Psyllid ID: psy1026


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------
MEETKVIYHIDDEETPYLVKLPVSPDKVTLADFKNVLNRPNFKFFFKSMDDDFGVVKEEIIEDDAHLPCFNGRVVSWQYNVPKEETPASSKTQTSRLVPYFFLLFHH
cccEEEEEEEccccccEEEEEccccccccHHHHHHHHcccccEEEEEcccccccccEEEEEcccccccccccEEEEEEEEcccccccccccccccccccEEEEEEcc
cccEEEEEEEccccccEEEEEccccccEEHHHHHHHHcccccEEEEEccccccccEEEEEccccccccccccEEEEEEEEcccccccccccccccccccEEEEEEcc
MEETKVIyhiddeetpylvklpvspdkvtladfknvlnrpnfKFFFKsmdddfgvvkeeiieddahlpcfngrvvswqynvpkeetpassktqtsrlvPYFFLLFHH
meetkviyhiddeetpylvKLPVSPDKVTLADFKNVLNRPNFKFFFKSMDDDFGVVKEEIIeddahlpcfNGRVVSWQYNVPKeetpassktqtsrLVPYFFLLFHH
MEETKVIYHIDDEETPYLVKLPVSPDKVTLADFKNVLNRPNfkfffksmdddfGVVKEEIIEDDAHLPCFNGRVVSWQYNVPKEETPASSKTQTSRLVPYFFLLFHH
*****VIYHIDDEETPYLVKLPVSPDKVTLADFKNVLNRPNFKFFFKSMDDDFGVVKEEIIEDDAHLPCFNGRVVSWQYNV**************RLVPYFFLLF**
**ETKVIYHIDDEETPYLVKLPVSPDKVTLADFKNVLNRPNFKFFFKSMDDDFGVVKEEIIEDDAHLPCFNGRVVSWQ*********************YFFLLFHH
MEETKVIYHIDDEETPYLVKLPVSPDKVTLADFKNVLNRPNFKFFFKSMDDDFGVVKEEIIEDDAHLPCFNGRVVSWQYNVPK**********TSRLVPYFFLLFHH
*EETKVIYHIDDEETPYLVKLPVSPDKVTLADFKNVLNRPNFKFFFKSMDDDFGVVKEEIIEDDAHLPCFNGRVVSWQYNVP************SRLVPYFFLLFHH
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MEETKVIYHIDDEETPYLVKLPVSPDKVTLADFKNVLNRPNFKFFFKSMDDDFGVVKEEIIEDDAHLPCFNGRVVSWQYNVPKEETPASSKTQTSRLVPYFFLLFHH
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query107 2.2.26 [Sep-21-2011]
B1WAP7 713 Segment polarity protein yes N/A 0.841 0.126 0.711 1e-32
Q6DKE2 717 Segment polarity protein N/A N/A 0.841 0.125 0.7 3e-32
P51141 695 Segment polarity protein yes N/A 0.719 0.110 0.787 7e-32
Q9WVB9 695 Segment polarity protein yes N/A 0.719 0.110 0.787 8e-32
O14640 695 Segment polarity protein yes N/A 0.719 0.110 0.787 1e-31
Q5IS48 670 Segment polarity protein yes N/A 0.719 0.114 0.787 1e-31
P54792 670 Putative Segment polarity yes N/A 0.887 0.141 0.683 2e-31
Q61062 716 Segment polarity protein no N/A 0.719 0.107 0.766 1e-30
Q92997 716 Segment polarity protein no N/A 0.719 0.107 0.766 2e-30
Q60838 736 Segment polarity protein no N/A 0.897 0.130 0.606 1e-28
>sp|B1WAP7|DVL3_XENTR Segment polarity protein dishevelled homolog DVL-3 OS=Xenopus tropicalis GN=dvl3 PE=2 SV=1 Back     alignment and function desciption
 Score =  138 bits (347), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 64/90 (71%), Positives = 75/90 (83%)

Query: 1  MEETKVIYHIDDEETPYLVKLPVSPDKVTLADFKNVLNRPNFKFFFKSMDDDFGVVKEEI 60
          M ETKVIYH+D++ETPYLVKLPV  +KVTL DFKNVLN+PN+KFFFKSMDDDFGVVKEEI
Sbjct: 1  MGETKVIYHLDEQETPYLVKLPVPAEKVTLGDFKNVLNKPNYKFFFKSMDDDFGVVKEEI 60

Query: 61 IEDDAHLPCFNGRVVSWQYNVPKEETPASS 90
           +D+A LPCFNGRVV W  +    ++ A S
Sbjct: 61 SDDNAKLPCFNGRVVCWLVSADGSQSDAGS 90




May play a role in the signal transduction pathway mediated by multiple Wnt genes (By similarity). Required in ciliogenesis for the docking of basal bodies to the apical plasma membrane.
Xenopus tropicalis (taxid: 8364)
>sp|Q6DKE2|DVL3_XENLA Segment polarity protein dishevelled homolog DVL-3 OS=Xenopus laevis GN=dvl3 PE=2 SV=1 Back     alignment and function description
>sp|P51141|DVL1_MOUSE Segment polarity protein dishevelled homolog DVL-1 OS=Mus musculus GN=Dvl1 PE=1 SV=2 Back     alignment and function description
>sp|Q9WVB9|DVL1_RAT Segment polarity protein dishevelled homolog DVL-1 OS=Rattus norvegicus GN=Dvl1 PE=1 SV=3 Back     alignment and function description
>sp|O14640|DVL1_HUMAN Segment polarity protein dishevelled homolog DVL-1 OS=Homo sapiens GN=DVL1 PE=1 SV=2 Back     alignment and function description
>sp|Q5IS48|DVL1_PANTR Segment polarity protein dishevelled homolog DVL-1 OS=Pan troglodytes GN=DVL1 PE=2 SV=1 Back     alignment and function description
>sp|P54792|DVL1L_HUMAN Putative Segment polarity protein dishevelled homolog DVL-1-like OS=Homo sapiens GN=DVL1L1 PE=5 SV=1 Back     alignment and function description
>sp|Q61062|DVL3_MOUSE Segment polarity protein dishevelled homolog DVL-3 OS=Mus musculus GN=Dvl3 PE=1 SV=2 Back     alignment and function description
>sp|Q92997|DVL3_HUMAN Segment polarity protein dishevelled homolog DVL-3 OS=Homo sapiens GN=DVL3 PE=1 SV=2 Back     alignment and function description
>sp|Q60838|DVL2_MOUSE Segment polarity protein dishevelled homolog DVL-2 OS=Mus musculus GN=Dvl2 PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query107
427793649 627 Hypothetical protein, partial [Rhipiceph 0.719 0.122 0.896 1e-36
91085413 611 PREDICTED: similar to dishevelled [Tribo 0.719 0.126 0.896 2e-36
328722899 618 PREDICTED: segment polarity protein dish 0.719 0.124 0.896 5e-36
328722897 622 PREDICTED: segment polarity protein dish 0.719 0.123 0.896 6e-36
328722895 658 PREDICTED: segment polarity protein dish 0.719 0.117 0.896 6e-36
340723342 641 PREDICTED: segment polarity protein dish 0.719 0.120 0.883 6e-36
321468304 594 dishevelled-like protein [Daphnia pulex] 0.869 0.156 0.747 7e-36
340723338 690 PREDICTED: segment polarity protein dish 0.719 0.111 0.883 7e-36
328722901 647 PREDICTED: segment polarity protein dish 0.719 0.119 0.896 7e-36
345482425 691 PREDICTED: segment polarity protein dish 0.925 0.143 0.71 8e-36
>gi|427793649|gb|JAA62276.1| Hypothetical protein, partial [Rhipicephalus pulchellus] Back     alignment and taxonomy information
 Score =  156 bits (395), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 69/77 (89%), Positives = 74/77 (96%)

Query: 1   MEETKVIYHIDDEETPYLVKLPVSPDKVTLADFKNVLNRPNFKFFFKSMDDDFGVVKEEI 60
           MEETK+IYHIDDEETPYLVK+PV P++VTLADFKNVLNRPNFKFFFKSMDDDFGVVKEEI
Sbjct: 25  MEETKIIYHIDDEETPYLVKVPVPPERVTLADFKNVLNRPNFKFFFKSMDDDFGVVKEEI 84

Query: 61  IEDDAHLPCFNGRVVSW 77
           +EDD  LPCFNGRVVSW
Sbjct: 85  VEDDCRLPCFNGRVVSW 101




Source: Rhipicephalus pulchellus

Species: Rhipicephalus pulchellus

Genus: Rhipicephalus

Family: Ixodidae

Order: Ixodida

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91085413|ref|XP_967594.1| PREDICTED: similar to dishevelled [Tribolium castaneum] gi|270008403|gb|EFA04851.1| hypothetical protein TcasGA2_TC014903 [Tribolium castaneum] Back     alignment and taxonomy information
>gi|328722899|ref|XP_003247704.1| PREDICTED: segment polarity protein dishevelled homolog DVL-3-like isoform 4 [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|328722897|ref|XP_003247703.1| PREDICTED: segment polarity protein dishevelled homolog DVL-3-like isoform 3 [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|328722895|ref|XP_003247702.1| PREDICTED: segment polarity protein dishevelled homolog DVL-3-like isoform 2 [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|340723342|ref|XP_003400049.1| PREDICTED: segment polarity protein dishevelled homolog DVL-3-like isoform 3 [Bombus terrestris] Back     alignment and taxonomy information
>gi|321468304|gb|EFX79289.1| dishevelled-like protein [Daphnia pulex] Back     alignment and taxonomy information
>gi|340723338|ref|XP_003400047.1| PREDICTED: segment polarity protein dishevelled homolog DVL-3-like isoform 1 [Bombus terrestris] gi|350401331|ref|XP_003486120.1| PREDICTED: segment polarity protein dishevelled homolog DVL-3-like [Bombus impatiens] Back     alignment and taxonomy information
>gi|328722901|ref|XP_001952042.2| PREDICTED: segment polarity protein dishevelled homolog DVL-3-like isoform 1 [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|345482425|ref|XP_001608119.2| PREDICTED: segment polarity protein dishevelled homolog DVL-3 isoform 1 [Nasonia vitripennis] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query107
ZFIN|ZDB-GENE-041118-20 747 dvl2 "dishevelled, dsh homolog 0.897 0.128 0.545 7.7e-23
UNIPROTKB|B1WAP7 713 dvl3 "Segment polarity protein 0.841 0.126 0.588 8.9e-23
UNIPROTKB|Q6DKE2 717 dvl3 "Segment polarity protein 0.841 0.125 0.577 1.2e-22
ZFIN|ZDB-GENE-110411-131120 si:ch73-236e11.2 "si:ch73-236e 0.719 0.641 0.675 1.3e-22
UNIPROTKB|P54792 670 DVL1L1 "Putative Segment polar 0.850 0.135 0.595 4.4e-22
UNIPROTKB|Q5IS48 670 DVL1 "Segment polarity protein 0.719 0.114 0.662 9.4e-22
UNIPROTKB|O14640 695 DVL1 "Segment polarity protein 0.719 0.110 0.662 1e-21
MGI|MGI:94941 695 Dvl1 "dishevelled, dsh homolog 0.719 0.110 0.662 1e-21
RGD|620632 695 Dvl1 "dishevelled, dsh homolog 0.719 0.110 0.662 1e-21
UNIPROTKB|F1N6M9 572 DVL1 "Uncharacterized protein" 0.719 0.134 0.662 1.1e-21
ZFIN|ZDB-GENE-041118-20 dvl2 "dishevelled, dsh homolog 2 (Drosophila)" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
 Score = 274 (101.5 bits), Expect = 7.7e-23, P = 7.7e-23
 Identities = 54/99 (54%), Positives = 66/99 (66%)

Query:     1 MEETKVIYHIDDEETPYLVKLPVSPDKVTLADFKNVLNRPNXXXXXXXXXXXXGVVKEEI 60
             M ETK+IYHID+EETPYLVK+P++ +K+TL DFK VLN+PN            GVVKEEI
Sbjct:     1 MAETKIIYHIDEEETPYLVKIPIAAEKITLLDFKQVLNKPNYKFFFKSMDQDFGVVKEEI 60

Query:    61 IEDDAHLPCFNGRVVSWQYNVPKEETPASSKTQTSRLVP 99
              +D A LPCFNGRVVSW   +   +TPA+        VP
Sbjct:    61 SDDSAKLPCFNGRVVSW---LVSSDTPAAEPVAPPVEVP 96




GO:0004871 "signal transducer activity" evidence=IEA
GO:0007275 "multicellular organismal development" evidence=IEA
GO:0005622 "intracellular" evidence=IEA
GO:0035556 "intracellular signal transduction" evidence=IEA
GO:0060028 "convergent extension involved in axis elongation" evidence=IGI
GO:0046328 "regulation of JNK cascade" evidence=IBA
GO:0005109 "frizzled binding" evidence=IBA
GO:0090179 "planar cell polarity pathway involved in neural tube closure" evidence=IBA
GO:0030136 "clathrin-coated vesicle" evidence=IBA
GO:0005886 "plasma membrane" evidence=IBA
GO:0003007 "heart morphogenesis" evidence=IBA
GO:0045177 "apical part of cell" evidence=IBA
GO:0060070 "canonical Wnt receptor signaling pathway" evidence=IBA
GO:0090103 "cochlea morphogenesis" evidence=IBA
GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IBA
GO:0005515 "protein binding" evidence=IPI
GO:0021535 "cell migration in hindbrain" evidence=IMP
GO:0005819 "spindle" evidence=IDA
GO:0005938 "cell cortex" evidence=IDA
GO:0036342 "post-anal tail morphogenesis" evidence=IGI
UNIPROTKB|B1WAP7 dvl3 "Segment polarity protein dishevelled homolog DVL-3" [Xenopus (Silurana) tropicalis (taxid:8364)] Back     alignment and assigned GO terms
UNIPROTKB|Q6DKE2 dvl3 "Segment polarity protein dishevelled homolog DVL-3" [Xenopus laevis (taxid:8355)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-110411-131 si:ch73-236e11.2 "si:ch73-236e11.2" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|P54792 DVL1L1 "Putative Segment polarity protein dishevelled homolog DVL-1-like" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|Q5IS48 DVL1 "Segment polarity protein dishevelled homolog DVL-1" [Pan troglodytes (taxid:9598)] Back     alignment and assigned GO terms
UNIPROTKB|O14640 DVL1 "Segment polarity protein dishevelled homolog DVL-1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
MGI|MGI:94941 Dvl1 "dishevelled, dsh homolog 1 (Drosophila)" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|620632 Dvl1 "dishevelled, dsh homolog 1 (Drosophila)" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|F1N6M9 DVL1 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P51141DVL1_MOUSENo assigned EC number0.78750.71960.1107yesN/A
P51140DSH_DROMENo assigned EC number0.71790.71020.1219yesN/A
B1WAP7DVL3_XENTRNo assigned EC number0.71110.84110.1262yesN/A
Q5IS48DVL1_PANTRNo assigned EC number0.78750.71960.1149yesN/A
P54792DVL1L_HUMANNo assigned EC number0.68360.88780.1417yesN/A
Q9WVB9DVL1_RATNo assigned EC number0.78750.71960.1107yesN/A
O14640DVL1_HUMANNo assigned EC number0.78750.71960.1107yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query107
smart0002183 smart00021, DAX, Domain present in Dishevelled and 2e-39
pfam0077881 pfam00778, DIX, DIX domain 7e-36
>gnl|CDD|197474 smart00021, DAX, Domain present in Dishevelled and axin Back     alignment and domain information
 Score =  125 bits (317), Expect = 2e-39
 Identities = 57/78 (73%), Positives = 66/78 (84%), Gaps = 1/78 (1%)

Query: 1  MEETKVIYHIDDEETPYLVKLPVSPDKVTLADFKNVLNRPNFKFFFKSMDDDF-GVVKEE 59
            ETKVIYH+DDEETPYLVK+PV  ++VTL DFK VL + N+K++FKSMDDDF GVVKEE
Sbjct: 1  CSETKVIYHLDDEETPYLVKVPVPAERVTLGDFKEVLTKKNYKYYFKSMDDDFGGVVKEE 60

Query: 60 IIEDDAHLPCFNGRVVSW 77
          I +D A LPCFNGRVVSW
Sbjct: 61 IRDDSARLPCFNGRVVSW 78


Domain of unknown function. Length = 83

>gnl|CDD|189714 pfam00778, DIX, DIX domain Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 107
smart0002183 DAX Domain present in Dishevelled and axin. Domain 100.0
PF0077884 DIX: DIX domain; InterPro: IPR001158 Dishevelled ( 100.0
KOG3571|consensus 626 100.0
PF06136 337 DUF966: Domain of unknown function (DUF966); Inter 96.35
PF0878374 DWNN: DWNN domain; InterPro: IPR014891 The ~75-res 84.06
>smart00021 DAX Domain present in Dishevelled and axin Back     alignment and domain information
Probab=100.00  E-value=9.9e-46  Score=254.27  Aligned_cols=82  Identities=71%  Similarity=1.213  Sum_probs=80.4

Q ss_pred             CcceEEEEEeCCCCCeeeEeccCCCCccChHHHhhhhcCCCceeeeeecCCCC-CceeEeeccCCccccccCCeEEEEEe
Q psy1026           1 MEETKVIYHIDDEETPYLVKLPVSPDKVTLADFKNVLNRPNFKFFFKSMDDDF-GVVKEEIIEDDAHLPCFNGRVVSWQY   79 (107)
Q Consensus         1 ~~~TkV~Y~~dde~tPY~~~Ip~~~~~iTL~dFK~~l~kgnYryfFK~~d~df-gvVkEEI~dD~~~LP~~eGkIv~wl~   79 (107)
                      |++|||+||+|||+|||+++||+|+++|||||||++|+|+|||||||++|||| |+|||||+||+++||+|||||||||+
T Consensus         1 ~~~TkV~Y~~d~e~~PY~~~i~~~~~~iTLgdFK~~l~k~~yry~FK~~d~df~gvVkeEi~dD~~~LP~~eGkiv~~v~   80 (83)
T smart00021        1 CSETKVIYHLDDEETPYLVKVPVPAERVTLGDFKEVLTKKNYKYYFKSMDDDFGGVVKEEIRDDSARLPCFNGRVVSWLV   80 (83)
T ss_pred             CCceEEEEEeCCCCCceeEecCCCcCceEHHHHHHhhccCCcEEEEEecCcccCCeeEEEEcCCcccccccCCEEEEEEE
Confidence            78999999999999999999999999999999999999999999999999999 99999999999999999999999999


Q ss_pred             cCC
Q psy1026          80 NVP   82 (107)
Q Consensus        80 ~~~   82 (107)
                      +++
T Consensus        81 ~~d   83 (83)
T smart00021       81 SVE   83 (83)
T ss_pred             ecC
Confidence            875



Domain of unknown function.

>PF00778 DIX: DIX domain; InterPro: IPR001158 Dishevelled (Dsh) protein is an important component of the Wnt signal-transduction pathway Back     alignment and domain information
>KOG3571|consensus Back     alignment and domain information
>PF06136 DUF966: Domain of unknown function (DUF966); InterPro: IPR010369 This is a family of plant proteins confined to monocotyledons and mosses, with unknown function Back     alignment and domain information
>PF08783 DWNN: DWNN domain; InterPro: IPR014891 The ~75-residue DWNN (Domain With No Name) domain is highly conserved through eukaryotic species but is absent in prokaryotes Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query107
3pz8_A106 Crystal Structure Of Dvl1-Dix(Y17d) Mutant Length = 2e-21
3pz7_A91 Crystal Structure Of Ccd1-Dix Domain Length = 91 1e-08
>pdb|3PZ8|A Chain A, Crystal Structure Of Dvl1-Dix(Y17d) Mutant Length = 106 Back     alignment and structure

Iteration: 1

Score = 97.1 bits (240), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 53/96 (55%), Positives = 64/96 (66%), Gaps = 3/96 (3%) Query: 3 ETKVIYHIDDEETPYLVKLPVSPDKVTLADFKNVL-NRP--NXXXXXXXXXXXXGVVKEE 59 +TK+IYH+D+EETP LVKLPV+P++VTLADFKNVL NRP GVVKEE Sbjct: 5 DTKIIYHMDEEETPDLVKLPVAPERVTLADFKNVLSNRPVHAYKFFFKSMDQDFGVVKEE 64 Query: 60 IIEDDAHLPCFNGRVVSWQYNVPKEETPASSKTQTS 95 I +D+A LPCFNGRVVSW + A S+ S Sbjct: 65 IFDDNAKLPCFNGRVVSWLVLAEGAHSDAGSQGTDS 100
>pdb|3PZ7|A Chain A, Crystal Structure Of Ccd1-Dix Domain Length = 91 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query107
3pz7_A91 Dixin; DIX domain, oligomerization, signaling prot 5e-33
3pz8_A106 Segment polarity protein dishevelled homolog DVL-; 7e-33
1wsp_A84 Axin 1 protein; signaling protein; 2.90A {Rattus n 8e-28
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-04
>3pz7_A Dixin; DIX domain, oligomerization, signaling protein; 2.44A {Homo sapiens} Length = 91 Back     alignment and structure
 Score =  109 bits (273), Expect = 5e-33
 Identities = 34/77 (44%), Positives = 51/77 (66%), Gaps = 1/77 (1%)

Query: 2  EETKVIYHIDDEETPYLVKLPVSPDKVTLADFKNVLNRP-NFKFFFKSMDDDFGVVKEEI 60
            TKV+Y  D   TP++V +P   ++VTL DFK  ++R  N ++ FK+MD +FG VKEEI
Sbjct: 7  TCTKVLYFTDRSLTPFMVNIPKRLEEVTLKDFKAAIDREGNHRYHFKAMDPEFGTVKEEI 66

Query: 61 IEDDAHLPCFNGRVVSW 77
            DD  +P + G++V+W
Sbjct: 67 FHDDDAIPGWEGKIVAW 83


>3pz8_A Segment polarity protein dishevelled homolog DVL-; DIX domain, oligomerization, signaling protein; 2.87A {Mus musculus} Length = 106 Back     alignment and structure
>1wsp_A Axin 1 protein; signaling protein; 2.90A {Rattus norvegicus} SCOP: d.15.1.8 PDB: 2d5g_A Length = 84 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query107
3pz8_A106 Segment polarity protein dishevelled homolog DVL-; 100.0
3pz7_A91 Dixin; DIX domain, oligomerization, signaling prot 100.0
1wsp_A84 Axin 1 protein; signaling protein; 2.90A {Rattus n 100.0
2c7h_A86 RBBP6, retinoblastoma-binding protein 6, isoform 3 91.17
>3pz8_A Segment polarity protein dishevelled homolog DVL-; DIX domain, oligomerization, signaling protein; 2.87A {Mus musculus} Back     alignment and structure
Probab=100.00  E-value=1.6e-49  Score=282.27  Aligned_cols=97  Identities=63%  Similarity=1.044  Sum_probs=77.6

Q ss_pred             CcceEEEEEeCCCCCeeeEeccCCCCccChHHHhhhhcC-C--CceeeeeecCCCCCceeEeeccCCccccccCCeEEEE
Q psy1026           1 MEETKVIYHIDDEETPYLVKLPVSPDKVTLADFKNVLNR-P--NFKFFFKSMDDDFGVVKEEIIEDDAHLPCFNGRVVSW   77 (107)
Q Consensus         1 ~~~TkV~Y~~dde~tPY~~~Ip~~~~~iTL~dFK~~l~k-g--nYryfFK~~d~dfgvVkEEI~dD~~~LP~~eGkIv~w   77 (107)
                      +++|||+||+|||+||||++||+++++|||||||++|+| |  |||||||++|+|||+|||||+||+++|||||||||||
T Consensus         3 ~~~TkV~Y~~ddE~tPY~~~Ip~~~~~iTL~dFK~~l~kr~~~nYryfFK~~d~dfgvVkeEI~dD~~~LP~~eGkIv~w   82 (106)
T 3pz8_A            3 HMDTKIIYHMDEEETPDLVKLPVAPERVTLADFKNVLSNRPVHAYKFFFKSMDQDFGVVKEEIFDDNAKLPCFNGRVVSW   82 (106)
T ss_dssp             --CEEEEEECTTCSSCEEEEESSCSSSCBHHHHHHTCTTSCGGGBCCEEEEEETTTEEEEEECCCTTCBCCCBTTBEEEE
T ss_pred             CCceEEEEECCCCCCceEEEccCCcccccHHHHHHHHhcCCCccceEEEeecCcccCeeeeEecCCcccccccCCEEEEE
Confidence            468999999999999999999999999999999999965 7  9999999999999999999999999999999999999


Q ss_pred             EecCCCCCCCCCCcccccce
Q psy1026          78 QYNVPKEETPASSKTQTSRL   97 (107)
Q Consensus        78 l~~~~g~~~~~~~~~~~~~~   97 (107)
                      |++++||+++.+|++++++-
T Consensus        83 lv~~e~s~sd~~~~~~~~~~  102 (106)
T 3pz8_A           83 LVLAEGAHSDAGSQGTDSHT  102 (106)
T ss_dssp             CCBC----------------
T ss_pred             EEecCCcCCCCCCcCCCCCC
Confidence            99999998888888887764



>3pz7_A Dixin; DIX domain, oligomerization, signaling protein; 2.44A {Homo sapiens} Back     alignment and structure
>1wsp_A Axin 1 protein; signaling protein; 2.90A {Rattus norvegicus} SCOP: d.15.1.8 PDB: 2d5g_A Back     alignment and structure
>2c7h_A RBBP6, retinoblastoma-binding protein 6, isoform 3; P53-associated, mRNA processing, splicing-associated, oesophageal cancer; NMR {Homo sapiens} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 107
d1wspa183 d.15.1.8 (A:750-832) Axin 1 {Rat (Rattus norvegicu 4e-30
>d1wspa1 d.15.1.8 (A:750-832) Axin 1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 83 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: beta-Grasp (ubiquitin-like)
superfamily: Ubiquitin-like
family: DIX domain
domain: Axin 1
species: Rat (Rattus norvegicus) [TaxId: 10116]
 Score =  100 bits (251), Expect = 4e-30
 Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 5/79 (6%)

Query: 2  EETKVIYHIDDEETPYLVKLPVSPDKVTLADFKNVLNRP-NFKFFFKSMDDDF--GVVKE 58
          +   V Y+   E  PY   +      VTL  FK +L +  +++++FK + D+F  GVV E
Sbjct: 2  DSIVVAYYFCGEPIPYRTLVR--GRAVTLGQFKELLTKKGSYRYYFKKVSDEFDCGVVFE 59

Query: 59 EIIEDDAHLPCFNGRVVSW 77
          E+ ED+A LP F  +++  
Sbjct: 60 EVREDEAILPVFEEKIIGK 78


Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query107
d1wspa183 Axin 1 {Rat (Rattus norvegicus) [TaxId: 10116]} 100.0
>d1wspa1 d.15.1.8 (A:750-832) Axin 1 {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: beta-Grasp (ubiquitin-like)
superfamily: Ubiquitin-like
family: DIX domain
domain: Axin 1
species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00  E-value=8.3e-41  Score=226.79  Aligned_cols=80  Identities=34%  Similarity=0.611  Sum_probs=76.4

Q ss_pred             CcceEEEEEeCCCCCeeeEeccCCCCccChHHHhhhhcC-CCceeeeeecCCCC--CceeEeeccCCccccccCCeEEEE
Q psy1026           1 MEETKVIYHIDDEETPYLVKLPVSPDKVTLADFKNVLNR-PNFKFFFKSMDDDF--GVVKEEIIEDDAHLPCFNGRVVSW   77 (107)
Q Consensus         1 ~~~TkV~Y~~dde~tPY~~~Ip~~~~~iTL~dFK~~l~k-gnYryfFK~~d~df--gvVkEEI~dD~~~LP~~eGkIv~w   77 (107)
                      |++|+|+||+|+|++||+++||  ++.|||||||++|+| ||||||||++|+||  |+|||||+||+++||+|||||+||
T Consensus         1 ~~~~~v~Y~~~~e~~Py~~~ip--~~~iTL~dFK~~~~~~G~y~f~FK~~~~d~~~~~V~~ei~dD~~~LP~~egkIvak   78 (83)
T d1wspa1           1 CDSIVVAYYFCGEPIPYRTLVR--GRAVTLGQFKELLTKKGSYRYYFKKVSDEFDCGVVFEEVREDEAILPVFEEKIIGK   78 (83)
T ss_dssp             CCCEEEEEEETTCSSCEEEEET--TSCCBHHHHHHHCCSCSCEEEEEEEECTTSTTSEEEEEECCTTCBCCCBTTBEEEE
T ss_pred             CCceEEEEEeCCCCCceEEecc--CCcccHHHHHHhcCCCCcEEEEEEecCcccCCCeEEEEECCCCccCcccCCEEEEE
Confidence            7899999999999999999876  689999999999999 89999999999999  899999999999999999999999


Q ss_pred             EecCC
Q psy1026          78 QYNVP   82 (107)
Q Consensus        78 l~~~~   82 (107)
                      +++.+
T Consensus        79 v~~id   83 (83)
T d1wspa1          79 VEKVD   83 (83)
T ss_dssp             EEECC
T ss_pred             EEecC
Confidence            99875