Citrus Sinensis ID: 042388

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------
MSNTNAPTVKKDGPGRLASVYSELQTSRLNVSLPLPSVLKKTFNVVDGAPSSASGNPEEIKKLFPKLFGQPSARLVECDPKACSMENKSLKIGVVLSGGQAPGGHNVISGIFDYLQERTNGSKLYGFKGGPAGIMKCKYVELSTEYIYPYRNQGGFDMICSGRDKIETPEQFKQAEETAKKLDLDGLVVIGGDDSNTNACLLAENFRSKDMKTRVIGCPKTIDGDLKCKEVPTSFGFDTACKIFSEMIGNVMTDARSTGKYYHFVRLMGRAASHITLECALQTHPNITIIGEEVAAKKQTLKNVTDYITDIICKRSEAGYNYGVILIPEGLIDFIPEVQQLIAELNEILAHDGVDQDGAWKKKLKSQSQELFELFPKAIQEQLLLERDPHGNVQVAKIETEKMLIQMVETELNKMKQKGAYKGQFNGQSHFFGYEGRCGLPTNFDANYCYALGYAAAALLHAGKTGLISSVGNLGEPVEEWTVGGTALTSLMDVERRHGKFKPVIKKAMVELEGIPFKTFASLREDWTIKNLYVSPGPIQFVGPNANDINHTLKLELGPPAQAKLNK
ccccccccccccccccccccccHHHHHHHccccccccccccccEEEccccccccccHHHHHHHcccccccccEEEEEcccccccccccccEEEEEcccccccHHHHHHHHHHHHHHHHccccEEEEEcccccccccccEEEcccccccccccccccccccccccccccHHHHHHHHHHHHHccccEEEEEccccHHHHHHHHHHHHcccccccEEEEEccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHcccEEEEEEEccccccHHHHHHHHHccccEEEEccccHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEccccccccHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHcHHHHHHHHHHcccccccEEEEcHHHHHHHHHHHHHHHHHHHHccccccccccccEEcccccccccccHHHHHHHHHHHHHHHHHHHccccEEEEEEEcccccccccEEccccccccHHHHHHcccccccEEcccccccccHHHHHHHHHHHHHHccccccccccccccccccccccEEEEccccccHHcccc
cccccccccccccccccHHHHHHHHHHHHHHcccccHHcccccEEEEcccccccccHHHHHHHccccccccEEEEEcccccccccccccEEEEEEEcccccccHHHHHHHHHHHHHHHccccEEEEEEccccccccccEEEccHHHHHHHHcccccEEEcccccccccHHHHHHHHHHHHHHccccEEEEEcHHHHHHHHHHHHHHHHcccccEEEEEccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEccccHHHHHHHHHHHccccEEEEcccHHHccccHHHHHHHHHHHHHHHHHcccccEEEEEcccHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHcccHHHHHHHHHccHHHHHHHHHcccccccEEEEEccHHHHHHHHHHHHHHHHHHccccccccccEEEEcccEEcccccccccHHHHHHHHHHHHHHHHccccEEEEEEccccccHHHccccccHHHHHHHHHHcccccccEEcccEEccccHHHHHHHHHHHHHHHHccccccccEEEccccccccccEEEHHcccHHHHHccc
msntnaptvkkdgpgrlASVYSELQTsrlnvslplpsvlkktfnvvdgapssasgnpeeIKKLFpklfgqpsarlvecdpkacsmenkslKIGVVLsggqapgghnvISGIFDYLqertngsklygfkggpagimkckyvelSTEYIypyrnqggfdmicsgrdkietpeQFKQAEETAKKLDldglvviggddsntnaCLLAenfrskdmktrvigcpktidgdlkckevptsfgfdTACKIFSEMIGNVMTDARSTGKYYHFVRLMGRAASHITLECalqthpniTIIGEEVAAKKQTLKNVTDYITDIICKrseagynygvilipeglidFIPEVQQLIAELNEILahdgvdqdgawKKKLKSQSQELFELFPKAIQEQLLlerdphgnvqvAKIETEKMLIQMVETELNKmkqkgaykgqfngqshffgyegrcglptnfdanYCYALGYAAAALLHAGKtglissvgnlgepveewtvggtaLTSLMDVerrhgkfkpVIKKAMVELegipfktfaslREDWtiknlyvspgpiqfvgpnandinhtlklelgppaqaklnk
msntnaptvkkdgpgrLASVYSELQtsrlnvslplpsVLKKTFNVVDgapssasgnpeEIKKLFPKLFGQPSARLVECDPKACSMENKSLKIGVVLSGGQAPGGHNVISGIFDYLQERTNGSKlygfkggpagIMKCKYVELSTEYIYPYRNQGGFDMICSGRDKIETPEQFKQAEETAKKLDLDGLVVIGGDDSNTNACLLaenfrskdmktrvigcpktidgdlkckevptSFGFDTACKIFSEMIGNVMTDARSTGKYYHFVRLMGRAASHITLECALQTHPNITIIGEevaakkqtlkNVTDYITDIICKRSEAGYNYGVILIPEGLIDFIPEVQQLIAELNEILAHDGVDQDGAWKKKLKSQSQELFELFPKAIQEQLLLERDPHGNVQVAKIETEKMLIQMVETELNKMKQKGAYKGQFNGQSHFFGYEGRCGLPTNFDANYCYALGYAAAALLHAGKTGLISSVGNLGEPVEEWTVGGTALTSLMDVERRHGKFKPVIKKAMVELEGIPFKTFASLREDWTIKNLYVSPGPIQFVGPNANDINHTLklelgppaqaklnk
MSNTNAPTVKKDGPGRLASVYSELQTSRLNVSLPLPSVLKKTFNVVDGAPSSASGNPEEIKKLFPKLFGQPSARLVECDPKACSMENKSLKIGVVLSGGQAPGGHNVISGIFDYLQERTNGSKLYGFKGGPAGIMKCKYVELSTEYIYPYRNQGGFDMICSGRDKIETPEQFKQAEETAKKldldglvviggddSNTNACLLAENFRSKDMKTRVIGCPKTIDGDLKCKEVPTSFGFDTACKIFSEMIGNVMTDARSTGKYYHFVRLMGRAASHITLECALQTHPNITIIGEEVAAKKQTLKNVTDYITDIICKRSEAGYNYGVILIPEGLIDFIPEVQQLIAELNEILAHDGVDQDGAWKKKLKSQSQELFELFPKAIQEQLLLERDPHGNVQVAKIETEKMLIQMVETELNKMKQKGAYKGQFNGQSHFFGYEGRCGLPTNFDanycyalgyaaaallhaGKTGLISSVGNLGEPVEEWTVGGTALTSLMDVERRHGKFKPVIKKAMVELEGIPFKTFASLREDWTIKNLYVSPGPIQFVGPNANDINHTLKLELGPPAQAKLNK
******************************VSLPLPSVLKKTFNV******************FPKLFGQ*SARLVECDPKACSMENKSLKIGVVLSGGQAPGGHNVISGIFDYLQERTNGSKLYGFKGGPAGIMKCKYVELSTEYIYPYRNQGGFDMICSGRD****************KLDLDGLVVIGGDDSNTNACLLAENFRSKDMKTRVIGCPKTIDGDLKCKEVPTSFGFDTACKIFSEMIGNVMTDARSTGKYYHFVRLMGRAASHITLECALQTHPNITIIGEEVAAKKQTLKNVTDYITDIICKRSEAGYNYGVILIPEGLIDFIPEVQQLIAELNEILAHDGVDQDGAWKKKL****QELFELFPKAIQEQLLLERDPHGNVQVAKIETEKMLIQMVETELNKMKQKGAYKGQFNGQSHFFGYEGRCGLPTNFDANYCYALGYAAAALLHAGKTGLISSVGNLGEPVEEWTVGGTALTSLMDVERRHGKFKPVIKKAMVELEGIPFKTFASLREDWTIKNLYVSPGPIQFVGPNANDINHTL**************
****************LASVYSELQTSRLNVSLPLPSVLKKTFNVVDG**********EIKKLFPKLFGQPSAR**************SLKIGVVLSGGQAPGGHNVISGIFDYLQERTNGSKLYGFKGGPAGIMKCKYVELSTEYIYPYRNQGGFDMICSGRDK*E**EQFKQAEETAKKLDLDGLVVIGGDDSNTNACLLAENFRSKDMKTRVIGCPKTIDGDLKCKEVPTSFGFDTACKIFSEMIGNVMTDARSTGKYYHFVRLMGRAASHITLECALQTHPNITIIGEEVAAKKQTLKNVTDYITDIICKRSEAGYNYGVILIPEGLIDFIPEVQQLIAELNEILAHDGVDQDGAWKKKLKSQSQELFELFPKAIQEQLLLERDPHGNVQVAKIETEKMLIQMVETELNKMKQKGAYKGQFNGQSHFFGYEGRCGLPTNFDANYCYALGYAAAALLHAGKTGLISSVGNLGEPVEEWTVGGTALTSLMDVER******PVIKKAMVELEGIPFKTFASLREDWTIKNLYVSPGPIQFVGPNANDINHTLKLELG*********
*********KKDGPGRLASVYSELQTSRLNVSLPLPSVLKKTFNVVDG********PEEIKKLFPKLFGQPSARLVECDPKACSMENKSLKIGVVLSGGQAPGGHNVISGIFDYLQERTNGSKLYGFKGGPAGIMKCKYVELSTEYIYPYRNQGGFDMICSGRDKIETPEQFKQAEETAKKLDLDGLVVIGGDDSNTNACLLAENFRSKDMKTRVIGCPKTIDGDLKCKEVPTSFGFDTACKIFSEMIGNVMTDARSTGKYYHFVRLMGRAASHITLECALQTHPNITIIGEEVAAKKQTLKNVTDYITDIICKRSEAGYNYGVILIPEGLIDFIPEVQQLIAELNEILAHDGVDQDGAWKKKLKSQSQELFELFPKAIQEQLLLERDPHGNVQVAKIETEKMLIQMVETELNKMKQKGAYKGQFNGQSHFFGYEGRCGLPTNFDANYCYALGYAAAALLHAGKTGLISSVGNLGEPVEEWTVGGTALTSLMDVERRHGKFKPVIKKAMVELEGIPFKTFASLREDWTIKNLYVSPGPIQFVGPNANDINHTLKLELGPPAQAKLNK
***************RLASVYSELQTSRLNVSLPLPSVLKKTFNVVDGAPSSASGNPEEIKKLFPKLFGQPSARLVECDPKACSMENKSLKIGVVLSGGQAPGGHNVISGIFDYLQERTNGSKLYGFKGGPAGIMKCKYVELSTEYIYPYRNQGGFDMICSGRDKIETPEQFKQAEETAKKLDLDGLVVIGGDDSNTNACLLAENFRSKDMKTRVIGCPKTIDGDLKCKEVPTSFGFDTACKIFSEMIGNVMTDARSTGKYYHFVRLMGRAASHITLECALQTHPNITIIGEEVAAKKQTLKNVTDYITDIICKRSEAGYNYGVILIPEGLIDFIPEVQQLIAELNEILAHDGVDQDGAWKKKLKSQSQELFELFPKAIQEQLLLERDPHGNVQVAKIETEKMLIQMVETELNKMKQKGAYKGQFNGQSHFFGYEGRCGLPTNFDANYCYALGYAAAALLHAGKTGLISSVGNLGEPVEEWTVGGTALTSLMDVERRHGKFKPVIKKAMVELEGIPFKTFASLREDWTIKNLYVSPGPIQFVGPNANDINHTLKLELGPPA******
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MSNTNAPTVKKDGPGRLASVYSELQTSRLNVSLPLPSVLKKTFNVVDGAPSSASGNPEEIKKLFPKLFGQPSARLVECDPKACSMENKSLKIGVVLSGGQAPGGHNVISGIFDYLQERTNGSKLYGFKGGPAGIMKCKYVELSTEYIYPYRNQGGFDMICSGRDKIETPEQFKQAEETAKKLDLDGLVVIGGDDSNTNACLLAENFRSKDMKTRVIGCPKTIDGDLKCKEVPTSFGFDTACKIFSEMIGNVMTDARSTGKYYHFVRLMGRAASHITLECALQTHPNITIIGEEVAAKKQTLKNVTDYITDIICKRSEAGYNYGVILIPEGLIDFIPEVQQLIAELNEILAHDGVDQDGAWKKKLKSQSQELFELFPKAIQEQLLLERDPHGNVQVAKxxxxxxxxxxxxxxxxxxxxxGAYKGQFNGQSHFFGYEGRCGLPTNFDANYCYALGYAAAALLHAGKTGLISSVGNLGEPVEEWTVGGTALTSLMDVERRHGKFKPVIKKAMVELEGIPFKTFASLREDWTIKNLYVSPGPIQFVGPNANDINHTLKLELGPPAQAKLNK
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query567 2.2.26 [Sep-21-2011]
Q8W4M5566 Pyrophosphate--fructose 6 yes no 0.968 0.969 0.816 0.0
Q41141552 Pyrophosphate--fructose 6 N/A no 0.962 0.989 0.822 0.0
P21343552 Pyrophosphate--fructose 6 N/A no 0.961 0.987 0.811 0.0
F4JGR5569 Pyrophosphate--fructose 6 no no 0.961 0.957 0.782 0.0
P21342616 Pyrophosphate--fructose 6 N/A no 0.938 0.863 0.401 1e-115
Q9C9K3617 Pyrophosphate--fructose 6 no no 0.924 0.849 0.409 1e-114
Q41140617 Pyrophosphate--fructose 6 N/A no 0.940 0.863 0.409 1e-113
Q9SYP2614 Pyrophosphate--fructose 6 no no 0.924 0.853 0.409 1e-112
B0K6L2321 6-phosphofructokinase OS= yes no 0.400 0.707 0.292 4e-18
B0K7U7321 6-phosphofructokinase OS= yes no 0.400 0.707 0.292 4e-18
>sp|Q8W4M5|PFPB1_ARATH Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta 1 OS=Arabidopsis thaliana GN=PFP-BETA1 PE=2 SV=1 Back     alignment and function desciption
 Score =  937 bits (2422), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 455/557 (81%), Positives = 495/557 (88%), Gaps = 8/557 (1%)

Query: 2   SNTNAPTVKKDGPGRLASVYSELQTSRLNVSLPLPSVLKKTFNVVDGAPSSASGNPEEIK 61
           S  NAP       GR ASVYSE+Q+SR+N +LPLPSVLK  F +V+G  SSA+GNP+EI 
Sbjct: 16  SPENAPA-----KGR-ASVYSEVQSSRINNTLPLPSVLKGAFKIVEGPASSAAGNPDEIA 69

Query: 62  KLFPKLFGQPSARLVECDPKACSMENKSLKIGVVLSGGQAPGGHNVISGIFDYLQERTNG 121
           KLFP L+GQPS  +V  D  A S   K LKIGVVLSGGQAPGGHNVISG+FDYLQER  G
Sbjct: 70  KLFPGLYGQPSVAVVP-DQDAPSSAPK-LKIGVVLSGGQAPGGHNVISGLFDYLQERAKG 127

Query: 122 SKLYGFKGGPAGIMKCKYVELSTEYIYPYRNQGGFDMICSGRDKIETPEQFKQAEETAKK 181
           S  YGFKGGPAGIMKCKYVEL+ EYI PYRNQGGFDMICSGRDKIETP+QFKQAEETAKK
Sbjct: 128 STFYGFKGGPAGIMKCKYVELNAEYIQPYRNQGGFDMICSGRDKIETPDQFKQAEETAKK 187

Query: 182 LDLDGLVVIGGDDSNTNACLLAENFRSKDMKTRVIGCPKTIDGDLKCKEVPTSFGFDTAC 241
           LDLDGLVVIGGDDSNTNACLLAENFRSK++KTRVIGCPKTIDGDLKCKEVPTSFGFDTAC
Sbjct: 188 LDLDGLVVIGGDDSNTNACLLAENFRSKNLKTRVIGCPKTIDGDLKCKEVPTSFGFDTAC 247

Query: 242 KIFSEMIGNVMTDARSTGKYYHFVRLMGRAASHITLECALQTHPNITIIGEEVAAKKQTL 301
           KI+SEMIGNVM DARSTGKYYHFVRLMGRAASHITLECALQTHPNITIIGEEV+A+KQTL
Sbjct: 248 KIYSEMIGNVMIDARSTGKYYHFVRLMGRAASHITLECALQTHPNITIIGEEVSAQKQTL 307

Query: 302 KNVTDYITDIICKRSEAGYNYGVILIPEGLIDFIPEVQQLIAELNEILAHDGVDQDGAWK 361
           KNVTDY+ D+ICKR+E GYNYGVILIPEGLIDFIPEVQ+LIAELNEILA++ VD++G WK
Sbjct: 308 KNVTDYMVDVICKRAELGYNYGVILIPEGLIDFIPEVQELIAELNEILANEVVDENGLWK 367

Query: 362 KKLKSQSQELFELFPKAIQEQLLLERDPHGNVQVAKIETEKMLIQMVETELNKMKQKGAY 421
           KKL  QS +LF+L P+AIQEQL+LERDPHGNVQVAKIETEKMLIQMVETEL K KQ GAY
Sbjct: 368 KKLTEQSLKLFDLLPEAIQEQLMLERDPHGNVQVAKIETEKMLIQMVETELEKRKQAGAY 427

Query: 422 KGQFNGQSHFFGYEGRCGLPTNFDANYCYALGYAAAALLHAGKTGLISSVGNLGEPVEEW 481
           KGQF GQSHFFGYEGRCGLPTNFDA YCYALGY A  LL++GKTGLISSVGNL  PVEEW
Sbjct: 428 KGQFMGQSHFFGYEGRCGLPTNFDATYCYALGYGAGVLLNSGKTGLISSVGNLAAPVEEW 487

Query: 482 TVGGTALTSLMDVERRHGKFKPVIKKAMVELEGIPFKTFASLREDWTIKNLYVSPGPIQF 541
           TVGGTALT+LMDVERRHGKFKPVIKKAMVELEG PFK FASLRE+W +KN Y+SPGPIQF
Sbjct: 488 TVGGTALTALMDVERRHGKFKPVIKKAMVELEGAPFKKFASLREEWALKNRYISPGPIQF 547

Query: 542 VGPNANDINHTLKLELG 558
            GP ++ ++HTL LELG
Sbjct: 548 TGPGSDSLSHTLLLELG 564
Catalytic subunit of pyrophosphate--fructose 6-phosphate 1-phosphotransferase (PFP).
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: .EC: 9EC: 0
>sp|Q41141|PFPB_RICCO Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta OS=Ricinus communis GN=PFP-BETA PE=3 SV=1 Back     alignment and function description
>sp|P21343|PFPB_SOLTU Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta OS=Solanum tuberosum PE=1 SV=2 Back     alignment and function description
>sp|F4JGR5|PFPB2_ARATH Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta 2 OS=Arabidopsis thaliana GN=PFP-BETA2 PE=2 SV=1 Back     alignment and function description
>sp|P21342|PFPA_SOLTU Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha OS=Solanum tuberosum PE=1 SV=1 Back     alignment and function description
>sp|Q9C9K3|PFPA2_ARATH Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha 2 OS=Arabidopsis thaliana GN=PFP-ALPHA2 PE=2 SV=1 Back     alignment and function description
>sp|Q41140|PFPA_RICCO Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha OS=Ricinus communis GN=PFP-ALPHA PE=3 SV=1 Back     alignment and function description
>sp|Q9SYP2|PFPA1_ARATH Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha 1 OS=Arabidopsis thaliana GN=PFP-ALPHA1 PE=2 SV=1 Back     alignment and function description
>sp|B0K6L2|K6PF_THEPX 6-phosphofructokinase OS=Thermoanaerobacter sp. (strain X514) GN=pfkA PE=3 SV=1 Back     alignment and function description
>sp|B0K7U7|K6PF_THEP3 6-phosphofructokinase OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=pfkA PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query567
449524629567 PREDICTED: pyrophosphate--fructose 6-pho 0.980 0.980 0.818 0.0
449433998567 PREDICTED: pyrophosphate--fructose 6-pho 0.980 0.980 0.816 0.0
225447117563 PREDICTED: pyrophosphate--fructose 6-pho 0.971 0.978 0.821 0.0
356532285562 PREDICTED: pyrophosphate--fructose 6-pho 0.952 0.960 0.834 0.0
224115922568 predicted protein [Populus trichocarpa] 0.962 0.961 0.820 0.0
226505720564 LOC100282190 [Zea mays] gi|194700662|gb| 0.977 0.982 0.804 0.0
356557949562 PREDICTED: pyrophosphate--fructose 6-pho 0.943 0.951 0.836 0.0
293333945564 uncharacterized protein LOC100382182 [Ze 0.977 0.982 0.804 0.0
3790100566 pyrophosphate-dependent phosphofructokin 0.975 0.977 0.810 0.0
255554757552 phosphofructokinase, putative [Ricinus c 0.962 0.989 0.824 0.0
>gi|449524629|ref|XP_004169324.1| PREDICTED: pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta-like [Cucumis sativus] Back     alignment and taxonomy information
 Score =  960 bits (2481), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 459/561 (81%), Positives = 500/561 (89%), Gaps = 5/561 (0%)

Query: 1   MSNTNAPTVKKDGP---GRLASVYSELQTSRLNVSLPLPSVLKKTFNVVDGAPSSASGNP 57
           +SN  A  VK   P   GR++SVYSE+Q+SR+N +LPLPSVL+  F +VDG PSSA+GNP
Sbjct: 6   ISNGEA-AVKSSSPPLSGRVSSVYSEVQSSRINHNLPLPSVLRSPFTIVDGPPSSAAGNP 64

Query: 58  EEIKKLFPKLFGQPSARLVECDPKACSMENKSLKIGVVLSGGQAPGGHNVISGIFDYLQE 117
           +EI KLFP LFGQPSA+LV  D       +K LKIGVVLSGGQAPGGHNVISGIFDYLQ+
Sbjct: 65  DEIAKLFPNLFGQPSAKLVPSDSNK-GQPDKKLKIGVVLSGGQAPGGHNVISGIFDYLQD 123

Query: 118 RTNGSKLYGFKGGPAGIMKCKYVELSTEYIYPYRNQGGFDMICSGRDKIETPEQFKQAEE 177
              GS LYGF+GGPAGIMKCKY+EL+++YIYPYRNQGGFDMICSGRDKIETPEQFKQAEE
Sbjct: 124 HAKGSVLYGFRGGPAGIMKCKYLELTSDYIYPYRNQGGFDMICSGRDKIETPEQFKQAEE 183

Query: 178 TAKKLDLDGLVVIGGDDSNTNACLLAENFRSKDMKTRVIGCPKTIDGDLKCKEVPTSFGF 237
           TAKKLDLDGLVVIGGDDSNTNACLLAENFR K++KTRVIGCPKTIDGDLKCKEVPTSFGF
Sbjct: 184 TAKKLDLDGLVVIGGDDSNTNACLLAENFRGKNLKTRVIGCPKTIDGDLKCKEVPTSFGF 243

Query: 238 DTACKIFSEMIGNVMTDARSTGKYYHFVRLMGRAASHITLECALQTHPNITIIGEEVAAK 297
           DTAC+I++EMIGNVM DARSTGKYYHFVRLMGRAASHITLECALQTHPNITIIGEEV A+
Sbjct: 244 DTACRIYAEMIGNVMIDARSTGKYYHFVRLMGRAASHITLECALQTHPNITIIGEEVYAQ 303

Query: 298 KQTLKNVTDYITDIICKRSEAGYNYGVILIPEGLIDFIPEVQQLIAELNEILAHDGVDQD 357
           KQTLK+VTDYI D++CKR+E GYNYGVILIPEGLIDFIPEVQQLIAELNEILAHD VD +
Sbjct: 304 KQTLKSVTDYIVDVVCKRAELGYNYGVILIPEGLIDFIPEVQQLIAELNEILAHDVVDDE 363

Query: 358 GAWKKKLKSQSQELFELFPKAIQEQLLLERDPHGNVQVAKIETEKMLIQMVETELNKMKQ 417
           G WKKKL SQS ELFEL P+AIQEQL+LERDPHGNVQVA+IETEKMLIQMVETEL K K 
Sbjct: 364 GLWKKKLTSQSLELFELLPQAIQEQLMLERDPHGNVQVARIETEKMLIQMVETELEKRKS 423

Query: 418 KGAYKGQFNGQSHFFGYEGRCGLPTNFDANYCYALGYAAAALLHAGKTGLISSVGNLGEP 477
           +GAYKGQF GQSHFFGYEGRCGLPTNFD+ YCYALGY A ALL +GKTGLISSVGNL  P
Sbjct: 424 EGAYKGQFKGQSHFFGYEGRCGLPTNFDSTYCYALGYGAGALLQSGKTGLISSVGNLAAP 483

Query: 478 VEEWTVGGTALTSLMDVERRHGKFKPVIKKAMVELEGIPFKTFASLREDWTIKNLYVSPG 537
           VEEWTVGGTALTSLMDVERRHGKFKPVIKKAMVEL+G PFK FASLR+DW   N Y+SPG
Sbjct: 484 VEEWTVGGTALTSLMDVERRHGKFKPVIKKAMVELDGAPFKKFASLRDDWAFNNRYISPG 543

Query: 538 PIQFVGPNANDINHTLKLELG 558
           PIQFVGP +N +NHTL LELG
Sbjct: 544 PIQFVGPASNAVNHTLLLELG 564

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|449433998|ref|XP_004134783.1| PREDICTED: pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|225447117|ref|XP_002271059.1| PREDICTED: pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta [Vitis vinifera] gi|297739202|emb|CBI28853.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356532285|ref|XP_003534704.1| PREDICTED: pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta-like [Glycine max] Back     alignment and taxonomy information
>gi|224115922|ref|XP_002317160.1| predicted protein [Populus trichocarpa] gi|222860225|gb|EEE97772.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|226505720|ref|NP_001148574.1| LOC100282190 [Zea mays] gi|194700662|gb|ACF84415.1| unknown [Zea mays] gi|195620520|gb|ACG32090.1| pyrophosphate--fructose 6-phosphate 1-phosphotransferase beta subunit [Zea mays] Back     alignment and taxonomy information
>gi|356557949|ref|XP_003547272.1| PREDICTED: pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta-like [Glycine max] Back     alignment and taxonomy information
>gi|293333945|ref|NP_001168412.1| uncharacterized protein LOC100382182 [Zea mays] gi|223948099|gb|ACN28133.1| unknown [Zea mays] gi|413944222|gb|AFW76871.1| ppi-phosphofructokinase [Zea mays] Back     alignment and taxonomy information
>gi|3790100|gb|AAC67586.1| pyrophosphate-dependent phosphofructokinase beta subunit [Citrus x paradisi] Back     alignment and taxonomy information
>gi|255554757|ref|XP_002518416.1| phosphofructokinase, putative [Ricinus communis] gi|223542261|gb|EEF43803.1| phosphofructokinase, putative [Ricinus communis] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query567
TAIR|locus:2008920566 AT1G12000 [Arabidopsis thalian 0.954 0.955 0.784 3.7e-229
TAIR|locus:2136652569 MEE51 "maternal effect embryo 0.961 0.957 0.739 8.2e-218
TAIR|locus:2011671617 AT1G76550 [Arabidopsis thalian 0.924 0.849 0.383 1.1e-94
TAIR|locus:2037385614 AT1G20950 [Arabidopsis thalian 0.924 0.853 0.383 5e-92
UNIPROTKB|P65690343 pfkA "6-phosphofructokinase" [ 0.409 0.676 0.269 1.2e-09
TIGR_CMR|CHY_1349361 CHY_1349 "phosphofructokinase" 0.402 0.631 0.245 1.4e-09
TAIR|locus:2165046485 PFK7 "phosphofructokinase 7" [ 0.333 0.389 0.25 1.6e-08
TAIR|locus:2160897444 PFK2 "phosphofructokinase 2" [ 0.511 0.653 0.222 1.1e-07
TIGR_CMR|CHY_1143321 CHY_1143 "6-phosphofructokinas 0.389 0.688 0.263 1.1e-07
TAIR|locus:2136849489 PFK3 "phosphofructokinase 3" [ 0.333 0.386 0.255 2.1e-07
TAIR|locus:2008920 AT1G12000 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2211 (783.4 bits), Expect = 3.7e-229, P = 3.7e-229
 Identities = 427/544 (78%), Positives = 465/544 (85%)

Query:    15 GRLASVYSELQTSRLNVSLPLPSVLKKTFNVVDGAPSSASGNPEEIKKLFPKLFGQPSAR 74
             GR ASVYSE+Q+SR+N +LPLPSVLK  F +V+G  SSA+GNP+EI KLFP L+GQPS  
Sbjct:    24 GR-ASVYSEVQSSRINNTLPLPSVLKGAFKIVEGPASSAAGNPDEIAKLFPGLYGQPSVA 82

Query:    75 LVECDPKACSMENKSLKIGVVLSGGQAPGGHNVISGIFDYLQERTNGSKLYGFKGGPAGI 134
             +V  D  A S   K LKIGVVLSGGQAPGGHNVISG+FDYLQER  GS  YGFKGGPAGI
Sbjct:    83 VVP-DQDAPSSAPK-LKIGVVLSGGQAPGGHNVISGLFDYLQERAKGSTFYGFKGGPAGI 140

Query:   135 MKCKYVELSTEYIYPYRNQGGFDMICSGRDKIETPEQFKQAEETAKKXXXXXXXXXXXXX 194
             MKCKYVEL+ EYI PYRNQGGFDMICSGRDKIETP+QFKQAEETAKK             
Sbjct:   141 MKCKYVELNAEYIQPYRNQGGFDMICSGRDKIETPDQFKQAEETAKKLDLDGLVVIGGDD 200

Query:   195 SNTNACLLAENFRSKDMKTRVIGCPKTIDGDLKCKEVPTSFGFDTACKIFSEMIGNVMTD 254
             SNTNACLLAENFRSK++KTRVIGCPKTIDGDLKCKEVPTSFGFDTACKI+SEMIGNVM D
Sbjct:   201 SNTNACLLAENFRSKNLKTRVIGCPKTIDGDLKCKEVPTSFGFDTACKIYSEMIGNVMID 260

Query:   255 ARSTGKYYHFVRLMGRAASHITLECALQTHPNITIIGEEVAAKKQTLKNVTDYITDIICK 314
             ARSTGKYYHFVRLMGRAASHITLECALQTHPNITIIGEEV+A+KQTLKNVTDY+ D+ICK
Sbjct:   261 ARSTGKYYHFVRLMGRAASHITLECALQTHPNITIIGEEVSAQKQTLKNVTDYMVDVICK 320

Query:   315 RSEAGYNYGVILIPEGLIDFIPEVQQLIAELNEILAHDGVDQDGAWKKKLKSQSQELFEL 374
             R+E GYNYGVILIPEGLIDFIPEVQ+LIAELNEILA++ VD++G WKKKL  QS +LF+L
Sbjct:   321 RAELGYNYGVILIPEGLIDFIPEVQELIAELNEILANEVVDENGLWKKKLTEQSLKLFDL 380

Query:   375 FPKAIQEQLLLERDPHGNVQVAKIETEKMLIQMVETELNKMKQKGAYKGQFNGQSHFFGY 434
              P+AIQEQL+LERDPHGNVQVAKIETEKMLIQMVETEL K KQ GAYKGQF GQSHFFGY
Sbjct:   381 LPEAIQEQLMLERDPHGNVQVAKIETEKMLIQMVETELEKRKQAGAYKGQFMGQSHFFGY 440

Query:   435 EGRCGLPTNFDXXXXXXXXXXXXXXXXXGKTGLISSVGNLGEPVEEWTVGGTALTSLMDV 494
             EGRCGLPTNFD                 GKTGLISSVGNL  PVEEWTVGGTALT+LMDV
Sbjct:   441 EGRCGLPTNFDATYCYALGYGAGVLLNSGKTGLISSVGNLAAPVEEWTVGGTALTALMDV 500

Query:   495 ERRHGKFKPVIKKAMVELEGIPFKTFASLREDWTIKNLYVSPGPIQFVGPNANDINHTLK 554
             ERRHGKFKPVIKKAMVELEG PFK FASLRE+W +KN Y+SPGPIQF GP ++ ++HTL 
Sbjct:   501 ERRHGKFKPVIKKAMVELEGAPFKKFASLREEWALKNRYISPGPIQFTGPGSDSLSHTLL 560

Query:   555 LELG 558
             LELG
Sbjct:   561 LELG 564
GO:0003872 "6-phosphofructokinase activity" evidence=IEA
GO:0005524 "ATP binding" evidence=IEA
GO:0005737 "cytoplasm" evidence=ISM
GO:0005945 "6-phosphofructokinase complex" evidence=IEA
GO:0006096 "glycolysis" evidence=IEA;ISS
GO:0010318 "pyrophosphate-dependent phosphofructokinase complex, beta-subunit complex" evidence=ISS
GO:0047334 "diphosphate-fructose-6-phosphate 1-phosphotransferase activity" evidence=IEA;ISS;IMP
GO:0005618 "cell wall" evidence=IDA
GO:0046686 "response to cadmium ion" evidence=IEP
GO:0016020 "membrane" evidence=IDA
GO:0015979 "photosynthesis" evidence=IMP
GO:0005829 "cytosol" evidence=IDA
GO:0006084 "acetyl-CoA metabolic process" evidence=RCA
GO:0006085 "acetyl-CoA biosynthetic process" evidence=RCA
GO:0006342 "chromatin silencing" evidence=RCA
GO:0051567 "histone H3-K9 methylation" evidence=RCA
TAIR|locus:2136652 MEE51 "maternal effect embryo arrest 51" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2011671 AT1G76550 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2037385 AT1G20950 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|P65690 pfkA "6-phosphofructokinase" [Mycobacterium tuberculosis (taxid:1773)] Back     alignment and assigned GO terms
TIGR_CMR|CHY_1349 CHY_1349 "phosphofructokinase" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)] Back     alignment and assigned GO terms
TAIR|locus:2165046 PFK7 "phosphofructokinase 7" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2160897 PFK2 "phosphofructokinase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TIGR_CMR|CHY_1143 CHY_1143 "6-phosphofructokinase" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)] Back     alignment and assigned GO terms
TAIR|locus:2136849 PFK3 "phosphofructokinase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q41141PFPB_RICCO2, ., 7, ., 1, ., 9, 00.82260.96290.9891N/Ano
F4JGR5PFPB2_ARATH2, ., 7, ., 1, ., 9, 00.78200.96110.9578nono
P21343PFPB_SOLTU2, ., 7, ., 1, ., 9, 00.81130.96110.9873N/Ano
Q8W4M5PFPB1_ARATH2, ., 7, ., 1, ., 9, 00.81680.96820.9699yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
4th Layer2.7.1.900.979
3rd Layer2.7.10.983

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00025935001
SubName- Full=Chromosome chr12 scaffold_36, whole genome shotgun sequence; (563 aa)
(Vitis vinifera)
Predicted Functional Partners:
GSVIVG00011477001
SubName- Full=Chromosome undetermined scaffold_310, whole genome shotgun sequence; (526 aa)
  •  • •0.909
GSVIVG00020939001
SubName- Full=Chromosome chr14 scaffold_21, whole genome shotgun sequence; (480 aa)
  •  •••0.909
GSVIVG00016633001
SubName- Full=Chromosome chr11 scaffold_13, whole genome shotgun sequence; (491 aa)
  •  •••0.909
GSVIVG00032133001
SubName- Full=Chromosome chr4 scaffold_6, whole genome shotgun sequence; (488 aa)
  •  •••0.908
GSVIVG00014270001
SubName- Full=Chromosome chr16 scaffold_10, whole genome shotgun sequence; (533 aa)
  •  • •0.908
GSVIVG00014427001
SubName- Full=Chromosome chr18 scaffold_1, whole genome shotgun sequence; (485 aa)
     •• 0.901
GSVIVG00016656001
SubName- Full=Chromosome chr11 scaffold_13, whole genome shotgun sequence; (470 aa)
     •• 0.901
GSVIVG00034293001
SubName- Full=Chromosome chr9 scaffold_7, whole genome shotgun sequence; (498 aa)
     •• 0.900
GSVIVG00038234001
RecName- Full=Mannose-6-phosphate isomerase; EC=5.3.1.8; (420 aa)
     •  0.899
GSVIVG00036826001
RecName- Full=Fructose-bisphosphate aldolase; EC=4.1.2.13; (396 aa)
     •  0.899

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query567
PLN02251568 PLN02251, PLN02251, pyrophosphate-dependent phosph 0.0
cd00765550 cd00765, Pyrophosphate_PFK, Phosphofructokinase, a 0.0
TIGR02477539 TIGR02477, PFKA_PPi, diphosphate--fructose-6-phosp 0.0
PRK07085555 PRK07085, PRK07085, diphosphate--fructose-6-phosph 0.0
PTZ00468 1328 PTZ00468, PTZ00468, phosphofructokinase family pro 1e-174
PLN03028610 PLN03028, PLN03028, pyrophosphate--fructose-6-phos 1e-168
PTZ00287 1419 PTZ00287, PTZ00287, 6-phosphofructokinase; Provisi 1e-143
cd00363338 cd00363, PFK, Phosphofructokinase, a key regulator 1e-133
PTZ002871419 PTZ00287, PTZ00287, 6-phosphofructokinase; Provisi 2e-95
COG0205347 COG0205, PfkA, 6-phosphofructokinase [Carbohydrate 2e-85
PTZ004681328 PTZ00468, PTZ00468, phosphofructokinase family pro 1e-48
PRK03202320 PRK03202, PRK03202, 6-phosphofructokinase; Provisi 6e-31
TIGR02483324 TIGR02483, PFK_mixed, phosphofructokinase 1e-26
TIGR02482301 TIGR02482, PFKA_ATP, 6-phosphofructokinase 3e-23
pfam00365279 pfam00365, PFK, Phosphofructokinase 4e-22
cd00763317 cd00763, Bacterial_PFK, Phosphofructokinase, a key 2e-21
PTZ00286459 PTZ00286, PTZ00286, 6-phospho-1-fructokinase; Prov 2e-17
PRK06830443 PRK06830, PRK06830, diphosphate--fructose-6-phosph 5e-14
PRK14071360 PRK14071, PRK14071, 6-phosphofructokinase; Provisi 4e-12
PLN02884411 PLN02884, PLN02884, 6-phosphofructokinase 1e-11
PLN02564484 PLN02564, PLN02564, 6-phosphofructokinase 4e-10
PRK14072416 PRK14072, PRK14072, 6-phosphofructokinase; Provisi 5e-09
TIGR02478 746 TIGR02478, 6PF1K_euk, 6-phosphofructokinase, eukar 4e-07
PRK06555403 PRK06555, PRK06555, pyrophosphate--fructose-6-phos 7e-07
cd00764 762 cd00764, Eukaryotic_PFK, Phosphofructokinase, a ke 1e-05
TIGR02478746 TIGR02478, 6PF1K_euk, 6-phosphofructokinase, eukar 4e-04
>gnl|CDD|215140 PLN02251, PLN02251, pyrophosphate-dependent phosphofructokinase Back     alignment and domain information 
 Score = 1131 bits (2927), Expect = 0.0
 Identities = 458/548 (83%), Positives = 489/548 (89%), Gaps = 1/548 (0%)

Query: 14  PGRLASVYSELQTSRLNVSLPLPSVLKKTFNVVDGAPSSASGNPEEIKKLFPKLFGQPSA 73
            GR ASVYSE+Q+SR++ +LPLPSVLK  F +VDG PSSA+GNPEEI KLFP LFGQPS 
Sbjct: 22  SGRDASVYSEVQSSRIDHALPLPSVLKGPFKIVDGPPSSAAGNPEEIAKLFPNLFGQPSV 81

Query: 74  RLVECDPKACSMENKSLKIGVVLSGGQAPGGHNVISGIFDYLQERTNGSKLYGFKGGPAG 133
            LV     A S  ++ LKIGVVLSGGQAPGGHNVISGIFDYLQE   GS LYGFKGGPAG
Sbjct: 82  MLVPSQADALS-SDQKLKIGVVLSGGQAPGGHNVISGIFDYLQEHAKGSVLYGFKGGPAG 140

Query: 134 IMKCKYVELSTEYIYPYRNQGGFDMICSGRDKIETPEQFKQAEETAKKLDLDGLVVIGGD 193
           IMKCKYVEL+ E+IYPYRNQGGFDMICSGRDKIETPEQFKQAEETA KLDLDGLVVIGGD
Sbjct: 141 IMKCKYVELTAEFIYPYRNQGGFDMICSGRDKIETPEQFKQAEETATKLDLDGLVVIGGD 200

Query: 194 DSNTNACLLAENFRSKDMKTRVIGCPKTIDGDLKCKEVPTSFGFDTACKIFSEMIGNVMT 253
           DSNTNACLLAE FR+K++KTRVIGCPKTIDGDLK KEVPTSFGFDTACKI+SEMIGNVM 
Sbjct: 201 DSNTNACLLAEYFRAKNLKTRVIGCPKTIDGDLKSKEVPTSFGFDTACKIYSEMIGNVMI 260

Query: 254 DARSTGKYYHFVRLMGRAASHITLECALQTHPNITIIGEEVAAKKQTLKNVTDYITDIIC 313
           DARSTGKYYHFVRLMGRAASHITLECALQTHPNITIIGEEVAAKK TLKNVTDYI D+IC
Sbjct: 261 DARSTGKYYHFVRLMGRAASHITLECALQTHPNITIIGEEVAAKKLTLKNVTDYIVDVIC 320

Query: 314 KRSEAGYNYGVILIPEGLIDFIPEVQQLIAELNEILAHDGVDQDGAWKKKLKSQSQELFE 373
           KR+E GYNYGVILIPEGLIDFIPEVQ LIAELNEILAHD VD++G WKKKLK QS +LF+
Sbjct: 321 KRAELGYNYGVILIPEGLIDFIPEVQHLIAELNEILAHDVVDEEGHWKKKLKPQSLQLFD 380

Query: 374 LFPKAIQEQLLLERDPHGNVQVAKIETEKMLIQMVETELNKMKQKGAYKGQFNGQSHFFG 433
             P AIQEQL+LERDPHGNVQVAKIETEKMLIQMVETEL K KQ+G+YKG F GQSHFFG
Sbjct: 381 FLPHAIQEQLMLERDPHGNVQVAKIETEKMLIQMVETELEKRKQEGSYKGHFKGQSHFFG 440

Query: 434 YEGRCGLPTNFDANYCYALGYAAAALLHAGKTGLISSVGNLGEPVEEWTVGGTALTSLMD 493
           YEGRCGLPTNFDA YCYALGY A ALLH+GKTGLISSVGNL  PVEEWTVGGTALTSLMD
Sbjct: 441 YEGRCGLPTNFDATYCYALGYGAGALLHSGKTGLISSVGNLAAPVEEWTVGGTALTSLMD 500

Query: 494 VERRHGKFKPVIKKAMVELEGIPFKTFASLREDWTIKNLYVSPGPIQFVGPNANDINHTL 553
           VERRHGKFKPVIKKAMVELEG PFK FASLR++W +KN Y+SPGPIQF GP ++  NHTL
Sbjct: 501 VERRHGKFKPVIKKAMVELEGAPFKKFASLRDEWALKNRYISPGPIQFSGPGSDATNHTL 560

Query: 554 KLELGPPA 561
           KLELG  A
Sbjct: 561 KLELGAQA 568

Length = 568
>gnl|CDD|238390 cd00765, Pyrophosphate_PFK, Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate Back     alignment and domain information
>gnl|CDD|131530 TIGR02477, PFKA_PPi, diphosphate--fructose-6-phosphate 1-phosphotransferase Back     alignment and domain information
>gnl|CDD|235930 PRK07085, PRK07085, diphosphate--fructose-6-phosphate 1-phosphotransferase; Provisional Back     alignment and domain information
>gnl|CDD|185647 PTZ00468, PTZ00468, phosphofructokinase family protein; Provisional Back     alignment and domain information
>gnl|CDD|215543 PLN03028, PLN03028, pyrophosphate--fructose-6-phosphate 1-phosphotransferase; Provisional Back     alignment and domain information
>gnl|CDD|240345 PTZ00287, PTZ00287, 6-phosphofructokinase; Provisional Back     alignment and domain information
>gnl|CDD|238216 cd00363, PFK, Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate Back     alignment and domain information
>gnl|CDD|240345 PTZ00287, PTZ00287, 6-phosphofructokinase; Provisional Back     alignment and domain information
>gnl|CDD|223283 COG0205, PfkA, 6-phosphofructokinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|185647 PTZ00468, PTZ00468, phosphofructokinase family protein; Provisional Back     alignment and domain information
>gnl|CDD|235111 PRK03202, PRK03202, 6-phosphofructokinase; Provisional Back     alignment and domain information
>gnl|CDD|233887 TIGR02483, PFK_mixed, phosphofructokinase Back     alignment and domain information
>gnl|CDD|213713 TIGR02482, PFKA_ATP, 6-phosphofructokinase Back     alignment and domain information
>gnl|CDD|109425 pfam00365, PFK, Phosphofructokinase Back     alignment and domain information
>gnl|CDD|238388 cd00763, Bacterial_PFK, Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate Back     alignment and domain information
>gnl|CDD|185539 PTZ00286, PTZ00286, 6-phospho-1-fructokinase; Provisional Back     alignment and domain information
>gnl|CDD|235869 PRK06830, PRK06830, diphosphate--fructose-6-phosphate 1-phosphotransferase; Provisional Back     alignment and domain information
>gnl|CDD|184487 PRK14071, PRK14071, 6-phosphofructokinase; Provisional Back     alignment and domain information
>gnl|CDD|178472 PLN02884, PLN02884, 6-phosphofructokinase Back     alignment and domain information
>gnl|CDD|178178 PLN02564, PLN02564, 6-phosphofructokinase Back     alignment and domain information
>gnl|CDD|237600 PRK14072, PRK14072, 6-phosphofructokinase; Provisional Back     alignment and domain information
>gnl|CDD|233884 TIGR02478, 6PF1K_euk, 6-phosphofructokinase, eukaryotic type Back     alignment and domain information
>gnl|CDD|180620 PRK06555, PRK06555, pyrophosphate--fructose-6-phosphate 1-phosphotransferase; Validated Back     alignment and domain information
>gnl|CDD|238389 cd00764, Eukaryotic_PFK, Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate Back     alignment and domain information
>gnl|CDD|233884 TIGR02478, 6PF1K_euk, 6-phosphofructokinase, eukaryotic type Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 567
PLN02251568 pyrophosphate-dependent phosphofructokinase 100.0
cd00765550 Pyrophosphate_PFK Phosphofructokinase, a key regul 100.0
PLN03028610 pyrophosphate--fructose-6-phosphate 1-phosphotrans 100.0
PRK07085555 diphosphate--fructose-6-phosphate 1-phosphotransfe 100.0
TIGR02477539 PFKA_PPi diphosphate--fructose-6-phosphate 1-phosp 100.0
PTZ00468 1328 phosphofructokinase family protein; Provisional 100.0
PTZ002871419 6-phosphofructokinase; Provisional 100.0
PTZ00287 1419 6-phosphofructokinase; Provisional 100.0
PTZ004681328 phosphofructokinase family protein; Provisional 100.0
cd00363338 PFK Phosphofructokinase, a key regulatory enzyme i 100.0
PRK14072416 6-phosphofructokinase; Provisional 100.0
COG0205347 PfkA 6-phosphofructokinase [Carbohydrate transport 100.0
TIGR02483324 PFK_mixed phosphofructokinase. Members of this fam 100.0
PLN02564484 6-phosphofructokinase 100.0
PRK03202320 6-phosphofructokinase; Provisional 100.0
PTZ00286459 6-phospho-1-fructokinase; Provisional 100.0
PLN02884411 6-phosphofructokinase 100.0
TIGR02482301 PFKA_ATP 6-phosphofructokinase. 6-phosphofructokin 100.0
PRK14071360 6-phosphofructokinase; Provisional 100.0
PRK06830443 diphosphate--fructose-6-phosphate 1-phosphotransfe 100.0
cd00763317 Bacterial_PFK Phosphofructokinase, a key regulator 100.0
PRK06555403 pyrophosphate--fructose-6-phosphate 1-phosphotrans 100.0
TIGR02478 745 6PF1K_euk 6-phosphofructokinase, eukaryotic type. 100.0
cd00764 762 Eukaryotic_PFK Phosphofructokinase, a key regulato 100.0
PF00365282 PFK: Phosphofructokinase; InterPro: IPR000023 The 100.0
TIGR02478745 6PF1K_euk 6-phosphofructokinase, eukaryotic type. 100.0
cd00764762 Eukaryotic_PFK Phosphofructokinase, a key regulato 100.0
KOG2440666 consensus Pyrophosphate-dependent phosphofructo-1- 100.0
KOG2440 666 consensus Pyrophosphate-dependent phosphofructo-1- 100.0
cd01537264 PBP1_Repressors_Sugar_Binding_like Ligand-binding 88.31
PRK00561259 ppnK inorganic polyphosphate/ATP-NAD kinase; Provi 87.95
PRK04761246 ppnK inorganic polyphosphate/ATP-NAD kinase; Revie 87.94
COG3199355 Predicted inorganic polyphosphate/ATP-NAD kinase [ 87.07
PF00465366 Fe-ADH: Iron-containing alcohol dehydrogenase ; In 84.66
PF01513285 NAD_kinase: ATP-NAD kinase; InterPro: IPR002504 Me 84.15
PF13407257 Peripla_BP_4: Periplasmic binding protein domain; 83.07
PRK04885265 ppnK inorganic polyphosphate/ATP-NAD kinase; Provi 82.67
PRK14077287 pnk inorganic polyphosphate/ATP-NAD kinase; Provis 82.48
cd08180332 PDD 1,3-propanediol dehydrogenase (PPD) catalyzes 82.41
PLN02929301 NADH kinase 81.35
PLN02935508 Bifunctional NADH kinase/NAD(+) kinase 80.57
cd06321271 PBP1_ABC_sugar_binding_like_11 Periplasmic sugar-b 80.43
PRK14075256 pnk inorganic polyphosphate/ATP-NAD kinase; Provis 80.43
cd08551370 Fe-ADH iron-containing alcohol dehydrogenases (Fe- 80.03
>PLN02251 pyrophosphate-dependent phosphofructokinase Back     alignment and domain information 
Probab=100.00  E-value=2.5e-155  Score=1270.84  Aligned_cols=547  Identities=83%  Similarity=1.318  Sum_probs=530.8

Q ss_pred             CCCCCcccCCHhhhhhcCCCCCCccccccccceecCCCCCCCCChhHHHhhCCcccCCCeeEEecCCcccccCCCCCcEE
Q 042388           13 GPGRLASVYSELQTSRLNVSLPLPSVLKKTFNVVDGAPSSASGNPEEIKKLFPKLFGQPSARLVECDPKACSMENKSLKI   92 (567)
Q Consensus        13 ~~~~~~~~~s~l~~~r~~~~p~lp~~l~~~~~~~~~~~~~~~~~~~~i~~~fp~~~~~p~~~~~~~~~~~~~~~~~~~~I   92 (567)
                      ...++.+.+|+||++|+.|+|+||++|++++++.+++++.++.++++|+++|||||++|.++|+++.+ .......++||
T Consensus        21 ~~~~~~~~~s~~q~~r~~~~p~lp~~l~~~~~~~~~~~~~~~~~~~~i~~~fp~~~~~~~~~~~~~~~-~~~~~~~~~~I   99 (568)
T PLN02251         21 ASGRDASVYSEVQSSRIDHALPLPSVLKGPFKIVDGPPSSAAGNPEEIAKLFPNLFGQPSVMLVPSQA-DALSSDQKLKI   99 (568)
T ss_pred             hhhhhhhccCHHHHHHHhCCCCCChhhcCceEEEecCcccccCCHHHHHHhChHhhCCceEEEeeccC-ccccccccceE
Confidence            45667778999999999999999999999999999999999999999999999999999999998531 12223566899


Q ss_pred             EEEecCCCCchhhHHHHHHHHHHHHhcCCCEEEEEeCCcccccCCCEEEcCccccccccccCCcccccccCCCCCChHHH
Q 042388           93 GVVLSGGQAPGGHNVISGIFDYLQERTNGSKLYGFKGGPAGIMKCKYVELSTEYIYPYRNQGGFDMICSGRDKIETPEQF  172 (567)
Q Consensus        93 gIv~sGG~aPG~nnvI~gl~~~l~~~~~~~~v~Gf~~G~~GLl~~~~~eLt~~~v~~~~n~GG~~~LGS~R~k~~~~e~~  172 (567)
                      ||||||||||||||||+|++++++..+++++||||++||.||+++++++||++.++.|+|+|||++|||+|+++++++++
T Consensus       100 GIv~sGG~APG~nnvI~Gv~~~a~~~~~~~~vyG~~~G~~GLl~~~~v~Lt~~~v~~~~n~GG~dlLGS~R~k~~~~e~~  179 (568)
T PLN02251        100 GVVLSGGQAPGGHNVISGIFDYLQEHAKGSVLYGFKGGPAGIMKCKYVELTAEFIYPYRNQGGFDMICSGRDKIETPEQF  179 (568)
T ss_pred             EEECcCCCchhHHHHHHHHHHHHHHhCCCCEEEEEccChHHhcCCCeEECCHHHhhhhhhCCCceEecccCCCcCCHHHH
Confidence            99999999999999999999999888899999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHcCCCEEEEecCchhHHHHHHHHHHHhcCCCCccEEEecccCcCCCCCCCCCCCCChHhHHHHHHHHHHHHH
Q 042388          173 KQAEETAKKLDLDGLVVIGGDDSNTNACLLAENFRSKDMKTRVIGCPKTIDGDLKCKEVPTSFGFDTACKIFSEMIGNVM  252 (567)
Q Consensus       173 ~~~~~~l~~~~id~LViIGGddS~t~A~~Lae~~~~~g~~i~VIgVPKTIDNDL~~~~ie~S~GFdTA~k~~ae~I~ni~  252 (567)
                      ++++++|++++||+||+|||||||++|+.|+|||+++|++|+||||||||||||+++|+|+|||||||+++++++|+||+
T Consensus       180 ~~~~~~l~~l~Id~LViIGGddS~~~A~~Lae~~~~~g~~i~VIGVPKTIDNDL~~td~e~s~GFdTA~k~~a~~I~ni~  259 (568)
T PLN02251        180 KQAEETATKLDLDGLVVIGGDDSNTNACLLAEYFRAKNLKTRVIGCPKTIDGDLKSKEVPTSFGFDTACKIYSEMIGNVM  259 (568)
T ss_pred             HHHHHHHHHcCCCEEEEeCCchHHHHHHHHHHHHHhcCCCeeEEEeCceEeCCCCCCcCCCCCCHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhcCCeeEEEEecCCCCcHHHHHhhhhcCCcEEEECCcchhhhcchHhHHHHHHHHHHHHHHcCCCeEEEEEeCCCC
Q 042388          253 TDARSTGKYYHFVRLMGRAASHITLECALQTHPNITIIGEEVAAKKQTLKNVTDYITDIICKRSEAGYNYGVILIPEGLI  332 (567)
Q Consensus       253 ~da~S~~k~~~fVevMGR~ag~LAL~~aLat~pnivlIpEe~~~~~~tL~~iv~~i~d~I~~R~~~gk~~gvIli~EGl~  332 (567)
                      +||.|++|||||||+|||+||||||+||||||||+|||||++++++++|++|++.||+.|++|+.+|++|||||||||++
T Consensus       260 ~da~S~~k~~~~VevMGR~aG~LAL~~aLat~pniilIpEe~~~~~~~L~~I~~~I~~~I~~R~~~gk~~gvIlVsEGli  339 (568)
T PLN02251        260 IDARSTGKYYHFVRLMGRAASHITLECALQTHPNITIIGEEVAAKKLTLKNVTDYIVDVICKRAELGYNYGVILIPEGLI  339 (568)
T ss_pred             HHHHhhCCEEEEEEeCCCchHHHHHHHHHhhCCCEEEecCccccccCCHHHHHHHHHHHHHHHHHcCCCcEEEEEeCCch
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCchHHHHHHHHHHHhhhcCCcCCCcchhhhcchhhHHHHhhchHHHHHHhhhcCCCCCCcccchhhhHHHHHHHHHHHH
Q 042388          333 DFIPEVQQLIAELNEILAHDGVDQDGAWKKKLKSQSQELFELFPKAIQEQLLLERDPHGNVQVAKIETEKMLIQMVETEL  412 (567)
Q Consensus       333 ~~ipe~~~li~el~~~~~~~~~~~~g~~~~~ls~~~~~lf~~lp~~i~~ql~~~rD~~Gn~~ls~i~te~lL~~lV~~~L  412 (567)
                      +||||++.||+|+|++++++..++++.+.++||+|++++|++||.+||+||+.+||+|||+|+++|+||++|++||+++|
T Consensus       340 e~ipe~~~li~el~~~l~~~~~~~~~~~~~~ls~~~~~lf~~lP~~i~~qll~~rD~~G~~qls~Iete~lL~~lV~~~L  419 (568)
T PLN02251        340 DFIPEVQHLIAELNEILAHDVVDEEGHWKKKLKPQSLQLFDFLPHAIQEQLMLERDPHGNVQVAKIETEKMLIQMVETEL  419 (568)
T ss_pred             hhCchHHHHHHHHHHHhhhcccccchhhhhhCCHHHHHHHHhCcHHHHHHhccccCCCCCeeecccHHHHHHHHHHHHHH
Confidence            99999999999999999998888889999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhhhcCCcCcccccceecCcccccCCCCCHHHHHHHHHHHHHHHHHHHcCCCceEEEEecCCCCccceEEeccchHhHH
Q 042388          413 NKMKQKGAYKGQFNGQSHFFGYEGRCGLPTNFDANYCYALGYAAAALLHAGKTGLISSVGNLGEPVEEWTVGGTALTSLM  492 (567)
Q Consensus       413 ~~r~~~~~y~~~f~~~~~~~Gy~~R~~~PS~fD~~~a~~lG~~Av~li~~g~tG~mv~i~~l~~~~~~w~~~~vPL~~~~  492 (567)
                      ++|+.+|+|+++|++++|+|||+|||+.||+||++|||+||+.|+.++.+|+||||++|+|++.++++|+++++||++||
T Consensus       420 ~~rk~~~~~~~~f~~~~h~~GYe~Rca~PS~fD~~yay~LG~~A~~li~~G~tGyM~~I~nl~~~~~~w~~~~vpl~~~m  499 (568)
T PLN02251        420 EKRKQEGSYKGHFKGQSHFFGYEGRCGLPTNFDATYCYALGYGAGALLHSGKTGLISSVGNLAAPVEEWTVGGTALTSLM  499 (568)
T ss_pred             hhhccccccccccceeEEecCchhhccCCCHHHHHHHHHHHHHHHHHHHcCCCCEEEEEEcCCCCcceeEEcCccHHHHh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhcCCcccccchhhhccCCchhHHHHHhhccccccCceeCCccccccCCCCCCCcceeEecCCCc
Q 042388          493 DVERRHGKFKPVIKKAMVELEGIPFKTFASLREDWTIKNLYVSPGPIQFVGPNANDINHTLKLELGPP  560 (567)
Q Consensus       493 ~~e~~~g~~~p~i~~~~v~l~~~~f~~~~~~r~~w~~~d~y~~pGpiq~~g~~~~~~~~tl~~e~~~~  560 (567)
                      |+||++|+.+|||+|++|||+|++|++|+++|++|+++|+||+||||||+||.+|++++||.||++.+
T Consensus       500 n~e~~~~~~~pvi~k~~v~l~g~~f~~~~~~r~~w~~~d~y~~pgpiQ~~g~~~~~~~~tl~~e~~~~  567 (568)
T PLN02251        500 DVERRHGKFKPVIKKAMVELEGAPFKKFASLRDEWALKNRYISPGPIQFSGPGSDATNHTLKLELGAQ  567 (568)
T ss_pred             hhhhhCCCcCccccccccCCCCHHHHHHHHHHHHhhhcCcCcCCCCccccCcccCCCceEEEecccCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999765

>cd00765 Pyrophosphate_PFK Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate Back     alignment and domain information
>PLN03028 pyrophosphate--fructose-6-phosphate 1-phosphotransferase; Provisional Back     alignment and domain information
>PRK07085 diphosphate--fructose-6-phosphate 1-phosphotransferase; Provisional Back     alignment and domain information
>TIGR02477 PFKA_PPi diphosphate--fructose-6-phosphate 1-phosphotransferase Back     alignment and domain information
>PTZ00468 phosphofructokinase family protein; Provisional Back     alignment and domain information
>PTZ00287 6-phosphofructokinase; Provisional Back     alignment and domain information
>PTZ00287 6-phosphofructokinase; Provisional Back     alignment and domain information
>PTZ00468 phosphofructokinase family protein; Provisional Back     alignment and domain information
>cd00363 PFK Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate Back     alignment and domain information
>PRK14072 6-phosphofructokinase; Provisional Back     alignment and domain information
>COG0205 PfkA 6-phosphofructokinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR02483 PFK_mixed phosphofructokinase Back     alignment and domain information
>PLN02564 6-phosphofructokinase Back     alignment and domain information
>PRK03202 6-phosphofructokinase; Provisional Back     alignment and domain information
>PTZ00286 6-phospho-1-fructokinase; Provisional Back     alignment and domain information
>PLN02884 6-phosphofructokinase Back     alignment and domain information
>TIGR02482 PFKA_ATP 6-phosphofructokinase Back     alignment and domain information
>PRK14071 6-phosphofructokinase; Provisional Back     alignment and domain information
>PRK06830 diphosphate--fructose-6-phosphate 1-phosphotransferase; Provisional Back     alignment and domain information
>cd00763 Bacterial_PFK Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate Back     alignment and domain information
>PRK06555 pyrophosphate--fructose-6-phosphate 1-phosphotransferase; Validated Back     alignment and domain information
>TIGR02478 6PF1K_euk 6-phosphofructokinase, eukaryotic type Back     alignment and domain information
>cd00764 Eukaryotic_PFK Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate Back     alignment and domain information
>PF00365 PFK: Phosphofructokinase; InterPro: IPR000023 The enzyme-catalysed transfer of a phosphoryl group from ATP is an important reaction in a wide variety of biological processes [] Back     alignment and domain information
>TIGR02478 6PF1K_euk 6-phosphofructokinase, eukaryotic type Back     alignment and domain information
>cd00764 Eukaryotic_PFK Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate Back     alignment and domain information
>KOG2440 consensus Pyrophosphate-dependent phosphofructo-1-kinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG2440 consensus Pyrophosphate-dependent phosphofructo-1-kinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd01537 PBP1_Repressors_Sugar_Binding_like Ligand-binding domain of the LacI-GalR family of transcription regulators and the sugar-binding domain of ABC-type transport systems Back     alignment and domain information
>PRK00561 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>PRK04761 ppnK inorganic polyphosphate/ATP-NAD kinase; Reviewed Back     alignment and domain information
>COG3199 Predicted inorganic polyphosphate/ATP-NAD kinase [General function prediction only] Back     alignment and domain information
>PF00465 Fe-ADH: Iron-containing alcohol dehydrogenase ; InterPro: IPR001670 Alcohol dehydrogenase (1 Back     alignment and domain information
>PF01513 NAD_kinase: ATP-NAD kinase; InterPro: IPR002504 Members of this family are ATP-NAD kinases 2 Back     alignment and domain information
>PF13407 Peripla_BP_4: Periplasmic binding protein domain; PDB: 3BRS_B 3GBP_A 3GA5_A 1GCG_A 1GCA_A 3H75_A 3D02_A 3L49_B 3EJW_B 3T95_A Back     alignment and domain information
>PRK04885 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>PRK14077 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>cd08180 PDD 1,3-propanediol dehydrogenase (PPD) catalyzes the reduction of 3-hydroxypropionaldehyde (3-HPA) to 1,3-propanediol in glycerol metabolism Back     alignment and domain information
>PLN02929 NADH kinase Back     alignment and domain information
>PLN02935 Bifunctional NADH kinase/NAD(+) kinase Back     alignment and domain information
>cd06321 PBP1_ABC_sugar_binding_like_11 Periplasmic sugar-binding domain of uncharacterized ABC-type transport systems Back     alignment and domain information
>PRK14075 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>cd08551 Fe-ADH iron-containing alcohol dehydrogenases (Fe-ADH)-like Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query567
1kzh_A555 Structure Of A Pyrophosphate-dependent Phosphofruct 1e-134
3pfk_A319 Phosphofructokinase. Structure And Control Length = 4e-07
1zxx_A319 The Crystal Structure Of Phosphofructokinase From L 4e-07
6pfk_A319 Phosphofructokinase, Inhibited T-State Length = 319 5e-07
1pfk_A320 Crystal Structure Of The Complex Of Phosphofructoki 6e-07
1mto_A319 Crystal Structure Of A Phosphofructokinase Mutant F 1e-06
2hig_A487 Crystal Structure Of Phosphofructokinase Apoenzyme 4e-06
4a3s_A319 Crystal Structure Of Pfk From Bacillus Subtilis Len 1e-04
>pdb|1KZH|A Chain A, Structure Of A Pyrophosphate-dependent Phosphofructokinase From The Lyme Disease Spirochete Borrelia Burgdorferi Length = 555 Back     alignment and structure 
Iteration: 1

 Score =  476 bits (1226), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 246/539 (45%), Positives = 338/539 (62%), Gaps = 18/539 (3%)
Query: 35  LPSVLKKTFN---VVDGAPSSASGNPEEIKKLFPKLFGQPSARLVECDPKACSMENKSLK 91
           LP++LKK FN   +V G  + A  + + +K+ F   +G P     E +       +K+L 
Sbjct: 17  LPNILKKDFNNISLVYGENTEAIQDRQALKEFFKNTYGLPIISFTEGESSLSF--SKALN 74
Query: 92  IGVVLSGGQAPGGHNVISGIFDYLQERTNGSKLYGFKGGPAGIMKCKYVELSTEYIYPYR 151
           IG++LSGG APGGHNVISG+FD +++    SKL+GFKGGP G+++   +EL+   I  YR
Sbjct: 75  IGIILSGGPAPGGHNVISGVFDAIKKFNPNSKLFGFKGGPLGLLENDKIELTESLINSYR 134
Query: 152 NQGGFDMICSGRDKIETPEQFKQAEETAKKXXXXXXXXXXXXXSNTNACLLAENFRSKDM 211
           N GGFD++ SGR KIET E + +A   AK+             SNTNA +LAE F+    
Sbjct: 135 NTGGFDIVSSGRTKIETEEHYNKALFVAKENNLNAIIIIGGDDSNTNAAILAEYFKKNGE 194
Query: 212 KTRVIGCPKTIDGDLKCKEVPTSFGFDTACKIFSEMIGNVMTDARSTGKYYHFVRLMGRA 271
             +VIG PKTID DL+   +  SFGFD+A KI+SE+IGN+  DA ST KY+HFV+LMGR+
Sbjct: 195 NIQVIGVPKTIDADLRNDHIEISFGFDSATKIYSELIGNLCRDAMSTKKYWHFVKLMGRS 254
Query: 272 ASHITLECALQTHPNITIIGEEVAAKKQTLKNVTDYITDIICKRSEAGYNYGVILIPEGL 331
           ASH+ LECAL+THPNI I+ EEV AKK+TL  + D +  +I KRS  G N+GV+++PEGL
Sbjct: 255 ASHVALECALKTHPNICIVSEEVLAKKKTLSEIIDEMVSVILKRSLNGDNFGVVIVPEGL 314
Query: 332 IDFIPEVQQLIAELNEILAHDGVDQDG--------AWKKKLKSQSQELFELFPKAIQEQL 383
           I+FIPEV+ L+ EL +I   +  +  G         +  KL    + ++   P  IQ +L
Sbjct: 315 IEFIPEVKSLMLELCDIFDKNEGEFKGLNIEKMKEIFVAKLSDYMKGVYLSLPLFIQFEL 374
Query: 384 ---LLERDPHGNVQVAKIETEKMLIQMVETELNKMKQKGAYKGQFNGQSHFFGYEGRCGL 440
              +LERDPHGN  V+++ TEK+ I+M+++ LN MK++G YKG F    HFFGYEGR   
Sbjct: 375 IKSILERDPHGNFNVSRVPTEKLFIEMIQSRLNDMKKRGEYKGSFTPVDHFFGYEGRSAF 434
Query: 441 PTNFDXXXXXXXXXXXXXXXXXGKTGLISSVGNLGEPVEEWTVGGTALTSLMDVERRHGK 500
           P+NFD                 G TG +S + NL     +W  GG  LT LM++E R+G+
Sbjct: 435 PSNFDSDYCYSLGYNAVVLILNGLTGYMSCIKNLNLKPTDWIAGGVPLTMLMNMEERYGE 494
Query: 501 FKPVIKKAMVELEGIPFKTFASLREDWTIKNLYVSPGPIQFVGPN--ANDINHTLKLEL 557
            KPVIKKA+V+LEG PFK F   R+ W + NLY+ PGP+Q+ G +   ++I  TLKLEL
Sbjct: 495 KKPVIKKALVDLEGRPFKEFVKNRDKWALNNLYLYPGPVQYFGSSEIVDEITETLKLEL 553
>pdb|3PFK|A Chain A, Phosphofructokinase. Structure And Control Length = 319 Back     alignment and structure
>pdb|1ZXX|A Chain A, The Crystal Structure Of Phosphofructokinase From Lactobacillus Delbrueckii Length = 319 Back     alignment and structure
>pdb|6PFK|A Chain A, Phosphofructokinase, Inhibited T-State Length = 319 Back     alignment and structure
>pdb|1PFK|A Chain A, Crystal Structure Of The Complex Of Phosphofructokinase From Escherichia Coli With Its Reaction Products Length = 320 Back     alignment and structure
>pdb|1MTO|A Chain A, Crystal Structure Of A Phosphofructokinase Mutant From Bacillus Stearothermophilus Bound With Fructose-6-Phosphate Length = 319 Back     alignment and structure
>pdb|2HIG|A Chain A, Crystal Structure Of Phosphofructokinase Apoenzyme From Trypanosoma Brucei. Length = 487 Back     alignment and structure
>pdb|4A3S|A Chain A, Crystal Structure Of Pfk From Bacillus Subtilis Length = 319 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query567
2f48_A555 Diphosphate--fructose-6-phosphate 1-phosphotransf; 0.0
2hig_A487 6-phospho-1-fructokinase; transferase; 2.40A {Tryp 2e-36
3hno_A419 Pyrophosphate-dependent phosphofructokinase; struc 8e-34
1pfk_A320 Phosphofructokinase; transferase(phosphotransferas 1e-31
4a3s_A319 6-phosphofructokinase; transferase, glycolysis, de 2e-30
1zxx_A319 6-phosphofructokinase; allosteric regulation, lact 3e-30
3opy_A 989 6-phosphofructo-1-kinase alpha-subunit; ATP bindin 5e-25
3opy_A989 6-phosphofructo-1-kinase alpha-subunit; ATP bindin 6e-24
3o8l_A762 6-phosphofructokinase, muscle type; transferase; H 3e-24
3o8l_A 762 6-phosphofructokinase, muscle type; transferase; H 9e-23
3o8o_A 787 6-phosphofructokinase subunit alpha; transferase; 5e-24
3o8o_A787 6-phosphofructokinase subunit alpha; transferase; 5e-24
3o8o_B766 6-phosphofructokinase subunit beta; transferase; H 1e-23
3o8o_B 766 6-phosphofructokinase subunit beta; transferase; H 3e-22
3opy_B 941 6-phosphofructo-1-kinase beta-subunit; ATP binding 2e-23
3opy_B941 6-phosphofructo-1-kinase beta-subunit; ATP binding 5e-23
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-15
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-04
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-04
>2f48_A Diphosphate--fructose-6-phosphate 1-phosphotransf; phosphotransfer, transferase; HET: FBP; 2.11A {Borrelia burgdorferi} SCOP: c.89.1.1 PDB: 1kzh_A* Length = 555 Back     alignment and structure
 Score =  688 bits (1776), Expect = 0.0
 Identities = 261/553 (47%), Positives = 362/553 (65%), Gaps = 18/553 (3%)

Query: 22  SELQTSRLNVSLPLPSVLKKTFNVV---DGAPSSASGNPEEIKKLFPKLFGQPSARLVEC 78
           S  +  R      LP++LKK FN +    G  + A  + + +K+ F   +G P     E 
Sbjct: 4   SLFKQERQKYIPKLPNILKKDFNNISLVYGENTEAIQDRQALKEFFKNTYGLPIISFTEG 63

Query: 79  DPKACSMENKSLKIGVVLSGGQAPGGHNVISGIFDYLQERTNGSKLYGFKGGPAGIMKCK 138
           +       +K+L IG++LSGG APGGHNVISG+FD +++    SKL+GFKGGP G+++  
Sbjct: 64  ESSL--SFSKALNIGIILSGGPAPGGHNVISGVFDAIKKFNPNSKLFGFKGGPLGLLEND 121

Query: 139 YVELSTEYIYPYRNQGGFDMICSGRDKIETPEQFKQAEETAKKLDLDGLVVIGGDDSNTN 198
            +EL+   I  YRN GGFD++ SGR KIET E + +A   AK+ +L+ +++IGGDDSNTN
Sbjct: 122 KIELTESLINSYRNTGGFDIVSSGRTKIETEEHYNKALFVAKENNLNAIIIIGGDDSNTN 181

Query: 199 ACLLAENFRSKDMKTRVIGCPKTIDGDLKCKEVPTSFGFDTACKIFSEMIGNVMTDARST 258
           A +LAE F+      +VIG PKTID DL+   +  SFGFD+A KI+SE+IGN+  DA ST
Sbjct: 182 AAILAEYFKKNGENIQVIGVPKTIDADLRNDHIEISFGFDSATKIYSELIGNLCRDAMST 241

Query: 259 GKYYHFVRLMGRAASHITLECALQTHPNITIIGEEVAAKKQTLKNVTDYITDIICKRSEA 318
            KY+HFV+LMGR+ASH+ LECAL+THPNI I+ EEV AKK+TL  + D +  +I KRS  
Sbjct: 242 KKYWHFVKLMGRSASHVALECALKTHPNICIVSEEVLAKKKTLSEIIDEMVSVILKRSLN 301

Query: 319 GYNYGVILIPEGLIDFIPEVQQLIAELNEILAHDGVDQDG--------AWKKKLKSQSQE 370
           G N+GV+++PEGLI+FIPEV+ L+ EL +I   +  +  G         +  KL    + 
Sbjct: 302 GDNFGVVIVPEGLIEFIPEVKSLMLELCDIFDKNEGEFKGLNIEKMKEIFVAKLSDYMKG 361

Query: 371 LFELFPKAIQEQL---LLERDPHGNVQVAKIETEKMLIQMVETELNKMKQKGAYKGQFNG 427
           ++   P  IQ +L   +LERDPHGN  V+++ TEK+ I+M+++ LN MK++G YKG F  
Sbjct: 362 VYLSLPLFIQFELIKSILERDPHGNFNVSRVPTEKLFIEMIQSRLNDMKKRGEYKGSFTP 421

Query: 428 QSHFFGYEGRCGLPTNFDANYCYALGYAAAALLHAGKTGLISSVGNLGEPVEEWTVGGTA 487
             HFFGYEGR   P+NFD++YCY+LGY A  L+  G TG +S + NL     +W  GG  
Sbjct: 422 VDHFFGYEGRSAFPSNFDSDYCYSLGYNAVVLILNGLTGYMSCIKNLNLKPTDWIAGGVP 481

Query: 488 LTSLMDVERRHGKFKPVIKKAMVELEGIPFKTFASLREDWTIKNLYVSPGPIQFVGP--N 545
           LT LM++E R+G+ KPVIKKA+V+LEG PFK F   R+ W + NLY+ PGP+Q+ G    
Sbjct: 482 LTMLMNMEERYGEKKPVIKKALVDLEGRPFKEFVKNRDKWALNNLYLYPGPVQYFGSSEI 541

Query: 546 ANDINHTLKLELG 558
            ++I  TLKLEL 
Sbjct: 542 VDEITETLKLELF 554
>2hig_A 6-phospho-1-fructokinase; transferase; 2.40A {Trypanosoma brucei} PDB: 3f5m_A* Length = 487 Back     alignment and structure
>3hno_A Pyrophosphate-dependent phosphofructokinase; structural genomics, PSI-2, protein structure initiative; 2.00A {Nitrosospira multiformis atcc 25196} PDB: 3k2q_A Length = 419 Back     alignment and structure
>1pfk_A Phosphofructokinase; transferase(phosphotransferase); HET: FBP ADP; 2.40A {Escherichia coli} SCOP: c.89.1.1 PDB: 2pfk_A Length = 320 Back     alignment and structure
>4a3s_A 6-phosphofructokinase; transferase, glycolysis, degradosome; 2.30A {Bacillus subtilis} PDB: 6pfk_A 3u39_A 3pfk_A 4pfk_A* 1mto_A* Length = 319 Back     alignment and structure
>1zxx_A 6-phosphofructokinase; allosteric regulation, lactobacillus BU transferase; 1.85A {Lactobacillus delbrueckii subsp} Length = 319 Back     alignment and structure
>3opy_A 6-phosphofructo-1-kinase alpha-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris} Length = 989 Back     alignment and structure
>3opy_A 6-phosphofructo-1-kinase alpha-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris} Length = 989 Back     alignment and structure
>3o8l_A 6-phosphofructokinase, muscle type; transferase; HET: ATP ADP; 3.20A {Oryctolagus cuniculus} PDB: 3o8n_A* Length = 762 Back     alignment and structure
>3o8l_A 6-phosphofructokinase, muscle type; transferase; HET: ATP ADP; 3.20A {Oryctolagus cuniculus} PDB: 3o8n_A* Length = 762 Back     alignment and structure
>3o8o_A 6-phosphofructokinase subunit alpha; transferase; HET: F6P FDP; 2.90A {Saccharomyces cerevisiae} Length = 787 Back     alignment and structure
>3o8o_A 6-phosphofructokinase subunit alpha; transferase; HET: F6P FDP; 2.90A {Saccharomyces cerevisiae} Length = 787 Back     alignment and structure
>3o8o_B 6-phosphofructokinase subunit beta; transferase; HET: F6P FDP; 2.90A {Saccharomyces cerevisiae} Length = 766 Back     alignment and structure
>3o8o_B 6-phosphofructokinase subunit beta; transferase; HET: F6P FDP; 2.90A {Saccharomyces cerevisiae} Length = 766 Back     alignment and structure
>3opy_B 6-phosphofructo-1-kinase beta-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris} Length = 941 Back     alignment and structure
>3opy_B 6-phosphofructo-1-kinase beta-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris} Length = 941 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query567
2f48_A555 Diphosphate--fructose-6-phosphate 1-phosphotransf; 100.0
3hno_A419 Pyrophosphate-dependent phosphofructokinase; struc 100.0
1pfk_A320 Phosphofructokinase; transferase(phosphotransferas 100.0
1zxx_A319 6-phosphofructokinase; allosteric regulation, lact 100.0
2hig_A487 6-phospho-1-fructokinase; transferase; 2.40A {Tryp 100.0
4a3s_A319 6-phosphofructokinase; transferase, glycolysis, de 100.0
3o8l_A 762 6-phosphofructokinase, muscle type; transferase; H 100.0
3o8o_B 766 6-phosphofructokinase subunit beta; transferase; H 100.0
3o8o_A 787 6-phosphofructokinase subunit alpha; transferase; 100.0
3o8l_A762 6-phosphofructokinase, muscle type; transferase; H 100.0
3opy_B 941 6-phosphofructo-1-kinase beta-subunit; ATP binding 100.0
3opy_A 989 6-phosphofructo-1-kinase alpha-subunit; ATP bindin 100.0
3o8o_A787 6-phosphofructokinase subunit alpha; transferase; 100.0
3opy_B941 6-phosphofructo-1-kinase beta-subunit; ATP binding 100.0
3o8o_B766 6-phosphofructokinase subunit beta; transferase; H 100.0
3opy_A989 6-phosphofructo-1-kinase alpha-subunit; ATP bindin 100.0
3m9w_A313 D-xylose-binding periplasmic protein; xylose bindi 88.94
2i2c_A272 Probable inorganic polyphosphate/ATP-NAD kinase 1; 85.6
3l49_A291 ABC sugar (ribose) transporter, periplasmic substr 82.74
3g1w_A305 Sugar ABC transporter; sugar-binding protein, baci 81.86
>2f48_A Diphosphate--fructose-6-phosphate 1-phosphotransf; phosphotransfer, transferase; HET: FBP; 2.11A {Borrelia burgdorferi} SCOP: c.89.1.1 PDB: 1kzh_A* Back     alignment and structure
Probab=100.00  E-value=8e-140  Score=1153.51  Aligned_cols=536  Identities=48%  Similarity=0.862  Sum_probs=512.0

Q ss_pred             cCCHhhhhhcCCCCCCccccccc---cceecCCCCCCCCChhHHHhhCCcccCCCeeEEecCCcccccCCCCCcEEEEEe
Q 042388           20 VYSELQTSRLNVSLPLPSVLKKT---FNVVDGAPSSASGNPEEIKKLFPKLFGQPSARLVECDPKACSMENKSLKIGVVL   96 (567)
Q Consensus        20 ~~s~l~~~r~~~~p~lp~~l~~~---~~~~~~~~~~~~~~~~~i~~~fp~~~~~p~~~~~~~~~~~~~~~~~~~~IgIv~   96 (567)
                      ++|+||++|++|+|+||++|++.   +++++++++++..++++|+++|||||++|+++|+++..  .....+++||||++
T Consensus         2 ~~s~l~~~r~~~~p~lp~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~fp~~~~~p~~~~~~~~~--~~~~~~~~~igIlt   79 (555)
T 2f48_A            2 NTSLFKQERQKYIPKLPNILKKDFNNISLVYGENTEAIQDRQALKEFFKNTYGLPIISFTEGES--SLSFSKALNIGIIL   79 (555)
T ss_dssp             --CHHHHHHTTCCCCCCGGGGSCGGGEEEEECCCCCCSSCHHHHHHHTTTTTTCCCEEEEESCC--CCSCCSCCEEEEEE
T ss_pred             CCCHHHHhhhcCCCCCCHHHhCCccceeeecCCcccCccCHHHHHHhCccccCCCcEEEecCCc--ccccCCCcEEEEEC
Confidence            68999999999999999999986   79999999999999999999999999999999998752  12467789999999


Q ss_pred             cCCCCchhhHHHHHHHHHHHHhcCCCEEEEEeCCcccccCCCEEEcCccccccccccCCcccccccCCCCCChHHHHHHH
Q 042388           97 SGGQAPGGHNVISGIFDYLQERTNGSKLYGFKGGPAGIMKCKYVELSTEYIYPYRNQGGFDMICSGRDKIETPEQFKQAE  176 (567)
Q Consensus        97 sGG~aPG~nnvI~gl~~~l~~~~~~~~v~Gf~~G~~GLl~~~~~eLt~~~v~~~~n~GG~~~LGS~R~k~~~~e~~~~~~  176 (567)
                      ||||||||||||+|+++++++.+++++||||++||+||+++++++|+++.++.|+++|||++|||+|+++.+++++++++
T Consensus        80 sGGdaPGmNa~Ir~vv~~~~~~~~~~~v~Gi~~G~~GL~~~~~~~L~~~~v~~i~~~GGstiLGssR~~~~~~e~~~~~~  159 (555)
T 2f48_A           80 SGGPAPGGHNVISGVFDAIKKFNPNSKLFGFKGGPLGLLENDKIELTESLINSYRNTGGFDIVSSGRTKIETEEHYNKAL  159 (555)
T ss_dssp             BSSCCTTHHHHHHHHHHHHHHHCTTCEEEEETTTTHHHHTTCEEEECHHHHHHHTTCCSSTTTCCBCCCCCSHHHHHHHH
T ss_pred             cCCCcHhHHHHHHHHHHHHHHhcCCCEEEEEecChHHhcCCCEEECCHHHHHHHHhCCCCcCCCcCCCCCCCHHHHHHHH
Confidence            99999999999999999998888999999999999999999999999999999999999669999999998999999999


Q ss_pred             HHHHHcCCCEEEEecCchhHHHHHHHHHHHhcCCCCccEEEecccCcCCCCCCCCCCCCChHhHHHHHHHHHHHHHHHHh
Q 042388          177 ETAKKLDLDGLVVIGGDDSNTNACLLAENFRSKDMKTRVIGCPKTIDGDLKCKEVPTSFGFDTACKIFSEMIGNVMTDAR  256 (567)
Q Consensus       177 ~~l~~~~id~LViIGGddS~t~A~~Lae~~~~~g~~i~VIgVPKTIDNDL~~~~ie~S~GFdTA~k~~ae~I~ni~~da~  256 (567)
                      ++|++++||+||+||||||+++|+.|++++++++++++||||||||||||+++.+|+|||||||+++++++|++|++||.
T Consensus       160 ~~l~~~~Id~LvvIGGdgS~~~A~~L~e~~~~~~~~i~vIGiPkTIDNDl~~t~id~tiGFdTA~~~~~~aId~i~~da~  239 (555)
T 2f48_A          160 FVAKENNLNAIIIIGGDDSNTNAAILAEYFKKNGENIQVIGVPKTIDADLRNDHIEISFGFDSATKIYSELIGNLCRDAM  239 (555)
T ss_dssp             HHHHHTTCSEEEEEESHHHHHHHHHHHHHHHHTTCCCEEEEEEEETTCCCCCSSCCCCEEHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHcCCCEEEEeCCCcHHHHHHHHHHHHHHhCCCCcEEEeccccCCCCCCCcCCCCCChhHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999888999999999999999999999999


Q ss_pred             hcCCeeEEEEecCCCCcHHHHHhhhhcCCcEEEECCcchhhhcchHhHHHHHHHHHHHHHHcCCCeEEEEEeCCCCCCch
Q 042388          257 STGKYYHFVRLMGRAASHITLECALQTHPNITIIGEEVAAKKQTLKNVTDYITDIICKRSEAGYNYGVILIPEGLIDFIP  336 (567)
Q Consensus       257 S~~k~~~fVevMGR~ag~LAL~~aLat~pnivlIpEe~~~~~~tL~~iv~~i~d~I~~R~~~gk~~gvIli~EGl~~~ip  336 (567)
                      |++++|||||||||+||||||+||||++||+|||||++++++++|++++++||+.|++|+.+|++|+|||||||+++++|
T Consensus       240 s~~~rv~iVEvMGR~aG~lAl~a~LA~gad~ilIPE~~~~~~~~L~~~~~~i~~~i~~r~~~gk~~~IIvVaEG~~~~~~  319 (555)
T 2f48_A          240 STKKYWHFVKLMGRSASHVALECALKTHPNICIVSEEVLAKKKTLSEIIDEMVSVILKRSLNGDNFGVVIVPEGLIEFIP  319 (555)
T ss_dssp             HHCCCEEEEEECCTTSCHHHHHHHHHHCCSEECCHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCCCEEEEEETTGGGTSH
T ss_pred             HcCCcEEEEEeCCcCHHHHHHHHHhhcCCCEEEecCccccccCCHHHHHHHHHHHHHHHHHcCCCcEEEEEeCCCccccc
Confidence            99989999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhhhcCC-------cCCCcc-hhhhcchhhHHHHhhchHHHHHHhh---hcCCCCCCcccchhhhHHHHH
Q 042388          337 EVQQLIAELNEILAHDG-------VDQDGA-WKKKLKSQSQELFELFPKAIQEQLL---LERDPHGNVQVAKIETEKMLI  405 (567)
Q Consensus       337 e~~~li~el~~~~~~~~-------~~~~g~-~~~~ls~~~~~lf~~lp~~i~~ql~---~~rD~~Gn~~ls~i~te~lL~  405 (567)
                      +++.|++|+|++++++.       .+++|. +..+|++|++++|.+||..|++||+   .++|+|||+|+++|+||++|+
T Consensus       320 ~~~~li~el~~~l~~~~~~~~~l~~~~~~~~~~~~Ls~~~~~~~~~lp~~i~~~l~~~~~~~D~~Gn~~l~~i~t~~~L~  399 (555)
T 2f48_A          320 EVKSLMLELCDIFDKNEGEFKGLNIEKMKEIFVAKLSDYMKGVYLSLPLFIQFELIKSILERDPHGNFNVSRVPTEKLFI  399 (555)
T ss_dssp             HHHHHHHHHHHHHHHSHHHHTTCCHHHHHHHHHHHSCHHHHHHHHTSCHHHHHHHHHHHHTCCTTCCCCCTTSCHHHHHH
T ss_pred             hHHHHHHHHhhhhhcccccccccccccchhhhhhccchhhhhhhccchHHHHHHhhccccccCCCCCEeeccccHHHHHH
Confidence            99999999999987641       123344 5578999999999999999999987   789999999999999999999


Q ss_pred             HHHHHHHHHhhhcCCcCcccccceecCcccccCCCCCHHHHHHHHHHHHHHHHHHHcCCCceEEEEecCCCCccceEEec
Q 042388          406 QMVETELNKMKQKGAYKGQFNGQSHFFGYEGRCGLPTNFDANYCYALGYAAAALLHAGKTGLISSVGNLGEPVEEWTVGG  485 (567)
Q Consensus       406 ~lV~~~L~~r~~~~~y~~~f~~~~~~~Gy~~R~~~PS~fD~~~a~~lG~~Av~li~~g~tG~mv~i~~l~~~~~~w~~~~  485 (567)
                      ++|+++|++++.++.|+++|++|+|+|||+||||.||+|||.||++||+.|++++++|.||+|++++|++.++|+|++.+
T Consensus       400 ~~v~~~l~~~~~~~~~~~~~~~r~~~lGy~qRgg~PS~~Dr~la~~lG~~Av~~~~~G~tG~mv~i~~~~~~~~~w~~~~  479 (555)
T 2f48_A          400 EMIQSRLNDMKKRGEYKGSFTPVDHFFGYEGRSAFPSNFDSDYCYSLGYNAVVLILNGLTGYMSCIKNLNLKPTDWIAGG  479 (555)
T ss_dssp             HHHHHHHHHHHTTTCCCSCCCEEEEEESHHHHTSCCCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEECTTSCGGGCEEEE
T ss_pred             HHHHHHHHHHhcccCcccceeeeeccCCcchhCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEEEEEECCCCCccceEEEe
Confidence            99999999999889999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cchHhHHHHHHhcCCcccccchhhhccCCchhHHHHHhhccccccCceeCCccccccCCCC--CCCcceeEecC
Q 042388          486 TALTSLMDVERRHGKFKPVIKKAMVELEGIPFKTFASLREDWTIKNLYVSPGPIQFVGPNA--NDINHTLKLEL  557 (567)
Q Consensus       486 vPL~~~~~~e~~~g~~~p~i~~~~v~l~~~~f~~~~~~r~~w~~~d~y~~pGpiq~~g~~~--~~~~~tl~~e~  557 (567)
                      +||++|||+|+++|+.+|+|+|++|||+|++|+.|+++|++|+++|+||+||||||+||.+  |++++||.||+
T Consensus       480 vPl~~~~n~ek~~g~~~p~i~~~~Vdl~~~~f~~~~~~r~~w~~~d~y~~pGpiQ~~g~~~~~~~~~~tl~~e~  553 (555)
T 2f48_A          480 VPLTMLMNMEERYGEKKPVIKKALVDLEGRPFKEFVKNRDKWALNNLYLYPGPVQYFGSSEIVDEITETLKLEL  553 (555)
T ss_dssp             EEGGGGEEEEEETTEEEEEECCCCCCTTSHHHHHHHHHHHHHHHSCCCCCCCCCCCSSCHHHHTCCCHHHHHHT
T ss_pred             eeHHHHhhhhhhcCccccceeeeeeCCCCHHHHHHHHHHHHhhhcCcccCCCCEeecCccccccCCCceeeccc
Confidence            9999999999999999999999999999999999999999999999999999999999999  99999999997
>3hno_A Pyrophosphate-dependent phosphofructokinase; structural genomics, PSI-2, protein structure initiative; 2.00A {Nitrosospira multiformis atcc 25196} PDB: 3k2q_A Back     alignment and structure
>1pfk_A Phosphofructokinase; transferase(phosphotransferase); HET: FBP ADP; 2.40A {Escherichia coli} SCOP: c.89.1.1 PDB: 2pfk_A Back     alignment and structure
>1zxx_A 6-phosphofructokinase; allosteric regulation, lactobacillus BU transferase; 1.85A {Lactobacillus delbrueckii subsp} Back     alignment and structure
>2hig_A 6-phospho-1-fructokinase; transferase; 2.40A {Trypanosoma brucei} PDB: 3f5m_A* Back     alignment and structure
>4a3s_A 6-phosphofructokinase; transferase, glycolysis, degradosome; 2.30A {Bacillus subtilis} PDB: 6pfk_A 3u39_A 3pfk_A 4pfk_A* 1mto_A* Back     alignment and structure
>3o8l_A 6-phosphofructokinase, muscle type; transferase; HET: ATP ADP; 3.20A {Oryctolagus cuniculus} PDB: 3o8n_A* Back     alignment and structure
>3o8o_B 6-phosphofructokinase subunit beta; transferase; HET: F6P FDP; 2.90A {Saccharomyces cerevisiae} Back     alignment and structure
>3o8o_A 6-phosphofructokinase subunit alpha; transferase; HET: F6P FDP; 2.90A {Saccharomyces cerevisiae} Back     alignment and structure
>3o8l_A 6-phosphofructokinase, muscle type; transferase; HET: ATP ADP; 3.20A {Oryctolagus cuniculus} PDB: 3o8n_A* Back     alignment and structure
>3opy_B 6-phosphofructo-1-kinase beta-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris} Back     alignment and structure
>3opy_A 6-phosphofructo-1-kinase alpha-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris} Back     alignment and structure
>3o8o_A 6-phosphofructokinase subunit alpha; transferase; HET: F6P FDP; 2.90A {Saccharomyces cerevisiae} Back     alignment and structure
>3opy_B 6-phosphofructo-1-kinase beta-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris} Back     alignment and structure
>3o8o_B 6-phosphofructokinase subunit beta; transferase; HET: F6P FDP; 2.90A {Saccharomyces cerevisiae} Back     alignment and structure
>3opy_A 6-phosphofructo-1-kinase alpha-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris} Back     alignment and structure
>3m9w_A D-xylose-binding periplasmic protein; xylose binding protein, conformational changes, SUGA protein; 2.15A {Escherichia coli} PDB: 3m9x_A* 3ma0_A* Back     alignment and structure
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A* Back     alignment and structure
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides} Back     alignment and structure
>3g1w_A Sugar ABC transporter; sugar-binding protein, bacillus halod target 11229F, transport protein, structural genomics; 2.02A {Bacillus halodurans c-125} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 567
d2f48a1550 c.89.1.1 (A:4-553) Pyrophosphate-dependent phospho 0.0
d1pfka_320 c.89.1.1 (A:) ATP-dependent phosphofructokinase {E 3e-43
d1pfka_320 c.89.1.1 (A:) ATP-dependent phosphofructokinase {E 0.001
d4pfka_319 c.89.1.1 (A:) ATP-dependent phosphofructokinase {B 2e-42
>d2f48a1 c.89.1.1 (A:4-553) Pyrophosphate-dependent phosphofructokinase {Lyme disease spirochete (Borrelia burgdorferi) [TaxId: 139]} Length = 550 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Phosphofructokinase
superfamily: Phosphofructokinase
family: Phosphofructokinase
domain: Pyrophosphate-dependent phosphofructokinase
species: Lyme disease spirochete (Borrelia burgdorferi) [TaxId: 139]

 Score =  541 bits (1394), Expect = 0.0
 Identities = 262/552 (47%), Positives = 363/552 (65%), Gaps = 18/552 (3%)

Query: 22  SELQTSRLNVSLPLPSVLKKTFN---VVDGAPSSASGNPEEIKKLFPKLFGQPSARLVEC 78
           S  +  R      LP++LKK FN   +V G  + A  + + +K+ F   +G P     E 
Sbjct: 1   SLFKQERQKYIPKLPNILKKDFNNISLVYGENTEAIQDRQALKEFFKNTYGLPIISFTEG 60

Query: 79  DPKACSMENKSLKIGVVLSGGQAPGGHNVISGIFDYLQERTNGSKLYGFKGGPAGIMKCK 138
           +       +K+L IG++LSGG APGGHNVISG+FD +++    SKL+GFKGGP G+++  
Sbjct: 61  ESSL--SFSKALNIGIILSGGPAPGGHNVISGVFDAIKKFNPNSKLFGFKGGPLGLLEND 118

Query: 139 YVELSTEYIYPYRNQGGFDMICSGRDKIETPEQFKQAEETAKKLDLDGLVVIGGDDSNTN 198
            +EL+   I  YRN GGFD++ SGR KIET E + +A   AK+ +L+ +++IGGDDSNTN
Sbjct: 119 KIELTESLINSYRNTGGFDIVSSGRTKIETEEHYNKALFVAKENNLNAIIIIGGDDSNTN 178

Query: 199 ACLLAENFRSKDMKTRVIGCPKTIDGDLKCKEVPTSFGFDTACKIFSEMIGNVMTDARST 258
           A +LAE F+      +VIG PKTID DL+   +  SFGFD+A KI+SE+IGN+  DA ST
Sbjct: 179 AAILAEYFKKNGENIQVIGVPKTIDADLRNDHIEISFGFDSATKIYSELIGNLCRDAMST 238

Query: 259 GKYYHFVRLMGRAASHITLECALQTHPNITIIGEEVAAKKQTLKNVTDYITDIICKRSEA 318
            KY+HFV+LMGR+ASH+ LECAL+THPNI I+ EEV AKK+TL  + D +  +I KRS  
Sbjct: 239 KKYWHFVKLMGRSASHVALECALKTHPNICIVSEEVLAKKKTLSEIIDEMVSVILKRSLN 298

Query: 319 GYNYGVILIPEGLIDFIPEVQQLIAELNEILAHDGVDQDG--------AWKKKLKSQSQE 370
           G N+GV+++PEGLI+FIPEV+ L+ EL +I   +  +  G         +  KL    + 
Sbjct: 299 GDNFGVVIVPEGLIEFIPEVKSLMLELCDIFDKNEGEFKGLNIEKMKEIFVAKLSDYMKG 358

Query: 371 LFELFPKAIQEQLL---LERDPHGNVQVAKIETEKMLIQMVETELNKMKQKGAYKGQFNG 427
           ++   P  IQ +L+   LERDPHGN  V+++ TEK+ I+M+++ LN MK++G YKG F  
Sbjct: 359 VYLSLPLFIQFELIKSILERDPHGNFNVSRVPTEKLFIEMIQSRLNDMKKRGEYKGSFTP 418

Query: 428 QSHFFGYEGRCGLPTNFDANYCYALGYAAAALLHAGKTGLISSVGNLGEPVEEWTVGGTA 487
             HFFGYEGR   P+NFD++YCY+LGY A  L+  G TG +S + NL     +W  GG  
Sbjct: 419 VDHFFGYEGRSAFPSNFDSDYCYSLGYNAVVLILNGLTGYMSCIKNLNLKPTDWIAGGVP 478

Query: 488 LTSLMDVERRHGKFKPVIKKAMVELEGIPFKTFASLREDWTIKNLYVSPGPIQFVGP--N 545
           LT LM++E R+G+ KPVIKKA+V+LEG PFK F   R+ W + NLY+ PGP+Q+ G    
Sbjct: 479 LTMLMNMEERYGEKKPVIKKALVDLEGRPFKEFVKNRDKWALNNLYLYPGPVQYFGSSEI 538

Query: 546 ANDINHTLKLEL 557
            ++I  TLKLEL
Sbjct: 539 VDEITETLKLEL 550
>d1pfka_ c.89.1.1 (A:) ATP-dependent phosphofructokinase {Escherichia coli [TaxId: 562]} Length = 320 Back     information, alignment and structure
>d1pfka_ c.89.1.1 (A:) ATP-dependent phosphofructokinase {Escherichia coli [TaxId: 562]} Length = 320 Back     information, alignment and structure
>d4pfka_ c.89.1.1 (A:) ATP-dependent phosphofructokinase {Bacillus stearothermophilus [TaxId: 1422]} Length = 319 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query567
d2f48a1550 Pyrophosphate-dependent phosphofructokinase {Lyme 100.0
d4pfka_319 ATP-dependent phosphofructokinase {Bacillus stearo 100.0
d1pfka_320 ATP-dependent phosphofructokinase {Escherichia col 100.0
d1z0sa1249 Inorganic polyphosphate/ATP-NAD kinase PpnK {Archa 81.3
>d2f48a1 c.89.1.1 (A:4-553) Pyrophosphate-dependent phosphofructokinase {Lyme disease spirochete (Borrelia burgdorferi) [TaxId: 139]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Phosphofructokinase
superfamily: Phosphofructokinase
family: Phosphofructokinase
domain: Pyrophosphate-dependent phosphofructokinase
species: Lyme disease spirochete (Borrelia burgdorferi) [TaxId: 139]

Probab=100.00  E-value=9.9e-146  Score=1197.84  Aligned_cols=534  Identities=49%  Similarity=0.863  Sum_probs=512.2

Q ss_pred             CHhhhhhcCCCCCCccccccc---cceecCCCCCCCCChhHHHhhCCcccCCCeeEEecCCcccccCCCCCcEEEEEecC
Q 042388           22 SELQTSRLNVSLPLPSVLKKT---FNVVDGAPSSASGNPEEIKKLFPKLFGQPSARLVECDPKACSMENKSLKIGVVLSG   98 (567)
Q Consensus        22 s~l~~~r~~~~p~lp~~l~~~---~~~~~~~~~~~~~~~~~i~~~fp~~~~~p~~~~~~~~~~~~~~~~~~~~IgIv~sG   98 (567)
                      |+||++|++|+|+||++|++.   +++.+++++.+..|+++|+++||+||++|.++|.++++  .....+++||||||||
T Consensus         1 s~~q~~r~~~~p~lp~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~fp~~~~~p~~~~~~~~~--~~~~~~~~rIgIl~sG   78 (550)
T d2f48a1           1 SLFKQERQKYIPKLPNILKKDFNNISLVYGENTEAIQDRQALKEFFKNTYGLPIISFTEGES--SLSFSKALNIGIILSG   78 (550)
T ss_dssp             CHHHHHHTTCCCCCCGGGGSCGGGEEEEECCCCCCSSCHHHHHHHTTTTTTCCCEEEEESCC--CCSCCSCCEEEEEEBS
T ss_pred             CHhHHHHHhCCCCCChhHhCccceeeeccCCcccccCCHHHHHHHhHHhcCCceeeeccCCC--CCCcCCCCEEEEECcC
Confidence            899999999999999999865   56788999999999999999999999999999998862  4455678999999999


Q ss_pred             CCCchhhHHHHHHHHHHHHhcCCCEEEEEeCCcccccCCCEEEcCccccccccccCCcccccccCCCCCChHHHHHHHHH
Q 042388           99 GQAPGGHNVISGIFDYLQERTNGSKLYGFKGGPAGIMKCKYVELSTEYIYPYRNQGGFDMICSGRDKIETPEQFKQAEET  178 (567)
Q Consensus        99 G~aPG~nnvI~gl~~~l~~~~~~~~v~Gf~~G~~GLl~~~~~eLt~~~v~~~~n~GG~~~LGS~R~k~~~~e~~~~~~~~  178 (567)
                      |||||+||||+|+++++++.+++++||||++||+||+++++++|+++.++.|+|+|||+++||+|.++.+++++++++++
T Consensus        79 G~aPG~N~vI~gvv~~~~~~~~~~~v~G~~~G~~GL~~~~~~~L~~~~v~~~~~~GG~~l~~s~r~~~~~~e~~~~i~~~  158 (550)
T d2f48a1          79 GPAPGGHNVISGVFDAIKKFNPNSKLFGFKGGPLGLLENDKIELTESLINSYRNTGGFDIVSSGRTKIETEEHYNKALFV  158 (550)
T ss_dssp             SCCTTHHHHHHHHHHHHHHHCTTCEEEEETTTTHHHHTTCEEEECHHHHHHHTTCCSSTTTCCBCCCCCSHHHHHHHHHH
T ss_pred             CCcHHHHHHHHHHHHHHHHhCCCCEEEEECcchHHhcCCCEEECCHHHHhhHHhCCCcEecCCCCCCCcCHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999998888889999999999999999


Q ss_pred             HHHcCCCEEEEecCchhHHHHHHHHHHHhcCCCCccEEEecccCcCCCCCCCCCCCCChHhHHHHHHHHHHHHHHHHhhc
Q 042388          179 AKKLDLDGLVVIGGDDSNTNACLLAENFRSKDMKTRVIGCPKTIDGDLKCKEVPTSFGFDTACKIFSEMIGNVMTDARST  258 (567)
Q Consensus       179 l~~~~id~LViIGGddS~t~A~~Lae~~~~~g~~i~VIgVPKTIDNDL~~~~ie~S~GFdTA~k~~ae~I~ni~~da~S~  258 (567)
                      |++++||+||+||||||+++|++|+|||++++++|+||||||||||||+++++|+|||||||+++++++|+||++||.|+
T Consensus       159 l~~~~Id~LviIGGd~S~~~a~~Lae~~~~~~~~i~vigvPKTIDNDl~~~~~d~s~GfdTA~~~~~~~i~~l~~da~S~  238 (550)
T d2f48a1         159 AKENNLNAIIIIGGDDSNTNAAILAEYFKKNGENIQVIGVPKTIDADLRNDHIEISFGFDSATKIYSELIGNLCRDAMST  238 (550)
T ss_dssp             HHHTTCSEEEEEESHHHHHHHHHHHHHHHHTTCCCEEEEEEEETTCCCCCSSCCCCEEHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHhcCCCEEEEECChHHHHHHHHHHHHHHHhCCCccEEEecccccCCCCCccccccccHHHHHHHHHHHHHHHHHHHhhc
Confidence            99999999999999999999999999999999999999999999999999888899999999999999999999999999


Q ss_pred             CCeeEEEEecCCCCcHHHHHhhhhcCCcEEEECCcchhhhcchHhHHHHHHHHHHHHHHcCCCeEEEEEeCCCCCCchHH
Q 042388          259 GKYYHFVRLMGRAASHITLECALQTHPNITIIGEEVAAKKQTLKNVTDYITDIICKRSEAGYNYGVILIPEGLIDFIPEV  338 (567)
Q Consensus       259 ~k~~~fVevMGR~ag~LAL~~aLat~pnivlIpEe~~~~~~tL~~iv~~i~d~I~~R~~~gk~~gvIli~EGl~~~ipe~  338 (567)
                      +++|||||+|||+||||||+||||||||+|||||++++++++|.+|+++||+.|++|+..|++|||||||||+++|+||+
T Consensus       239 ~~~~~~VevMGR~aG~lAl~~alat~a~~ilipE~~~~~~~~L~~i~~~i~~~I~kR~~~gk~~gvIvV~EGli~~ipe~  318 (550)
T d2f48a1         239 KKYWHFVKLMGRSASHVALECALKTHPNICIVSEEVLAKKKTLSEIIDEMVSVILKRSLNGDNFGVVIVPEGLIEFIPEV  318 (550)
T ss_dssp             CCCEEEEEECCTTSCHHHHHHHHHHCCSEECCHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCCCEEEEEETTGGGTSHHH
T ss_pred             ccceEEEEEecCCCcHHHHHHHHhcCCceEEecccccchhhhHHHHHHHHHHHHHHHHHcCCCcEEEEecCcccccchHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhhcCCcCC--------CcchhhhcchhhHHHHhhchHHHHHHh---hhcCCCCCCcccchhhhHHHHHHH
Q 042388          339 QQLIAELNEILAHDGVDQ--------DGAWKKKLKSQSQELFELFPKAIQEQL---LLERDPHGNVQVAKIETEKMLIQM  407 (567)
Q Consensus       339 ~~li~el~~~~~~~~~~~--------~g~~~~~ls~~~~~lf~~lp~~i~~ql---~~~rD~~Gn~~ls~i~te~lL~~l  407 (567)
                      +.||+|+|+++.+...+.        ...+..+|+++++++|.+||.+||+||   +++||+|||+||++|+||++|+++
T Consensus       319 ~~Li~el~~~l~~~~~~~~~~~~~~~~~~~~~~ls~~~~~l~~~lp~~i~~qll~~~~~rD~~G~~~ls~I~~e~lLa~~  398 (550)
T d2f48a1         319 KSLMLELCDIFDKNEGEFKGLNIEKMKEIFVAKLSDYMKGVYLSLPLFIQFELIKSILERDPHGNFNVSRVPTEKLFIEM  398 (550)
T ss_dssp             HHHHHHHHHHHHHSHHHHTTCCHHHHHHHHHHHSCHHHHHHHHTSCHHHHHHHHHHHHTCCTTCCCCCTTSCHHHHHHHH
T ss_pred             HHHHHHHHHhhhhcccccccccchhhhhhhhhhcchhhhhhhhcccHHHHHHHhhcccccCCCCCeeeccccHHHHHHHH
Confidence            999999999987653211        123788999999999999999999999   568999999999999999999999


Q ss_pred             HHHHHHHhhhcCCcCcccccceecCcccccCCCCCHHHHHHHHHHHHHHHHHHHcCCCceEEEEecCCCCccceEEeccc
Q 042388          408 VETELNKMKQKGAYKGQFNGQSHFFGYEGRCGLPTNFDANYCYALGYAAAALLHAGKTGLISSVGNLGEPVEEWTVGGTA  487 (567)
Q Consensus       408 V~~~L~~r~~~~~y~~~f~~~~~~~Gy~~R~~~PS~fD~~~a~~lG~~Av~li~~g~tG~mv~i~~l~~~~~~w~~~~vP  487 (567)
                      |+++|++++..+.|+++|++++|+|||+|||+.||+||+.|||+||+.|++++++|+||||++|+|++.++++|+++++|
T Consensus       399 V~~~L~~~~~~~~~~~~f~~~~h~~GYe~R~a~PS~fD~~~a~~lG~~Av~~~~~G~tG~M~~I~~l~~~~~~w~~~~iP  478 (550)
T d2f48a1         399 IQSRLNDMKKRGEYKGSFTPVDHFFGYEGRSAFPSNFDSDYCYSLGYNAVVLILNGLTGYMSCIKNLNLKPTDWIAGGVP  478 (550)
T ss_dssp             HHHHHHHHHTTTCCCSCCCEEEEEESHHHHTSCCCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEECTTSCGGGCEEEEEE
T ss_pred             HHHHHHHhhhhcccccceeeeecccccceeCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEEEEEeCCCCCCceeEECCcc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHhHHHHHHhcCCcccccchhhhccCCchhHHHHHhhccccccCceeCCccccccCCCC--CCCcceeEecC
Q 042388          488 LTSLMDVERRHGKFKPVIKKAMVELEGIPFKTFASLREDWTIKNLYVSPGPIQFVGPNA--NDINHTLKLEL  557 (567)
Q Consensus       488 L~~~~~~e~~~g~~~p~i~~~~v~l~~~~f~~~~~~r~~w~~~d~y~~pGpiq~~g~~~--~~~~~tl~~e~  557 (567)
                      |++||++|+|.|+.+|||+|++|||+|++|++|+++|++|+++|+||+||||||+||.+  |.+|+||.||.
T Consensus       479 l~~~m~~e~r~g~~~~~i~k~~v~l~~~~f~~~~~~r~~w~~~d~y~~pGpiQ~~g~~~~~~~~~~tl~~e~  550 (550)
T d2f48a1         479 LTMLMNMEERYGEKKPVIKKALVDLEGRPFKEFVKNRDKWALNNLYLYPGPVQYFGSSEIVDEITETLKLEL  550 (550)
T ss_dssp             GGGGEEEEEETTEEEEEECCCCCCTTSHHHHHHHHHHHHHHHSCCCCCCCCCCCSSCHHHHTCCCHHHHHHT
T ss_pred             HHHHhhHHHhcCCcCcceecceeCCCcHHHHHHHHHHHHHHhcCcCcCCCCcccCCchhhcccccchhcccC
Confidence            99999999999999999999999999999999999999999999999999999999987  99999999984
>d4pfka_ c.89.1.1 (A:) ATP-dependent phosphofructokinase {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1pfka_ c.89.1.1 (A:) ATP-dependent phosphofructokinase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1z0sa1 e.52.1.1 (A:1-249) Inorganic polyphosphate/ATP-NAD kinase PpnK {Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure