Psyllid ID: psy10627

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90--
Protein Sequence
MINKVYSILFSSQAEIDGRQETFKSLKEFGLKVSPPREPELTKLDELRRQLASSWEEQRTRLDHAHQAQMFKEAADQAENWLVTKEATEYRP
Secondary Structure (PSIPRED)
cHHHHHHHHHHHHHHHHccHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHcccc
Secondary Structure Prediction (SSPRO)
ccccEccccccccHEEcccHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccc
Coil and Loop (DISEMBL)
MINKVYSILFSSQAEIDGRQETFKSLKEfglkvspprepeltkLDELRRQLASSWEEQRTRLDHAHQAQMFKEAADQAENWLVTkeateyrp
Flexible Loop (DISEMBL)
MINKVYSIlfssqaeidgRQETFKSLkefglkvspprepeltkldELRRQLASSWEEQRTRLDHAHQAQMFKEAADQAENWlvtkeateyrp
Low Complexity Region (SEG)
MINKVYSILFSSQAEIDGRQETFKSLKEFGLKVSPPREPELTKLDELRRQLASSWEEQRTRLDHAHQAQMFKEAADQAENWLVTKEATEYRP
Disordered region (IsUnstruct)
*****YSILF**********************************************************************************
Disordered Region (DISOPRED)
*******ILFSSQAEIDGRQETFKSLKEFGL**************ELRRQLASSWEEQRTRLDHAHQAQMFKEAADQAENWLVTKEAT****
Disordered Region (DISEMBL)
MINKVYSILFSSQAEIDGRQETFKSLKEFGLKVSPPREPELTKLDELRRQLASSWEEQRTRLDHAHQAQMFKEAADQAENWLVTKEATEYRP
Disordered Region (DISPRO)
*INKVYSILFSSQAEIDGRQETFKSLKEFGLKVSPPREPELTKLDELRRQLASSWEEQRTRLDHAHQAQMFKEAADQAENWLVTKEAT****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MINKVYSILFSSQAEIDGRQETFKSLKEFGLKVSPPREPELTKLDELRRQLASSWEEQRTRLDHAHQAQMFKEAADQAENWLVTKEATEYRP
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	92	2.2.26 [Sep-21-2011]
P16086	2472	Spectrin alpha chain, non	yes	N/A	0.793	0.029	0.362	1e-07
P16546	2472	Spectrin alpha chain, non	yes	N/A	0.793	0.029	0.362	1e-07
P07751	2477	Spectrin alpha chain, non	yes	N/A	0.793	0.029	0.35	1e-06
Q13813	2472	Spectrin alpha chain, non	yes	N/A	0.793	0.029	0.35	1e-06
P02549	2419	Spectrin alpha chain, ery	no	N/A	0.815	0.031	0.304	0.0003

>sp|P16086|SPTN1_RAT Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus GN=Sptan1 PE=1 SV=2

 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 46/80 (57%), Gaps = 7/80 (8%)

Query: 15   EIDGRQETFKSLKEFGLKV-------SPPREPELTKLDELRRQLASSWEEQRTRLDHAHQ 67
            EID R  TF++ ++FG ++       SP  + +L  LD+ R  L  +W ++R  LDH  +
Sbjct: 1387 EIDARAGTFQAFEQFGQQLLAHGHYASPEIKEKLDILDQERTDLEKAWVQRRMMLDHCLE 1446

Query: 68   AQMFKEAADQAENWLVTKEA 87
             Q+F    +QAENW+  +EA
Sbjct: 1447 LQLFHRDCEQAENWMAAREA 1466

Fodrin, which seems to be involved in secretion, interacts with calmodulin in a calcium-dependent manner and is thus candidate for the calcium-dependent movement of the cytoskeleton at the membrane.
Rattus norvegicus (taxid: 10116)

>sp|P16546|SPTN1_MOUSE Spectrin alpha chain, non-erythrocytic 1 OS=Mus musculus GN=Sptan1 PE=1 SV=4

 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 46/80 (57%), Gaps = 7/80 (8%)

Query: 15   EIDGRQETFKSLKEFGLKV-------SPPREPELTKLDELRRQLASSWEEQRTRLDHAHQ 67
            EID R  TF++ ++FG ++       SP  + +L  LD+ R  L  +W ++R  LDH  +
Sbjct: 1387 EIDARAGTFQAFEQFGQQLLAHGHYASPEIKEKLDILDQERTDLEKAWVQRRMMLDHCLE 1446

Query: 68   AQMFKEAADQAENWLVTKEA 87
             Q+F    +QAENW+  +EA
Sbjct: 1447 LQLFHRDCEQAENWMAAREA 1466

Fodrin, which seems to be involved in secretion, interacts with calmodulin in a calcium-dependent manner and is thus candidate for the calcium-dependent movement of the cytoskeleton at the membrane.

Mus musculus (taxid: 10090)

>sp|P07751|SPTN1_CHICK Spectrin alpha chain, non-erythrocytic 1 OS=Gallus gallus GN=SPTAN1 PE=1 SV=3

 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 7/80 (8%)

Query: 15   EIDGRQETFKSLKEFGLKV-------SPPREPELTKLDELRRQLASSWEEQRTRLDHAHQ 67
            EID R  TF++ ++FG ++       SP  + +L  LD+ R  L  +W ++R  LD   +
Sbjct: 1387 EIDARAGTFQAFEQFGQQLLARGHYASPEIKEKLDILDQERTDLEKAWVQRRMMLDQCLE 1446

Query: 68   AQMFKEAADQAENWLVTKEA 87
             Q+F    +QAENW+  +EA
Sbjct: 1447 LQLFHRDCEQAENWMAAREA 1466

Morphologically, spectrin-like proteins appear to be related to spectrin, showing a flexible rod-like structure. They can bind actin but seem to differ in their calmodulin-binding activity. In nonerythroid tissues, spectrins, in association with some other proteins, may play an important role in membrane organization.

Gallus gallus (taxid: 9031)

>sp|Q13813|SPTN1_HUMAN Spectrin alpha chain, non-erythrocytic 1 OS=Homo sapiens GN=SPTAN1 PE=1 SV=3

 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 7/80 (8%)

Query: 15   EIDGRQETFKSLKEFGLKV-------SPPREPELTKLDELRRQLASSWEEQRTRLDHAHQ 67
            EID R  TF++ ++FG ++       SP  + +L  LD+ R  L  +W ++R  LD   +
Sbjct: 1387 EIDARAGTFQAFEQFGQQLLAHGHYASPEIKQKLDILDQERADLEKAWVQRRMMLDQCLE 1446

Query: 68   AQMFKEAADQAENWLVTKEA 87
             Q+F    +QAENW+  +EA
Sbjct: 1447 LQLFHRDCEQAENWMAAREA 1466

Fodrin, which seems to be involved in secretion, interacts with calmodulin in a calcium-dependent manner and is thus candidate for the calcium-dependent movement of the cytoskeleton at the membrane.

Homo sapiens (taxid: 9606)

>sp|P02549|SPTA1_HUMAN Spectrin alpha chain, erythrocytic 1 OS=Homo sapiens GN=SPTA1 PE=1 SV=5

 Score = 43.9 bits (102), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 44/82 (53%), Gaps = 7/82 (8%)

Query: 14   AEIDGRQETFKSLKEF-------GLKVSPPREPELTKLDELRRQLASSWEEQRTRLDHAH 66
            A+++    TF++L++F       G   SP  E +L  +   R  L  +WE+++  LD   
Sbjct: 1336 ADMEAEAPTFQALEDFSAELIDSGHHASPEIEKKLQAVKLERDDLEKAWEKRKKILDQCL 1395

Query: 67   QAQMFKEAADQAENWLVTKEAT 88
            + QMF+   DQ E+W+V +E +
Sbjct: 1396 ELQMFQGNCDQVESWMVARENS 1417

Spectrin is the major constituent of the cytoskeletal network underlying the erythrocyte plasma membrane. It associates with band 4.1 and actin to form the cytoskeletal superstructure of the erythrocyte plasma membrane.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	92
328720391	4083	PREDICTED: spectrin beta chain-like isof	0.739	0.016	0.6	1e-17
328720389	4047	PREDICTED: spectrin beta chain-like isof	0.739	0.016	0.6	1e-17
340717276	4224	PREDICTED: spectrin beta chain, brain 4-	0.815	0.017	0.551	1e-14
340717274	4143	PREDICTED: spectrin beta chain, brain 4-	0.815	0.018	0.551	1e-14
328777761	4216	PREDICTED: spectrin beta chain [Apis mel	0.815	0.017	0.538	2e-14
350407651	4247	PREDICTED: spectrin beta chain, brain 4-	0.815	0.017	0.538	3e-14
380030708	4164	PREDICTED: LOW QUALITY PROTEIN: spectrin	0.815	0.018	0.551	4e-14
307173781	4197	Spectrin beta chain, brain 4 [Camponotus	0.815	0.017	0.525	6e-14
383856370	4280	PREDICTED: spectrin beta chain, brain 4-	0.815	0.017	0.525	8e-14
307194983	3331	Spectrin beta chain, brain 4 [Harpegnath	0.815	0.022	0.5	1e-12

>gi|328720391|ref|XP_001946129.2| PREDICTED: spectrin beta chain-like isoform 3 [Acyrthosiphon pisum]

 Score = 93.6 bits (231), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 45/75 (60%), Positives = 58/75 (77%)

Query: 13   QAEIDGRQETFKSLKEFGLKVSPPREPELTKLDELRRQLASSWEEQRTRLDHAHQAQMFK 72
            +AEI+GRQE FK+LKE GLK++P  E EL  LDELRR L+++WEE+RT L  A + Q+FK
Sbjct: 2605 KAEINGRQEHFKTLKESGLKINPIPEKELAHLDELRRTLSAAWEERRTMLSQALELQIFK 2664

Query: 73   EAADQAENWLVTKEA 87
              ADQ +NWL +KEA
Sbjct: 2665 NQADQVDNWLASKEA 2679

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328720389|ref|XP_003247015.1| PREDICTED: spectrin beta chain-like isoform 2 [Acyrthosiphon pisum]

 Score = 93.6 bits (231), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 45/75 (60%), Positives = 58/75 (77%)

Query: 13   QAEIDGRQETFKSLKEFGLKVSPPREPELTKLDELRRQLASSWEEQRTRLDHAHQAQMFK 72
            +AEI+GRQE FK+LKE GLK++P  E EL  LDELRR L+++WEE+RT L  A + Q+FK
Sbjct: 2605 KAEINGRQEHFKTLKESGLKINPIPEKELAHLDELRRTLSAAWEERRTMLSQALELQIFK 2664

Query: 73   EAADQAENWLVTKEA 87
              ADQ +NWL +KEA
Sbjct: 2665 NQADQVDNWLASKEA 2679

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340717276|ref|XP_003397111.1| PREDICTED: spectrin beta chain, brain 4-like isoform 2 [Bombus terrestris]

 Score = 84.0 bits (206), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 43/78 (55%), Positives = 58/78 (74%), Gaps = 3/78 (3%)

Query: 13   QAEIDGRQETFKSLKEFG---LKVSPPREPELTKLDELRRQLASSWEEQRTRLDHAHQAQ 69
            +AEIDGRQ+TFK+LKE G   L ++   +  L  L+ELR+ LA++WE +R +L  AHQ Q
Sbjct: 2665 KAEIDGRQDTFKALKEHGQKLLAINEDIKDNLEHLEELRQGLANAWETRRQKLTQAHQLQ 2724

Query: 70   MFKEAADQAENWLVTKEA 87
            +FKE ADQA++WL TKEA
Sbjct: 2725 LFKEQADQADSWLATKEA 2742

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340717274|ref|XP_003397110.1| PREDICTED: spectrin beta chain, brain 4-like isoform 1 [Bombus terrestris]

 Score = 84.0 bits (206), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 43/78 (55%), Positives = 58/78 (74%), Gaps = 3/78 (3%)

Query: 13   QAEIDGRQETFKSLKEFG---LKVSPPREPELTKLDELRRQLASSWEEQRTRLDHAHQAQ 69
            +AEIDGRQ+TFK+LKE G   L ++   +  L  L+ELR+ LA++WE +R +L  AHQ Q
Sbjct: 2609 KAEIDGRQDTFKALKEHGQKLLAINEDIKDNLEHLEELRQGLANAWETRRQKLTQAHQLQ 2668

Query: 70   MFKEAADQAENWLVTKEA 87
            +FKE ADQA++WL TKEA
Sbjct: 2669 LFKEQADQADSWLATKEA 2686

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328777761|ref|XP_396777.4| PREDICTED: spectrin beta chain [Apis mellifera]

 Score = 82.8 bits (203), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 42/78 (53%), Positives = 58/78 (74%), Gaps = 3/78 (3%)

Query: 13   QAEIDGRQETFKSLKEFG---LKVSPPREPELTKLDELRRQLASSWEEQRTRLDHAHQAQ 69
            +AEIDGRQ+TFK+LKE G   L ++   +  L  L++LR+ LA++WE +R +L  AHQ Q
Sbjct: 2658 KAEIDGRQDTFKALKEHGQKLLTINEDVKDNLEHLEKLRQGLANAWETKRQKLTQAHQLQ 2717

Query: 70   MFKEAADQAENWLVTKEA 87
            +FKE ADQA++WL TKEA
Sbjct: 2718 LFKEQADQADSWLATKEA 2735

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350407651|ref|XP_003488149.1| PREDICTED: spectrin beta chain, brain 4-like [Bombus impatiens]

 Score = 82.4 bits (202), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 42/78 (53%), Positives = 57/78 (73%), Gaps = 3/78 (3%)

Query: 13   QAEIDGRQETFKSLKEFG---LKVSPPREPELTKLDELRRQLASSWEEQRTRLDHAHQAQ 69
            +AEIDGRQ+TFK+LKE G   L ++   +  L  L+ELR+ L ++WE +R +L  AHQ Q
Sbjct: 2688 KAEIDGRQDTFKALKEHGQKLLAINEDIKDNLEHLEELRQGLVNAWETRRQKLTQAHQLQ 2747

Query: 70   MFKEAADQAENWLVTKEA 87
            +FKE ADQA++WL TKEA
Sbjct: 2748 LFKEQADQADSWLATKEA 2765

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380030708|ref|XP_003698985.1| PREDICTED: LOW QUALITY PROTEIN: spectrin beta chain, brain 4-like [Apis florea]

 Score = 82.0 bits (201), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 43/78 (55%), Positives = 57/78 (73%), Gaps = 3/78 (3%)

Query: 13   QAEIDGRQETFKSLKEFGLKVSPPREP---ELTKLDELRRQLASSWEEQRTRLDHAHQAQ 69
            +AEIDGRQ+TFK+LKE G K+    E     L  L++LR+ LA++WE +R +L  AHQ Q
Sbjct: 2609 KAEIDGRQDTFKALKEHGQKLITINEDVKDNLEHLEKLRQGLANAWETRRQKLTQAHQLQ 2668

Query: 70   MFKEAADQAENWLVTKEA 87
            +FKE ADQA++WL TKEA
Sbjct: 2669 LFKEQADQADSWLATKEA 2686

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307173781|gb|EFN64568.1| Spectrin beta chain, brain 4 [Camponotus floridanus]

 Score = 81.6 bits (200), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 41/78 (52%), Positives = 55/78 (70%), Gaps = 3/78 (3%)

Query: 13   QAEIDGRQETFKSLKEFG---LKVSPPREPELTKLDELRRQLASSWEEQRTRLDHAHQAQ 69
            +AEIDGRQ+TFK LKE G   L +    +  L  L+ELR+ L ++W+ +R +L  AHQ Q
Sbjct: 2654 KAEIDGRQDTFKGLKEHGQKLLSIDEEIKDNLEHLEELRQTLGNAWDNRRQKLTQAHQLQ 2713

Query: 70   MFKEAADQAENWLVTKEA 87
            +FKE ADQA++WL TKEA
Sbjct: 2714 LFKEQADQADSWLATKEA 2731

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383856370|ref|XP_003703682.1| PREDICTED: spectrin beta chain, brain 4-like [Megachile rotundata]

 Score = 80.9 bits (198), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 41/78 (52%), Positives = 57/78 (73%), Gaps = 3/78 (3%)

Query: 13   QAEIDGRQETFKSLKEFG---LKVSPPREPELTKLDELRRQLASSWEEQRTRLDHAHQAQ 69
            +AEIDGRQ+TFK+LKE G   L ++   E  L  L+++R+ L ++WE +R +L  AHQ Q
Sbjct: 2727 KAEIDGRQDTFKALKEHGQKLLAINEDVEDNLEHLEDIRQGLINAWEIRRQKLTQAHQLQ 2786

Query: 70   MFKEAADQAENWLVTKEA 87
            +FKE ADQA++WL TKEA
Sbjct: 2787 LFKEQADQADSWLATKEA 2804

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307194983|gb|EFN77073.1| Spectrin beta chain, brain 4 [Harpegnathos saltator]

 Score = 77.0 bits (188), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 39/78 (50%), Positives = 53/78 (67%), Gaps = 3/78 (3%)

Query: 13   QAEIDGRQETFKSLKEFG---LKVSPPREPELTKLDELRRQLASSWEEQRTRLDHAHQAQ 69
            +AEIDGRQ+ FK LKE G   L +    +  L  L+ LR+ L  +W+++R +L  AHQ Q
Sbjct: 1762 KAEIDGRQDIFKGLKEHGQKLLSIDEDVKDNLEHLEGLRQTLVHAWDDRRQKLTQAHQLQ 1821

Query: 70   MFKEAADQAENWLVTKEA 87
            +FKE ADQA++WL TKEA
Sbjct: 1822 LFKEQADQADSWLATKEA 1839

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	92
FB|FBgn0004167	4337	kst "karst" [Drosophila melano	0.815	0.017	0.409	1e-07
MGI|MGI:98386	2472	Sptan1 "spectrin alpha, non-er	0.815	0.030	0.353	1.5e-07
RGD|621714	2472	Sptan1 "spectrin, alpha, non-e	0.815	0.030	0.353	1.5e-07
UNIPROTKB|E9PSZ3	2477	Sptan1 "Spectrin alpha chain,	0.815	0.030	0.353	1.5e-07
UNIPROTKB|E9PU22	2478	Sptan1 "Spectrin alpha chain,	0.815	0.030	0.353	1.5e-07
UNIPROTKB|E1BFB0	2472	SPTAN1 "Uncharacterized protei	0.815	0.030	0.341	8.5e-07
UNIPROTKB|F1NHT4	2445	SPTAN1 "Spectrin alpha chain,	0.815	0.030	0.341	1.1e-06
UNIPROTKB|F1NHT3	2465	SPTAN1 "Spectrin alpha chain,	0.815	0.030	0.341	1.1e-06
UNIPROTKB|F1NIU0	2470	SPTAN1 "Spectrin alpha chain,	0.815	0.030	0.341	1.1e-06
UNIPROTKB|Q13813	2472	SPTAN1 "Spectrin alpha chain,	0.815	0.030	0.341	1.1e-06

FB|FBgn0004167 kst "karst" [Drosophila melanogaster (taxid:7227)]

 Score = 141 (54.7 bits), Expect = 1.0e-07, P = 1.0e-07
 Identities = 34/83 (40%), Positives = 48/83 (57%)

Query:    13 QAEIDGRQETFKSLKEFGLKVSP-PRE--PE-----LTKLDELRRQLASSWEEQRTRLDH 64
             + EI+GRQE F  LK+ G ++S  P++  P+     L  L+EL + L  +W E+   L  
Sbjct:  2664 KVEIEGRQEAFAGLKQQGEQLSKRPQQQQPDNVRKYLLVLEELHQTLNEAWSERARDLTE 2723

Query:    65 AHQAQMFKEAADQAENWLVTKEA 87
             AHQ Q+FK   +Q E WL  KEA
Sbjct:  2724 AHQLQLFKAQVEQVEIWLANKEA 2746

GO:0030707 "ovarian follicle cell development" evidence=TAS

GO:0007009 "plasma membrane organization" evidence=TAS

GO:0003779 "actin binding" evidence=ISS;IDA

GO:0008017 "microtubule binding" evidence=IDA

GO:0008092 "cytoskeletal protein binding" evidence=ISS

GO:0008091 "spectrin" evidence=ISS

GO:0016327 "apicolateral plasma membrane" evidence=TAS

GO:0045186 "zonula adherens assembly" evidence=TAS

GO:0000910 "cytokinesis" evidence=IMP

GO:0005543 "phospholipid binding" evidence=IEA

GO:0006897 "endocytosis" evidence=IMP

GO:0016324 "apical plasma membrane" evidence=IDA

GO:0005912 "adherens junction" evidence=IDA

GO:0032432 "actin filament bundle" evidence=IDA

GO:0042060 "wound healing" evidence=IMP

GO:0010797 "regulation of multivesicular body size involved in endosome transport" evidence=IMP

GO:0005515 "protein binding" evidence=IPI

GO:0032509 "endosome transport via multivesicular body sorting pathway" evidence=IMP

MGI|MGI:98386 Sptan1 "spectrin alpha, non-erythrocytic 1" [Mus musculus (taxid:10090)]

 Score = 137 (53.3 bits), Expect = 1.5e-07, P = 1.5e-07
 Identities = 29/82 (35%), Positives = 47/82 (57%)

Query:    13 QAEIDGRQETFKSLKEFGLKV-------SPPREPELTKLDELRRQLASSWEEQRTRLDHA 65
             + EID R  TF++ ++FG ++       SP  + +L  LD+ R  L  +W ++R  LDH 
Sbjct:  1385 RTEIDARAGTFQAFEQFGQQLLAHGHYASPEIKEKLDILDQERTDLEKAWVQRRMMLDHC 1444

Query:    66 HQAQMFKEAADQAENWLVTKEA 87
              + Q+F    +QAENW+  +EA
Sbjct:  1445 LELQLFHRDCEQAENWMAAREA 1466

GO:0003779 "actin binding" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005516 "calmodulin binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005856 "cytoskeleton" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISO

GO:0005916 "fascia adherens" evidence=IDA

GO:0016020 "membrane" evidence=IDA

GO:0016328 "lateral plasma membrane" evidence=IDA

GO:0019905 "syntaxin binding" evidence=ISO

GO:0030018 "Z disc" evidence=IDA

GO:0030507 "spectrin binding" evidence=IDA

GO:0030863 "cortical cytoskeleton" evidence=IDA

GO:0031532 "actin cytoskeleton reorganization" evidence=ISO

GO:0032403 "protein complex binding" evidence=ISO

GO:0032437 "cuticular plate" evidence=IDA

GO:0033270 "paranode region of axon" evidence=IDA

GO:0043234 "protein complex" evidence=ISO

GO:0046872 "metal ion binding" evidence=IEA

GO:0046982 "protein heterodimerization activity" evidence=IDA

GO:0047485 "protein N-terminus binding" evidence=ISO

GO:0051693 "actin filament capping" evidence=IEA

RGD|621714 Sptan1 "spectrin, alpha, non-erythrocytic 1" [Rattus norvegicus (taxid:10116)]

 Score = 137 (53.3 bits), Expect = 1.5e-07, P = 1.5e-07
 Identities = 29/82 (35%), Positives = 47/82 (57%)

Query:    13 QAEIDGRQETFKSLKEFGLKV-------SPPREPELTKLDELRRQLASSWEEQRTRLDHA 65
             + EID R  TF++ ++FG ++       SP  + +L  LD+ R  L  +W ++R  LDH 
Sbjct:  1385 RTEIDARAGTFQAFEQFGQQLLAHGHYASPEIKEKLDILDQERTDLEKAWVQRRMMLDHC 1444

Query:    66 HQAQMFKEAADQAENWLVTKEA 87
              + Q+F    +QAENW+  +EA
Sbjct:  1445 LELQLFHRDCEQAENWMAAREA 1466

GO:0003779 "actin binding" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0005516 "calmodulin binding" evidence=IEA

GO:0005829 "cytosol" evidence=TAS

GO:0005886 "plasma membrane" evidence=IDA

GO:0005916 "fascia adherens" evidence=ISO

GO:0008091 "spectrin" evidence=TAS

GO:0015630 "microtubule cytoskeleton" evidence=ISO

GO:0016020 "membrane" evidence=ISO

GO:0016328 "lateral plasma membrane" evidence=ISO

GO:0019905 "syntaxin binding" evidence=IPI

GO:0030018 "Z disc" evidence=ISO

GO:0030507 "spectrin binding" evidence=ISO

GO:0030863 "cortical cytoskeleton" evidence=ISO

GO:0031532 "actin cytoskeleton reorganization" evidence=IMP

GO:0032403 "protein complex binding" evidence=IPI

GO:0032437 "cuticular plate" evidence=ISO

GO:0033270 "paranode region of axon" evidence=ISO

GO:0043231 "intracellular membrane-bounded organelle" evidence=ISO

GO:0043234 "protein complex" evidence=IDA

GO:0046982 "protein heterodimerization activity" evidence=ISO

GO:0047485 "protein N-terminus binding" evidence=IPI

GO:0051693 "actin filament capping" evidence=IEA

UNIPROTKB|E9PSZ3 Sptan1 "Spectrin alpha chain, non-erythrocytic 1" [Rattus norvegicus (taxid:10116)]

 Score = 137 (53.3 bits), Expect = 1.5e-07, P = 1.5e-07
 Identities = 29/82 (35%), Positives = 47/82 (57%)

Query:    13 QAEIDGRQETFKSLKEFGLKV-------SPPREPELTKLDELRRQLASSWEEQRTRLDHA 65
             + EID R  TF++ ++FG ++       SP  + +L  LD+ R  L  +W ++R  LDH 
Sbjct:  1385 RTEIDARAGTFQAFEQFGQQLLAHGHYASPEIKEKLDILDQERTDLEKAWVQRRMMLDHC 1444

Query:    66 HQAQMFKEAADQAENWLVTKEA 87
              + Q+F    +QAENW+  +EA
Sbjct:  1445 LELQLFHRDCEQAENWMAAREA 1466

GO:0005509 "calcium ion binding" evidence=IEA

UNIPROTKB|E9PU22 Sptan1 "Spectrin alpha chain, non-erythrocytic 1" [Rattus norvegicus (taxid:10116)]

 Score = 137 (53.3 bits), Expect = 1.5e-07, P = 1.5e-07
 Identities = 29/82 (35%), Positives = 47/82 (57%)

Query:    13 QAEIDGRQETFKSLKEFGLKV-------SPPREPELTKLDELRRQLASSWEEQRTRLDHA 65
             + EID R  TF++ ++FG ++       SP  + +L  LD+ R  L  +W ++R  LDH 
Sbjct:  1365 RTEIDARAGTFQAFEQFGQQLLAHGHYASPEIKEKLDILDQERTDLEKAWVQRRMMLDHC 1424

Query:    66 HQAQMFKEAADQAENWLVTKEA 87
              + Q+F    +QAENW+  +EA
Sbjct:  1425 LELQLFHRDCEQAENWMAAREA 1446

GO:0005509 "calcium ion binding" evidence=IEA

UNIPROTKB|E1BFB0 SPTAN1 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 130 (50.8 bits), Expect = 8.5e-07, P = 8.5e-07
 Identities = 28/82 (34%), Positives = 46/82 (56%)

Query:    13 QAEIDGRQETFKSLKEFGLKV-------SPPREPELTKLDELRRQLASSWEEQRTRLDHA 65
             + EID R  TF++ ++FG ++       SP  + +L  LD+ R  L  +W ++R  LD  
Sbjct:  1385 RTEIDARAGTFQAFEQFGQQLLAHGHYASPEIKEKLDVLDQERADLEKAWVQRRMMLDQC 1444

Query:    66 HQAQMFKEAADQAENWLVTKEA 87
              + Q+F    +QAENW+  +EA
Sbjct:  1445 LELQLFHRDCEQAENWMAAREA 1466

GO:0046982 "protein heterodimerization activity" evidence=IEA

GO:0043231 "intracellular membrane-bounded organelle" evidence=IEA

GO:0032437 "cuticular plate" evidence=IEA

GO:0030507 "spectrin binding" evidence=IEA

GO:0030018 "Z disc" evidence=IEA

GO:0016328 "lateral plasma membrane" evidence=IEA

GO:0015630 "microtubule cytoskeleton" evidence=IEA

GO:0005916 "fascia adherens" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

UNIPROTKB|F1NHT4 SPTAN1 "Spectrin alpha chain, non-erythrocytic 1" [Gallus gallus (taxid:9031)]

 Score = 129 (50.5 bits), Expect = 1.1e-06, P = 1.1e-06
 Identities = 28/82 (34%), Positives = 46/82 (56%)

Query:    13 QAEIDGRQETFKSLKEFGLKV-------SPPREPELTKLDELRRQLASSWEEQRTRLDHA 65
             + EID R  TF++ ++FG ++       SP  + +L  LD+ R  L  +W ++R  LD  
Sbjct:  1358 RTEIDARAGTFQAFEQFGQQLLARGHYASPEIKEKLDILDQERTDLEKAWVQRRMMLDQC 1417

Query:    66 HQAQMFKEAADQAENWLVTKEA 87
              + Q+F    +QAENW+  +EA
Sbjct:  1418 LELQLFHRDCEQAENWMAAREA 1439

GO:0005509 "calcium ion binding" evidence=IEA

UNIPROTKB|F1NHT3 SPTAN1 "Spectrin alpha chain, non-erythrocytic 1" [Gallus gallus (taxid:9031)]

 Score = 129 (50.5 bits), Expect = 1.1e-06, P = 1.1e-06
 Identities = 28/82 (34%), Positives = 46/82 (56%)

Query:    13 QAEIDGRQETFKSLKEFGLKV-------SPPREPELTKLDELRRQLASSWEEQRTRLDHA 65
             + EID R  TF++ ++FG ++       SP  + +L  LD+ R  L  +W ++R  LD  
Sbjct:  1378 RTEIDARAGTFQAFEQFGQQLLARGHYASPEIKEKLDILDQERTDLEKAWVQRRMMLDQC 1437

Query:    66 HQAQMFKEAADQAENWLVTKEA 87
              + Q+F    +QAENW+  +EA
Sbjct:  1438 LELQLFHRDCEQAENWMAAREA 1459

GO:0005509 "calcium ion binding" evidence=IEA

UNIPROTKB|F1NIU0 SPTAN1 "Spectrin alpha chain, non-erythrocytic 1" [Gallus gallus (taxid:9031)]

 Score = 129 (50.5 bits), Expect = 1.1e-06, P = 1.1e-06
 Identities = 28/82 (34%), Positives = 46/82 (56%)

Query:    13 QAEIDGRQETFKSLKEFGLKV-------SPPREPELTKLDELRRQLASSWEEQRTRLDHA 65
             + EID R  TF++ ++FG ++       SP  + +L  LD+ R  L  +W ++R  LD  
Sbjct:  1378 RTEIDARAGTFQAFEQFGQQLLARGHYASPEIKEKLDILDQERTDLEKAWVQRRMMLDQC 1437

Query:    66 HQAQMFKEAADQAENWLVTKEA 87
              + Q+F    +QAENW+  +EA
Sbjct:  1438 LELQLFHRDCEQAENWMAAREA 1459

GO:0005509 "calcium ion binding" evidence=IEA

UNIPROTKB|Q13813 SPTAN1 "Spectrin alpha chain, non-erythrocytic 1" [Homo sapiens (taxid:9606)]

 Score = 129 (50.5 bits), Expect = 1.1e-06, P = 1.1e-06
 Identities = 28/82 (34%), Positives = 46/82 (56%)

Query:    13 QAEIDGRQETFKSLKEFGLKV-------SPPREPELTKLDELRRQLASSWEEQRTRLDHA 65
             + EID R  TF++ ++FG ++       SP  + +L  LD+ R  L  +W ++R  LD  
Sbjct:  1385 RTEIDARAGTFQAFEQFGQQLLAHGHYASPEIKQKLDILDQERADLEKAWVQRRMMLDQC 1444

Query:    66 HQAQMFKEAADQAENWLVTKEA 87
              + Q+F    +QAENW+  +EA
Sbjct:  1445 LELQLFHRDCEQAENWMAAREA 1466

GO:0005509 "calcium ion binding" evidence=IEA

GO:0003779 "actin binding" evidence=IEA

GO:0005516 "calmodulin binding" evidence=IEA

GO:0051693 "actin filament capping" evidence=IEA

GO:0005916 "fascia adherens" evidence=IEA

GO:0016328 "lateral plasma membrane" evidence=IEA

GO:0030018 "Z disc" evidence=IEA

GO:0030507 "spectrin binding" evidence=IEA

GO:0032437 "cuticular plate" evidence=IEA

GO:0046982 "protein heterodimerization activity" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0005200 "structural constituent of cytoskeleton" evidence=TAS

GO:0016020 "membrane" evidence=TAS

GO:0008091 "spectrin" evidence=TAS

GO:0005829 "cytosol" evidence=TAS

GO:0006915 "apoptotic process" evidence=TAS

GO:0006921 "cellular component disassembly involved in execution phase of apoptosis" evidence=TAS

GO:0007411 "axon guidance" evidence=TAS

GO:0015630 "microtubule cytoskeleton" evidence=IDA

GO:0043231 "intracellular membrane-bounded organelle" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	92
cd00176	213	cd00176, SPEC, Spectrin repeats, found in several	0.001

>gnl|CDD|238103 cd00176, SPEC, Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; the repeats are independent folding units; tandem repeats are found in differing numbers and arrange in an antiparallel manner to form dimers; the repeats are defined by a characteristic tryptophan (W) residue in helix A and a leucine (L) at the carboxyl end of helix C and separated by a linker of 5 residues; two copies of the repeat are present here

 Score = 35.9 bits (83), Expect = 0.001
 Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 7/83 (8%)

Query: 13  QAEIDGRQETFKSLKEFGLKV-------SPPREPELTKLDELRRQLASSWEEQRTRLDHA 65
           +AE+   +E  ++L E G ++       +   +  L +L++   +L    EE+R RL+ A
Sbjct: 46  EAELAAHEERVEALNELGEQLIEEGHPDAEEIQERLEELNQRWEELRELAEERRQRLEEA 105

Query: 66  HQAQMFKEAADQAENWLVTKEAT 88
              Q F   AD  E WL  KEA 
Sbjct: 106 LDLQQFFRDADDLEQWLEEKEAA 128

Length = 213

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	92
KOG0517|consensus	2473		99.78
KOG0040|consensus	2399		99.61
KOG0517|consensus	2473		99.6
KOG0040|consensus	2399		99.6
cd00176	213	SPEC Spectrin repeats, found in several proteins i	99.19
smart00150	101	SPEC Spectrin repeats.	98.85
PF00435	105	Spectrin: Spectrin repeat; InterPro: IPR002017 Spe	98.63
cd00176	213	SPEC Spectrin repeats, found in several proteins i	97.65

>KOG0517|consensus

Probab=99.78  E-value=1.2e-18  Score=144.12  Aligned_cols=90  Identities=24%  Similarity=0.403  Sum_probs=87.2

Q ss_pred             HHHHHHHHHhhHHHHhhchHhHHHHHHHhhhhcCCCCh---H----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHh
Q psy10627          2 INKVYSILFSSQAEIDGRQETFKSLKEFGLKVSPPREP---E----LTKLDELRRQLASSWEEQRTRLDHAHQAQMFKEA   74 (92)
Q Consensus         2 ~e~ll~~Hq~~~~EI~~r~~~~~~l~~~G~~L~~~~h~---e----l~~L~~~~~~l~~~We~R~~~L~q~~~lq~F~rd   74 (92)
                      |+.|+.+|+.+++||++|++.|..|++.|++|+..+||   |    +..|.+++..+.+.|+.|+..|++.++.++|.||
T Consensus      1940 ~ellm~~Hq~lkaEieARe~~f~~c~eLG~~lL~~~hyas~EI~ekl~~L~~~r~e~~~~W~~r~e~Lq~~lev~~F~Rd 2019 (2473)
T KOG0517|consen 1940 VELLMNNHQGLKAEIEAREDNFSACIELGKSLLLRKHYASEEIKEKLRALQDRREELYEKWERRWEWLQQILEVHQFARD 2019 (2473)
T ss_pred             HHHHHHHhHHHHHHHHhccHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            68899999999999999999999999999999999998   2    9999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhchhcccC
Q psy10627         75 ADQAENWLVTKEATEYR   91 (92)
Q Consensus        75 a~q~e~Wl~~qE~~L~~   91 (92)
                      |.++|+|+.+||++|.+
T Consensus      2020 A~~aeawl~aQep~L~S 2036 (2473)
T KOG0517|consen 2020 AKVAEAWLIAQEPYLRS 2036 (2473)
T ss_pred             HHHHHHHHHhchhHhhH
Confidence            99999999999999976

>KOG0040|consensus

Probab=99.61  E-value=1.8e-15  Score=124.36  Aligned_cols=90  Identities=27%  Similarity=0.437  Sum_probs=86.3

Q ss_pred             HHHHHHHHHhhHHHHhhchHhHHHHHHHhhhhcCCCChH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHh
Q psy10627          2 INKVYSILFSSQAEIDGRQETFKSLKEFGLKVSPPREPE-------LTKLDELRRQLASSWEEQRTRLDHAHQAQMFKEA   74 (92)
Q Consensus         2 ~e~ll~~Hq~~~~EI~~r~~~~~~l~~~G~~L~~~~h~e-------l~~L~~~~~~l~~~We~R~~~L~q~~~lq~F~rd   74 (92)
                      ++.+|..|+++|.||++|.++|+.--..|+.|+..+||.       +..+...+..|...|+.|+.++.+|.++|.|+||
T Consensus       396 ~e~lL~~hqEhK~eIds~~dSf~~~~~~gq~l~~~~~~as~ev~ekl~~le~e~~~ll~lwe~r~~~yeqcmd~~lfyrd  475 (2399)
T KOG0040|consen  396 AEALLDRHQEHKGEIDAREDSFKSADESGQKLVEAGHYASDEVREKLEILDNEKSALLELWEERRIQYEQCMDLQLFYRD  475 (2399)
T ss_pred             HHHHHHHHHHHhhhhHHHHHHHhhhccccHHHHHccccccHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence            578999999999999999999999999999999999983       8889999999999999999999999999999999


Q ss_pred             HHHHHHHHHhchhcccC
Q psy10627         75 ADQAENWLVTKEATEYR   91 (92)
Q Consensus        75 a~q~e~Wl~~qE~~L~~   91 (92)
                      ..+++.||+.+++||++
T Consensus       476 teq~d~wmskqeafl~n  492 (2399)
T KOG0040|consen  476 TEQVDTWMSKQEAFLAN  492 (2399)
T ss_pred             HHHHHHHHHHHHHHHHh
Confidence            99999999999999975

>KOG0517|consensus

Probab=99.60  E-value=5.9e-15  Score=122.76  Aligned_cols=91  Identities=29%  Similarity=0.367  Sum_probs=87.3

Q ss_pred             HHHHHHHHHhhHHHHhhchHhHHHHHHHhhhhcCCCChH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHh
Q psy10627          2 INKVYSILFSSQAEIDGRQETFKSLKEFGLKVSPPREPE-------LTKLDELRRQLASSWEEQRTRLDHAHQAQMFKEA   74 (92)
Q Consensus         2 ~e~ll~~Hq~~~~EI~~r~~~~~~l~~~G~~L~~~~h~e-------l~~L~~~~~~l~~~We~R~~~L~q~~~lq~F~rd   74 (92)
                      |..|+++|+.+.+||++|+|.++.+...|+.|+.++||+       +..|+..|+.|..+-+.|...|+.++..|+|+.|
T Consensus      1515 ~q~l~KK~q~Lq~EI~~H~prI~~vl~~gq~Li~~~h~~a~~i~~~~~eLe~aW~eL~~a~e~R~~~L~~a~kaQQY~fD 1594 (2473)
T KOG0517|consen 1515 VQSLHKKNQTLQAEIKGHQPRINDVLERGQSLIDSGHPEAEAIEEKLQELESAWQELKEACELRRQRLDEAVKAQQYYFD 1594 (2473)
T ss_pred             HHHHHHHhHHHHHHHHhcchHHHHHHHHhHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            678999999999999999999999999999999999984       9999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhchhcccCC
Q psy10627         75 ADQAENWLVTKEATEYRP   92 (92)
Q Consensus        75 a~q~e~Wl~~qE~~L~~~   92 (92)
                      |..+|+||+.|++++.++
T Consensus      1595 aaE~EaWm~Eqel~m~se 1612 (2473)
T KOG0517|consen 1595 AAEAEAWMGEQELYMMSE 1612 (2473)
T ss_pred             HHHHHHHHhhhHHHHhhh
Confidence            999999999999998763

>KOG0040|consensus

Probab=99.60  E-value=3.3e-15  Score=122.86  Aligned_cols=90  Identities=27%  Similarity=0.458  Sum_probs=85.9

Q ss_pred             HHHHHHHHHhhHHHHhhchHhHHHHHHHhhhhcCCCCh---H----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHh
Q psy10627          2 INKVYSILFSSQAEIDGRQETFKSLKEFGLKVSPPREP---E----LTKLDELRRQLASSWEEQRTRLDHAHQAQMFKEA   74 (92)
Q Consensus         2 ~e~ll~~Hq~~~~EI~~r~~~~~~l~~~G~~L~~~~h~---e----l~~L~~~~~~l~~~We~R~~~L~q~~~lq~F~rd   74 (92)
                      ++.++.+|+++..+|++|.+.|+.+.++|..|+.++|+   +    +..+...+..+..+|..|+..|++|+++|+|.+|
T Consensus      1309 ~eAllerhqe~rte~daRa~tfqA~eqf~~~ll~~~h~As~eie~kl~~~~l~r~~le~awv~rr~~ldq~lelqLf~~d 1388 (2399)
T KOG0040|consen 1309 AEALLERHQEHRTEIDARAGTFQAFEQFGNELLDSGHYASPEIEKKLQAVKLERDDLEKAWVKRRKILDQCLELQLFQRD 1388 (2399)
T ss_pred             HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccCcCCHHHHHHHHHHHhhccchHHHHHHHHHHHHhhhhHHHHHhh
Confidence            68899999999999999999999999999999999996   2    8889999999999999999999999999999999


Q ss_pred             HHHHHHHHHhchhcccC
Q psy10627         75 ADQAENWLVTKEATEYR   91 (92)
Q Consensus        75 a~q~e~Wl~~qE~~L~~   91 (92)
                      |+++++||+.+|+||+.
T Consensus      1389 ceq~e~~maare~~l~d 1405 (2399)
T KOG0040|consen 1389 CEQAESWMSAREAFLAD 1405 (2399)
T ss_pred             hHHHHHHHHHHHHhhcc
Confidence            99999999999999853

>cd00176 SPEC Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; the repeats are independent folding units; tandem repeats are found in differing numbers and arrange in an antiparallel manner to form dimers; the repeats are defined by a characteristic tryptophan (W) residue in helix A and a leucine (L) at the carboxyl end of helix C and separated by a linker of 5 residues; two copies of the repeat are present here

Probab=99.19  E-value=5.4e-10  Score=74.11  Aligned_cols=89  Identities=29%  Similarity=0.421  Sum_probs=83.6

Q ss_pred             HHHHHHHHHhhHHHHhhchHhHHHHHHHhhhhcCCCChH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHh
Q psy10627          2 INKVYSILFSSQAEIDGRQETFKSLKEFGLKVSPPREPE-------LTKLDELRRQLASSWEEQRTRLDHAHQAQMFKEA   74 (92)
Q Consensus         2 ~e~ll~~Hq~~~~EI~~r~~~~~~l~~~G~~L~~~~h~e-------l~~L~~~~~~l~~~We~R~~~L~q~~~lq~F~rd   74 (92)
                      ++.++++|+.+..+|..+.+.++.+...|+.|+..++++       +..|..+|..|...+..|...|+.+++...|+.+
T Consensus        35 ~~~~l~~~~~~~~e~~~~~~~~~~l~~~~~~L~~~~~~~~~~i~~~~~~l~~~w~~l~~~~~~r~~~L~~~~~~~~~~~~  114 (213)
T cd00176          35 VEALLKKHEALEAELAAHEERVEALNELGEQLIEEGHPDAEEIQERLEELNQRWEELRELAEERRQRLEEALDLQQFFRD  114 (213)
T ss_pred             HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            678999999999999999999999999999999998742       9999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhchhccc
Q psy10627         75 ADQAENWLVTKEATEY   90 (92)
Q Consensus        75 a~q~e~Wl~~qE~~L~   90 (92)
                      +..+..||...+..|.
T Consensus       115 ~~~l~~wl~~~e~~l~  130 (213)
T cd00176         115 ADDLEQWLEEKEAALA  130 (213)
T ss_pred             HHHHHHHHHHHHHHhc
Confidence            9999999999887764

>smart00150 SPEC Spectrin repeats

Probab=98.85  E-value=1.6e-08  Score=60.20  Aligned_cols=61  Identities=25%  Similarity=0.407  Sum_probs=56.7

Q ss_pred             HHHHHHHHHhhHHHHhhchHhHHHHHHHhhhhcCCCChH-------HHHHHHHHHHHHHHHHHHHHHH
Q psy10627          2 INKVYSILFSSQAEIDGRQETFKSLKEFGLKVSPPREPE-------LTKLDELRRQLASSWEEQRTRL   62 (92)
Q Consensus         2 ~e~ll~~Hq~~~~EI~~r~~~~~~l~~~G~~L~~~~h~e-------l~~L~~~~~~l~~~We~R~~~L   62 (92)
                      |+.++++|+.++.||.++.+.++.+...|..|+..++++       +..|..+|..|...+..|+..|
T Consensus        33 ~~~~~~~~~~~~~e~~~~~~~v~~~~~~~~~L~~~~~~~~~~i~~~~~~l~~~w~~l~~~~~~r~~~L  100 (101)
T smart00150       33 VEALLKKHEALEAELEAHEERVEALNELGEQLIEEGHPDAEEIEERLEELNERWEELKELAEERRQKL  100 (101)
T ss_pred             HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            688999999999999999999999999999999998763       8889999999999999998876

>PF00435 Spectrin: Spectrin repeat; InterPro: IPR002017 Spectrin repeats [] are found in several proteins involved in cytoskeletal structure

Probab=98.63  E-value=2.6e-07  Score=55.11  Aligned_cols=63  Identities=25%  Similarity=0.335  Sum_probs=57.4

Q ss_pred             HHHHHHHHHhhHHHHhhchHhHHHHHHHhhhhcCCCChH-------HHHHHHHHHHHHHHHHHHHHHHHH
Q psy10627          2 INKVYSILFSSQAEIDGRQETFKSLKEFGLKVSPPREPE-------LTKLDELRRQLASSWEEQRTRLDH   64 (92)
Q Consensus         2 ~e~ll~~Hq~~~~EI~~r~~~~~~l~~~G~~L~~~~h~e-------l~~L~~~~~~l~~~We~R~~~L~q   64 (92)
                      ++.++.+|+.+..||..+.+.++.+...|..|+..+|++       +..|...|..|...+..|+..|.+
T Consensus        36 ~~~~~~~~~~~~~ei~~~~~~l~~l~~~~~~L~~~~~~~~~~i~~~~~~l~~~w~~l~~~~~~r~~~Lee  105 (105)
T PF00435_consen   36 LEEQLKKHKELQEEIESRQERLESLNEQAQQLIDSGPEDSDEIQEKLEELNQRWEALCELVEERRQKLEE  105 (105)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Confidence            678999999999999999999999999999998887652       889999999999999999998874

These include spectrin alpha and beta subunits [, ], alpha-actinin [] and dystrophin. The spectrin repeat forms a three-helix bundle. The second helix is interrupted by proline in some sequences. The repeats are defined by a characteristic tryptophan (W) residue at position 17 in helix A and a leucine (L) at 2 residues from the carboxyl end of helix C.; GO: 0005515 protein binding; PDB: 1HCI_A 1QUU_A 3FB2_B 1S35_A 1U5P_A 1U4Q_A 1CUN_B 1YDI_B 3EDV_A 1AJ3_A ....

>cd00176 SPEC Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; the repeats are independent folding units; tandem repeats are found in differing numbers and arrange in an antiparallel manner to form dimers; the repeats are defined by a characteristic tryptophan (W) residue in helix A and a leucine (L) at the carboxyl end of helix C and separated by a linker of 5 residues; two copies of the repeat are present here

Probab=97.65  E-value=0.00038  Score=45.86  Aligned_cols=64  Identities=22%  Similarity=0.360  Sum_probs=58.3

Q ss_pred             HHHHHHHHHhhHHHHhhchHhHHHHHHHhhhhcCCCChH--------HHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10627          2 INKVYSILFSSQAEIDGRQETFKSLKEFGLKVSPPREPE--------LTKLDELRRQLASSWEEQRTRLDHA   65 (92)
Q Consensus         2 ~e~ll~~Hq~~~~EI~~r~~~~~~l~~~G~~L~~~~h~e--------l~~L~~~~~~l~~~We~R~~~L~q~   65 (92)
                      ++.++..|+.++.+|.++.+.+..+...|..|+..+++.        +..|...|..|...+..|...|..+
T Consensus       141 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~l~~~~~~l~~~~~~~~~~L~~~  212 (213)
T cd00176         141 VEELLKKHKELEEELEAHEPRLKSLNELAEELLEEGHPDADEEIEEKLEELNERWEELLELAEERQKKLEEA  212 (213)
T ss_pred             HHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            577899999999999999999999999999999998751        8899999999999999999988764

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	92
3fb2_A	218	Crystal Structure Of The Human Brain Alpha Spectrin		2e-07

>pdb|3FB2|A Chain A, Crystal Structure Of The Human Brain Alpha Spectrin Repeats 15 And 16. Northeast Structural Genomics Consortium Target Hr5563a. Length = 218

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 44/80 (55%), Gaps = 7/80 (8%)
Query: 15  EIDGRQETFKSLKEFGLKV-------SPPREPELTKLDELRRQLASSWEEQRTRLDHAHQ 67
           EID R  TF++ ++FG ++       SP  + +L  LD+ R  L  +W ++R  LD   +
Sbjct: 61  EIDARAGTFQAFEQFGQQLLAHGHYASPEIKQKLDILDQERADLEKAWVQRRXXLDQCLE 120
Query: 68  AQMFKEAADQAENWLVTKEA 87
            Q+F    +QAENW   +EA
Sbjct: 121 LQLFHRDCEQAENWXAAREA 140

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	92
1s35_A	214	Beta-I spectrin, spectrin beta chain, erythrocyte;	3e-07
3fb2_A	218	Spectrin alpha chain, brain spectrin; non-erythroi	6e-07
3lbx_B	185	Beta-I spectrin, spectrin beta chain, erythrocyte;	4e-06
1u4q_A	322	Spectrin alpha chain, brain; alpha spectrin, three	7e-06
3pe0_A	283	Plectin; cytoskeleton, plakin, spectrin repeat, SH	1e-04
1cun_A	213	Protein (alpha spectrin); two repeats of spectrin,	2e-04
3kbt_A	326	Beta-I spectrin, spectrin beta chain, erythrocyte;	6e-04

>1s35_A Beta-I spectrin, spectrin beta chain, erythrocyte; two repeats of spectrin, alpha helical linker region, 3- helix coiled-coils, beta spectrin; 2.40A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1 Length = 214

 Score = 44.9 bits (106), Expect = 3e-07
 Identities = 26/84 (30%), Positives = 37/84 (44%), Gaps = 8/84 (9%)

Query: 13  QAEIDGRQETFKSLKEFGLKVSPPREPE--------LTKLDELRRQLASSWEEQRTRLDH 64
           + EIDG Q++++ +KE G KV   +           L  LD     L   WE +   L  
Sbjct: 46  KDEIDGHQDSYQRVKESGEKVIQGQTDPEYLLLGQRLEGLDTGWDALGRMWESRSHTLAQ 105

Query: 65  AHQAQMFKEAADQAENWLVTKEAT 88
               Q F++ A QAE  L  +E T
Sbjct: 106 CLGFQEFQKDAKQAEAILSNQEYT 129

>3fb2_A Spectrin alpha chain, brain spectrin; non-erythroid alpha chain alpha-II spectrin, fordrin alpha chain, sptan1, SPTA2_human, NESG, HR5563A; 2.30A {Homo sapiens} Length = 218

 Score = 44.1 bits (104), Expect = 6e-07
 Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 7/82 (8%)

Query: 13  QAEIDGRQETFKSLKEFGLKVSPPREPE-------LTKLDELRRQLASSWEEQRTRLDHA 65
           + EID R  TF++ ++FG ++              L  LD+ R  L  +W ++R  LD  
Sbjct: 59  RTEIDARAGTFQAFEQFGQQLLAHGHYASPEIKQKLDILDQERADLEKAWVQRRMMLDQC 118

Query: 66  HQAQMFKEAADQAENWLVTKEA 87
            + Q+F    +QAENW+  +EA
Sbjct: 119 LELQLFHRDCEQAENWMAAREA 140

>3lbx_B Beta-I spectrin, spectrin beta chain, erythrocyte; tetramer, complex, three-helix bundle, alpha helix repeat, helical linker, actin capping; 2.80A {Homo sapiens} Length = 185

 Score = 41.8 bits (98), Expect = 4e-06
 Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 7/82 (8%)

Query: 13  QAEIDGRQETFKSLKEFG---LKVSPPREPE----LTKLDELRRQLASSWEEQRTRLDHA 65
            AEI+ R + F +  E G   L+       E    L ++   R+++   WE +  RL   
Sbjct: 50  NAEIETRSKNFSACLELGESLLQRQHQASEEIREKLQQVMSRRKEMNEKWEARWERLRML 109

Query: 66  HQAQMFKEAADQAENWLVTKEA 87
            +   F   A  AE WL+ +E 
Sbjct: 110 LEVCQFSRDASVAEAWLIAQEP 131

>1u4q_A Spectrin alpha chain, brain; alpha spectrin, three repeats of spectrin, alpha-helical linker region, 3-helix coiled-coil, structural protein; 2.50A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 a.7.1.1 Length = 322

 Score = 41.4 bits (97), Expect = 7e-06
 Identities = 13/83 (15%), Positives = 32/83 (38%), Gaps = 7/83 (8%)

Query: 13  QAEIDGRQETFKSLKEFGLKV-------SPPREPELTKLDELRRQLASSWEEQRTRLDHA 65
           +AE+   +   + + + G K+           +  L +  +  ++L      +  RL+ +
Sbjct: 155 EAELAAHEPAIQGVLDTGKKLSDDNTIGKEEIQQRLAQFVDHWKELKQLAAARGQRLEES 214

Query: 66  HQAQMFKEAADQAENWLVTKEAT 88
            + Q F    ++ E W+  K   
Sbjct: 215 LEYQQFVANVEEEEAWINEKMTL 237

>3pe0_A Plectin; cytoskeleton, plakin, spectrin repeat, SH3, structural prote intermediate filament, crosslinking; 2.95A {Homo sapiens} Length = 283

 Score = 38.1 bits (88), Expect = 1e-04
 Identities = 12/83 (14%), Positives = 26/83 (31%), Gaps = 7/83 (8%)

Query: 13  QAEIDGRQETFKSLKEFGLKVSPPREPELTKLDELRRQLASSWEE-------QRTRLDHA 65
             E++ +++  K L+  G ++     P    ++  +  L + W             L   
Sbjct: 54  MRELELKEKKIKELQNAGDRLLREDHPARPTVESFQAALQTQWSWMLQLCCCIEAHLKEN 113

Query: 66  HQAQMFKEAADQAENWLVTKEAT 88
                F     +AE  L   +  
Sbjct: 114 AAYFQFFSDVREAEGQLQKLQEA 136

>1cun_A Protein (alpha spectrin); two repeats of spectrin, alpha helical linker region, 2 tandem 3-helix coiled- coils, structural protein; 2.00A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 PDB: 1aj3_A Length = 213

 Score = 37.2 bits (86), Expect = 2e-04
 Identities = 15/82 (18%), Positives = 33/82 (40%), Gaps = 7/82 (8%)

Query: 13  QAEIDGRQETFKSLKEFGLKVSPPREPE-------LTKLDELRRQLASSWEEQRTRLDHA 65
           +AE+   +   +S+ + G K+S             L +  +  ++L      +  RL+ +
Sbjct: 46  EAELAAHEPAIQSVLDTGKKLSDDNTIGKEEIQQRLAQFVDHWKELKQLAAARGQRLEES 105

Query: 66  HQAQMFKEAADQAENWLVTKEA 87
            + Q F    ++ E W+  K  
Sbjct: 106 LEYQQFVANVEEEEAWINEKMT 127

>3kbt_A Beta-I spectrin, spectrin beta chain, erythrocyte; complex, spectrin, spectrin repeat, three helix bundle, ANKY binding, disease mutation, structural protein, ZU5 sandwich; 2.75A {Homo sapiens} PDB: 3kbu_A Length = 326

 Score = 35.7 bits (82), Expect = 6e-04
 Identities = 16/83 (19%), Positives = 29/83 (34%), Gaps = 7/83 (8%)

Query: 13  QAEIDGRQETFKSLKEFGLKVSPPREPE-------LTKLDELRRQLASSWEEQRTRLDHA 65
           Q  ++      K L      +     PE         ++D+    L    EE++ +L++ 
Sbjct: 50  QRAVEDYGRNIKQLASRAQGLLSAGHPEGEQIIRLQGQVDKHYAGLKDVAEERKRKLENM 109

Query: 66  HQAQMFKEAADQAENWLVTKEAT 88
           +     K   D  E W+  KE  
Sbjct: 110 YHLFQLKRETDDLEQWISEKELV 132

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	92
3lbx_B	185	Beta-I spectrin, spectrin beta chain, erythrocyte;	99.84
3fb2_A	218	Spectrin alpha chain, brain spectrin; non-erythroi	99.81
1s35_A	214	Beta-I spectrin, spectrin beta chain, erythrocyte;	99.79
1cun_A	213	Protein (alpha spectrin); two repeats of spectrin,	99.69
3r6n_A	450	Desmoplakin; spectrin repeat, SH3 domain, cell adh	99.66
1u5p_A	216	Spectrin alpha chain, brain; alpha spectrin, two r	99.64
3pe0_A	283	Plectin; cytoskeleton, plakin, spectrin repeat, SH	99.6
1u4q_A	322	Spectrin alpha chain, brain; alpha spectrin, three	99.58
1quu_A	250	Human skeletal muscle alpha-actinin 2; triple-heli	99.58
3edu_A	218	Beta-I spectrin, spectrin beta chain, erythrocyte;	99.55
3kbt_A	326	Beta-I spectrin, spectrin beta chain, erythrocyte;	99.54
1u4q_A	322	Spectrin alpha chain, brain; alpha spectrin, three	99.45
3edv_A	323	Spectrin beta chain, brain 1; spectrin repeat, coi	99.44
3pdy_A	210	Plectin; cytoskeleton, plakin, intermediate filame	99.32
3kbt_A	326	Beta-I spectrin, spectrin beta chain, erythrocyte;	99.31
1hci_A	476	Alpha-actinin 2; triple-helix coiled coil, contrac	99.26
1sjj_A	863	Actinin; 3-helix bundle, calponin homology domain,	99.22
2iak_A	224	Bullous pemphigoid antigen 1, isoform 5; triple he	99.2
3edv_A	323	Spectrin beta chain, brain 1; spectrin repeat, coi	99.2
1hci_A	476	Alpha-actinin 2; triple-helix coiled coil, contrac	99.15
3uun_A	119	Dystrophin; triple helical, cell structure and sta	99.05
3uul_A	118	Utrophin; spectrin repeat, structural protein, cyt	99.02
3lbx_A	161	Spectrin alpha chain, erythrocyte; tetramer, compl	98.96
2spc_A	107	Spectrin; cytoskeleton; 1.80A {Drosophila melanoga	98.9
1sjj_A	863	Actinin; 3-helix bundle, calponin homology domain,	98.85
3lbx_A	161	Spectrin alpha chain, erythrocyte; tetramer, compl	98.83
3f31_A	149	Spectrin alpha chain, brain; LONE helix followed b	98.81
1u5p_A	216	Spectrin alpha chain, brain; alpha spectrin, two r	98.79
3r6n_A	450	Desmoplakin; spectrin repeat, SH3 domain, cell adh	98.78
1s35_A	214	Beta-I spectrin, spectrin beta chain, erythrocyte;	98.75
2iak_A	224	Bullous pemphigoid antigen 1, isoform 5; triple he	98.62
1cun_A	213	Protein (alpha spectrin); two repeats of spectrin,	98.62
3f31_A	149	Spectrin alpha chain, brain; LONE helix followed b	98.58
3pdy_A	210	Plectin; cytoskeleton, plakin, intermediate filame	98.27
3edu_A	218	Beta-I spectrin, spectrin beta chain, erythrocyte;	97.98
3fb2_A	218	Spectrin alpha chain, brain spectrin; non-erythroi	97.95
1g8x_A	1010	Myosin II heavy chain fused to alpha-actinin 3; mo	97.76
1quu_A	250	Human skeletal muscle alpha-actinin 2; triple-heli	97.58
2ycu_A	995	Non muscle myosin 2C, alpha-actinin; motor protein	97.44
1g8x_A	1010	Myosin II heavy chain fused to alpha-actinin 3; mo	97.36
2ycu_A	995	Non muscle myosin 2C, alpha-actinin; motor protein	96.53
1wlx_A	129	Alpha-actinin 4; three-helix bundle, protein bindi	95.79
2odv_A	235	Plectin 1, HD1; plakin domain, spectrin repeat, cy	95.39
2odv_A	235	Plectin 1, HD1; plakin domain, spectrin repeat, cy	94.9
3pe0_A	283	Plectin; cytoskeleton, plakin, spectrin repeat, SH	92.7
3lbx_B	185	Beta-I spectrin, spectrin beta chain, erythrocyte;	88.25

>3lbx_B Beta-I spectrin, spectrin beta chain, erythrocyte; tetramer, complex, three-helix bundle, alpha helix repeat, helical linker, actin capping; 2.80A {Homo sapiens}

Probab=99.84  E-value=1.2e-20  Score=125.76  Aligned_cols=90  Identities=22%  Similarity=0.368  Sum_probs=86.1

Q ss_pred             HHHHHHHHHhhHHHHhhchHhHHHHHHHhhhhcCCCChH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHh
Q psy10627          2 INKVYSILFSSQAEIDGRQETFKSLKEFGLKVSPPREPE-------LTKLDELRRQLASSWEEQRTRLDHAHQAQMFKEA   74 (92)
Q Consensus         2 ~e~ll~~Hq~~~~EI~~r~~~~~~l~~~G~~L~~~~h~e-------l~~L~~~~~~l~~~We~R~~~L~q~~~lq~F~rd   74 (92)
                      |+.+|++|++++.||++|.++|..+...|+.|+..+||.       +..|...|..|...|..|+..|.+|++++.|.+|
T Consensus        39 ~e~ll~~H~~~~~ei~~~~~~~~~l~~~G~~L~~~~~~~~~~i~~~l~~L~~~w~~L~~~w~~r~~~L~~~l~l~~F~~d  118 (185)
T 3lbx_B           39 VELLMKYHQGINAEIETRSKNFSACLELGESLLQRQHQASEEIREKLQQVMSRRKEMNEKWEARWERLRMLLEVCQFSRD  118 (185)
T ss_dssp             SCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            578999999999999999999999999999999999973       9999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhchhcccC
Q psy10627         75 ADQAENWLVTKEATEYR   91 (92)
Q Consensus        75 a~q~e~Wl~~qE~~L~~   91 (92)
                      |+++++||.++|++|++
T Consensus       119 ~~~~~~Wl~~~e~~L~~  135 (185)
T 3lbx_B          119 ASVAEAWLIAQEPYLAS  135 (185)
T ss_dssp             HHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHhHhhhcc
Confidence            99999999999998864

>3fb2_A Spectrin alpha chain, brain spectrin; non-erythroid alpha chain alpha-II spectrin, fordrin alpha chain, sptan1, SPTA2_human, NESG, HR5563A; 2.30A {Homo sapiens}

Probab=99.81  E-value=3.5e-19  Score=120.73  Aligned_cols=90  Identities=29%  Similarity=0.499  Sum_probs=85.3

Q ss_pred             HHHHHHHHHhhHHHHhhchHhHHHHHHHhhhhcCCCChH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHh
Q psy10627          2 INKVYSILFSSQAEIDGRQETFKSLKEFGLKVSPPREPE-------LTKLDELRRQLASSWEEQRTRLDHAHQAQMFKEA   74 (92)
Q Consensus         2 ~e~ll~~Hq~~~~EI~~r~~~~~~l~~~G~~L~~~~h~e-------l~~L~~~~~~l~~~We~R~~~L~q~~~lq~F~rd   74 (92)
                      |+.+|++|++++.||+++.+.|+.+...|+.|+..+||.       +..|...|..|...|..|+..|.+|++++.|.+|
T Consensus        48 ve~ll~~H~~l~~ei~~~~~~~~~~~~~G~~Ll~~~~~~~~~i~~~l~~L~~~w~~L~~~~~~R~~~L~q~l~l~~F~~d  127 (218)
T 3fb2_A           48 AEALLERHQEHRTEIDARAGTFQAFEQFGQQLLAHGHYASPEIKQKLDILDQERADLEKAWVQRRMMLDQCLELQLFHRD  127 (218)
T ss_dssp             HHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            688999999999999999999999999999999999873       8999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhchhcccC
Q psy10627         75 ADQAENWLVTKEATEYR   91 (92)
Q Consensus        75 a~q~e~Wl~~qE~~L~~   91 (92)
                      ++++++||..+|.+|++
T Consensus       128 ~~~~~~WL~~~e~~L~~  144 (218)
T 3fb2_A          128 CEQAENWMAAREAFLNT  144 (218)
T ss_dssp             HHHHHHHHHHHHHCC--
T ss_pred             HHHHHHHHHHHHHhhcC
Confidence            99999999999999865

>1s35_A Beta-I spectrin, spectrin beta chain, erythrocyte; two repeats of spectrin, alpha helical linker region, 3- helix coiled-coils, beta spectrin; 2.40A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1

Probab=99.79  E-value=8e-19  Score=117.96  Aligned_cols=90  Identities=31%  Similarity=0.395  Sum_probs=84.9

Q ss_pred             HHHHHHHHHhhHHHHhhchHhHHHHHHHhhhhcCCCC-hH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHH
Q psy10627          2 INKVYSILFSSQAEIDGRQETFKSLKEFGLKVSPPRE-PE-------LTKLDELRRQLASSWEEQRTRLDHAHQAQMFKE   73 (92)
Q Consensus         2 ~e~ll~~Hq~~~~EI~~r~~~~~~l~~~G~~L~~~~h-~e-------l~~L~~~~~~l~~~We~R~~~L~q~~~lq~F~r   73 (92)
                      |+.+|++|+.++.||+++++.|..+...|+.|+..++ |+       +..|...|..|...|..|+..|.+|++++.|.+
T Consensus        35 v~~ll~~h~~~~~ei~~~~~~~~~~~~~g~~L~~~~~~~~~~~i~~~l~~L~~~w~~L~~~~~~r~~~L~~~l~l~~F~~  114 (214)
T 1s35_A           35 AEQLLQQHAGIKDEIDGHQDSYQRVKESGEKVIQGQTDPEYLLLGQRLEGLDTGWDALGRMWESRSHTLAQCLGFQEFQK  114 (214)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            6899999999999999999999999999999999864 32       999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHhchhcccC
Q psy10627         74 AADQAENWLVTKEATEYR   91 (92)
Q Consensus        74 da~q~e~Wl~~qE~~L~~   91 (92)
                      ||+++++||..+|++|++
T Consensus       115 ~~~~~~~Wl~~~E~~l~~  132 (214)
T 1s35_A          115 DAKQAEAILSNQEYTLAH  132 (214)
T ss_dssp             HHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHhc
Confidence            999999999999998864

>1cun_A Protein (alpha spectrin); two repeats of spectrin, alpha helical linker region, 2 tandem 3-helix coiled- coils, structural protein; 2.00A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 PDB: 1aj3_A

Probab=99.69  E-value=2.9e-16  Score=105.05  Aligned_cols=90  Identities=17%  Similarity=0.237  Sum_probs=85.9

Q ss_pred             HHHHHHHHHhhHHHHhhchHhHHHHHHHhhhhcCCCChH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHh
Q psy10627          2 INKVYSILFSSQAEIDGRQETFKSLKEFGLKVSPPREPE-------LTKLDELRRQLASSWEEQRTRLDHAHQAQMFKEA   74 (92)
Q Consensus         2 ~e~ll~~Hq~~~~EI~~r~~~~~~l~~~G~~L~~~~h~e-------l~~L~~~~~~l~~~We~R~~~L~q~~~lq~F~rd   74 (92)
                      |+.++++|+.+..||.++.+.++.+...|+.|+..+||+       +..|...|..|...|..|+..|.+++.++.|.+|
T Consensus        35 v~~ll~kh~~~~~ei~~~~~~v~~v~~~g~~L~~~~~~~~~~i~~~~~~l~~~w~~L~~~~~~R~~~Le~~~~~~~f~~~  114 (213)
T 1cun_A           35 VQNLRKKHKRLEAELAAHEPAIQSVLDTGKKLSDDNTIGKEEIQQRLAQFVDHWKELKQLAAARGQRLEESLEYQQFVAN  114 (213)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            688999999999999999999999999999999999983       8889999999999999999999999999999999


Q ss_pred             HHHHHHHHHhchhcccC
Q psy10627         75 ADQAENWLVTKEATEYR   91 (92)
Q Consensus        75 a~q~e~Wl~~qE~~L~~   91 (92)
                      |+.+++||..++.++.+
T Consensus       115 ~~e~~~Wl~~~e~~l~~  131 (213)
T 1cun_A          115 VEEEEAWINEKMTLVAS  131 (213)
T ss_dssp             HHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHHHhhC
Confidence            99999999999988765

>3r6n_A Desmoplakin; spectrin repeat, SH3 domain, cell adhesion, desmosome; 2.95A {Homo sapiens}

Probab=99.66  E-value=2.7e-16  Score=117.69  Aligned_cols=90  Identities=12%  Similarity=0.122  Sum_probs=85.2

Q ss_pred             HHHHHHHHHhhHHHHhhchHhHHHHHHHhhhhcCCCChH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHh
Q psy10627          2 INKVYSILFSSQAEIDGRQETFKSLKEFGLKVSPPREPE-------LTKLDELRRQLASSWEEQRTRLDHAHQAQMFKEA   74 (92)
Q Consensus         2 ~e~ll~~Hq~~~~EI~~r~~~~~~l~~~G~~L~~~~h~e-------l~~L~~~~~~l~~~We~R~~~L~q~~~lq~F~rd   74 (92)
                      |..++++|+.+++||++|++.|+.+...|+.|+..+||.       +..|...|+.|.+.+..|+..|..+.++|+|++|
T Consensus       128 v~~l~~khq~l~~EL~~~e~~i~~v~~~G~~Li~~~Hpas~~I~~r~~~L~~~W~~L~~l~~~R~~~L~~a~~~~QF~~D  207 (450)
T 3r6n_A          128 IAQKQEAFSIRMSQLEVKEKELNKLKQESDQLVLNQHPASDKIEAYMDTLQTQWSWILQITKCIDVHLKENAAYFQFFEE  207 (450)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHchHHHHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence            457899999999999999999999999999999999982       8999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhchhcccC
Q psy10627         75 ADQAENWLVTKEATEYR   91 (92)
Q Consensus        75 a~q~e~Wl~~qE~~L~~   91 (92)
                      |+.+++||..++++|.+
T Consensus       208 a~EaesWL~eke~~l~s  224 (450)
T 3r6n_A          208 AQSTEAYLKGLQDSIRK  224 (450)
T ss_dssp             HHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcc
Confidence            99999999999988753

>1u5p_A Spectrin alpha chain, brain; alpha spectrin, two repeats of spectrin, alpha-helical linker region, 3-helix coiled coil, structural protein; 2.00A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1

Probab=99.64  E-value=2.6e-15  Score=100.88  Aligned_cols=90  Identities=16%  Similarity=0.257  Sum_probs=85.3

Q ss_pred             HHHHHHHHHhhHHHHhhchHhHHHHHHHhhhhcCCCChH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHh
Q psy10627          2 INKVYSILFSSQAEIDGRQETFKSLKEFGLKVSPPREPE-------LTKLDELRRQLASSWEEQRTRLDHAHQAQMFKEA   74 (92)
Q Consensus         2 ~e~ll~~Hq~~~~EI~~r~~~~~~l~~~G~~L~~~~h~e-------l~~L~~~~~~l~~~We~R~~~L~q~~~lq~F~rd   74 (92)
                      |+.+|++|+.+..+|.++.+.+..+...|..|+..+|++       +..|..+|..|...|..|+..|.+++.++.|.+|
T Consensus        38 v~~ll~kh~~le~~i~~~~~~v~~l~~~~~~L~~~~~~~~~~i~~~~~~l~~~w~~L~~~~~~R~~~Le~~~~l~qf~~~  117 (216)
T 1u5p_A           38 VNNLLKKHQLLEADISAHEDRLKDLNSQADSLMTSSAFDTSQVKDKRETINGRFQRIKSMAAARRAKLNESHRLHQFFRD  117 (216)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSSCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            688999999999999999999999999999999998873       8889999999999999999999999999999999


Q ss_pred             HHHHHHHHHhchhcccC
Q psy10627         75 ADQAENWLVTKEATEYR   91 (92)
Q Consensus        75 a~q~e~Wl~~qE~~L~~   91 (92)
                      ++.+++||..+++.+++
T Consensus       118 ~~~~~~Wl~e~e~~~~~  134 (216)
T 1u5p_A          118 MDDEESWIKEKKLLVSS  134 (216)
T ss_dssp             HHHHHHHHHHHHHHHTC
T ss_pred             HHHHHhHHHHHHHHhcC
Confidence            99999999999987754

>3pe0_A Plectin; cytoskeleton, plakin, spectrin repeat, SH3, structural prote intermediate filament, crosslinking; 2.95A {Homo sapiens}

Probab=99.60  E-value=4.5e-15  Score=105.18  Aligned_cols=88  Identities=13%  Similarity=0.070  Sum_probs=80.9

Q ss_pred             HHHHHHHHHhhHHHHhhchHhHHHHHHHhhhhcCCCChH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHh
Q psy10627          2 INKVYSILFSSQAEIDGRQETFKSLKEFGLKVSPPREPE-------LTKLDELRRQLASSWEEQRTRLDHAHQAQMFKEA   74 (92)
Q Consensus         2 ~e~ll~~Hq~~~~EI~~r~~~~~~l~~~G~~L~~~~h~e-------l~~L~~~~~~l~~~We~R~~~L~q~~~lq~F~rd   74 (92)
                      +..++++|+.+.+||.+|++.++.+...|+.|+..+||.       +..|...|+.|.+.+..|+..|..+.++|+|++|
T Consensus        43 l~~~~~kh~~le~El~a~e~~v~~v~~~g~~L~~~~hp~~~~I~~r~~~L~~~W~~L~~l~~~R~~~L~~a~~~~qF~~d  122 (283)
T 3pe0_A           43 MTAKKESYSALMRELELKEKKIKELQNAGDRLLREDHPARPTVESFQAALQTQWSWMLQLCCCIEAHLKENAAYFQFFSD  122 (283)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            456778899999999999999999999999999999983       8889999999999999999999999999999999


Q ss_pred             HHHHHHHHH---hchhcc
Q psy10627         75 ADQAENWLV---TKEATE   89 (92)
Q Consensus        75 a~q~e~Wl~---~qE~~L   89 (92)
                      |+.+++||.   .++..+
T Consensus       123 a~e~e~Wl~~~~e~~~~~  140 (283)
T 3pe0_A          123 VREAEGQLQKLQEALRRK  140 (283)
T ss_dssp             HHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHh
Confidence            999999987   665544

>1u4q_A Spectrin alpha chain, brain; alpha spectrin, three repeats of spectrin, alpha-helical linker region, 3-helix coiled-coil, structural protein; 2.50A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 a.7.1.1

Probab=99.58  E-value=1.3e-14  Score=101.99  Aligned_cols=90  Identities=16%  Similarity=0.230  Sum_probs=85.6

Q ss_pred             HHHHHHHHHhhHHHHhhchHhHHHHHHHhhhhcCCCChH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHh
Q psy10627          2 INKVYSILFSSQAEIDGRQETFKSLKEFGLKVSPPREPE-------LTKLDELRRQLASSWEEQRTRLDHAHQAQMFKEA   74 (92)
Q Consensus         2 ~e~ll~~Hq~~~~EI~~r~~~~~~l~~~G~~L~~~~h~e-------l~~L~~~~~~l~~~We~R~~~L~q~~~lq~F~rd   74 (92)
                      |+.++++|+.++.||.++.+.+..+...|+.|+..+||+       +..|...|..|...|..|+..|.+++.++.|..|
T Consensus       144 v~~ll~~h~~l~~el~~~~~~i~~l~~~g~~L~~~~~~~~~~i~~~l~~L~~~w~~L~~~~~~R~~~L~~~~~~~qf~~~  223 (322)
T 1u4q_A          144 VQNLRKKHKRLEAELAAHEPAIQGVLDTGKKLSDDNTIGKEEIQQRLAQFVDHWKELKQLAAARGQRLEESLEYQQFVAN  223 (322)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            678999999999999999999999999999999999873       8889999999999999999999999999999999


Q ss_pred             HHHHHHHHHhchhcccC
Q psy10627         75 ADQAENWLVTKEATEYR   91 (92)
Q Consensus        75 a~q~e~Wl~~qE~~L~~   91 (92)
                      ++.+++||..++.+|.+
T Consensus       224 ~~~~~~Wl~~~e~~l~~  240 (322)
T 1u4q_A          224 VEEEEAWINEKMTLVAS  240 (322)
T ss_dssp             HHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHHHhcC
Confidence            99999999999988764

>1quu_A Human skeletal muscle alpha-actinin 2; triple-helix coiled coil, contractIle protein; 2.50A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1

Probab=99.58  E-value=2.4e-14  Score=98.66  Aligned_cols=90  Identities=10%  Similarity=0.171  Sum_probs=85.7

Q ss_pred             HHHHHHHHHhhHHHHhhchHhHHHHHHHhhhhcCCCChH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----
Q psy10627          2 INKVYSILFSSQAEIDGRQETFKSLKEFGLKVSPPREPE-------LTKLDELRRQLASSWEEQRTRLDHAHQAQ-----   69 (92)
Q Consensus         2 ~e~ll~~Hq~~~~EI~~r~~~~~~l~~~G~~L~~~~h~e-------l~~L~~~~~~l~~~We~R~~~L~q~~~lq-----   69 (92)
                      |+.++++|+.+..+|.++.+.++.+...|+.|+..+||+       +..|...|..|...+..|+..|..++.++     
T Consensus        50 v~~llkkh~~~~~el~~~~~~v~~l~~~~~~L~~~~~~~~~~I~~r~~~l~~~W~~L~~~~~~R~~~L~~~l~~~~~~d~  129 (250)
T 1quu_A           50 VRALLRKHEAFESDLAAHQDRVEQIAAIAQELNELDYHDAVNVNDRCQKICDQWDRLGTLTQKRREALERMEKLLETIDQ  129 (250)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            789999999999999999999999999999999999983       88899999999999999999999999999     


Q ss_pred             ---hhHHhHHHHHHHHHhchhcccC
Q psy10627         70 ---MFKEAADQAENWLVTKEATEYR   91 (92)
Q Consensus        70 ---~F~rda~q~e~Wl~~qE~~L~~   91 (92)
                         .|.++|+.+++||..+++.|.+
T Consensus       130 l~~qF~~~a~~~~~Wl~~~e~~l~~  154 (250)
T 1quu_A          130 LHLEFAKRAAPFNNWMEGAMEDLQD  154 (250)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTTC
T ss_pred             HHHHHHHHhHHHHHHHHHHHHHhcc
Confidence               9999999999999999988865

>3edu_A Beta-I spectrin, spectrin beta chain, erythrocyte; ankyrin, ankyrin-binding domain, actin capping, AC binding, cytoskeleton, disease mutation; 2.10A {Homo sapiens} PDB: 3f57_A

Probab=99.55  E-value=6.1e-14  Score=94.82  Aligned_cols=89  Identities=11%  Similarity=0.065  Sum_probs=84.3

Q ss_pred             HHHHHHHHHhhHHHHhh-chHhHHHHHHHhhhhcCCCChH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHH
Q psy10627          2 INKVYSILFSSQAEIDG-RQETFKSLKEFGLKVSPPREPE-------LTKLDELRRQLASSWEEQRTRLDHAHQAQMFKE   73 (92)
Q Consensus         2 ~e~ll~~Hq~~~~EI~~-r~~~~~~l~~~G~~L~~~~h~e-------l~~L~~~~~~l~~~We~R~~~L~q~~~lq~F~r   73 (92)
                      |+.++++|..+..|+.+ +.+++..+...|..|+..+||+       +..|..+|..|......|+..|..+++++.|.+
T Consensus        36 v~~l~~k~~~f~~el~~~~~~~v~~v~~~~~~L~~~~~~~~~~i~~~~~~l~~~W~~L~~~~~~R~~~L~~a~~~~~F~~  115 (218)
T 3edu_A           36 VTLLRDKFRDFARETGAIGQERVDNVNAFIERLIDAGHSEAATIAEWKDGLNEMWADLLELIDTRMQLLAASYDLHRYFY  115 (218)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            67899999999999999 8999999999999999999984       888999999999999999999999999999999


Q ss_pred             hHHHHHHHHHhchhccc
Q psy10627         74 AADQAENWLVTKEATEY   90 (92)
Q Consensus        74 da~q~e~Wl~~qE~~L~   90 (92)
                      ||+.+.+||..++..|+
T Consensus       116 ~~~e~~~Wl~ek~~~l~  132 (218)
T 3edu_A          116 TGAEILGLIDEKHRELP  132 (218)
T ss_dssp             HHHHHHHHHHHHHHCCC
T ss_pred             HHHHHHHHHHHHHhhCC
Confidence            99999999999998874

>3kbt_A Beta-I spectrin, spectrin beta chain, erythrocyte; complex, spectrin, spectrin repeat, three helix bundle, ANKY binding, disease mutation, structural protein, ZU5 sandwich; 2.75A {Homo sapiens} PDB: 3kbu_A

Probab=99.54  E-value=5.7e-14  Score=99.04  Aligned_cols=90  Identities=18%  Similarity=0.240  Sum_probs=85.1

Q ss_pred             HHHHHHHHHhhHHHHhhchHhHHHHHHHhhhhcCCCChH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHh
Q psy10627          2 INKVYSILFSSQAEIDGRQETFKSLKEFGLKVSPPREPE-------LTKLDELRRQLASSWEEQRTRLDHAHQAQMFKEA   74 (92)
Q Consensus         2 ~e~ll~~Hq~~~~EI~~r~~~~~~l~~~G~~L~~~~h~e-------l~~L~~~~~~l~~~We~R~~~L~q~~~lq~F~rd   74 (92)
                      |+.++++|+.++.||+++.+.++.+...|+.|+..+||+       +..|...|..|...|..|+..|.+++.++.|.++
T Consensus        39 ~~~ll~kh~~~~~el~~~~~~v~~l~~~~~~L~~~~~~~~~~i~~~l~~l~~~w~~L~~~~~~R~~~Le~~l~l~~f~~~  118 (326)
T 3kbt_A           39 AIVMLKRHLRQQRAVEDYGRNIKQLASRAQGLLSAGHPEGEQIIRLQGQVDKHYAGLKDVAEERKRKLENMYHLFQLKRE  118 (326)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            678999999999999999999999999999999998873       8899999999999999999999999999999999


Q ss_pred             HHHHHHHHHhchhcccC
Q psy10627         75 ADQAENWLVTKEATEYR   91 (92)
Q Consensus        75 a~q~e~Wl~~qE~~L~~   91 (92)
                      ++.+..||..++.++.+
T Consensus       119 ~~~l~~Wl~~~e~~l~~  135 (326)
T 3kbt_A          119 TDDLEQWISEKELVASS  135 (326)
T ss_dssp             HHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHcc
Confidence            99999999999887643

>1u4q_A Spectrin alpha chain, brain; alpha spectrin, three repeats of spectrin, alpha-helical linker region, 3-helix coiled-coil, structural protein; 2.50A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 a.7.1.1

Probab=99.45  E-value=1.1e-12  Score=92.10  Aligned_cols=90  Identities=16%  Similarity=0.257  Sum_probs=84.6

Q ss_pred             HHHHHHHHHhhHHHHhhchHhHHHHHHHhhhhcCCCChH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHh
Q psy10627          2 INKVYSILFSSQAEIDGRQETFKSLKEFGLKVSPPREPE-------LTKLDELRRQLASSWEEQRTRLDHAHQAQMFKEA   74 (92)
Q Consensus         2 ~e~ll~~Hq~~~~EI~~r~~~~~~l~~~G~~L~~~~h~e-------l~~L~~~~~~l~~~We~R~~~L~q~~~lq~F~rd   74 (92)
                      |+.++++|+.+..+|.++.+.+..+...|..|+..+|++       +..|..+|..|...+..|+..|..++.++.|.+|
T Consensus        38 v~~ll~kh~~le~~i~~~~~~v~~l~~~a~~l~~~~~~~~~~i~~~~~~l~~~w~~L~~~~~~R~~~Le~~~~l~~f~~~  117 (322)
T 1u4q_A           38 VNNLLKKHQLLEADISAHEDRLKDLNSQADSLMTSSAFDTSQVKDKRETINGRFQRIKSMAAARRAKLNESHRLHQFFRD  117 (322)
T ss_dssp             HHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCSSCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            688999999999999999999999999999999988763       7889999999999999999999999999999999


Q ss_pred             HHHHHHHHHhchhcccC
Q psy10627         75 ADQAENWLVTKEATEYR   91 (92)
Q Consensus        75 a~q~e~Wl~~qE~~L~~   91 (92)
                      ++.+.+||..++..+.+
T Consensus       118 ~~~~~~Wl~e~e~~~~~  134 (322)
T 1u4q_A          118 MDDEESWIKEKKLLVSS  134 (322)
T ss_dssp             HHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHHhccC
Confidence            99999999999887754

>3edv_A Spectrin beta chain, brain 1; spectrin repeat, coiled coil, actin capping, actin-binding, alternative splicing, calmodulin-binding, cytoplasm; 1.95A {Homo sapiens}

Probab=99.44  E-value=1.2e-12  Score=92.17  Aligned_cols=89  Identities=10%  Similarity=0.074  Sum_probs=84.0

Q ss_pred             HHHHHHHHHhhHHHHhh-chHhHHHHHHHhhhhcCCCChH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHH
Q psy10627          2 INKVYSILFSSQAEIDG-RQETFKSLKEFGLKVSPPREPE-------LTKLDELRRQLASSWEEQRTRLDHAHQAQMFKE   73 (92)
Q Consensus         2 ~e~ll~~Hq~~~~EI~~-r~~~~~~l~~~G~~L~~~~h~e-------l~~L~~~~~~l~~~We~R~~~L~q~~~lq~F~r   73 (92)
                      |+.++++|..+..||.+ +.+++..+...|..|+..+||+       +..|..+|..|...+..|+..|..++.++.|.+
T Consensus        41 v~~l~~~~~~f~~el~~~~~~~v~~v~~~~~~L~~~~~~~~~~i~~~~~~l~~~W~~L~~~~~~R~~~L~~a~~~~~f~~  120 (323)
T 3edv_A           41 VTMLQERFREFARDTGNIGQERVDTVNHLADELINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQILAASYELHKFYH  120 (323)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            67899999999999998 7999999999999999999984       788999999999999999999999999999999


Q ss_pred             hHHHHHHHHHhchhccc
Q psy10627         74 AADQAENWLVTKEATEY   90 (92)
Q Consensus        74 da~q~e~Wl~~qE~~L~   90 (92)
                      ||+.+.+||..++..|.
T Consensus       121 ~~~e~~~Wl~~k~~~l~  137 (323)
T 3edv_A          121 DAKEIFGRIQDKHKKLP  137 (323)
T ss_dssp             HHHHHHHHHHHHHHTCC
T ss_pred             HHHHHHHHHHHHHhhcc
Confidence            99999999999988774

>3pdy_A Plectin; cytoskeleton, plakin, intermediate filament, spectrin repeat structural protein, crosslinking; 2.22A {Homo sapiens}

Probab=99.32  E-value=5.6e-12  Score=85.31  Aligned_cols=86  Identities=20%  Similarity=0.212  Sum_probs=78.2

Q ss_pred             HHHHHHHHHhhHHHHhhchHhHHHHHHHhhhhcCCCChH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHH
Q psy10627          2 INKVYSILFSSQAEIDGRQETFKSLKEFGLKVSPPREPE----LTKLDELRRQLASSWEEQRTRLDHAHQAQMFKEAADQ   77 (92)
Q Consensus         2 ~e~ll~~Hq~~~~EI~~r~~~~~~l~~~G~~L~~~~h~e----l~~L~~~~~~l~~~We~R~~~L~q~~~lq~F~rda~q   77 (92)
                      |+.++++|+.+..||.++.+.++.+...|..+...+++.    +..|...|..|......|+..|.   .++.|.++|..
T Consensus        40 ve~llkkH~~le~ei~~~~~~v~~l~~~a~~l~~~~~~~i~~rl~~l~~~~~~L~~~a~~R~~~L~---~L~~f~~~~~~  116 (210)
T 3pdy_A           40 VEAQLGSHRGLHQSIEEFRAKIERARSDEGQLSPATRGAYRDCLGRLDLQYAKLLNSSKARLRSLE---SLHSFVAAATK  116 (210)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHH
Confidence            789999999999999999999999999999887554432    88999999999999999999999   78999999999


Q ss_pred             HHHHHHhchhccc
Q psy10627         78 AENWLVTKEATEY   90 (92)
Q Consensus        78 ~e~Wl~~qE~~L~   90 (92)
                      +++||+.+|..+.
T Consensus       117 ~~~Wl~eke~~~~  129 (210)
T 3pdy_A          117 ELMWLNEKEEEEV  129 (210)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH
Confidence            9999999998764

>3kbt_A Beta-I spectrin, spectrin beta chain, erythrocyte; complex, spectrin, spectrin repeat, three helix bundle, ANKY binding, disease mutation, structural protein, ZU5 sandwich; 2.75A {Homo sapiens} PDB: 3kbu_A

Probab=99.31  E-value=1.5e-11  Score=86.59  Aligned_cols=89  Identities=11%  Similarity=0.065  Sum_probs=82.2

Q ss_pred             HHHHHHHHHhhHHHHhh-chHhHHHHHHHhhhhcCCCChH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHH
Q psy10627          2 INKVYSILFSSQAEIDG-RQETFKSLKEFGLKVSPPREPE-------LTKLDELRRQLASSWEEQRTRLDHAHQAQMFKE   73 (92)
Q Consensus         2 ~e~ll~~Hq~~~~EI~~-r~~~~~~l~~~G~~L~~~~h~e-------l~~L~~~~~~l~~~We~R~~~L~q~~~lq~F~r   73 (92)
                      |+.++++|..+..+|.+ +.+.+..+...|..|+..+||+       +..|..+|..|......|+..|..++.++.|.+
T Consensus       145 v~~l~~~~~~f~~el~~~~~~~v~~l~~~~~~L~~~~~~~~~~i~~~~~~l~~~W~~l~~~~~~r~~~L~~a~~~~~f~~  224 (326)
T 3kbt_A          145 VTLLRDKFRDFARETGAIGQERVDNVNAFIERLIDAGHSEAATIAEWKDGLNEMWADLLELIDTRMQLLAASYDLHRYFY  224 (326)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            57899999999999998 8999999999999999999983       888999999999999999999999999999999


Q ss_pred             hHHHHHHHHHhchhccc
Q psy10627         74 AADQAENWLVTKEATEY   90 (92)
Q Consensus        74 da~q~e~Wl~~qE~~L~   90 (92)
                      |++.+.+||..++..|.
T Consensus       225 ~~~e~~~Wl~ek~~~L~  241 (326)
T 3kbt_A          225 TGAEILGLIDEKHRELP  241 (326)
T ss_dssp             HHHHHHHHHHHHHHC--
T ss_pred             HHHHHHHHHHHHHhhCc
Confidence            99999999999987764

>1hci_A Alpha-actinin 2; triple-helix coiled coil, contractIle protein, muscle, Z- LINE, actin-binding protein; 2.8A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1 a.7.1.1 a.7.1.1

Probab=99.26  E-value=6.1e-11  Score=87.32  Aligned_cols=90  Identities=10%  Similarity=0.171  Sum_probs=83.6

Q ss_pred             HHHHHHHHHhhHHHHhhchHhHHHHHHHhhhhcCCCChH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----
Q psy10627          2 INKVYSILFSSQAEIDGRQETFKSLKEFGLKVSPPREPE-------LTKLDELRRQLASSWEEQRTRLDHAHQAQ-----   69 (92)
Q Consensus         2 ~e~ll~~Hq~~~~EI~~r~~~~~~l~~~G~~L~~~~h~e-------l~~L~~~~~~l~~~We~R~~~L~q~~~lq-----   69 (92)
                      |+.++++|+.+..+|.++.+.+..+...|+.|+..+||+       +..|..+|..|......|+..|..++.++     
T Consensus       167 v~~ll~kh~~~~~~l~~~~~~v~~l~~~~~~L~~~~~~~~~~I~~~~~~l~~~W~~L~~~~~~R~~~L~~~~~~~~~~e~  246 (476)
T 1hci_A          167 VRALLRKHEAFESDLAAHQDRVEQIAAIAQELNELDYHDAVNVNDRCQKICDQWDRLGTLTQKRREALERMEKLLETIDQ  246 (476)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhCcCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            688999999999999999999999999999999999874       88899999999999999999999999988     


Q ss_pred             ---hhHHhHHHHHHHHHhchhcccC
Q psy10627         70 ---MFKEAADQAENWLVTKEATEYR   91 (92)
Q Consensus        70 ---~F~rda~q~e~Wl~~qE~~L~~   91 (92)
                         .|.++|..+.+||...+..|.+
T Consensus       247 l~~~f~~~a~~~~~Wl~~~~~~l~~  271 (476)
T 1hci_A          247 LHLEFAKRAAPFNNWMEGAMEDLQD  271 (476)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhc
Confidence               7999999999999988877654

>1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1

Probab=99.22  E-value=2.9e-11  Score=94.82  Aligned_cols=90  Identities=10%  Similarity=0.163  Sum_probs=85.0

Q ss_pred             HHHHHHHHHhhHHHHhhchHhHHHHHHHhhhhcCCCChH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----
Q psy10627          2 INKVYSILFSSQAEIDGRQETFKSLKEFGLKVSPPREPE-------LTKLDELRRQLASSWEEQRTRLDHAHQAQ-----   69 (92)
Q Consensus         2 ~e~ll~~Hq~~~~EI~~r~~~~~~l~~~G~~L~~~~h~e-------l~~L~~~~~~l~~~We~R~~~L~q~~~lq-----   69 (92)
                      |+.++++|+.+..+|.++++.++.+...|+.|+..+|++       +..|..+|..|...+..|+..|..++.++     
T Consensus       406 v~~ll~kh~~f~~el~~~~~~v~~l~~~~~~L~~~~~~~~~~I~~~~~~l~~~W~~L~~~~~~R~~~L~~~l~~~q~~~~  485 (863)
T 1sjj_A          406 IKALLKKHEAFESDLAAHQDRVEQIAAIAQELNELDYYDSPSVNARCQKICDQWDNLGALTQKRREALERTEKLLETIDQ  485 (863)
T ss_dssp             HHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            688999999999999999999999999999999999873       88899999999999999999999999999     


Q ss_pred             ---hhHHhHHHHHHHHHhchhcccC
Q psy10627         70 ---MFKEAADQAENWLVTKEATEYR   91 (92)
Q Consensus        70 ---~F~rda~q~e~Wl~~qE~~L~~   91 (92)
                         .|.++|+.+.+||...+..|.+
T Consensus       486 l~~~f~~~a~~~~~Wl~~~e~~l~~  510 (863)
T 1sjj_A          486 LYLEYAKRAAPFNNWMEGAMEDLQD  510 (863)
T ss_dssp             HHHHHHHHTTTTHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcc
Confidence               8999999999999999887764

>2iak_A Bullous pemphigoid antigen 1, isoform 5; triple helical bundle, spectrin repeat, cell adhesion; 3.00A {Mus musculus}

Probab=99.20  E-value=8.8e-11  Score=79.84  Aligned_cols=87  Identities=20%  Similarity=0.256  Sum_probs=76.3

Q ss_pred             HHHHHHHHHhhHHHHhhchHhHHHHHHHhhhhcCCCChH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHH
Q psy10627          2 INKVYSILFSSQAEIDGRQETFKSLKEFGLKVSPPREPE----LTKLDELRRQLASSWEEQRTRLDHAHQAQMFKEAADQ   77 (92)
Q Consensus         2 ~e~ll~~Hq~~~~EI~~r~~~~~~l~~~G~~L~~~~h~e----l~~L~~~~~~l~~~We~R~~~L~q~~~lq~F~rda~q   77 (92)
                      |+.+|++|+.+..+|.++.+.+..+...+..+.....+.    +..|..+|..|...+..|+..|.   .++.|.+||+.
T Consensus        55 v~~ll~kh~~~e~ei~~~~~~v~~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~L~~~~~~R~~~Le---~l~~F~~~~~~  131 (224)
T 2iak_A           55 VESHLENHKNVHRAIEEFESSLKEAKISEIQMTAPLKLSYTDKLHRLESQYAKLLNTSRNQERHLD---TLHNFVTRATN  131 (224)
T ss_dssp             HHHHHHHHHHHHHHHHHTHHHHHHHHHHGGGCCTTHHHHHHHHHHHHHHHHHHTTTHHHHHHHHHH---HHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHH
Confidence            789999999999999999999999987777765411111    88899999999999999999999   99999999999


Q ss_pred             HHHHHHhchhcccC
Q psy10627         78 AENWLVTKEATEYR   91 (92)
Q Consensus        78 ~e~Wl~~qE~~L~~   91 (92)
                      .++||..+++.+.+
T Consensus       132 ~~~Wi~eke~~~~s  145 (224)
T 2iak_A          132 ELIWLNEKEESEVA  145 (224)
T ss_dssp             HHHHHHHHHHHHCC
T ss_pred             HHHHHHHHHHHHhc
Confidence            99999999988764

>3edv_A Spectrin beta chain, brain 1; spectrin repeat, coiled coil, actin capping, actin-binding, alternative splicing, calmodulin-binding, cytoplasm; 1.95A {Homo sapiens}

Probab=99.20  E-value=1e-10  Score=82.34  Aligned_cols=89  Identities=12%  Similarity=0.137  Sum_probs=81.8

Q ss_pred             HHHHHHHHHhhHHHHhhchHhHHHHHHHhhhhcCCCChH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHH
Q psy10627          2 INKVYSILFSSQAEIDGRQETFKSLKEFGLKVSPPREPE--------LTKLDELRRQLASSWEEQRTRLDHAHQAQMFKE   73 (92)
Q Consensus         2 ~e~ll~~Hq~~~~EI~~r~~~~~~l~~~G~~L~~~~h~e--------l~~L~~~~~~l~~~We~R~~~L~q~~~lq~F~r   73 (92)
                      |+.++.+|..+..+|.++.+.++.+...|..|+...+++        +..|..+|..|......|+..|..++.++.|..
T Consensus       147 v~~l~~~h~~~~~~l~~~~~~v~~l~~~a~~L~~~~~~~~~~~i~~~~~~l~~~W~~l~~~~~~r~~~L~~~~~~~~F~~  226 (323)
T 3edv_A          147 VETLQRMHTTFEHDIQALGTQVRQLQEDAARLQAAYAGDKADDIQKRENEVLEAWKSLLDACESRRVRLVDTGDKFRFFS  226 (323)
T ss_dssp             HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            678999999999999999999999999999999876541        888999999999999999999999999999999


Q ss_pred             hHHHHHHHHHhchhccc
Q psy10627         74 AADQAENWLVTKEATEY   90 (92)
Q Consensus        74 da~q~e~Wl~~qE~~L~   90 (92)
                      +++.+.+||...+..+.
T Consensus       227 ~~~~l~~Wl~~~~~~l~  243 (323)
T 3edv_A          227 MVRDLMLWMEDVIRQIE  243 (323)
T ss_dssp             HHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHh
Confidence            99999999998877654

>1hci_A Alpha-actinin 2; triple-helix coiled coil, contractIle protein, muscle, Z- LINE, actin-binding protein; 2.8A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1 a.7.1.1 a.7.1.1

Probab=99.15  E-value=2.9e-10  Score=83.68  Aligned_cols=90  Identities=13%  Similarity=0.107  Sum_probs=80.8

Q ss_pred             HHHHHHHHHhhHHHHhhchHhHHHH---HHHhhhhcCCCCh----H-------HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10627          2 INKVYSILFSSQAEIDGRQETFKSL---KEFGLKVSPPREP----E-------LTKLDELRRQLASSWEEQRTRLDHAHQ   67 (92)
Q Consensus         2 ~e~ll~~Hq~~~~EI~~r~~~~~~l---~~~G~~L~~~~h~----e-------l~~L~~~~~~l~~~We~R~~~L~q~~~   67 (92)
                      |+.++++|..++.+|++....+..+   ...|..|+..+|+    +       +..|..+|..|...+..|+..|..++.
T Consensus       281 v~~ll~~h~~~~~~l~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~i~~~~~~L~~~w~~L~~~~~~R~~~L~~~l~  360 (476)
T 1hci_A          281 IQSLITAHEQFKATLPEADGERQSIMAIQNEVEKVIQSYNIRISSSNPYSTVTMDELRTKWDKVKQLVPIRDQSLQEELA  360 (476)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCSCSCCTTCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCCCcchhccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            6789999999999999999888877   6788888887664    1       999999999999999999999999998


Q ss_pred             H--------HhhHHhHHHHHHHHHhchhcccC
Q psy10627         68 A--------QMFKEAADQAENWLVTKEATEYR   91 (92)
Q Consensus        68 l--------q~F~rda~q~e~Wl~~qE~~L~~   91 (92)
                      .        +.|.++|+.+.+||..++..|.+
T Consensus       361 ~~~~~~~L~~~F~~~a~~~~~Wl~e~e~~l~~  392 (476)
T 1hci_A          361 RQHANERLRRQFAAQANAIGPWIQNKMEEIAR  392 (476)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred             HHHhhHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            5        59999999999999999887753

>3uun_A Dystrophin; triple helical, cell structure and stability, cytoskeletal, structural protein; 2.30A {Homo sapiens}

Probab=99.05  E-value=8.7e-10  Score=67.37  Aligned_cols=69  Identities=10%  Similarity=0.124  Sum_probs=62.6

Q ss_pred             HHHHHHHHHhhHHHHhhchHhHHHHHHHhhhhcCCCCh--H--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy10627          2 INKVYSILFSSQAEIDGRQETFKSLKEFGLKVSPPREP--E--------LTKLDELRRQLASSWEEQRTRLDHAHQAQM   70 (92)
Q Consensus         2 ~e~ll~~Hq~~~~EI~~r~~~~~~l~~~G~~L~~~~h~--e--------l~~L~~~~~~l~~~We~R~~~L~q~~~lq~   70 (92)
                      |+.++++|+.+..||.++.+.++.+...|..|+..+|+  +        +..|..+|..|...+..|+..|..++...+
T Consensus        38 v~~~l~~h~~l~~ei~~~~~~v~~~~~~g~~L~~~~~~~~~~~~~i~~~l~~l~~rw~~L~~~~~~R~~~Le~aL~~~Q  116 (119)
T 3uun_A           38 VKDQFHTHEGYMMDLTAHQGRVGNILQLGSKLIGTGKLSEDEETEVQEQMNLLNSRWECLRVASMEKQSNLHRVLMDLQ  116 (119)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            67899999999999999999999999999999988764  1        888999999999999999999999985543

>3uul_A Utrophin; spectrin repeat, structural protein, cytoskeletal, helical bundle; 1.95A {Rattus norvegicus} PDB: 3uum_A

Probab=99.02  E-value=2.1e-09  Score=65.76  Aligned_cols=67  Identities=18%  Similarity=0.195  Sum_probs=61.4

Q ss_pred             HHHHHHHHHhhHHHHhhchHhHHHHHHHhhhhcCCCCh---H-------HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10627          2 INKVYSILFSSQAEIDGRQETFKSLKEFGLKVSPPREP---E-------LTKLDELRRQLASSWEEQRTRLDHAHQA   68 (92)
Q Consensus         2 ~e~ll~~Hq~~~~EI~~r~~~~~~l~~~G~~L~~~~h~---e-------l~~L~~~~~~l~~~We~R~~~L~q~~~l   68 (92)
                      |+.++++|+.+..||.++.+.++.+...|..|+..+|+   +       +..|..+|..|...+..|+..|..++..
T Consensus        38 v~~~l~~h~~l~~ei~~~~~~v~~v~~~g~~L~~~~~~~~~~~~~i~~~l~~l~~rw~~L~~~~~~R~~~L~~aL~~  114 (118)
T 3uul_A           38 VKEQFATHETFMMELSAHQSSVGSVLQAGNQLMTQGTLSDEEEFEIQEQMTLLNARWEALRVESMERQSRLHDALME  114 (118)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            67899999999999999999999999999999998875   1       8889999999999999999999999743

>3lbx_A Spectrin alpha chain, erythrocyte; tetramer, complex, three-helix bundle, alpha helix repeat, helical linker, actin capping; 2.80A {Homo sapiens} PDB: 1owa_A

Probab=98.96  E-value=2.8e-09  Score=69.57  Aligned_cols=65  Identities=18%  Similarity=0.115  Sum_probs=60.5

Q ss_pred             HHHHHHHHHhhHHHHhhchHhHHHHHHHhhhhcCCCChH-------HHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10627          2 INKVYSILFSSQAEIDGRQETFKSLKEFGLKVSPPREPE-------LTKLDELRRQLASSWEEQRTRLDHAH   66 (92)
Q Consensus         2 ~e~ll~~Hq~~~~EI~~r~~~~~~l~~~G~~L~~~~h~e-------l~~L~~~~~~l~~~We~R~~~L~q~~   66 (92)
                      |+.++++|+.+.+||.++.+.++.+...|+.|+..+||.       +..|...|+.|......|+..|.+++
T Consensus        90 v~~ll~kH~afe~El~a~~~~~~~l~~~g~~Li~~~~~~~~~I~~rl~eL~~~W~~L~~~~~~R~~~L~eAl  161 (161)
T 3lbx_A           90 IQGKYQKHQSLEAEVQTKSRLMSELEKTREERFTMGHSAHEETKAHIEELRHLWDLLLELTLEKGDQLLRAL  161 (161)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence            678999999999999999999999999999999999973       88999999999999999999998753

>2spc_A Spectrin; cytoskeleton; 1.80A {Drosophila melanogaster} SCOP: a.7.1.1

Probab=98.90  E-value=2.5e-09  Score=64.98  Aligned_cols=62  Identities=16%  Similarity=0.210  Sum_probs=55.1

Q ss_pred             HHHHHHHHHhhHHHHhhchHhHHHHHHHhhhhcCCCChH-------HHHHHHHHHHHHHHHHHHHHHHH
Q psy10627          2 INKVYSILFSSQAEIDGRQETFKSLKEFGLKVSPPREPE-------LTKLDELRRQLASSWEEQRTRLD   63 (92)
Q Consensus         2 ~e~ll~~Hq~~~~EI~~r~~~~~~l~~~G~~L~~~~h~e-------l~~L~~~~~~l~~~We~R~~~L~   63 (92)
                      |+.|+++|+.+..+|.++.+++..+...|+.|+..|||+       ...|..+|..|....+.|+..|.
T Consensus        38 v~~Llkkh~~fe~~~~~~~~~i~~l~~~a~~L~~~~h~~~~~I~~r~~~l~~~w~~L~~~~~~Rr~~L~  106 (107)
T 2spc_A           38 VEALIKKHEDFDKAINGHEQKIAALQTVADQLIAQNHYASNLVDEKRKQVLERWRHLKEGLIEKRSRLG  106 (107)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            789999999999999999999999999999999999985       66777778888888778887763

>1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1

Probab=98.85  E-value=8.6e-09  Score=80.88  Aligned_cols=90  Identities=14%  Similarity=0.130  Sum_probs=79.1

Q ss_pred             HHHHHHHHHhhHHHHhhchHhHHHHHHHhhhhcCC-------CC---hH----HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10627          2 INKVYSILFSSQAEIDGRQETFKSLKEFGLKVSPP-------RE---PE----LTKLDELRRQLASSWEEQRTRLDHAHQ   67 (92)
Q Consensus         2 ~e~ll~~Hq~~~~EI~~r~~~~~~l~~~G~~L~~~-------~h---~e----l~~L~~~~~~l~~~We~R~~~L~q~~~   67 (92)
                      |+.++++|+.++.+|.++.+.+..+...|+.+..-       ++   +.    +..|..+|..|...+..|+..|.+++.
T Consensus       520 ve~ll~kh~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~rw~~L~~~~~~R~~~L~~~l~  599 (863)
T 1sjj_A          520 IQGLTTAHEQFKATLPDADKERQAILGIHNEVSKIVQTYHVNMAGTNPYTTITPQEINGKWEHVRQLVPRRDQALMEEHA  599 (863)
T ss_dssp             GHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCSCCSSSSCCHHHHHHHHHHHHHHHHHHHHHHGGGHH
T ss_pred             HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            68899999999999999999999988888876551       22   21    999999999999999999999999996


Q ss_pred             --------HHhhHHhHHHHHHHHHhchhcccC
Q psy10627         68 --------AQMFKEAADQAENWLVTKEATEYR   91 (92)
Q Consensus        68 --------lq~F~rda~q~e~Wl~~qE~~L~~   91 (92)
                              .+.|.++|+.+.+||..++..|.+
T Consensus       600 ~~~~~~~l~~~F~~~a~~~~~Wi~e~e~~l~~  631 (863)
T 1sjj_A          600 RQQQNERLRKQFGAQANVIGPWIQTKMEEIGR  631 (863)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred             HhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence                    789999999999999999987754

>3lbx_A Spectrin alpha chain, erythrocyte; tetramer, complex, three-helix bundle, alpha helix repeat, helical linker, actin capping; 2.80A {Homo sapiens} PDB: 1owa_A

Probab=98.83  E-value=6.8e-09  Score=67.75  Aligned_cols=72  Identities=19%  Similarity=0.227  Sum_probs=51.3

Q ss_pred             hHhHHHHHHHhhhhcCCCCh--H-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHHHHhchhcccC
Q psy10627         20 QETFKSLKEFGLKVSPPREP--E-LTKLDELRRQLASSWEEQRTRLDHAHQAQMFKEAADQAENWLVTKEATEYR   91 (92)
Q Consensus        20 ~~~~~~l~~~G~~L~~~~h~--e-l~~L~~~~~~l~~~We~R~~~L~q~~~lq~F~rda~q~e~Wl~~qE~~L~~   91 (92)
                      .|+-+.+...|.+++.....  + +..|..+|..|...+..|+..|.+++.++.|.+||+.++.||..++.++.+
T Consensus         7 ~~~~~~~~~~~~k~~e~a~~I~~r~~~l~~rw~~L~~~a~~R~~~Le~s~~lq~F~~d~~el~~Wi~ek~~~a~~   81 (161)
T 3lbx_A            7 FPKETVVESSGPKVLETAEEIQERRQEVLTRYQSFKERVAERGQKLEDSYHLQVFKRDADDLGKWIMEKVNILTD   81 (161)
T ss_dssp             ---------------CCSTTGGGHHHHGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CCchhccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC
Confidence            34444556778888776542  2 999999999999999999999999999999999999999999999887653

>3f31_A Spectrin alpha chain, brain; LONE helix followed by A triple helical bundle, actin cappin binding, alternative splicing, calcium; 2.30A {Homo sapiens} SCOP: a.7.1.0

Probab=98.81  E-value=1.1e-08  Score=65.79  Aligned_cols=62  Identities=16%  Similarity=0.115  Sum_probs=57.7

Q ss_pred             HHHHHHHHHhhHHHHhhchHhHHHHHHHhhhhcCCCChH-------HHHHHHHHHHHHHHHHHHHHHHH
Q psy10627          2 INKVYSILFSSQAEIDGRQETFKSLKEFGLKVSPPREPE-------LTKLDELRRQLASSWEEQRTRLD   63 (92)
Q Consensus         2 ~e~ll~~Hq~~~~EI~~r~~~~~~l~~~G~~L~~~~h~e-------l~~L~~~~~~l~~~We~R~~~L~   63 (92)
                      |+.++++|+.+.+||.++.+.++.+...|+.|+..+||.       +..|...|+.|....+.|...|.
T Consensus        80 v~~~l~kH~afe~El~a~~~~l~~v~~~g~~Li~~~~~~~~~I~~rl~~l~~~W~~L~~~~~~r~~~L~  148 (149)
T 3f31_A           80 LQGKLQKHQAFEAEVQANSGAIVKLDETGNLMISEGHFASETIRTRLMELHRQWELLLEKMREKGIKLL  148 (149)
T ss_dssp             HHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            678999999999999999999999999999999999973       88899999999999999998886

>1u5p_A Spectrin alpha chain, brain; alpha spectrin, two repeats of spectrin, alpha-helical linker region, 3-helix coiled coil, structural protein; 2.00A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1

Probab=98.79  E-value=1.1e-08  Score=68.28  Aligned_cols=66  Identities=14%  Similarity=0.196  Sum_probs=58.8

Q ss_pred             HHHHHHHHHhhHHHHhhchHhHHHHHHHhhhhcCCCChH-------HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10627          2 INKVYSILFSSQAEIDGRQETFKSLKEFGLKVSPPREPE-------LTKLDELRRQLASSWEEQRTRLDHAHQ   67 (92)
Q Consensus         2 ~e~ll~~Hq~~~~EI~~r~~~~~~l~~~G~~L~~~~h~e-------l~~L~~~~~~l~~~We~R~~~L~q~~~   67 (92)
                      |+.++++|+.+..||.++.+.+..+...|+.|+..+||+       +..|...|..|......|+..|..+++
T Consensus       144 v~~ll~kh~~~~~el~~~~~~i~~l~~~g~~L~~~~~~~~~~i~~~~~~l~~~W~~L~~~~~~R~~~L~~al~  216 (216)
T 1u5p_A          144 VQNLRKKHKRLEAELAAHEPAIQGVLDTGKKLSDDNTIGKEEIQQRLAQFVDHWKELKQLAAARGQRLEESLE  216 (216)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHTC----
T ss_pred             HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence            688999999999999999999999999999999999973       888999999999999999999987763

>3r6n_A Desmoplakin; spectrin repeat, SH3 domain, cell adhesion, desmosome; 2.95A {Homo sapiens}

Probab=98.78  E-value=4.6e-08  Score=73.23  Aligned_cols=82  Identities=16%  Similarity=0.120  Sum_probs=72.0

Q ss_pred             HHHHHHHHHhhHHHHhhchHhHHHHHHHhhhhcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHH
Q psy10627          2 INKVYSILFSSQAEIDGRQETFKSLKEFGLKVSPPREPELTKLDELRRQLASSWEEQRTRLDHAHQAQMFKEAADQAENW   81 (92)
Q Consensus         2 ~e~ll~~Hq~~~~EI~~r~~~~~~l~~~G~~L~~~~h~el~~L~~~~~~l~~~We~R~~~L~q~~~lq~F~rda~q~e~W   81 (92)
                      |+.|+++|+.+.++|.++.+.++.+...+.     ..+.+..|...+..|......|+..|.   .++.|++||+..++|
T Consensus        37 Ve~LLqKH~~lE~eI~a~~~~v~~l~~~a~-----~~~~~~~L~~~y~~L~~~a~~Rr~~Le---~L~qFl~d~~ee~~W  108 (450)
T 3r6n_A           37 VEQHINSHRGIHNSIGDYRWQLDKIKADLR-----EKSAIYQLEEEYENLLKASFERMDHLR---QLQNIIQATSREIMW  108 (450)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-----CcHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHH
Confidence            789999999999999999999999876632     123488999999999999999999998   689999999999999


Q ss_pred             HHhchhcccC
Q psy10627         82 LVTKEATEYR   91 (92)
Q Consensus        82 l~~qE~~L~~   91 (92)
                      |..++..+.+
T Consensus       109 i~EKe~~~~s  118 (450)
T 3r6n_A          109 INDCEEEELL  118 (450)
T ss_dssp             HHHHHHHHHS
T ss_pred             HHHHHHHHhc
Confidence            9999887643

>1s35_A Beta-I spectrin, spectrin beta chain, erythrocyte; two repeats of spectrin, alpha helical linker region, 3- helix coiled-coils, beta spectrin; 2.40A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1

Probab=98.75  E-value=2.1e-08  Score=66.80  Aligned_cols=65  Identities=9%  Similarity=0.040  Sum_probs=59.9

Q ss_pred             HHHHHHHHHhhHHHHhhchHhHHHHHHHhhhhcCCCChH-------HHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10627          2 INKVYSILFSSQAEIDGRQETFKSLKEFGLKVSPPREPE-------LTKLDELRRQLASSWEEQRTRLDHAH   66 (92)
Q Consensus         2 ~e~ll~~Hq~~~~EI~~r~~~~~~l~~~G~~L~~~~h~e-------l~~L~~~~~~l~~~We~R~~~L~q~~   66 (92)
                      |+.++++|+.+..+|.++.+.+..+...|+.|+..+||+       +..|..+|..|.....+|+..|..++
T Consensus       142 v~~llkkh~~f~~~l~~~~~~i~~l~~~a~~L~~~~h~~~~~I~~~~~~l~~rw~~l~~~~~~R~~~L~~~l  213 (214)
T 1s35_A          142 AEAGIRKFEDFLGSMENNRDKVLSPVDSGNKLVAEGNLYSDKIKEKVQLIEDRHRKNNEKAQEASVLLRDNL  213 (214)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-
T ss_pred             HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            689999999999999999999999999999999999984       78899999999999999999998654

>2iak_A Bullous pemphigoid antigen 1, isoform 5; triple helical bundle, spectrin repeat, cell adhesion; 3.00A {Mus musculus}

Probab=98.62  E-value=1.8e-08  Score=68.29  Aligned_cols=62  Identities=10%  Similarity=0.146  Sum_probs=44.4

Q ss_pred             HHHHHHHHHhhHHHHhhchHhHHHHHHHhhhhcCCCChH-------HHHHHHHHHHHHHHHHHHHHHHH
Q psy10627          2 INKVYSILFSSQAEIDGRQETFKSLKEFGLKVSPPREPE-------LTKLDELRRQLASSWEEQRTRLD   63 (92)
Q Consensus         2 ~e~ll~~Hq~~~~EI~~r~~~~~~l~~~G~~L~~~~h~e-------l~~L~~~~~~l~~~We~R~~~L~   63 (92)
                      |+.|+++|+.+.+||+++++.|+.|...|+.|+..+||+       +..|...|+.|.+....|+..|.
T Consensus       155 v~~L~~kh~~l~~el~~~~~~v~~v~~~g~~L~~~~h~~~~~I~~~~~~l~~~W~~L~~l~~~R~~~L~  223 (224)
T 2iak_A          155 VARKKSYHAELMRELEQKEESIKAVQEIAEQLLLENHPARLTIEAYRAAMQTQWSWILQLCQCVEQHIQ  223 (224)
T ss_dssp             -------CSSHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHHHHHHHHHHHC-------
T ss_pred             HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            678999999999999999999999999999999999984       77788888888888888887775

>1cun_A Protein (alpha spectrin); two repeats of spectrin, alpha helical linker region, 2 tandem 3-helix coiled- coils, structural protein; 2.00A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 PDB: 1aj3_A

Probab=98.62  E-value=1.4e-07  Score=62.52  Aligned_cols=65  Identities=9%  Similarity=0.133  Sum_probs=60.6

Q ss_pred             HHHHHHHHHhhHHHHhhchHhHHHHHHHhhhhcCCCChH-------HHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10627          2 INKVYSILFSSQAEIDGRQETFKSLKEFGLKVSPPREPE-------LTKLDELRRQLASSWEEQRTRLDHAH   66 (92)
Q Consensus         2 ~e~ll~~Hq~~~~EI~~r~~~~~~l~~~G~~L~~~~h~e-------l~~L~~~~~~l~~~We~R~~~L~q~~   66 (92)
                      |+.++++|+.+..+|.++.+.+..+...|+.|+..+||+       +..|..+|..|......|+..|..++
T Consensus       141 v~~ll~~h~~~~~el~~~~~~i~~l~~~~~~L~~~~~~~~~~I~~~~~~l~~~w~~l~~~~~~R~~~L~~a~  212 (213)
T 1cun_A          141 IQGLLKKHEAFETDFTVHKDRVNDVCANGEDLIKKNNHHVENITAKMKGLKGKVSDLEKAAAQRKAKLDENS  212 (213)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence            678999999999999999999999999999999999984       88899999999999999999998765

>3f31_A Spectrin alpha chain, brain; LONE helix followed by A triple helical bundle, actin cappin binding, alternative splicing, calcium; 2.30A {Homo sapiens} SCOP: a.7.1.0

Probab=98.58  E-value=5.9e-08  Score=62.36  Aligned_cols=63  Identities=21%  Similarity=0.302  Sum_probs=50.1

Q ss_pred             HhhhhcCCCCh--H-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHHHHhchhcccC
Q psy10627         29 FGLKVSPPREP--E-LTKLDELRRQLASSWEEQRTRLDHAHQAQMFKEAADQAENWLVTKEATEYR   91 (92)
Q Consensus        29 ~G~~L~~~~h~--e-l~~L~~~~~~l~~~We~R~~~L~q~~~lq~F~rda~q~e~Wl~~qE~~L~~   91 (92)
                      .|.++......  + +..|..+|..|...+..|+..|.+++.++.|.+||+.+++||..++.++.+
T Consensus         6 ~~~~~~~~a~~I~~r~~~l~~r~~~L~~~a~~R~~~Le~s~~l~~F~~d~~el~~Wi~ek~~~~~~   71 (149)
T 3f31_A            6 SGVKVLETAEDIQERRQQVLDRYHRFKELSTLRRQKLEDSYRFQFFQRDAEELEKWIQEKLQIASD   71 (149)
T ss_dssp             -------CTTHHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred             CCCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence            44555554432  2 888999999999999999999999999999999999999999999988754

>3pdy_A Plectin; cytoskeleton, plakin, intermediate filament, spectrin repeat structural protein, crosslinking; 2.22A {Homo sapiens}

Probab=98.27  E-value=1.9e-06  Score=57.95  Aligned_cols=55  Identities=13%  Similarity=0.288  Sum_probs=46.4

Q ss_pred             HHHHHHHHHhhHHHHhhchHhHHHHHHHhhhhcCCCChHHHHHHHHHHHHHHHHH
Q psy10627          2 INKVYSILFSSQAEIDGRQETFKSLKEFGLKVSPPREPELTKLDELRRQLASSWE   56 (92)
Q Consensus         2 ~e~ll~~Hq~~~~EI~~r~~~~~~l~~~G~~L~~~~h~el~~L~~~~~~l~~~We   56 (92)
                      |+.++.+|+.+++||.++++.+..+...|+.|+..+||.-..|....+.|...|.
T Consensus       140 v~~l~~k~~~f~~el~~~~~~v~~l~~~~~~Ll~~~h~~~~~I~~~~~~l~~~W~  194 (210)
T 3pdy_A          140 MTAKKESYSALMRELELKEKKIKELQNAGDRLLREDHPARPTVESFQAALQTQWS  194 (210)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHH
Confidence            6789999999999999999999999999999999999865555555555555555

>3edu_A Beta-I spectrin, spectrin beta chain, erythrocyte; ankyrin, ankyrin-binding domain, actin capping, AC binding, cytoskeleton, disease mutation; 2.10A {Homo sapiens} PDB: 3f57_A

Probab=97.98  E-value=3.9e-06  Score=56.18  Aligned_cols=68  Identities=7%  Similarity=0.076  Sum_probs=44.6

Q ss_pred             HHHHHHHHHhhHHHHhhchHhHHHHHHHhhhhcCCCCh-H-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10627          2 INKVYSILFSSQAEIDGRQETFKSLKEFGLKVSPPREP-E-------LTKLDELRRQLASSWEEQRTRLDHAHQAQ   69 (92)
Q Consensus         2 ~e~ll~~Hq~~~~EI~~r~~~~~~l~~~G~~L~~~~h~-e-------l~~L~~~~~~l~~~We~R~~~L~q~~~lq   69 (92)
                      |+.++.+|..+..+|.++++.+..+...|..|+..+++ +       +..|...|..|...-+.|+..|..++++.
T Consensus       142 v~~l~~~h~~~e~dL~~~~~~v~~l~~~a~~L~~~~~~~~a~~i~~~~~~l~~~W~~L~~~~~~R~~~L~~a~~~~  217 (218)
T 3edu_A          142 AESFHRVHTAFERELHLLGVQVQQFQDVATRLQTAYAGEKAEAIQNKEQEVSAAWQALLDACAGRRTQLVDTADKF  217 (218)
T ss_dssp             ----CCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC-------------
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            67889999999999999999999999999999998754 2       66777777777777778999999887753

>3fb2_A Spectrin alpha chain, brain spectrin; non-erythroid alpha chain alpha-II spectrin, fordrin alpha chain, sptan1, SPTA2_human, NESG, HR5563A; 2.30A {Homo sapiens}

Probab=97.95  E-value=5.6e-06  Score=55.43  Aligned_cols=56  Identities=11%  Similarity=0.211  Sum_probs=40.7

Q ss_pred             HHHHHHHHHhhHHHHhhchHhHHHHHHHhhhhcCCCChHHHHHHHHHHHHHHHHHH
Q psy10627          2 INKVYSILFSSQAEIDGRQETFKSLKEFGLKVSPPREPELTKLDELRRQLASSWEE   57 (92)
Q Consensus         2 ~e~ll~~Hq~~~~EI~~r~~~~~~l~~~G~~L~~~~h~el~~L~~~~~~l~~~We~   57 (92)
                      |+.++++|..+..+|.++.+.+..+...|..|+..+||+.+.+......|...|..
T Consensus       154 ve~ll~~h~~f~~~l~~~~~~v~~l~~~~~~L~~~~h~~~~~I~~~~~~l~~rW~~  209 (218)
T 3fb2_A          154 VEALIKKHEDFDKAINVQEEKIAALQAFADQLIAAGHYAKGDISSRRNEVLDRWRR  209 (218)
T ss_dssp             --------CHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHH
Confidence            67899999999999999999999999999999999998655566666666666654

>1g8x_A Myosin II heavy chain fused to alpha-actinin 3; motor, lever ARM, protein engineering, structural protein; HET: ADP; 2.80A {Dictyostelium discoideum} SCOP: k.1.1.1

Probab=97.76  E-value=1.2e-06  Score=70.94  Aligned_cols=74  Identities=11%  Similarity=-0.054  Sum_probs=66.6

Q ss_pred             HHHHHHHHHhhHHHHhhchHhHH-HHHHHhhhhcCCCChH-------HHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhhH
Q psy10627          2 INKVYSILFSSQAEIDGRQETFK-SLKEFGLKVSPPREPE-------LTKLD-ELRRQLASSWEEQRTRLDHAHQAQMFK   72 (92)
Q Consensus         2 ~e~ll~~Hq~~~~EI~~r~~~~~-~l~~~G~~L~~~~h~e-------l~~L~-~~~~~l~~~We~R~~~L~q~~~lq~F~   72 (92)
                      |++++++|+.+.++|.++++++. .+...|+.|++.+|++       ...|. +.|+.|.+....|+..|++++++|++.
T Consensus       921 Vqal~KKhea~e~dl~a~e~ri~~~l~~~a~eL~~~~y~~~~~I~~R~~~L~~~~W~~L~~la~~Rk~~Le~~lq~~~~~ 1000 (1010)
T 1g8x_A          921 VQAKLKNLEAFDGECQSLEGQSNSDLLSILAQLTELNYNGVPELTERKDTFFAQQWTGVKSSAETYKNTLLAELERLQKI 1000 (1010)
T ss_dssp             TGGGTTSHHHHTTTTTHHHHTHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHTTHHHHHHHHTHHHHTTTTTTTSTTTTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            67899999999999999999999 8999999999999874       66674 789999999999999999999999988


Q ss_pred             HhH
Q psy10627         73 EAA   75 (92)
Q Consensus        73 rda   75 (92)
                      .|.
T Consensus      1001 ~~~ 1003 (1010)
T 1g8x_A         1001 EDL 1003 (1010)
T ss_dssp             TST
T ss_pred             HHh
Confidence            764

>1quu_A Human skeletal muscle alpha-actinin 2; triple-helix coiled coil, contractIle protein; 2.50A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1

Probab=97.58  E-value=0.00035  Score=47.54  Aligned_cols=69  Identities=12%  Similarity=0.077  Sum_probs=54.3

Q ss_pred             HHHHHHHHHhhHHHHhhch---HhHHHHHHHhhhhcCCCC-------hH----HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10627          2 INKVYSILFSSQAEIDGRQ---ETFKSLKEFGLKVSPPRE-------PE----LTKLDELRRQLASSWEEQRTRLDHAHQ   67 (92)
Q Consensus         2 ~e~ll~~Hq~~~~EI~~r~---~~~~~l~~~G~~L~~~~h-------~e----l~~L~~~~~~l~~~We~R~~~L~q~~~   67 (92)
                      |+.|+++|..++.+|.+.+   ..+..+...++.|+...|       |+    +..|..+|..|...-..|+..|..++.
T Consensus       164 v~~ll~~h~~~~~~l~~~~~~~~~i~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~W~~L~~~~~~R~~~L~~~l~  243 (250)
T 1quu_A          164 IQSLITAHEQFKATLPEADGERQSIMAIQNEVEKVIQSYNIRISSSNPYSTVTMDELRTKWDKVKQLVPIRDQSLQEELA  243 (250)
T ss_dssp             HHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHSCTTSCCSCTTCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCcccCcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            6889999999995555555   555555666677765543       32    999999999999999999999999988


Q ss_pred             HHh
Q psy10627         68 AQM   70 (92)
Q Consensus        68 lq~   70 (92)
                      .|.
T Consensus       244 ~q~  246 (250)
T 1quu_A          244 RQH  246 (250)
T ss_dssp             HHS
T ss_pred             HHh
Confidence            764

>2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A {Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A*

Probab=97.44  E-value=4.4e-05  Score=61.78  Aligned_cols=71  Identities=13%  Similarity=0.019  Sum_probs=47.2

Q ss_pred             HHHHHHHHHhhHHHHhhchHhHH-HHHHHhhhhcCCCChHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHhhH
Q psy10627          2 INKVYSILFSSQAEIDGRQETFK-SLKEFGLKVSPPREPELTKLDELRRQ--------LASSWEEQRTRLDHAHQAQMFK   72 (92)
Q Consensus         2 ~e~ll~~Hq~~~~EI~~r~~~~~-~l~~~G~~L~~~~h~el~~L~~~~~~--------l~~~We~R~~~L~q~~~lq~F~   72 (92)
                      |++++++|+.+.++|.++++++. .+...|+.|+..+|++-+.+..+...        |.+.-.+|+..|+.++++|+-.
T Consensus       913 vqallkKhea~e~dl~a~e~ri~~~l~~~a~~L~~~~y~~~~~I~~R~~~l~~~~W~~L~~~a~~Rr~~L~~~~~~~q~~  992 (995)
T 2ycu_A          913 VQAKLKNLEAFDGECQSLEGQSNSDLLSILAQLTELNYNGVPELTERKDTFFAQQWTGVKSSAETYKNTLLAELERLQKI  992 (995)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTCSCSSHHHHHHHHTTTHHHHHHHHHHHHTHHHHHHHHHHHSSSCCCC-------------
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            68899999999999999999997 89999999999999864444444444        4444456999999999988754

>1g8x_A Myosin II heavy chain fused to alpha-actinin 3; motor, lever ARM, protein engineering, structural protein; HET: ADP; 2.80A {Dictyostelium discoideum} SCOP: k.1.1.1

Probab=97.36  E-value=0.0024  Score=51.91  Aligned_cols=51  Identities=20%  Similarity=0.222  Sum_probs=46.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHH--------HHhhHHhHHHHHHHHHhchhcccC
Q psy10627         41 LTKLDELRRQLASSWEEQRTRLDHAHQ--------AQMFKEAADQAENWLVTKEATEYR   91 (92)
Q Consensus        41 l~~L~~~~~~l~~~We~R~~~L~q~~~--------lq~F~rda~q~e~Wl~~qE~~L~~   91 (92)
                      +..|...|..|..+..+|...|...+.        .+.|.++|+..++|+..++.+|++
T Consensus       853 ~~dL~~~W~~Le~ae~eRe~~L~~el~Rqe~L~~L~qkF~rka~~~e~Wl~ek~~~l~s  911 (1010)
T 1g8x_A          853 PNEIDSTWSALEKAEQEHAEALRIELKRQKKIAVLLQKYNRILKKLENWATTKSVYLGS  911 (1010)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHSS
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            899999999999999999999998644        599999999999999999988865

>2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A {Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A*

Probab=96.53  E-value=0.00016  Score=58.58  Aligned_cols=51  Identities=20%  Similarity=0.202  Sum_probs=44.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHhhHHhHHHHHHHHHhchhcccC
Q psy10627         41 LTKLDELRRQLASSWEEQRTRLDHAH--------QAQMFKEAADQAENWLVTKEATEYR   91 (92)
Q Consensus        41 l~~L~~~~~~l~~~We~R~~~L~q~~--------~lq~F~rda~q~e~Wl~~qE~~L~~   91 (92)
                      +..|...|..|..+..+|...|...+        .+++|.++|+.+|+||..+|..|.+
T Consensus       845 ~~~L~~~W~~L~~ae~er~~~L~~el~RlerL~~la~kf~~ka~~~e~Wl~eke~~l~s  903 (995)
T 2ycu_A          845 PNEIDSTWSALEKAEQEHAEALRIELKRQKKIAVLLQKYNRILKKLENWATTKSVYLGS  903 (995)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTGGGGCCCCCCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            78899999999999999998887544        2489999999999999999988753

>1wlx_A Alpha-actinin 4; three-helix bundle, protein binding; NMR {Homo sapiens}

Probab=95.79  E-value=0.068  Score=33.70  Aligned_cols=64  Identities=6%  Similarity=0.023  Sum_probs=49.9

Q ss_pred             HHHHHHHHHhhHHHHhhchHhHHHHHHHhhhhcC---C-------CChH----HHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10627          2 INKVYSILFSSQAEIDGRQETFKSLKEFGLKVSP---P-------REPE----LTKLDELRRQLASSWEEQRTRLDHA   65 (92)
Q Consensus         2 ~e~ll~~Hq~~~~EI~~r~~~~~~l~~~G~~L~~---~-------~h~e----l~~L~~~~~~l~~~We~R~~~L~q~   65 (92)
                      |+.|+..|..+++.+...+..|+.+....+.|-.   +       .+|.    ...|...|+.|...=.+|...|+.-
T Consensus        47 I~~L~~~He~F~~~L~~a~~e~~~i~~i~~el~~~~~~~~~~~~~~npYT~it~~~l~~~W~~l~~li~~Rd~~Lq~E  124 (129)
T 1wlx_A           47 IEGLISAHDQFKSTLPDADREREAILAIHKEAQRIAESNHIKLSGSNPYTTVTPQIINSKWEKVQQLVPKRDHALLEE  124 (129)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCSSSCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhCcCCCCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            6889999999999999988888888444333321   1       1131    8999999999999999999998753

>2odv_A Plectin 1, HD1; plakin domain, spectrin repeat, cytoskeleton, hemidesmosomes epidermolysis bullosa, structural protein; 2.05A {Homo sapiens} PDB: 2odu_A

Probab=95.39  E-value=0.17  Score=34.72  Aligned_cols=49  Identities=16%  Similarity=0.100  Sum_probs=44.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHhhHHhHHHHHHHHHhchhcc
Q psy10627         41 LTKLDELRRQLASSWEEQRTRLDHA--------HQAQMFKEAADQAENWLVTKEATE   89 (92)
Q Consensus        41 l~~L~~~~~~l~~~We~R~~~L~q~--------~~lq~F~rda~q~e~Wl~~qE~~L   89 (92)
                      +..|...|..|..+=.+|...|...        .-.+.|.++|+..++|++..+..|
T Consensus        95 ~~di~~~W~~Le~ae~eRe~aL~~el~RlerLe~La~kf~rka~~~e~~L~~~~~~L  151 (235)
T 2odv_A           95 PLDVEKEWGKLHVAILEREKQLRSEFERLEALQRIVTKLQMEAGLAEEQLNQADALL  151 (235)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            8899999999999999999998887        567899999999999999887766

>2odv_A Plectin 1, HD1; plakin domain, spectrin repeat, cytoskeleton, hemidesmosomes epidermolysis bullosa, structural protein; 2.05A {Homo sapiens} PDB: 2odu_A

Probab=94.90  E-value=0.041  Score=37.76  Aligned_cols=57  Identities=12%  Similarity=0.029  Sum_probs=47.6

Q ss_pred             HHHHHhhHHHHhhchHhHHHHHHHhhhhcCCCChHHHHHHHHHHHHHHHHHHHHHHH
Q psy10627          6 YSILFSSQAEIDGRQETFKSLKEFGLKVSPPREPELTKLDELRRQLASSWEEQRTRL   62 (92)
Q Consensus         6 l~~Hq~~~~EI~~r~~~~~~l~~~G~~L~~~~h~el~~L~~~~~~l~~~We~R~~~L   62 (92)
                      +++|..+..+|.++++.+..+...++.|....|++...+..+...|.+.|..=+..+
T Consensus       164 ~k~~e~ie~dL~~~e~~i~~l~~~a~~L~~~~y~~a~~i~~r~~~l~~~w~~L~~~~  220 (235)
T 2odv_A          164 PQRAGEVERDLDKADSMIRLLFNDVQTLKDGRHPQGEQMYRRVYRLHKRLVAIRTEY  220 (235)
T ss_dssp             CSCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHH
Confidence            367999999999999999999999999999998877777777777777777644433

>3pe0_A Plectin; cytoskeleton, plakin, spectrin repeat, SH3, structural prote intermediate filament, crosslinking; 2.95A {Homo sapiens}

Probab=92.70  E-value=0.057  Score=37.77  Aligned_cols=36  Identities=6%  Similarity=0.095  Sum_probs=33.4

Q ss_pred             HHHHHHHHHhhHHHHhhchHhHHHHHHHhhhhcCCC
Q psy10627          2 INKVYSILFSSQAEIDGRQETFKSLKEFGLKVSPPR   37 (92)
Q Consensus         2 ~e~ll~~Hq~~~~EI~~r~~~~~~l~~~G~~L~~~~   37 (92)
                      ++.||++|+.++.+|.++...+..+...++.|+..+
T Consensus       152 ~~~LLkkh~~le~~l~~~~~~i~~L~~~a~~l~~l~  187 (283)
T 3pe0_A          152 LEDLLQDAQDEKEQLNEYKGHLSGLAKRAKAVVQLK  187 (283)
T ss_dssp             HHHHTCCHHHHHHHHHHHHHHHHHHHHHHTTCCCCG
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence            678999999999999999999999999999998754

>3lbx_B Beta-I spectrin, spectrin beta chain, erythrocyte; tetramer, complex, three-helix bundle, alpha helix repeat, helical linker, actin capping; 2.80A {Homo sapiens}

Probab=88.25  E-value=0.33  Score=31.23  Aligned_cols=29  Identities=14%  Similarity=0.121  Sum_probs=26.1

Q ss_pred             HHHHHHHHHhhHHHHhhchHhHHHHHHHh
Q psy10627          2 INKVYSILFSSQAEIDGRQETFKSLKEFG   30 (92)
Q Consensus         2 ~e~ll~~Hq~~~~EI~~r~~~~~~l~~~G   30 (92)
                      |+.||++|..+..+|.++++.|..+...+
T Consensus       145 ve~LlkkH~~fe~~l~~~~e~i~~L~~~t  173 (185)
T 3lbx_B          145 VEKLIKRHEAFEKSTASWAERFAALEKPT  173 (185)
T ss_dssp             HHHHHHHHHHHHHHHHHTHHHHHHHHSCC
T ss_pred             HHHHHHHHHHHHHHHHHhHHHHHHHhhhH
Confidence            68999999999999999999999986543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	92
d1s35a1	106	Spectrin beta chain {Human (Homo sapiens) [TaxId:	99.25
d1cuna2	104	Spectrin alpha chain {Chicken (Gallus gallus) [Tax	99.24
d1u5pa1	110	Spectrin alpha chain {Chicken (Gallus gallus) [Tax	99.18
d1quua2	124	alpha-actinin {Human (Homo sapiens) [TaxId: 9606]}	99.1
d1quua1	124	alpha-actinin {Human (Homo sapiens) [TaxId: 9606]}	99.07
d1u5pa2	101	Spectrin alpha chain {Chicken (Gallus gallus) [Tax	99.03
d1s35a2	105	Spectrin beta chain {Human (Homo sapiens) [TaxId:	98.99
d2spca_	107	Spectrin alpha chain {Drosophila sp. [TaxId: 7242]	98.93
d1hcia4	114	alpha-actinin {Human (Homo sapiens) [TaxId: 9606]}	98.92
d1owaa_	156	Spectrin alpha chain {Human (Homo sapiens) [TaxId:	98.82
d1owaa_	156	Spectrin alpha chain {Human (Homo sapiens) [TaxId:	97.99
d1quua1	124	alpha-actinin {Human (Homo sapiens) [TaxId: 9606]}	96.34
d1quua2	124	alpha-actinin {Human (Homo sapiens) [TaxId: 9606]}	95.08
d1hcia4	114	alpha-actinin {Human (Homo sapiens) [TaxId: 9606]}	94.71

>d1s35a1 a.7.1.1 (A:1063-1168) Spectrin beta chain {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: Spectrin repeat-like
superfamily: Spectrin repeat
family: Spectrin repeat
domain: Spectrin beta chain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.25  E-value=2.6e-11  Score=71.81  Aligned_cols=65  Identities=28%  Similarity=0.397  Sum_probs=60.3

Q ss_pred             HHHHHHHHHhhHHHHhhchHhHHHHHHHhhhhcCCCCh-H-------HHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10627          2 INKVYSILFSSQAEIDGRQETFKSLKEFGLKVSPPREP-E-------LTKLDELRRQLASSWEEQRTRLDHAH   66 (92)
Q Consensus         2 ~e~ll~~Hq~~~~EI~~r~~~~~~l~~~G~~L~~~~h~-e-------l~~L~~~~~~l~~~We~R~~~L~q~~   66 (92)
                      |+.++++|.++..+|+++.+.|+.+...|+.|+...++ +       +..|..+|..|.+.|..|+..|++|+
T Consensus        34 ~~~~l~~h~~l~~ei~~~~~~~~~~~~~g~~L~~~~~~~~~~~I~~~l~~L~~~w~~L~~~~~~R~~~Le~aL  106 (106)
T d1s35a1          34 AEQLLQQHAGIKDEIDGHQDSYQRVKESGEKVIQGQTDPEYLLLGQRLEGLDTGWDALGRMWESRSHTLAQCL  106 (106)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence            67899999999999999999999999999999987654 2       88999999999999999999999986

>d1cuna2 a.7.1.1 (A:116-219) Spectrin alpha chain {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: Spectrin repeat-like
superfamily: Spectrin repeat
family: Spectrin repeat
domain: Spectrin alpha chain
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.24  E-value=1.7e-11  Score=72.73  Aligned_cols=65  Identities=9%  Similarity=0.133  Sum_probs=61.8

Q ss_pred             HHHHHHHHHhhHHHHhhchHhHHHHHHHhhhhcCCCChH-------HHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10627          2 INKVYSILFSSQAEIDGRQETFKSLKEFGLKVSPPREPE-------LTKLDELRRQLASSWEEQRTRLDHAH   66 (92)
Q Consensus         2 ~e~ll~~Hq~~~~EI~~r~~~~~~l~~~G~~L~~~~h~e-------l~~L~~~~~~l~~~We~R~~~L~q~~   66 (92)
                      |+.++++|+.+..||+++.+.|..+...|..|+..+||+       +..|...|..|...|..|+..|++++
T Consensus        32 v~~ll~~h~~~~~ei~~~~~~~~~l~~~g~~L~~~~~~~~~~I~~~~~~l~~~w~~L~~~~~~R~~~Le~s~  103 (104)
T d1cuna2          32 IQGLLKKHEAFETDFTVHKDRVNDVCANGEDLIKKNNHHVENITAKMKGLKGKVSDLEKAAAQRKAKLDENS  103 (104)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence            688999999999999999999999999999999999983       99999999999999999999999875

>d1u5pa1 a.7.1.1 (A:1662-1771) Spectrin alpha chain {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: Spectrin repeat-like
superfamily: Spectrin repeat
family: Spectrin repeat
domain: Spectrin alpha chain
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.18  E-value=8.8e-11  Score=69.99  Aligned_cols=67  Identities=13%  Similarity=0.213  Sum_probs=63.3

Q ss_pred             HHHHHHHHHhhHHHHhhchHhHHHHHHHhhhhcCCCChH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10627          2 INKVYSILFSSQAEIDGRQETFKSLKEFGLKVSPPREPE-------LTKLDELRRQLASSWEEQRTRLDHAHQA   68 (92)
Q Consensus         2 ~e~ll~~Hq~~~~EI~~r~~~~~~l~~~G~~L~~~~h~e-------l~~L~~~~~~l~~~We~R~~~L~q~~~l   68 (92)
                      |+.++++|+.+..||+++.+.|+.|...|..|+..+|++       +..|..+|..|...|..|+..|++++.|
T Consensus        37 ~~~~~~~h~~~~~ei~~~~~~i~~l~~~~~~L~~~~~~~~~~i~~~~~~l~~~w~~l~~~~~~R~~~L~ea~~L  110 (110)
T d1u5pa1          37 VNNLLKKHQLLEADISAHEDRLKDLNSQADSLMTSSAFDTSQVKDKRETINGRFQRIKSMAAARRAKLNESHRL  110 (110)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSSCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence            688999999999999999999999999999999999873       9999999999999999999999999875

>d1quua2 a.7.1.1 (A:125-248) alpha-actinin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: Spectrin repeat-like
superfamily: Spectrin repeat
family: Spectrin repeat
domain: alpha-actinin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.10  E-value=7.2e-11  Score=72.00  Aligned_cols=70  Identities=10%  Similarity=0.014  Sum_probs=65.2

Q ss_pred             HHHHHHHHHhhHHHHhhchHhHHHHHHHhhhhcCCCChH--------------HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10627          2 INKVYSILFSSQAEIDGRQETFKSLKEFGLKVSPPREPE--------------LTKLDELRRQLASSWEEQRTRLDHAHQ   67 (92)
Q Consensus         2 ~e~ll~~Hq~~~~EI~~r~~~~~~l~~~G~~L~~~~h~e--------------l~~L~~~~~~l~~~We~R~~~L~q~~~   67 (92)
                      |+.|+++|..+..||.++++.+..+...|..|+..+|+.              +..|..+|..|...+..|+..|.+++.
T Consensus        40 v~~ll~kh~~fe~el~~~~~~v~~l~~~~~~L~~~~~~~~~~~~~~~~~i~~~~~~L~~~W~~L~~~~~~R~~~L~e~l~  119 (124)
T d1quua2          40 IQSLITAHEQFKATLPEADGERQSIMAIQNEVEKVIQSYNIRISSSNPYSTVTMDELRTKWDKVKQLVPIRDQSLQEELA  119 (124)
T ss_dssp             HHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHSCTTSCCSCTTCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            789999999999999999999999999999998766531              789999999999999999999999999


Q ss_pred             HHhh
Q psy10627         68 AQMF   71 (92)
Q Consensus        68 lq~F   71 (92)
                      .|+|
T Consensus       120 ~Qq~  123 (124)
T d1quua2         120 RQHA  123 (124)
T ss_dssp             HHSC
T ss_pred             HHhc
Confidence            9987

>d1quua1 a.7.1.1 (A:1-124) alpha-actinin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: Spectrin repeat-like
superfamily: Spectrin repeat
family: Spectrin repeat
domain: alpha-actinin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.07  E-value=4.5e-10  Score=68.15  Aligned_cols=67  Identities=7%  Similarity=0.156  Sum_probs=63.7

Q ss_pred             HHHHHHHHHhhHHHHhhchHhHHHHHHHhhhhcCCCChH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10627          2 INKVYSILFSSQAEIDGRQETFKSLKEFGLKVSPPREPE-------LTKLDELRRQLASSWEEQRTRLDHAHQA   68 (92)
Q Consensus         2 ~e~ll~~Hq~~~~EI~~r~~~~~~l~~~G~~L~~~~h~e-------l~~L~~~~~~l~~~We~R~~~L~q~~~l   68 (92)
                      |+.++++|+.+..+|.++.+.+..|...|+.|+..+||+       +..|..+|..|...+..|+..|.++.++
T Consensus        50 v~~l~~~h~~~~~~i~~~~~~v~~l~~~~~~L~~~~~~~~~~i~~~~~~l~~rW~~L~~~~~~R~~~L~~a~~l  123 (124)
T d1quua1          50 VRALLRKHEAFESDLAAHQDRVEQIAAIAQELNELDYHDAVNVNDRCQKICDQWDRLGTLTQKRREALERMEKL  123 (124)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            788999999999999999999999999999999999873       8899999999999999999999999876

>d1u5pa2 a.7.1.1 (A:1772-1872) Spectrin alpha chain {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: Spectrin repeat-like
superfamily: Spectrin repeat
family: Spectrin repeat
domain: Spectrin alpha chain
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.03  E-value=2.6e-10  Score=66.83  Aligned_cols=62  Identities=15%  Similarity=0.202  Sum_probs=58.1

Q ss_pred             HHHHHHHHHhhHHHHhhchHhHHHHHHHhhhhcCCCChH-------HHHHHHHHHHHHHHHHHHHHHHH
Q psy10627          2 INKVYSILFSSQAEIDGRQETFKSLKEFGLKVSPPREPE-------LTKLDELRRQLASSWEEQRTRLD   63 (92)
Q Consensus         2 ~e~ll~~Hq~~~~EI~~r~~~~~~l~~~G~~L~~~~h~e-------l~~L~~~~~~l~~~We~R~~~L~   63 (92)
                      |+.++++|..++.+|+++.+.+..|...|+.|+..+||+       +..|...|..|...|..|+..|+
T Consensus        33 ~~~ll~~h~~~~~~i~~~~~~~~~l~~~~~~l~~~~~~~~~~I~~~~~~l~~~w~~L~~~~~~R~~~Le  101 (101)
T d1u5pa2          33 VQNLRKKHKRLEAELAAHEPAIQGVLDTGKKLSDDNTIGKEEIQQRLAQFVDHWKELKQLAAARGQRLE  101 (101)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhCc
Confidence            688999999999999999999999999999999999873       99999999999999999998773

>d1s35a2 a.7.1.1 (A:1169-1273) Spectrin beta chain {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: Spectrin repeat-like
superfamily: Spectrin repeat
family: Spectrin repeat
domain: Spectrin beta chain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.99  E-value=1e-09  Score=64.90  Aligned_cols=63  Identities=10%  Similarity=0.053  Sum_probs=58.7

Q ss_pred             HHHHHHHHHhhHHHHhhchHhHHHHHHHhhhhcCCCChH-------HHHHHHHHHHHHHHHHHHHHHHHH
Q psy10627          2 INKVYSILFSSQAEIDGRQETFKSLKEFGLKVSPPREPE-------LTKLDELRRQLASSWEEQRTRLDH   64 (92)
Q Consensus         2 ~e~ll~~Hq~~~~EI~~r~~~~~~l~~~G~~L~~~~h~e-------l~~L~~~~~~l~~~We~R~~~L~q   64 (92)
                      |+.++++|..+..+|.++.+++..+...|..|+..+||+       +..|.++|..|.+.+++|+..|..
T Consensus        35 v~~l~k~h~~l~~~l~~~~~~v~~l~~~a~~L~~~~~~~~~~I~~~~~~l~~rw~~l~~~~~~r~~~L~d  104 (105)
T d1s35a2          35 AEAGIRKFEDFLGSMENNRDKVLSPVDSGNKLVAEGNLYSDKIKEKVQLIEDRHRKNNEKAQEASVLLRD  104 (105)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence            688999999999999999999999999999999999984       888999999999999999998863

>d2spca_ a.7.1.1 (A:) Spectrin alpha chain {Drosophila sp. [TaxId: 7242]}

class: All alpha proteins
fold: Spectrin repeat-like
superfamily: Spectrin repeat
family: Spectrin repeat
domain: Spectrin alpha chain
species: Drosophila sp. [TaxId: 7242]

Probab=98.93  E-value=7.6e-10  Score=65.30  Aligned_cols=62  Identities=16%  Similarity=0.210  Sum_probs=57.2

Q ss_pred             HHHHHHHHHhhHHHHhhchHhHHHHHHHhhhhcCCCChH-------HHHHHHHHHHHHHHHHHHHHHHH
Q psy10627          2 INKVYSILFSSQAEIDGRQETFKSLKEFGLKVSPPREPE-------LTKLDELRRQLASSWEEQRTRLD   63 (92)
Q Consensus         2 ~e~ll~~Hq~~~~EI~~r~~~~~~l~~~G~~L~~~~h~e-------l~~L~~~~~~l~~~We~R~~~L~   63 (92)
                      |+.++++|+.+..+|.++.+.|..+...|+.|+..+||+       +..|...|..|...+..|+..|.
T Consensus        38 ~~~l~~~h~~~~~ei~~~~~~~~~l~~~~~~L~~~~~~~~~~I~~~~~~l~~~w~~L~~~~~~r~~~Le  106 (107)
T d2spca_          38 VEALIKKHEDFDKAINGHEQKIAALQTVADQLIAQNHYASNLVDEKRKQVLERWRHLKEGLIEKRSRLG  106 (107)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhHcC
Confidence            789999999999999999999999999999999999874       88889999999999999988764

>d1hcia4 a.7.1.1 (A:633-746) alpha-actinin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: Spectrin repeat-like
superfamily: Spectrin repeat
family: Spectrin repeat
domain: alpha-actinin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.92  E-value=1.6e-09  Score=65.20  Aligned_cols=63  Identities=6%  Similarity=0.014  Sum_probs=59.3

Q ss_pred             HHHHHHHHHhhHHHHhhchHhHHHHHHHhhhhcCCCChH-------HHHHHHHHHHHHHHHHHHHHHHHH
Q psy10627          2 INKVYSILFSSQAEIDGRQETFKSLKEFGLKVSPPREPE-------LTKLDELRRQLASSWEEQRTRLDH   64 (92)
Q Consensus         2 ~e~ll~~Hq~~~~EI~~r~~~~~~l~~~G~~L~~~~h~e-------l~~L~~~~~~l~~~We~R~~~L~q   64 (92)
                      |+.++++|+.+.+||.++.+.|..|...|+.|+..+||+       +..|...|..|......|+..|+.
T Consensus        39 ve~~l~~h~~~e~el~~~~~~i~~l~~~g~~L~~~~~~~~~~i~~~~~~L~~~W~~L~~~~~~R~~~Le~  108 (114)
T d1hcia4          39 LEDQMNQLKQYEHNIINYKNNIDKLEGDHQLIQEALVFDNKHTNYTMEHIRVGWELLLTTIARTINEVET  108 (114)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCTTCSCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            678999999999999999999999999999999999873       999999999999999999988864

>d1owaa_ a.7.1.1 (A:) Spectrin alpha chain {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: Spectrin repeat-like
superfamily: Spectrin repeat
family: Spectrin repeat
domain: Spectrin alpha chain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.82  E-value=5.4e-09  Score=65.24  Aligned_cols=63  Identities=17%  Similarity=0.101  Sum_probs=58.5

Q ss_pred             CHHHHHHHHHhhHHHHhhchHhHHHHHHHhhhhcCCCChH-------HHHHHHHHHHHHHHHHHHHHHHH
Q psy10627          1 MINKVYSILFSSQAEIDGRQETFKSLKEFGLKVSPPREPE-------LTKLDELRRQLASSWEEQRTRLD   63 (92)
Q Consensus         1 ~~e~ll~~Hq~~~~EI~~r~~~~~~l~~~G~~L~~~~h~e-------l~~L~~~~~~l~~~We~R~~~L~   63 (92)
                      .|+.++++|+.+..||.++.+.|..+...|+.|+..+|++       +..|..+|..|...|..|...|.
T Consensus        86 ~~~~~~~~h~~l~~ei~~~~~~~~~l~~~g~~L~~~~~~~~~~i~~~l~~l~~~W~~L~~~~~~R~~~L~  155 (156)
T d1owaa_          86 NIQGKYQKHQSLEAEVQTKSRLMSELEKTREERFTMGHSAHEETKAHIEELRHLWDLLLELTLEKGDQLL  155 (156)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence            3788999999999999999999999999999999998763       89999999999999999998885

>d1owaa_ a.7.1.1 (A:) Spectrin alpha chain {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: Spectrin repeat-like
superfamily: Spectrin repeat
family: Spectrin repeat
domain: Spectrin alpha chain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.99  E-value=4.3e-07  Score=56.27  Aligned_cols=65  Identities=22%  Similarity=0.292  Sum_probs=53.9

Q ss_pred             HHHHhhhhcCCCCh--H-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHHHHhchhccc
Q psy10627         26 LKEFGLKVSPPREP--E-LTKLDELRRQLASSWEEQRTRLDHAHQAQMFKEAADQAENWLVTKEATEY   90 (92)
Q Consensus        26 l~~~G~~L~~~~h~--e-l~~L~~~~~~l~~~We~R~~~L~q~~~lq~F~rda~q~e~Wl~~qE~~L~   90 (92)
                      +...|..++.+...  + +..|..+|..|...+..|+..|+.++.++.|.++++.+.+||..++..+.
T Consensus        10 ~~~~g~~l~e~~~~i~~~~~~l~~rw~~L~~~~~~R~~~Le~~~~~~~F~~~~~~l~~Wl~e~e~~~~   77 (156)
T d1owaa_          10 VESSGPKVLETAEEIQERRQEVLTRYQSFKERVAERGQKLEDSYHLQVFKRDADDLGKWIMEKVNILT   77 (156)
T ss_dssp             TTSSSCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCSCSCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHhhhHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            34556666654321  1 89999999999999999999999999999999999999999998887654

>d1quua1 a.7.1.1 (A:1-124) alpha-actinin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: Spectrin repeat-like
superfamily: Spectrin repeat
family: Spectrin repeat
domain: alpha-actinin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.34  E-value=0.0014  Score=38.39  Aligned_cols=33  Identities=30%  Similarity=0.518  Sum_probs=26.3

Q ss_pred             HHHHHHHHHHHHHhhHHhHHHHHHHHHhchhcccC
Q psy10627         57 EQRTRLDHAHQAQMFKEAADQAENWLVTKEATEYR   91 (92)
Q Consensus        57 ~R~~~L~q~~~lq~F~rda~q~e~Wl~~qE~~L~~   91 (92)
                      .|...|...  ++.|.++|+.+.+||..++.+|.+
T Consensus         7 ~R~~~l~~~--~q~F~~~~~~l~~Wl~~~e~~l~~   39 (124)
T d1quua1           7 RRLERLEHL--AEKFRQKASTHETWAYGKEQILLQ   39 (124)
T ss_dssp             HHHHHHHHH--HHHHHHHHHHHHHHTTTHHHHHHC
T ss_pred             HHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhC
Confidence            355566544  589999999999999999988754

>d1quua2 a.7.1.1 (A:125-248) alpha-actinin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: Spectrin repeat-like
superfamily: Spectrin repeat
family: Spectrin repeat
domain: alpha-actinin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.08  E-value=0.0078  Score=35.05  Aligned_cols=25  Identities=16%  Similarity=0.155  Sum_probs=22.2

Q ss_pred             HHhhHHhHHHHHHHHHhchhcccCC
Q psy10627         68 AQMFKEAADQAENWLVTKEATEYRP   92 (92)
Q Consensus        68 lq~F~rda~q~e~Wl~~qE~~L~~~   92 (92)
                      +..|.++|+.+++||..+++.|.++
T Consensus         7 ~~~F~~~a~~l~~Wl~~~e~~l~~~   31 (124)
T d1quua2           7 HLEFAKRAAPFNNWMEGAMEDLQDM   31 (124)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTTCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            3489999999999999999998763

>d1hcia4 a.7.1.1 (A:633-746) alpha-actinin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: Spectrin repeat-like
superfamily: Spectrin repeat
family: Spectrin repeat
domain: alpha-actinin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.71  E-value=0.0068  Score=34.99  Aligned_cols=23  Identities=22%  Similarity=0.374  Sum_probs=20.7

Q ss_pred             HhhHHhHHHHHHHHHhchhcccC
Q psy10627         69 QMFKEAADQAENWLVTKEATEYR   91 (92)
Q Consensus        69 q~F~rda~q~e~Wl~~qE~~L~~   91 (92)
                      +.|.++|+.+++||..++..|++
T Consensus         8 ~~F~~~a~~~~~Wi~e~~~~l~~   30 (114)
T d1hcia4           8 RQFAAQANAIGPWIQNKMEEIAR   30 (114)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHh
Confidence            68999999999999999888754