Psyllid ID: psy10617


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------28
LLNNIVVRVHGLDINGSRQCRIWTNVLHTTDGVIIVRYKLYEVCYSFNIVIISKEDQTHVYRQCYGQHTGFKMFMDNLLLSLTRKVHLPDLEFWSNLGDWPLAKSAQYPMFSWCGSNETFDIIMPTYDITESSLENMGRVSLDMLSVQGNNHKKWEQKEPKVFWRGRDSNRDRLKLIDIARQHPDLFNASLTNFFFFKSEEEKYGPKTKHVSFFEFFDVKEDLSDLVERVRWAQDNEDLVVVMVRNAQILAREKLMPQDILCYHAVLFNFNFMGSKNVL
cHHHHHHHHHccccccccccEEEEEcEEccccHHHHHHHHccccEEEEEEEEccEEEEEEEccccccccHHHHHHHHHHHHHcccccccccEEEEEcccccccccccccEEEEccccccccEEEccccccccccccccccHHHHHHHcccccccccccccEEEEEcccccccHHHHHHHHccccccccccccccccccHHHHHHccccccccccccccccccHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHccccccc
ccccEEEEEEccccccccEEEEEEEEcccccEEEEEEEEEEEEEEEEEEEEEcccEEEEEEEEcccccccHHHHHHHHHHHHHcccccccEEEEEEcccccccccccccEEEEccccccccEEcccccccccccccccccccHHHHHHcccccccHccccEEEEEcccccHHHHHHHHHHHHcccHHcHHHccEEEEcccHHcccccccccccEccccccccHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHccc
LLNNIVVRVHgldingsrqcriwtnvlhttdGVIIVRYKLYEVCYSFNIVIiskedqthvyrqcygqhtgfKMFMDNLLLSLTrkvhlpdlefwsnlgdwplaksaqypmfswcgsnetfdiimptyditesslenmgRVSLDMLSvqgnnhkkweqkepkvfwrgrdsnrdrlKLIDIARQhpdlfnasltnffffkseeekygpktkhvsFFEFFDVKEDLSDLVERVRWAQDNEDLVVVMVRNAQILAREKLMPQDILCYHAVLFNfnfmgsknvl
LLNNIVVRVhgldingsrqcriwtnvlhttdGVIIVRYKLYEVCYSFNIVIISKEDQTHVYRQCYGQHTGFKMFMDNLLLSLTRKVHLPDLEFWSNLGDWPLAKSAQYPMFSWCGSNETFDIIMPTYDITESSLENMGRVSLDMLSVQgnnhkkweqkepkvfwrgrdsnrDRLKLIDIarqhpdlfnASLTNFFFFKSEEEKYGPKTKHVSFFEFFDVKEDLSDLVERVrwaqdnedlvVVMVRNAQILAREKLMPQDILCYHAVLFNFNFMGSKNVL
LLNNIVVRVHGLDINGSRQCRIWTNVLHTTDGVIIVRYKLYEVCYSFNIVIISKEDQTHVYRQCYGQHTGFKMFMDNLLLSLTRKVHLPDLEFWSNLGDWPLAKSAQYPMFSWCGSNETFDIIMPTYDITESSLENMGRVSLDMLSVQGNNHKKWEQKEPKVFWRGRDSNRDRLKLIDIARQHPDLFNASLTNFFFFKSEEEKYGPKTKHVSFFEFFDVKEDLSDLVERVRWAQDNEDLVVVMVRNAQILAREKLMPQDILCYHAVLFNFNFMGSKNVL
***NIVVRVHGLDINGSRQCRIWTNVLHTTDGVIIVRYKLYEVCYSFNIVIISKEDQTHVYRQCYGQHTGFKMFMDNLLLSLTRKVHLPDLEFWSNLGDWPLAKSAQYPMFSWCGSNETFDIIMPTYDITESSLENMGRVSLDMLS**************KVFWRGRDSNRDRLKLIDIARQHPDLFNASLTNFFFFKSEEEKYGPKTKHVSFFEFFDVKEDLSDLVERVRWAQDNEDLVVVMVRNAQILAREKLMPQDILCYHAVLFNFNFM******
**NNIV*RVHGLDINGSRQCRIWTNVLHTTDGVIIVRYKLYEVCYSFNIVIISKEDQTHVYRQCYGQHTGFKMFMDNLLLSLTRKVHLPDLEFWSNLGDWPLAKSAQYPMFSWCGSNETFDIIMPTYDITESSLENMGRVSLDMLSVQGNNHKKWEQKEPKVFWRGRDSNRDRLKLIDIARQHPDLFNASLTNFFFFKSEEEKYGPKTKHVSFFEFFDVKEDLSDLVERVRWAQDNEDLVVVMVRNAQILAREKLMPQDILCYHAVLFNFNFMGSKNV*
LLNNIVVRVHGLDINGSRQCRIWTNVLHTTDGVIIVRYKLYEVCYSFNIVIISKEDQTHVYRQCYGQHTGFKMFMDNLLLSLTRKVHLPDLEFWSNLGDWPLAKSAQYPMFSWCGSNETFDIIMPTYDITESSLENMGRVSLDMLSVQGNNHKKWEQKEPKVFWRGRDSNRDRLKLIDIARQHPDLFNASLTNFFFFKSEEEKYGPKTKHVSFFEFFDVKEDLSDLVERVRWAQDNEDLVVVMVRNAQILAREKLMPQDILCYHAVLFNFNFMGSKNVL
LLNNIVVRVHGLDINGSRQCRIWTNVLHTTDGVIIVRYKLYEVCYSFNIVIISKEDQTHVYRQCYGQHTGFKMFMDNLLLSLTRKVHLPDLEFWSNLGDWPLAKSAQYPMFSWCGSNETFDIIMPTYDITESSLENMGRVSLDMLSVQGNNHKKWEQKEPKVFWRGRDSNRDRLKLIDIARQHPDLFNASLTNFFFFKSEEEKYGPKTKHVSFFEFFDVKEDLSDLVERVRWAQDNEDLVVVMVRNAQILAREKLMPQDILCYHAVLFNFNFMGSKNVL
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LLNNIVVRVHGLDINGSRQCRIWTNVLHTTDGVIIVRYKLYEVCYSFNIVIISKEDQTHVYRQCYGQHTGFKMFMDNLLLSLTRKVHLPDLEFWSNLGDWPLAKSAQYPMFSWCGSNETFDIIMPTYDITESSLENMGRVSLDMLSVQGNNHKKWEQKEPKVFWRGRDSNRDRLKLIDIARQHPDLFNASLTNFFFFKSEEEKYGPKTKHVSFFEFFDVKEDLSDLVERVRWAQDNEDLVVVMVRNAQILAREKLMPQDILCYHAVLFNFNFMGSKNVL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query279 2.2.26 [Sep-21-2011]
Q9JHP7502 KDEL motif-containing pro yes N/A 0.752 0.418 0.441 3e-60
Q6UW63502 KDEL motif-containing pro yes N/A 0.752 0.418 0.437 4e-60
Q7ZVE6500 KDEL motif-containing pro yes N/A 0.756 0.422 0.450 2e-59
Q7Z4H8507 KDEL motif-containing pro no N/A 0.734 0.404 0.379 5e-49
Q566E5508 KDEL motif-containing pro yes N/A 0.734 0.403 0.383 3e-48
B0X1Q4403 O-glucosyltransferase rum N/A N/A 0.379 0.263 0.302 1e-05
A0NDG6399 O-glucosyltransferase rum no N/A 0.401 0.280 0.268 2e-05
Q8NBL1392 Protein O-glucosyltransfe no N/A 0.623 0.443 0.230 5e-05
Q8BYB9392 Protein O-glucosyltransfe no N/A 0.623 0.443 0.230 0.0001
Q5E9Q1392 Protein O-glucosyltransfe no N/A 0.444 0.316 0.272 0.0002
>sp|Q9JHP7|KDEL1_MOUSE KDEL motif-containing protein 1 OS=Mus musculus GN=Kdelc1 PE=1 SV=1 Back     alignment and function desciption
 Score =  231 bits (590), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 116/263 (44%), Positives = 156/263 (59%), Gaps = 53/263 (20%)

Query: 60  VYRQCYGQHTGFKMFMDNLLLSLTRKVHLPDLEFWSNLGDWPLAK----SAQYPMFSWCG 115
           VY + +G+H GF++FMD +LLSLTRKV +PD+EF+ NLGDWPL K    S   P+FSWCG
Sbjct: 199 VYIKTHGEHVGFRIFMDAILLSLTRKVRMPDVEFFVNLGDWPLEKKKSNSNIQPIFSWCG 258

Query: 116 SNETFDIIMPTYDITESSLENMGRVSLDMLSVQGNNHKKWEQKEPKVFWRGRDSNRDRLK 175
           S E+ DI+MPTYD+T+S LE MGRVSLDM+SVQ N    WE K     WRGRDS ++RL+
Sbjct: 259 STESRDIVMPTYDLTDSVLETMGRVSLDMMSVQANTGPPWESKNSTAVWRGRDSRKERLE 318

Query: 176 LIDIARQHPDLFNASLTNFFFFKSEEEKYGPKTKHVSFFEFFD----------------- 218
           L+ ++R+HP+L +A+ TNFFFFK +E  YGP  KH+SFF+FF                  
Sbjct: 319 LVKLSRKHPELIDAAFTNFFFFKHDESLYGPIVKHISFFDFFKHKYQINIDGTVAAYRLP 378

Query: 219 --------------------------------VKEDLSDLVERVRWAQDNEDLVVVMVRN 246
                                           VK +LSDL+E+++WA++++     + + 
Sbjct: 379 YLLVGDSVVLKQDSIYYEHFYNELQPWKHYIPVKSNLSDLLEKLKWAKEHDAEAKKIAKA 438

Query: 247 AQILAREKLMPQDILCYHAVLFN 269
            Q  AR  LM  DI CY+  LF 
Sbjct: 439 GQEFARNNLMGDDIFCYYFKLFQ 461





Mus musculus (taxid: 10090)
>sp|Q6UW63|KDEL1_HUMAN KDEL motif-containing protein 1 OS=Homo sapiens GN=KDELC1 PE=1 SV=1 Back     alignment and function description
>sp|Q7ZVE6|KDEL1_DANRE KDEL motif-containing protein 1 OS=Danio rerio GN=kdelc1 PE=2 SV=1 Back     alignment and function description
>sp|Q7Z4H8|KDEL2_HUMAN KDEL motif-containing protein 2 OS=Homo sapiens GN=KDELC2 PE=1 SV=2 Back     alignment and function description
>sp|Q566E5|KDEL2_RAT KDEL motif-containing protein 2 OS=Rattus norvegicus GN=Kdelc2 PE=2 SV=1 Back     alignment and function description
>sp|B0X1Q4|RUMI_CULQU O-glucosyltransferase rumi homolog OS=Culex quinquefasciatus GN=CPIJ013394 PE=3 SV=1 Back     alignment and function description
>sp|A0NDG6|RUMI_ANOGA O-glucosyltransferase rumi homolog OS=Anopheles gambiae GN=AGAP004267 PE=3 SV=1 Back     alignment and function description
>sp|Q8NBL1|PGLT1_HUMAN Protein O-glucosyltransferase 1 OS=Homo sapiens GN=POGLUT1 PE=1 SV=1 Back     alignment and function description
>sp|Q8BYB9|PGLT1_MOUSE Protein O-glucosyltransferase 1 OS=Mus musculus GN=Poglut1 PE=2 SV=2 Back     alignment and function description
>sp|Q5E9Q1|PGLT1_BOVIN Protein O-glucosyltransferase 1 OS=Bos taurus GN=POGLUT1 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query279
345493843 507 PREDICTED: KDEL motif-containing protein 0.756 0.416 0.5 1e-70
91081993 498 PREDICTED: similar to AGAP008037-PA [Tri 0.784 0.439 0.487 8e-70
357622883 460 hypothetical protein KGM_01635 [Danaus p 0.763 0.463 0.496 2e-69
350402459 497 PREDICTED: KDEL motif-containing protein 0.752 0.422 0.498 5e-69
383856972 496 PREDICTED: KDEL motif-containing protein 0.749 0.421 0.511 1e-68
321474111 502 hypothetical protein DAPPUDRAFT_314403 [ 0.749 0.416 0.501 2e-68
380029849 497 PREDICTED: LOW QUALITY PROTEIN: KDEL mot 0.752 0.422 0.494 5e-68
110776820 497 PREDICTED: KDEL motif-containing protein 0.752 0.422 0.498 5e-68
332025008 495 KDEL motif-containing protein 1 [Acromyr 0.749 0.422 0.509 6e-68
340711779 497 PREDICTED: LOW QUALITY PROTEIN: KDEL mot 0.752 0.422 0.494 6e-68
>gi|345493843|ref|XP_003427163.1| PREDICTED: KDEL motif-containing protein 1-like [Nasonia vitripennis] Back     alignment and taxonomy information
 Score =  272 bits (695), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 131/262 (50%), Positives = 171/262 (65%), Gaps = 51/262 (19%)

Query: 59  HVYRQCYGQHTGFKMFMDNLLLSLTRKVHLPDLEFWSNLGDWPLAKSAQ--YPMFSWCGS 116
            +YR CYGQH GFK+F D +LLSL RK++LPD+EF+ NLGDWPL    +  +P+FSWCGS
Sbjct: 207 QIYRNCYGQHVGFKIFSDAILLSLARKINLPDVEFFMNLGDWPLVPKNKEIHPIFSWCGS 266

Query: 117 NETFDIIMPTYDITESSLENMGRVSLDMLSVQGNNHKKWEQKEPKVFWRGRDSNRDRLKL 176
           ++++DI++PTYDIT+SS+E MGRV LDMLSVQG+    W +K  K+FWRGRD+ R+RL L
Sbjct: 267 DDSYDIVLPTYDITQSSMEAMGRVMLDMLSVQGSTTDPWNKKIEKMFWRGRDARRERLDL 326

Query: 177 IDIARQHPDLFNASLTNFFFFKSEEEKYGPKTKHVSFFEFFD------------------ 218
           IDIAR+HP+LFNAS+TNFFFF+ E EKYGP+ KHVSFFEFF                   
Sbjct: 327 IDIARKHPELFNASITNFFFFRDEIEKYGPEQKHVSFFEFFKYKYQLNIDGVVAAYRFPY 386

Query: 219 -------------------------------VKEDLSDLVERVRWAQDNEDLVVVMVRNA 247
                                          +K DLSDLV+++ WA++N+D V  + + A
Sbjct: 387 LLVGDSVVFKQDSKYYEFFYKDLEAGKHFIPIKSDLSDLVQKLEWARENDDQVYKISKEA 446

Query: 248 QILAREKLMPQDILCYHAVLFN 269
           +  AR+ LMPQD+ CYH  L N
Sbjct: 447 RQYARDNLMPQDVFCYHVNLIN 468




Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91081993|ref|XP_969039.1| PREDICTED: similar to AGAP008037-PA [Tribolium castaneum] gi|270007375|gb|EFA03823.1| hypothetical protein TcasGA2_TC013938 [Tribolium castaneum] Back     alignment and taxonomy information
>gi|357622883|gb|EHJ74243.1| hypothetical protein KGM_01635 [Danaus plexippus] Back     alignment and taxonomy information
>gi|350402459|ref|XP_003486492.1| PREDICTED: KDEL motif-containing protein 1-like [Bombus impatiens] Back     alignment and taxonomy information
>gi|383856972|ref|XP_003703980.1| PREDICTED: KDEL motif-containing protein 1-like [Megachile rotundata] Back     alignment and taxonomy information
>gi|321474111|gb|EFX85077.1| hypothetical protein DAPPUDRAFT_314403 [Daphnia pulex] Back     alignment and taxonomy information
>gi|380029849|ref|XP_003698577.1| PREDICTED: LOW QUALITY PROTEIN: KDEL motif-containing protein 1-like [Apis florea] Back     alignment and taxonomy information
>gi|110776820|ref|XP_624980.2| PREDICTED: KDEL motif-containing protein 1-like [Apis mellifera] Back     alignment and taxonomy information
>gi|332025008|gb|EGI65195.1| KDEL motif-containing protein 1 [Acromyrmex echinatior] Back     alignment and taxonomy information
>gi|340711779|ref|XP_003394446.1| PREDICTED: LOW QUALITY PROTEIN: KDEL motif-containing protein 1-like [Bombus terrestris] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query279
UNIPROTKB|E1BSM9500 KDELC1 "Uncharacterized protei 0.591 0.33 0.573 8.3e-68
UNIPROTKB|Q0VD36502 KDELC1 "Uncharacterized protei 0.591 0.328 0.568 1.7e-67
UNIPROTKB|E2R8L5533 KDELC1 "Uncharacterized protei 0.591 0.309 0.568 7.3e-67
UNIPROTKB|Q6UW63502 KDELC1 "KDEL motif-containing 0.591 0.328 0.556 1.9e-66
MGI|MGI:1919300502 Kdelc1 "KDEL (Lys-Asp-Glu-Leu) 0.591 0.328 0.568 2.4e-66
UNIPROTKB|I3LFZ6504 I3LFZ6 "Uncharacterized protei 0.591 0.327 0.568 2.9e-62
ZFIN|ZDB-GENE-040426-878500 kdelc1 "KDEL (Lys-Asp-Glu-Leu) 0.659 0.368 0.561 9.9e-62
RGD|1304684432 Kdelc1 "KDEL (Lys-Asp-Glu-Leu) 0.580 0.375 0.572 1.4e-56
UNIPROTKB|E2RBX6508 KDELC2 "Uncharacterized protei 0.577 0.316 0.494 1.9e-55
UNIPROTKB|Q7Z4H8507 KDELC2 "KDEL motif-containing 0.577 0.317 0.494 1.9e-55
UNIPROTKB|E1BSM9 KDELC1 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
 Score = 551 (199.0 bits), Expect = 8.3e-68, Sum P(3) = 8.3e-68
 Identities = 97/169 (57%), Positives = 129/169 (76%)

Query:    60 VYRQCYGQHTGFKMFMDNLLLSLTRKVHLPDLEFWSNLGDWPLAKSAQ----YPMFSWCG 115
             VY + YG+H GF++FMD +LLSLTRKV +PD+EF+ NLGDWPL K       +P+FSWCG
Sbjct:   198 VYIKTYGEHVGFRIFMDAILLSLTRKVKMPDVEFFVNLGDWPLEKKKPPQKLHPIFSWCG 257

Query:   116 SNETFDIIMPTYDITESSLENMGRVSLDMLSVQGNNHKKWEQKEPKVFWRGRDSNRDRLK 175
             S+E+ DI+MPTYD+T+S LE MGRVSLDM+SVQ N    WE K    FWRGRDS ++RL+
Sbjct:   258 SSESKDIVMPTYDLTDSVLETMGRVSLDMMSVQANTGPSWEDKNTTAFWRGRDSRKERLE 317

Query:   176 LIDIARQHPDLFNASLTNFFFFKSEEEKYGPKTKHVSFFEFFDVKEDLS 224
             L+ ++R++P+L +A+ TNFFFFK +E  YGP  KH+SFF+FF  K  ++
Sbjct:   318 LVKLSRKYPELIDAAFTNFFFFKHDENLYGPIVKHISFFDFFKYKYQIN 366


GO:0005788 "endoplasmic reticulum lumen" evidence=IEA
UNIPROTKB|Q0VD36 KDELC1 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|E2R8L5 KDELC1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|Q6UW63 KDELC1 "KDEL motif-containing protein 1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
MGI|MGI:1919300 Kdelc1 "KDEL (Lys-Asp-Glu-Leu) containing 1" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|I3LFZ6 I3LFZ6 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-040426-878 kdelc1 "KDEL (Lys-Asp-Glu-Leu) containing 1" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
RGD|1304684 Kdelc1 "KDEL (Lys-Asp-Glu-Leu) containing 1" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|E2RBX6 KDELC2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|Q7Z4H8 KDELC2 "KDEL motif-containing protein 2" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query279
pfam05686281 pfam05686, Glyco_transf_90, Glycosyl transferase f 1e-32
smart00672256 smart00672, CAP10, Putative lipopolysaccharide-mod 3e-29
>gnl|CDD|218692 pfam05686, Glyco_transf_90, Glycosyl transferase family 90 Back     alignment and domain information
 Score =  120 bits (303), Expect = 1e-32
 Identities = 53/161 (32%), Positives = 74/161 (45%), Gaps = 21/161 (13%)

Query: 21  RIWTNVLHTTDGVIIVRYKLYEVCYSFNIVIISKEDQTHVYRQCYGQHTGFK-MFMDNLL 79
             W     T + V   + K +     F  VII+      VY + YG+    + +F    +
Sbjct: 18  EPWRETGITREMVERAKRKAH-----FRYVIINGR----VYVETYGESFQTRDVFTIWGI 68

Query: 80  LSLTRKV--HLPDLEFWSNLGDWPLAKSAQY--------PMFSWCGSNETFDIIMPTYDI 129
           L L RK    LPDLE   N GDWP+ K   Y        P+FS+CG ++T DI+ P +  
Sbjct: 69  LQLLRKYPGRLPDLELMFNCGDWPVVKKRDYRGPNANPPPLFSYCGDDDTLDIVFPDWSF 128

Query: 130 TESSLENMGRVSLDMLSV-QGNNHKKWEQKEPKVFWRGRDS 169
                 N+GR  L    + +GN   KWE +EP  +WRG  S
Sbjct: 129 WGWPEVNIGRWDLLRKDLKEGNTRVKWEDREPYAYWRGNPS 169


This family of glycosyl transferases are specifically (mannosyl) glucuronoxylomannan/galactoxylomannan -beta 1,2-xylosyltransferases, EC:2.4.2.-. Length = 281

>gnl|CDD|214773 smart00672, CAP10, Putative lipopolysaccharide-modifying enzyme Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 279
KOG2458|consensus528 100.0
PF05686395 Glyco_transf_90: Glycosyl transferase family 90; I 100.0
smart00672256 CAP10 Putative lipopolysaccharide-modifying enzyme 100.0
PF1352492 Glyco_trans_1_2: Glycosyl transferases group 1 96.3
PRK10307412 putative glycosyl transferase; Provisional 87.55
COG4641373 Uncharacterized protein conserved in bacteria [Fun 86.62
>KOG2458|consensus Back     alignment and domain information
Probab=100.00  E-value=1.9e-57  Score=431.63  Aligned_cols=252  Identities=28%  Similarity=0.518  Sum_probs=218.8

Q ss_pred             ceeEEe-eeeecCCCceEEEeeecccccc-eEEEEEecC-----------------------------------------
Q psy10617         19 QCRIWT-NVLHTTDGVIIVRYKLYEVCYS-FNIVIISKE-----------------------------------------   55 (279)
Q Consensus        19 ~~~~~~-~~~~~~dg~~~~r~~~~~~~~~-~~~~v~~~~-----------------------------------------   55 (279)
                      ..++.+ +.+|+.+|+++.+|+|+.+..+ +++++..++                                         
T Consensus        74 ~t~~~~P~~~~~~~~s~~~~~~l~cs~~s~~~~~~~~p~~~~~~s~~~~~~~~~~~~~tCPDyfrWIheDL~Pw~etgIt  153 (528)
T KOG2458|consen   74 TTRIPVPKPLDRKDGSFLRRYRLYCSLFSGLKREVLCPSSHVSKSPYILKNPVYHESCTCPDYFRWIHEDLCPWRETGIT  153 (528)
T ss_pred             cccccCCcccccccCCcchhhhhhhhhhhcccccccccccccccCccccCCCCCCCCCCCCcHHHHHHHhcCccccccch
Confidence            577777 8899999999999999987655 577776644                                         


Q ss_pred             -------------------C--cceeeeccCccchhhHHHHHHHHHHhhhhc--CCCCeEEEeccCCCCCccC-------
Q psy10617         56 -------------------D--QTHVYRQCYGQHTGFKMFMDNLLLSLTRKV--HLPDLEFWSNLGDWPLAKS-------  105 (279)
Q Consensus        56 -------------------~--~~~~Yr~~~~~~~~f~~~~d~~Ll~L~r~~--~lPDvEf~~n~~D~P~~~~-------  105 (279)
                                         |  +++.|++++|+++.||+|   ++++|+|+|  .|||+|++|||+|||.+.+       
T Consensus       154 re~~erak~~a~fr~vI~~g~~yv~~Y~ks~qtrd~ft~w---gilqLlr~ypgklPDlElmf~~~D~P~v~~~~~~~~~  230 (528)
T KOG2458|consen  154 REMAERAKRKAHFRLVIKEGRLYVENYRKSIQTRDVFTIW---GILQLLRTYPGKLPDLELMFNCGDWPLVRKKDFQGTP  230 (528)
T ss_pred             HHHhhhhhcccceeeeeecCceehhhhhhhhcccchHHHH---HHHHHHHhcCCCCCCceeeeecCCccccchhhccCCC
Confidence                               0  155589999999999999   888888886  8999999999999999976       


Q ss_pred             CCCCeeeeccCCCccceeccCCCcccc---cccccchhhhhhhhhcCCCCCCcccccCcEEeecCCCchhHHHHHHHHcc
Q psy10617        106 AQYPMFSWCGSNETFDIIMPTYDITES---SLENMGRVSLDMLSVQGNNHKKWEQKEPKVFWRGRDSNRDRLKLIDIARQ  182 (279)
Q Consensus       106 ~~~Pifs~cks~~~~DIl~Pd~~f~e~---~~~~~~~~~~d~~~~~~~~~~pW~~K~~kafWRG~~s~~~R~~Lv~~s~~  182 (279)
                      +|+|+||||+++++.|||||||+||.+   ++++|...+.++  +|||++++|.+|.|+|||||+++..+|.+|..++.+
T Consensus       231 ~ppPlF~yCg~~~s~DIVfPdwsfwgw~e~nik~w~~~~~~~--~egn~~~~W~~r~~yAywrGnp~v~e~~rl~ll~cn  308 (528)
T KOG2458|consen  231 PPPPLFSYCGSSESLDIVFPDWSFWGWAEVNIKPWEKLLEDI--VEGNKRPKWKNKNPYAYWRGNPSVAERLRLDLLSCN  308 (528)
T ss_pred             CCCCeEeecCCcccccccccCccccCChhhcccccchHHHHH--HhhccCCCcccCCceeEecCCCCccccchhhhhhcC
Confidence            689999999999999999999999865   567777766666  899999999999999999999999889999999999


Q ss_pred             CCCCccceeccccccchhHhhhCC-------CC-----------------------------CCCccccccc--------
Q psy10617        183 HPDLFNASLTNFFFFKSEEEKYGP-------KT-----------------------------KHVSFFEFFD--------  218 (279)
Q Consensus       183 ~p~l~da~~t~~~~~~~~~~~~g~-------~~-----------------------------~~~~y~d~f~--------  218 (279)
                      +|++.|+++|.+..+..+|.++|-       +|                             -.+.|+|||.        
T Consensus       309 ~s~~~d~~~~~y~qdw~~E~~~G~k~s~l~dqc~hrYkIyiEG~awsvs~kYilacDS~tL~v~p~YydfF~r~l~P~~H  388 (528)
T KOG2458|consen  309 NSELVDANATLYFQDWSKESKLGFKQSNLFDQCKHRYKIYIEGTAWSVSEKYILACDSMTLKVKPEYYDFFYRGLQPWKH  388 (528)
T ss_pred             CchhhchhhhhHHHhhhhhhhccccccchhhhcceeeEEEEeeeeeeeecceeeecceeEEeecchHHHHHhhcccchhc
Confidence            999999888876544455555551       11                             1467999987        


Q ss_pred             ---CCCChhhHHHHHHHhhhChHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHhccC
Q psy10617        219 ---VKEDLSDLVERVRWAQDNEDLVVVMVRNAQILAREKLMPQDILCYHAVLFNFNFMGS  275 (279)
Q Consensus       219 ---V~~D~sDL~e~I~w~~~hd~~A~~IA~~a~~f~~~~L~~~~v~cY~~~LL~eYa~~s  275 (279)
                         |+++|+||.+||+|+++|+++||+||++|++|+++.|.|++|||||+|||+|||++-
T Consensus       389 YwPIk~~c~slkfaV~Wgn~h~~~Aq~Igk~gs~f~r~~L~m~~vYdYmfhllqeYakL~  448 (528)
T KOG2458|consen  389 YWPIKSNCRSLKFAVDWGNNHDEEAQKIGKEGSEFARKNLKMDYVYDYMFHLLQEYAKLQ  448 (528)
T ss_pred             ccccccchhHHHHHHHhcccChHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHh
Confidence               899999999999999999999999999999999999999999999999999999763



>PF05686 Glyco_transf_90: Glycosyl transferase family 90; InterPro: IPR006598 Cryptococcus neoformans is a pathogenic fungus which most commonly affects the central nervous system and causes fatal meningoencephalitis primarily in patients with AIDS Back     alignment and domain information
>smart00672 CAP10 Putative lipopolysaccharide-modifying enzyme Back     alignment and domain information
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1 Back     alignment and domain information
>PRK10307 putative glycosyl transferase; Provisional Back     alignment and domain information
>COG4641 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query279
2di7_A124 BK158_1; beta-sandwich, immunoglobulin-like fold, 1e-05
>2di7_A BK158_1; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 124 Back     alignment and structure
 Score = 43.1 bits (101), Expect = 1e-05
 Identities = 13/52 (25%), Positives = 20/52 (38%), Gaps = 1/52 (1%)

Query: 6   VVRVHGLDINGSRQCRIWTNVLHTTDGVIIVRYKLYEVCYSFNIVIISKEDQ 57
           V +V           R+   VL   DG  IVRY++Y    +  + I  +   
Sbjct: 58  VFQVKVSAPEEQF-TRVGVQVLDRKDGSFIVRYRMYASYKNLKVEIKFQGQH 108


Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query279
2di7_A124 BK158_1; beta-sandwich, immunoglobulin-like fold, 98.71
2w0p_A94 Filamin-A; alternative splicing, cytoskeleton/comp 95.23
2bp3_A97 Filamin A; structural protein, cytoskeleton/comple 94.53
2ee6_A105 Filamin-B; beta-sandwich, immunoglobulin-like fold 94.13
3rgh_A100 Filamin-A; cell adhesion, cytoskeleton-complex, di 94.08
2di8_A111 Filamin-B; beta-sandwich, immunoglobulin-like fold 94.08
2dic_A105 Filamin-B; beta-sandwich, immunoglobulin-like fold 93.89
2di9_A131 Filamin-B; beta-sandwich, immunoglobulin-like fold 93.64
2k9u_A119 Gamma filamin; cytoskeletal complex, alternative s 93.34
3cnk_A89 Filamin-A; FLNA24, X-RAY crystalography, homodimer 93.2
2dia_A113 Filamin-B; beta-sandwich, immunoglobulin-like fold 92.3
2dmb_A124 Filamin-B; beta-sandwich, immunoglobulin-like fold 92.01
2d7o_A111 Filamin-C; beta-sandwich, immunoglobulin-like fold 91.55
2dj4_A108 Filamin-B; beta-sandwich, immunoglobulin-like fold 91.15
2ds4_A113 Tripartite motif protein 45; beta-sandwich, immuno 91.11
2eea_A115 Filamin-B; beta-sandwich, immunoglobulin-like fold 90.91
2j3s_A288 Filamin-A; cytoskeleton, phosphorylation, structur 90.76
2eec_A125 Filamin-B; beta-sandwich, immunoglobulin-like fold 90.25
2k7q_A191 Filamin-A; IG-like, ABP-280, actin binding protein 89.33
1v05_A96 Filamin C; actin-binding protein, immunoglobulin; 89.25
2dib_A128 Filamin-B; beta-sandwich, immunoglobulin-like fold 89.16
2e9j_A119 Filamin-B; beta-sandwich, immunoglobulin-like fold 88.41
2j3s_A288 Filamin-A; cytoskeleton, phosphorylation, structur 87.97
2d7m_A115 Filamin-C; beta-sandwich, immunoglobulin-like fold 87.68
1wlh_A311 Gelation factor; ABP-120, filamin, immunoglobulin 86.9
3okp_A394 GDP-mannose-dependent alpha-(1-6)-phosphatidylino 84.75
2k7p_A188 Filamin-A; IG-like, ABP-280, actin binding protein 84.43
2jjm_A394 Glycosyl transferase, group 1 family protein; anth 84.28
2iw1_A374 Lipopolysaccharide core biosynthesis protein RFAG; 83.16
2nqc_A138 Filamin-C; immunoglobulin, metal binding, immune s 83.13
>2di7_A BK158_1; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} Back     alignment and structure
Probab=98.71  E-value=6.5e-09  Score=84.04  Aligned_cols=53  Identities=23%  Similarity=0.323  Sum_probs=44.6

Q ss_pred             ccceeeeccccc------CCCCceeEEeeeeecCCCceEEEeeecccccceEEEEEecC
Q psy10617          3 NNIVVRVHGLDI------NGSRQCRIWTNVLHTTDGVIIVRYKLYEVCYSFNIVIISKE   55 (279)
Q Consensus         3 ~~~~~~~~~~~~------~~~~~~~~~~~~~~~~dg~~~~r~~~~~~~~~~~~~v~~~~   55 (279)
                      +|+|.+.|+..+      +..+.||||++++|++||||++|||++.++.+++|+|++++
T Consensus        48 ~~~t~g~g~~~f~V~I~~~~~~~~~i~~~v~Dn~DGsy~v~Yr~~~~~g~~~I~V~~~~  106 (124)
T 2di7_A           48 NKFTSSPGEKVFQVKVSAPEEQFTRVGVQVLDRKDGSFIVRYRMYASYKNLKVEIKFQG  106 (124)
T ss_dssp             CBCCSCCCSSCCEEEEECSSCCCCCCCCEEECCSSSCCEEECCCCSCCSCCEEEEESSS
T ss_pred             CEeeeCCCCCceEEEEecCCCCceEeeeEEEECCCCeEEEEEECCCCCCCEEEEEEECC
Confidence            467776543332      55677999999999999999999999999999999999986



>2w0p_A Filamin-A; alternative splicing, cytoskeleton/complex, phosphoprotein, disease mutation, immunoglobulin like, zinc, complex; 1.90A {Homo sapiens} SCOP: b.1.18.10 PDB: 2brq_A* 2jf1_A 3isw_A Back     alignment and structure
>2bp3_A Filamin A; structural protein, cytoskeleton/complex, actin binding protein, cytoskeleton, complex; 2.32A {Homo sapiens} SCOP: b.1.18.10 PDB: 2aav_A Back     alignment and structure
>2ee6_A Filamin-B; beta-sandwich, immunoglobulin-like fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Back     alignment and structure
>3rgh_A Filamin-A; cell adhesion, cytoskeleton-complex, disease mutation, immun like, cytoskeleton, actin-binding, cell junction, shape; HET: CME; 2.44A {Homo sapiens} SCOP: b.1.18.0 Back     alignment and structure
>2di8_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10 Back     alignment and structure
>2dic_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10 Back     alignment and structure
>2di9_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10 Back     alignment and structure
>2k9u_A Gamma filamin; cytoskeletal complex, alternative splicing, cell adhesion, cell junction, cell shape, cytoplasm, cytoskeleton; NMR {Homo sapiens} Back     alignment and structure
>3cnk_A Filamin-A; FLNA24, X-RAY crystalography, homodimer, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; 1.65A {Homo sapiens} Back     alignment and structure
>2dia_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10 Back     alignment and structure
>2dmb_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10 Back     alignment and structure
>2d7o_A Filamin-C; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10 Back     alignment and structure
>2dj4_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.18.10 Back     alignment and structure
>2ds4_A Tripartite motif protein 45; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} Back     alignment and structure
>2eea_A Filamin-B; beta-sandwich, immunoglobulin-like fold, interaction with GP1BA, structural genomics, NPPSFA; NMR {Homo sapiens} Back     alignment and structure
>2j3s_A Filamin-A; cytoskeleton, phosphorylation, structural protein; 2.5A {Homo sapiens} SCOP: b.1.18.10 b.1.18.10 PDB: 2e9i_A Back     alignment and structure
>2eec_A Filamin-B; beta-sandwich, immunoglobulin-like fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Back     alignment and structure
>2k7q_A Filamin-A; IG-like, ABP-280, actin binding protein, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; NMR {Homo sapiens} Back     alignment and structure
>1v05_A Filamin C; actin-binding protein, immunoglobulin; 1.43A {Homo sapiens} SCOP: b.1.18.10 PDB: 2eed_A Back     alignment and structure
>2dib_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10 Back     alignment and structure
>2e9j_A Filamin-B; beta-sandwich, immunoglobulin-like fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Back     alignment and structure
>2j3s_A Filamin-A; cytoskeleton, phosphorylation, structural protein; 2.5A {Homo sapiens} SCOP: b.1.18.10 b.1.18.10 PDB: 2e9i_A Back     alignment and structure
>2d7m_A Filamin-C; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10 Back     alignment and structure
>1wlh_A Gelation factor; ABP-120, filamin, immunoglobulin fold, ROD domain, structural protein; 2.80A {Dictyostelium discoideum} SCOP: b.1.18.10 b.1.18.10 b.1.18.10 PDB: 1ksr_A Back     alignment and structure
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* Back     alignment and structure
>2k7p_A Filamin-A; IG-like, ABP-280, actin binding protein, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; NMR {Homo sapiens} Back     alignment and structure
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* Back     alignment and structure
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* Back     alignment and structure
>2nqc_A Filamin-C; immunoglobulin, metal binding, immune system; 2.05A {Homo sapiens} SCOP: b.1.18.10 PDB: 2d7q_A 2k3t_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00