Psyllid ID: psy10161


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------
IFFILRKKYNQVSVLHLYHHVSTLFICWWGSRYYPGGLALFPILLNSSVHIIMYTYYLIANFGPKWQALVAPIKPYITIIQMVSSFTFTLCRNHEISRRLSHDPTICSQAQFTLLILMSFVLVSPYYCKDGPQTLAYIFLPNLVLVYYLFYQFFKRTYLGTDHPNKYPNKTNKKLQQLQEQYQRQKQNGGQWSQKSK
cEEEEEcccccccEEEHHHHcHHHHHHHHccEEcccccccccccccHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHccccccccccc
cEEEEEEccccEEEEEEEEccHHHHHEEEEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEccccHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHcccccccccccccccccccccccccccc
IFFILRKKYNQVSVLHLYHHVSTLFIcwwgsryypgglaLFPILLNSSVHIIMYTYYLIANFGPkwqalvapikpyITIIQMVSSFTFTLCRNHEisrrlshdpticsQAQFTLLILMSFVLvspyyckdgpqtlayifLPNLVLVYYLFYQFFKrtylgtdhpnkypnktNKKLQQLQEQYQRQkqnggqwsqksk
IFFILRKKYNQVSVLHLYHHVSTLFICWWGSRYYPGGLALFPILLNSSVHIIMYTYYLIANFGPKWQALVAPIKPYITIIQMVSSFTFTLCRNHEISRRLSHDPTICSQAQFTLLILMSFVLVSPYYCKDGPQTLAYIFLPNLVLVYYLFYQFFKRTYLGTDHPNKYPNKTNKKLQQLQEQYQrqkqnggqwsqksk
IFFILRKKYNQVSVLHLYHHVSTLFICWWGSRYYPGGLALFPILLNSSVHIIMYTYYLIANFGPKWQALVAPIKPYITIIQMVSSFTFTLCRNHEISRRLSHDPTICSQAQFTLLILMSFVLVSPYYCKDGPQTLAYIFLPNLVLVYYLFYQFFKRTYLGTDHPNKYPNKTNkklqqlqeqyqrqkqNGGQWSQKSK
*FFILRKKYNQVSVLHLYHHVSTLFICWWGSRYYPGGLALFPILLNSSVHIIMYTYYLIANFGPKWQALVAPIKPYITIIQMVSSFTFTLCRNHEISRRLSHDPTICSQAQFTLLILMSFVLVSPYYCKDGPQTLAYIFLPNLVLVYYLFYQFFKRTYLGT************************************
IFFILRKKYNQVSVLHLYHHVSTLFICWWGSRYYPGGLALFPILLNSSVHIIMYTYYLIANFGPKWQALVAPIKPYITIIQMVSSFTFTLCRNHEISRRLSHDPTICSQAQFTLLILMSFVLVSPYYCKDGPQTLAYIFLPNLVLVYYLFYQFFK******************************************
IFFILRKKYNQVSVLHLYHHVSTLFICWWGSRYYPGGLALFPILLNSSVHIIMYTYYLIANFGPKWQALVAPIKPYITIIQMVSSFTFTLCRNHEISRRLSHDPTICSQAQFTLLILMSFVLVSPYYCKDGPQTLAYIFLPNLVLVYYLFYQFFKRTYLGTDHPNKYPNKTNKKLQQ********************
IFFILRKKYNQVSVLHLYHHVSTLFICWWGSRYYPGGLALFPILLNSSVHIIMYTYYLIANFGPKWQALVAPIKPYITIIQMVSSFTFTLCRNHEISRRLSHDPTICSQAQFTLLILMSFVLVSPYYCKDGPQTLAYIFLPNLVLVYYLFYQFFKRTYLGT************************************
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
IFFILRKKYNQVSVLHLYHHVSTLFICWWGSRYYPGGLALFPILLNSSVHIIMYTYYLIANFGPKWQALVAPIKPYITIIQMVSSFTFTLCRNHEISRRLSHDPTICSQAQFTLLILMSFVLVSPYYCKDGPQTLAYIFLPNLVLVYYLFYQFFKRTYLGTDHPNKYPNKTNKKxxxxxxxxxxxxxxxxxxxxxSK
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query197 2.2.26 [Sep-21-2011]
Q3S8M4314 Elongation of very long c yes N/A 0.411 0.257 0.511 9e-15
Q95K73314 Elongation of very long c N/A N/A 0.411 0.257 0.511 9e-15
Q9GZR5314 Elongation of very long c yes N/A 0.802 0.503 0.303 3e-14
Q9EQC4312 Elongation of very long c yes N/A 0.411 0.259 0.5 3e-14
A1L3X0281 Elongation of very long c no N/A 0.416 0.291 0.433 3e-13
Q9BW60279 Elongation of very long c no N/A 0.416 0.293 0.445 1e-12
A0JNC4281 Elongation of very long c no N/A 0.416 0.291 0.421 1e-12
Q9D2Y9281 Elongation of very long c no N/A 0.416 0.291 0.409 6e-12
D4ADY9281 Elongation of very long c no N/A 0.416 0.291 0.421 6e-12
Q1HRV8358 Elongation of very long c N/A N/A 0.649 0.357 0.310 6e-12
>sp|Q3S8M4|ELOV4_MACMU Elongation of very long chain fatty acids protein 4 OS=Macaca mulatta GN=ELOVL4 PE=3 SV=1 Back     alignment and function desciption
 Score = 80.1 bits (196), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 43/84 (51%), Positives = 57/84 (67%), Gaps = 3/84 (3%)

Query: 1   IFFILRKKYNQVSVLHLYHHVSTLFICWW-GSRYYPGGLALFPILLNSSVHIIMYTYYLI 59
           +FFILRKK NQVS LH+YHH  T+F  WW G ++  GG A F   +NS +H+IMY+YY +
Sbjct: 143 VFFILRKKNNQVSFLHVYHHC-TMFTLWWIGIKWVAGGQAFFGAQMNSFIHVIMYSYYGL 201

Query: 60  ANFGPKWQALVAPIKPYITIIQMV 83
           A FGP W       K Y+T++Q+V
Sbjct: 202 AAFGP-WIQKYLWWKRYLTMLQLV 224




Condensing enzyme that elongates saturated and monounsaturated very long chain fatty acids (VLCFAs) (By similarity). Seems to represent a photoreceptor-specific component of the fatty acid elongation system residing on the endoplasmic reticulum (By similarity). May play a critical role in early brain and skin development.
Macaca mulatta (taxid: 9544)
EC: 2EC: .EC: 3EC: .EC: 1EC: .EC: nEC: 8
>sp|Q95K73|ELOV4_MACFA Elongation of very long chain fatty acids protein 4 OS=Macaca fascicularis GN=ELOVL4 PE=2 SV=1 Back     alignment and function description
>sp|Q9GZR5|ELOV4_HUMAN Elongation of very long chain fatty acids protein 4 OS=Homo sapiens GN=ELOVL4 PE=1 SV=1 Back     alignment and function description
>sp|Q9EQC4|ELOV4_MOUSE Elongation of very long chain fatty acids protein 4 OS=Mus musculus GN=Elovl4 PE=1 SV=2 Back     alignment and function description
>sp|A1L3X0|ELOV7_HUMAN Elongation of very long chain fatty acids protein 7 OS=Homo sapiens GN=ELOVL7 PE=1 SV=1 Back     alignment and function description
>sp|Q9BW60|ELOV1_HUMAN Elongation of very long chain fatty acids protein 1 OS=Homo sapiens GN=ELOVL1 PE=1 SV=1 Back     alignment and function description
>sp|A0JNC4|ELOV7_BOVIN Elongation of very long chain fatty acids protein 7 OS=Bos taurus GN=ELOVL7 PE=2 SV=1 Back     alignment and function description
>sp|Q9D2Y9|ELOV7_MOUSE Elongation of very long chain fatty acids protein 7 OS=Mus musculus GN=Elovl7 PE=2 SV=1 Back     alignment and function description
>sp|D4ADY9|ELOV7_RAT Elongation of very long chain fatty acids protein 7 OS=Rattus norvegicus GN=Elovl7 PE=3 SV=1 Back     alignment and function description
>sp|Q1HRV8|ELVL1_AEDAE Elongation of very long chain fatty acids protein AAEL008004 OS=Aedes aegypti GN=AAEL008004 PE=2 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query197
270009529262 hypothetical protein TcasGA2_TC008803 [T 0.654 0.492 0.411 5e-26
328710025281 PREDICTED: elongation of very long chain 0.659 0.462 0.383 1e-24
345494828264 PREDICTED: elongation of very long chain 0.695 0.518 0.421 3e-24
345489465287 PREDICTED: elongation of very long chain 0.670 0.459 0.368 9e-24
383849164284 PREDICTED: elongation of very long chain 0.664 0.461 0.364 2e-22
193592017273 PREDICTED: elongation of very long chain 0.730 0.527 0.354 4e-22
322795742280 hypothetical protein SINV_08481 [Solenop 0.664 0.467 0.358 5e-22
332027038256 Elongation of very long chain fatty acid 0.664 0.511 0.371 7e-22
380015150282 PREDICTED: elongation of very long chain 0.664 0.464 0.364 4e-21
350411087284 PREDICTED: elongation of very long chain 0.664 0.461 0.371 5e-21
>gi|270009529|gb|EFA05977.1| hypothetical protein TcasGA2_TC008803 [Tribolium castaneum] Back     alignment and taxonomy information
 Score =  122 bits (307), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 65/158 (41%), Positives = 96/158 (60%), Gaps = 29/158 (18%)

Query: 1   IFFILRKKYNQVSVLHLYHHVSTLFICWWGSRYYPGGLALFPILLNSSVHIIMYTYYLIA 60
           + FILRKK+NQVS LH+YHH ST F+ W G++Y  GG++ FPI++NS +H+ MYTYYL+A
Sbjct: 127 VLFILRKKFNQVSKLHVYHHASTFFLTWIGTKYVGGGMSTFPIMINSVIHVFMYTYYLLA 186

Query: 61  NFGPKWQALVAPIKPYITIIQMVSSFTFTLCRNHEISRRLSHDPTICSQAQFTLLILMSF 120
           + GP+WQ  +A  KP +TI QMV                           QF ++I  S 
Sbjct: 187 SLGPEWQKKMAKWKPRLTIFQMV---------------------------QFCVIIAHSL 219

Query: 121 VLVSPYYCKDGPQTLAYIFLPNLVLVYYLFYQFFKRTY 158
             + P      P+ L  I++PN++LV+Y+F+QF++ +Y
Sbjct: 220 QSLHPECVV--PKQLLLIYVPNVLLVFYMFWQFYQESY 255




Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328710025|ref|XP_003244138.1| PREDICTED: elongation of very long chain fatty acids protein 4-like [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|345494828|ref|XP_001603768.2| PREDICTED: elongation of very long chain fatty acids protein AAEL008004-like [Nasonia vitripennis] Back     alignment and taxonomy information
>gi|345489465|ref|XP_001602545.2| PREDICTED: elongation of very long chain fatty acids protein 1-like [Nasonia vitripennis] Back     alignment and taxonomy information
>gi|383849164|ref|XP_003700216.1| PREDICTED: elongation of very long chain fatty acids protein 7-like [Megachile rotundata] Back     alignment and taxonomy information
>gi|193592017|ref|XP_001951537.1| PREDICTED: elongation of very long chain fatty acids protein AAEL008004-like [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|322795742|gb|EFZ18421.1| hypothetical protein SINV_08481 [Solenopsis invicta] Back     alignment and taxonomy information
>gi|332027038|gb|EGI67134.1| Elongation of very long chain fatty acids protein 7 [Acromyrmex echinatior] Back     alignment and taxonomy information
>gi|380015150|ref|XP_003691572.1| PREDICTED: elongation of very long chain fatty acids protein 4-like [Apis florea] Back     alignment and taxonomy information
>gi|350411087|ref|XP_003489235.1| PREDICTED: elongation of very long chain fatty acids protein 1-like [Bombus impatiens] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query197
FB|FBgn0260942322 bond "james bond" [Drosophila 0.411 0.251 0.487 3.9e-23
FB|FBgn0038986295 CG5278 [Drosophila melanogaste 0.416 0.277 0.506 1.6e-21
UNIPROTKB|Q3S8M4314 ELOVL4 "Elongation of very lon 0.441 0.277 0.494 1.4e-20
UNIPROTKB|Q95K73314 ELOVL4 "Elongation of very lon 0.441 0.277 0.494 1.4e-20
ZFIN|ZDB-GENE-030131-7672303 elovl4b "elongation of very lo 0.441 0.287 0.516 2.1e-20
FB|FBgn0051522365 CG31522 [Drosophila melanogast 0.416 0.224 0.469 2.8e-19
ZFIN|ZDB-GENE-030131-5485282 elovl7b "ELOVL family member 7 0.456 0.319 0.5 4e-19
ZFIN|ZDB-GENE-040426-1767309 elovl4a "elongation of very lo 0.441 0.281 0.494 5.1e-19
UNIPROTKB|F1RQL1309 F1RQL1 "Uncharacterized protei 0.441 0.281 0.505 1.4e-18
UNIPROTKB|I3LVJ0304 LOC100623120 "Uncharacterized 0.441 0.286 0.505 1.4e-18
FB|FBgn0260942 bond "james bond" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 203 (76.5 bits), Expect = 3.9e-23, Sum P(2) = 3.9e-23
 Identities = 40/82 (48%), Positives = 54/82 (65%)

Query:     2 FFILRKKYNQVSVLHLYHHVSTLFICWWGSRYYPGGLALFPILLNSSVHIIMYTYYLIAN 61
             FF+LRKK NQVS LH+YHH  T+   W   +Y PG   +   +LNS VHIIMY YY++A 
Sbjct:   131 FFVLRKKDNQVSFLHVYHHTITVLFSWGYLKYAPGEQGVIIGILNSGVHIIMYFYYMVAA 190

Query:    62 FGPKWQALVAPIKPYITIIQMV 83
              GP++Q  +   K Y+T IQ++
Sbjct:   191 MGPQYQKYLW-WKKYMTSIQLI 211


GO:0016021 "integral to membrane" evidence=IEA
GO:0000915 "cytokinesis, actomyosin contractile ring assembly" evidence=IMP
GO:0051225 "spindle assembly" evidence=IMP
GO:0007111 "cytokinesis after meiosis II" evidence=IMP
GO:0007110 "cytokinesis after meiosis I" evidence=IMP
GO:0007112 "male meiosis cytokinesis" evidence=IMP
GO:0000212 "meiotic spindle organization" evidence=IMP
FB|FBgn0038986 CG5278 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
UNIPROTKB|Q3S8M4 ELOVL4 "Elongation of very long chain fatty acids protein 4" [Macaca mulatta (taxid:9544)] Back     alignment and assigned GO terms
UNIPROTKB|Q95K73 ELOVL4 "Elongation of very long chain fatty acids protein 4" [Macaca fascicularis (taxid:9541)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-030131-7672 elovl4b "elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 4b" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
FB|FBgn0051522 CG31522 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-030131-5485 elovl7b "ELOVL family member 7, elongation of long chain fatty acids (yeast) b" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-040426-1767 elovl4a "elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 4a" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|F1RQL1 F1RQL1 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|I3LVJ0 LOC100623120 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q3S8M4ELOV4_MACMU2, ., 3, ., 1, ., n, 80.51190.41110.2579yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query197
pfam01151244 pfam01151, ELO, GNS1/SUR4 family 4e-32
PTZ00251272 PTZ00251, PTZ00251, fatty acid elongase; Provision 3e-05
>gnl|CDD|216332 pfam01151, ELO, GNS1/SUR4 family Back     alignment and domain information
 Score =  115 bits (291), Expect = 4e-32
 Identities = 50/162 (30%), Positives = 69/162 (42%), Gaps = 32/162 (19%)

Query: 1   IFFILRKKYNQVSVLHLYHHVSTLFICWWGSRYYPGGLALFPILLNSSVHIIMYTYYLIA 60
           +F +LRKK  Q+S LH+YHH + L   W G +Y PGG   F  LLNS VH+IMY YY +A
Sbjct: 105 VFLVLRKKQRQLSFLHVYHHATMLLYSWLGLKYGPGGHFWFIALLNSFVHVIMYFYYFLA 164

Query: 61  NFGPKWQALVAPIKPYITIIQMVSSFTFTLCRNHEISRRLSHDPTICSQAQFTLLILMSF 120
             G +   L    K YIT +Q++                           QF L +    
Sbjct: 165 ALGARG--LPVWWKKYITQLQII---------------------------QFVLGLAHVG 195

Query: 121 VLVSPYY---CKDGPQTLAYIFLPNLVLVYYLFYQFFKRTYL 159
             +  Y    C         + L   V   +LF  F+ ++Y 
Sbjct: 196 YALYNYTKGGCGGPFPKAVRLGLVYYVSYLFLFLNFYIKSYK 237


Members of this family are involved in long chain fatty acid elongation systems that produce the 26-carbon precursors for ceramide and sphingolipid synthesis. Predicted to be integral membrane proteins, in eukaryotes they are probably located on the endoplasmic reticulum. Yeast ELO3 affects plasma membrane H+-ATPase activity, and may act on a glucose-signaling pathway that controls the expression of several genes that are transcriptionally regulated by glucose such as PMA1. Length = 244

>gnl|CDD|140278 PTZ00251, PTZ00251, fatty acid elongase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 197
KOG3071|consensus274 100.0
PF01151250 ELO: GNS1/SUR4 family; InterPro: IPR002076 This gr 100.0
PTZ00251272 fatty acid elongase; Provisional 100.0
KOG3072|consensus282 100.0
>KOG3071|consensus Back     alignment and domain information
Probab=100.00  E-value=2.3e-42  Score=302.13  Aligned_cols=136  Identities=39%  Similarity=0.630  Sum_probs=123.1

Q ss_pred             CEEEEeeCCCceeEEeeechhhHHHHHHHhhcccCCcchhHHHHHHHHHHHHHHHHHHHHHhCCccccccccccchhhhh
Q psy10161          1 IFFILRKKYNQVSVLHLYHHVSTLFICWWGSRYYPGGLALFPILLNSSVHIIMYTYYLIANFGPKWQALVAPIKPYITII   80 (197)
Q Consensus         1 vF~VLRKK~~qlsfLHvYHH~~v~l~~w~~~~~~~~~~~~~~~~lNs~VH~iMY~YY~lsa~g~~~~~~~~~~K~~IT~l   80 (197)
                      +|+|||||.||+||||+|||++|++.||.++++.++|+.++.+.+|++||++||+||+++|+|+++++++ |||+++|.+
T Consensus       128 vFfVLRKk~rqlsFLHvyHH~~m~~~~~~~l~~~~~g~~~~~~~lNs~VHviMY~YYflsa~G~~v~~~l-WWkky~t~v  206 (274)
T KOG3071|consen  128 VFFVLRKKDRQLSFLHVYHHGVMAFLSYLWLKFYGGGHGFFAILLNSFVHVIMYGYYFLSAFGPRVQWYL-WWKKYITIV  206 (274)
T ss_pred             eeeEEEccCCceEEEEEEecchHHHhhhheeEEeCCceeeeeeehhhhHHHHHHHHHHHHhhCcCccccc-hHHHHHHHH
Confidence            6999999999999999999999999999999998889999999999999999999999999999999999 999999999


Q ss_pred             hhhhhhhcccccccccccccCCCccccccccceeeeeE-eEe-cccCCCCCCccHH-HHHHHHHHHHHHHHHHHHHhHHh
Q psy10161         81 QMVSSFTFTLCRNHEISRRLSHDPTICSQAQFTLLILM-SFV-LVSPYYCKDGPQT-LAYIFLPNLVLVYYLFYQFFKRT  157 (197)
Q Consensus        81 QIvQmf~~~~~~~~~i~~~~~~~~~~~~~~~Fv~~~~~-~~~-~~~~~~C~~~~~~-~~~~~~~~~~s~l~LF~~Fy~~s  157 (197)
                      |++|                           |++..+| .+. ++. +|| +.|.+ +++.+.+..++|+.||.|||+++
T Consensus       207 Qlvq---------------------------f~~~~~~~~~~~~~~-~~c-~~~~~~~~~~~~~~~~~~l~LF~nFY~~t  257 (274)
T KOG3071|consen  207 QLVQ---------------------------FLILFVHTLYVHLFK-PGC-CFGIGAWAFNGSVINVSFLLLFSNFYIKT  257 (274)
T ss_pred             HHHH---------------------------HHHHHHHHhheeeec-CCC-CCchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999                           7776777 444 443 578 78877 88888899999999999999999


Q ss_pred             cCCCCCCCC
Q psy10161        158 YLGTDHPNK  166 (197)
Q Consensus       158 Y~~~~~~~~  166 (197)
                      |.++++++.
T Consensus       258 Y~k~~~~~~  266 (274)
T KOG3071|consen  258 YKKPKKKKA  266 (274)
T ss_pred             hccccccch
Confidence            998665543



>PF01151 ELO: GNS1/SUR4 family; InterPro: IPR002076 This group of eukaryotic integral membrane proteins are evolutionary related, but exact function has not yet clearly been established Back     alignment and domain information
>PTZ00251 fatty acid elongase; Provisional Back     alignment and domain information
>KOG3072|consensus Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00