Citrus Sinensis ID: 045545


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------16
MNTTRYEHETFIEPSQKIRDFGVKLKLSPVTGVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMRIASPPIIASCYYGVDTPSSEELISNRMSVEEIREFIGCDSLAFLLIDSLNKMLGDDSQNFCYACFSGKYPVKPEEMKVKRVGEFVDDG
cccccccccccccccHHHHHHHcccccccccccccccEEEEEcccccccccHHHHHHHHHHccccEEEEEEcccccccccccccccccHHHHHHccccHHHHHHHHcccccccccHHHHHHHHcccccccccccccccccccccHHHHHHHccccccc
cccccccccccccccccccccHHHHHEEEcHHHcccccEEEEEccccccHHHHHHHHHHHHcccccEEEEEcccccccccccccccccccccccccccHHHHHHHHcccEEEEccHHHHHHHHcccccccEEEEEcccccccccHHHHHHHHHHHccc
mnttryehetfiepsqkirdfgvklklspvtgvlegkrvvvvddsivrgtTSSKIVRLLKEAGAkevhmriasppiiascyygvdtpsseelisnRMSVEEIREFIGCDSLAFLLIDSLNkmlgddsqnfcyacfsgkypvkpeemkVKRVGEFVDDG
mnttryehetfiepsqkirdfgVKLKLspvtgvlegkrvvvvddsivrgttsskiVRLLKeagakevhmriasppiiASCYYGVDTPSSEELISNRMSVEEIREFIGCDSLAFLLIDSLNKMLGDDSQNFCYACFSgkypvkpeemkvkrvgefvddg
MNTTRYEHETFIEPSQKIRDFGVKLKLSPVTGVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMRIASPPIIASCYYGVDTPSSEELISNRMSVEEIREFIGCDSLAFLLIDSLNKMLGDDSQNFCYACFSGKYPVKPEEMKVKRVGEFVDDG
****************KIRDFGVKLKLSPVTGVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMRIASPPIIASCYYGVDTPSSEELISNRMSVEEIREFIGCDSLAFLLIDSLNKMLGDDSQNFCYACFSGKYPV*****************
MNTTRYEHETFIEPSQKIRDFGVKLKLSPVTGVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMRIASPPIIASCYYGVDTPSSEELISNRMSVEEIREFIGCDSLAFLLIDSLNKMLGDDSQNFCYACFSGKYPVKPEEMKVKRVGEFV***
MNTTRYEHETFIEPSQKIRDFGVKLKLSPVTGVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMRIASPPIIASCYYGVDTPSSEELISNRMSVEEIREFIGCDSLAFLLIDSLNKMLGDDSQNFCYACFSGKYPVKPEEMKVKRVGEFVDDG
*NTTRYEHETFIEPSQKIRDFGVKLKLSPVTGVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMRIASPPIIASCYYGVDTPSSEELISNRMSVEEIREFIGCDSLAFLLIDSLNKMLGDDSQNFCYACFSGKYPVKPEEMKVKRVGEF****
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MNTTRYEHETFIEPSQKIRDFGVKLKLSPVTGVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMRIASPPIIASCYYGVDTPSSEELISNRMSVEEIREFIGCDSLAFLLIDSLNKMLGDDSQNFCYACFSGKYPVKPEEMKVKRVGEFVDDG
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query158 2.2.26 [Sep-21-2011]
Q9STG9561 Amidophosphoribosyltransf yes no 0.981 0.276 0.825 1e-70
Q9SI61566 Amidophosphoribosyltransf no no 0.981 0.273 0.826 3e-69
P52418569 Amidophosphoribosyltransf no no 0.943 0.261 0.832 1e-68
P52419485 Amidophosphoribosyltransf N/A no 0.873 0.284 0.833 3e-63
Q9T0J5532 Amidophosphoribosyltransf no no 0.898 0.266 0.706 9e-54
P00497476 Amidophosphoribosyltransf yes no 0.879 0.292 0.587 3e-42
Q55621495 Amidophosphoribosyltransf N/A no 0.867 0.276 0.547 2e-41
Q55038493 Amidophosphoribosyltransf yes no 0.930 0.298 0.5 7e-40
Q57657471 Probable amidophosphoribo yes no 0.867 0.290 0.539 6e-37
Q9V253447 Amidophosphoribosyltransf yes no 0.841 0.297 0.562 9e-37
>sp|Q9STG9|ASE2_ARATH Amidophosphoribosyltransferase 2, chloroplastic OS=Arabidopsis thaliana GN=ASE2 PE=1 SV=1 Back     alignment and function desciption
 Score =  264 bits (675), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 128/155 (82%), Positives = 141/155 (90%)

Query: 4   TRYEHETFIEPSQKIRDFGVKLKLSPVTGVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAG 63
           + Y   TFIEPSQKIRDFGVKLKLSPV GVLEGKRVVVVDDSIVRGTTSSKIVRLL+EAG
Sbjct: 393 SHYVGRTFIEPSQKIRDFGVKLKLSPVRGVLEGKRVVVVDDSIVRGTTSSKIVRLLREAG 452

Query: 64  AKEVHMRIASPPIIASCYYGVDTPSSEELISNRMSVEEIREFIGCDSLAFLLIDSLNKML 123
           AKEVHMRIASPPIIASCYYGVDTPSS ELISNRMSV+EIR++IGCDSLAFL  ++L K L
Sbjct: 453 AKEVHMRIASPPIIASCYYGVDTPSSNELISNRMSVDEIRDYIGCDSLAFLSFETLKKHL 512

Query: 124 GDDSQNFCYACFSGKYPVKPEEMKVKRVGEFVDDG 158
           G+DS++FCYACF+G YPVKP E KVKR G+F+DDG
Sbjct: 513 GEDSRSFCYACFTGDYPVKPTEDKVKRGGDFIDDG 547




Catalyzes the first committed step of 'de novo purine biosynthesis from glutamine. Required for chloroplast biogenesis and cell division. Confers sensitivity to the phenyltriazole acetic acid compound [5-(4-chlorophenyl)-1-isopropyl-1H-[1,2,4]triazol-3-yl]-acetic acid (DAS734), a bleaching herbicide.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 4EC: .EC: 2EC: .EC: 1EC: 4
>sp|Q9SI61|ASE1_ARATH Amidophosphoribosyltransferase 1, chloroplastic OS=Arabidopsis thaliana GN=ASE1 PE=2 SV=1 Back     alignment and function description
>sp|P52418|PUR1_SOYBN Amidophosphoribosyltransferase, chloroplastic OS=Glycine max GN=PUR1 PE=2 SV=1 Back     alignment and function description
>sp|P52419|PUR1_VIGAC Amidophosphoribosyltransferase, chloroplastic (Fragment) OS=Vigna aconitifolia GN=PUR1 PE=2 SV=1 Back     alignment and function description
>sp|Q9T0J5|ASE3_ARATH Amidophosphoribosyltransferase 3, chloroplastic OS=Arabidopsis thaliana GN=ASE3 PE=1 SV=1 Back     alignment and function description
>sp|P00497|PUR1_BACSU Amidophosphoribosyltransferase OS=Bacillus subtilis (strain 168) GN=purF PE=1 SV=2 Back     alignment and function description
>sp|Q55621|PUR1_SYNY3 Amidophosphoribosyltransferase OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=purF PE=3 SV=1 Back     alignment and function description
>sp|Q55038|PUR1_SYNE7 Amidophosphoribosyltransferase OS=Synechococcus elongatus (strain PCC 7942) GN=purF PE=3 SV=1 Back     alignment and function description
>sp|Q57657|PUR1_METJA Probable amidophosphoribosyltransferase OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=purF PE=3 SV=3 Back     alignment and function description
>sp|Q9V253|PUR1_PYRAB Amidophosphoribosyltransferase OS=Pyrococcus abyssi (strain GE5 / Orsay) GN=purF PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query158
255543899 593 amidophosphoribosyltransferase, putative 0.981 0.261 0.877 2e-74
224080500 586 predicted protein [Populus trichocarpa] 0.981 0.264 0.877 1e-73
357473601 569 Amidophosphoribosyltransferase [Medicago 0.981 0.272 0.870 2e-72
118485692 585 unknown [Populus trichocarpa] 0.981 0.264 0.858 5e-72
224103309 485 predicted protein [Populus trichocarpa] 0.981 0.319 0.858 2e-71
449464834 577 PREDICTED: amidophosphoribosyltransferas 0.981 0.268 0.864 3e-71
449528403 623 PREDICTED: amidophosphoribosyltransferas 0.981 0.248 0.864 3e-71
388495666 261 unknown [Lotus japonicus] 0.981 0.593 0.864 5e-71
356545023 566 PREDICTED: amidophosphoribosyltransferas 0.981 0.273 0.851 7e-71
356531589 573 PREDICTED: amidophosphoribosyltransferas 0.981 0.270 0.851 1e-70
>gi|255543899|ref|XP_002513012.1| amidophosphoribosyltransferase, putative [Ricinus communis] gi|223548023|gb|EEF49515.1| amidophosphoribosyltransferase, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  283 bits (723), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 136/155 (87%), Positives = 146/155 (94%)

Query: 4   TRYEHETFIEPSQKIRDFGVKLKLSPVTGVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAG 63
           + Y   TFIEPSQKIRDFGVKLKLSPV GVLEG+RVVVVDDSIVRGTTSSKIVRLLKEAG
Sbjct: 405 SHYVGRTFIEPSQKIRDFGVKLKLSPVRGVLEGQRVVVVDDSIVRGTTSSKIVRLLKEAG 464

Query: 64  AKEVHMRIASPPIIASCYYGVDTPSSEELISNRMSVEEIREFIGCDSLAFLLIDSLNKML 123
           AKEVHMRIASPPIIASCYYGVDTPSSEELISNRM+VEEIREFIGCDSLAFL +DSL  +L
Sbjct: 465 AKEVHMRIASPPIIASCYYGVDTPSSEELISNRMTVEEIREFIGCDSLAFLPLDSLKNLL 524

Query: 124 GDDSQNFCYACFSGKYPVKPEEMKVKRVGEFVDDG 158
           G+DS NFCYACFSGKYPV+P+E+KVKRVG+FVDDG
Sbjct: 525 GNDSSNFCYACFSGKYPVEPKELKVKRVGDFVDDG 559




Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224080500|ref|XP_002306145.1| predicted protein [Populus trichocarpa] gi|222849109|gb|EEE86656.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|357473601|ref|XP_003607085.1| Amidophosphoribosyltransferase [Medicago truncatula] gi|355508140|gb|AES89282.1| Amidophosphoribosyltransferase [Medicago truncatula] Back     alignment and taxonomy information
>gi|118485692|gb|ABK94696.1| unknown [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224103309|ref|XP_002313004.1| predicted protein [Populus trichocarpa] gi|222849412|gb|EEE86959.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449464834|ref|XP_004150134.1| PREDICTED: amidophosphoribosyltransferase 2, chloroplastic-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449528403|ref|XP_004171194.1| PREDICTED: amidophosphoribosyltransferase 2, chloroplastic-like, partial [Cucumis sativus] Back     alignment and taxonomy information
>gi|388495666|gb|AFK35899.1| unknown [Lotus japonicus] Back     alignment and taxonomy information
>gi|356545023|ref|XP_003540945.1| PREDICTED: amidophosphoribosyltransferase, chloroplastic-like [Glycine max] Back     alignment and taxonomy information
>gi|356531589|ref|XP_003534359.1| PREDICTED: amidophosphoribosyltransferase, chloroplastic-like [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query158
TAIR|locus:2139549561 ASE2 "GLN phosphoribosyl pyrop 0.981 0.276 0.825 5.2e-65
TAIR|locus:2045081566 ASE1 "GLN phosphoribosyl pyrop 0.981 0.273 0.826 4.7e-64
TAIR|locus:2141811532 ASE3 "GLN phosphoribosyl pyrop 0.898 0.266 0.706 2e-49
TIGR_CMR|GSU_1636466 GSU_1636 "amidophosphoribosylt 0.860 0.291 0.595 1.1e-39
TIGR_CMR|DET_1415472 DET_1415 "amidophosphoribosylt 0.886 0.296 0.556 2.1e-38
TIGR_CMR|BA_0295471 BA_0295 "amidophosphoribosyltr 0.860 0.288 0.564 1.7e-36
TIGR_CMR|CHY_1075452 CHY_1075 "amidophosphoribosylt 0.848 0.296 0.536 2.7e-36
TIGR_CMR|SPO_2677490 SPO_2677 "amidophosphoribosylt 0.898 0.289 0.5 3.1e-35
TIGR_CMR|APH_1300468 APH_1300 "amidophosphoribosylt 0.867 0.292 0.478 2.5e-33
TIGR_CMR|ECH_0139462 ECH_0139 "amidophosphoribosylt 0.860 0.294 0.482 8.5e-33
TAIR|locus:2139549 ASE2 "GLN phosphoribosyl pyrophosphate amidotransferase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 662 (238.1 bits), Expect = 5.2e-65, P = 5.2e-65
 Identities = 128/155 (82%), Positives = 141/155 (90%)

Query:     4 TRYEHETFIEPSQKIRDFGVKLKLSPVTGVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAG 63
             + Y   TFIEPSQKIRDFGVKLKLSPV GVLEGKRVVVVDDSIVRGTTSSKIVRLL+EAG
Sbjct:   393 SHYVGRTFIEPSQKIRDFGVKLKLSPVRGVLEGKRVVVVDDSIVRGTTSSKIVRLLREAG 452

Query:    64 AKEVHMRIASPPIIASCYYGVDTPSSEELISNRMSVEEIREFIGCDSLAFLLIDSLNKML 123
             AKEVHMRIASPPIIASCYYGVDTPSS ELISNRMSV+EIR++IGCDSLAFL  ++L K L
Sbjct:   453 AKEVHMRIASPPIIASCYYGVDTPSSNELISNRMSVDEIRDYIGCDSLAFLSFETLKKHL 512

Query:   124 GDDSQNFCYACFSGKYPVKPEEMKVKRVGEFVDDG 158
             G+DS++FCYACF+G YPVKP E KVKR G+F+DDG
Sbjct:   513 GEDSRSFCYACFTGDYPVKPTEDKVKRGGDFIDDG 547




GO:0004044 "amidophosphoribosyltransferase activity" evidence=IEA;ISS;IMP;TAS
GO:0006164 "purine nucleotide biosynthetic process" evidence=RCA;IMP;TAS
GO:0009113 "purine nucleobase biosynthetic process" evidence=ISS
GO:0009507 "chloroplast" evidence=ISM;IDA
GO:0009965 "leaf morphogenesis" evidence=IMP
GO:0009532 "plastid stroma" evidence=IDA
GO:0009570 "chloroplast stroma" evidence=IDA
GO:0005829 "cytosol" evidence=RCA
GO:0009658 "chloroplast organization" evidence=IMP
TAIR|locus:2045081 ASE1 "GLN phosphoribosyl pyrophosphate amidotransferase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2141811 ASE3 "GLN phosphoribosyl pyrophosphate amidotransferase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TIGR_CMR|GSU_1636 GSU_1636 "amidophosphoribosyltransferase" [Geobacter sulfurreducens PCA (taxid:243231)] Back     alignment and assigned GO terms
TIGR_CMR|DET_1415 DET_1415 "amidophosphoribosyltransferase" [Dehalococcoides ethenogenes 195 (taxid:243164)] Back     alignment and assigned GO terms
TIGR_CMR|BA_0295 BA_0295 "amidophosphoribosyltransferase" [Bacillus anthracis str. Ames (taxid:198094)] Back     alignment and assigned GO terms
TIGR_CMR|CHY_1075 CHY_1075 "amidophosphoribosyltransferase" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)] Back     alignment and assigned GO terms
TIGR_CMR|SPO_2677 SPO_2677 "amidophosphoribosyltransferase" [Ruegeria pomeroyi DSS-3 (taxid:246200)] Back     alignment and assigned GO terms
TIGR_CMR|APH_1300 APH_1300 "amidophosphoribosyltransferase" [Anaplasma phagocytophilum HZ (taxid:212042)] Back     alignment and assigned GO terms
TIGR_CMR|ECH_0139 ECH_0139 "amidophosphoribosyltransferase" [Ehrlichia chaffeensis str. Arkansas (taxid:205920)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9STG9ASE2_ARATH2, ., 4, ., 2, ., 1, 40.82580.98100.2762yesno

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
gw1.IV.836.1
amidophosphoribosyltransferase (EC-2.4.2.14) (485 aa)
(Populus trichocarpa)
Predicted Functional Partners:
gw1.86.80.1
hypothetical protein (441 aa)
   0.997
estExt_fgenesh4_pm.C_LG_X0439
aminoimidazolecarboximide ribonucleotide transformylase/inosine monophosphate cyclohydrolase (E [...] (545 aa)
   0.970
gw1.X.4384.1
carbamoyl-phosphate synthase (EC-6.3.4.16) (1081 aa)
    0.961
gw1.II.2846.1
phosphoribosylformylglycinamidine cyclo-ligase (EC-6.3.3.1) (321 aa)
   0.958
fgenesh4_pm.C_LG_XIV000303
phosphoribosylformylglycinamidine cyclo-ligase (EC-6.3.3.1) (337 aa)
   0.954
GART
hypothetical protein (215 aa)
     0.952
fgenesh4_pg.C_scaffold_29000089
carbamoyl-phosphate synthase (glutamine-hydrolyzing) (EC-6.3.5.5) (390 aa)
    0.940
eugene3.00030549
carbamoyl-phosphate synthase (glutamine-hydrolyzing) (EC-6.3.5.5) (429 aa)
    0.934
gw1.XIX.1506.1
glucosamine-fructose-6-phosphate aminotransferase (EC-2.6.1.16) (676 aa)
   0.932
gw1.29.190.1
ribose-phosphate diphosphokinase (EC-2.7.6.1) (340 aa)
     0.932

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query158
PLN02440479 PLN02440, PLN02440, amidophosphoribosyltransferase 5e-92
COG0034470 COG0034, PurF, Glutamine phosphoribosylpyrophospha 8e-76
PRK09123479 PRK09123, PRK09123, amidophosphoribosyltransferase 5e-74
TIGR01134442 TIGR01134, purF, amidophosphoribosyltransferase 8e-72
PRK08525445 PRK08525, PRK08525, amidophosphoribosyltransferase 7e-70
PRK07349500 PRK07349, PRK07349, amidophosphoribosyltransferase 2e-63
PRK05793469 PRK05793, PRK05793, amidophosphoribosyltransferase 3e-63
PRK07631475 PRK07631, PRK07631, amidophosphoribosyltransferase 3e-61
PRK07272484 PRK07272, PRK07272, amidophosphoribosyltransferase 4e-59
PRK07847510 PRK07847, PRK07847, amidophosphoribosyltransferase 3e-57
PRK06781471 PRK06781, PRK06781, amidophosphoribosyltransferase 2e-50
PRK08341442 PRK08341, PRK08341, amidophosphoribosyltransferase 6e-50
PRK06388474 PRK06388, PRK06388, amidophosphoribosyltransferase 3e-46
PRK09246501 PRK09246, PRK09246, amidophosphoribosyltransferase 2e-38
cd06223130 cd06223, PRTases_typeI, Phosphoribosyl transferase 4e-11
pfam00156123 pfam00156, Pribosyltran, Phosphoribosyl transferas 2e-09
COG0462314 COG0462, PrsA, Phosphoribosylpyrophosphate synthet 3e-08
TIGR01251308 TIGR01251, ribP_PPkin, ribose-phosphate pyrophosph 4e-08
PRK03092304 PRK03092, PRK03092, ribose-phosphate pyrophosphoki 2e-06
PRK00934285 PRK00934, PRK00934, ribose-phosphate pyrophosphoki 9e-06
PLN02369302 PLN02369, PLN02369, ribose-phosphate pyrophosphoki 2e-05
COG0634178 COG0634, Hpt, Hypoxanthine-guanine phosphoribosylt 1e-04
PRK02277200 PRK02277, PRK02277, orotate phosphoribosyltransfer 1e-04
PRK00455202 PRK00455, pyrE, orotate phosphoribosyltransferase; 2e-04
PRK06031233 PRK06031, PRK06031, phosphoribosyltransferase; Pro 2e-04
PRK09162181 PRK09162, PRK09162, hypoxanthine-guanine phosphori 5e-04
COG0856203 COG0856, COG0856, Orotate phosphoribosyltransferas 5e-04
COG0461201 COG0461, PyrE, Orotate phosphoribosyltransferase [ 9e-04
COG1040225 COG1040, ComFC, Predicted amidophosphoribosyltrans 0.001
PRK02812330 PRK02812, PRK02812, ribose-phosphate pyrophosphoki 0.001
TIGR00336173 TIGR00336, pyrE, orotate phosphoribosyltransferase 0.002
TIGR00201190 TIGR00201, comF, comF family protein 0.003
PRK01259309 PRK01259, PRK01259, ribose-phosphate pyrophosphoki 0.004
COG0503179 COG0503, Apt, Adenine/guanine phosphoribosyltransf 0.004
>gnl|CDD|215241 PLN02440, PLN02440, amidophosphoribosyltransferase Back     alignment and domain information
 Score =  275 bits (704), Expect = 5e-92
 Identities = 122/154 (79%), Positives = 131/154 (85%), Gaps = 5/154 (3%)

Query: 5   RYEHETFIEPSQKIRDFGVKLKLSPVTGVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGA 64
            Y   TFIEPSQKIRDF VKLKL+PV  VLEGKRVVVVDDSIVRGTTSSKIVR+L+EAGA
Sbjct: 309 HYVGRTFIEPSQKIRDFSVKLKLNPVRSVLEGKRVVVVDDSIVRGTTSSKIVRMLREAGA 368

Query: 65  KEVHMRIASPPIIASCYYGVDTPSSEELISNRMSVEEIREFIGCDSLAFLLIDSLNKMLG 124
           KEVHMRIASPPIIASCYYGVDTPS EELISNRMSVEEIR+FIGCDSLAFL ++ L K LG
Sbjct: 369 KEVHMRIASPPIIASCYYGVDTPSREELISNRMSVEEIRKFIGCDSLAFLPLEDLKKSLG 428

Query: 125 DDSQNFCYACFSGKYPVKPEEMKVKRVGEFVDDG 158
           ++S  FCYACFSG YPV P     KRVG  +DDG
Sbjct: 429 EESPRFCYACFSGDYPVLP-----KRVGGDIDDG 457


Length = 479

>gnl|CDD|223112 COG0034, PurF, Glutamine phosphoribosylpyrophosphate amidotransferase [Nucleotide transport and metabolism] Back     alignment and domain information
>gnl|CDD|236384 PRK09123, PRK09123, amidophosphoribosyltransferase; Provisional Back     alignment and domain information
>gnl|CDD|233285 TIGR01134, purF, amidophosphoribosyltransferase Back     alignment and domain information
>gnl|CDD|181456 PRK08525, PRK08525, amidophosphoribosyltransferase; Provisional Back     alignment and domain information
>gnl|CDD|235998 PRK07349, PRK07349, amidophosphoribosyltransferase; Provisional Back     alignment and domain information
>gnl|CDD|235611 PRK05793, PRK05793, amidophosphoribosyltransferase; Provisional Back     alignment and domain information
>gnl|CDD|181061 PRK07631, PRK07631, amidophosphoribosyltransferase; Provisional Back     alignment and domain information
>gnl|CDD|235984 PRK07272, PRK07272, amidophosphoribosyltransferase; Provisional Back     alignment and domain information
>gnl|CDD|236113 PRK07847, PRK07847, amidophosphoribosyltransferase; Provisional Back     alignment and domain information
>gnl|CDD|136048 PRK06781, PRK06781, amidophosphoribosyltransferase; Provisional Back     alignment and domain information
>gnl|CDD|181395 PRK08341, PRK08341, amidophosphoribosyltransferase; Provisional Back     alignment and domain information
>gnl|CDD|102351 PRK06388, PRK06388, amidophosphoribosyltransferase; Provisional Back     alignment and domain information
>gnl|CDD|236427 PRK09246, PRK09246, amidophosphoribosyltransferase; Provisional Back     alignment and domain information
>gnl|CDD|206754 cd06223, PRTases_typeI, Phosphoribosyl transferase (PRT)-type I domain Back     alignment and domain information
>gnl|CDD|215757 pfam00156, Pribosyltran, Phosphoribosyl transferase domain Back     alignment and domain information
>gnl|CDD|223538 COG0462, PrsA, Phosphoribosylpyrophosphate synthetase [Nucleotide transport and metabolism / Amino acid transport and metabolism] Back     alignment and domain information
>gnl|CDD|130318 TIGR01251, ribP_PPkin, ribose-phosphate pyrophosphokinase Back     alignment and domain information
>gnl|CDD|179535 PRK03092, PRK03092, ribose-phosphate pyrophosphokinase; Provisional Back     alignment and domain information
>gnl|CDD|234868 PRK00934, PRK00934, ribose-phosphate pyrophosphokinase; Provisional Back     alignment and domain information
>gnl|CDD|215209 PLN02369, PLN02369, ribose-phosphate pyrophosphokinase Back     alignment and domain information
>gnl|CDD|223707 COG0634, Hpt, Hypoxanthine-guanine phosphoribosyltransferase [Nucleotide transport and metabolism] Back     alignment and domain information
>gnl|CDD|235023 PRK02277, PRK02277, orotate phosphoribosyltransferase-like protein; Provisional Back     alignment and domain information
>gnl|CDD|234771 PRK00455, pyrE, orotate phosphoribosyltransferase; Validated Back     alignment and domain information
>gnl|CDD|235678 PRK06031, PRK06031, phosphoribosyltransferase; Provisional Back     alignment and domain information
>gnl|CDD|181675 PRK09162, PRK09162, hypoxanthine-guanine phosphoribosyltransferase; Provisional Back     alignment and domain information
>gnl|CDD|223925 COG0856, COG0856, Orotate phosphoribosyltransferase homologs [Nucleotide transport and metabolism] Back     alignment and domain information
>gnl|CDD|223537 COG0461, PyrE, Orotate phosphoribosyltransferase [Nucleotide transport and metabolism] Back     alignment and domain information
>gnl|CDD|223970 COG1040, ComFC, Predicted amidophosphoribosyltransferases [General function prediction only] Back     alignment and domain information
>gnl|CDD|235072 PRK02812, PRK02812, ribose-phosphate pyrophosphokinase; Provisional Back     alignment and domain information
>gnl|CDD|129436 TIGR00336, pyrE, orotate phosphoribosyltransferase Back     alignment and domain information
>gnl|CDD|232871 TIGR00201, comF, comF family protein Back     alignment and domain information
>gnl|CDD|234929 PRK01259, PRK01259, ribose-phosphate pyrophosphokinase; Provisional Back     alignment and domain information
>gnl|CDD|223577 COG0503, Apt, Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins [Nucleotide transport and metabolism] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 158
COG0034470 PurF Glutamine phosphoribosylpyrophosphate amidotr 100.0
PRK06388474 amidophosphoribosyltransferase; Provisional 100.0
PRK06781471 amidophosphoribosyltransferase; Provisional 100.0
PRK07631475 amidophosphoribosyltransferase; Provisional 100.0
PRK07349500 amidophosphoribosyltransferase; Provisional 100.0
KOG0572474 consensus Glutamine phosphoribosylpyrophosphate am 100.0
PRK07847510 amidophosphoribosyltransferase; Provisional 100.0
PRK09246501 amidophosphoribosyltransferase; Provisional 100.0
PRK08341442 amidophosphoribosyltransferase; Provisional 99.98
PRK07272484 amidophosphoribosyltransferase; Provisional 99.98
PLN02440479 amidophosphoribosyltransferase 99.97
PRK05793469 amidophosphoribosyltransferase; Provisional 99.97
TIGR01134442 purF amidophosphoribosyltransferase. Alternate nam 99.97
PRK09123479 amidophosphoribosyltransferase; Provisional 99.97
PRK08525445 amidophosphoribosyltransferase; Provisional 99.96
COG0462314 PrsA Phosphoribosylpyrophosphate synthetase [Nucle 99.74
PF14572184 Pribosyl_synth: Phosphoribosyl synthetase-associat 99.73
PRK04923319 ribose-phosphate pyrophosphokinase; Provisional 99.7
PRK02269320 ribose-phosphate pyrophosphokinase; Provisional 99.67
PTZ00145439 phosphoribosylpyrophosphate synthetase; Provisiona 99.67
PRK07199301 phosphoribosylpyrophosphate synthetase; Provisiona 99.64
PRK00553332 ribose-phosphate pyrophosphokinase; Provisional 99.64
PLN02297326 ribose-phosphate pyrophosphokinase 99.6
PRK02458323 ribose-phosphate pyrophosphokinase; Provisional 99.6
PRK03092304 ribose-phosphate pyrophosphokinase; Provisional 99.57
PRK00934285 ribose-phosphate pyrophosphokinase; Provisional 99.56
PRK06827382 phosphoribosylpyrophosphate synthetase; Provisiona 99.52
PRK01259309 ribose-phosphate pyrophosphokinase; Provisional 99.51
KOG1448316 consensus Ribose-phosphate pyrophosphokinase [Nucl 99.5
PRK02812330 ribose-phosphate pyrophosphokinase; Provisional 99.49
PLN02369302 ribose-phosphate pyrophosphokinase 99.49
TIGR01251308 ribP_PPkin ribose-phosphate pyrophosphokinase. In 99.39
PRK09162181 hypoxanthine-guanine phosphoribosyltransferase; Pr 99.24
TIGR00201190 comF comF family protein. This protein is found in 99.24
PRK11595227 DNA utilization protein GntX; Provisional 99.09
TIGR01203166 HGPRTase hypoxanthine phosphoribosyltransferase. S 99.09
PRK05205176 bifunctional pyrimidine regulatory protein PyrR ur 99.06
KOG1503354 consensus Phosphoribosylpyrophosphate synthetase-a 99.05
PF00156125 Pribosyltran: Phosphoribosyl transferase domain; I 98.96
COG0634178 Hpt Hypoxanthine-guanine phosphoribosyltransferase 98.95
PLN02238189 hypoxanthine phosphoribosyltransferase 98.94
COG1040225 ComFC Predicted amidophosphoribosyltransferases [G 98.93
PRK15423178 hypoxanthine phosphoribosyltransferase; Provisiona 98.91
PTZ00149241 hypoxanthine phosphoribosyltransferase; Provisiona 98.85
COG0461201 PyrE Orotate phosphoribosyltransferase [Nucleotide 98.85
PRK13812176 orotate phosphoribosyltransferase; Provisional 98.84
PTZ00271211 hypoxanthine-guanine phosphoribosyltransferase; Pr 98.81
PRK13811170 orotate phosphoribosyltransferase; Provisional 98.79
PRK13809206 orotate phosphoribosyltransferase; Provisional 98.76
TIGR01367187 pyrE_Therm orotate phosphoribosyltransferase, Ther 98.75
TIGR01090169 apt adenine phosphoribosyltransferase. A phylogene 98.71
PRK07322178 adenine phosphoribosyltransferase; Provisional 98.71
PRK02277200 orotate phosphoribosyltransferase-like protein; Pr 98.71
PRK00455202 pyrE orotate phosphoribosyltransferase; Validated 98.7
PLN02293187 adenine phosphoribosyltransferase 98.67
PRK06031233 phosphoribosyltransferase; Provisional 98.67
PRK02304175 adenine phosphoribosyltransferase; Provisional 98.66
COG0856203 Orotate phosphoribosyltransferase homologs [Nucleo 98.59
PRK00129209 upp uracil phosphoribosyltransferase; Reviewed 98.58
TIGR01091207 upp uracil phosphoribosyltransferase. that include 98.54
TIGR00336173 pyrE orotate phosphoribosyltransferase. The conser 98.51
PRK12560187 adenine phosphoribosyltransferase; Provisional 98.5
KOG3367216 consensus Hypoxanthine-guanine phosphoribosyltrans 98.45
PRK13810187 orotate phosphoribosyltransferase; Provisional 98.42
TIGR01744191 XPRTase xanthine phosphoribosyltransferase. This m 98.41
PRK09219189 xanthine phosphoribosyltransferase; Validated 98.38
PRK05500477 bifunctional orotidine 5'-phosphate decarboxylase/ 98.33
PRK08558238 adenine phosphoribosyltransferase; Provisional 98.29
COG0503179 Apt Adenine/guanine phosphoribosyltransferases and 98.16
COG1926220 Predicted phosphoribosyltransferases [General func 98.13
TIGR01743268 purR_Bsub pur operon repressor, Bacillus subtilis 98.12
PRK09213271 pur operon repressor; Provisional 98.09
PRK09177156 xanthine-guanine phosphoribosyltransferase; Valida 98.08
COG2065179 PyrR Pyrimidine operon attenuation protein/uracil 98.06
COG2236192 Predicted phosphoribosyltransferases [General func 98.04
KOG1712183 consensus Adenine phosphoribosyl transferases [Nuc 97.91
PLN02541244 uracil phosphoribosyltransferase 97.45
COG0035210 Upp Uracil phosphoribosyltransferase [Nucleotide t 96.97
PF14681207 UPRTase: Uracil phosphoribosyltransferase; PDB: 1V 96.83
PF15609191 PRTase_2: Phosphoribosyl transferase 96.29
PF15610274 PRTase_3: PRTase ComF-like 91.68
KOG1017267 consensus Predicted uracil phosphoribosyltransfera 90.54
>COG0034 PurF Glutamine phosphoribosylpyrophosphate amidotransferase [Nucleotide transport and metabolism] Back     alignment and domain information
Probab=100.00  E-value=4.5e-37  Score=267.63  Aligned_cols=145  Identities=57%  Similarity=0.992  Sum_probs=140.0

Q ss_pred             CCCCccccceeeCCChhhhcccCceeeccccccCCCCEEEEEeccccccHHHHHHHHHHHHcCCcEEEEEeecCCceecc
Q 045545            1 MNTTRYEHETFIEPSQKIRDFGVKLKLSPVTGVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMRIASPPIIASC   80 (158)
Q Consensus         1 ~~~n~~~~r~~~~~~~k~R~~~~~~~~~~~~~~v~gk~vliVDDvi~TG~Tl~~~~~~L~~~Ga~~V~v~v~~~~~~~~~   80 (158)
                      ++||||+||+|++|+|..|...+++|++++...++||+|+||||.|.+|+|+...+++||++||++||+.+++||+.+||
T Consensus       313 liKNrYvgRTFI~P~q~~R~~~Vr~KLnpvr~~v~GKrVvlVDDSIVRGTTsr~IV~mlReAGAkEVHvriasP~i~~Pc  392 (470)
T COG0034         313 LIKNRYVGRTFIMPTQELREKGVRLKLNPVREVVKGKRVVLVDDSIVRGTTSRRIVQMLREAGAKEVHVRIASPPIRYPC  392 (470)
T ss_pred             cccccccceeeeCCcHHHHHhhhhhhcCchHHHhCCCeEEEEccccccCccHHHHHHHHHHhCCCEEEEEecCCCccCCC
Confidence            68999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eeeecCCCHHHHHhcCccchhhheeeccCcccccChHHHHHHhcCCCCCcccccccCcCCcCcch
Q 045545           81 YYGVDTPSSEELISNRMSVEEIREFIGCDSLAFLLIDSLNKMLGDDSQNFCYACFSGKYPVKPEE  145 (158)
Q Consensus        81 ~~gi~~~~~~eli~~~~~~~~i~~~i~tdsi~~~sl~~l~~~~~~~~~~~~~~cf~~~y~~~~~~  145 (158)
                      +||+++++..|+|+++.+.++|++.||+||+.|+|+++|.++++....++|.+||+|+||+...+
T Consensus       393 ~YGID~pt~~eLIA~~~~~eeI~~~IgaDSL~yLslegL~~aig~~~~~~c~~cFtG~Yp~~~~~  457 (470)
T COG0034         393 FYGIDMPTREELIAANRTVEEIRKAIGADSLAYLSLEGLIKAIGRDNNDFCLACFTGEYPTGLPD  457 (470)
T ss_pred             ccccCCCCHHHHhhCCCCHHHHHHHhCCCceeeecHHHHHHHhCCCccceeeEEecCccccCCcc
Confidence            99999999999999999999999999999999999999999998754689999999999999664



>PRK06388 amidophosphoribosyltransferase; Provisional Back     alignment and domain information
>PRK06781 amidophosphoribosyltransferase; Provisional Back     alignment and domain information
>PRK07631 amidophosphoribosyltransferase; Provisional Back     alignment and domain information
>PRK07349 amidophosphoribosyltransferase; Provisional Back     alignment and domain information
>KOG0572 consensus Glutamine phosphoribosylpyrophosphate amidotransferase [Nucleotide transport and metabolism] Back     alignment and domain information
>PRK07847 amidophosphoribosyltransferase; Provisional Back     alignment and domain information
>PRK09246 amidophosphoribosyltransferase; Provisional Back     alignment and domain information
>PRK08341 amidophosphoribosyltransferase; Provisional Back     alignment and domain information
>PRK07272 amidophosphoribosyltransferase; Provisional Back     alignment and domain information
>PLN02440 amidophosphoribosyltransferase Back     alignment and domain information
>PRK05793 amidophosphoribosyltransferase; Provisional Back     alignment and domain information
>TIGR01134 purF amidophosphoribosyltransferase Back     alignment and domain information
>PRK09123 amidophosphoribosyltransferase; Provisional Back     alignment and domain information
>PRK08525 amidophosphoribosyltransferase; Provisional Back     alignment and domain information
>COG0462 PrsA Phosphoribosylpyrophosphate synthetase [Nucleotide transport and metabolism / Amino acid transport and metabolism] Back     alignment and domain information
>PF14572 Pribosyl_synth: Phosphoribosyl synthetase-associated domain; PDB: 2H07_B 2H06_B 3S5J_B 2HCR_A 3EFH_A 2H08_A 1DKR_B 1DKU_B 1IBS_B 2JI4_A Back     alignment and domain information
>PRK04923 ribose-phosphate pyrophosphokinase; Provisional Back     alignment and domain information
>PRK02269 ribose-phosphate pyrophosphokinase; Provisional Back     alignment and domain information
>PTZ00145 phosphoribosylpyrophosphate synthetase; Provisional Back     alignment and domain information
>PRK07199 phosphoribosylpyrophosphate synthetase; Provisional Back     alignment and domain information
>PRK00553 ribose-phosphate pyrophosphokinase; Provisional Back     alignment and domain information
>PLN02297 ribose-phosphate pyrophosphokinase Back     alignment and domain information
>PRK02458 ribose-phosphate pyrophosphokinase; Provisional Back     alignment and domain information
>PRK03092 ribose-phosphate pyrophosphokinase; Provisional Back     alignment and domain information
>PRK00934 ribose-phosphate pyrophosphokinase; Provisional Back     alignment and domain information
>PRK06827 phosphoribosylpyrophosphate synthetase; Provisional Back     alignment and domain information
>PRK01259 ribose-phosphate pyrophosphokinase; Provisional Back     alignment and domain information
>KOG1448 consensus Ribose-phosphate pyrophosphokinase [Nucleotide transport and metabolism; Amino acid transport and metabolism] Back     alignment and domain information
>PRK02812 ribose-phosphate pyrophosphokinase; Provisional Back     alignment and domain information
>PLN02369 ribose-phosphate pyrophosphokinase Back     alignment and domain information
>TIGR01251 ribP_PPkin ribose-phosphate pyrophosphokinase Back     alignment and domain information
>PRK09162 hypoxanthine-guanine phosphoribosyltransferase; Provisional Back     alignment and domain information
>TIGR00201 comF comF family protein Back     alignment and domain information
>PRK11595 DNA utilization protein GntX; Provisional Back     alignment and domain information
>TIGR01203 HGPRTase hypoxanthine phosphoribosyltransferase Back     alignment and domain information
>PRK05205 bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase; Provisional Back     alignment and domain information
>KOG1503 consensus Phosphoribosylpyrophosphate synthetase-associated protein [Amino acid transport and metabolism; Nucleotide transport and metabolism] Back     alignment and domain information
>PF00156 Pribosyltran: Phosphoribosyl transferase domain; InterPro: IPR000836 The name PRT comes from phosphoribosyltransferase (PRTase) enzymes, which carry out phosphoryl transfer reactions on 5-phosphoribosyl-alpha1-pyrophosphate PRPP, an activated form of ribose-5-phosphate Back     alignment and domain information
>COG0634 Hpt Hypoxanthine-guanine phosphoribosyltransferase [Nucleotide transport and metabolism] Back     alignment and domain information
>PLN02238 hypoxanthine phosphoribosyltransferase Back     alignment and domain information
>COG1040 ComFC Predicted amidophosphoribosyltransferases [General function prediction only] Back     alignment and domain information
>PRK15423 hypoxanthine phosphoribosyltransferase; Provisional Back     alignment and domain information
>PTZ00149 hypoxanthine phosphoribosyltransferase; Provisional Back     alignment and domain information
>COG0461 PyrE Orotate phosphoribosyltransferase [Nucleotide transport and metabolism] Back     alignment and domain information
>PRK13812 orotate phosphoribosyltransferase; Provisional Back     alignment and domain information
>PTZ00271 hypoxanthine-guanine phosphoribosyltransferase; Provisional Back     alignment and domain information
>PRK13811 orotate phosphoribosyltransferase; Provisional Back     alignment and domain information
>PRK13809 orotate phosphoribosyltransferase; Provisional Back     alignment and domain information
>TIGR01367 pyrE_Therm orotate phosphoribosyltransferase, Thermus family Back     alignment and domain information
>TIGR01090 apt adenine phosphoribosyltransferase Back     alignment and domain information
>PRK07322 adenine phosphoribosyltransferase; Provisional Back     alignment and domain information
>PRK02277 orotate phosphoribosyltransferase-like protein; Provisional Back     alignment and domain information
>PRK00455 pyrE orotate phosphoribosyltransferase; Validated Back     alignment and domain information
>PLN02293 adenine phosphoribosyltransferase Back     alignment and domain information
>PRK06031 phosphoribosyltransferase; Provisional Back     alignment and domain information
>PRK02304 adenine phosphoribosyltransferase; Provisional Back     alignment and domain information
>COG0856 Orotate phosphoribosyltransferase homologs [Nucleotide transport and metabolism] Back     alignment and domain information
>PRK00129 upp uracil phosphoribosyltransferase; Reviewed Back     alignment and domain information
>TIGR01091 upp uracil phosphoribosyltransferase Back     alignment and domain information
>TIGR00336 pyrE orotate phosphoribosyltransferase Back     alignment and domain information
>PRK12560 adenine phosphoribosyltransferase; Provisional Back     alignment and domain information
>KOG3367 consensus Hypoxanthine-guanine phosphoribosyltransferase [Nucleotide transport and metabolism] Back     alignment and domain information
>PRK13810 orotate phosphoribosyltransferase; Provisional Back     alignment and domain information
>TIGR01744 XPRTase xanthine phosphoribosyltransferase Back     alignment and domain information
>PRK09219 xanthine phosphoribosyltransferase; Validated Back     alignment and domain information
>PRK05500 bifunctional orotidine 5'-phosphate decarboxylase/orotate phosphoribosyltransferase protein; Validated Back     alignment and domain information
>PRK08558 adenine phosphoribosyltransferase; Provisional Back     alignment and domain information
>COG0503 Apt Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins [Nucleotide transport and metabolism] Back     alignment and domain information
>COG1926 Predicted phosphoribosyltransferases [General function prediction only] Back     alignment and domain information
>TIGR01743 purR_Bsub pur operon repressor, Bacillus subtilis type Back     alignment and domain information
>PRK09213 pur operon repressor; Provisional Back     alignment and domain information
>PRK09177 xanthine-guanine phosphoribosyltransferase; Validated Back     alignment and domain information
>COG2065 PyrR Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase [Nucleotide transport and metabolism] Back     alignment and domain information
>COG2236 Predicted phosphoribosyltransferases [General function prediction only] Back     alignment and domain information
>KOG1712 consensus Adenine phosphoribosyl transferases [Nucleotide transport and metabolism] Back     alignment and domain information
>PLN02541 uracil phosphoribosyltransferase Back     alignment and domain information
>COG0035 Upp Uracil phosphoribosyltransferase [Nucleotide transport and metabolism] Back     alignment and domain information
>PF14681 UPRTase: Uracil phosphoribosyltransferase; PDB: 1V9S_B 1UPF_A 1UPU_D 1JLR_B 1BD4_A 1BD3_C 1JLS_D 1XTV_C 1XTU_H 3G6W_C Back     alignment and domain information
>PF15609 PRTase_2: Phosphoribosyl transferase Back     alignment and domain information
>PF15610 PRTase_3: PRTase ComF-like Back     alignment and domain information
>KOG1017 consensus Predicted uracil phosphoribosyltransferase [General function prediction only] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query158
1ao0_A459 Glutamine Phosphoribosylpyrophosphate (Prpp) Amidot 3e-43
1gph_1465 Structure Of The Allosteric Regulatory Enzyme Of Pu 7e-43
1ecf_A504 Escherichia Coli Glutamine Phosphoribosylpyrophosph 2e-23
>pdb|1AO0|A Chain A, Glutamine Phosphoribosylpyrophosphate (Prpp) Amidotransferase From B. Subtilis Complexed With Adp And Gmp Length = 459 Back     alignment and structure

Iteration: 1

Score = 170 bits (431), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 84/143 (58%), Positives = 110/143 (76%), Gaps = 4/143 (2%) Query: 4 TRYEHETFIEPSQKIRDFGVKLKLSPVTGVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAG 63 RY TFI+PSQ +R+ GV++KLS V GV+EGKRVV+VDDSIVRGTTS +IV +L+EAG Sbjct: 306 NRYVGRTFIQPSQALREQGVRMKLSAVRGVVEGKRVVMVDDSIVRGTTSRRIVTMLREAG 365 Query: 64 AKEVHMRIASPPIIASCYYGVDTPSSEELISNRMSVEEIREFIGCDSLAFLLIDSLNKML 123 A EVH++I+SPPI C+YG+DT + EELI++ SVEEIR+ IG D+L+FL ++ L K + Sbjct: 366 ATEVHVKISSPPIAHPCFYGIDTSTHEELIASSHSVEEIRQEIGADTLSFLSVEGLLKGI 425 Query: 124 G---DDSQ-NFCYACFSGKYPVK 142 G DDS C ACF+GKYP + Sbjct: 426 GRKYDDSNCGQCLACFTGKYPTE 448
>pdb|1GPH|1 Chain 1, Structure Of The Allosteric Regulatory Enzyme Of Purine Biosynthesis Length = 465 Back     alignment and structure
>pdb|1ECF|A Chain A, Escherichia Coli Glutamine Phosphoribosylpyrophosphate (Prpp) Amidotransferase Length = 504 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query158
1ao0_A459 Glutamine phosphoribosylpyrophosphate amidotransfe 5e-90
1ecf_A504 Glutamine phosphoribosylpyrophosphate amidotransf; 1e-80
1wd5_A208 Hypothetical protein TT1426; structural genomics, 1e-05
1u9y_A284 RPPK;, ribose-phosphate pyrophosphokinase; PRPP sy 2e-05
3lrt_A286 Ribose-phosphate pyrophosphokinase; phosphoribosyl 2e-05
2ps1_A226 Orotate phosphoribosyltransferase 1; alpha beta, o 2e-04
1dku_A317 Protein (phosphoribosyl pyrophosphate synthetase); 2e-04
3mjd_A232 Orotate phosphoribosyltransferase; IDP02311, csgid 3e-04
1vdm_A153 Purine phosphoribosyltransferase; structural genom 3e-04
2xbu_A221 Hypoxanthine-guanine phosphoribosyltransferase; gl 6e-04
>1ao0_A Glutamine phosphoribosylpyrophosphate amidotransferase; glutamine amidotransferase, prtase, purine biosynthesis, phosphoribosyltransferase; HET: 5GP ADP; 2.80A {Bacillus subtilis} SCOP: c.61.1.1 d.153.1.1 PDB: 1gph_1* Length = 459 Back     alignment and structure
 Score =  268 bits (688), Expect = 5e-90
 Identities = 82/152 (53%), Positives = 112/152 (73%), Gaps = 5/152 (3%)

Query: 5   RYEHETFIEPSQKIRDFGVKLKLSPVTGVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGA 64
           RY   TFI+PSQ +R+ GV++KLS V GV+EGKRVV+VDDSIVRGTTS +IV +L+EAGA
Sbjct: 307 RYVGRTFIQPSQALREQGVRMKLSAVRGVVEGKRVVMVDDSIVRGTTSRRIVTMLREAGA 366

Query: 65  KEVHMRIASPPIIASCYYGVDTPSSEELISNRMSVEEIREFIGCDSLAFLLIDSLNKMLG 124
            EVH++I+SPPI   C+YG+DT + EELI++  SVEEIR+ IG D+L+FL ++ L K +G
Sbjct: 367 TEVHVKISSPPIAHPCFYGIDTSTHEELIASSHSVEEIRQEIGADTLSFLSVEGLLKGIG 426

Query: 125 DDSQN----FCYACFSGKYPVK-PEEMKVKRV 151
               +     C ACF+GKYP +  ++  +  V
Sbjct: 427 RKYDDSNCGQCLACFTGKYPTEIYQDTVLPHV 458


>1ecf_A Glutamine phosphoribosylpyrophosphate amidotransf; purine biosynthesis, transferase, glycosyltransferase, gluta amidotransferase; HET: PIN; 2.00A {Escherichia coli} SCOP: c.61.1.1 d.153.1.1 PDB: 1ecb_A* 1ecc_A* 1ecg_A* 1ecj_A* Length = 504 Back     alignment and structure
>1wd5_A Hypothetical protein TT1426; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; HET: MES; 2.00A {Thermus thermophilus} SCOP: c.61.1.1 Length = 208 Back     alignment and structure
>1u9y_A RPPK;, ribose-phosphate pyrophosphokinase; PRPP synthase, transferase; 2.65A {Methanocaldococcus jannaschii} SCOP: c.61.1.2 c.61.1.2 PDB: 1u9z_A* Length = 284 Back     alignment and structure
>3lrt_A Ribose-phosphate pyrophosphokinase; phosphoribosyl transferase, ATP analog binding, ATP-binding, metal-binding, nucleotide biosynthesis; HET: ADP; 1.53A {Thermoplasma volcanium} PDB: 3lpn_A* 3nag_A* 3mbi_A* Length = 286 Back     alignment and structure
>2ps1_A Orotate phosphoribosyltransferase 1; alpha beta, oprtase-OA-PRPP complex; HET: ORO PRP; 1.75A {Saccharomyces cerevisiae} PDB: 2pry_A* 2prz_A* Length = 226 Back     alignment and structure
>1dku_A Protein (phosphoribosyl pyrophosphate synthetase); open alpha-beta structure, domain duplication, phosphoribosyltransferase type I fold; HET: AP2 ABM; 2.20A {Bacillus subtilis} SCOP: c.61.1.2 c.61.1.2 PDB: 1dkr_A* 1ibs_A* Length = 317 Back     alignment and structure
>3mjd_A Orotate phosphoribosyltransferase; IDP02311, csgid, structural genomics, center for structural genomics of infectious diseases; 1.90A {Francisella tularensis} Length = 232 Back     alignment and structure
>1vdm_A Purine phosphoribosyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Pyrococcus horikoshii} SCOP: c.61.1.1 Length = 153 Back     alignment and structure
>2xbu_A Hypoxanthine-guanine phosphoribosyltransferase; glycosyltransferase, purine salvage, FLIP pepti; HET: 5GP; 1.80A {Saccharomyces cerevisiae} PDB: 2jkz_A* 2jky_A* Length = 221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query158
1ecf_A504 Glutamine phosphoribosylpyrophosphate amidotransf; 99.96
1ao0_A459 Glutamine phosphoribosylpyrophosphate amidotransfe 99.96
3lrt_A286 Ribose-phosphate pyrophosphokinase; phosphoribosyl 99.6
3dah_A319 Ribose-phosphate pyrophosphokinase; pyrophosphoki 99.6
1dku_A317 Protein (phosphoribosyl pyrophosphate synthetase); 99.6
3s5j_B326 Ribose-phosphate pyrophosphokinase 1; nucleotide s 99.58
1u9y_A284 RPPK;, ribose-phosphate pyrophosphokinase; PRPP sy 99.57
2ji4_A379 Phosphoribosyl pyrophosphate synthetase-associated 99.48
1a3c_A181 PYRR, pyrimidine operon regulatory protein PYRR; t 99.26
1vdm_A153 Purine phosphoribosyltransferase; structural genom 99.22
1ufr_A181 TT1027, PYR mRNA-binding attenuation protein; pyri 99.19
1wd5_A208 Hypothetical protein TT1426; structural genomics, 99.16
1tc1_A220 Protein (hypoxanthine phosphoribosyltransferase); 99.16
1pzm_A211 HGPRT, hypoxanthine-guanine phosphoribosyltransfer 99.11
1hgx_A183 HGXPRTASE, hypoxanthine-guanine-xanthine phosphori 99.11
1w30_A201 PYRR bifunctional protein; transferase, glycosyltr 99.1
2geb_A185 Hypoxanthine-guanine phosphoribosyltransferase; HG 99.09
3o7m_A186 Hypoxanthine phosphoribosyltransferase; hypoxanthi 99.07
2jbh_A225 Phosphoribosyltransferase domain-containing prote; 99.07
2ywu_A181 Hypoxanthine-guanine phosphoribosyltransferase; ro 99.06
1yfz_A205 Hypoxanthine-guanine phosphoribosyltransferase; pr 99.06
2yzk_A178 OPRT, oprtase, orotate phosphoribosyltransferase; 99.05
1fsg_A233 HGPRTASE, hypoxanthine-guanine phosphoribosyltrans 99.04
3ohp_A177 Hypoxanthine phosphoribosyltransferase; structural 99.03
3hvu_A204 Hypoxanthine phosphoribosyltransferase; hypoxanthi 99.03
3m3h_A234 OPRT, oprtase, orotate phosphoribosyltransferase; 99.02
3dez_A243 OPRT, oprtase, orotate phosphoribosyltransferase; 99.01
1y0b_A197 Xanthine phosphoribosyltransferase; purine metabol 99.01
1zn8_A180 APRT, adenine phosphoribosyltransferase; glycosylt 98.99
2wns_A205 Orotate phosphoribosyltransferase; alternative spl 98.97
1i5e_A209 Uracil phosphoribosyltransferase; salvage pathway; 98.95
1vch_A175 Phosphoribosyltransferase-related protein; structu 98.94
1z7g_A217 HGPRT, HGPRTASE, hypoxanthine-guanine phosphoribos 98.94
3acd_A181 Hypoxanthine-guanine phosphoribosyltransferase; ro 98.91
2aee_A211 OPRT, oprtase, orotate phosphoribosyltransferase; 98.88
3ozf_A250 Hypoxanthine-guanine-xanthine phosphoribosyltrans; 98.87
1qb7_A236 APRT, adenine phosphoribosyltransferase; dinucleot 98.84
1g2q_A187 Adenine phosphoribosyltransferase 1; dimer, single 98.84
2dy0_A190 APRT, adenine phosphoribosyltransferase; structura 98.84
2p1z_A180 Phosphoribosyltransferase; STRU genomics, PSI-2, p 98.83
2ps1_A226 Orotate phosphoribosyltransferase 1; alpha beta, o 98.82
1o5o_A221 Uracil phosphoribosyltransferase; TM0721, structur 98.81
1l1q_A186 Adenine phosphoribosyltransferase; aprtase, giardi 98.79
2e55_A208 Uracil phosphoribosyltransferase; structural genom 98.75
2xbu_A221 Hypoxanthine-guanine phosphoribosyltransferase; gl 98.73
2ehj_A208 Uracil phosphoribosyltransferase; structural genom 98.69
1v9s_A208 Uracil phosphoribosyltransferase; pyrimidine salva 98.68
3mjd_A232 Orotate phosphoribosyltransferase; IDP02311, csgid 98.66
1lh0_A213 OMP synthase; loop closure, monomer closure, orota 98.62
3n2l_A238 OPRT, oprtase, orotate phosphoribosyltransferase; 98.58
1o57_A291 PUR operon repressor; purine operon repressor, hel 98.57
3qw4_B453 UMP synthase; N-terminal orotidine monophosphate d 98.51
1bd3_D243 Uprtase, uracil phosphoribosyltransferase; glycosy 98.48
1nul_A152 XPRT, xanthine-guanine phosphoribosyltransferase; 98.46
1dqn_A230 Guanine phosphoribosyltransferase; protein-inhibit 98.26
3dmp_A217 Uracil phosphoribosyltransferase; structural genom 98.18
1xtt_A216 Probable uracil phosphoribosyltransferase; tetrame 97.88
2k5c_A95 Uncharacterized protein PF0385; structural genomic 86.22
>1ecf_A Glutamine phosphoribosylpyrophosphate amidotransf; purine biosynthesis, transferase, glycosyltransferase, gluta amidotransferase; HET: PIN; 2.00A {Escherichia coli} SCOP: c.61.1.1 d.153.1.1 PDB: 1ecb_A* 1ecc_A* 1ecg_A* 1ecj_A* Back     alignment and structure
Probab=99.96  E-value=1.1e-29  Score=224.62  Aligned_cols=151  Identities=38%  Similarity=0.585  Sum_probs=136.1

Q ss_pred             CCCccccceeeCCChhhhcccCceeeccccccCCCCEEEEEeccccccHHHHHHHHHHHHcCCcEEEEEeecCCceecce
Q 045545            2 NTTRYEHETFIEPSQKIRDFGVKLKLSPVTGVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMRIASPPIIASCY   81 (158)
Q Consensus         2 ~~n~~~~r~~~~~~~k~R~~~~~~~~~~~~~~v~gk~vliVDDvi~TG~Tl~~~~~~L~~~Ga~~V~v~v~~~~~~~~~~   81 (158)
                      +||+|.+|+++++++.+|..+++.++.+..++++||+||||||+++||+|+.++++.|+++||++|++++++||+..||+
T Consensus       325 ~k~r~~~~t~i~~~~~~R~~~v~~~~~~~~~~v~Gk~VllVDDii~TG~Tl~~~~~~L~~~Ga~~V~~~~l~~~~~~p~~  404 (504)
T 1ecf_A          325 VKNRYVGRTFIMPGQQLRRKSVRRKLNANRAEFRDKNVLLVDDSIVRGTTSEQIIEMAREAGAKKVYLASAAPEIRFPNV  404 (504)
T ss_dssp             EECSCCCCCCCCSSSCCCCCCSTTTEEECGGGTTTCCEEEEESCCSSSHHHHHHHHHHHHTTCSSEEEEESSCCCCSCCC
T ss_pred             EEecccCCceeCccHHHHHHHHHhhhccccccCCCCeEEEEeccccccHHHHHHHHHHHhcCCcEEEEEEEecCcccCCe
Confidence            68999999999988888877776666555678999999999999999999999999999999999999999999999999


Q ss_pred             eeecCCCHHHHHhcCccchhhheeeccCcccccChHHHHHHhcCCC---CCcccccccCcCCcC-cchhhhhhcc
Q 045545           82 YGVDTPSSEELISNRMSVEEIREFIGCDSLAFLLIDSLNKMLGDDS---QNFCYACFSGKYPVK-PEEMKVKRVG  152 (158)
Q Consensus        82 ~gi~~~~~~eli~~~~~~~~i~~~i~tdsi~~~sl~~l~~~~~~~~---~~~~~~cf~~~y~~~-~~~~~~~~~~  152 (158)
                      +|++.++..+++..+.+.+++.+.++.|++.++|+++|+++++...   .++|++||+|+||++ +++.+++.|.
T Consensus       405 ~gi~~~~~~~lv~~~~~~~e~~~~~~~~~l~~~s~~~l~~~~~~~~~~~~~~~~~cf~g~y~~~~~~~~~~~~~~  479 (504)
T 1ecf_A          405 YGIDMPSATELIAHGREVDEIRQIIGADGLIFQDLNDLIDAVRAENPDIQQFECSVFNGVYVTKDVDQGYLDFLD  479 (504)
T ss_dssp             SSCCCCCGGGCTTTTCCHHHHHHHHTCSEEEECCHHHHHHHHHTTCTTCCCCBCHHHHCCCTTSCCCHHHHHHHH
T ss_pred             EEEEcCChHHeEEcCCCHHHHHHHcCCCEEEEEcHHHHHHHhccCCCccCCccceeCCCCCcCCCCCHHHHHHHH
Confidence            9999999889998888878899999999999999999999997642   379999999999999 8887776654



>1ao0_A Glutamine phosphoribosylpyrophosphate amidotransferase; glutamine amidotransferase, prtase, purine biosynthesis, phosphoribosyltransferase; HET: 5GP ADP; 2.80A {Bacillus subtilis} SCOP: c.61.1.1 d.153.1.1 PDB: 1gph_1* Back     alignment and structure
>3lrt_A Ribose-phosphate pyrophosphokinase; phosphoribosyl transferase, ATP analog binding, ATP-binding, metal-binding, nucleotide biosynthesis; HET: ADP; 1.53A {Thermoplasma volcanium} PDB: 3lpn_A* 3nag_A* 3mbi_A* Back     alignment and structure
>3dah_A Ribose-phosphate pyrophosphokinase; pyrophosphoki seattle structural genomics center for infectious disease, magnesium, metal binding; HET: AMP; 2.30A {Burkholderia pseudomallei} Back     alignment and structure
>1dku_A Protein (phosphoribosyl pyrophosphate synthetase); open alpha-beta structure, domain duplication, phosphoribosyltransferase type I fold; HET: AP2 ABM; 2.20A {Bacillus subtilis} SCOP: c.61.1.2 c.61.1.2 PDB: 1dkr_A* 1ibs_A* Back     alignment and structure
>3s5j_B Ribose-phosphate pyrophosphokinase 1; nucleotide synthesis, transferase; 2.02A {Homo sapiens} PDB: 2hcr_A* 3efh_A 2h06_A 2h07_A 2h08_A Back     alignment and structure
>1u9y_A RPPK;, ribose-phosphate pyrophosphokinase; PRPP synthase, transferase; 2.65A {Methanocaldococcus jannaschii} SCOP: c.61.1.2 c.61.1.2 PDB: 1u9z_A* Back     alignment and structure
>2ji4_A Phosphoribosyl pyrophosphate synthetase-associated protein 2; phosphorylation, nucleotide biosynthesis, transferase; 2.55A {Homo sapiens} PDB: 2c4k_A* Back     alignment and structure
>1a3c_A PYRR, pyrimidine operon regulatory protein PYRR; transcription regulation, attenuation protein, RNA-binding P pyrimidine biosynthesis; 1.60A {Bacillus subtilis} SCOP: c.61.1.1 PDB: 1a4x_A 2igb_A* 1xz8_A* 1non_A 1xzn_A* Back     alignment and structure
>1vdm_A Purine phosphoribosyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Pyrococcus horikoshii} SCOP: c.61.1.1 Back     alignment and structure
>1ufr_A TT1027, PYR mRNA-binding attenuation protein; pyrimidine nucleotide biosynthesis, transcriptional attenuation, RNA-binding protein; 2.60A {Thermus thermophilus} SCOP: c.61.1.1 Back     alignment and structure
>1wd5_A Hypothetical protein TT1426; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; HET: MES; 2.00A {Thermus thermophilus} SCOP: c.61.1.1 Back     alignment and structure
>1tc1_A Protein (hypoxanthine phosphoribosyltransferase); transferase,phosphoribosyltransferase, purine salvage, nucleotide metabolism; HET: FMB MES; 1.41A {Trypanosoma cruzi} SCOP: c.61.1.1 PDB: 1tc2_A* 1p19_A* 1p18_A* 1p17_A* 1i0l_A* 1i14_A* 1i0i_A* 1i13_A* Back     alignment and structure
>1pzm_A HGPRT, hypoxanthine-guanine phosphoribosyltransferase; HET: 5GP; 2.10A {Leishmania tarentolae} SCOP: c.61.1.1 Back     alignment and structure
>1hgx_A HGXPRTASE, hypoxanthine-guanine-xanthine phosphoribosyltransferase; glycosyltransferase, purine salvage, transferase (glycosyltransferase); HET: 5GP; 1.90A {Tritrichomonas foetus} SCOP: c.61.1.1 Back     alignment and structure
>1w30_A PYRR bifunctional protein; transferase, glycosyltransferase, PSI, protein structure initiative, TB structural genomics consortium, TB; 1.9A {Mycobacterium tuberculosis} SCOP: c.61.1.1 Back     alignment and structure
>2geb_A Hypoxanthine-guanine phosphoribosyltransferase; HGPRT, mutant, inhibitor design, selectivity; 1.70A {Thermoanaerobacter tengcongensis} Back     alignment and structure
>3o7m_A Hypoxanthine phosphoribosyltransferase; hypoxanthine-guanine phosphoribosyltransferase, salvage of nucleosides and nucleotides; HET: GOL; 1.98A {Bacillus anthracis} SCOP: c.61.1.0 Back     alignment and structure
>2jbh_A Phosphoribosyltransferase domain-containing prote; glycosyltransferase, purine salvage; HET: 5GP; 1.7A {Homo sapiens} Back     alignment and structure
>1yfz_A Hypoxanthine-guanine phosphoribosyltransferase; protein-nucleotide complex; HET: IMP; 2.20A {Thermoanaerobacter tengcongensis} SCOP: c.61.1.1 PDB: 1r3u_A* Back     alignment and structure
>2yzk_A OPRT, oprtase, orotate phosphoribosyltransferase; rossmann fold, glycosyltransferase, magnesium, pyrimidine biosynthesis, structural genomics; 1.80A {Aeropyrum pernix} Back     alignment and structure
>1fsg_A HGPRTASE, hypoxanthine-guanine phosphoribosyltransferase; glycosyltransferase, purine salvage; HET: PRP 9DG; 1.05A {Toxoplasma gondii} SCOP: c.61.1.1 PDB: 1qk3_A* 1qk4_A* 1qk5_A* 1dbr_A Back     alignment and structure
>3ohp_A Hypoxanthine phosphoribosyltransferase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Vibrio cholerae} SCOP: c.61.1.1 PDB: 1g9s_A* 1g9t_A* 1grv_A 1j7j_A Back     alignment and structure
>3hvu_A Hypoxanthine phosphoribosyltransferase; hypoxanthine-guanine phosphoribosyltransferase, 2-(N-morphol ethanesulfonic acid (MES), IDP01892; HET: MES; 1.95A {Bacillus anthracis str} PDB: 3h83_A* 3kb8_A* Back     alignment and structure
>3m3h_A OPRT, oprtase, orotate phosphoribosyltransferase; pyrimidine ribonucleotide biosynthesis, structural genomics, infectious diseases; 1.75A {Bacillus anthracis} PDB: 3osc_A* Back     alignment and structure
>3dez_A OPRT, oprtase, orotate phosphoribosyltransferase; glycosyltransferase, MAGN pyrimidine biosynthesis; 2.40A {Streptococcus mutans} Back     alignment and structure
>1y0b_A Xanthine phosphoribosyltransferase; purine metabolism, STRU genomics, PSI, protein structure initative, midwest center structural genomics; HET: G4P; 1.80A {Bacillus subtilis} SCOP: c.61.1.1 PDB: 2fxv_A* Back     alignment and structure
>1zn8_A APRT, adenine phosphoribosyltransferase; glycosyltransferase, purine salvage; HET: AMP; 1.76A {Homo sapiens} SCOP: c.61.1.1 PDB: 1ore_A* 1zn7_A* 1zn9_A* Back     alignment and structure
>2wns_A Orotate phosphoribosyltransferase; alternative splicing, multifunctional enzyme, lyase, polymorphism, decarboxylase, phosphoprotein; HET: OMP; 1.90A {Homo sapiens} Back     alignment and structure
>1i5e_A Uracil phosphoribosyltransferase; salvage pathway; HET: U5P; 3.00A {Bacillus caldolyticus} SCOP: c.61.1.1 Back     alignment and structure
>1vch_A Phosphoribosyltransferase-related protein; structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.94A {Thermus thermophilus} SCOP: c.61.1.1 Back     alignment and structure
>1z7g_A HGPRT, HGPRTASE, hypoxanthine-guanine phosphoribosyltransferase; flexibility, trans CIS peptide bond isomerization, nucleotide binding; 1.90A {Homo sapiens} SCOP: c.61.1.1 PDB: 1hmp_A* 1bzy_A 3gep_A* 3ggc_A* 3ggj_A* 1d6n_A* 2vfa_A* Back     alignment and structure
>3acd_A Hypoxanthine-guanine phosphoribosyltransferase; rossmann fold, structural genomics, NPPSFA; HET: IMP; 1.89A {Thermus thermophilus} PDB: 3acc_A* 3acb_A* Back     alignment and structure
>2aee_A OPRT, oprtase, orotate phosphoribosyltransferase; structural genomics, PSI, structure initiative; 1.95A {Streptococcus pyogenes} SCOP: c.61.1.1 Back     alignment and structure
>3ozf_A Hypoxanthine-guanine-xanthine phosphoribosyltrans; transferase-transferase inhibitor complex; HET: HPA; 1.94A {Plasmodium falciparum fcr-3} PDB: 3ozg_A* 1cjb_A* Back     alignment and structure
>1qb7_A APRT, adenine phosphoribosyltransferase; dinucleotide binding fold; HET: ADE CIT; 1.50A {Leishmania donovani} SCOP: c.61.1.1 PDB: 1qb8_A* 1qcc_A* 1qcd_A 1mzv_A* Back     alignment and structure
>1g2q_A Adenine phosphoribosyltransferase 1; dimer, single domain, catalytic loop; 1.50A {Saccharomyces cerevisiae} SCOP: c.61.1.1 PDB: 1g2p_A Back     alignment and structure
>2dy0_A APRT, adenine phosphoribosyltransferase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.25A {Escherichia coli K12} Back     alignment and structure
>2p1z_A Phosphoribosyltransferase; STRU genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; 2.44A {Corynebacterium diphtheriae} Back     alignment and structure
>2ps1_A Orotate phosphoribosyltransferase 1; alpha beta, oprtase-OA-PRPP complex; HET: ORO PRP; 1.75A {Saccharomyces cerevisiae} PDB: 2pry_A* 2prz_A* Back     alignment and structure
>1o5o_A Uracil phosphoribosyltransferase; TM0721, structural genomic PSI, protein structure initiative, joint center for structu genomics; HET: U5P; 2.30A {Thermotoga maritima} SCOP: c.61.1.1 Back     alignment and structure
>1l1q_A Adenine phosphoribosyltransferase; aprtase, giardia lamblia, purine metabolism, cataly transferase; HET: 9DA; 1.85A {Giardia intestinalis} SCOP: c.61.1.1 PDB: 1l1r_A* Back     alignment and structure
>2e55_A Uracil phosphoribosyltransferase; structural genomics; 2.15A {Aquifex aeolicus} Back     alignment and structure
>2xbu_A Hypoxanthine-guanine phosphoribosyltransferase; glycosyltransferase, purine salvage, FLIP pepti; HET: 5GP; 1.80A {Saccharomyces cerevisiae} PDB: 2jkz_A* 2jky_A* Back     alignment and structure
>2ehj_A Uracil phosphoribosyltransferase; structural genomics; 2.80A {Escherichia coli} Back     alignment and structure
>1v9s_A Uracil phosphoribosyltransferase; pyrimidine salvage, oligomerization, structural genomics, RI structural genomics/proteomics initiative; 2.10A {Thermus thermophilus} SCOP: c.61.1.1 Back     alignment and structure
>3mjd_A Orotate phosphoribosyltransferase; IDP02311, csgid, structural genomics, center for structural genomics of infectious diseases; 1.90A {Francisella tularensis} Back     alignment and structure
>1lh0_A OMP synthase; loop closure, monomer closure, orotate phosphoribosyltransferase; HET: ORO PRP; 2.00A {Salmonella typhimurium} SCOP: c.61.1.1 PDB: 1opr_A* 1sto_A* 1oro_A Back     alignment and structure
>3n2l_A OPRT, oprtase, orotate phosphoribosyltransferase; pyrimidine ribonucleotide biosynthesis, infectious diseases; 2.10A {Vibrio cholerae} Back     alignment and structure
>1o57_A PUR operon repressor; purine operon repressor, helix-turn-helix domain, phosphoribosyltranseferases, domain recombination, DNA binding; HET: EPE P6G 2PE PG4 1PE; 2.20A {Bacillus subtilis} SCOP: a.4.5.40 c.61.1.1 PDB: 1p4a_A* Back     alignment and structure
>3qw4_B UMP synthase; N-terminal orotidine monophosphate decarboxylase domain C-TE orotate phosphoribosyltransferase domain, transferase, LYAS; HET: U5P; 3.00A {Leishmania donovani} Back     alignment and structure
>1bd3_D Uprtase, uracil phosphoribosyltransferase; glycosyltransferase; 1.93A {Toxoplasma gondii} SCOP: c.61.1.1 PDB: 1bd4_D 1jlr_A* 1jls_B* 1upf_D 1upu_D* Back     alignment and structure
>1nul_A XPRT, xanthine-guanine phosphoribosyltransferase; purine salvage enzym; 1.80A {Escherichia coli} SCOP: c.61.1.1 PDB: 1a96_A* 1a95_A 1a98_A 1a97_A* Back     alignment and structure
>1dqn_A Guanine phosphoribosyltransferase; protein-inhibitor complex, Mg IONS, pyrophosphate, transition state analogue; HET: IMU; 1.75A {Giardia intestinalis} SCOP: c.61.1.1 PDB: 1dqp_A* Back     alignment and structure
>3dmp_A Uracil phosphoribosyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.60A {Burkholderia pseudomallei} SCOP: c.61.1.1 Back     alignment and structure
>1xtt_A Probable uracil phosphoribosyltransferase; tetramer, type 1 phosphoribosyltransferase, UMP complex; HET: U5P; 1.80A {Sulfolobus solfataricus} SCOP: c.61.1.1 PDB: 1vst_A* 1xtu_A* 1xtv_A* 3g6w_A* Back     alignment and structure
>2k5c_A Uncharacterized protein PF0385; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Pyrococcus furiosus} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 158
d1gph11231 c.61.1.1 (1:235-465) Glutamine PRPP amidotransfera 1e-36
d1ecfa1243 c.61.1.1 (A:250-492) Glutamine PRPP amidotransfera 3e-36
d1wd5a_208 c.61.1.1 (A:) Putative phosphoribosyltransferase T 4e-12
d1vcha1174 c.61.1.1 (A:2-175) Putative phosphoribosyltransfer 8e-08
d2c4ka2184 c.61.1.2 (A:167-350) PRPP synthetase-associated pr 8e-07
d1y0ba1191 c.61.1.1 (A:1-191) Xanthine phosphoribosyltransfer 4e-06
d1dkua2149 c.61.1.2 (A:167-315) Phosphoribosylpyrophosphate s 2e-05
>d1gph11 c.61.1.1 (1:235-465) Glutamine PRPP amidotransferase, C-terminal domain {Bacillus subtilis [TaxId: 1423]} Length = 231 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Glutamine PRPP amidotransferase, C-terminal domain
species: Bacillus subtilis [TaxId: 1423]
 Score =  123 bits (311), Expect = 1e-36
 Identities = 83/158 (52%), Positives = 115/158 (72%), Gaps = 5/158 (3%)

Query: 1   MNTTRYEHETFIEPSQKIRDFGVKLKLSPVTGVLEGKRVVVVDDSIVRGTTSSKIVRLLK 60
           +   RY   TFI+PSQ +R+ GV++KLS V GV+EGKRVV+VDDSIVRGTTS +IV +L+
Sbjct: 69  LIKNRYVGRTFIQPSQALREQGVRMKLSAVRGVVEGKRVVMVDDSIVRGTTSRRIVTMLR 128

Query: 61  EAGAKEVHMRIASPPIIASCYYGVDTPSSEELISNRMSVEEIREFIGCDSLAFLLIDSLN 120
           EAGA EVH++I+SPPI   C+YG+DT + EELI++  SV+EIR+ IG D+L+FL ++ L 
Sbjct: 129 EAGATEVHVKISSPPIAHPCFYGIDTSTHEELIASSHSVDEIRQEIGADTLSFLSVEGLL 188

Query: 121 KMLG----DDSQNFCYACFSGKYPVK-PEEMKVKRVGE 153
           K +G    D +   C ACF+GKYP +  ++  +  V E
Sbjct: 189 KGIGRKYDDSNCGQCLACFTGKYPTEIYQDTVLPHVKE 226


>d1ecfa1 c.61.1.1 (A:250-492) Glutamine PRPP amidotransferase, C-terminal domain {Escherichia coli [TaxId: 562]} Length = 243 Back     information, alignment and structure
>d1wd5a_ c.61.1.1 (A:) Putative phosphoribosyltransferase TT1426 (TTHA1462) {Thermus thermophilus [TaxId: 274]} Length = 208 Back     information, alignment and structure
>d1vcha1 c.61.1.1 (A:2-175) Putative phosphoribosyltransferase TTHA1613 {Thermus thermophilus [TaxId: 274]} Length = 174 Back     information, alignment and structure
>d2c4ka2 c.61.1.2 (A:167-350) PRPP synthetase-associated protein 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 184 Back     information, alignment and structure
>d1y0ba1 c.61.1.1 (A:1-191) Xanthine phosphoribosyltransferase {Bacillus subtilis [TaxId: 1423]} Length = 191 Back     information, alignment and structure
>d1dkua2 c.61.1.2 (A:167-315) Phosphoribosylpyrophosphate synthetase {Bacillus subtilis [TaxId: 1423]} Length = 149 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query158
d1gph11231 Glutamine PRPP amidotransferase, C-terminal domain 100.0
d1ecfa1243 Glutamine PRPP amidotransferase, C-terminal domain 100.0
d1u9ya2129 Phosphoribosylpyrophosphate synthetase {Methanocal 99.83
d1dkua2149 Phosphoribosylpyrophosphate synthetase {Bacillus s 99.81
d2c4ka2184 PRPP synthetase-associated protein 1 {Human (Homo 99.71
d1wd5a_208 Putative phosphoribosyltransferase TT1426 (TTHA146 99.16
d1vdma1153 Pprobable purine phosphoribosyltransferase PH0095 99.03
d1yfza1178 Xanthine-guanine PRTase (XPRTase) {Thermoanaerobac 98.95
d1tc1a_184 Hypoxanthine PRTase {Trypanosoma cruzi [TaxId: 569 98.94
d1pzma_183 Hypoxanthine-guanine-xanthine PRTase {Leishmania t 98.93
d1j7ja_172 Hypoxanthine PRTase {Salmonella typhimurium [TaxId 98.88
d1ufra_178 Pyrimidine operon regulator PyrR {Thermus thermoph 98.86
d1cjba_228 Hypoxanthine-guanine PRTase (HGPRTase) {Plasmodium 98.83
d1z7ga1214 Hypoxanthine-guanine PRTase (HGPRTase) {Human (Hom 98.82
d1w30a_182 Pyrimidine operon regulator PyrR {Mycobacterium tu 98.81
d1fsga_233 Hypoxanthine-guanine-xanthine PRTase {Toxoplasma g 98.79
d1a3ca_178 Pyrimidine operon regulator PyrR {Bacillus subtili 98.79
d1hgxa_173 Hypoxanthine-guanine-xanthine PRTase {Tritrichomon 98.75
d2aeea1208 Orotate PRTase {Streptococcus pyogenes [TaxId: 131 98.74
d1vcha1174 Putative phosphoribosyltransferase TTHA1613 {Therm 98.72
d1qb7a_236 Adenine PRTase {Leishmania donovani [TaxId: 5661]} 98.59
d1g2qa_178 Adenine PRTase {Baker's yeast (Saccharomyces cerev 98.56
d1zn7a1178 Adenine PRTase {Human (Homo sapiens) [TaxId: 9606] 98.53
d1l1qa_181 Adenine PRTase {Giardia lamblia [TaxId: 5741]} 98.52
d1lh0a_213 Orotate PRTase {Salmonella typhimurium [TaxId: 903 98.5
d1y0ba1191 Xanthine phosphoribosyltransferase {Bacillus subti 98.47
d1o57a2202 Pur operon repressor (PurR), C-terminal domain {Ba 98.43
d1dqna_230 Guanine PRTase {Giardia lamblia [TaxId: 5741]} 98.41
d1nula_150 Xanthine-guanine PRTase (XPRTase) {Escherichia col 97.91
d1i5ea_208 Uracil PRTase, Upp {Bacillus caldolyticus [TaxId: 97.54
d1o5oa_210 Uracil PRTase, Upp {Thermotoga maritima [TaxId: 23 97.41
d1v9sa1208 Uracil PRTase, Upp {Thermus thermophilus [TaxId: 2 97.31
d1bd3a_224 Uracil PRTase, Upp {Toxoplasma gondii [TaxId: 5811 96.99
d1xtta1215 Uracil PRTase, Upp {Sulfolobus solfataricus [TaxId 96.63
>d1gph11 c.61.1.1 (1:235-465) Glutamine PRPP amidotransferase, C-terminal domain {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Glutamine PRPP amidotransferase, C-terminal domain
species: Bacillus subtilis [TaxId: 1423]
Probab=100.00  E-value=1.3e-37  Score=250.19  Aligned_cols=155  Identities=54%  Similarity=0.892  Sum_probs=144.0

Q ss_pred             CCCCccccceeeCCChhhhcccCceeeccccccCCCCEEEEEeccccccHHHHHHHHHHHHcCCcEEEEEeecCCceecc
Q 045545            1 MNTTRYEHETFIEPSQKIRDFGVKLKLSPVTGVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMRIASPPIIASC   80 (158)
Q Consensus         1 ~~~n~~~~r~~~~~~~k~R~~~~~~~~~~~~~~v~gk~vliVDDvi~TG~Tl~~~~~~L~~~Ga~~V~v~v~~~~~~~~~   80 (158)
                      ++||+|.+|+|++|+|+.|...++.+++++.+.++||+|+||||.|.+|+|+...+++|+++||++||+++++||+.+||
T Consensus        69 ~ikn~~~~RtFI~p~~~~R~~~v~~K~~~~~~~i~gK~vvlVDDSIVRGtT~k~iv~~lr~aGakeVh~~i~sPpi~~pc  148 (231)
T d1gph11          69 LIKNRYVGRTFIQPSQALREQGVRMKLSAVRGVVEGKRVVMVDDSIVRGTTSRRIVTMLREAGATEVHVKISSPPIAHPC  148 (231)
T ss_dssp             EEECTTCSTTCCCCCHHHHHHTCCCSEEECHHHHTTCEEEEEESCCSSSHHHHHHHHHHHHTTCSEEEEEESSCCCCSCC
T ss_pred             ceehhhhhhccCCCchHHHHHHHHHhhhhhhheeccCceEEeehhhhccchHHHHHHHHHHcCCCeEEEEecccceeeee
Confidence            47999999999999999999999999988888999999999999999999999999999999999999999999999999


Q ss_pred             eeeecCCCHHHHHhcCccchhhheeeccCcccccChHHHHHHhcCC----CCCcccccccCcCCcCcc-hhhhhhccccc
Q 045545           81 YYGVDTPSSEELISNRMSVEEIREFIGCDSLAFLLIDSLNKMLGDD----SQNFCYACFSGKYPVKPE-EMKVKRVGEFV  155 (158)
Q Consensus        81 ~~gi~~~~~~eli~~~~~~~~i~~~i~tdsi~~~sl~~l~~~~~~~----~~~~~~~cf~~~y~~~~~-~~~~~~~~~~~  155 (158)
                      +||++++...|+++++.+.++|++.+++|||.|+|+++|.++++..    ...+|++||+|+||+++. +.+++.|.|-.
T Consensus       149 ~yGID~p~~~ELIA~~~t~eEI~~~igaDSL~Ylsle~L~~ai~~~~~~~~~~~C~aCFtG~YPt~~~~e~~~~~lee~~  228 (231)
T d1gph11         149 FYGIDTSTHEELIASSHSVDEIRQEIGADTLSFLSVEGLLKGIGRKYDDSNCGQCLACFTGKYPTEIYQDTVLPHVKEAV  228 (231)
T ss_dssp             CSCGGGCCSSCCHHHHCCHHHHHHHHTCSEEEECCHHHHHHHHCCCCSSTTTTEECHHHHSCCSSCCCTTCCCGGGGCCB
T ss_pred             eeccccccchhhhhcccCHHHHHhhhcCCeeEeccHHHHHHHHhcccCCCCCCcCCeeeCCeecCCCCCHhHHHHHHHHh
Confidence            9999999999999999999999999999999999999999999653    235899999999999985 55777776643



>d1ecfa1 c.61.1.1 (A:250-492) Glutamine PRPP amidotransferase, C-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1u9ya2 c.61.1.2 (A:156-284) Phosphoribosylpyrophosphate synthetase {Methanocaldococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
>d1dkua2 c.61.1.2 (A:167-315) Phosphoribosylpyrophosphate synthetase {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d2c4ka2 c.61.1.2 (A:167-350) PRPP synthetase-associated protein 1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1wd5a_ c.61.1.1 (A:) Putative phosphoribosyltransferase TT1426 (TTHA1462) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1vdma1 c.61.1.1 (A:1-153) Pprobable purine phosphoribosyltransferase PH0095 {Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1yfza1 c.61.1.1 (A:3-180) Xanthine-guanine PRTase (XPRTase) {Thermoanaerobacter tengcongensis [TaxId: 119072]} Back     information, alignment and structure
>d1tc1a_ c.61.1.1 (A:) Hypoxanthine PRTase {Trypanosoma cruzi [TaxId: 5693]} Back     information, alignment and structure
>d1pzma_ c.61.1.1 (A:) Hypoxanthine-guanine-xanthine PRTase {Leishmania tarentolae [TaxId: 5689]} Back     information, alignment and structure
>d1j7ja_ c.61.1.1 (A:) Hypoxanthine PRTase {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1ufra_ c.61.1.1 (A:) Pyrimidine operon regulator PyrR {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1cjba_ c.61.1.1 (A:) Hypoxanthine-guanine PRTase (HGPRTase) {Plasmodium falciparum [TaxId: 5833]} Back     information, alignment and structure
>d1z7ga1 c.61.1.1 (A:4-217) Hypoxanthine-guanine PRTase (HGPRTase) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1w30a_ c.61.1.1 (A:) Pyrimidine operon regulator PyrR {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1fsga_ c.61.1.1 (A:) Hypoxanthine-guanine-xanthine PRTase {Toxoplasma gondii [TaxId: 5811]} Back     information, alignment and structure
>d1a3ca_ c.61.1.1 (A:) Pyrimidine operon regulator PyrR {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1hgxa_ c.61.1.1 (A:) Hypoxanthine-guanine-xanthine PRTase {Tritrichomonas foetus [TaxId: 5724]} Back     information, alignment and structure
>d2aeea1 c.61.1.1 (A:1-208) Orotate PRTase {Streptococcus pyogenes [TaxId: 1314]} Back     information, alignment and structure
>d1vcha1 c.61.1.1 (A:2-175) Putative phosphoribosyltransferase TTHA1613 {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1qb7a_ c.61.1.1 (A:) Adenine PRTase {Leishmania donovani [TaxId: 5661]} Back     information, alignment and structure
>d1g2qa_ c.61.1.1 (A:) Adenine PRTase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1zn7a1 c.61.1.1 (A:3-180) Adenine PRTase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1l1qa_ c.61.1.1 (A:) Adenine PRTase {Giardia lamblia [TaxId: 5741]} Back     information, alignment and structure
>d1lh0a_ c.61.1.1 (A:) Orotate PRTase {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1y0ba1 c.61.1.1 (A:1-191) Xanthine phosphoribosyltransferase {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1o57a2 c.61.1.1 (A:75-276) Pur operon repressor (PurR), C-terminal domain {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1dqna_ c.61.1.1 (A:) Guanine PRTase {Giardia lamblia [TaxId: 5741]} Back     information, alignment and structure
>d1nula_ c.61.1.1 (A:) Xanthine-guanine PRTase (XPRTase) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1i5ea_ c.61.1.1 (A:) Uracil PRTase, Upp {Bacillus caldolyticus [TaxId: 1394]} Back     information, alignment and structure
>d1o5oa_ c.61.1.1 (A:) Uracil PRTase, Upp {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1v9sa1 c.61.1.1 (A:1-208) Uracil PRTase, Upp {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1bd3a_ c.61.1.1 (A:) Uracil PRTase, Upp {Toxoplasma gondii [TaxId: 5811]} Back     information, alignment and structure
>d1xtta1 c.61.1.1 (A:2-216) Uracil PRTase, Upp {Sulfolobus solfataricus [TaxId: 2287]} Back     information, alignment and structure