Psyllid ID: psy10102


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80------
KVQVLWTFSIYLESVAILPQLFLVSKTGEAESITSHYLFALGAYRALYLLNWVYRYYSEDYLDLIAIVAGVVQTALYCDFFYLYIT
cEEEEEHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHEEEEEEc
cHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHEEEEEc
KVQVLWTFSIYLESVAILPQLFlvsktgeaesiTSHYLFALGAYRALYLLNWVYRYYSEDYLDLIAIVAGVVQTALYCDFFYLYIT
KVQVLWTFSIYLESVAILPQLFLVSKTGEAESITSHYLFALGAYRALYLLNWVYRYYSEDYLDLIAIVAGVVQTALYCDFFYLYIT
KVQVLWTFSIYLESVAILPQLFLVSKTGEAESITSHYLFALGAYRALYLLNWVYRYYSEDYLDLIAIVAGVVQTALYCDFFYLYIT
**QVLWTFSIYLESVAILPQLFLVSKTGEAESITSHYLFALGAYRALYLLNWVYRYYSEDYLDLIAIVAGVVQTALYCDFFYLYI*
KVQVLWTFSIYLESVAILPQLFLVSKTGEAESITSHYLFALGAYRALYLLNWVYRYYSEDYLDLIAIVAGVVQTALYCDFFYLYIT
KVQVLWTFSIYLESVAILPQLFLVSKTGEAESITSHYLFALGAYRALYLLNWVYRYYSEDYLDLIAIVAGVVQTALYCDFFYLYIT
KVQVLWTFSIYLESVAILPQLFLVSKTGEAESITSHYLFALGAYRALYLLNWVYRYYSEDYLDLIAIVAGVVQTALYCDFFYLYIT
ooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHi
oooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHHHHHi
oooooHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHiiiii
ooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooo
oooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHi
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
KVQVLWTFSIYLESVAILPQLFLVSKTGEAESITSHYLFALGAYRALYLLNWVYRYYSEDYLDLIAIVAGVVQTALYCDFFYLYIT
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query86 2.2.26 [Sep-21-2011]
O76767212 ER lumen protein retainin yes N/A 0.988 0.400 0.870 1e-36
Q5XHA2212 ER lumen protein retainin yes N/A 0.988 0.400 0.811 4e-35
P33946212 ER lumen protein retainin yes N/A 1.0 0.405 0.790 6e-35
Q569A6212 ER lumen protein retainin yes N/A 1.0 0.405 0.790 6e-35
Q99JH8212 ER lumen protein retainin yes N/A 1.0 0.405 0.790 6e-35
P24390212 ER lumen protein retainin yes N/A 1.0 0.405 0.790 7e-35
Q68ES4212 ER lumen protein retainin N/A N/A 0.988 0.400 0.8 7e-35
Q5ZKX9212 ER lumen protein retainin yes N/A 0.988 0.400 0.776 1e-34
Q6PEH1212 ER lumen protein retainin yes N/A 1.0 0.405 0.755 2e-34
Q5U305212 ER lumen protein retainin no N/A 0.988 0.400 0.776 2e-34
>sp|O76767|ERD2_DROME ER lumen protein retaining receptor OS=Drosophila melanogaster GN=KdelR PE=2 SV=1 Back     alignment and function desciption
 Score =  151 bits (382), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 74/85 (87%), Positives = 79/85 (92%)

Query: 2   VQVLWTFSIYLESVAILPQLFLVSKTGEAESITSHYLFALGAYRALYLLNWVYRYYSEDY 61
           ++VLWTFSIYLESVAILPQLFLVS+TGEAESITSHYLFALG+YRALYLLNWVYRY  E +
Sbjct: 116 MEVLWTFSIYLESVAILPQLFLVSRTGEAESITSHYLFALGSYRALYLLNWVYRYMVESH 175

Query: 62  LDLIAIVAGVVQTALYCDFFYLYIT 86
            DLIAI AGVVQT LYCDFFYLYIT
Sbjct: 176 YDLIAIFAGVVQTVLYCDFFYLYIT 200




Required for the retention of luminal endoplasmic reticulum proteins. Determines the specificity of the luminal ER protein retention system. Also required for normal vesicular traffic through the Golgi.
Drosophila melanogaster (taxid: 7227)
>sp|Q5XHA2|ERD21_XENTR ER lumen protein retaining receptor 1 OS=Xenopus tropicalis GN=kdelr1 PE=2 SV=1 Back     alignment and function description
>sp|P33946|ERD21_BOVIN ER lumen protein retaining receptor 1 OS=Bos taurus GN=KDELR1 PE=2 SV=2 Back     alignment and function description
>sp|Q569A6|ERD21_RAT ER lumen protein retaining receptor 1 OS=Rattus norvegicus GN=Kdelr1 PE=2 SV=1 Back     alignment and function description
>sp|Q99JH8|ERD21_MOUSE ER lumen protein retaining receptor 1 OS=Mus musculus GN=Kdelr1 PE=2 SV=1 Back     alignment and function description
>sp|P24390|ERD21_HUMAN ER lumen protein retaining receptor 1 OS=Homo sapiens GN=KDELR1 PE=1 SV=1 Back     alignment and function description
>sp|Q68ES4|ER21B_XENLA ER lumen protein retaining receptor 1-B OS=Xenopus laevis GN=kdelr1-b PE=2 SV=1 Back     alignment and function description
>sp|Q5ZKX9|ERD22_CHICK ER lumen protein retaining receptor 2 OS=Gallus gallus GN=KDELR2 PE=2 SV=1 Back     alignment and function description
>sp|Q6PEH1|ERD22_DANRE ER lumen protein retaining receptor 2 OS=Danio rerio GN=kdelr2 PE=2 SV=1 Back     alignment and function description
>sp|Q5U305|ERD22_RAT ER lumen protein retaining receptor 2 OS=Rattus norvegicus GN=Kdelr2 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query86
350404577 212 PREDICTED: ER lumen protein retaining re 0.988 0.400 0.905 3e-37
340720410 210 PREDICTED: ER lumen protein retaining re 0.988 0.404 0.894 4e-37
322801397 212 hypothetical protein SINV_03211 [Solenop 0.988 0.400 0.894 6e-37
307181434 212 ER lumen protein retaining receptor [Cam 0.988 0.400 0.894 8e-37
307198841 212 ER lumen protein retaining receptor [Har 0.988 0.400 0.894 8e-37
332023553 212 ER lumen protein retaining receptor [Acr 0.988 0.400 0.882 8e-37
380017971 212 PREDICTED: ER lumen protein retaining re 0.988 0.400 0.870 5e-36
242014178 212 ER lumen protein retaining receptor, put 0.988 0.400 0.835 5e-36
47214332 1006 unnamed protein product [Tetraodon nigro 0.988 0.084 0.776 6e-36
29840982 212 similar to NM_057948 ER lumen protein re 0.988 0.400 0.835 8e-36
>gi|350404577|ref|XP_003487151.1| PREDICTED: ER lumen protein retaining receptor-like [Bombus impatiens] Back     alignment and taxonomy information
 Score =  159 bits (401), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 77/85 (90%), Positives = 82/85 (96%)

Query: 2   VQVLWTFSIYLESVAILPQLFLVSKTGEAESITSHYLFALGAYRALYLLNWVYRYYSEDY 61
           V+VLWTFSIYLESVAILPQLFLVSKTGEAESITSHYLFALG+YR LYLLNWVYRYY+ED+
Sbjct: 116 VEVLWTFSIYLESVAILPQLFLVSKTGEAESITSHYLFALGSYRGLYLLNWVYRYYAEDH 175

Query: 62  LDLIAIVAGVVQTALYCDFFYLYIT 86
            DLIAIVAG+VQT LYCDFFYLYIT
Sbjct: 176 YDLIAIVAGLVQTILYCDFFYLYIT 200




Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340720410|ref|XP_003398632.1| PREDICTED: ER lumen protein retaining receptor-like [Bombus terrestris] Back     alignment and taxonomy information
>gi|322801397|gb|EFZ22058.1| hypothetical protein SINV_03211 [Solenopsis invicta] Back     alignment and taxonomy information
>gi|307181434|gb|EFN69029.1| ER lumen protein retaining receptor [Camponotus floridanus] Back     alignment and taxonomy information
>gi|307198841|gb|EFN79617.1| ER lumen protein retaining receptor [Harpegnathos saltator] Back     alignment and taxonomy information
>gi|332023553|gb|EGI63789.1| ER lumen protein retaining receptor [Acromyrmex echinatior] Back     alignment and taxonomy information
>gi|380017971|ref|XP_003692915.1| PREDICTED: ER lumen protein retaining receptor-like [Apis florea] Back     alignment and taxonomy information
>gi|242014178|ref|XP_002427772.1| ER lumen protein retaining receptor, putative [Pediculus humanus corporis] gi|212512226|gb|EEB15034.1| ER lumen protein retaining receptor, putative [Pediculus humanus corporis] Back     alignment and taxonomy information
>gi|47214332|emb|CAG00841.1| unnamed protein product [Tetraodon nigroviridis] Back     alignment and taxonomy information
>gi|29840982|gb|AAP05983.1| similar to NM_057948 ER lumen protein retaining receptor 2 in Drosophila melanogaster [Schistosoma japonicum] gi|226484602|emb|CAX74210.1| ER lumen protein retaining receptor 2 (KDEL receptor 2) [Schistosoma japonicum] gi|226484604|emb|CAX74211.1| ER lumen protein retaining receptor 2 (KDEL receptor 2) [Schistosoma japonicum] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query86
FB|FBgn0022268212 KdelR "KDEL receptor" [Drosoph 0.988 0.400 0.870 7.2e-36
UNIPROTKB|F1N840212 KDELR2 "ER lumen protein retai 0.988 0.400 0.776 1.3e-34
UNIPROTKB|Q5ZKX9212 KDELR2 "ER lumen protein retai 0.988 0.400 0.776 1.3e-34
UNIPROTKB|P33946212 KDELR1 "ER lumen protein retai 0.988 0.400 0.8 1.3e-34
UNIPROTKB|P24390212 KDELR1 "ER lumen protein retai 0.988 0.400 0.8 1.3e-34
UNIPROTKB|Q8NBW7150 KDELR1 "ER lumen protein retai 0.988 0.566 0.8 1.3e-34
UNIPROTKB|F2Z4Z3212 KDELR1 "ER lumen protein retai 0.988 0.400 0.8 1.3e-34
MGI|MGI:1915387212 Kdelr1 "KDEL (Lys-Asp-Glu-Leu) 0.988 0.400 0.8 1.3e-34
RGD|1306764212 Kdelr1 "KDEL (Lys-Asp-Glu-Leu) 0.988 0.400 0.8 1.3e-34
UNIPROTKB|G3X6R6212 KDELR2 "ER lumen protein retai 0.988 0.400 0.776 3.6e-34
FB|FBgn0022268 KdelR "KDEL receptor" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 387 (141.3 bits), Expect = 7.2e-36, P = 7.2e-36
 Identities = 74/85 (87%), Positives = 79/85 (92%)

Query:     2 VQVLWTFSIYLESVAILPQLFLVSKTGEAESITSHYLFALGAYRALYLLNWVYRYYSEDY 61
             ++VLWTFSIYLESVAILPQLFLVS+TGEAESITSHYLFALG+YRALYLLNWVYRY  E +
Sbjct:   116 MEVLWTFSIYLESVAILPQLFLVSRTGEAESITSHYLFALGSYRALYLLNWVYRYMVESH 175

Query:    62 LDLIAIVAGVVQTALYCDFFYLYIT 86
              DLIAI AGVVQT LYCDFFYLYIT
Sbjct:   176 YDLIAIFAGVVQTVLYCDFFYLYIT 200




GO:0030140 "trans-Golgi network transport vesicle" evidence=ISS;NAS
GO:0005046 "KDEL sequence binding" evidence=ISS;NAS
GO:0006890 "retrograde vesicle-mediated transport, Golgi to ER" evidence=ISS;NAS
GO:0005783 "endoplasmic reticulum" evidence=NAS
GO:0006891 "intra-Golgi vesicle-mediated transport" evidence=NAS
GO:0006621 "protein retention in ER lumen" evidence=IEA;NAS
GO:0016021 "integral to membrane" evidence=IEA;NAS
UNIPROTKB|F1N840 KDELR2 "ER lumen protein retaining receptor" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|Q5ZKX9 KDELR2 "ER lumen protein retaining receptor 2" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|P33946 KDELR1 "ER lumen protein retaining receptor 1" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|P24390 KDELR1 "ER lumen protein retaining receptor 1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|Q8NBW7 KDELR1 "ER lumen protein retaining receptor" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F2Z4Z3 KDELR1 "ER lumen protein retaining receptor" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
MGI|MGI:1915387 Kdelr1 "KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 1" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|1306764 Kdelr1 "KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 1" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|G3X6R6 KDELR2 "ER lumen protein retaining receptor" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P18414ERD2_YEASTNo assigned EC number0.58130.98830.3881yesN/A
P18413ERD2_KLULANo assigned EC number0.59030.96510.3789yesN/A
Q5ZKX9ERD22_CHICKNo assigned EC number0.77640.98830.4009yesN/A
Q99JH8ERD21_MOUSENo assigned EC number0.79061.00.4056yesN/A
O94270ERD2_SCHPONo assigned EC number0.54870.95340.3867yesN/A
O76767ERD2_DROMENo assigned EC number0.87050.98830.4009yesN/A
P24390ERD21_HUMANNo assigned EC number0.79061.00.4056yesN/A
P35402ERD2_ARATHNo assigned EC number0.57830.95340.3813yesN/A
Q569A6ERD21_RATNo assigned EC number0.79061.00.4056yesN/A
Q86JE5ERD2_DICDINo assigned EC number0.55420.96510.3807yesN/A
P48583ERD2_CAEELNo assigned EC number0.71760.98830.3990yesN/A
P33946ERD21_BOVINNo assigned EC number0.79061.00.4056yesN/A
P33948ERD2_PLAFANo assigned EC number0.56090.93020.3619yesN/A
Q6PEH1ERD22_DANRENo assigned EC number0.75581.00.4056yesN/A
Q5XHA2ERD21_XENTRNo assigned EC number0.81170.98830.4009yesN/A
Q76NM1ERD2_PLAF7No assigned EC number0.56090.93020.3619yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query86
COG5196214 COG5196, ERD2, ER lumen protein retaining receptor 1e-26
pfam00810143 pfam00810, ER_lumen_recept, ER lumen protein retai 1e-23
>gnl|CDD|227523 COG5196, ERD2, ER lumen protein retaining receptor [Intracellular trafficking and secretion] Back     alignment and domain information
 Score = 96.4 bits (240), Expect = 1e-26
 Identities = 48/85 (56%), Positives = 61/85 (71%), Gaps = 1/85 (1%)

Query: 3   QVLWTFSIYLESVAILPQLFLVSKTGEAESITSHYLFALGAYRALYLLNWVYRYYSED-Y 61
            VLWTFS++LESVAILPQL ++ + GE ES+TSHY+FA+G YRALY+  W+ R   +   
Sbjct: 118 NVLWTFSLWLESVAILPQLVMLQEAGETESLTSHYVFAMGLYRALYIPYWILRKVYDIKK 177

Query: 62  LDLIAIVAGVVQTALYCDFFYLYIT 86
              IAI AG+VQT LY DFF +Y  
Sbjct: 178 TGNIAIAAGIVQTLLYLDFFAIYYR 202


Length = 214

>gnl|CDD|144416 pfam00810, ER_lumen_recept, ER lumen protein retaining receptor Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 86
KOG3106|consensus212 100.0
COG5196214 ERD2 ER lumen protein retaining receptor [Intracel 100.0
PF00810147 ER_lumen_recept: ER lumen protein retaining recept 99.96
PF0419361 PQ-loop: PQ loop repeat 95.84
smart0067932 CTNS Repeated motif present between transmembrane 84.47
>KOG3106|consensus Back     alignment and domain information
Probab=100.00  E-value=9.7e-44  Score=260.63  Aligned_cols=85  Identities=75%  Similarity=1.337  Sum_probs=82.8

Q ss_pred             ceeehhhHHHHHHhHhhhHhHhhhhcCCcchhHHHHHHHHHHHHHHHHHhhhhhhhhcCCcchhHhHHHHHHHHHHhcee
Q psy10102          2 VQVLWTFSIYLESVAILPQLFLVSKTGEAESITSHYLFALGAYRALYLLNWVYRYYSEDYLDLIAIVAGVVQTALYCDFF   81 (86)
Q Consensus         2 ~ei~WtfSi~LEsvAILPQL~ml~k~~~ve~lts~Yv~~Lg~yR~ly~~~Wi~~y~~~~~~~~~~~~~g~iqt~l~~dF~   81 (86)
                      .|++||||+|||||||||||+|+||+|++|++|+||+|+||+||++|++|||+|+..+++++++++++|++||++|||||
T Consensus       116 ~eilWtFsiyLEsVaILPQL~~lq~tg~~E~~TahYvfaLG~yR~ly~~~WI~r~~~e~~~~~iai~agiVQT~ly~DFf  195 (212)
T KOG3106|consen  116 LEILWTFSIYLESVAILPQLFMLQKTGEAETITAHYLFALGLYRALYIANWIYRYVTEDFWDPIAIVAGIVQTVLYADFF  195 (212)
T ss_pred             HHHHHHHHHHHHHHHHhHHHHHHHhcCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHhHH
Confidence            38999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eEeeC
Q psy10102         82 YLYIT   86 (86)
Q Consensus        82 y~Y~~   86 (86)
                      |+|+|
T Consensus       196 y~Y~~  200 (212)
T KOG3106|consen  196 YLYVT  200 (212)
T ss_pred             HHHHH
Confidence            99974



>COG5196 ERD2 ER lumen protein retaining receptor [Intracellular trafficking and secretion] Back     alignment and domain information
>PF00810 ER_lumen_recept: ER lumen protein retaining receptor; InterPro: IPR000133 Proteins resident in the lumen of the endoplasmic reticulum (ER) contain a C-terminal tetrapeptide, commonly known as Lys-Asp-Glu-Leu (KDEL) in mammals and His-Asp-Glu-Leu (HDEL) in yeast (Saccharomyces cerevisiae) that acts as a signal for their retrieval from subsequent compartments of the secretory pathway Back     alignment and domain information
>PF04193 PQ-loop: PQ loop repeat Back     alignment and domain information
>smart00679 CTNS Repeated motif present between transmembrane helices in cystinosin, yeast ERS1p, mannose-P-dolichol utilization defect 1, and other hypothetical proteins Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00