Psyllid ID: psy10249

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-
Protein Sequence
MGDMNYTYDRLDAANYAAFAPITWCLVFMWVIFLSYTGNAGFLGRLASWKVFLVCTRISYTFYLTQFPLFFYNVGTMRGAQQYSFGLLCAS
Secondary Structure (PSIPRED)
cccccccccHHHHHHHHHHcHHHHHHHHHHHHHHHHcccccHHcHHccccccHHcHHHHHHHHHHHHHHHHHHHHcccccccccEEEEEEc
Secondary Structure Prediction (SSPRO)
cccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHccccEEHHHHHHHHHHHHccEEEEEEccccccccHEcEEEEEcc
Coil and Loop (DISEMBL)
mgdmnytydrldaanyaafapITWCLVFMWVIFLSYtgnagflgRLASWKVFLVCTRISYTFYltqfplffynvgtmrgaqqySFGLLCAS
Flexible Loop (DISEMBL)
MGDMNYTYDRLDAANYAAFAPITWCLVFMWVIFLSYTGNAGFLGRLASWKVFLVCTRISYTFYLTQFPLFFYNVGTMRGAQQYSFGLLCAS
Low Complexity Region (SEG)
MGDMNYTYDRLDAANYAAFAPITWCLVFMWVIFLSYTGNAGFLGRLASWKVFLVCTRISYTFYLTQFPLFFYNVGTMRGAQQYSFGLLCAS
Disordered region (IsUnstruct)
*****YTYDRLDAANYAAFAPITWCLVFMWVIFLSYTGNAGFLGRLASWKVFLVCTRISYTFYLTQFPLFFYNVGTMRGAQQYSFGLLC**
Disordered Region (DISOPRED)
****NYTYDRLDAANYAAFAPITWCLVFMWVIFLSYTGNAGFLGRLASWKVFLVCTRISYTFYLTQFPLFFYNVGTMRGAQQYSFGLLCAS
Disordered Region (DISEMBL)
MGDMNYTYDRLDAANYAAFAPITWCLVFMWVIFLSYTGNAGFLGRLASWKVFLVCTRISYTFYLTQFPLFFYNVGTMRGAQQYSFGLLCAS
Disordered Region (DISPRO)
**DMNYTYDRLDAANYAAFAPITWCLVFMWVIFLSYTGNAGFLGRLASWKVFLVCTRISYTFYLTQFPLFFYNVGTMRGAQQYSFGLLCAS
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
ooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MGDMNYTYDRLDAANYAAFAPITWCLVFMWVIFLSYTGNAGFLGRLASWKVFLVCTRISYTFYLTQFPLFFYNVGTMRGAQQYSFGLLCAS
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	91
328700343	771	PREDICTED: hypothetical protein LOC10016	0.967	0.114	0.693	2e-30
383847815	745	PREDICTED: nose resistant to fluoxetine	0.934	0.114	0.593	7e-23
307187648	749	Nose resistant to fluoxetine protein 6 [	0.934	0.113	0.558	2e-21
345483792	768	PREDICTED: nose resistant to fluoxetine	0.934	0.110	0.569	5e-21
307215074	748	Nose resistant to fluoxetine protein 6 [	0.934	0.113	0.558	1e-20
332020218	641	Nose resistant to fluoxetine protein 6 [	0.934	0.132	0.534	7e-20
198476894	333	GA24043, partial [Drosophila pseudoobscu	0.912	0.249	0.542	1e-19
91083281	721	PREDICTED: similar to lots wife CG33968-	0.934	0.117	0.564	1e-19
195169279	770	GL15183 [Drosophila persimilis] gi|19410	0.912	0.107	0.542	2e-19
5815231	377	unknown [Drosophila melanogaster]	0.912	0.220	0.530	4e-19

>gi|328700343|ref|XP_001942708.2| PREDICTED: hypothetical protein LOC100165956 [Acyrthosiphon pisum]

 Score =  136 bits (342), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 61/88 (69%), Positives = 74/88 (84%)

Query: 1   MGDMNYTYDRLDAANYAAFAPITWCLVFMWVIFLSYTGNAGFLGRLASWKVFLVCTRISY 60
           MGD++Y Y+  DAANYAAFAPI WC+ F W+IF+SYTGN GF+  L SWK F+VCTR+SY
Sbjct: 624 MGDIDYVYNASDAANYAAFAPIYWCIFFSWIIFVSYTGNGGFVSSLFSWKGFIVCTRLSY 683

Query: 61  TFYLTQFPLFFYNVGTMRGAQQYSFGLL 88
           TFYLTQFP+FFYNVG+ R A +YSFGL+
Sbjct: 684 TFYLTQFPVFFYNVGSHRSALEYSFGLI 711

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383847815|ref|XP_003699548.1| PREDICTED: nose resistant to fluoxetine protein 6-like [Megachile rotundata]

 Score =  111 bits (277), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 51/86 (59%), Positives = 62/86 (72%), Gaps = 1/86 (1%)

Query: 1   MGDMNYTYDRLDAANYAAFAPITWCLVFMWVIFLSYTGNA-GFLGRLASWKVFLVCTRIS 59
           MG ++Y Y+ +DAA Y AFAPI WC +F WVI + YTGN  G+L R  SWK FL+ TRIS
Sbjct: 608 MGSISYKYNAVDAAMYNAFAPIGWCAIFAWVIIMHYTGNTNGWLSRFLSWKGFLITTRIS 667

Query: 60  YTFYLTQFPLFFYNVGTMRGAQQYSF 85
           Y  YLTQFP++FYNVG  R A+ Y F
Sbjct: 668 YAIYLTQFPIYFYNVGKTRSAEHYEF 693

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307187648|gb|EFN72620.1| Nose resistant to fluoxetine protein 6 [Camponotus floridanus]

 Score =  106 bits (264), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 48/86 (55%), Positives = 63/86 (73%), Gaps = 1/86 (1%)

Query: 1   MGDMNYTYDRLDAANYAAFAPITWCLVFMWVIFLSYTGNA-GFLGRLASWKVFLVCTRIS 59
           MG ++Y YD + AA Y AFAPI WC +F+W+    +TG++ GFL +L SW+ FL+ TRIS
Sbjct: 612 MGSIDYVYDPIHAATYNAFAPIGWCGLFLWMAVTQHTGSSNGFLNKLFSWRGFLITTRIS 671

Query: 60  YTFYLTQFPLFFYNVGTMRGAQQYSF 85
           Y  YLTQFP++FYNVG  R A+QY F
Sbjct: 672 YAIYLTQFPIYFYNVGQTRTAEQYEF 697

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345483792|ref|XP_001603690.2| PREDICTED: nose resistant to fluoxetine protein 6-like [Nasonia vitripennis]

 Score =  105 bits (261), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 49/86 (56%), Positives = 63/86 (73%), Gaps = 1/86 (1%)

Query: 1   MGDMNYTYDRLDAANYAAFAPITWCLVFMWVIFLSYTGNA-GFLGRLASWKVFLVCTRIS 59
           MGD++Y Y+ + AA Y AFAPI WC VF+WV FL++TGN  G+L R  +WK FL+ TR+S
Sbjct: 623 MGDIDYVYNPVHAATYNAFAPIGWCAVFIWVTFLAHTGNTDGWLSRFFAWKGFLITTRLS 682

Query: 60  YTFYLTQFPLFFYNVGTMRGAQQYSF 85
           Y  YLTQFP+FF+NVG  R A+   F
Sbjct: 683 YAVYLTQFPVFFFNVGQTRSAEYIGF 708

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307215074|gb|EFN89881.1| Nose resistant to fluoxetine protein 6 [Harpegnathos saltator]

 Score =  103 bits (257), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 48/86 (55%), Positives = 61/86 (70%), Gaps = 1/86 (1%)

Query: 1   MGDMNYTYDRLDAANYAAFAPITWCLVFMWVIFLSYTGNA-GFLGRLASWKVFLVCTRIS 59
           MG ++Y Y+ +DAA Y AFAPI WC  F+WVI   +TGN+ GFL R  SW+ FL+ TR+S
Sbjct: 611 MGLIDYVYNPIDAAIYNAFAPIGWCTFFLWVIVTQHTGNSNGFLSRFFSWRGFLITTRLS 670

Query: 60  YTFYLTQFPLFFYNVGTMRGAQQYSF 85
           Y  YLTQFP+FF+NVG  R A +Y  
Sbjct: 671 YAVYLTQFPIFFFNVGRTRAAMEYDI 696

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332020218|gb|EGI60662.1| Nose resistant to fluoxetine protein 6 [Acromyrmex echinatior]

 Score =  101 bits (251), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 46/86 (53%), Positives = 60/86 (69%), Gaps = 1/86 (1%)

Query: 1   MGDMNYTYDRLDAANYAAFAPITWCLVFMWVIFLSYTGNAG-FLGRLASWKVFLVCTRIS 59
           MG ++Y YD + AA Y AFAPI WC +F+W+    +TG++  FL ++ SW+ FLV TRIS
Sbjct: 504 MGSIDYVYDPIHAAAYNAFAPIGWCSLFLWIAITQHTGSSNIFLNKIFSWRGFLVTTRIS 563

Query: 60  YTFYLTQFPLFFYNVGTMRGAQQYSF 85
           Y  YLTQFP+FF+NVG  R A  Y F
Sbjct: 564 YAVYLTQFPIFFFNVGQTRTADHYEF 589

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|198476894|ref|XP_002136863.1| GA24043, partial [Drosophila pseudoobscura pseudoobscura] gi|198145195|gb|EDY71899.1| GA24043, partial [Drosophila pseudoobscura pseudoobscura]

 Score =  100 bits (249), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 45/83 (54%), Positives = 57/83 (68%)

Query: 1   MGDMNYTYDRLDAANYAAFAPITWCLVFMWVIFLSYTGNAGFLGRLASWKVFLVCTRISY 60
           MGD+NY Y+   AA YAAFAPI WCL F W++F+S+ G    L +L +W+ F V T++SY
Sbjct: 151 MGDINYVYNSTHAAIYAAFAPIAWCLFFSWIVFVSHNGYTNKLTKLFAWRGFQVSTKLSY 210

Query: 61  TFYLTQFPLFFYNVGTMRGAQQY 83
             YLTQFP+FFYNVG  R    Y
Sbjct: 211 AIYLTQFPVFFYNVGRRRHIHHY 233

Source: Drosophila pseudoobscura pseudoobscura

Species: Drosophila pseudoobscura

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91083281|ref|XP_974400.1| PREDICTED: similar to lots wife CG33968-PA [Tribolium castaneum] gi|270007725|gb|EFA04173.1| hypothetical protein TcasGA2_TC014422 [Tribolium castaneum]

 Score =  100 bits (249), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 48/85 (56%), Positives = 57/85 (67%)

Query: 1   MGDMNYTYDRLDAANYAAFAPITWCLVFMWVIFLSYTGNAGFLGRLASWKVFLVCTRISY 60
           MG ++Y Y+  DAA YAAFAPI WC  F W+IF S+ G  G + R  SW  F + T+ISY
Sbjct: 587 MGSIDYVYNPTDAAWYAAFAPILWCFSFGWIIFTSHLGYKGLVERFFSWPPFSLWTKISY 646

Query: 61  TFYLTQFPLFFYNVGTMRGAQQYSF 85
           T YLTQFP+FFYNVG  R  Q Y F
Sbjct: 647 TVYLTQFPVFFYNVGITRTTQHYGF 671

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195169279|ref|XP_002025449.1| GL15183 [Drosophila persimilis] gi|194108928|gb|EDW30971.1| GL15183 [Drosophila persimilis]

 Score = 99.8 bits (247), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 45/83 (54%), Positives = 57/83 (68%)

Query: 1   MGDMNYTYDRLDAANYAAFAPITWCLVFMWVIFLSYTGNAGFLGRLASWKVFLVCTRISY 60
           MGD+NY Y+   AA YAAFAPI WCL F W++F+S+ G    L +L +W+ F V T++SY
Sbjct: 644 MGDINYVYNSTHAAIYAAFAPIAWCLFFSWIVFVSHNGYTNKLTKLFAWRGFQVSTKLSY 703

Query: 61  TFYLTQFPLFFYNVGTMRGAQQY 83
             YLTQFP+FFYNVG  R    Y
Sbjct: 704 AIYLTQFPVFFYNVGRRRHIHHY 726

Source: Drosophila persimilis

Species: Drosophila persimilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|5815231|gb|AAD52607.1|AF173374_1 unknown [Drosophila melanogaster]

 Score = 99.0 bits (245), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 44/83 (53%), Positives = 57/83 (68%)

Query: 1   MGDMNYTYDRLDAANYAAFAPITWCLVFMWVIFLSYTGNAGFLGRLASWKVFLVCTRISY 60
           MGD+NY Y+   AA YAAFAPI WCL F W++F+S+ G    L +L +W+ F V T++SY
Sbjct: 211 MGDINYVYNSTHAAIYAAFAPIAWCLFFSWIVFVSHNGYTNKLTKLFAWRGFQVSTKLSY 270

Query: 61  TFYLTQFPLFFYNVGTMRGAQQY 83
             YLTQFP+FF+NVG  R    Y
Sbjct: 271 AIYLTQFPVFFFNVGRRRHIHHY 293

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	91
FB|FBgn0260006	827	drd "drop dead" [Drosophila me	0.912	0.100	0.530	1.7e-20

FB|FBgn0260006 drd "drop dead" [Drosophila melanogaster (taxid:7227)]

 Score = 253 (94.1 bits), Expect = 1.7e-20, P = 1.7e-20
 Identities = 44/83 (53%), Positives = 57/83 (68%)

Query:     1 MGDMNYTYDRLDAANYAAFAPITWCLVFMWVIFLSYTGNAGFLGRLASWKVFLVCTRISY 60
             MGD+NY Y+   AA YAAFAPI WCL F W++F+S+ G    L +L +W+ F V T++SY
Sbjct:   661 MGDINYVYNSTHAAIYAAFAPIAWCLFFSWIVFVSHNGYTNKLTKLFAWRGFQVSTKLSY 720

Query:    61 TFYLTQFPLFFYNVGTMRGAQQY 83
               YLTQFP+FF+NVG  R    Y
Sbjct:   721 AIYLTQFPVFFFNVGRRRHIHHY 743


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.333   0.143   0.490    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       91        91   0.00091  102 3  11 21  0.36    29
                                                     29  0.39    31


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  540 (57 KB)
  Total size of DFA:  122 KB (2080 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  8.34u 0.08s 8.42t   Elapsed:  00:00:11
  Total cpu time:  8.34u 0.08s 8.42t   Elapsed:  00:00:11
  Start:  Thu Aug 15 13:36:04 2013   End:  Thu Aug 15 13:36:15 2013

GO:0016021 "integral to membrane" evidence=ISS

GO:0048477 "oogenesis" evidence=IMP

GO:0040003 "chitin-based cuticle development" evidence=IMP

GO:0009651 "response to salt stress" evidence=NAS

GO:0016747 "transferase activity, transferring acyl groups other than amino-acyl groups" evidence=IEA

GO:0007586 "digestion" evidence=IDA;IMP

GO:0030421 "defecation" evidence=IDA

GO:0022600 "digestive system process" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	91
KOG3700|consensus	705		99.78
COG1835	386	Predicted acyltransferases [Lipid metabolism]	98.31
PF01757	340	Acyl_transf_3: Acyltransferase family; InterPro: I	97.27
PRK03854	375	opgC glucans biosynthesis protein; Provisional	96.29
PF04235	163	DUF418: Protein of unknown function (DUF418); Inte	89.97
COG3936	349	Protein involved in polysaccharide intercellular a	89.33

>KOG3700|consensus

Probab=99.78  E-value=1.5e-19  Score=144.02  Aligned_cols=79  Identities=32%  Similarity=0.568  Sum_probs=71.9

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHhhHhhhccccchhhcccccchhhhhhhHHHHHHHHHHHHHHHHhhccccceeeeeee
Q psy10249          9 DRLDAANYAAFAPITWCLVFMWVIFLSYTGNAGFLGRLASWKVFLVCTRISYTFYLTQFPLFFYNVGTMRGAQQYSFGL   87 (91)
Q Consensus         9 ~~~~~a~y~~l~R~~w~~~~~~~i~~~~~~~~~~l~~~l~~~~~~~lgrlSY~~YL~h~~vi~~~~~~~~~~~~~~~~~   87 (91)
                      +.+..|+|.+++|..|+++++|++++|.+|.+|++++||+||+|||+||+|||+|++|++|+..+.+..+...|.++..
T Consensus       557 ~~~~~a~y~~~~R~~W~lal~wvI~a~~~g~gg~i~~fls~p~wqplsrLSy~aYlvH~~v~~~~~~~~~~~~~~s~~~  635 (705)
T KOG3700|consen  557 SLFSEALYYAFSRIAWSLALSWVIFACHTGYGGPINAFLSHPLWQPLSRLSYCAYLVHMPVLYYFLGSGRPHFYSSNQV  635 (705)
T ss_pred             hHhhhHHhheeHHHHHHHHHHHHHHHhhCCCccchhhhccCcccceehhhhhHHHHHHHHHHHHHhcCCCCcccccchh
Confidence            4467889999999999999999999999999999999999999999999999999999999999999999555554443

>COG1835 Predicted acyltransferases [Lipid metabolism]

Probab=98.31  E-value=1.5e-06  Score=64.86  Aligned_cols=51  Identities=22%  Similarity=0.339  Sum_probs=38.5

Q ss_pred             HHHHHHhhHhhhccccchhhcccccchhhhhhhHHHHHHHHHHHHHHHHhhcc
Q psy10249         25 CLVFMWVIFLSYTGNAGFLGRLASWKVFLVCTRISYTFYLTQFPLFFYNVGTM   77 (91)
Q Consensus        25 ~~~~~~~i~~~~~~~~~~l~~~l~~~~~~~lgrlSY~~YL~h~~vi~~~~~~~   77 (91)
                      +++...++.++....++  ++++++|+++.+|++||++||+|+|++.......
T Consensus       272 ~l~~~~li~~~~~~~~~--~~~l~~~~~~~lG~~SYslYL~H~pv~~~~~~~~  322 (386)
T COG1835         272 SLGAALLVLAVAALVGG--SRLLSSRPLVFLGDISYSLYLWHWPVLVFLLYLV  322 (386)
T ss_pred             HHHHHHHHHhhcccccc--ccccccccHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            34444444554444444  8999999999999999999999999988765543

>PF01757 Acyl_transf_3: Acyltransferase family; InterPro: IPR002656 This entry contains a range of acyltransferase enzymes as well as yet uncharacterised proteins from Caenorhabditis elegans

Probab=97.27  E-value=0.0011  Score=45.84  Aligned_cols=27  Identities=33%  Similarity=0.572  Sum_probs=23.3

Q ss_pred             chhhhhhhHHHHHHHHHHHHHHHHhhc
Q psy10249         50 KVFLVCTRISYTFYLTQFPLFFYNVGT   76 (91)
Q Consensus        50 ~~~~~lgrlSY~~YL~h~~vi~~~~~~   76 (91)
                      |.++.+||.||++||+|.+++......
T Consensus       284 ~~l~~lg~~S~~iYl~H~~v~~~~~~~  310 (340)
T PF01757_consen  284 KILSFLGRYSYGIYLIHFPVIFILRKL  310 (340)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            899999999999999999987765443

It also includes the protein OatA. The pathogenic bacteria, Staphylococcus aureus, is able to cause persistent infections due to its ability to resist the immune defence system. Lysozyme, a cell wall-lytic enzyme, is one of the first defence compounds induced in serum and tissues after the onset of infection. S. aureus has complete resistance to lysozyme action by O-acetylating its peptidoglycan (PG) by O-acetyltransferase (OatA) [, ]. Staphylococcus bacteria are one of the only bacterial genera that are resistant to lysozyme and tend to colonise the skin and mucosa of humans and animals []. OatA is an integral membrane protein. This entry also includes NolL proteins. NolL-dependent acetylation is specific for the fucosyl penta-N-acetylglucosamine species. In addition, the NolL protein caused elevated production of lipo-chitin oligosaccharides (LCOs). The NolL protein obtained from Rhizobium loti (Mesorhizobium loti) functions as an acetyl transferase [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups

>PRK03854 opgC glucans biosynthesis protein; Provisional

Probab=96.29  E-value=0.0071  Score=44.96  Aligned_cols=26  Identities=19%  Similarity=0.179  Sum_probs=22.2

Q ss_pred             cchhhhhhhHHHHHHHHHHHHHHHHh
Q psy10249         49 WKVFLVCTRISYTFYLTQFPLFFYNV   74 (91)
Q Consensus        49 ~~~~~~lgrlSY~~YL~h~~vi~~~~   74 (91)
                      .|.++.+|+.||++||+|.+++....
T Consensus       303 ~~~l~~lg~~Sy~iYL~H~pv~~~~~  328 (375)
T PRK03854        303 SPRVTYLVNASLFIYLVHHPLTLFFG  328 (375)
T ss_pred             cHHHHHhhhhhhHHHHHHHHHHHHHH
Confidence            56789999999999999988877643

>PF04235 DUF418: Protein of unknown function (DUF418); InterPro: IPR007349 Tihs is a probable integral membrane protein

Probab=89.97  E-value=1.9  Score=28.41  Aligned_cols=26  Identities=15%  Similarity=0.089  Sum_probs=22.3

Q ss_pred             cchhhhhhhHHHHHHHHHHHHHHHHh
Q psy10249         49 WKVFLVCTRISYTFYLTQFPLFFYNV   74 (91)
Q Consensus        49 ~~~~~~lgrlSY~~YL~h~~vi~~~~   74 (91)
                      .+++.++||+|.+.|+.|-++....+
T Consensus        84 ~~~l~~~GrmaLT~Yi~qsii~~~lf  109 (163)
T PF04235_consen   84 LRPLAAVGRMALTNYILQSIIGTLLF  109 (163)
T ss_pred             HHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence            46789999999999999998876644

It is usually found associated with (IPR007299 from INTERPRO).

>COG3936 Protein involved in polysaccharide intercellular adhesin (PIA) synthesis/biofilm formation [Carbohydrate transport and metabolism]

Probab=89.33  E-value=0.48  Score=35.34  Aligned_cols=29  Identities=24%  Similarity=0.312  Sum_probs=24.9

Q ss_pred             hcccccchhhhhhhHHHHHHHHHHHHHHH
Q psy10249         44 GRLASWKVFLVCTRISYTFYLTQFPLFFY   72 (91)
Q Consensus        44 ~~~l~~~~~~~lgrlSY~~YL~h~~vi~~   72 (91)
                      +.-+++++.+.+|..||.+||+|+-++..
T Consensus       265 k~~l~~~pl~fisn~sf~IYLlH~~ilv~  293 (349)
T COG3936         265 KFRLSSKPLLFISNISFEIYLLHMKILVA  293 (349)
T ss_pred             HHHHcCCchhHhHhhHHHHHHHHHHHHHH
Confidence            44588899999999999999999977655

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00