Psyllid ID: psy10257

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160------
Protein Sequence
MYNPVATDSQLCLQSAPKGNPTYFVHTPHALMLQDVKAVITHSIHSTLNSVGGIQVLFPLFSQLDLPCDSADKKDPHLCSKLLGFICELVESSQTVQQHIIQNRGFLAISYMLQKLSREHLTLEVLGSFLRFTKHLVTCLTPNSELLLKQVSISCVIILDSFICLE
Secondary Structure (PSIPRED)
cccccccccccEEcccccccccccccccccEEEccEEEEEEccHHHHHHHHccccEEccccccccccccccccccHHHHHHHHHHHHHHHHHcHHHHHHHHHHccHHHHHHHHHccccccccHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccEEEcccccccccEEEEcccHHHcccccEEEEccHHHHHHHHcHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHccHHHHHHHHHcccHEHHHHHHHHccHHHccHHHHHHHHHHHHHHHHcccccccHHHHHHHHHEEEEEccEEEcc
Coil and Loop (DISEMBL)
mynpvatdsqlclqsapkgnptyfvhtphalmlQDVKAVITHSIHStlnsvggiQVLFPlfsqldlpcdsadkkdphLCSKLLGFICELVESSQTVQQHIIQNRGFLAISYMLQKLSREHLTLEVLGSFLRFTKHLVTcltpnselllKQVSISCVIILDSFICLE
Flexible Loop (DISEMBL)
mynpvatdSQLCLQSAPKGNPTYFVHTPHALMLQDVKAVITHSIHSTLNSVGGIQVLFPLFSQLDLPCDSADKKDPHLCSKLLGFICELVESSQTVQQHIIQNRGFLAISYMLQKLSREHLTLEVLGSFLRFTKHLVTCLTPnselllkqvsISCVIILDSFICLE
Low Complexity Region (SEG)
MYNPVATDSQLCLQSAPKGNPTYFVHTPHALMLQDVKAVITHSIHSTLNSVGGIQVLFPLFSQLDLPCDSADKKDPHLCSKLLGFICELVESSQTVQQHIIQNRGFLAISYMLQKLSREHLTLEVLGSFLRFTKHLVTCLTPNSELLLKQVSISCVIILDSFICLE
Disordered region (IsUnstruct)
*******************NPTYFVHTPHALMLQDVKAVITHSIHSTLNSVGGIQVLFPLFSQLDLPCDSADKKDPHLCSKLLGFICELVESSQTVQQHIIQNRGFLAISYMLQKLSREHLTLEVLGSFLRFTKHLVTCLTPNSELLLKQVSISCVIILDSFICL*
Disordered Region (DISOPRED)
**NPVATDSQLCLQSAPKGNPTYFVHTPHALMLQDVKAVITHSIHSTLNSVGGIQVLFPLFSQLDLPCDS**KK*PHLCSKLLGFICELVESSQTVQQHIIQNRGFLAISYMLQKLSREHLTLEVLGSFLRFTKHLVTCLTPNSELLLKQVSISCVIILDSFICLE
Disordered Region (DISEMBL)
********SQLCLQSAPKGNPTYFVHTPHALMLQDVKAVITHSIHSTLNSVGGIQVLFPLFSQLDLPCDSADKKDPHLCSKLLGFICELVESSQTVQQHIIQNRGFLAISYMLQKLSREHLTLEVLGSFLRFTKHLVTCLTPNSELLLKQVSISCVIILDSFICLE
Disordered Region (DISPRO)
MYNPVATDSQLCLQSAPKGNPTYFVHTPHALMLQDVKAVITHSIHSTLNSVGGIQVLFPLFSQLDLPCDSADKKDPHLCSKLLGFICELVESSQTVQQHIIQNRGFLAISYMLQKLSREHLTLEVLGSFLRFTKHLVTCLTPNSELLLKQVSISCVIILDSFICLE
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MYNPVATDSQLCLQSAPKGNPTYFVHTPHALMLQDVKAVITHSIHSTLNSVGGIQVLFPLFSQLDLPCDSADKKDPHLCSKLLGFICELVESSQTVQQHIIQNRGFLAISYMLQKLSREHLTLEVLGSFLRFTKHLVTCLTPNSELLLKQVSISCVIILDSFICLE
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	166	2.2.26 [Sep-21-2011]
Q9W4E2	3578	Neurobeachin OS=Drosophil	yes	N/A	0.909	0.042	0.803	5e-67
Q9ESE1	2856	Lipopolysaccharide-respon	yes	N/A	0.897	0.052	0.529	5e-38
Q8NFP9	2946	Neurobeachin OS=Homo sapi	yes	N/A	0.813	0.045	0.548	9e-38
Q9EPN1	2936	Neurobeachin OS=Mus muscu	yes	N/A	0.813	0.045	0.548	9e-38
P50851	2863	Lipopolysaccharide-respon	no	N/A	0.891	0.051	0.533	1e-37
Q19317	2507	Putative neurobeachin hom	yes	N/A	0.879	0.058	0.456	3e-21
A8XSV3	2531	Putative neurobeachin hom	N/A	N/A	0.879	0.057	0.449	7e-20
Q54U63	2491	BEACH domain-containing p	yes	N/A	0.777	0.051	0.215	0.0005

>sp|Q9W4E2|NBEA_DROME Neurobeachin OS=Drosophila melanogaster GN=rg PE=1 SV=3

 Score =  253 bits (645), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 123/153 (80%), Positives = 138/153 (90%), Gaps = 2/153 (1%)

Query: 1   MYNPVATDSQLCLQSAPKGNPTYFVHTPHALMLQDVKAVITHSIHSTLNSVGGIQVLFPL 60
           MYNPVATD QLCLQS+PKGN +YFVHTPHALMLQDVKAV+THSIH TLNS+GGIQVLFPL
Sbjct: 411 MYNPVATDGQLCLQSSPKGNVSYFVHTPHALMLQDVKAVVTHSIHCTLNSIGGIQVLFPL 470

Query: 61  FSQLDLPCDS-AD-KKDPHLCSKLLGFICELVESSQTVQQHIIQNRGFLAISYMLQKLSR 118
           FSQLD+  +   D K+DP LCSKLLGFICELVE+SQTVQQH+IQNRGFL IS+MLQ+ SR
Sbjct: 471 FSQLDMAHEGLGDIKRDPTLCSKLLGFICELVETSQTVQQHMIQNRGFLVISFMLQRSSR 530

Query: 119 EHLTLEVLGSFLRFTKHLVTCLTPNSELLLKQV 151
           EHLTLEVLGSFL  TK+LVTCL+ NS+LLLKQ+
Sbjct: 531 EHLTLEVLGSFLNLTKYLVTCLSANSDLLLKQL 563

Binds to type II regulatory subunits of protein kinase A and anchors/targets them to the membrane. May anchor the kinase to cytoskeletal and/or organelle-associated proteins. Required for correct retinal pattern formation and may function in cell fate determination through its interactions with the EGFR and Notch signaling pathways.
Drosophila melanogaster (taxid: 7227)

>sp|Q9ESE1|LRBA_MOUSE Lipopolysaccharide-responsive and beige-like anchor protein OS=Mus musculus GN=Lrba PE=1 SV=1

 Score =  156 bits (395), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 80/151 (52%), Positives = 110/151 (72%), Gaps = 2/151 (1%)

Query: 1   MYNPVATDSQLCLQSAPKGNPTYFVHTPHALMLQDVKAVITHSIHSTLNSVGGIQVLFPL 60
           MYNP ATD+QLCL+S+PK NP+ FVH+PHALMLQDVKAV+THSI S ++S+GG+QVLFPL
Sbjct: 420 MYNPRATDAQLCLESSPKDNPSIFVHSPHALMLQDVKAVLTHSIQSAMHSIGGVQVLFPL 479

Query: 61  FSQLDLPCDSADKKDPHLCSKLLGFICELVESSQTVQQHIIQNRGFLAISYMLQKLSREH 120
           F+QLD     +D+ D  +C+ LL FI EL+++S  +Q+ ++  +GFL I Y L+K S+ H
Sbjct: 480 FAQLDYKQYLSDEVDLTICTTLLAFIMELLKNSIAMQEQMLACKGFLVIGYSLEKSSKSH 539

Query: 121 LTLEVLGSFLRFTKHLVTCLTPNSELLLKQV 151
           ++  VL   L F+K+L      N   LLKQ+
Sbjct: 540 VSRAVLELCLAFSKYLSNL--QNGMPLLKQL 568

May be involved in coupling signal transduction and vesicle trafficking to enable polarized secretion and/or membrane deposition of immune effector molecules.

Mus musculus (taxid: 10090)

>sp|Q8NFP9|NBEA_HUMAN Neurobeachin OS=Homo sapiens GN=NBEA PE=1 SV=3

 Score =  155 bits (393), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 74/135 (54%), Positives = 102/135 (75%)

Query: 2   YNPVATDSQLCLQSAPKGNPTYFVHTPHALMLQDVKAVITHSIHSTLNSVGGIQVLFPLF 61
           YN  ATD+QLCL+S+PK N + FVH+PHALMLQDVKA++THSIHS ++S+GGIQVLFPLF
Sbjct: 447 YNAKATDAQLCLESSPKENASIFVHSPHALMLQDVKAIVTHSIHSAIHSIGGIQVLFPLF 506

Query: 62  SQLDLPCDSADKKDPHLCSKLLGFICELVESSQTVQQHIIQNRGFLAISYMLQKLSREHL 121
           +QLD    +  + +  +C+ LL F+ EL++SS  +Q+ ++  +GFL I Y+L+K SR H+
Sbjct: 507 AQLDNRQLNDSQVETTVCATLLAFLVELLKSSVAMQEQMLGGKGFLVIGYLLEKSSRVHI 566

Query: 122 TLEVLGSFLRFTKHL 136
           T  VL  FL F K+L
Sbjct: 567 TRAVLEQFLSFAKYL 581

Binds to type II regulatory subunits of protein kinase A and anchors/targets them to the membrane. May anchor the kinase to cytoskeletal and/or organelle-associated proteins.

Homo sapiens (taxid: 9606)

>sp|Q9EPN1|NBEA_MOUSE Neurobeachin OS=Mus musculus GN=Nbea PE=1 SV=1

 Score =  155 bits (393), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 74/135 (54%), Positives = 102/135 (75%)

Query: 2   YNPVATDSQLCLQSAPKGNPTYFVHTPHALMLQDVKAVITHSIHSTLNSVGGIQVLFPLF 61
           YN  ATD+QLCL+S+PK N + FVH+PHALMLQDVKA++THSIHS ++S+GGIQVLFPLF
Sbjct: 437 YNAKATDAQLCLESSPKENASIFVHSPHALMLQDVKAIVTHSIHSAIHSIGGIQVLFPLF 496

Query: 62  SQLDLPCDSADKKDPHLCSKLLGFICELVESSQTVQQHIIQNRGFLAISYMLQKLSREHL 121
           +QLD    +  + +  +C+ LL F+ EL++SS  +Q+ ++  +GFL I Y+L+K SR H+
Sbjct: 497 AQLDNRQLNDSQVETTVCATLLAFLVELLKSSVAMQEQMLGGKGFLVIGYLLEKSSRVHI 556

Query: 122 TLEVLGSFLRFTKHL 136
           T  VL  FL F K+L
Sbjct: 557 TRAVLEQFLSFAKYL 571

Binds to type II regulatory subunits of protein kinase A and anchors/targets them to the membrane. May anchor the kinase to cytoskeletal and/or organelle-associated proteins. May have a role in membrane trafficking.

Mus musculus (taxid: 10090)

>sp|P50851|LRBA_HUMAN Lipopolysaccharide-responsive and beige-like anchor protein OS=Homo sapiens GN=LRBA PE=1 SV=4

 Score =  155 bits (391), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 80/150 (53%), Positives = 109/150 (72%), Gaps = 2/150 (1%)

Query: 2   YNPVATDSQLCLQSAPKGNPTYFVHTPHALMLQDVKAVITHSIHSTLNSVGGIQVLFPLF 61
           YNP ATD+QLCL+S+PK NP+ FVH+PHALMLQDVKAV+THSI S ++S+GG+QVLFPLF
Sbjct: 421 YNPRATDAQLCLESSPKDNPSIFVHSPHALMLQDVKAVLTHSIQSAMHSIGGVQVLFPLF 480

Query: 62  SQLDLPCDSADKKDPHLCSKLLGFICELVESSQTVQQHIIQNRGFLAISYMLQKLSREHL 121
           +QLD     +D+ D  +CS LL FI EL+++S  +Q+ ++  +GFL I Y L+K S+ H+
Sbjct: 481 AQLDYRQYLSDEIDLTICSTLLAFIMELLKNSIAMQEQMLACKGFLVIGYSLEKSSKSHV 540

Query: 122 TLEVLGSFLRFTKHLVTCLTPNSELLLKQV 151
           +  VL   L F+K+L      N   LLKQ+
Sbjct: 541 SRAVLELCLAFSKYLSNL--QNGMPLLKQL 568

May be involved in coupling signal transduction and vesicle trafficking to enable polarized secretion and/or membrane deposition of immune effector molecules.

Homo sapiens (taxid: 9606)

>sp|Q19317|NBEA_CAEEL Putative neurobeachin homolog OS=Caenorhabditis elegans GN=sel-2 PE=2 SV=3

 Score =  101 bits (251), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 68/149 (45%), Positives = 90/149 (60%), Gaps = 3/149 (2%)

Query: 2   YNPVATDSQLCLQSAPK-GNPTYFVHTPHALMLQDVKAVITHSIHSTLNSVGGIQVLFPL 60
           Y P     QLCL + PK    TYFV  PHA+M + V+ + THSIH +L SVGGIQ+L PL
Sbjct: 518 YCPKNCHGQLCLYTPPKTAASTYFVQIPHAVMKEGVEVITTHSIHKSLQSVGGIQILLPL 577

Query: 61  FSQLDLPCDSADKKDPHLCSKLLGFICELVESSQTVQQHIIQNRGFLAISYMLQKLSREH 120
           F+Q+DLP  + +  D  +C  LL  I  L+ SSQ+ QQ +  ++GFL IS  LQK S  H
Sbjct: 578 FAQIDLPSSNDNSIDGEVCQTLLSLIALLLSSSQSSQQQLFHSKGFLIISSCLQKASPSH 637

Query: 121 LTLEVLGSFLRFTKHLVTCLTPNSELLLK 149
           L+++VL   +   K L+ C  P    LLK
Sbjct: 638 LSMKVLEQLIHIAKFLLRC--PAGGPLLK 664

Binds to type II regulatory subunits of protein kinase A and anchors/targets them to the membrane. May anchor the kinase to cytoskeletal and/or organelle-associated proteins (By similarity). Regulates endosomal traffic in polarized epithelial cells such as the vulval precursor cells and intestinal cells. Thought to act as a negative regulator of lin-12 activity in vulval precursor cells. May have a role in the internalization process from basolateral surface of polarized epithelial cells.

Caenorhabditis elegans (taxid: 6239)

>sp|A8XSV3|NBEA_CAEBR Putative neurobeachin homolog OS=Caenorhabditis briggsae GN=sel-2 PE=3 SV=1

 Score = 96.3 bits (238), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 67/149 (44%), Positives = 89/149 (59%), Gaps = 3/149 (2%)

Query: 2   YNPVATDSQLCLQSAPK-GNPTYFVHTPHALMLQDVKAVITHSIHSTLNSVGGIQVLFPL 60
           Y P     QLCL + PK    TYFV  PHA+M + V+ + THSIH +L SVGGIQ+L PL
Sbjct: 525 YCPKNCHGQLCLFTPPKTAANTYFVQIPHAVMKEGVEVITTHSIHKSLQSVGGIQILLPL 584

Query: 61  FSQLDLPCDSADKKDPHLCSKLLGFICELVESSQTVQQHIIQNRGFLAISYMLQKLSREH 120
           F+Q+DLP    +  D  +C  LL  I  L+ SSQ+ QQ +  ++GFL IS  LQ+ S  H
Sbjct: 585 FAQIDLPSSHDNTIDGDVCQTLLSLISLLLSSSQSSQQQLFHSKGFLIISSCLQEASPSH 644

Query: 121 LTLEVLGSFLRFTKHLVTCLTPNSELLLK 149
           L+++VL   +   K L+ C  P    LLK
Sbjct: 645 LSMKVLEQIIHIAKFLLRC--PAGGPLLK 671

Binds to type II regulatory subunits of protein kinase A and anchors/targets them to the membrane. May anchor the kinase to cytoskeletal and/or organelle-associated proteins. Regulates endosomal traffic in polarized epithelial cells such as the vulval precursor cells and intestinal cells. Thought to act as a negative regulator of lin-12 activity in vulval precursor cells. May have a role in the internalization process from basolateral surface of polarized epithelial cells.

Caenorhabditis briggsae (taxid: 6238)

>sp|Q54U63|LVSC_DICDI BEACH domain-containing protein lvsC OS=Dictyostelium discoideum GN=lvsC PE=4 SV=2

 Score = 43.9 bits (102), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 36/167 (21%), Positives = 69/167 (41%), Gaps = 38/167 (22%)

Query: 2   YNPVATDSQLCLQSAPK--GNPTYFVHTPHALMLQDVKAVITHSIHSTLNSVGGIQVLFP 59
           YN  A D  LCL + P   G+  Y         L  +   ++  I   +  +GGI+VLFP
Sbjct: 446 YNCRALDGDLCLDNTPDIGGDKNY------DATLVSINPCVSRDIKDIIYCLGGIKVLFP 499

Query: 60  LFSQLDLPCDSADKK------------------------------DPHLCSKLLGFICEL 89
           L  Q++ P      +                              +  L +++L     +
Sbjct: 500 LIQQINNPISPLSLELITNENNNNNNNNLSLSSQQQTLEQLQQSINIKLTNQVLALFKFM 559

Query: 90  VESSQTVQQHIIQNRGFLAISYMLQKLSREHLTLEVLGSFLRFTKHL 136
           ++ S+  Q+ +++ +GF  + Y+LQ++S E+LT+     F+  +  +
Sbjct: 560 LKESEANQEEMLRCQGFSVMGYLLQQISPEYLTIGCTNIFIDMSNQI 606

Dictyostelium discoideum (taxid: 44689)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	166
328714736	3079	PREDICTED: neurobeachin-like [Acyrthosip	0.909	0.049	0.834	7e-70
270005522	2431	hypothetical protein TcasGA2_TC007591 [T	0.909	0.062	0.832	3e-68
380022646	157	PREDICTED: neurobeachin-like [Apis flore	0.921	0.974	0.821	5e-68
345481241	3146	PREDICTED: neurobeachin-like [Nasonia vi	0.909	0.047	0.812	5e-68
350417191	3204	PREDICTED: neurobeachin-like [Bombus imp	0.909	0.047	0.812	6e-68
340715018	3204	PREDICTED: neurobeachin-like [Bombus ter	0.909	0.047	0.812	7e-68
383855622	3257	PREDICTED: neurobeachin-like [Megachile	0.909	0.046	0.812	1e-67
322794630	2330	hypothetical protein SINV_14055 [Solenop	0.909	0.064	0.812	1e-67
307205111	2412	Neurobeachin [Harpegnathos saltator]	0.909	0.062	0.812	1e-67
328788933	2942	PREDICTED: neurobeachin-like, partial [A	0.909	0.051	0.812	1e-67

>gi|328714736|ref|XP_001947075.2| PREDICTED: neurobeachin-like [Acyrthosiphon pisum]

 Score =  268 bits (684), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 126/151 (83%), Positives = 138/151 (91%)

Query: 1   MYNPVATDSQLCLQSAPKGNPTYFVHTPHALMLQDVKAVITHSIHSTLNSVGGIQVLFPL 60
           MYNPVATD QLCLQS PKGN +YFVHTPHALMLQDVKAVITHSIHSTLNSVGGIQVLFPL
Sbjct: 401 MYNPVATDGQLCLQSTPKGNASYFVHTPHALMLQDVKAVITHSIHSTLNSVGGIQVLFPL 460

Query: 61  FSQLDLPCDSADKKDPHLCSKLLGFICELVESSQTVQQHIIQNRGFLAISYMLQKLSREH 120
           F+QLDL  +  DKKD  +C KLLGFIC++VE+SQTVQQH+IQNRGFL ISYMLQ+ SR+H
Sbjct: 461 FAQLDLSAEPMDKKDASICWKLLGFICDMVETSQTVQQHMIQNRGFLVISYMLQRSSRDH 520

Query: 121 LTLEVLGSFLRFTKHLVTCLTPNSELLLKQV 151
           LTLEVLGSFLR TKHLVTCLTPN+ELLLKQ+
Sbjct: 521 LTLEVLGSFLRLTKHLVTCLTPNNELLLKQL 551

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270005522|gb|EFA01970.1| hypothetical protein TcasGA2_TC007591 [Tribolium castaneum]

 Score =  262 bits (670), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 129/155 (83%), Positives = 141/155 (90%), Gaps = 4/155 (2%)

Query: 1   MYNPVATDSQLCLQSAPKGNPTYFVHTPHALMLQDVKAVITHSIHSTLNSVGGIQVLFPL 60
           MYNPVATDSQLCLQSAPKGN +YFVHTPHALMLQDVKAVITHSIHSTLNS+GGIQVLFPL
Sbjct: 548 MYNPVATDSQLCLQSAPKGNISYFVHTPHALMLQDVKAVITHSIHSTLNSIGGIQVLFPL 607

Query: 61  FSQLDLPCD----SADKKDPHLCSKLLGFICELVESSQTVQQHIIQNRGFLAISYMLQKL 116
           FSQLDLP +    S  K+DP LCSKLLGFICELVE+SQTVQQH+IQNRGFL IS+MLQ+ 
Sbjct: 608 FSQLDLPYETNGSSDSKRDPTLCSKLLGFICELVETSQTVQQHMIQNRGFLVISFMLQRS 667

Query: 117 SREHLTLEVLGSFLRFTKHLVTCLTPNSELLLKQV 151
           SREHLTL+VLGSFL  TK+LVTCL+ NSELLLKQ+
Sbjct: 668 SREHLTLDVLGSFLSLTKYLVTCLSANSELLLKQL 702

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380022646|ref|XP_003695150.1| PREDICTED: neurobeachin-like [Apis florea]

 Score =  261 bits (668), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 129/157 (82%), Positives = 141/157 (89%), Gaps = 4/157 (2%)

Query: 1   MYNPVATDSQLCLQSAPKGNPTYFVHTPHALMLQDVKAVITHSIHSTLNSVGGIQVLFPL 60
           MYNPVATDSQLCLQSAPKGN +YFVHTPHALMLQDVKAVITHSIHSTLNS+GGIQVLFPL
Sbjct: 1   MYNPVATDSQLCLQSAPKGNVSYFVHTPHALMLQDVKAVITHSIHSTLNSIGGIQVLFPL 60

Query: 61  FSQLDLPCD----SADKKDPHLCSKLLGFICELVESSQTVQQHIIQNRGFLAISYMLQKL 116
           FSQLD+P D    +  K+DP LCSKLLGFIC+LVESSQTVQQH++QNRGFL ISYMLQ+ 
Sbjct: 61  FSQLDMPYDCIAPNDVKRDPTLCSKLLGFICDLVESSQTVQQHMVQNRGFLVISYMLQRA 120

Query: 117 SREHLTLEVLGSFLRFTKHLVTCLTPNSELLLKQVSI 153
           SR+HLT EVL SFL  TKHLVTCL+ NS+LLLKQVSI
Sbjct: 121 SRDHLTTEVLASFLELTKHLVTCLSANSDLLLKQVSI 157

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345481241|ref|XP_001602669.2| PREDICTED: neurobeachin-like [Nasonia vitripennis]

 Score =  261 bits (668), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 126/155 (81%), Positives = 139/155 (89%), Gaps = 4/155 (2%)

Query: 1   MYNPVATDSQLCLQSAPKGNPTYFVHTPHALMLQDVKAVITHSIHSTLNSVGGIQVLFPL 60
           MYNPVATDSQLCLQSAPKGN +YFVHTPHALMLQDVKAVITHSIHSTLNS+GGIQVLFPL
Sbjct: 386 MYNPVATDSQLCLQSAPKGNVSYFVHTPHALMLQDVKAVITHSIHSTLNSIGGIQVLFPL 445

Query: 61  FSQLDLPCD----SADKKDPHLCSKLLGFICELVESSQTVQQHIIQNRGFLAISYMLQKL 116
           FSQLD+P D    +  K+DP LCSKLLGFIC+LVESSQTVQQH++QNRGFL ISYMLQ+ 
Sbjct: 446 FSQLDMPYDCIAPNDIKRDPTLCSKLLGFICDLVESSQTVQQHMVQNRGFLVISYMLQRA 505

Query: 117 SREHLTLEVLGSFLRFTKHLVTCLTPNSELLLKQV 151
           SR+HLT EVL SFL  TKHLVTCL+ NS+LLLKQ+
Sbjct: 506 SRDHLTTEVLASFLELTKHLVTCLSANSDLLLKQL 540

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350417191|ref|XP_003491301.1| PREDICTED: neurobeachin-like [Bombus impatiens]

 Score =  261 bits (667), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 126/155 (81%), Positives = 139/155 (89%), Gaps = 4/155 (2%)

Query: 1   MYNPVATDSQLCLQSAPKGNPTYFVHTPHALMLQDVKAVITHSIHSTLNSVGGIQVLFPL 60
           MYNPVATDSQLCLQSAPKGN +YFVHTPHALMLQDVKAVITHSIHSTLNS+GGIQVLFPL
Sbjct: 418 MYNPVATDSQLCLQSAPKGNVSYFVHTPHALMLQDVKAVITHSIHSTLNSIGGIQVLFPL 477

Query: 61  FSQLDLPCD----SADKKDPHLCSKLLGFICELVESSQTVQQHIIQNRGFLAISYMLQKL 116
           FSQLD+P D    +  K+DP LCSKLLGFIC+LVESSQTVQQH++QNRGFL ISYMLQ+ 
Sbjct: 478 FSQLDMPYDCIAPNDVKRDPTLCSKLLGFICDLVESSQTVQQHMVQNRGFLVISYMLQRA 537

Query: 117 SREHLTLEVLGSFLRFTKHLVTCLTPNSELLLKQV 151
           SR+HLT EVL SFL  TKHLVTCL+ NS+LLLKQ+
Sbjct: 538 SRDHLTTEVLASFLELTKHLVTCLSANSDLLLKQL 572

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340715018|ref|XP_003396018.1| PREDICTED: neurobeachin-like [Bombus terrestris]

 Score =  261 bits (667), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 126/155 (81%), Positives = 139/155 (89%), Gaps = 4/155 (2%)

Query: 1   MYNPVATDSQLCLQSAPKGNPTYFVHTPHALMLQDVKAVITHSIHSTLNSVGGIQVLFPL 60
           MYNPVATDSQLCLQSAPKGN +YFVHTPHALMLQDVKAVITHSIHSTLNS+GGIQVLFPL
Sbjct: 418 MYNPVATDSQLCLQSAPKGNVSYFVHTPHALMLQDVKAVITHSIHSTLNSIGGIQVLFPL 477

Query: 61  FSQLDLPCD----SADKKDPHLCSKLLGFICELVESSQTVQQHIIQNRGFLAISYMLQKL 116
           FSQLD+P D    +  K+DP LCSKLLGFIC+LVESSQTVQQH++QNRGFL ISYMLQ+ 
Sbjct: 478 FSQLDMPYDCIAPNDVKRDPTLCSKLLGFICDLVESSQTVQQHMVQNRGFLVISYMLQRA 537

Query: 117 SREHLTLEVLGSFLRFTKHLVTCLTPNSELLLKQV 151
           SR+HLT EVL SFL  TKHLVTCL+ NS+LLLKQ+
Sbjct: 538 SRDHLTTEVLASFLELTKHLVTCLSANSDLLLKQL 572

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383855622|ref|XP_003703309.1| PREDICTED: neurobeachin-like [Megachile rotundata]

 Score =  260 bits (665), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 126/155 (81%), Positives = 139/155 (89%), Gaps = 4/155 (2%)

Query: 1   MYNPVATDSQLCLQSAPKGNPTYFVHTPHALMLQDVKAVITHSIHSTLNSVGGIQVLFPL 60
           MYNPVATDSQLCLQSAPKGN +YFVHTPHALMLQDVKAVITHSIHSTLNS+GGIQVLFPL
Sbjct: 401 MYNPVATDSQLCLQSAPKGNVSYFVHTPHALMLQDVKAVITHSIHSTLNSIGGIQVLFPL 460

Query: 61  FSQLDLPCD----SADKKDPHLCSKLLGFICELVESSQTVQQHIIQNRGFLAISYMLQKL 116
           FSQLD+P D    +  K+DP LCSKLLGFIC+LVESSQTVQQH++QNRGFL ISYMLQ+ 
Sbjct: 461 FSQLDMPYDCIAPNDVKRDPTLCSKLLGFICDLVESSQTVQQHMVQNRGFLVISYMLQRA 520

Query: 117 SREHLTLEVLGSFLRFTKHLVTCLTPNSELLLKQV 151
           SR+HLT EVL SFL  TKHLVTCL+ NS+LLLKQ+
Sbjct: 521 SRDHLTTEVLASFLELTKHLVTCLSANSDLLLKQL 555

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322794630|gb|EFZ17638.1| hypothetical protein SINV_14055 [Solenopsis invicta]

 Score =  260 bits (665), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 126/155 (81%), Positives = 139/155 (89%), Gaps = 4/155 (2%)

Query: 1   MYNPVATDSQLCLQSAPKGNPTYFVHTPHALMLQDVKAVITHSIHSTLNSVGGIQVLFPL 60
           MYNPVATDSQLCLQSAPKGN +YFVHTPHALMLQDVKAVITHSIHSTLNS+GGIQVLFPL
Sbjct: 271 MYNPVATDSQLCLQSAPKGNISYFVHTPHALMLQDVKAVITHSIHSTLNSIGGIQVLFPL 330

Query: 61  FSQLDLPCD----SADKKDPHLCSKLLGFICELVESSQTVQQHIIQNRGFLAISYMLQKL 116
           FSQLD+P D    +  K+DP LCSKLLGFIC+LVESSQTVQQH++QNRGFL IS+MLQK 
Sbjct: 331 FSQLDMPYDCIAPNDIKRDPTLCSKLLGFICDLVESSQTVQQHMVQNRGFLVISFMLQKA 390

Query: 117 SREHLTLEVLGSFLRFTKHLVTCLTPNSELLLKQV 151
           SR+HLT EVL SFL  TKHLVTCL+ NS+LLLKQ+
Sbjct: 391 SRDHLTTEVLASFLELTKHLVTCLSANSDLLLKQL 425

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307205111|gb|EFN83576.1| Neurobeachin [Harpegnathos saltator]

 Score =  260 bits (664), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 126/155 (81%), Positives = 139/155 (89%), Gaps = 4/155 (2%)

Query: 1   MYNPVATDSQLCLQSAPKGNPTYFVHTPHALMLQDVKAVITHSIHSTLNSVGGIQVLFPL 60
           MYNPVATDSQLCLQSAPKGN +YFVHTPHALMLQDVKAVITHSIHSTLNS+GGIQVLFPL
Sbjct: 250 MYNPVATDSQLCLQSAPKGNVSYFVHTPHALMLQDVKAVITHSIHSTLNSIGGIQVLFPL 309

Query: 61  FSQLDLPCD----SADKKDPHLCSKLLGFICELVESSQTVQQHIIQNRGFLAISYMLQKL 116
           FSQLD+P D    +  K+DP LCSKLLGFIC+LVESSQTVQQH++QNRGFL IS+MLQK 
Sbjct: 310 FSQLDMPYDCIAPNDVKRDPTLCSKLLGFICDLVESSQTVQQHMVQNRGFLVISFMLQKA 369

Query: 117 SREHLTLEVLGSFLRFTKHLVTCLTPNSELLLKQV 151
           SR+HLT EVL SFL  TKHLVTCL+ NS+LLLKQ+
Sbjct: 370 SRDHLTTEVLASFLELTKHLVTCLSANSDLLLKQL 404

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328788933|ref|XP_003251209.1| PREDICTED: neurobeachin-like, partial [Apis mellifera]

 Score =  260 bits (664), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 126/155 (81%), Positives = 139/155 (89%), Gaps = 4/155 (2%)

Query: 1   MYNPVATDSQLCLQSAPKGNPTYFVHTPHALMLQDVKAVITHSIHSTLNSVGGIQVLFPL 60
           MYNPVATDSQLCLQSAPKGN +YFVHTPHALMLQDVKAVITHSIHSTLNS+GGIQVLFPL
Sbjct: 348 MYNPVATDSQLCLQSAPKGNVSYFVHTPHALMLQDVKAVITHSIHSTLNSIGGIQVLFPL 407

Query: 61  FSQLDLPCD----SADKKDPHLCSKLLGFICELVESSQTVQQHIIQNRGFLAISYMLQKL 116
           FSQLD+P D    +  K+DP LCSKLLGFIC+LVESSQTVQQH++QNRGFL ISYMLQ+ 
Sbjct: 408 FSQLDMPYDCIAPNDVKRDPTLCSKLLGFICDLVESSQTVQQHMVQNRGFLVISYMLQRA 467

Query: 117 SREHLTLEVLGSFLRFTKHLVTCLTPNSELLLKQV 151
           SR+HLT EVL SFL  TKHLVTCL+ NS+LLLKQ+
Sbjct: 468 SRDHLTTEVLASFLELTKHLVTCLSANSDLLLKQL 502

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	166
FB|FBgn0086911	3578	rg "rugose" [Drosophila melano	0.909	0.042	0.803	6.4e-60
UNIPROTKB|E1BND6	2786	Bt.111067 "Uncharacterized pro	0.891	0.053	0.546	9.8e-36
MGI|MGI:1933162	2856	Lrba "LPS-responsive beige-lik	0.897	0.052	0.529	4.4e-35
UNIPROTKB|F1P3D0	2855	NBEA "Neurobeachin" [Gallus ga	0.813	0.047	0.555	6e-35
UNIPROTKB|P50851	2863	LRBA "Lipopolysaccharide-respo	0.891	0.051	0.533	1.2e-34
UNIPROTKB|F1MF64	2809	NBEA "Uncharacterized protein"	0.813	0.048	0.548	2.5e-34
MGI|MGI:1347075	2936	Nbea "neurobeachin" [Mus muscu	0.813	0.045	0.548	2.7e-34
UNIPROTKB|Q8NFP9	2946	NBEA "Neurobeachin" [Homo sapi	0.813	0.045	0.548	2.8e-34
RGD|1311428	2709	Lrba "LPS-responsive vesicle t	0.891	0.054	0.526	7.7e-34
UNIPROTKB|E1C6E6	2850	LRBA "Uncharacterized protein"	0.897	0.052	0.480	3.2e-27

FB|FBgn0086911 rg "rugose" [Drosophila melanogaster (taxid:7227)]

 Score = 632 (227.5 bits), Expect = 6.4e-60, P = 6.4e-60
 Identities = 123/153 (80%), Positives = 138/153 (90%)

Query:     1 MYNPVATDSQLCLQSAPKGNPTYFVHTPHALMLQDVKAVITHSIHSTLNSVGGIQVLFPL 60
             MYNPVATD QLCLQS+PKGN +YFVHTPHALMLQDVKAV+THSIH TLNS+GGIQVLFPL
Sbjct:   411 MYNPVATDGQLCLQSSPKGNVSYFVHTPHALMLQDVKAVVTHSIHCTLNSIGGIQVLFPL 470

Query:    61 FSQLDLPCDS-AD-KKDPHLCSKLLGFICELVESSQTVQQHIIQNRGFLAISYMLQKLSR 118
             FSQLD+  +   D K+DP LCSKLLGFICELVE+SQTVQQH+IQNRGFL IS+MLQ+ SR
Sbjct:   471 FSQLDMAHEGLGDIKRDPTLCSKLLGFICELVETSQTVQQHMIQNRGFLVISFMLQRSSR 530

Query:   119 EHLTLEVLGSFLRFTKHLVTCLTPNSELLLKQV 151
             EHLTLEVLGSFL  TK+LVTCL+ NS+LLLKQ+
Sbjct:   531 EHLTLEVLGSFLNLTKYLVTCLSANSDLLLKQL 563

GO:0016021 "integral to membrane" evidence=IDA

GO:0008104 "protein localization" evidence=NAS;IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0051018 "protein kinase A binding" evidence=NAS;IDA

GO:0042675 "compound eye cone cell differentiation" evidence=IMP

GO:0007528 "neuromuscular junction development" evidence=IMP

GO:0008355 "olfactory learning" evidence=IMP

GO:0043025 "neuronal cell body" evidence=IDA

GO:0016319 "mushroom body development" evidence=IMP

UNIPROTKB|E1BND6 Bt.111067 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 403 (146.9 bits), Expect = 9.8e-36, P = 9.8e-36
 Identities = 82/150 (54%), Positives = 110/150 (73%)

Query:     2 YNPVATDSQLCLQSAPKGNPTYFVHTPHALMLQDVKAVITHSIHSTLNSVGGIQVLFPLF 61
             YNP ATD+QLCL+S+PK NP+ FVH+PHALMLQDVKAV+THSI S ++SVGG+QVLFPLF
Sbjct:   349 YNPRATDAQLCLESSPKDNPSIFVHSPHALMLQDVKAVLTHSIQSAMHSVGGVQVLFPLF 408

Query:    62 SQLDLPCDSADKKDPHLCSKLLGFICELVESSQTVQQHIIQNRGFLAISYMLQKLSREHL 121
             +QLD     +D+ D  +CS LL FI EL+++S  +Q+ ++  +GFL I Y L+K S+ H+
Sbjct:   409 AQLDYKQYLSDEIDSTICSTLLAFIMELLKNSIAMQEQMLACKGFLVIGYSLEKSSKSHV 468

Query:   122 TLEVLGSFLRFTKHLVTCLTPNSELLLKQV 151
             +  VL   L F+K+L     PN   LLKQ+
Sbjct:   469 SRAVLELCLVFSKYLSNL--PNGMPLLKQL 496

GO:0016023 "cytoplasmic membrane-bounded vesicle" evidence=IEA

MGI|MGI:1933162 Lrba "LPS-responsive beige-like anchor" [Mus musculus (taxid:10090)]

 Score = 397 (144.8 bits), Expect = 4.4e-35, P = 4.4e-35
 Identities = 80/151 (52%), Positives = 110/151 (72%)

Query:     1 MYNPVATDSQLCLQSAPKGNPTYFVHTPHALMLQDVKAVITHSIHSTLNSVGGIQVLFPL 60
             MYNP ATD+QLCL+S+PK NP+ FVH+PHALMLQDVKAV+THSI S ++S+GG+QVLFPL
Sbjct:   420 MYNPRATDAQLCLESSPKDNPSIFVHSPHALMLQDVKAVLTHSIQSAMHSIGGVQVLFPL 479

Query:    61 FSQLDLPCDSADKKDPHLCSKLLGFICELVESSQTVQQHIIQNRGFLAISYMLQKLSREH 120
             F+QLD     +D+ D  +C+ LL FI EL+++S  +Q+ ++  +GFL I Y L+K S+ H
Sbjct:   480 FAQLDYKQYLSDEVDLTICTTLLAFIMELLKNSIAMQEQMLACKGFLVIGYSLEKSSKSH 539

Query:   121 LTLEVLGSFLRFTKHLVTCLTPNSELLLKQV 151
             ++  VL   L F+K+L      N   LLKQ+
Sbjct:   540 VSRAVLELCLAFSKYLSNL--QNGMPLLKQL 568

GO:0005764 "lysosome" evidence=IDA

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0005802 "trans-Golgi network" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0007165 "signal transduction" evidence=TAS

GO:0008104 "protein localization" evidence=ISA

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016023 "cytoplasmic membrane-bounded vesicle" evidence=IDA

GO:0016197 "endosomal transport" evidence=TAS

GO:0051018 "protein kinase A binding" evidence=ISA

UNIPROTKB|F1P3D0 NBEA "Neurobeachin" [Gallus gallus (taxid:9031)]

 Score = 395 (144.1 bits), Expect = 6.0e-35, Sum P(2) = 6.0e-35
 Identities = 75/135 (55%), Positives = 102/135 (75%)

Query:     2 YNPVATDSQLCLQSAPKGNPTYFVHTPHALMLQDVKAVITHSIHSTLNSVGGIQVLFPLF 61
             YN  ATD+QLCL+S+PK NP+ FVH+PHALMLQDVKA++THSIHS ++S+GGIQVLFPLF
Sbjct:   349 YNAKATDAQLCLESSPKENPSIFVHSPHALMLQDVKAIVTHSIHSAIHSIGGIQVLFPLF 408

Query:    62 SQLDLPCDSADKKDPHLCSKLLGFICELVESSQTVQQHIIQNRGFLAISYMLQKLSREHL 121
             +QLD       + +  +C+ LL F+ EL++SS  +Q+ ++  +GFL I Y+L+K SR H+
Sbjct:   409 AQLDNRQLHDSQVETTVCATLLAFLVELLKSSVAMQEQMLGGKGFLVIGYLLEKSSRVHI 468

Query:   122 TLEVLGSFLRFTKHL 136
             T  VL  FL F K+L
Sbjct:   469 TRAVLEQFLSFAKYL 483

GO:0005802 "trans-Golgi network" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0008104 "protein localization" evidence=IEA

GO:0012505 "endomembrane system" evidence=IEA

GO:0019901 "protein kinase binding" evidence=IEA

UNIPROTKB|P50851 LRBA "Lipopolysaccharide-responsive and beige-like anchor protein" [Homo sapiens (taxid:9606)]

 Score = 393 (143.4 bits), Expect = 1.2e-34, P = 1.2e-34
 Identities = 80/150 (53%), Positives = 109/150 (72%)

Query:     2 YNPVATDSQLCLQSAPKGNPTYFVHTPHALMLQDVKAVITHSIHSTLNSVGGIQVLFPLF 61
             YNP ATD+QLCL+S+PK NP+ FVH+PHALMLQDVKAV+THSI S ++S+GG+QVLFPLF
Sbjct:   421 YNPRATDAQLCLESSPKDNPSIFVHSPHALMLQDVKAVLTHSIQSAMHSIGGVQVLFPLF 480

Query:    62 SQLDLPCDSADKKDPHLCSKLLGFICELVESSQTVQQHIIQNRGFLAISYMLQKLSREHL 121
             +QLD     +D+ D  +CS LL FI EL+++S  +Q+ ++  +GFL I Y L+K S+ H+
Sbjct:   481 AQLDYRQYLSDEIDLTICSTLLAFIMELLKNSIAMQEQMLACKGFLVIGYSLEKSSKSHV 540

Query:   122 TLEVLGSFLRFTKHLVTCLTPNSELLLKQV 151
             +  VL   L F+K+L      N   LLKQ+
Sbjct:   541 SRAVLELCLAFSKYLSNL--QNGMPLLKQL 568

GO:0016021 "integral to membrane" evidence=IEA

GO:0016023 "cytoplasmic membrane-bounded vesicle" evidence=IEA

GO:0005764 "lysosome" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0003674 "molecular_function" evidence=ND

UNIPROTKB|F1MF64 NBEA "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 389 (142.0 bits), Expect = 2.5e-34, Sum P(2) = 2.5e-34
 Identities = 74/135 (54%), Positives = 102/135 (75%)

Query:     2 YNPVATDSQLCLQSAPKGNPTYFVHTPHALMLQDVKAVITHSIHSTLNSVGGIQVLFPLF 61
             YN  ATD+QLCL+S+PK N + FVH+PHALMLQDVKA++THSIHS ++S+GGIQVLFPLF
Sbjct:   353 YNAKATDAQLCLESSPKENASIFVHSPHALMLQDVKAIVTHSIHSAIHSIGGIQVLFPLF 412

Query:    62 SQLDLPCDSADKKDPHLCSKLLGFICELVESSQTVQQHIIQNRGFLAISYMLQKLSREHL 121
             +QLD    +  + +  +C+ LL F+ EL++SS  +Q+ ++  +GFL I Y+L+K SR H+
Sbjct:   413 AQLDNRQLNDSQVETTVCATLLAFLVELLKSSVAMQEQMLGGKGFLVIGYLLEKSSRVHI 472

Query:   122 TLEVLGSFLRFTKHL 136
             T  VL  FL F K+L
Sbjct:   473 TRAVLEQFLSFAKYL 487

GO:0019901 "protein kinase binding" evidence=IEA

GO:0012505 "endomembrane system" evidence=IEA

GO:0008104 "protein localization" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0005802 "trans-Golgi network" evidence=IEA

MGI|MGI:1347075 Nbea "neurobeachin" [Mus musculus (taxid:10090)]

 Score = 389 (142.0 bits), Expect = 2.7e-34, Sum P(2) = 2.7e-34
 Identities = 74/135 (54%), Positives = 102/135 (75%)

Query:     2 YNPVATDSQLCLQSAPKGNPTYFVHTPHALMLQDVKAVITHSIHSTLNSVGGIQVLFPLF 61
             YN  ATD+QLCL+S+PK N + FVH+PHALMLQDVKA++THSIHS ++S+GGIQVLFPLF
Sbjct:   437 YNAKATDAQLCLESSPKENASIFVHSPHALMLQDVKAIVTHSIHSAIHSIGGIQVLFPLF 496

Query:    62 SQLDLPCDSADKKDPHLCSKLLGFICELVESSQTVQQHIIQNRGFLAISYMLQKLSREHL 121
             +QLD    +  + +  +C+ LL F+ EL++SS  +Q+ ++  +GFL I Y+L+K SR H+
Sbjct:   497 AQLDNRQLNDSQVETTVCATLLAFLVELLKSSVAMQEQMLGGKGFLVIGYLLEKSSRVHI 556

Query:   122 TLEVLGSFLRFTKHL 136
             T  VL  FL F K+L
Sbjct:   557 TRAVLEQFLSFAKYL 571

GO:0005802 "trans-Golgi network" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0006605 "protein targeting" evidence=ISS

GO:0006892 "post-Golgi vesicle-mediated transport" evidence=NAS

GO:0008104 "protein localization" evidence=IDA

GO:0012505 "endomembrane system" evidence=IDA

GO:0016020 "membrane" evidence=IEA

GO:0019901 "protein kinase binding" evidence=IDA

GO:0030054 "cell junction" evidence=IEA

GO:0045202 "synapse" evidence=IEA

GO:0045211 "postsynaptic membrane" evidence=NAS

GO:0051018 "protein kinase A binding" evidence=NAS

UNIPROTKB|Q8NFP9 NBEA "Neurobeachin" [Homo sapiens (taxid:9606)]

 Score = 389 (142.0 bits), Expect = 2.8e-34, Sum P(2) = 2.8e-34
 Identities = 74/135 (54%), Positives = 102/135 (75%)

Query:     2 YNPVATDSQLCLQSAPKGNPTYFVHTPHALMLQDVKAVITHSIHSTLNSVGGIQVLFPLF 61
             YN  ATD+QLCL+S+PK N + FVH+PHALMLQDVKA++THSIHS ++S+GGIQVLFPLF
Sbjct:   447 YNAKATDAQLCLESSPKENASIFVHSPHALMLQDVKAIVTHSIHSAIHSIGGIQVLFPLF 506

Query:    62 SQLDLPCDSADKKDPHLCSKLLGFICELVESSQTVQQHIIQNRGFLAISYMLQKLSREHL 121
             +QLD    +  + +  +C+ LL F+ EL++SS  +Q+ ++  +GFL I Y+L+K SR H+
Sbjct:   507 AQLDNRQLNDSQVETTVCATLLAFLVELLKSSVAMQEQMLGGKGFLVIGYLLEKSSRVHI 566

Query:   122 TLEVLGSFLRFTKHL 136
             T  VL  FL F K+L
Sbjct:   567 TRAVLEQFLSFAKYL 581

GO:0008104 "protein localization" evidence=IEA

GO:0019901 "protein kinase binding" evidence=IEA

GO:0005829 "cytosol" evidence=ISS

GO:0012505 "endomembrane system" evidence=ISS

GO:0005886 "plasma membrane" evidence=ISS

GO:0005802 "trans-Golgi network" evidence=ISS

RGD|1311428 Lrba "LPS-responsive vesicle trafficking, beach and anchor containing" [Rattus norvegicus (taxid:10116)]

 Score = 385 (140.6 bits), Expect = 7.7e-34, P = 7.7e-34
 Identities = 79/150 (52%), Positives = 108/150 (72%)

Query:     2 YNPVATDSQLCLQSAPKGNPTYFVHTPHALMLQDVKAVITHSIHSTLNSVGGIQVLFPLF 61
             YN  ATD+QLCL+S+PK NP+ FVH+PHALMLQDVKAV+THSI S ++SVGG+QVLFPLF
Sbjct:   273 YNARATDAQLCLESSPKDNPSIFVHSPHALMLQDVKAVLTHSIQSAMHSVGGVQVLFPLF 332

Query:    62 SQLDLPCDSADKKDPHLCSKLLGFICELVESSQTVQQHIIQNRGFLAISYMLQKLSREHL 121
             +QLD     +D+ D  +C+ LL FI EL+++S  +Q+ ++  +GFL I Y L+K S+ H+
Sbjct:   333 AQLDYRQYLSDEVDLTICTTLLAFIMELLKNSVAMQEQMLACKGFLVIGYSLEKSSKSHV 392

Query:   122 TLEVLGSFLRFTKHLVTCLTPNSELLLKQV 151
             +  VL   L F+K+L      N   LLKQ+
Sbjct:   393 SRAVLELCLAFSKYLSNL--QNGMPLLKQL 420

GO:0005764 "lysosome" evidence=ISO

GO:0005783 "endoplasmic reticulum" evidence=ISO

GO:0005802 "trans-Golgi network" evidence=ISO

GO:0005886 "plasma membrane" evidence=ISO

GO:0016023 "cytoplasmic membrane-bounded vesicle" evidence=ISO

UNIPROTKB|E1C6E6 LRBA "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 323 (118.8 bits), Expect = 3.2e-27, P = 3.2e-27
 Identities = 73/152 (48%), Positives = 98/152 (64%)

Query:     1 MYNPVATDSQLCLQSAPKGNPTYFVHTPHALMLQ-DVKAVITHSIHSTLNSVGGIQVLFP 59
             MYNP ATD+QLCL+S+PK NP+ FVH+PHALMLQ DVKAV+THS+ S L+S+GG+QVLFP
Sbjct:   420 MYNPRATDAQLCLESSPKDNPSIFVHSPHALMLQQDVKAVLTHSVQSALHSIGGVQVLFP 479

Query:    60 LFSQLDLPCDSADKKDPHLCSKLLGFICELVESSQTVQQHIIQNRGFLAISYMLQKLSRE 119
             LF+QLD    S+D  D  +C+ L  F     + S  +    I    +  ++Y L + S+ 
Sbjct:   480 LFAQLDYRQYSSDHIDTTVCTILPIFFLSQKKKSIGLDNFAIACLEYKVLTYFLLQSSKA 539

Query:   120 HLTLEVLGSFLRFTKHLVTCLTPNSELLLKQV 151
             H+T  VL   L F+K+L      N   LLKQ+
Sbjct:   540 HVTRAVLELCLAFSKYLSNL--HNGVPLLKQL 569

GO:0016023 "cytoplasmic membrane-bounded vesicle" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9W4E2	NBEA_DROME	No assigned EC number	0.8039	0.9096	0.0422	yes	N/A
Q8NFP9	NBEA_HUMAN	No assigned EC number	0.5481	0.8132	0.0458	yes	N/A
Q9EPN1	NBEA_MOUSE	No assigned EC number	0.5481	0.8132	0.0459	yes	N/A
Q9ESE1	LRBA_MOUSE	No assigned EC number	0.5298	0.8975	0.0521	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	166
PF08045	257	CDC14: Cell division control protein 14, SIN compo	90.82
KOG2160|consensus	342		88.82

>PF08045 CDC14: Cell division control protein 14, SIN component; InterPro: IPR012535 Cdc14 is a component of the septation initiation network (SIN) and is required for the localisation and activity of Sid1

Probab=90.82  E-value=1.3  Score=38.22  Aligned_cols=67  Identities=16%  Similarity=0.237  Sum_probs=53.0

Q ss_pred             chHHHHHhcCCccchhhhhhccCCCCCCCCCCChhhHHHHHHHHHHHHhhChHHHHHHHhcccHHHHHHHHhcCCc
Q psy10257         43 SIHSTLNSVGGIQVLFPLFSQLDLPCDSADKKDPHLCSKLLGFICELVESSQTVQQHIIQNRGFLAISYMLQKLSR  118 (166)
Q Consensus        43 sikd~l~~IGGi~VLfPLf~Qld~~~~~~~~~dp~~~~~lL~ll~~lL~~s~~nQeqm~~~~Gf~iIg~LLqkvsp  118 (166)
                      .=+...+.-.++++|..|++         ...+|.+..+.|..+...+..+|.|+..|-+.+|+.+|.-++...+.
T Consensus       124 ~Sr~lF~r~~~m~lll~LL~---------~~~~~~i~~a~L~tLv~iLld~p~N~r~FE~~~Gl~~v~~llk~~~~  190 (257)
T PF08045_consen  124 PSRKLFHREQNMELLLDLLS---------PSNPPAIQSACLDTLVCILLDSPENQRDFEELNGLSTVCSLLKSKST  190 (257)
T ss_pred             hHHHHHhhhhhHHHHHHHhc---------cCCCchHHHHHHHHHHHHHHcChHHHHHHHHhCCHHHHHHHHccccc
Confidence            34566677788888888882         22346677777877788899999999999999999999999987554

Sid1 is a protein kinase that localises asymmetrically to one spindle pole body (SPB) in anaphase disappears prior to cell separation [], [].

>KOG2160|consensus

Probab=88.82  E-value=1.7  Score=39.12  Aligned_cols=78  Identities=18%  Similarity=0.233  Sum_probs=58.1

Q ss_pred             HHhcCCccchhhhhhccCCCCCCCCCCChhhHHHHHHHHHHHHhhChHHHHHHHhcccHHHHHHHHhcCCcCCCCHHHHH
Q psy10257         48 LNSVGGIQVLFPLFSQLDLPCDSADKKDPHLCSKLLGFICELVESSQTVQQHIIQNRGFLAISYMLQKLSREHLTLEVLG  127 (166)
Q Consensus        48 l~~IGGi~VLfPLf~Qld~~~~~~~~~dp~~~~~lL~ll~~lL~~s~~nQeqm~~~~Gf~iIg~LLqkvsp~~Lt~~vL~  127 (166)
                      +.++||..++.=   .+       +..++++=..-...|....++||..|+++++..|+..+--.|.+..|.|--..+|-
T Consensus       120 l~~~ggl~~ll~---~l-------~~~~~~lR~~Aa~Vigt~~qNNP~~Qe~v~E~~~L~~Ll~~ls~~~~~~~r~kaL~  189 (342)
T KOG2160|consen  120 LISLGGLVPLLG---YL-------ENSDAELRELAARVIGTAVQNNPKSQEQVIELGALSKLLKILSSDDPNTVRTKALF  189 (342)
T ss_pred             HhhccCHHHHHH---Hh-------cCCcHHHHHHHHHHHHHHHhcCHHHHHHHHHcccHHHHHHHHccCCCchHHHHHHH
Confidence            455666554433   33       23445554555566777899999999999999999999999998888888788888


Q ss_pred             HHHHHHHH
Q psy10257        128 SFLRFTKH  135 (166)
Q Consensus       128 ~l~~L~~~  135 (166)
                      ++-.+++-
T Consensus       190 AissLIRn  197 (342)
T KOG2160|consen  190 AISSLIRN  197 (342)
T ss_pred             HHHHHHhc
Confidence            88777653

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	166
1xqr_A	296	HSPBP1 protein; armadillo repeat, superhelical twi	89.1

>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A*

Probab=89.10  E-value=1.2  Score=36.97  Aligned_cols=65  Identities=9%  Similarity=0.177  Sum_probs=50.3

Q ss_pred             chHHHHHhcCCccchhh-hhhccCCCCCCCCCCChhhHHHHHHHHHHHHhhChHHHHHHHhcccHHHHHHHHhcCC
Q psy10257         43 SIHSTLNSVGGIQVLFP-LFSQLDLPCDSADKKDPHLCSKLLGFICELVESSQTVQQHIIQNRGFLAISYMLQKLS  117 (166)
Q Consensus        43 sikd~l~~IGGi~VLfP-Lf~Qld~~~~~~~~~dp~~~~~lL~ll~~lL~~s~~nQeqm~~~~Gf~iIg~LLqkvs  117 (166)
                      +-...+..+||+..|.+ |+   .       ..++++...-...+.++.++++.+|+.++...|+..+-.+|+.-+
T Consensus        72 dna~~~~~~G~l~~Lv~~lL---~-------s~~~~vr~~Aa~~Lg~ia~~n~~~~~~vv~~g~l~~Ll~LL~~~~  137 (296)
T 1xqr_A           72 DNAADFCQLSGMHLLVGRYL---E-------AGAAGLRWRAAQLIGTCSQNVAAIQEQVLGLGALRKLLRLLDRDA  137 (296)
T ss_dssp             HHHHHHHHTTHHHHHHHTTT---T-------CSSHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHHCS
T ss_pred             hhHHHHHHcCCHHHHHHHHH---c-------CCCHHHHHHHHHHHHHHHhCCHHHHHHHHHCCCHHHHHHHHccCC
Confidence            44556777899876555 44   2       235677777788888899999999999999999999988998643

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	166
d1xqra1	264	Hsp70-binding protein 1 (HspBP1) {Human (Homo sapi	89.96
d1xqra1	264	Hsp70-binding protein 1 (HspBP1) {Human (Homo sapi	87.83
d1xm9a1	457	Plakophilin 1 {Human (Homo sapiens) [TaxId: 9606]}	87.17

>d1xqra1 a.118.1.21 (A:87-350) Hsp70-binding protein 1 (HspBP1) {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: ARM repeat
family: HspBP1 domain
domain: Hsp70-binding protein 1 (HspBP1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.96  E-value=0.28  Score=36.70  Aligned_cols=82  Identities=9%  Similarity=0.145  Sum_probs=57.6

Q ss_pred             echHHHHHhcCCccchhhhhhccCCCCCCCCCCChhhHHHHHHHHHHHHhhChHHHHHHHhcccHHHHHHHHhcCCcCCC
Q psy10257         42 HSIHSTLNSVGGIQVLFPLFSQLDLPCDSADKKDPHLCSKLLGFICELVESSQTVQQHIIQNRGFLAISYMLQKLSREHL  121 (166)
Q Consensus        42 ~sikd~l~~IGGi~VLfPLf~Qld~~~~~~~~~dp~~~~~lL~ll~~lL~~s~~nQeqm~~~~Gf~iIg~LLqkvsp~~L  121 (166)
                      .+-+..+..+||+..++..+-         +..++++-..-...+.++.++++.+|+.+....|+..+--+|.+.+....
T Consensus        48 ~d~a~~l~~~gg~~~ll~~ll---------~s~~~~vr~~A~~~L~~l~~~~~~~~~~~~~~~~i~~Lv~lL~~~~~~~v  118 (264)
T d1xqra1          48 MDNAADFCQLSGMHLLVGRYL---------EAGAAGLRWRAAQLIGTCSQNVAAIQEQVLGLGALRKLLRLLDRDACDTV  118 (264)
T ss_dssp             HHHHHHHHHTTHHHHHHHTTT---------TCSSHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHHCSCHHH
T ss_pred             HHHHHHHHHcCCHHHHHHHHh---------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHhhcCCCHHH
Confidence            355677889999887754221         23467788888888999999999999999999998888888876543322


Q ss_pred             CHHHHHHHHHH
Q psy10257        122 TLEVLGSFLRF  132 (166)
Q Consensus       122 t~~vL~~l~~L  132 (166)
                      -...+.++..+
T Consensus       119 ~~~a~~aL~~l  129 (264)
T d1xqra1         119 RVKALFAISCL  129 (264)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHH
Confidence            23333344333

>d1xqra1 a.118.1.21 (A:87-350) Hsp70-binding protein 1 (HspBP1) {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: ARM repeat
family: HspBP1 domain
domain: Hsp70-binding protein 1 (HspBP1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.83  E-value=0.59  Score=34.79  Aligned_cols=79  Identities=13%  Similarity=0.098  Sum_probs=61.6

Q ss_pred             hHHHHHhcCCccchhhhhhccCCCCCCCCCCChhhHHHHHHHHHHHHhhChHHHHHHHhcccHHHHHHHHhcCCcCCCCH
Q psy10257         44 IHSTLNSVGGIQVLFPLFSQLDLPCDSADKKDPHLCSKLLGFICELVESSQTVQQHIIQNRGFLAISYMLQKLSREHLTL  123 (166)
Q Consensus        44 ikd~l~~IGGi~VLfPLf~Qld~~~~~~~~~dp~~~~~lL~ll~~lL~~s~~nQeqm~~~~Gf~iIg~LLqkvsp~~Lt~  123 (166)
                      -+..+..-||+++|.+++..          .++++.......+.+++.+++.+++.+....++..+--+|+.-+ ..+-.
T Consensus       136 ~~~~~~~~~gi~~L~~lL~~----------~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~v~~L~~lL~~~~-~~~~~  204 (264)
T d1xqra1         136 GLLQFLRLDGFSVLMRAMQQ----------QVQKLKVKSAFLLQNLLVGHPEHKGTLCSMGMVQQLVALVRTEH-SPFHE  204 (264)
T ss_dssp             HHHHHHHTTHHHHHHHHHHS----------SCHHHHHHHHHHHHHHHHHCGGGHHHHHHTTHHHHHHHHHTSCC-STHHH
T ss_pred             hHHHHHHhhhhhHHHHHHhc----------CchHHHHHHHHHHHHHHhccHHHHHHHHHhhhHHHHHHHHcCCC-HHHHH
Confidence            45677889999999988842          34667777888999999999999999999999999999996544 33455


Q ss_pred             HHHHHHHHHH
Q psy10257        124 EVLGSFLRFT  133 (166)
Q Consensus       124 ~vL~~l~~L~  133 (166)
                      .++.++..|+
T Consensus       205 ~a~~aL~~L~  214 (264)
T d1xqra1         205 HVLGALCSLV  214 (264)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            5666666665

>d1xm9a1 a.118.1.24 (A:244-700) Plakophilin 1 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: ARM repeat
family: Plakophilin 1 helical region
domain: Plakophilin 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.17  E-value=0.56  Score=34.87  Aligned_cols=82  Identities=18%  Similarity=0.228  Sum_probs=60.7

Q ss_pred             eechHHHHHhcCCccchhhhhhccCCCCCCCCCCChhhHHHHHHHHHHHHhhChHHHHHHHhcccHHHHHHHHhcCCcCC
Q psy10257         41 THSIHSTLNSVGGIQVLFPLFSQLDLPCDSADKKDPHLCSKLLGFICELVESSQTVQQHIIQNRGFLAISYMLQKLSREH  120 (166)
Q Consensus        41 t~sikd~l~~IGGi~VLfPLf~Qld~~~~~~~~~dp~~~~~lL~ll~~lL~~s~~nQeqm~~~~Gf~iIg~LLqkvsp~~  120 (166)
                      +...+..+...|||..|.-|+.          ..++++-..-...+.++..+++.+|+.+.+..|...+-.++.+..   
T Consensus        33 ~~~~~~~i~~~g~i~~Lv~lL~----------~~~~~v~~~a~~aL~~L~~~~~~~~~~i~~~g~v~~li~~l~~~~---   99 (457)
T d1xm9a1          33 DESAKQQVYQLGGICKLVDLLR----------SPNQNVQQAAAGALRNLVFRSTTNKLETRRQNGIREAVSLLRRTG---   99 (457)
T ss_dssp             CSSHHHHHHHTTHHHHHHHHTT----------SSCHHHHHHHHHHHHHHHSSCHHHHHHHHHTTCHHHHHHHHTTCC---
T ss_pred             CHHHHHHHHHCCcHHHHHHHHC----------CCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCChHHHHHHHhccC---
Confidence            4578999999999998887763          245667677778888888999999999999999988877776543   


Q ss_pred             CCHHHHHHHHHHHHHH
Q psy10257        121 LTLEVLGSFLRFTKHL  136 (166)
Q Consensus       121 Lt~~vL~~l~~L~~~l  136 (166)
                       +.++.......+..+
T Consensus       100 -~~~~~~~a~~~l~~l  114 (457)
T d1xm9a1         100 -NAEIQKQLTGLLWNL  114 (457)
T ss_dssp             -CHHHHHHHHHHHHHH
T ss_pred             -cHHHHHHHHHHHHHH
Confidence             344444444444444