             ChHHHHH-HcCcEEEeeCCcccccccccHHHHHHhCCCCeecCCHHHHHHHHhCCHHHHHHHHHHHHhcCChhhHHHHhH
Confidence            6799996 799999999999998   58998885 599999999999999997789999999999999999999999999


Q ss_pred             HHHHHHHHHHhHHhhhhcCCCCccEEEEecCCCCCCHHHHHHHHHHHHhhcCCCcEEEEcCCCcchHHHHHHHHHCCCce
Q 036665          153 IKDIQDACKLFESIYDETNGGDGYVSVEVSPRLADDTQGTVEAAKWLHKVVNRPNVYIKIPATAPCVPSIKEVISQGISV  232 (440)
Q Consensus       153 i~di~~a~d~l~p~~~~~~g~~G~VS~EVdP~la~D~e~~v~eA~~L~~~v~r~nv~IKIPaT~eGi~Ai~~L~~~GI~v  232 (440)
                      .+|++.+||+|+|+|+.+++++|+||+||||++++|+++||++|++|++++++||||||||+||+||+||++|+++||+|
T Consensus        81 ~~dv~~A~D~L~~~~e~~~~~~G~VS~EV~prla~d~e~mi~eA~~L~~li~~~nv~IKIP~T~eGl~A~~~L~~eGI~v  160 (360)
T 3r5e_A           81 IDDVRNACDLFTGIFESSNGYDGRVSIEVDPRISADRDATLAQAKELWAKVDRPNVMIKIPATPGSLPAITDALAEGISV  160 (360)
T ss_dssp             HHHHHHHHHHTHHHHHHTTTSSSEEEEECCGGGTTCHHHHHHHHHHHHHHHCCTTEEEEEESSTTHHHHHHHHHHTTCCE
T ss_pred             HHHHHHHHHHHHHHHHhcCCCCccEEEEecccccCCHHHHHHHHHHHHHhhCCCCeEEEeCCCHHHHHHHHHHHHcCCce
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEeecCCHHHHHHHHHHHHHHHHHc--CCCCCCccceEEeechhhhhHHHhhhhhhcCCccccccchHHHHHHHHHHHHH
Q 036665          233 NVTLIFSLARYEEVIDAYLDGLEAS--GLSDLSRVTSVASFFVSRVDTLIDKMLEKIGTPEALDLRGKAAVAQAALAYQL  310 (440)
Q Consensus       233 N~TlIFS~~Qa~a~aqA~lagl~~a--G~~~~~~vasviSpfVgRiD~~~d~~l~~~g~~~a~~~~G~~~Ia~a~~~y~~  310 (440)
                      |+|+|||++||++|+|||++|||++  .|+|++++++|+|+||||+|+++|++++++|++++.+++|+.+|+|++++|++
T Consensus       161 NvTliFS~~Qa~a~~~A~~~Gle~~~~~G~d~s~~~sV~S~FvsRiD~~~d~~l~~~g~~~~~~l~gk~giAnak~aY~~  240 (360)
T 3r5e_A          161 NVTLIFSVARYREVIAAFIEGIKQAAANGHDVSKIHSVASFFVSRVDVEIDKRLEAIGSDEALALRGKAGVANAQRAYAV  240 (360)
T ss_dssp             EEEEECSHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEEEEECHHHHHHHHHHHHHHCCHHHHHTTTCHHHHHHHHHHHH
T ss_pred             eeeeccCHHHHHHHHHHHHHHHHHHHhcCCCcccCceEEEEeHHHHHHHHHHHHhhcCCchhhHhCccHHHHHHHHHHHH
Confidence            9999999999999999999999852  34999999999999999999999999999998888889999999999999999


Q ss_pred             HHhccCCcchHHHHhcCCccceeeeeeccccCCCCCchhhhhhhcCCCeeccCcHHHHHHHHhCCccc-cccccchhHHh
Q 036665          311 YQKKFSGPRWDALVKKGAKKQRLLWASTSVKNPAYPDTLYVAPLIGPDTVSTMPDQALQAFVDHGAVS-RTIDLNVSEAE  389 (440)
Q Consensus       311 y~~~f~~~~w~~l~~~G~~~qrlL~ASTsvKn~~~~~~~~v~~L~G~d~v~TiP~~~l~al~~~~~~~-~~l~~~~~~a~  389 (440)
                      |++.|+|   +.|++ |+++||+||||||+|||+|++++||.+|+|||+|||||++|+++|.+||.+. .++....++++
T Consensus       241 ~~~~~~~---~~L~~-Ga~~qR~LwASTgvK~p~y~d~~YV~~Lig~~tVnT~P~~tl~A~~dhg~~~~~tl~~~~~~a~  316 (360)
T 3r5e_A          241 YKELFDA---AELPE-GANTQRPLWASTGVKNPAYAATLYVSELAGPNTVNTMPEGTIDAVLEQGNLHGDTLSNSAAEAD  316 (360)
T ss_dssp             HHHHHHH---CCCCT-TCCCCEEEEECCSCCSTTSCTTHHHHTTCCTTEEEEECHHHHHHHHHHCCCCSCCSTTCHHHHH
T ss_pred             HHHHhcc---chhhC-CCccceeeeeccccCCCcCCCcccHHHhcCCCcccCCCHHHHHHHHhcCCcccCCCCCCHHHHH
Confidence            9999988   78888 9999999999999999999999999999999999999999999999999985 99999999999


Q ss_pred             hHHhHhHhhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 036665          390 GIYSALEKLGIDWNYVGTQLELEGVDSFKKSFDSLLDTLQEKAN  433 (440)
Q Consensus       390 ~~~~~l~~~~id~~~~~~~L~~eGi~~F~~~~~~Ll~~l~~k~~  433 (440)
                      ++++.|.+.|||++.++++|++|||++|.++|++|++.|++|++
T Consensus       317 ~~l~~l~~~gid~~~v~~~L~~eGv~~F~~~~~~Ll~~~~~k~~  360 (360)
T 3r5e_A          317 AVFSQLEALGVDLADVFQVLETEGVDKFVASWSELLESMEARLK  360 (360)
T ss_dssp             HHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence            99999999999999999999999999999999999999999874
>3clm_A Transaldolase; YP_208650.1, structural genomics, joint cente structural genomics, JCSG, protein structure initiative, PS transferase; HET: MSE; 1.14A {Neisseria gonorrhoeae} Back     alignment and structure
>3cq0_A Putative transaldolase YGR043C; alpha/beta barrel, pentose shunt, transferase; HET: PG4; 1.90A {Saccharomyces cerevisiae} Back     alignment and structure
>2e1d_A Transaldolase; pentose phosphate pathway, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.00A {Mus musculus} SCOP: c.1.10.1 PDB: 2cwn_A 1f05_A Back     alignment and structure
>3cwn_A Transaldolase B; directed evolution, cytoplasm, pentose shunt, transferase; 1.40A {Escherichia coli} PDB: 3kof_A 1ucw_A* 1onr_A 1i2r_A 1i2q_A 1i2o_A 1i2p_A 1i2n_A Back     alignment and structure
>3tkf_A Transaldolase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel/TIM barrel; HET: I22 EPE; 1.50A {Francisella tularensis subsp} PDB: 3te9_A* 3upb_A* 3tk7_A* 3tno_A* 4e0c_A 3igx_A Back     alignment and structure
>3m16_A Transaldolase; dimer, molecular replac swiss-model, structural genomics, PSI-2, protein structure initiative; 2.79A {Oleispira antarctica} SCOP: c.1.10.1 Back     alignment and structure
>3hjz_A Transaldolase B; parachlorococcus, marine, cyanobacteria; HET: MSE; 1.90A {Prochlorococcus marinus str} Back     alignment and structure
>1vpx_A Protein (transaldolase (EC 2.2.1.2)); TM0295, structural genomics, JOI for structural genomics, JCSG; HET: GOL; 2.40A {Thermotoga maritima} SCOP: c.1.10.1 Back     alignment and structure
>1wx0_A Transaldolase; structural genomics, riken structural genomics/proteomics initiative, RSGI, transferas; 2.27A {Thermus thermophilus HB8} SCOP: c.1.10.1 Back     alignment and structure
>1l6w_A Fructose-6-phosphate aldolase 1; alpha-beta barrel, domain swapping, lyase; 1.93A {Escherichia coli} SCOP: c.1.10.1 Back     alignment and structure
>3r8r_A Transaldolase; pentose phosphate pathway, schiff bases; 1.90A {Bacillus subtilis} Back     alignment and structure
>3s1x_A Probable transaldolase; alpha-beta barrel, conformational selection, domain swapping transferase; HET: I22; 1.65A {Thermoplasma acidophilum} PDB: 3s1u_A* 3s1v_A* 3s0c_A* 3s1w_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 440
d2e1da1319 c.1.10.1 (A:13-331) Transaldolase {Mouse (Mus musc 8e-43
d1onra_316 c.1.10.1 (A:) Transaldolase {Escherichia coli [Tax 6e-34
d1wx0a1211 c.1.10.1 (A:1-211) Decameric fructose-6-phosphate 9e-17
d1l6wa_220 c.1.10.1 (A:) Decameric fructose-6-phosphate aldol 3e-04
d1vpxa_218 c.1.10.1 (A:) Decameric fructose-6-phosphate aldol 0.004
>d2e1da1 c.1.10.1 (A:13-331) Transaldolase {Mouse (Mus musculus) [TaxId: 10090]} Length = 319 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Aldolase
family: Class I aldolase
domain: Transaldolase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  151 bits (381), Expect = 8e-43
 Identities = 68/338 (20%), Positives = 122/338 (36%), Gaps = 61/338 (18%)

Query: 109 GVRGVTSNPAIFQKAISSSNAYNDQFRELVQSGKDIEAAYWELVIKDIQDACKLFESIYD 168
             +  T+NP++   A     AY +   E +  GK +     E +   I     LF    +
Sbjct: 26  KPQDATTNPSLILAAAQMP-AYQELVEEAIAYGKKLGGPQEEQIKNAIDKLFVLF--GAE 82

Query: 169 ETNGGDGYVSVEVSPRLADDTQGTVEAAKWLHK-----VVNRPNVYIKIPATAPCVPSIK 223
                 G VS EV  RL+ D    V  A+ L +      V +  + IK+ +T   + + K
Sbjct: 83  ILKKIPGRVSTEVDARLSFDKDAMVARARRLIELYKEAGVGKDRILIKLSSTWEGIQAGK 142

Query: 224 EVISQ-GISVNVTLIFSLARYEEVIDAYLDGLEASGLSDLSRVTSVASFFVSRVDTLIDK 282
           E+  Q GI  N+TL+FS A+     +A +  +               S FV R+      
Sbjct: 143 ELEEQHGIHCNMTLLFSFAQAVACAEAGVTLI---------------SPFVGRILDWHVA 187

Query: 283 MLEKIGTPEALDLRGKAAVAQAALAYQLYQKKFSGPRWDALVKKGAKKQRLLWASTSVKN 342
             +K    ++ + +G   V      Y  Y+K                        T V  
Sbjct: 188 NTDK----KSYEPQGDPGVKSVTKIYNYYKK--------------------FGYKTIVMG 223

Query: 343 PAYPDTLYVAPLIGPDTVSTMPDQALQAFVDHGAVSRTIDLNVSEAEGIYSALEKLGID- 401
            ++ +T  +  L G D ++  P    +   D+  ++  + +  ++     S  EK+ +D 
Sbjct: 224 ASFRNTGEIKALAGCDFLTISPKLLGELLKDNSKLAPALSVKAAQT----SDSEKIHLDE 279

Query: 402 ----W----NYVGTQLELEGVDSFKKSFDSLLDTLQEK 431
               W    + +  +   +G+  F      L   L E+
Sbjct: 280 KAFRWLHNEDQMAVEKLSDGIRKFAADAIKLERMLTER 317
>d1onra_ c.1.10.1 (A:) Transaldolase {Escherichia coli [TaxId: 562]} Length = 316 Back     information, alignment and structure
>d1wx0a1 c.1.10.1 (A:1-211) Decameric fructose-6-phosphate aldolase/transaldolase {Thermus thermophilus [TaxId: 274]} Length = 211 Back     information, alignment and structure
>d1l6wa_ c.1.10.1 (A:) Decameric fructose-6-phosphate aldolase/transaldolase {Escherichia coli [TaxId: 562]} Length = 220 Back     information, alignment and structure
>d1vpxa_ c.1.10.1 (A:) Decameric fructose-6-phosphate aldolase/transaldolase {Thermotoga maritima [TaxId: 2336]} Length = 218 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query440
d2e1da1319 Transaldolase {Mouse (Mus musculus) [TaxId: 10090] 100.0
d1onra_316 Transaldolase {Escherichia coli [TaxId: 562]} 100.0
d1l6wa_220 Decameric fructose-6-phosphate aldolase/transaldol 100.0
d1wx0a1211 Decameric fructose-6-phosphate aldolase/transaldol 100.0
d1vpxa_218 Decameric fructose-6-phosphate aldolase/transaldol 100.0
>d2e1da1 c.1.10.1 (A:13-331) Transaldolase {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Aldolase
family: Class I aldolase
domain: Transaldolase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=2.3e-58  Score=460.14  Aligned_cols=302  Identities=23%  Similarity=0.309  Sum_probs=238.9

Q ss_pred             HHHHHhhcCccccccccccccccHHHHHhCCCCccccChHHHHHHHhCCcchHHHHHHHHHcCCChHHHHHHHHHHHHHH
Q 036665           79 LHDLYEQEGQSPWYDNLCRPVTDLLPLIASGVRGVTSNPAIFQKAISSSNAYNDQFRELVQSGKDIEAAYWELVIKDIQD  158 (440)
Q Consensus        79 l~~l~~~~gqs~W~D~i~R~~~el~~li~~Gv~GvTTNPsI~~kAi~~~~~Y~~~i~~l~~~g~~~~e~y~~L~i~di~~  158 (440)
                      |.+|.  .-+.+-+|..  +++.+   -++++.|+|||||||.||+. +|.|+++|++++..++.....++    +++..
T Consensus         3 L~~l~--~~t~vv~DT~--d~~~I---~~~~p~~~TTNPSii~kA~~-~~~y~~li~~~~~~~k~~~~~~~----~~i~~   70 (319)
T d2e1da1           3 LDQLK--QFTTVVADTG--DFNAI---DEYKPQDATTNPSLILAAAQ-MPAYQELVEEAIAYGKKLGGPQE----EQIKN   70 (319)
T ss_dssp             HHHHT--TTSEEEEECS--CGGGT---TTTCCSEEECCHHHHHHHHT-SGGGHHHHHHHHHHHHHHCSSHH----HHHHH
T ss_pred             hHHhh--CCCEEeCCCc--CHHHH---HhcCCCCeeeCHHHHHHHhc-ChhHHHHHHHHHHHhhhcCCchH----HHHHH
Confidence            55562  3445666665  24444   34689999999999999976 69999999999887655433333    34556


Q ss_pred             HHHHhHHhhhh--cCCCCccEEEEecCCCCCCHHHHHHHHHHHHhh-----cCCCcEEEEcCCCcchHHHHHHHH-HCCC
Q 036665          159 ACKLFESIYDE--TNGGDGYVSVEVSPRLADDTQGTVEAAKWLHKV-----VNRPNVYIKIPATAPCVPSIKEVI-SQGI  230 (440)
Q Consensus       159 a~d~l~p~~~~--~~g~~G~VS~EVdP~la~D~e~~v~eA~~L~~~-----v~r~nv~IKIPaT~eGi~Ai~~L~-~~GI  230 (440)
                      +++.+.+.|+.  +++.+|+||+||||++++|+++||++|++|+++     +++||+|||||+||+||+|+++|. ++||
T Consensus        71 ~~d~~~~~~~~~~~~~~~G~VS~EVdp~la~d~~~~i~~A~~l~~l~~~~~i~~~~v~IKIPaT~eGi~A~~~L~~~~GI  150 (319)
T d2e1da1          71 AIDKLFVLFGAEILKKIPGRVSTEVDARLSFDKDAMVARARRLIELYKEAGVGKDRILIKLSSTWEGIQAGKELEEQHGI  150 (319)
T ss_dssp             HHHHHHHHHHHHHHHHCSSCEEEECCGGGTTCHHHHHHHHHHHHHHHHHTTCCGGGEEEEEECSHHHHHHHHHHHHHHCC
T ss_pred             HHHHHHHHHHHHHhcCCCCCeEEEECCCcccCHHHHHHHHHHHHHHHHhcCCCCCceEEcCCCchHHHHHHHHHHHhcCc
Confidence            67777777754  889999999999999999999999999999995     889999999999999999999996 6699


Q ss_pred             ceEEeecCCHHHHHHHHHHHHHHHHHcCCCCCCccceEEeechhhhhHHHhhhhhhcCCccccccchHHHHHHHHHHHHH
Q 036665          231 SVNVTLIFSLARYEEVIDAYLDGLEASGLSDLSRVTSVASFFVSRVDTLIDKMLEKIGTPEALDLRGKAAVAQAALAYQL  310 (440)
Q Consensus       231 ~vN~TlIFS~~Qa~a~aqA~lagl~~aG~~~~~~vasviSpfVgRiD~~~d~~l~~~g~~~a~~~~G~~~Ia~a~~~y~~  310 (440)
                      +||+|+|||+.||.+|++|        |       ++|+||||||+|+|.++..+...    .+..|..+|.+++.+|++
T Consensus       151 ~vN~TliFS~~Qa~~aa~A--------g-------a~~iSpfVgRi~d~~~~~~~~~~----~~~~g~~gi~~~~~i~~~  211 (319)
T d2e1da1         151 HCNMTLLFSFAQAVACAEA--------G-------VTLISPFVGRILDWHVANTDKKS----YEPQGDPGVKSVTKIYNY  211 (319)
T ss_dssp             CEEEEEECSHHHHHHHHHH--------T-------CSEEEEBSHHHHHHHHHHSSCCC----CCGGGCHHHHHHHHHHHH
T ss_pred             eeeEEEEeeHHHHHHHHhc--------C-------ceEEEeeccchhhhhhccccccc----cccccccHHHHHHHHHHH
Confidence            9999999999999999998        7       89999999999999887654322    234577778889999999


Q ss_pred             HHhccCCcchHHHHhcCCccceeeeeeccccCCCCCchhhhhhhcCCCeeccCcHHHHHHHH-hCCccccccccchhHHh
Q 036665          311 YQKKFSGPRWDALVKKGAKKQRLLWASTSVKNPAYPDTLYVAPLIGPDTVSTMPDQALQAFV-DHGAVSRTIDLNVSEAE  389 (440)
Q Consensus       311 y~~~f~~~~w~~l~~~G~~~qrlL~ASTsvKn~~~~~~~~v~~L~G~d~v~TiP~~~l~al~-~~~~~~~~l~~~~~~a~  389 (440)
                      |+            ++|+++ +||+|  |+||     ..|+.+|+|||+| |+||+++.++. +|+.+.+.++.......
T Consensus       212 ~~------------~~~~~T-~v~~A--S~r~-----~~~v~~laG~d~v-Ti~p~~~~~l~~~~~~~~~~l~~~~~~~~  270 (319)
T d2e1da1         212 YK------------KFGYKT-IVMGA--SFRN-----TGEIKALAGCDFL-TISPKLLGELLKDNSKLAPALSVKAAQTS  270 (319)
T ss_dssp             HH------------HTTCCC-EEEEB--CCSS-----HHHHHTTTTSSEE-EECHHHHHHHHHCCCCCCCCCCHHHHTTC
T ss_pred             HH------------HhCcCc-eeecc--cccc-----hhHHHHHcCCCeE-ecCHHHHHHHHhccCcccccCChhhcccc
Confidence            97            368875 78888  5655     5688999999999 78888888886 57766666654332221


Q ss_pred             hHH-hHhHhhcCcHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036665          390 GIY-SALEKLGIDWN----YVGTQLELEGVDSFKKSFDSLLDTLQEKA  432 (440)
Q Consensus       390 ~~~-~~l~~~~id~~----~~~~~L~~eGi~~F~~~~~~Ll~~l~~k~  432 (440)
                      ... -.+++..|+|.    .++.+|+.|||++|+++|++|++.|++|+
T Consensus       271 ~~~~~~~de~~fr~~~~~d~~a~ekl~eGi~~F~~~~~~L~~~i~~kl  318 (319)
T d2e1da1         271 DSEKIHLDEKAFRWLHNEDQMAVEKLSDGIRKFAADAIKLERMLTERM  318 (319)
T ss_dssp             SCCCCCCCHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccCCCCCHHHHHHHhccChhHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            111 12344444554    46789999999999999999999999986
>d1onra_ c.1.10.1 (A:) Transaldolase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1l6wa_ c.1.10.1 (A:) Decameric fructose-6-phosphate aldolase/transaldolase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1wx0a1 c.1.10.1 (A:1-211) Decameric fructose-6-phosphate aldolase/transaldolase {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1vpxa_ c.1.10.1 (A:) Decameric fructose-6-phosphate aldolase/transaldolase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure