Psyllid ID: psy10689

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------37
Protein Sequence
WKPPKNGRNLSKSGQNTAKRSNHLNQTLNGYNPGNAIVLIQLQPYEQLEKDVVVHVDVEKGHHWTTLSTIIGWIYFVSWGASAHCQVLVNWQRKSVIGLNFDYLGLNMIGHSLYGVYNFVLYFSYPVQEEYYLRNPHSANPIQLNDVVFSAHNSLVTLYTVYQCYKYERGNQRLSKGAKLLYTVYAVWVFLSGFLALVHKIHWLDFINQCALIKLTITLIKYAPQAYMNFKRKSTVGWSIGNVLLDFAGGLFSLLQMLILAYNFGKCKTLDSYWDQIHLSLIKTKFTLIFWAYMNFKRKSTVGWSIGNVLLDFAGGLFSLLQMLILAYNFDDWNSLLTDTTKLGLAAFTLMFDVLFLVQHYILYTDHDD
Secondary Structure (PSIPRED)
cccccccccEEEccccccccccEEEEEEEEcccEEEEEEEEEcccccccccEEEEEEEEcccHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHcccccccccccHHHHHHHHHHHHHEEEEEEEEEccccccccccHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHEEEEEEEcccccccccccEEcEEEEcHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHccHHHHHHHHHHHHccccccEEEccHHHHHHHHHHHHHHHHHHHEEEEEEccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccccccEEEEEEEEccccEEEEEEEEccccccccccEEEEEEEccHHHHHHHHHHHHHHHHHHHHccccHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHccHEEEEEcccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHcccHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccHccccHHHHHHHHHHHHHHHHHHHHHHEEcccccc
Coil and Loop (DISEMBL)
wkppkngrnlsksgqntakrsnhlnqtlngynpgNAIVLIQlqpyeqleKDVVVHVDVEKGHHWTTLSTIIGWIYFVSWGASAHCQVLVNWQRKSVIGLNFDYLGLNMIGHSLYGVYNFVLYFsypvqeeyylrnphsanpiqlndVVFSAHNSLVTLYTVYQCYkyergnqrlsKGAKLLYTVYAVWVFLSGFLALVHKIHWLDFINQCALIKLTITLIKYAPQAYMNFKRKSTVGWSIGNVLLDFAGGLFSLLQMLILAYNfgkcktldsyWDQIHLSLIKTKFTLIFWAYMNFKRKSTVGWSIGNVLLDFAGGLFSLLQMLILAYnfddwnslltdTTKLGLAAFTLMFDVLFLVQHYILYTDHDD
Flexible Loop (DISEMBL)
wkppkngrnlsksgqntaKRSNHLNQTLNGYNPGNAIVLIQLQPYEQLEKDVVVHVDVEKGHHWTTLSTIIGWIYFVSWGASAHCQVLVNWQRKSVIGLNFDYLGLNMIGHSLYGVYNFVLYFSYPVQEEYYLRNPHSANPIQLNDVVFSAHNSLVTLYTVYQCYKYERGNQRLSKGAKLLYTVYAVWVFLSGFLALVHKIHWLDFINQCALIKLTITLIKYAPQAYMNFKRKSTVGWSIGNVLLDFAGGLFSLLQMLILAYNFGKCKTLDSYWDQIHLSLIKTKFTLIFWAYMNFKRKSTVGWSIGNVLLDFAGGLFSLLQMLILAYNFDDWNSLLTDTTKLGLAAFTLMFDVLFLVQHYILYTDHDD
Low Complexity Region (SEG)
WKPPKNGRNLSKSGQNTAKRSNHLNQTLNGYNPGNAIVLIQLQPYEQLekdvvvhvdvekghHWTTLSTIIGWIYFVSWGASAHCQVLVNWQRKSVIGLNFDYLGLNMIGHSLYGVYNFVLYFSYPVQEEYYLRNPHSANPIQLNDVVFSAHNSLVTLYTVYQCYKYERGNQRLSKGAKLLYTVYAVWVFLSGFLALVHKIHWLDFINQCALIKLTITLIKYAPQAYMNFKRKSTVGWSIGNVLLDFAGGLFSLLQMLILAYNFGKCKTLDSYWDQIHLSLIKTKFTLIFWAYMNFKRKSTVGWSIGNVLLDFAGGLFSLLQMLILAYNFDDWNSLLTDTTKLGLAAFTLMFDVLFLVQHYILYTDHDD
Disordered region (IsUnstruct)
***************************LNGYNPGNAIVLIQLQPYEQLEKDVVVHVDVEKGHHWTTLSTIIGWIYFVSWGASAHCQVLVNWQRKSVIGLNFDYLGLNMIGHSLYGVYNFVLYFSYPVQEEYYLRNPHSANPIQLNDVVFSAHNSLVTLYTVYQCYKYERGNQRLSKGAKLLYTVYAVWVFLSGFLALVHKIHWLDFINQCALIKLTITLIKYAPQAYMNFKRKSTVGWSIGNVLLDFAGGLFSLLQMLILAYNFGKCKTLDSYWDQIHLSLIKTKFTLIFWAYMNFKRKSTVGWSIGNVLLDFAGGLFSLLQMLILAYNFDDWNSLLTDTTKLGLAAFTLMFDVLFLVQHYILYT****
Disordered Region (DISOPRED)
**********************HLNQTLNGYNPGNAIVLIQLQPYEQLEKDVVVHVDVEKGHHWTTLSTIIGWIYFVSWGASAHCQVLVNWQRKSVIGLNFDYLGLNMIGHSLYGVYNFVLYFSYPVQEEYYLRNPHSANPIQLNDVVFSAHNSLVTLYTVYQCYKYERGNQRLSKGAKLLYTVYAVWVFLSGFLALVHKIHWLDFINQCALIKLTITLIKYAPQAYMNFKRKSTVGWSIGNVLLDFAGGLFSLLQMLILAYNFGKCKTLDSYWDQIHLSLIKTKFTLIFWAYMNFKRKSTVGWSIGNVLLDFAGGLFSLLQMLILAYNFDDWNSLLTDTTKLGLAAFTLMFDVLFLVQHYILYTD***
Disordered Region (DISEMBL)
******************KRSNHLNQTLNGYNPGNAIVLIQLQPYEQLEKDVVVHVDVEKGHHWTTLSTIIGWIYFVSWGASAHCQVLVNWQRKSVIGLNFDYLGLNMIGHSLYGVYNFVLYFSYPVQEEYYLRNPHSANPIQLNDVVFSAHNSLVTLYTVYQCYKYERGNQRLSKGAKLLYTVYAVWVFLSGFLALVHKIHWLDFINQCALIKLTITLIKYAPQAYMNFKRKSTVGWSIGNVLLDFAGGLFSLLQMLILAYNFGKCKTLDSYWDQIHLSLIKTKFTLIFWAYMNFKRKSTVGWSIGNVLLDFAGGLFSLLQMLILAYNFDDWNSLLTDTTKLGLAAFTLMFDVLFLVQHYILYTDHDD
Disordered Region (DISPRO)
WKP*KNGRNLSK*******RSNHLNQTLNGYNPGNAIVLIQLQPYEQLEKDVVVHVDVEKGHHWTTLSTIIGWIYFVSWGASAHCQVLVNWQRKSVIGLNFDYLGLNMIGHSLYGVYNFVLYFSYPVQEEYYLRNPHSANPIQLNDVVFSAHNSLVTLYTVYQCYKYERGNQRLSKGAKLLYTVYAVWVFLSGFLALVHKIHWLDFINQCALIKLTITLIKYAPQAYMNFKRKSTVGWSIGNVLLDFAGGLFSLLQMLILAYNFGKCKTLDSYWDQIHLSLIKTKFTLIFWAYMNFKRKSTVGWSIGNVLLDFAGGLFSLLQMLILAYNFDDWNSLLTDTTKLGLAAFTLMFDVLFLVQHYILYTD***
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiii
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiii
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
WKPPKNGRNLSKSGQNTAKRSNHLNQTLNGYNPGNAIVLIQLQPYEQLEKDVVVHVDVEKGHHWTTLSTIIGWIYFVSWGASAHCQVLVNWQRKSVIGLNFDYLGLNMIGHSLYGVYNFVLYFSYPVQEEYYLRNPHSANPIQLNDVVFSAHNSLVTLYTVYQCYKYERGNQRLSKGAKLLYTVYAVWVFLSGFLALVHKIHWLDFINQCALIKLTITLIKYAPQAYMNFKRKSTVGWSIGNVLLDFAGGLFSLLQMLILAYNFGKCKTLDSYWDQIHLSLIKTKFTLIFWAYMNFKRKSTVGWSIGNVLLDFAGGLFSLLQMLILAYNFDDWNSLLTDTTKLGLAAFTLMFDVLFLVQHYILYTDHDD
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	369	2.2.26 [Sep-21-2011]
Q9VCR7	397	Cystinosin homolog OS=Dro	yes	N/A	0.669	0.622	0.463	8e-58
Q09500	404	Cystinosin homolog OS=Cae	yes	N/A	0.653	0.596	0.398	3e-49
A7MB63	367	Cystinosin OS=Bos taurus	yes	N/A	0.531	0.534	0.472	7e-48
O60931	367	Cystinosin OS=Homo sapien	yes	N/A	0.558	0.561	0.470	1e-47
P57757	367	Cystinosin OS=Mus musculu	yes	N/A	0.539	0.542	0.492	5e-47
A8WN56	403	Cystinosin homolog OS=Cae	N/A	N/A	0.720	0.660	0.377	2e-46
Q54WT7	284	Cystinosin homolog OS=Dic	yes	N/A	0.590	0.767	0.424	6e-41
P57758	270	Cystinosin homolog OS=Ara	yes	N/A	0.593	0.811	0.426	1e-40
P17261	260	Cystine transporter OS=Sa	yes	N/A	0.596	0.846	0.255	4e-11

>sp|Q9VCR7|CTNS_DROME Cystinosin homolog OS=Drosophila melanogaster GN=CG17119 PE=1 SV=2

 Score =  224 bits (571), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 115/248 (46%), Positives = 158/248 (63%), Gaps = 1/248 (0%)

Query: 18  AKRSNHLNQTLNGYNPGNA-IVLIQLQPYEQLEKDVVVHVDVEKGHHWTTLSTIIGWIYF 76
           A  + + +  + G   GN  +V       +++ KDV V V V K       S I GW+YF
Sbjct: 81  AGSTRNQSVVITGLKAGNVKVVADSDDANKEIVKDVFVRVTVAKSRALIYTSIIFGWVYF 140

Query: 77  VSWGASAHCQVLVNWQRKSVIGLNFDYLGLNMIGHSLYGVYNFVLYFSYPVQEEYYLRNP 136
           V+W  S + Q+  N++RKSV GLNFD+L LN++G +LY ++N  LYF   +Q EY +R P
Sbjct: 141 VAWSVSFYPQIWSNYRRKSVEGLNFDFLALNIVGFTLYSMFNCGLYFIEDLQNEYEVRYP 200

Query: 137 HSANPIQLNDVVFSAHNSLVTLYTVYQCYKYERGNQRLSKGAKLLYTVYAVWVFLSGFLA 196
              NP+ LNDVVFS H    T  T+ QC+ Y+R  QR+S  A  +  ++AV V +S  LA
Sbjct: 201 LGVNPVMLNDVVFSLHAMFATCITILQCFFYQRAQQRVSFIAYGILAIFAVVVVVSAGLA 260

Query: 197 LVHKIHWLDFINQCALIKLTITLIKYAPQAYMNFKRKSTVGWSIGNVLLDFAGGLFSLLQ 256
               IHWLDF+  C+ +KLTIT+IKY PQA MN++RKST GWSIGN+LLDF GG  S+LQ
Sbjct: 261 GGSVIHWLDFLYYCSYVKLTITIIKYVPQALMNYRRKSTSGWSIGNILLDFTGGTLSMLQ 320

Query: 257 MLILAYNF 264
           M++ A+N+
Sbjct: 321 MILNAHNY 328

Thought to transport cystine out of lysosomes.
Drosophila melanogaster (taxid: 7227)

>sp|Q09500|CTNS_CAEEL Cystinosin homolog OS=Caenorhabditis elegans GN=ctns-1 PE=3 SV=2

 Score =  196 bits (497), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 96/241 (39%), Positives = 139/241 (57%)

Query: 50  KDVVVHVDVEKGHHWTTLSTIIGWIYFVSWGASAHCQVLVNWQRKSVIGLNFDYLGLNMI 109
           +D    + V + H    L  I+GW YF +W  S + Q+ +N++RKSV+GLNFD+L LN++
Sbjct: 111 EDAFARITVIRSHFLAILIQIVGWTYFFAWSISFYPQMYLNFKRKSVVGLNFDFLSLNLV 170

Query: 110 GHSLYGVYNFVLYFSYPVQEEYYLRNPHSANPIQLNDVVFSAHNSLVTLYTVYQCYKYER 169
           G   Y ++N ++Y++  V+ EY + NP S  P+ LNDVVF+ H  L    T+ QC  YER
Sbjct: 171 GFCAYAIFNLLMYYNSHVKNEYNIVNPRSPPPVLLNDVVFAVHAFLACFITILQCLFYER 230

Query: 170 GNQRLSKGAKLLYTVYAVWVFLSGFLALVHKIHWLDFINQCALIKLTITLIKYAPQAYMN 229
            NQ +S     L  V   + F S    ++ KI  L F+   + IK+ +T  KY PQAY N
Sbjct: 231 DNQSVSSKCIALMIVLISFGFCSAAATVLRKIQLLSFVTSLSYIKMAVTCCKYFPQAYFN 290

Query: 230 FKRKSTVGWSIGNVLLDFAGGLFSLLQMLILAYNFGKCKTLDSYWDQIHLSLIKTKFTLI 289
           + RKSTVGWSIGN++LDF GG   +LQM++ A N        +   +  L  +   F +I
Sbjct: 291 YTRKSTVGWSIGNIMLDFTGGTLDILQMILQAVNVNDWSAFYANPVKFGLGFVSIFFDII 350

Query: 290 F 290
           F
Sbjct: 351 F 351

Thought to transport cystine out of lysosomes (By similarity). May play a role in the degradation of engulfed apoptotic cells.

Caenorhabditis elegans (taxid: 6239)

>sp|A7MB63|CTNS_BOVIN Cystinosin OS=Bos taurus GN=CTNS PE=2 SV=1

 Score =  191 bits (485), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 94/199 (47%), Positives = 134/199 (67%)

Query: 65  TTLSTIIGWIYFVSWGASAHCQVLVNWQRKSVIGLNFDYLGLNMIGHSLYGVYNFVLYFS 124
           + ++ +IGWIYFV+W  S + QV+ NW+RKSV+GL+FD++ LN++G   Y V+N  L++ 
Sbjct: 124 SIINQVIGWIYFVAWSVSFYPQVITNWRRKSVVGLSFDFVVLNLMGFVAYSVFNIGLFWV 183

Query: 125 YPVQEEYYLRNPHSANPIQLNDVVFSAHNSLVTLYTVYQCYKYERGNQRLSKGAKLLYTV 184
             ++E++ L+ P+  NP+  NDV FS H   +TL  + QC  YERG+QR+S  A     +
Sbjct: 184 PSIKEQFLLKYPNGVNPVDSNDVFFSLHAVALTLVVIVQCLLYERGSQRVSWLAISFLVL 243

Query: 185 YAVWVFLSGFLALVHKIHWLDFINQCALIKLTITLIKYAPQAYMNFKRKSTVGWSIGNVL 244
             ++  ++  +A V    WL F+   + IKL +TL+KY PQAYMNF  KST GWSIGNVL
Sbjct: 244 SWLFTLIALIMAAVGATTWLQFLFCFSYIKLAVTLVKYFPQAYMNFHYKSTEGWSIGNVL 303

Query: 245 LDFAGGLFSLLQMLILAYN 263
           LDF GG FSLLQM + +YN
Sbjct: 304 LDFTGGSFSLLQMFLQSYN 322

Thought to transport cystine out of lysosomes.

Bos taurus (taxid: 9913)

>sp|O60931|CTNS_HUMAN Cystinosin OS=Homo sapiens GN=CTNS PE=1 SV=2

 Score =  191 bits (484), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 97/206 (47%), Positives = 136/206 (66%)

Query: 58  VEKGHHWTTLSTIIGWIYFVSWGASAHCQVLVNWQRKSVIGLNFDYLGLNMIGHSLYGVY 117
           V +    + ++ +IGWIYFV+W  S + QV++NW+RKSVIGL+FD++ LN+ G   Y V+
Sbjct: 117 VIRSSAISIINQVIGWIYFVAWSISFYPQVIMNWRRKSVIGLSFDFVALNLTGFVAYSVF 176

Query: 118 NFVLYFSYPVQEEYYLRNPHSANPIQLNDVVFSAHNSLVTLYTVYQCYKYERGNQRLSKG 177
           N  L +   ++E++ L+ P+  NP+  NDV FS H  ++TL  + QC  YERG QR+S  
Sbjct: 177 NIGLLWVPYIKEQFLLKYPNGVNPVNSNDVFFSLHAVVLTLIIIVQCCLYERGGQRVSWP 236

Query: 178 AKLLYTVYAVWVFLSGFLALVHKIHWLDFINQCALIKLTITLIKYAPQAYMNFKRKSTVG 237
           A     +  ++ F++  +A V    WL F+   + IKL +TL+KY PQAYMNF  KST G
Sbjct: 237 AIGFLVLAWLFAFVTMIVAAVGVTTWLQFLFCFSYIKLAVTLVKYFPQAYMNFYYKSTEG 296

Query: 238 WSIGNVLLDFAGGLFSLLQMLILAYN 263
           WSIGNVLLDF GG FSLLQM + +YN
Sbjct: 297 WSIGNVLLDFTGGSFSLLQMFLQSYN 322

Thought to transport cystine out of lysosomes.

Homo sapiens (taxid: 9606)

>sp|P57757|CTNS_MOUSE Cystinosin OS=Mus musculus GN=Ctns PE=1 SV=1

 Score =  188 bits (478), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 98/199 (49%), Positives = 131/199 (65%)

Query: 65  TTLSTIIGWIYFVSWGASAHCQVLVNWQRKSVIGLNFDYLGLNMIGHSLYGVYNFVLYFS 124
           + ++ +IGWIYF++W  S + QV+ NW+RKSVIGL+FD+L LN+ G   Y V+N  L + 
Sbjct: 124 SIINQVIGWIYFMAWSVSFYPQVIQNWRRKSVIGLSFDFLALNLTGFVAYSVFNIGLLWV 183

Query: 125 YPVQEEYYLRNPHSANPIQLNDVVFSAHNSLVTLYTVYQCYKYERGNQRLSKGAKLLYTV 184
             +QEE+ L+ P+  NP+  ND  FS H   +TL  + QC  YERGNQR+S  +     +
Sbjct: 184 PYIQEEFLLKYPNGVNPVDSNDAFFSLHAVALTLIVILQCCLYERGNQRVSWPSIGFLVL 243

Query: 185 YAVWVFLSGFLALVHKIHWLDFINQCALIKLTITLIKYAPQAYMNFKRKSTVGWSIGNVL 244
             ++V ++  +A V    WL F+   + IKL ITLIKY PQAYMNF  KST GWSIG VL
Sbjct: 244 AWLFVLVTMIVAAVGITTWLQFLFCFSYIKLIITLIKYFPQAYMNFYYKSTKGWSIGGVL 303

Query: 245 LDFAGGLFSLLQMLILAYN 263
           LDF GG FSLLQM + +YN
Sbjct: 304 LDFTGGSFSLLQMFLQSYN 322

Thought to transport cystine out of lysosomes.

Mus musculus (taxid: 10090)

>sp|A8WN56|CTNS_CAEBR Cystinosin homolog OS=Caenorhabditis briggsae GN=ctns-1 PE=3 SV=1

 Score =  187 bits (474), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 103/273 (37%), Positives = 153/273 (56%), Gaps = 7/273 (2%)

Query: 25  NQTLNGYNPGNAIVLIQLQPYEQLEK-------DVVVHVDVEKGHHWTTLSTIIGWIYFV 77
           N T++G  P    +L  L      E+       D    + V + H    L  I+GW YF 
Sbjct: 78  NVTVSGERPVAGEILEALNCTTDGEEVCSLDLLDAYSRITVIRSHWLAILIQIVGWTYFA 137

Query: 78  SWGASAHCQVLVNWQRKSVIGLNFDYLGLNMIGHSLYGVYNFVLYFSYPVQEEYYLRNPH 137
           +W  S + Q+ +N++RKSV+GLNFD+L LN++G   Y ++N ++Y++  V+  Y + NP 
Sbjct: 138 AWSVSFYPQMYLNFKRKSVVGLNFDFLSLNLVGFGAYAMFNLLMYYNSHVKNIYSMENPR 197

Query: 138 SANPIQLNDVVFSAHNSLVTLYTVYQCYKYERGNQRLSKGAKLLYTVYAVWVFLSGFLAL 197
           S  P+ LNDVVF+ H  L    T+ QC  YER  QR+S    +L      + F+S  + +
Sbjct: 198 SPPPVLLNDVVFAVHAFLACFVTILQCIFYERDQQRISTKCIILIIGLVSFGFVSVVVTV 257

Query: 198 VHKIHWLDFINQCALIKLTITLIKYAPQAYMNFKRKSTVGWSIGNVLLDFAGGLFSLLQM 257
           ++KI  LDF+   + IK+ +T  KY PQAY N++RKSTVGWSIGN+LLDF GG   +LQM
Sbjct: 258 LNKITILDFVVSLSYIKMAVTCCKYFPQAYFNYQRKSTVGWSIGNILLDFTGGSLDILQM 317

Query: 258 LILAYNFGKCKTLDSYWDQIHLSLIKTKFTLIF 290
           ++ A N        +   +  L  +   F +IF
Sbjct: 318 VLQAINVNDWSAFYANPVKFGLGFVSIFFDIIF 350

Thought to transport cystine out of lysosomes. May play a role in the degradation of engulfed apoptotic cells.

Caenorhabditis briggsae (taxid: 6238)

>sp|Q54WT7|CTNS_DICDI Cystinosin homolog OS=Dictyostelium discoideum GN=ctns PE=3 SV=1

 Score =  168 bits (426), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 93/219 (42%), Positives = 135/219 (61%), Gaps = 1/219 (0%)

Query: 72  GWIYFVSWGASAHCQVLVNWQRKSVIGLNFDYLGLNMIGHSLYGVYNFVLYFSYPVQEEY 131
           GWIYF  W  S + QV++N+++K+VIGL+FD+L  N+ G++ Y V+N VLYF   V+ EY
Sbjct: 12  GWIYFACWSLSFYPQVILNFRKKNVIGLSFDFLLFNITGYACYSVFNSVLYFDKLVKNEY 71

Query: 132 YLRNPHSANPIQLNDVVFSAHNSLVTLYTVYQCYKYERGNQRLSKGAKLLYTVYAVWVFL 191
           Y +      P+Q +D+ F+ H  ++T  T+ QC+ Y+RGNQ+ SK    + T+  V + +
Sbjct: 72  YDKYGPPI-PVQQSDIAFAIHGFVLTAITIIQCFIYDRGNQKNSKLGIGIATLIWVSLIV 130

Query: 192 SGFLALVHKIHWLDFINQCALIKLTITLIKYAPQAYMNFKRKSTVGWSIGNVLLDFAGGL 251
              L   +   WL  IN  + +KL IT IKY PQAY+NFK KST GWS+ NVLLDF+GG+
Sbjct: 131 MTILGFSNVFTWLWVINYYSYVKLFITFIKYIPQAYLNFKNKSTSGWSVHNVLLDFSGGV 190

Query: 252 FSLLQMLILAYNFGKCKTLDSYWDQIHLSLIKTKFTLIF 290
            SLLQM +   + G          ++ LSL    F ++F
Sbjct: 191 LSLLQMFLDVADSGNWNIFTGDPVKLGLSLFSIAFDILF 229

Thought to transport cystine out of lysosomes.

Dictyostelium discoideum (taxid: 44689)

>sp|P57758|CTNS_ARATH Cystinosin homolog OS=Arabidopsis thaliana GN=At5g40670 PE=2 SV=1

 Score =  167 bits (422), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 95/223 (42%), Positives = 137/223 (61%), Gaps = 4/223 (1%)

Query: 70  IIGWIYFVSWGASAHCQVLVNWQRKSVIGLNFDYLGLNMIGHSLYGVYNFVLYFSYPVQE 129
           I+GWI F SW  S + Q+++N++R+SV+GLNFD++ LN+  HS Y +YN  LYFS  +Q+
Sbjct: 15  IVGWIAFASWSISFYPQLILNFRRRSVVGLNFDFVMLNLTKHSSYMIYNVCLYFSPVIQK 74

Query: 130 EYY-LRNPHSANPIQLNDVVFSAHNSLVTLYTVYQCYKYERGNQRLSKGAKLLYTVYAVW 188
           +Y+         P+  NDV FS H  ++T  T++Q + YERG Q++S+ A  +  V  VW
Sbjct: 75  QYFDTYGDKEMIPVAANDVAFSIHAVVMTAVTLFQIFIYERGPQKVSRLA--IGIVVVVW 132

Query: 189 VFLSGFLALVHKIH-WLDFINQCALIKLTITLIKYAPQAYMNFKRKSTVGWSIGNVLLDF 247
            F +    +    H WL  I+    I++ +T +KY PQA MNF RKSTVGWSIGN+LLDF
Sbjct: 133 GFAAICFFIALPTHSWLWLISIFNSIQVFMTCVKYIPQAKMNFTRKSTVGWSIGNILLDF 192

Query: 248 AGGLFSLLQMLILAYNFGKCKTLDSYWDQIHLSLIKTKFTLIF 290
            GGL + LQM+I + +    K       +  LSLI   F ++F
Sbjct: 193 TGGLANYLQMVIQSIDQNSWKNFYGNMGKTLLSLISIFFDILF 235

Thought to transport cystine out of lysosomes.

Arabidopsis thaliana (taxid: 3702)

>sp|P17261|ERS1_YEAST Cystine transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ERS1 PE=1 SV=1

 Score = 69.3 bits (168), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 62/243 (25%), Positives = 114/243 (46%), Gaps = 23/243 (9%)

Query: 66  TLSTIIGWIYFVSWGASAHCQVLVNWQRKSVIGLNFDYLGLNMIGHSLYGVYNFVLYFSY 125
           +L  I+G +Y  SW  S +  ++ NW+ KS   ++ D++ LN  G+S   +  F+  + +
Sbjct: 3   SLDDILGIVYVTSWSISMYPPIITNWRHKSASAISMDFVMLNTAGYSYLVISIFLQLYCW 62

Query: 126 PVQ-EEYYLRNPHSANPIQLNDVVFSAHNSLVTLYTVYQCYKYER-------GNQRLSK- 176
            +  +E  L  P     +   D  +  H  L+ +  + Q     R       G+++++  
Sbjct: 63  KMTGDESDLGRPK----LTQFDFWYCLHGCLMNVVLLTQVVAGARIWRFPGKGHRKMNPW 118

Query: 177 ------GAKLLYTVYAVWVFLSGFLALVHKIHWLDFINQCALIKLTITLIKYAPQAYMNF 230
                  +  ++++  V    S +    H    L + N   L+K++++LIKY PQ   N 
Sbjct: 119 YLRILLASLAIFSLLTVQFMYSNYWYDWHNSRTLAYCNNLFLLKISMSLIKYIPQVTHNS 178

Query: 231 KRKSTVGWSIGNVLLDFAGGLFSLLQMLILAYNFGKCKTLDSY---WDQIHLSLIKTKFT 287
            RKS   + I  V LD  GG+ SLLQ LI   +  +  +LD++   + ++ LS++   F 
Sbjct: 179 TRKSMDCFPIQGVFLDVTGGIASLLQ-LIWQLSNDQGFSLDTFVTNFGKVGLSMVTLIFN 237

Query: 288 LIF 290
            IF
Sbjct: 238 FIF 240

Transport cystine out of vacuoles/endodomes.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	369
270014202	367	hypothetical protein TcasGA2_TC016287 [T	0.655	0.659	0.473	5e-63
189241049	500	PREDICTED: similar to CG17119 CG17119-PA	0.574	0.424	0.525	2e-62
350425469	462	PREDICTED: cystinosin homolog isoform 2	0.658	0.525	0.450	4e-61
350425466	397	PREDICTED: cystinosin homolog isoform 1	0.764	0.710	0.409	4e-61
340727715	462	PREDICTED: cystinosin homolog [Bombus te	0.658	0.525	0.450	1e-60
345483519	469	PREDICTED: cystinosin homolog isoform 4	0.707	0.556	0.423	5e-60
357620442	390	hypothetical protein KGM_12961 [Danaus p	0.636	0.602	0.5	5e-60
345483517	370	PREDICTED: cystinosin homolog isoform 3	0.707	0.705	0.423	6e-60
345483513	382	PREDICTED: cystinosin homolog isoform 1	0.707	0.683	0.423	6e-60
195450813	361	GK13579 [Drosophila willistoni] gi|19416	0.585	0.598	0.506	3e-59

>gi|270014202|gb|EFA10650.1| hypothetical protein TcasGA2_TC016287 [Tribolium castaneum]

 Score =  247 bits (631), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 116/245 (47%), Positives = 166/245 (67%)

Query: 20  RSNHLNQTLNGYNPGNAIVLIQLQPYEQLEKDVVVHVDVEKGHHWTTLSTIIGWIYFVSW 79
           +   +N  ++    G++ V+          +   V V V+K     T S +IGWIYFV+W
Sbjct: 81  KDEDVNIIVHAIGAGHSEVVANATNSSITVRKAFVRVTVQKHPELDTFSLVIGWIYFVAW 140

Query: 80  GASAHCQVLVNWQRKSVIGLNFDYLGLNMIGHSLYGVYNFVLYFSYPVQEEYYLRNPHSA 139
             S + Q+ VN+QRKSV+GLNFD+L LN+IG +LY V+N  LYF   ++ EY  R P   
Sbjct: 141 SISFYPQIYVNFQRKSVVGLNFDFLALNIIGFTLYAVFNLGLYFIPEIKAEYSNRYPRGL 200

Query: 140 NPIQLNDVVFSAHNSLVTLYTVYQCYKYERGNQRLSKGAKLLYTVYAVWVFLSGFLALVH 199
           NP+Q+ND+VF+ H +  T+ T+ QCY YER +QR+S  A+++  V+ +++F+   LA   
Sbjct: 201 NPVQVNDIVFAVHAAAATIITIVQCYLYERSDQRVSHVARIIIGVFGLFLFIGIILAASD 260

Query: 200 KIHWLDFINQCALIKLTITLIKYAPQAYMNFKRKSTVGWSIGNVLLDFAGGLFSLLQMLI 259
            IHWLDF+  C+ +KLTITLIKY PQAYMN+KR+STVGWSIGN+ LDF GG+ S+LQM+I
Sbjct: 261 VIHWLDFLYYCSYVKLTITLIKYVPQAYMNYKRQSTVGWSIGNIFLDFTGGILSMLQMII 320

Query: 260 LAYNF 264
           ++YN+
Sbjct: 321 ISYNY 325

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|189241049|ref|XP_967463.2| PREDICTED: similar to CG17119 CG17119-PA [Tribolium castaneum]

 Score =  246 bits (627), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 113/215 (52%), Positives = 156/215 (72%)

Query: 50  KDVVVHVDVEKGHHWTTLSTIIGWIYFVSWGASAHCQVLVNWQRKSVIGLNFDYLGLNMI 109
           +   V V V+K     T S +IGWIYFV+W  S + Q+ VN+QRKSV+GLNFD+L LN+I
Sbjct: 244 RKAFVRVTVQKHPELDTFSLVIGWIYFVAWSISFYPQIYVNFQRKSVVGLNFDFLALNII 303

Query: 110 GHSLYGVYNFVLYFSYPVQEEYYLRNPHSANPIQLNDVVFSAHNSLVTLYTVYQCYKYER 169
           G +LY V+N  LYF   ++ EY  R P   NP+Q+ND+VF+ H +  T+ T+ QCY YER
Sbjct: 304 GFTLYAVFNLGLYFIPEIKAEYSNRYPRGLNPVQVNDIVFAVHAAAATIITIVQCYLYER 363

Query: 170 GNQRLSKGAKLLYTVYAVWVFLSGFLALVHKIHWLDFINQCALIKLTITLIKYAPQAYMN 229
            +QR+S  A+++  V+ +++F+   LA    IHWLDF+  C+ +KLTITLIKY PQAYMN
Sbjct: 364 SDQRVSHVARIIIGVFGLFLFIGIILAASDVIHWLDFLYYCSYVKLTITLIKYVPQAYMN 423

Query: 230 FKRKSTVGWSIGNVLLDFAGGLFSLLQMLILAYNF 264
           +KR+STVGWSIGN+ LDF GG+ S+LQM+I++YN+
Sbjct: 424 YKRQSTVGWSIGNIFLDFTGGILSMLQMIIISYNY 458

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350425469|ref|XP_003494131.1| PREDICTED: cystinosin homolog isoform 2 [Bombus impatiens]

 Score =  241 bits (615), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 110/244 (45%), Positives = 171/244 (70%), Gaps = 1/244 (0%)

Query: 28  LNGYNPGNAIVLIQLQPYEQLE-KDVVVHVDVEKGHHWTTLSTIIGWIYFVSWGASAHCQ 86
           +NG + G++I+ + + P    +     V V +EK      +ST++GWIYF++W  S + Q
Sbjct: 85  INGRSAGHSIISLNVTPNNVTDYSQAFVRVTIEKSDTLYHISTVVGWIYFLAWSVSFYPQ 144

Query: 87  VLVNWQRKSVIGLNFDYLGLNMIGHSLYGVYNFVLYFSYPVQEEYYLRNPHSANPIQLND 146
           +  N++RKSV+GLNFDYL LN++G  LY ++N  LY+   V+ EY+ R P   NP+Q+ND
Sbjct: 145 IYSNYKRKSVVGLNFDYLSLNLVGFILYALFNCGLYWIPEVELEYFRRYPKGLNPVQVND 204

Query: 147 VVFSAHNSLVTLYTVYQCYKYERGNQRLSKGAKLLYTVYAVWVFLSGFLALVHKIHWLDF 206
           + F+ H +  T+ T+ QC+ YE GNQR+S  A++++ ++ V++ +S  LA+V  I+WLDF
Sbjct: 205 IFFALHATFATVITIIQCFIYEAGNQRVSTTARIIHGIFVVFILISMILAIVTTINWLDF 264

Query: 207 INQCALIKLTITLIKYAPQAYMNFKRKSTVGWSIGNVLLDFAGGLFSLLQMLILAYNFGK 266
           +  C+ +KL+ITLIKY PQA+ N+KRKSTVGWSIGN+ LDF GG+ S+LQM++ AYN+  
Sbjct: 265 LYYCSYVKLSITLIKYVPQAFYNYKRKSTVGWSIGNIFLDFTGGMLSMLQMILNAYNYDD 324

Query: 267 CKTL 270
            +++
Sbjct: 325 WESI 328

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350425466|ref|XP_003494130.1| PREDICTED: cystinosin homolog isoform 1 [Bombus impatiens]

 Score =  241 bits (615), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 117/286 (40%), Positives = 186/286 (65%), Gaps = 4/286 (1%)

Query: 6   NGRNLSKSGQNTAKRSNHLNQTLNGYNPGNAIVLIQLQPYEQLE-KDVVVHVDVEKGHHW 64
           N  ++  +  +T K+ + L   +NG + G++I+ + + P    +     V V +EK    
Sbjct: 66  NTSSIYITKNDTKKKWDIL---INGRSAGHSIISLNVTPNNVTDYSQAFVRVTIEKSDTL 122

Query: 65  TTLSTIIGWIYFVSWGASAHCQVLVNWQRKSVIGLNFDYLGLNMIGHSLYGVYNFVLYFS 124
             +ST++GWIYF++W  S + Q+  N++RKSV+GLNFDYL LN++G  LY ++N  LY+ 
Sbjct: 123 YHISTVVGWIYFLAWSVSFYPQIYSNYKRKSVVGLNFDYLSLNLVGFILYALFNCGLYWI 182

Query: 125 YPVQEEYYLRNPHSANPIQLNDVVFSAHNSLVTLYTVYQCYKYERGNQRLSKGAKLLYTV 184
             V+ EY+ R P   NP+Q+ND+ F+ H +  T+ T+ QC+ YE GNQR+S  A++++ +
Sbjct: 183 PEVELEYFRRYPKGLNPVQVNDIFFALHATFATVITIIQCFIYEAGNQRVSTTARIIHGI 242

Query: 185 YAVWVFLSGFLALVHKIHWLDFINQCALIKLTITLIKYAPQAYMNFKRKSTVGWSIGNVL 244
           + V++ +S  LA+V  I+WLDF+  C+ +KL+ITLIKY PQA+ N+KRKSTVGWSIGN+ 
Sbjct: 243 FVVFILISMILAIVTTINWLDFLYYCSYVKLSITLIKYVPQAFYNYKRKSTVGWSIGNIF 302

Query: 245 LDFAGGLFSLLQMLILAYNFGKCKTLDSYWDQIHLSLIKTKFTLIF 290
           LDF GG+ S+LQM++ AYN+   +++     +  L      F + F
Sbjct: 303 LDFTGGMLSMLQMILNAYNYDDWESIFGDPTKFGLGFFSVAFDIFF 348

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340727715|ref|XP_003402183.1| PREDICTED: cystinosin homolog [Bombus terrestris]

 Score =  239 bits (611), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 110/244 (45%), Positives = 170/244 (69%), Gaps = 1/244 (0%)

Query: 28  LNGYNPGNAIVLIQLQPYEQLE-KDVVVHVDVEKGHHWTTLSTIIGWIYFVSWGASAHCQ 86
           +NG + G++I+ + + P    +     V V +EK      +ST++GWIYF++W  S + Q
Sbjct: 85  INGRSAGHSIISLNVTPNNVTDYSQAFVRVTIEKSDILYHISTVVGWIYFLAWSVSFYPQ 144

Query: 87  VLVNWQRKSVIGLNFDYLGLNMIGHSLYGVYNFVLYFSYPVQEEYYLRNPHSANPIQLND 146
           +  N++RKSV+GLNFDYL LN++G  LY ++N  LY+   V+ EY+ R P   NP+Q+ND
Sbjct: 145 IYSNYKRKSVVGLNFDYLSLNLVGFILYALFNCGLYWIPVVELEYFRRYPKGLNPVQVND 204

Query: 147 VVFSAHNSLVTLYTVYQCYKYERGNQRLSKGAKLLYTVYAVWVFLSGFLALVHKIHWLDF 206
           + F+ H +  T+ T+ QC+ YE GNQR+S  A++++ ++ V++ +S  LA+V  I WLDF
Sbjct: 205 IFFALHATFATVITIIQCFIYETGNQRVSTTARIIHGIFVVFILISMILAIVTTIKWLDF 264

Query: 207 INQCALIKLTITLIKYAPQAYMNFKRKSTVGWSIGNVLLDFAGGLFSLLQMLILAYNFGK 266
           +  C+ +KL+ITLIKY PQA+ N+KRKSTVGWSIGN+ LDF GG+ S+LQM++ AYN+  
Sbjct: 265 LYYCSYVKLSITLIKYVPQAFYNYKRKSTVGWSIGNIFLDFTGGMLSMLQMILNAYNYDD 324

Query: 267 CKTL 270
            +++
Sbjct: 325 WESI 328

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345483519|ref|XP_003424836.1| PREDICTED: cystinosin homolog isoform 4 [Nasonia vitripennis]

 Score =  237 bits (605), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 111/262 (42%), Positives = 172/262 (65%), Gaps = 1/262 (0%)

Query: 30  GYNPGNAIVLIQLQPYEQLE-KDVVVHVDVEKGHHWTTLSTIIGWIYFVSWGASAHCQVL 88
           G NPGNA++   +   +  +  D  + V VE+      +S ++GWIYF++W  S + Q+ 
Sbjct: 87  GLNPGNALISTNVSGADPSDFSDAFLRVTVERSDTLYHVSAVVGWIYFLAWSISFYPQIH 146

Query: 89  VNWQRKSVIGLNFDYLGLNMIGHSLYGVYNFVLYFSYPVQEEYYLRNPHSANPIQLNDVV 148
            N++RKSV+GLNFDYL LN++G  +Y ++N  LY+   +++EY+ R P   NP+Q+ND+ 
Sbjct: 147 SNYKRKSVVGLNFDYLSLNLVGFIMYALFNCGLYWIPEIEQEYFSRYPKGLNPVQVNDIF 206

Query: 149 FSAHNSLVTLYTVYQCYKYERGNQRLSKGAKLLYTVYAVWVFLSGFLALVHKIHWLDFIN 208
           F+ H    TL T+ QC+ YE G QR+S  A++++ +++ +V +S  LA++H I WLDF+ 
Sbjct: 207 FALHAVCATLVTIVQCFIYETGTQRVSTTARIIHGIFSSFVLISVILAILHVIQWLDFLY 266

Query: 209 QCALIKLTITLIKYAPQAYMNFKRKSTVGWSIGNVLLDFAGGLFSLLQMLILAYNFGKCK 268
            C+ +KL ITLIKY PQA+ N+KRKSTVGWSIGN+ LDF GG+ S+LQM++ AYN+   +
Sbjct: 267 YCSYVKLAITLIKYVPQAFYNYKRKSTVGWSIGNIFLDFTGGVLSMLQMILNAYNYDDWE 326

Query: 269 TLDSYWDQIHLSLIKTKFTLIF 290
           ++     +  L      F + F
Sbjct: 327 SIFGDPTKFGLGFFSVAFDIFF 348

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|357620442|gb|EHJ72634.1| hypothetical protein KGM_12961 [Danaus plexippus]

 Score =  237 bits (605), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 118/236 (50%), Positives = 161/236 (68%), Gaps = 1/236 (0%)

Query: 30  GYNPGNAIVLIQLQPYEQLEKDVV-VHVDVEKGHHWTTLSTIIGWIYFVSWGASAHCQVL 88
           G +PG++ V   + P   ++ D V V V V   +    +S I+GWIYF++W  S + Q+ 
Sbjct: 107 GKSPGHSEVTFNVTPGGFVDMDTVFVRVTVMYSNAIYVISYIMGWIYFLAWSVSFYPQIY 166

Query: 89  VNWQRKSVIGLNFDYLGLNMIGHSLYGVYNFVLYFSYPVQEEYYLRNPHSANPIQLNDVV 148
           +N++RKSV+GLNFD+L LN++G ++Y ++N  LYFS  +Q EY+ R+P S NP+QLNDV 
Sbjct: 167 INFKRKSVVGLNFDFLALNIMGFAMYSLFNCGLYFSKDIQSEYFSRHPRSLNPVQLNDVF 226

Query: 149 FSAHNSLVTLYTVYQCYKYERGNQRLSKGAKLLYTVYAVWVFLSGFLALVHKIHWLDFIN 208
           FS H S  TL T+ QC+ YER NQR+S   + +    A    +S  +A   K+ WLDF+N
Sbjct: 227 FSLHASFATLITITQCFLYERENQRVSVTGRCVLGGMAGVALVSASVAGAGKLAWLDFLN 286

Query: 209 QCALIKLTITLIKYAPQAYMNFKRKSTVGWSIGNVLLDFAGGLFSLLQMLILAYNF 264
            C+ IKL ITLIKY PQAYMN+KRKSTVGWSIGN+ LDF GG  S+LQM + AYN+
Sbjct: 287 YCSYIKLCITLIKYVPQAYMNYKRKSTVGWSIGNIFLDFVGGSLSVLQMTLNAYNY 342

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345483517|ref|XP_003424835.1| PREDICTED: cystinosin homolog isoform 3 [Nasonia vitripennis]

 Score =  237 bits (605), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 111/262 (42%), Positives = 172/262 (65%), Gaps = 1/262 (0%)

Query: 30  GYNPGNAIVLIQLQPYEQLE-KDVVVHVDVEKGHHWTTLSTIIGWIYFVSWGASAHCQVL 88
           G NPGNA++   +   +  +  D  + V VE+      +S ++GWIYF++W  S + Q+ 
Sbjct: 87  GLNPGNALISTNVSGADPSDFSDAFLRVTVERSDTLYHVSAVVGWIYFLAWSISFYPQIH 146

Query: 89  VNWQRKSVIGLNFDYLGLNMIGHSLYGVYNFVLYFSYPVQEEYYLRNPHSANPIQLNDVV 148
            N++RKSV+GLNFDYL LN++G  +Y ++N  LY+   +++EY+ R P   NP+Q+ND+ 
Sbjct: 147 SNYKRKSVVGLNFDYLSLNLVGFIMYALFNCGLYWIPEIEQEYFSRYPKGLNPVQVNDIF 206

Query: 149 FSAHNSLVTLYTVYQCYKYERGNQRLSKGAKLLYTVYAVWVFLSGFLALVHKIHWLDFIN 208
           F+ H    TL T+ QC+ YE G QR+S  A++++ +++ +V +S  LA++H I WLDF+ 
Sbjct: 207 FALHAVCATLVTIVQCFIYETGTQRVSTTARIIHGIFSSFVLISVILAILHVIQWLDFLY 266

Query: 209 QCALIKLTITLIKYAPQAYMNFKRKSTVGWSIGNVLLDFAGGLFSLLQMLILAYNFGKCK 268
            C+ +KL ITLIKY PQA+ N+KRKSTVGWSIGN+ LDF GG+ S+LQM++ AYN+   +
Sbjct: 267 YCSYVKLAITLIKYVPQAFYNYKRKSTVGWSIGNIFLDFTGGVLSMLQMILNAYNYDDWE 326

Query: 269 TLDSYWDQIHLSLIKTKFTLIF 290
           ++     +  L      F + F
Sbjct: 327 SIFGDPTKFGLGFFSVAFDIFF 348

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345483513|ref|XP_003424833.1| PREDICTED: cystinosin homolog isoform 1 [Nasonia vitripennis] gi|345483515|ref|XP_003424834.1| PREDICTED: cystinosin homolog isoform 2 [Nasonia vitripennis]

 Score =  237 bits (605), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 111/262 (42%), Positives = 172/262 (65%), Gaps = 1/262 (0%)

Query: 30  GYNPGNAIVLIQLQPYEQLE-KDVVVHVDVEKGHHWTTLSTIIGWIYFVSWGASAHCQVL 88
           G NPGNA++   +   +  +  D  + V VE+      +S ++GWIYF++W  S + Q+ 
Sbjct: 87  GLNPGNALISTNVSGADPSDFSDAFLRVTVERSDTLYHVSAVVGWIYFLAWSISFYPQIH 146

Query: 89  VNWQRKSVIGLNFDYLGLNMIGHSLYGVYNFVLYFSYPVQEEYYLRNPHSANPIQLNDVV 148
            N++RKSV+GLNFDYL LN++G  +Y ++N  LY+   +++EY+ R P   NP+Q+ND+ 
Sbjct: 147 SNYKRKSVVGLNFDYLSLNLVGFIMYALFNCGLYWIPEIEQEYFSRYPKGLNPVQVNDIF 206

Query: 149 FSAHNSLVTLYTVYQCYKYERGNQRLSKGAKLLYTVYAVWVFLSGFLALVHKIHWLDFIN 208
           F+ H    TL T+ QC+ YE G QR+S  A++++ +++ +V +S  LA++H I WLDF+ 
Sbjct: 207 FALHAVCATLVTIVQCFIYETGTQRVSTTARIIHGIFSSFVLISVILAILHVIQWLDFLY 266

Query: 209 QCALIKLTITLIKYAPQAYMNFKRKSTVGWSIGNVLLDFAGGLFSLLQMLILAYNFGKCK 268
            C+ +KL ITLIKY PQA+ N+KRKSTVGWSIGN+ LDF GG+ S+LQM++ AYN+   +
Sbjct: 267 YCSYVKLAITLIKYVPQAFYNYKRKSTVGWSIGNIFLDFTGGVLSMLQMILNAYNYDDWE 326

Query: 269 TLDSYWDQIHLSLIKTKFTLIF 290
           ++     +  L      F + F
Sbjct: 327 SIFGDPTKFGLGFFSVAFDIFF 348

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195450813|ref|XP_002072644.1| GK13579 [Drosophila willistoni] gi|194168729|gb|EDW83630.1| GK13579 [Drosophila willistoni]

 Score =  235 bits (599), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 111/219 (50%), Positives = 152/219 (69%)

Query: 46  EQLEKDVVVHVDVEKGHHWTTLSTIIGWIYFVSWGASAHCQVLVNWQRKSVIGLNFDYLG 105
             + +D+ V + V K       S + GWIYFV+W  S + Q+ +N++RKSV GLNFD+L 
Sbjct: 108 SSITEDLFVRITVAKSEALIYTSIVFGWIYFVAWSVSFYPQIWINYRRKSVEGLNFDFLT 167

Query: 106 LNMIGHSLYGVYNFVLYFSYPVQEEYYLRNPHSANPIQLNDVVFSAHNSLVTLYTVYQCY 165
           LN++G +LY ++N  LYF   +Q+EY  R+P   NP+ LNDVVFS H    T  T+ QC+
Sbjct: 168 LNIVGFTLYSMFNCGLYFVGSLQDEYENRHPRGLNPVMLNDVVFSLHAMFATTITIVQCF 227

Query: 166 KYERGNQRLSKGAKLLYTVYAVWVFLSGFLALVHKIHWLDFINQCALIKLTITLIKYAPQ 225
            YERG QR+SK A  +  ++ ++V +S  LA V  IHWLDF+  C+ +KLTIT+IKY PQ
Sbjct: 228 IYERGQQRVSKTACGILGIFTLFVMISAILAGVSVIHWLDFLYYCSYVKLTITIIKYVPQ 287

Query: 226 AYMNFKRKSTVGWSIGNVLLDFAGGLFSLLQMLILAYNF 264
           A MNF+RKSTVGWSIGN+LLDF GG  S+LQM++ A+N+
Sbjct: 288 ALMNFRRKSTVGWSIGNILLDFTGGTLSMLQMILNAHNY 326

Source: Drosophila willistoni

Species: Drosophila willistoni

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	369
FB|FBgn0039045	397	CG17119 [Drosophila melanogast	0.604	0.561	0.479	1.5e-53
ZFIN|ZDB-GENE-050522-352	384	ctns "cystinosis, nephropathic	0.607	0.583	0.464	9.2e-52
UNIPROTKB|E1BXK0	377	CTNS "Uncharacterized protein"	0.623	0.610	0.448	2.4e-51
UNIPROTKB|E2R8H4	388	CTNS "Uncharacterized protein"	0.609	0.579	0.453	5.8e-50
UNIPROTKB|F1RLI8	373	CTNS "Uncharacterized protein"	0.601	0.595	0.460	5.2e-49
RGD|1308466	367	Ctns "cystinosin, lysosomal cy	0.531	0.534	0.5	1.1e-48
UNIPROTKB|A7MB63	367	CTNS "Cystinosin" [Bos taurus	0.604	0.607	0.440	2.3e-48
UNIPROTKB|O60931	367	CTNS "Cystinosin" [Homo sapien	0.604	0.607	0.449	4.7e-48
MGI|MGI:1932872	367	Ctns "cystinosis, nephropathic	0.525	0.528	0.51	1.2e-47
UNIPROTKB|A8WN56	403	ctns-1 "Cystinosin homolog" [C	0.617	0.565	0.414	2.6e-47

FB|FBgn0039045 CG17119 [Drosophila melanogaster (taxid:7227)]

 Score = 554 (200.1 bits), Expect = 1.5e-53, P = 1.5e-53
 Identities = 107/223 (47%), Positives = 146/223 (65%)

Query:    68 STIIGWIYFVSWGASAHCQVLVNWQRKSVIGLNFDYLGLNMIGHSLYGVYNFVLYFSYPV 127
             S I GW+YFV+W  S + Q+  N++RKSV GLNFD+L LN++G +LY ++N  LYF   +
Sbjct:   132 SIIFGWVYFVAWSVSFYPQIWSNYRRKSVEGLNFDFLALNIVGFTLYSMFNCGLYFIEDL 191

Query:   128 QEEYYLRNPHSANPIQLNDVVFSAHNSLVTLYTVYQCYKYERGNQRLSKGAKLLYTVYAV 187
             Q EY +R P   NP+ LNDVVFS H    T  T+ QC+ Y+R  QR+S  A  +  ++AV
Sbjct:   192 QNEYEVRYPLGVNPVMLNDVVFSLHAMFATCITILQCFFYQRAQQRVSFIAYGILAIFAV 251

Query:   188 WVFLSGFLALVHKIHWLDFINQCALIKLTITLIKYAPQAYMNFKRKSTVGWSIGNVLLDF 247
              V +S  LA    IHWLDF+  C+ +KLTIT+IKY PQA MN++RKST GWSIGN+LLDF
Sbjct:   252 VVVVSAGLAGGSVIHWLDFLYYCSYVKLTITIIKYVPQALMNYRRKSTSGWSIGNILLDF 311

Query:   248 AGGLFSLLQMLILAYNFGKCKTLDSYWDQIHLSLIKTKFTLIF 290
              GG  S+LQM++ A+N+    ++     +  L L    F + F
Sbjct:   312 TGGTLSMLQMILNAHNYDDWVSIFGDPTKFGLGLFSVLFDVFF 354

GO:0015811 "L-cystine transport" evidence=NAS

GO:0005765 "lysosomal membrane" evidence=NAS

GO:0015184 "L-cystine transmembrane transporter activity" evidence=NAS

GO:0015171 "amino acid transmembrane transporter activity" evidence=ISS

GO:0003333 "amino acid transmembrane transport" evidence=ISS

ZFIN|ZDB-GENE-050522-352 ctns "cystinosis, nephropathic" [Danio rerio (taxid:7955)]

 Score = 537 (194.1 bits), Expect = 9.2e-52, P = 9.2e-52
 Identities = 104/224 (46%), Positives = 147/224 (65%)

Query:    67 LSTIIGWIYFVSWGASAHCQVLVNWQRKSVIGLNFDYLGLNMIGHSLYGVYNFVLYFSYP 126
             ++ IIGWIYFV+W  S + Q   NW+R+SV+GLNFD+L LN+ G   Y V+N  L++   
Sbjct:   131 INQIIGWIYFVAWSVSFYPQAYENWKRRSVVGLNFDFLALNLTGFIAYSVFNVGLFWVTY 190

Query:   127 VQEEYYLRNPHSANPIQLNDVVFSAHNSLVTLYTVYQCYKYERGNQRLSKGAKLLYTVYA 186
             +QEE+  ++P+   P+  NDV FS H  L+TL  + QC  YERG Q++SK A  L  +  
Sbjct:   191 IQEEFLKKDPNGVIPVDANDVFFSLHALLLTLVYICQCAIYERGGQKVSKVAIGLLAIGW 250

Query:   187 VWVFLSGFLALVHKIHWLDFINQCALIKLTITLIKYAPQAYMNFKRKSTVGWSIGNVLLD 246
              + F+S F+A+  KI WLD++   + IKL +TL+KY PQA+MN++RKST GWSIGNVLLD
Sbjct:   251 TFAFVSLFVAVAKKISWLDYLYYFSYIKLGVTLVKYIPQAHMNYRRKSTEGWSIGNVLLD 310

Query:   247 FAGGLFSLLQMLILAYNFGKCKTLDSYWDQIHLSLIKTKFTLIF 290
             F GG FSL+QM + AYN  K + +     +  L +    F ++F
Sbjct:   311 FTGGSFSLIQMFLEAYNNDKWRFIFGDPTKFGLGIFSIFFDILF 354

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|E1BXK0 CTNS "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 533 (192.7 bits), Expect = 2.4e-51, P = 2.4e-51
 Identities = 104/232 (44%), Positives = 149/232 (64%)

Query:    70 IIGWIYFVSWGASAHCQVLVNWQRKSVIGLNFDYLGLNMIGHSLYGVYNFVLYFSYPVQE 129
             +IGWIYF++W  S + Q+  NW+RKSV+GL+FD++ LN+ G   Y V+N  L++   ++E
Sbjct:   140 VIGWIYFLAWSISFYPQLFENWRRKSVVGLSFDFIALNLTGFIAYSVFNVGLFWIPLIKE 199

Query:   130 EYYLRNPHSANPIQLNDVVFSAHNSLVTLYTVYQCYKYERGNQRLSKGAKLLYTVYAVWV 189
             E+ L  P+  NP+ +NDV FS H   +TL T+ QC  YER  Q++SK    L  +  ++ 
Sbjct:   200 EFLLHYPNGVNPVAINDVFFSLHAVALTLLTIIQCCIYERAGQKVSKTVVGLLALAWIFT 259

Query:   190 FLSGFLALVHKIHWLDFINQCALIKLTITLIKYAPQAYMNFKRKSTVGWSIGNVLLDFAG 249
             F + FLA   ++ WL F+   + IKL +TLIKY PQAYMNF+RKSTVGWSIGNVLLDF G
Sbjct:   260 FTTLFLAAAEEMTWLQFLFCFSYIKLAVTLIKYFPQAYMNFRRKSTVGWSIGNVLLDFIG 319

Query:   250 GLFSLLQMLILAYNFGKCKTLDSYWDQIHLSLIKTKFTLIFWA--YMNFKRK 299
             G FSLLQM + +YN  + K +     +  L +    F ++F    Y  ++R+
Sbjct:   320 GSFSLLQMFLQSYNNDEWKLIFGDPTKFGLGVFSIIFDIVFMVQHYCLYRRR 371

GO:0005765 "lysosomal membrane" evidence=IEA

GO:0005770 "late endosome" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0006749 "glutathione metabolic process" evidence=IEA

GO:0007420 "brain development" evidence=IEA

GO:0007616 "long-term memory" evidence=IEA

GO:0007625 "grooming behavior" evidence=IEA

GO:0007628 "adult walking behavior" evidence=IEA

GO:0008542 "visual learning" evidence=IEA

GO:0015184 "L-cystine transmembrane transporter activity" evidence=IEA

GO:0046034 "ATP metabolic process" evidence=IEA

GO:0048058 "compound eye corneal lens development" evidence=IEA

UNIPROTKB|E2R8H4 CTNS "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 520 (188.1 bits), Expect = 5.8e-50, P = 5.8e-50
 Identities = 102/225 (45%), Positives = 143/225 (63%)

Query:    67 LSTIIGWIYFVSWGASAHCQVLVNWQRKSVIGLNFDYLGLNMIGHSLYGVYNFVLYFSYP 126
             ++ +IGWIYFVSW  S + QV+ NW+RKSV+GL+FD++ LN+ G   Y V+N  L +   
Sbjct:   126 INQVIGWIYFVSWSISFYPQVITNWRRKSVVGLSFDFVALNLTGFVAYSVFNIGLLWVPS 185

Query:   127 VQEEYYLRNPHSANPIQLNDVVFSAHNSLVTLYTVYQCYKYERGNQRLSKGAKLLYTVYA 186
             ++E+++L+ P+  NP+  NDV FS H   +TL  + QC+ YERG Q +S  A     +  
Sbjct:   186 IKEQFFLKYPNGVNPVDSNDVFFSLHAVALTLVVMVQCFLYERGTQHVSWPAISFLVLSW 245

Query:   187 VWVFLSGFLALVHKIHWLDFINQCALIKLTITLIKYAPQAYMNFKRKSTVGWSIGNVLLD 246
             V+V ++  LA V  I WL F+   + IKL +TLIKY PQAYMNF  KST GWSIGNVLLD
Sbjct:   246 VFVLVTMILAAVRVITWLQFLFCFSYIKLAVTLIKYFPQAYMNFHYKSTEGWSIGNVLLD 305

Query:   247 FAGGLFSLLQMLILAYNFGKCKTLDSYWDQIHLSLIKTKFTLIFW 291
             F GG FSLLQM + +YN  +   +     +  L +    F ++F+
Sbjct:   306 FTGGSFSLLQMFLQSYNNDQWTLIFGDPTKFGLGIFSIFFDIVFF 350

GO:0048058 "compound eye corneal lens development" evidence=IEA

GO:0046034 "ATP metabolic process" evidence=IEA

GO:0015184 "L-cystine transmembrane transporter activity" evidence=IEA

GO:0008542 "visual learning" evidence=IEA

GO:0007628 "adult walking behavior" evidence=IEA

GO:0007625 "grooming behavior" evidence=IEA

GO:0007616 "long-term memory" evidence=IEA

GO:0007420 "brain development" evidence=IEA

GO:0006749 "glutathione metabolic process" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0005770 "late endosome" evidence=IEA

GO:0005765 "lysosomal membrane" evidence=IEA

UNIPROTKB|F1RLI8 CTNS "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 511 (184.9 bits), Expect = 5.2e-49, P = 5.2e-49
 Identities = 105/228 (46%), Positives = 149/228 (65%)

Query:    67 LSTIIGWIYFVSWGASAHCQVLVNWQRKSVIGLNFDYLGLNMIGHSLYGVYNF-VLYFSY 125
             ++ +IGWIYFV+W  S + QV+ NW+RKSV+GL+FD++ LN++G   Y V+N  +L+  Y
Sbjct:   126 INQVIGWIYFVAWSISFYPQVITNWRRKSVVGLSFDFVALNLMGFVAYSVFNIGLLWVPY 185

Query:   126 PVQEEYYLRNPHSANPIQLNDVVFSAHNSLVTLYTVYQCYKYERGNQRLSKGAKLLYTVY 185
              ++E++ L+ P+  NP+  NDV FS H   +TL  + QC  YERGNQR+S  A + + V 
Sbjct:   186 -IKEQFLLKYPNGVNPVVSNDVFFSLHAVALTLVVLVQCCLYERGNQRVSWPA-ISFLVL 243

Query:   186 AVWVF-LSGFL-ALVHKIHWLDFINQCALIKLTITLIKYAPQAYMNFKRKSTVGWSIGNV 243
             + W+F L+  + A V  I WL F+   + IKL +TLIKY PQAYMNF  KST GWSIGNV
Sbjct:   244 S-WLFTLTALIVAAVGSITWLQFLFCFSYIKLAVTLIKYFPQAYMNFHYKSTEGWSIGNV 302

Query:   244 LLDFAGGLFSLLQMLILAYNFGKCKTLDSYWDQIHLSLIKTKFTLIFW 291
             LLDF GG FSLLQM + +YN  +   +     +  L +    F ++F+
Sbjct:   303 LLDFTGGSFSLLQMFLQSYNNDQWTLIFGDPTKFGLGIFSIIFDIVFF 350

GO:0048058 "compound eye corneal lens development" evidence=IEA

GO:0046034 "ATP metabolic process" evidence=IEA

GO:0015184 "L-cystine transmembrane transporter activity" evidence=IEA

GO:0008542 "visual learning" evidence=IEA

GO:0007628 "adult walking behavior" evidence=IEA

GO:0007625 "grooming behavior" evidence=IEA

GO:0007616 "long-term memory" evidence=IEA

GO:0007420 "brain development" evidence=IEA

GO:0006749 "glutathione metabolic process" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0005770 "late endosome" evidence=IEA

GO:0005765 "lysosomal membrane" evidence=IEA

RGD|1308466 Ctns "cystinosin, lysosomal cystine transporter" [Rattus norvegicus (taxid:10116)]

 Score = 508 (183.9 bits), Expect = 1.1e-48, P = 1.1e-48
 Identities = 101/202 (50%), Positives = 138/202 (68%)

Query:    65 TTLSTIIGWIYFVSWGASAHCQVLVNWQRKSVIGLNFDYLGLNMIGHSLYGVYNF-VLYF 123
             + ++ +IGWIYF++W  S + QV+ NW+RKSV+GL+FD+L LN+ G   Y V+N  +L+ 
Sbjct:   124 SVINQVIGWIYFMAWSVSFYPQVIQNWRRKSVVGLSFDFLALNLTGFVAYSVFNIGLLWV 183

Query:   124 SYPVQEEYYLRNPHSANPIQLNDVVFSAHNSLVTLYTVYQCYKYERGNQRLSKGAKLLYT 183
              Y +QEE+ L+ P+  NP+ +ND  FS H   +TL  + QC  YERGNQR+S+ + + + 
Sbjct:   184 PY-IQEEFLLKYPNGVNPVDINDAFFSLHAVALTLIVILQCCLYERGNQRVSRPS-IGFL 241

Query:   184 VYAVWVFL--SGFLALVHKIHWLDFINQCALIKLTITLIKYAPQAYMNFKRKSTVGWSIG 241
             V A W+F+  +  +A V    WL F+   + IKL ITLIKY PQAYMNF  KST GWSIG
Sbjct:   242 VLA-WLFILVTMIVAAVGVTTWLQFLFCFSYIKLIITLIKYFPQAYMNFYYKSTKGWSIG 300

Query:   242 NVLLDFAGGLFSLLQMLILAYN 263
              VLLDF GG FSLLQM + +YN
Sbjct:   301 GVLLDFTGGSFSLLQMFLQSYN 322

GO:0003333 "amino acid transmembrane transport" evidence=ISO

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0005764 "lysosome" evidence=ISO

GO:0005765 "lysosomal membrane" evidence=IEA;ISO

GO:0005770 "late endosome" evidence=IEA;ISO

GO:0005886 "plasma membrane" evidence=IEA;ISO

GO:0006749 "glutathione metabolic process" evidence=IEA;ISO

GO:0007420 "brain development" evidence=IEA;ISO

GO:0007616 "long-term memory" evidence=IEA;ISO

GO:0007625 "grooming behavior" evidence=IEA;ISO

GO:0007628 "adult walking behavior" evidence=IEA;ISO

GO:0008150 "biological_process" evidence=ND

GO:0008542 "visual learning" evidence=IEA;ISO

GO:0015184 "L-cystine transmembrane transporter activity" evidence=IEA;ISO

GO:0015811 "L-cystine transport" evidence=ISO

GO:0046034 "ATP metabolic process" evidence=IEA;ISO

GO:0048058 "compound eye corneal lens development" evidence=IEA;ISO

GO:0050890 "cognition" evidence=ISO

GO:0005769 "early endosome" evidence=ISO

UNIPROTKB|A7MB63 CTNS "Cystinosin" [Bos taurus (taxid:9913)]

 Score = 505 (182.8 bits), Expect = 2.3e-48, P = 2.3e-48
 Identities = 100/227 (44%), Positives = 147/227 (64%)

Query:    67 LSTIIGWIYFVSWGASAHCQVLVNWQRKSVIGLNFDYLGLNMIGHSLYGVYNFVLYFSYP 126
             ++ +IGWIYFV+W  S + QV+ NW+RKSV+GL+FD++ LN++G   Y V+N  L++   
Sbjct:   126 INQVIGWIYFVAWSVSFYPQVITNWRRKSVVGLSFDFVVLNLMGFVAYSVFNIGLFWVPS 185

Query:   127 VQEEYYLRNPHSANPIQLNDVVFSAHNSLVTLYTVYQCYKYERGNQRLSKGAKLLYTVYA 186
             ++E++ L+ P+  NP+  NDV FS H   +TL  + QC  YERG+QR+S  A + + V +
Sbjct:   186 IKEQFLLKYPNGVNPVDSNDVFFSLHAVALTLVVIVQCLLYERGSQRVSWLA-ISFLVLS 244

Query:   187 VWVF--LSGFLALVHKIHWLDFINQCALIKLTITLIKYAPQAYMNFKRKSTVGWSIGNVL 244
              W+F  ++  +A V    WL F+   + IKL +TL+KY PQAYMNF  KST GWSIGNVL
Sbjct:   245 -WLFTLIALIMAAVGATTWLQFLFCFSYIKLAVTLVKYFPQAYMNFHYKSTEGWSIGNVL 303

Query:   245 LDFAGGLFSLLQMLILAYNFGKCKTLDSYWDQIHLSLIKTKFTLIFW 291
             LDF GG FSLLQM + +YN  +   +     +  L +    F ++F+
Sbjct:   304 LDFTGGSFSLLQMFLQSYNNDQWTLIFGDPTKFGLGIFSIIFDVVFF 350

GO:0005765 "lysosomal membrane" evidence=IEA

GO:0048058 "compound eye corneal lens development" evidence=IEA

GO:0046034 "ATP metabolic process" evidence=IEA

GO:0015184 "L-cystine transmembrane transporter activity" evidence=IEA

GO:0008542 "visual learning" evidence=IEA

GO:0007628 "adult walking behavior" evidence=IEA

GO:0007625 "grooming behavior" evidence=IEA

GO:0007616 "long-term memory" evidence=IEA

GO:0007420 "brain development" evidence=IEA

GO:0006749 "glutathione metabolic process" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0005770 "late endosome" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|O60931 CTNS "Cystinosin" [Homo sapiens (taxid:9606)]

 Score = 502 (181.8 bits), Expect = 4.7e-48, P = 4.7e-48
 Identities = 102/227 (44%), Positives = 148/227 (65%)

Query:    67 LSTIIGWIYFVSWGASAHCQVLVNWQRKSVIGLNFDYLGLNMIGHSLYGVYNF-VLYFSY 125
             ++ +IGWIYFV+W  S + QV++NW+RKSVIGL+FD++ LN+ G   Y V+N  +L+  Y
Sbjct:   126 INQVIGWIYFVAWSISFYPQVIMNWRRKSVIGLSFDFVALNLTGFVAYSVFNIGLLWVPY 185

Query:   126 PVQEEYYLRNPHSANPIQLNDVVFSAHNSLVTLYTVYQCYKYERGNQRLSKGAKLLYTVY 185
              ++E++ L+ P+  NP+  NDV FS H  ++TL  + QC  YERG QR+S  A + + V 
Sbjct:   186 -IKEQFLLKYPNGVNPVNSNDVFFSLHAVVLTLIIIVQCCLYERGGQRVSWPA-IGFLVL 243

Query:   186 A-VWVFLSGFLALVHKIHWLDFINQCALIKLTITLIKYAPQAYMNFKRKSTVGWSIGNVL 244
             A ++ F++  +A V    WL F+   + IKL +TL+KY PQAYMNF  KST GWSIGNVL
Sbjct:   244 AWLFAFVTMIVAAVGVTTWLQFLFCFSYIKLAVTLVKYFPQAYMNFYYKSTEGWSIGNVL 303

Query:   245 LDFAGGLFSLLQMLILAYNFGKCKTLDSYWDQIHLSLIKTKFTLIFW 291
             LDF GG FSLLQM + +YN  +   +     +  L +    F ++F+
Sbjct:   304 LDFTGGSFSLLQMFLQSYNNDQWTLIFGDPTKFGLGVFSIVFDVVFF 350

GO:0016021 "integral to membrane" evidence=IEA

GO:0007616 "long-term memory" evidence=IEA

GO:0007625 "grooming behavior" evidence=IEA

GO:0007628 "adult walking behavior" evidence=IEA

GO:0008542 "visual learning" evidence=IEA

GO:0048058 "compound eye corneal lens development" evidence=IEA

GO:0006520 "cellular amino acid metabolic process" evidence=NAS

GO:0015184 "L-cystine transmembrane transporter activity" evidence=IMP;NAS

GO:0015811 "L-cystine transport" evidence=IDA;IMP;NAS

GO:0007420 "brain development" evidence=IMP

GO:0050890 "cognition" evidence=IMP

GO:0005765 "lysosomal membrane" evidence=IDA;NAS

GO:0005764 "lysosome" evidence=IDA

GO:0005770 "late endosome" evidence=IDA

GO:0006749 "glutathione metabolic process" evidence=IMP

GO:0046034 "ATP metabolic process" evidence=IMP

GO:0005769 "early endosome" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

MGI|MGI:1932872 Ctns "cystinosis, nephropathic" [Mus musculus (taxid:10090)]

 Score = 498 (180.4 bits), Expect = 1.2e-47, P = 1.2e-47
 Identities = 102/200 (51%), Positives = 134/200 (67%)

Query:    67 LSTIIGWIYFVSWGASAHCQVLVNWQRKSVIGLNFDYLGLNMIGHSLYGVYNF-VLYFSY 125
             ++ +IGWIYF++W  S + QV+ NW+RKSVIGL+FD+L LN+ G   Y V+N  +L+  Y
Sbjct:   126 INQVIGWIYFMAWSVSFYPQVIQNWRRKSVIGLSFDFLALNLTGFVAYSVFNIGLLWVPY 185

Query:   126 PVQEEYYLRNPHSANPIQLNDVVFSAHNSLVTLYTVYQCYKYERGNQRLSKGAKLLYTVY 185
              +QEE+ L+ P+  NP+  ND  FS H   +TL  + QC  YERGNQR+S    + + V 
Sbjct:   186 -IQEEFLLKYPNGVNPVDSNDAFFSLHAVALTLIVILQCCLYERGNQRVS-WPSIGFLVL 243

Query:   186 AVWVFL--SGFLALVHKIHWLDFINQCALIKLTITLIKYAPQAYMNFKRKSTVGWSIGNV 243
             A W+F+  +  +A V    WL F+   + IKL ITLIKY PQAYMNF  KST GWSIG V
Sbjct:   244 A-WLFVLVTMIVAAVGITTWLQFLFCFSYIKLIITLIKYFPQAYMNFYYKSTKGWSIGGV 302

Query:   244 LLDFAGGLFSLLQMLILAYN 263
             LLDF GG FSLLQM + +YN
Sbjct:   303 LLDFTGGSFSLLQMFLQSYN 322

GO:0003333 "amino acid transmembrane transport" evidence=IMP;IDA

GO:0005764 "lysosome" evidence=ISO;IDA

GO:0005765 "lysosomal membrane" evidence=ISO

GO:0005770 "late endosome" evidence=ISO

GO:0005886 "plasma membrane" evidence=ISO

GO:0006749 "glutathione metabolic process" evidence=ISO

GO:0006810 "transport" evidence=IEA

GO:0007420 "brain development" evidence=ISO

GO:0007616 "long-term memory" evidence=IMP

GO:0007625 "grooming behavior" evidence=IMP

GO:0007628 "adult walking behavior" evidence=IMP

GO:0008542 "visual learning" evidence=IMP

GO:0015184 "L-cystine transmembrane transporter activity" evidence=ISO;IMP;IDA

GO:0015811 "L-cystine transport" evidence=ISO;IMP;IDA

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0046034 "ATP metabolic process" evidence=ISO

GO:0048058 "compound eye corneal lens development" evidence=IMP

GO:0050890 "cognition" evidence=ISO

UNIPROTKB|A8WN56 ctns-1 "Cystinosin homolog" [Caenorhabditis briggsae (taxid:6238)]

 Score = 495 (179.3 bits), Expect = 2.6e-47, P = 2.6e-47
 Identities = 95/229 (41%), Positives = 139/229 (60%)

Query:    63 HWTT-LSTIIGWIYFVSWGASAHCQVLVNWQRKSVIGLNFDYLGLNMIGHSLYGVYNFVL 121
             HW   L  I+GW YF +W  S + Q+ +N++RKSV+GLNFD+L LN++G   Y ++N ++
Sbjct:   122 HWLAILIQIVGWTYFAAWSVSFYPQMYLNFKRKSVVGLNFDFLSLNLVGFGAYAMFNLLM 181

Query:   122 YFSYPVQEEYYLRNPHSANPIQLNDVVFSAHNSLVTLYTVYQCYKYERGNQRLSKGAKLL 181
             Y++  V+  Y + NP S  P+ LNDVVF+ H  L    T+ QC  YER  QR+S    +L
Sbjct:   182 YYNSHVKNIYSMENPRSPPPVLLNDVVFAVHAFLACFVTILQCIFYERDQQRISTKCIIL 241

Query:   182 YTVYAVWVFLSGFLALVHKIHWLDFINQCALIKLTITLIKYAPQAYMNFKRKSTVGWSIG 241
                   + F+S  + +++KI  LDF+   + IK+ +T  KY PQAY N++RKSTVGWSIG
Sbjct:   242 IIGLVSFGFVSVVVTVLNKITILDFVVSLSYIKMAVTCCKYFPQAYFNYQRKSTVGWSIG 301

Query:   242 NVLLDFAGGLFSLLQMLILAYNFGKCKTLDSYWDQIHLSLIKTKFTLIF 290
             N+LLDF GG   +LQM++ A N        +   +  L  +   F +IF
Sbjct:   302 NILLDFTGGSLDILQMVLQAINVNDWSAFYANPVKFGLGFVSIFFDIIF 350

GO:0005764 "lysosome" evidence=ISS

GO:0006909 "phagocytosis" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9VCR7	CTNS_DROME	No assigned EC number	0.4637	0.6693	0.6221	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	369
TIGR00951	220	TIGR00951, 2A43, Lysosomal Cystine Transporter	5e-45
pfam04193	61	pfam04193, PQ-loop, PQ loop repeat	7e-12
TIGR00951	220	TIGR00951, 2A43, Lysosomal Cystine Transporter	5e-11
pfam04193	61	pfam04193, PQ-loop, PQ loop repeat	1e-08
pfam04193	61	pfam04193, PQ-loop, PQ loop repeat	5e-07
smart00679	32	smart00679, CTNS, Repeated motif present between t	4e-06
smart00679	32	smart00679, CTNS, Repeated motif present between t	0.002

>gnl|CDD|130026 TIGR00951, 2A43, Lysosomal Cystine Transporter

 Score =  153 bits (389), Expect = 5e-45
 Identities = 74/197 (37%), Positives = 112/197 (56%), Gaps = 8/197 (4%)

Query: 67  LSTIIGWIYFVSWGASAHCQVLVNWQRKSVIGLNFDYLGLNMIGHSLYGVYNFVLYFSYP 126
           LS I+GW Y  +W  S + Q++ NW+RKS  GL+FD++ LN++G + Y ++NF+  + + 
Sbjct: 3   LSQILGWGYVAAWSISFYPQIIKNWRRKSAEGLSFDFVMLNLVGFTAYVIFNFLQLYCWS 62

Query: 127 VQEEYYLRNPHSANPIQLNDVVFSAHNSLVTLYTVYQCYKYERGNQRLSKGAKLLYTVYA 186
           +  E+ L +P     +  NDV F+ H  L+    ++QC  YERG QR+S    L   V  
Sbjct: 63  ITNEFPLSSPG----VTQNDVFFTLHAILICFIVLHQCGDYERGWQRVSNPWILRILVAL 118

Query: 187 VWVFLSGFLALVHKIHWLDFINQCALIKLTITLIKYAPQAYMNFKRKSTVGWSIGNVLLD 246
           +  F +  +AL+  I  L F+   + IK+ +TL+KY PQA  N+  KST   SI  V LD
Sbjct: 119 LACFATLLVALLSPITPLAFVTMLSYIKVAVTLVKYFPQAATNYHNKSTGQLSIITVFLD 178

Query: 247 FAGGLFSLLQMLILAYN 263
           F G    LLQ +  + N
Sbjct: 179 FTG----LLQRIFQSVN 191

[Transport and binding proteins, Amino acids, peptides and amines]. Length = 220

>gnl|CDD|202926 pfam04193, PQ-loop, PQ loop repeat

 Score = 59.9 bits (146), Expect = 7e-12
 Identities = 19/55 (34%), Positives = 28/55 (50%)

Query: 210 CALIKLTITLIKYAPQAYMNFKRKSTVGWSIGNVLLDFAGGLFSLLQMLILAYNF 264
              I L + L+ Y PQ   N++RKST G SI  +LL   G +  LL  ++  +  
Sbjct: 5   LGYISLVLWLVSYIPQIIKNYRRKSTEGLSILFLLLWLLGDILYLLYNILNGFPP 59

Members of this family are all membrane bound proteins possessing a pair of repeats each spanning two transmembrane helices connected by a loop. The PQ motif found on loop 2 is critical for the localisation of cystinosin to lysosomes. However, the PQ motif appears not to be a general lysosome-targeting motif. It is thought likely to possess a more general function. Most probably this involves a glutamine residue. Length = 61

>gnl|CDD|130026 TIGR00951, 2A43, Lysosomal Cystine Transporter

 Score = 61.4 bits (149), Expect = 5e-11
 Identities = 30/89 (33%), Positives = 40/89 (44%), Gaps = 13/89 (14%)

Query: 279 LSLIKTKFTLIFW---AYMNFKRKSTVGWSIGNVLLDFAGGLFSLLQMLILAYNFDDWNS 335
           LS IK   TL+ +   A  N+  KST   SI  V LDF G    LLQ +  + N      
Sbjct: 142 LSYIKVAVTLVKYFPQAATNYHNKSTGQLSIITVFLDFTG----LLQRIFQSVNET---- 193

Query: 336 LLTDTTKLGLAAFTLMFDVLFLVQHYILY 364
              D  K GL   + +F+ LF  Q +  +
Sbjct: 194 --GDPLKAGLFVVSSLFNGLFAAQVFFYW 220

[Transport and binding proteins, Amino acids, peptides and amines]. Length = 220

>gnl|CDD|202926 pfam04193, PQ-loop, PQ loop repeat

 Score = 50.6 bits (122), Expect = 1e-08
 Identities = 22/61 (36%), Positives = 36/61 (59%)

Query: 67  LSTIIGWIYFVSWGASAHCQVLVNWQRKSVIGLNFDYLGLNMIGHSLYGVYNFVLYFSYP 126
           LS ++G+I  V W  S   Q++ N++RKS  GL+  +L L ++G  LY +YN +  F   
Sbjct: 1   LSNVLGYISLVLWLVSYIPQIIKNYRRKSTEGLSILFLLLWLLGDILYLLYNILNGFPPL 60

Query: 127 V 127
           +
Sbjct: 61  L 61

Members of this family are all membrane bound proteins possessing a pair of repeats each spanning two transmembrane helices connected by a loop. The PQ motif found on loop 2 is critical for the localisation of cystinosin to lysosomes. However, the PQ motif appears not to be a general lysosome-targeting motif. It is thought likely to possess a more general function. Most probably this involves a glutamine residue. Length = 61

>gnl|CDD|202926 pfam04193, PQ-loop, PQ loop repeat

 Score = 46.0 bits (110), Expect = 5e-07
 Identities = 13/40 (32%), Positives = 20/40 (50%)

Query: 293 YMNFKRKSTVGWSIGNVLLDFAGGLFSLLQMLILAYNFDD 332
             N++RKST G SI  +LL   G +  LL  ++  +    
Sbjct: 22  IKNYRRKSTEGLSILFLLLWLLGDILYLLYNILNGFPPLL 61

Members of this family are all membrane bound proteins possessing a pair of repeats each spanning two transmembrane helices connected by a loop. The PQ motif found on loop 2 is critical for the localisation of cystinosin to lysosomes. However, the PQ motif appears not to be a general lysosome-targeting motif. It is thought likely to possess a more general function. Most probably this involves a glutamine residue. Length = 61

>gnl|CDD|128923 smart00679, CTNS, Repeated motif present between transmembrane helices in cystinosin, yeast ERS1p, mannose-P-dolichol utilization defect 1, and other hypothetical proteins

 Score = 42.8 bits (102), Expect = 4e-06
 Identities = 14/32 (43%), Positives = 18/32 (56%)

Query: 220 IKYAPQAYMNFKRKSTVGWSIGNVLLDFAGGL 251
           +   PQ   N++RKST G SI  VLL   G +
Sbjct: 1   VSLLPQIIKNYRRKSTEGLSILFVLLWLLGDI 32

Function unknown, but likely to be associated with the glycosylation machinery. Length = 32

>gnl|CDD|128923 smart00679, CTNS, Repeated motif present between transmembrane helices in cystinosin, yeast ERS1p, mannose-P-dolichol utilization defect 1, and other hypothetical proteins

 Score = 35.1 bits (82), Expect = 0.002
 Identities = 12/26 (46%), Positives = 15/26 (57%)

Query: 292 AYMNFKRKSTVGWSIGNVLLDFAGGL 317
              N++RKST G SI  VLL   G +
Sbjct: 7   IIKNYRRKSTEGLSILFVLLWLLGDI 32

Function unknown, but likely to be associated with the glycosylation machinery. Length = 32

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	369
KOG3145|consensus	372		100.0
TIGR00951	220	2A43 Lysosomal Cystine Transporter.	100.0
KOG2913|consensus	260		99.95
KOG3145|consensus	372		99.69
TIGR00951	220	2A43 Lysosomal Cystine Transporter.	99.59
PF04193	61	PQ-loop: PQ loop repeat	99.28
PF04193	61	PQ-loop: PQ loop repeat	98.87
KOG2913|consensus	260		98.78
smart00679	32	CTNS Repeated motif present between transmembrane	98.72
KOG3211|consensus	230		98.54
smart00679	32	CTNS Repeated motif present between transmembrane	98.37
PHA02246	192	hypothetical protein	97.07
COG4095	89	Uncharacterized conserved protein [Function unknow	96.16
PHA02246	192	hypothetical protein	95.06
PF03083	87	MtN3_slv: Sugar efflux transporter for intercellul	94.99
KOG3211|consensus	230		94.17
KOG1623|consensus	243		93.3
PF03083	87	MtN3_slv: Sugar efflux transporter for intercellul	92.91
COG4095	89	Uncharacterized conserved protein [Function unknow	87.26
PF00810	147	ER_lumen_recept: ER lumen protein retaining recept	81.24

>KOG3145|consensus

Probab=100.00  E-value=2.1e-79  Score=582.07  Aligned_cols=276  Identities=43%  Similarity=0.789  Sum_probs=262.4

Q ss_pred             ceEEeecCCceeEEEeeeccccccccceEEEEEEeecchhHHHHHHHHHHHHHHHHhhhHHHHHHHHhhcccccccchhh
Q psy10689         25 NQTLNGYNPGNAIVLIQLQPYEQLEKDVVVHVDVEKGHHWTTLSTIIGWIYFVSWGASAHCQVLVNWQRKSVIGLNFDYL  104 (369)
Q Consensus        25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~is~vlGwiy~~~WsvSfyPQi~~NyrrKSv~GLS~DFl  104 (369)
                      .+.++|.+.|+..+..+.+.+  +.+|+|+|++|.+|.++.++++++||+||++||+|||||++.||||||++|||+||+
T Consensus        83 S~~vtg~~~g~l~v~~dg~~~--~~~d~f~R~~v~~S~~l~il~~IvGwvYf~aWSISfYPqii~N~RrKSv~gLnfDFv  160 (372)
T KOG3145|consen   83 SQLVTGAILGALNVTTDGSIT--DLEDAFARMTVIRSIALVILDQIVGWVYFVAWSISFYPQIILNWRRKSVVGLNFDFV  160 (372)
T ss_pred             cEEEeehcccceEEEecCCcc--ccccceeEEEEeehhhHHHHHhhhheeEEEEEeeeechHHHhhhhhcceecccccee
Confidence            355789999999998765554  568999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHhhhhHHHHHHhhhhccccccchhhhcCCCCCCCcchhHHHHHHHHHHHHhhhheeeeeeccCCccccch-hhHHHH
Q psy10689        105 GLNMIGHSLYGVYNFVLYFSYPVQEEYYLRNPHSANPIQLNDVVFSAHNSLVTLYTVYQCYKYERGNQRLSKG-AKLLYT  183 (369)
Q Consensus       105 ~LNllG~~~y~i~n~~~~~~~~i~~qY~~r~p~~~~pV~~ndv~F~lHa~~l~~i~l~Q~~~Y~r~~qr~S~~-~~~i~~  183 (369)
                      +||++||.+|++||++++|.|.+|+||..++|.+.|||..||++||+||++++.+++.||+.|||++||+|+. +.+++.
T Consensus       161 ~LNl~Gfs~y~ifn~~ly~~~~iq~~y~~~~p~g~~pv~~nDv~fslHa~lmt~Iti~Qc~~yeR~~q~vs~~ialgil~  240 (372)
T KOG3145|consen  161 MLNLTGFSAYSIFNFLLYYCPKIQNQYDTSYPLGVPPVTLNDVVFSLHAVLMTVITILQCFFYERGWQRVSKGIALGILA  240 (372)
T ss_pred             eehhhhhHHHHHHHHHHHhcHHhccceeccCCCCCCccchhhhhhhHHHHHHHHHHHHHHHhhhhcccccchhHHHHHHH
Confidence            9999999999999999999999999999999999999999999999999999999999999999999999994 778888


Q ss_pred             HHHHHHHHhhhhhcccchhhhHHHHHHHHHHHHHHhhhhhhhhhhhcccccccccchhHHHHHHhhhHHHHHHHHHHHHh
Q psy10689        184 VYAVWVFLSGFLALVHKIHWLDFINQCALIKLTITLIKYAPQAYMNFKRKSTVGWSIGNVLLDFAGGLFSLLQMLILAYN  263 (369)
Q Consensus       184 ~~~~~~~i~~~~~~~~~~~wLd~l~~l~~ikl~~~~ikyiPQi~~N~rrKSt~G~Si~~~lld~~G~ifsilsl~~~~~~  263 (369)
                      ++++++.+.+.++....+.||++++.++|+|+.++++||+||+++||+||||+||||.+++||++|              
T Consensus       241 i~~~f~~~~~~va~~~~~~wL~f~~~~syiKl~mTliKYiPQa~mN~tRKSt~gwsIgnIlLDfTG--------------  306 (372)
T KOG3145|consen  241 IFWLFAVVFMYVAYWYVIRWLAFLNNLSYIKLAMTLIKYIPQAYMNFTRKSTVGWSIGNILLDFTG--------------  306 (372)
T ss_pred             HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhhHHhhcceeccccccccccEEEEecc--------------
Confidence            899999999999988889999999999999999999999999999999999999998888888888              


Q ss_pred             cCcccccccccceeeeehhhhhhhhHHHHHHHhhcCcccccchhhHHHHHhhhHHHHHHHHHHhhcCCCccccccchhhh
Q psy10689        264 FGKCKTLDSYWDQIHLSLIKTKFTLIFWAYMNFKRKSTVGWSIGNVLLDFAGGLFSLLQMLILAYNFDDWNSLLTDTTKL  343 (369)
Q Consensus       264 ~~q~~~y~~~w~~i~~s~i~~~~~~ipq~~~n~krKSt~G~Si~~~~Ld~~Gg~~s~lq~~~~~~~~~~~~~i~~n~~kl  343 (369)
                                                                          |.+|+|||++|+.|.+||+.+.|||+|+
T Consensus       307 ----------------------------------------------------G~~slLQMilQ~~N~~sw~~f~gnp~Kf  334 (372)
T KOG3145|consen  307 ----------------------------------------------------GTASLLQMILQSSNDNSWDTFYGNPGKF  334 (372)
T ss_pred             ----------------------------------------------------cHHHHHHHHHHHhccccHHHHhcCchhh
Confidence                                                                9999999999999999999999999999


Q ss_pred             hhhhHHHhHHHHHhhhheeeecCCC
Q psy10689        344 GLAAFTLMFDVLFLVQHYILYTDHD  368 (369)
Q Consensus       344 ~l~l~si~fD~if~~Qhy~lY~~~~  368 (369)
                      |||++|++||++||.|||++||+++
T Consensus       335 GLg~vSi~FdiiFm~QhyVly~~~~  359 (372)
T KOG3145|consen  335 GLGLVSIFFDIIFMMQHYVLYPRGH  359 (372)
T ss_pred             hhhhHHHHHHHHHHhhheeEecccc
Confidence            9999999999999999999999653

>TIGR00951 2A43 Lysosomal Cystine Transporter

Probab=100.00  E-value=2e-47  Score=357.88  Aligned_cols=219  Identities=38%  Similarity=0.621  Sum_probs=191.1

Q ss_pred             HHHHHHHHHHHHHHHhhhHHHHHHHHhhcccccccchhhhHHHhhhhHHHHHHhhhhccccccchhhhcCCCCCCCcchh
Q psy10689         66 TLSTIIGWIYFVSWGASAHCQVLVNWQRKSVIGLNFDYLGLNMIGHSLYGVYNFVLYFSYPVQEEYYLRNPHSANPIQLN  145 (369)
Q Consensus        66 ~is~vlGwiy~~~WsvSfyPQi~~NyrrKSv~GLS~DFl~LNllG~~~y~i~n~~~~~~~~i~~qY~~r~p~~~~pV~~n  145 (369)
                      .+|.++||++++||+++++||+++||||||++|+|+||+.+|++|+++|++||+..+++|.+++||..++|    .|+.|
T Consensus         2 ~iS~~lG~~~~~~~~~~~~PQi~~n~k~ks~~GlS~~~~~l~~~g~~~~~~yn~~~~~~~~~~~~~~~~~~----~v~~e   77 (220)
T TIGR00951         2 LLSQILGWGYVAAWSISFYPQIIKNWRRKSAEGLSFDFVMLNLVGFTAYVIFNFLQLYCWSITNEFPLSSP----GVTQN   77 (220)
T ss_pred             chHHHHHHHHHHHHHHHHhhHHHHHHhccccCCcCHHHHHHHHHHHHHHHHHHHHHhcchhhhhccccccC----CCcHH
Confidence            47999999999999999999999999999999999999999999999999999999999999998877653    49999


Q ss_pred             HHHHHHHHHHHHhhhheeeeeeccCCccccchhhHHHHHHHHHHHHhhhhhcccchhhhHHHHHHHHHHHHHHhhhhhhh
Q psy10689        146 DVVFSAHNSLVTLYTVYQCYKYERGNQRLSKGAKLLYTVYAVWVFLSGFLALVHKIHWLDFINQCALIKLTITLIKYAPQ  225 (369)
Q Consensus       146 dv~F~lHa~~l~~i~l~Q~~~Y~r~~qr~S~~~~~i~~~~~~~~~i~~~~~~~~~~~wLd~l~~l~~ikl~~~~ikyiPQ  225 (369)
                      |+++++|+++++++++.||.+|++++||+|+++.+...................+..|+|+++.++++|+.++++||+||
T Consensus        78 dl~~ai~~~il~~l~~~q~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~l~~iki~is~ikyiPQ  157 (220)
T TIGR00951        78 DVFFTLHAILICFIVLHQCGDYERGWQRVSNPWILRILVALLACFATLLVALLSPITPLAFVTMLSYIKVAVTLVKYFPQ  157 (220)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhccccccccchhHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHhHH
Confidence            99999999999999999999999999999999875544333322222222223456899999999999999999999999


Q ss_pred             hhhhcccccccccchhHHHHHHhhhHHHHHHHHHHHHhcCcccccccccceeeeehhhhhhhhHHHHHHHhhcCcccccc
Q psy10689        226 AYMNFKRKSTVGWSIGNVLLDFAGGLFSLLQMLILAYNFGKCKTLDSYWDQIHLSLIKTKFTLIFWAYMNFKRKSTVGWS  305 (369)
Q Consensus       226 i~~N~rrKSt~G~Si~~~lld~~G~ifsilsl~~~~~~~~q~~~y~~~w~~i~~s~i~~~~~~ipq~~~n~krKSt~G~S  305 (369)
                      +++|||||||+|||+..+++|++|                                                        
T Consensus       158 i~~Ny~~ksT~glSi~~i~Ld~~G--------------------------------------------------------  181 (220)
T TIGR00951       158 AATNYHNKSTGQLSIITVFLDFTG--------------------------------------------------------  181 (220)
T ss_pred             HHHHHhcCCCCcCCHHHHHHHHHH--------------------------------------------------------
Confidence            999999999999999999998888                                                        


Q ss_pred             hhhHHHHHhhhHHHHHHHHHHhhcCCCccccccchhhhhhhhHHHhHHHHHhhhheeeec
Q psy10689        306 IGNVLLDFAGGLFSLLQMLILAYNFDDWNSLLTDTTKLGLAAFTLMFDVLFLVQHYILYT  365 (369)
Q Consensus       306 i~~~~Ld~~Gg~~s~lq~~~~~~~~~~~~~i~~n~~kl~l~l~si~fD~if~~Qhy~lY~  365 (369)
                                    .+|+++++.+++      ||++|++++.+|++||++++.|||+ |+
T Consensus       182 --------------~lqri~ts~~~~------gd~~~l~~~~~s~~~n~i~~~Q~~~-y~  220 (220)
T TIGR00951       182 --------------LLQRIFQSVNET------GDPLKAGLFVVSSLFNGLFAAQVFF-YW  220 (220)
T ss_pred             --------------HHHHHHHHHHHc------CCHHHHHHHHHHHHHHHHHHHHHhh-cC
Confidence                          356666665433      9999999999999999999999998 53

>KOG2913|consensus

Probab=99.95  E-value=2.7e-27  Score=226.47  Aligned_cols=243  Identities=21%  Similarity=0.218  Sum_probs=167.2

Q ss_pred             chhHHHHHHHHHHHHHHHHhhhHHHHHHHHhhcccccccchhhhHHHhhhhHHHHHHhhhhccccccchhhhcCCCCCCC
Q psy10689         62 HHWTTLSTIIGWIYFVSWGASAHCQVLVNWQRKSVIGLNFDYLGLNMIGHSLYGVYNFVLYFSYPVQEEYYLRNPHSANP  141 (369)
Q Consensus        62 ~~~~~is~vlGwiy~~~WsvSfyPQi~~NyrrKSv~GLS~DFl~LNllG~~~y~i~n~~~~~~~~i~~qY~~r~p~~~~p  141 (369)
                      ..++.+|.++|.++++||++++.||+++|||+||++|+|.+|+..|++|+++..++.+.               +.+.+.
T Consensus         3 ~~~~~~s~~~g~ls~~~w~v~~iPqi~~n~r~Ks~~glS~lfl~~Wligdi~nl~g~~l---------------~~~~~~   67 (260)
T KOG2913|consen    3 MINDTLSTILGILSTVCWCVQLIPQIIENYRRKSTEGLSPLFLLTWLIGDIFNLVGFFL---------------QPLGST   67 (260)
T ss_pred             chHHHHHHHHHHHHHHhhhhhhhhHHHHhhhccccCCCCHHHHHHHHHccHHHHHHHHh---------------cccchh
Confidence            45788999999999999999999999999999999999999999999999998886654               123335


Q ss_pred             cchhHHHHHHHHHHHHhhhheeeeeeccCCc-cccch---hhHHHHHHHHHHHHhhhhhcccchhhhHHHHHHHHHHHHH
Q psy10689        142 IQLNDVVFSAHNSLVTLYTVYQCYKYERGNQ-RLSKG---AKLLYTVYAVWVFLSGFLALVHKIHWLDFINQCALIKLTI  217 (369)
Q Consensus       142 V~~ndv~F~lHa~~l~~i~l~Q~~~Y~r~~q-r~S~~---~~~i~~~~~~~~~i~~~~~~~~~~~wLd~l~~l~~ikl~~  217 (369)
                      .....+.|.    +.|++++.||.||..... +.-..   ........-+....+..........|-+..  .+....+.
T Consensus        68 ~~~~~~yy~----~~d~~l~~q~~yy~~~~~~~pll~~~s~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~~  141 (260)
T KOG2913|consen   68 LKVQAVYYT----LADSVLFVQCLYYGNIYPREPLLPVPSFRSLLGGLEALLILSIKLFSPRFVKWPVVA--LGFLAIVF  141 (260)
T ss_pred             HHHHHHHHH----HHHHHHHHHHHhcchhcccCccccccchhhhhcchHHHHHHHhhccCcchhhccchh--hhhHHHHH
Confidence            666788884    589999999999985433 22111   111111111111111111111111221111  11122222


Q ss_pred             HhhhhhhhhhhhcccccccccchhHHHHHHhhhHHHHHHHHHHHHhcCcccccccccceeeeehhhhhhhhHHHHHHHhh
Q psy10689        218 TLIKYAPQAYMNFKRKSTVGWSIGNVLLDFAGGLFSLLQMLILAYNFGKCKTLDSYWDQIHLSLIKTKFTLIFWAYMNFK  297 (369)
Q Consensus       218 ~~ikyiPQi~~N~rrKSt~G~Si~~~lld~~G~ifsilsl~~~~~~~~q~~~y~~~w~~i~~s~i~~~~~~ipq~~~n~k  297 (369)
                      .....  +....-+.....|     .-.|..|.++|.+++++                        +.+.+|||+.+|+|
T Consensus       142 ~~~~~--~~~~~~~~~~~~~-----~~~~~lg~ilG~l~a~l------------------------y~~~rIPQI~~n~~  190 (260)
T KOG2913|consen  142 LICGA--AYESLLRAVRVNG-----LEIDSLGAILGSLSALL------------------------YLGARIPQIILNHL  190 (260)
T ss_pred             HHHHH--Hhhccccccccch-----hhhcchHHHHHHHHHHH------------------------Hcccccchhhhhhc
Confidence            22211  1111112222222     66677888877666555                        57889999999999


Q ss_pred             cCcccccchhhHHHHHhhhHHHHHHHHHHhhcCCCccccccchhhhhhhhHHHhHHHHHhhhheeeecCCC
Q psy10689        298 RKSTVGWSIGNVLLDFAGGLFSLLQMLILAYNFDDWNSLLTDTTKLGLAAFTLMFDVLFLVQHYILYTDHD  368 (369)
Q Consensus       298 rKSt~G~Si~~~~Ld~~Gg~~s~lq~~~~~~~~~~~~~i~~n~~kl~l~l~si~fD~if~~Qhy~lY~~~~  368 (369)
                      ||||+|.|..++++..+|+..+..|           +++..|.||+.++.+|+.+|+.++.|.++ ||+++
T Consensus       191 ~~s~eGls~~~F~~~~~~n~~y~~s-----------~~~~~n~~w~~~~~~~~~~D~~~~~q~~~-~~~~~  249 (260)
T KOG2913|consen  191 RKSTEGLSLLAFAFNSLGNTTYILS-----------SYLVTNLPWLVDSKGTIYLDIFIFLQFFN-YRASK  249 (260)
T ss_pred             cCccchhHHHHHHHHHccccccccc-----------cccccCCcccccCCcchhHHHHHHHHHHH-hhccc
Confidence            9999999999999999999999866           78889999999999999999999999665 66543

>KOG3145|consensus

Probab=99.69  E-value=8.2e-19  Score=168.32  Aligned_cols=115  Identities=39%  Similarity=0.591  Sum_probs=98.1

Q ss_pred             HHHHHHHHHHhhhhhhhhhhhcccccccccchhHHHHHHhhhH------------------------------------H
Q psy10689        209 QCALIKLTITLIKYAPQAYMNFKRKSTVGWSIGNVLLDFAGGL------------------------------------F  252 (369)
Q Consensus       209 ~l~~ikl~~~~ikyiPQi~~N~rrKSt~G~Si~~~lld~~G~i------------------------------------f  252 (369)
                      .+|++-.+.|.+++.||+++||||||++|+++.|+.|+++|-+                                    |
T Consensus       126 IvGwvYf~aWSISfYPqii~N~RrKSv~gLnfDFv~LNl~Gfs~y~ifn~~ly~~~~iq~~y~~~~p~g~~pv~~nDv~f  205 (372)
T KOG3145|consen  126 IVGWVYFVAWSISFYPQIILNWRRKSVVGLNFDFVMLNLTGFSAYSIFNFLLYYCPKIQNQYDTSYPLGVPPVTLNDVVF  205 (372)
T ss_pred             hhheeEEEEEeeeechHHHhhhhhcceeccccceeeehhhhhHHHHHHHHHHHhcHHhccceeccCCCCCCccchhhhhh
Confidence            3566666778899999999999999999999999999999977                                    4


Q ss_pred             HHHHHHHHHHhcCccccccccccee-----------------------------------eeehhhhhhhhHH---HHHH
Q psy10689        253 SLLQMLILAYNFGKCKTLDSYWDQI-----------------------------------HLSLIKTKFTLIF---WAYM  294 (369)
Q Consensus       253 silsl~~~~~~~~q~~~y~~~w~~i-----------------------------------~~s~i~~~~~~ip---q~~~  294 (369)
                      ++.+++.+.++..||..|+++|...                                   .+++||+..+.+|   |+++
T Consensus       206 slHa~lmt~Iti~Qc~~yeR~~q~vs~~ialgil~i~~~f~~~~~~va~~~~~~wL~f~~~~syiKl~mTliKYiPQa~m  285 (372)
T KOG3145|consen  206 SLHAVLMTVITILQCFFYERGWQRVSKGIALGILAIFWLFAVVFMYVAYWYVIRWLAFLNNLSYIKLAMTLIKYIPQAYM  285 (372)
T ss_pred             hHHHHHHHHHHHHHHHhhhhcccccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhhHHhh
Confidence            6667778889999999999987662                                   2789998888655   9999


Q ss_pred             HhhcCcccccchhhHHHHHhhhHHHHHHHHHH
Q psy10689        295 NFKRKSTVGWSIGNVLLDFAGGLFSLLQMLIL  326 (369)
Q Consensus       295 n~krKSt~G~Si~~~~Ld~~Gg~~s~lq~~~~  326 (369)
                      ||.||||+||||++++||   -....++++-.
T Consensus       286 N~tRKSt~gwsIgnIlLD---fTGG~~slLQM  314 (372)
T KOG3145|consen  286 NFTRKSTVGWSIGNILLD---FTGGTASLLQM  314 (372)
T ss_pred             cceeccccccccccEEEE---ecccHHHHHHH
Confidence            999999999999999999   66667776643

>TIGR00951 2A43 Lysosomal Cystine Transporter

Probab=99.59  E-value=2.5e-15  Score=141.20  Aligned_cols=105  Identities=29%  Similarity=0.351  Sum_probs=83.2

Q ss_pred             HHHHHHHHHHHhhhhhhhhhhhcccccccccchhHHHHHHhhhHHHHH--------------------------------
Q psy10689        208 NQCALIKLTITLIKYAPQAYMNFKRKSTVGWSIGNVLLDFAGGLFSLL--------------------------------  255 (369)
Q Consensus       208 ~~l~~ikl~~~~ikyiPQi~~N~rrKSt~G~Si~~~lld~~G~ifsil--------------------------------  255 (369)
                      ..+|++..+++.+.++||+++||||||++|+|+.++.++.+|..+...                                
T Consensus         5 ~~lG~~~~~~~~~~~~PQi~~n~k~ks~~GlS~~~~~l~~~g~~~~~~yn~~~~~~~~~~~~~~~~~~~v~~edl~~ai~   84 (220)
T TIGR00951         5 QILGWGYVAAWSISFYPQIIKNWRRKSAEGLSFDFVMLNLVGFTAYVIFNFLQLYCWSITNEFPLSSPGVTQNDVFFTLH   84 (220)
T ss_pred             HHHHHHHHHHHHHHHhhHHHHHHhccccCCcCHHHHHHHHHHHHHHHHHHHHHhcchhhhhccccccCCCcHHHHHHHHH
Confidence            357888899999999999999999999999999999999999875221                                


Q ss_pred             HHHHHHHhcCccccccccccee----------------------------------eeehhhhhh---hhHHHHHHHhhc
Q psy10689        256 QMLILAYNFGKCKTLDSYWDQI----------------------------------HLSLIKTKF---TLIFWAYMNFKR  298 (369)
Q Consensus       256 sl~~~~~~~~q~~~y~~~w~~i----------------------------------~~s~i~~~~---~~ipq~~~n~kr  298 (369)
                      .++.+.....||..|++.|...                                  .++++|...   ..+||+++||||
T Consensus        85 ~~il~~l~~~q~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~l~~iki~is~ikyiPQi~~Ny~~  164 (220)
T TIGR00951        85 AILICFIVLHQCGDYERGWQRVSNPWILRILVALLACFATLLVALLSPITPLAFVTMLSYIKVAVTLVKYFPQAATNYHN  164 (220)
T ss_pred             HHHHHHHHHHHHhhccccccccchhHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHhHHHHHHHhc
Confidence            1223345567777777653321                                  256666554   588899999999


Q ss_pred             CcccccchhhHHHH
Q psy10689        299 KSTVGWSIGNVLLD  312 (369)
Q Consensus       299 KSt~G~Si~~~~Ld  312 (369)
                      |||+|||+..++||
T Consensus       165 ksT~glSi~~i~Ld  178 (220)
T TIGR00951       165 KSTGQLSIITVFLD  178 (220)
T ss_pred             CCCCcCCHHHHHHH
Confidence            99999999999999

>PF04193 PQ-loop: PQ loop repeat

Probab=99.28  E-value=5.8e-12  Score=94.83  Aligned_cols=54  Identities=37%  Similarity=0.557  Sum_probs=51.3

Q ss_pred             HHHHHHHHHHHHHHhhhHHHHHHHHhhcccccccchhhhHHHhhhhHHHHHHhh
Q psy10689         67 LSTIIGWIYFVSWGASAHCQVLVNWQRKSVIGLNFDYLGLNMIGHSLYGVYNFV  120 (369)
Q Consensus        67 is~vlGwiy~~~WsvSfyPQi~~NyrrKSv~GLS~DFl~LNllG~~~y~i~n~~  120 (369)
                      +++++|++..++|.++++||+++|||+||++|+|+.++.++.+|.+++.+|.+.
T Consensus         1 i~~~~g~i~~~~~~~~~lPQi~~~~k~ks~~glS~~~~~l~~~g~~~~~~~~~~   54 (61)
T PF04193_consen    1 ISNILGIISIVLWIISFLPQIIKNYKRKSTGGLSLWFLLLWLIGSILWVLYSIL   54 (61)
T ss_pred             CHHHHHHHHHHHHHHHHHhHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHH
Confidence            368899999999999999999999999999999999999999999999998765

>PF04193 PQ-loop: PQ loop repeat

Probab=98.87  E-value=3.6e-09  Score=79.59  Aligned_cols=54  Identities=31%  Similarity=0.455  Sum_probs=49.1

Q ss_pred             HHHHHHHHHHHhhhhhhhhhhhcccccccccchhHHHHHHhhhHHHHHHHHHHH
Q psy10689        208 NQCALIKLTITLIKYAPQAYMNFKRKSTVGWSIGNVLLDFAGGLFSLLQMLILA  261 (369)
Q Consensus       208 ~~l~~ikl~~~~ikyiPQi~~N~rrKSt~G~Si~~~lld~~G~ifsilsl~~~~  261 (369)
                      +.+|++..++++++++||+++||||||++|+|+.+++++..|+++.++..++..
T Consensus         3 ~~~g~i~~~~~~~~~lPQi~~~~k~ks~~glS~~~~~l~~~g~~~~~~~~~~~~   56 (61)
T PF04193_consen    3 NILGIISIVLWIISFLPQIIKNYKRKSTGGLSLWFLLLWLIGSILWVLYSILSN   56 (61)
T ss_pred             HHHHHHHHHHHHHHHHhHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHhc
Confidence            468999999999999999999999999999999999999999998877766643

>KOG2913|consensus

Probab=98.78  E-value=2.8e-08  Score=95.85  Aligned_cols=162  Identities=14%  Similarity=0.036  Sum_probs=113.1

Q ss_pred             hhhHHHHHHHHHHHHHHhhhhhhhhhhhcccccccccchhHHHHHHhhhHHHHHHHHH-----------------HHHhc
Q psy10689        202 HWLDFINQCALIKLTITLIKYAPQAYMNFKRKSTVGWSIGNVLLDFAGGLFSLLQMLI-----------------LAYNF  264 (369)
Q Consensus       202 ~wLd~l~~l~~ikl~~~~ikyiPQi~~N~rrKSt~G~Si~~~lld~~G~ifsilsl~~-----------------~~~~~  264 (369)
                      .|.+.-..++.+..+++++.++||+++||||||++|+|+.+++.|..|+++.+.+.++                 +...+
T Consensus         4 ~~~~~s~~~g~ls~~~w~v~~iPqi~~n~r~Ks~~glS~lfl~~Wligdi~nl~g~~l~~~~~~~~~~~~yy~~~d~~l~   83 (260)
T KOG2913|consen    4 INDTLSTILGILSTVCWCVQLIPQIIENYRRKSTEGLSPLFLLTWLIGDIFNLVGFFLQPLGSTLKVQAVYYTLADSVLF   83 (260)
T ss_pred             hHHHHHHHHHHHHHHhhhhhhhhHHHHhhhccccCCCCHHHHHHHHHccHHHHHHHHhcccchhHHHHHHHHHHHHHHHH
Confidence            4556667789999999999999999999999999999999999999999987663222                 24568


Q ss_pred             Ccccccccccc-ee---eeehhhhhhh---hHHHHHHHhhcCcccccchhhHHHHHhhhHHHHHHHHHHhhcCCCcc-cc
Q psy10689        265 GKCKTLDSYWD-QI---HLSLIKTKFT---LIFWAYMNFKRKSTVGWSIGNVLLDFAGGLFSLLQMLILAYNFDDWN-SL  336 (369)
Q Consensus       265 ~q~~~y~~~w~-~i---~~s~i~~~~~---~ipq~~~n~krKSt~G~Si~~~~Ld~~Gg~~s~lq~~~~~~~~~~~~-~i  336 (369)
                      .||.+|+.-++ .-   ..+......+   +.-+-.+.+.+|.++=.....-..|..+........-+.  ..+--. .-
T Consensus        84 ~q~~yy~~~~~~~pll~~~s~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--~~~~~~~~~  161 (260)
T KOG2913|consen   84 VQCLYYGNIYPREPLLPVPSFRSLLGGLEALLILSIKLFSPRFVKWPVVALGFLAIVFLICGAAYESLL--RAVRVNGLE  161 (260)
T ss_pred             HHHHhcchhcccCccccccchhhhhcchHHHHHHHhhccCcchhhccchhhhhHHHHHHHHHHHhhccc--cccccchhh
Confidence            89999987655 21   2233333333   333566777788777777777777777666554111110  111111 33


Q ss_pred             ccchhhhhhhhHHHhHHHHHhhhheeeec
Q psy10689        337 LTDTTKLGLAAFTLMFDVLFLVQHYILYT  365 (369)
Q Consensus       337 ~~n~~kl~l~l~si~fD~if~~Qhy~lY~  365 (369)
                      ....+++.+++..++++...+-|-..-|+
T Consensus       162 ~~~lg~ilG~l~a~ly~~~rIPQI~~n~~  190 (260)
T KOG2913|consen  162 IDSLGAILGSLSALLYLGARIPQIILNHL  190 (260)
T ss_pred             hcchHHHHHHHHHHHHcccccchhhhhhc
Confidence            34578889899999999999999444333

>smart00679 CTNS Repeated motif present between transmembrane helices in cystinosin, yeast ERS1p, mannose-P-dolichol utilization defect 1, and other hypothetical proteins

Probab=98.72  E-value=5.3e-09  Score=69.07  Aligned_cols=32  Identities=31%  Similarity=0.439  Sum_probs=29.8

Q ss_pred             hhhHHHHHHHHhhcccccccchhhhHHHhhhh
Q psy10689         81 ASAHCQVLVNWQRKSVIGLNFDYLGLNMIGHS  112 (369)
Q Consensus        81 vSfyPQi~~NyrrKSv~GLS~DFl~LNllG~~  112 (369)
                      ++++||+++|||+||++|+|+.|+++++.|++
T Consensus         1 ~~~~PQi~~~~~~ks~~glS~~~~~l~~~G~~   32 (32)
T smart00679        1 VSLLPQIIKNYRRKSTEGLSILFVLLWLLGDI   32 (32)
T ss_pred             CcchhHHHHHHHcCCcCcCCHHHHHHHHhcCC
Confidence            57899999999999999999999999999863

Function unknown, but likely to be associated with the glycosylation machinery.

>KOG3211|consensus

Probab=98.54  E-value=1.7e-06  Score=80.28  Aligned_cols=160  Identities=18%  Similarity=0.172  Sum_probs=95.1

Q ss_pred             chhHHHHHHHHHHHHHHHHhhhHHHHHHHHhhcccccccchhhhHHHhhhhHHHHHHhhhhccccccchhhhcCCCCCCC
Q psy10689         62 HHWTTLSTIIGWIYFVSWGASAHCQVLVNWQRKSVIGLNFDYLGLNMIGHSLYGVYNFVLYFSYPVQEEYYLRNPHSANP  141 (369)
Q Consensus        62 ~~~~~is~vlGwiy~~~WsvSfyPQi~~NyrrKSv~GLS~DFl~LNllG~~~y~i~n~~~~~~~~i~~qY~~r~p~~~~p  141 (369)
                      -....+|..+||.-.+.=..-..|||..=...||++|+|.-=+.|-++|++-...|++-                .+-|+
T Consensus        25 cl~~llsklLg~~~va~sl~vKlPQI~kI~aakSa~GLSv~s~~LElvgytvtl~Y~~~----------------~g~pF   88 (230)
T KOG3211|consen   25 CLKALLSKLLGLSTVAGSLLVKLPQIMKIRAAKSARGLSVVSLLLELVGYTVTLSYSYT----------------SGYPF   88 (230)
T ss_pred             chHHHHHhhhhHHHHHHHHHhhhhHHHHHHhhcccccccHHHHHHHHHHHHheeeehhh----------------cCCCc
Confidence            34567899999999999999999999999999999999999999999998865555432                23344


Q ss_pred             cchhHHHHHHHHHHHHhhhheeeeeeccCCccccchhhHHHHHHHHHHHHhhhhhcccchhhhHHHHHHHHHHHHHHhhh
Q psy10689        142 IQLNDVVFSAHNSLVTLYTVYQCYKYERGNQRLSKGAKLLYTVYAVWVFLSGFLALVHKIHWLDFINQCALIKLTITLIK  221 (369)
Q Consensus       142 V~~ndv~F~lHa~~l~~i~l~Q~~~Y~r~~qr~S~~~~~i~~~~~~~~~i~~~~~~~~~~~wLd~l~~l~~ikl~~~~ik  221 (369)
                      -..-|-.|=   ++.+.+++.+.+.|+  .|.+....  +++-..+.  .............++..   -...+-+..+.
T Consensus        89 ss~gE~~fL---l~Q~vili~~if~f~--~~~~~~v~--~l~~~~~v--~~~~~sk~~p~~~~~L~---~~~~l~i~v~s  156 (230)
T KOG3211|consen   89 SSYGEYPFL---LLQAVILILCIFHFS--GQTVTVVQ--FLGYIALV--VSVLASKALPLWIITLA---QNLCLPIVVVS  156 (230)
T ss_pred             hhHHHHHHH---HHHHHHHHHHHHHhc--cceeehhh--HHHHHHHH--HHHHHHhhhhHHHHHHH---HhcCchhhhHH
Confidence            444455553   244555566666665  23222211  11000000  00001100011111111   11112244567


Q ss_pred             hhhhhhhhcccccccccchhHHHHHHhh
Q psy10689        222 YAPQAYMNFKRKSTVGWSIGNVLLDFAG  249 (369)
Q Consensus       222 yiPQi~~N~rrKSt~G~Si~~~lld~~G  249 (369)
                      ++||+..|||.|+|.-.|....+|.+.|
T Consensus       157 r~~Qi~~n~~~~~tgqls~it~fLsf~g  184 (230)
T KOG3211|consen  157 RLLQIQCNYHNRSTGQLSLITVFLSFGG  184 (230)
T ss_pred             HHHHHHHHhcccccchhHHHHHHHHhhh
Confidence            7788888888887777776666666666

>smart00679 CTNS Repeated motif present between transmembrane helices in cystinosin, yeast ERS1p, mannose-P-dolichol utilization defect 1, and other hypothetical proteins

Probab=98.37  E-value=2e-07  Score=61.48  Aligned_cols=31  Identities=42%  Similarity=0.456  Sum_probs=29.0

Q ss_pred             hhHHHHHHHhhcCcccccchhhHHHHHhhhH
Q psy10689        287 TLIFWAYMNFKRKSTVGWSIGNVLLDFAGGL  317 (369)
Q Consensus       287 ~~ipq~~~n~krKSt~G~Si~~~~Ld~~Gg~  317 (369)
                      +++||+++|+|+||++|+|+.+++++++|++
T Consensus         2 ~~~PQi~~~~~~ks~~glS~~~~~l~~~G~~   32 (32)
T smart00679        2 SLLPQIIKNYRRKSTEGLSILFVLLWLLGDI   32 (32)
T ss_pred             cchhHHHHHHHcCCcCcCCHHHHHHHHhcCC
Confidence            5799999999999999999999999999974

Function unknown, but likely to be associated with the glycosylation machinery.

>PHA02246 hypothetical protein

Probab=97.07  E-value=0.015  Score=52.27  Aligned_cols=148  Identities=20%  Similarity=0.236  Sum_probs=80.8

Q ss_pred             HHHHHHHHHHHHHHHHhhhHHHHHHHHhhcccccccchhhhH--HHhhhhHHHHHHhhhhccccccchhhhcCCCCCCCc
Q psy10689         65 TTLSTIIGWIYFVSWGASAHCQVLVNWQRKSVIGLNFDYLGL--NMIGHSLYGVYNFVLYFSYPVQEEYYLRNPHSANPI  142 (369)
Q Consensus        65 ~~is~vlGwiy~~~WsvSfyPQi~~NyrrKSv~GLS~DFl~L--NllG~~~y~i~n~~~~~~~~i~~qY~~r~p~~~~pV  142 (369)
                      +.++..+...|...=.+.++||...=.|.|+++|.|-.|..+  -.+|...   ||++.-              +..+- 
T Consensus         2 d~~~~~~s~~yailit~gYipgL~slvk~~nv~GvS~~FWYLi~~tvgiSf---yNlL~T--------------~~~~f-   63 (192)
T PHA02246          2 DNLSHYLSILYAILITVGYIPGLVALVKAESVKGVSNYFWYLIVATVGISF---YNLLLT--------------DASVF-   63 (192)
T ss_pred             chHHHHHHHHHHHHHHhhhhhhHHHHhhhcccccHHHHHHHHHHHHHHHHH---HHHHhc--------------CCceE-
Confidence            346777888999999999999999999999999999655443  4455544   565521              11111 


Q ss_pred             chhHHHHHHHHHHHHhhhheeeeeeccCCccccchhhHHHHHHHHHHHHhhhhhcccchhhhHHHHHHHHHHHHHHhhhh
Q psy10689        143 QLNDVVFSAHNSLVTLYTVYQCYKYERGNQRLSKGAKLLYTVYAVWVFLSGFLALVHKIHWLDFINQCALIKLTITLIKY  222 (369)
Q Consensus       143 ~~ndv~F~lHa~~l~~i~l~Q~~~Y~r~~qr~S~~~~~i~~~~~~~~~i~~~~~~~~~~~wLd~l~~l~~ikl~~~~iky  222 (369)
                      |+-.+---+   .+..+. .-...|++++ -.+.+...++.   ++.+.   +  .      |....--.+........|
T Consensus        64 qi~svg~nl---~lgivc-Llv~~~rkkd-~f~~~fiiifS---Lllfl---l--~------~~~evtQtVat~tIiLaY  124 (192)
T PHA02246         64 QIVSVGLNL---TLGIVC-LLVASYRKKD-YFSIPFIIVFS---LLLFL---L--S------DFTALTQTVATITIILAY  124 (192)
T ss_pred             EEeeeehhh---hhhhhh-eeeehhhccc-cccchHHHHHH---HHHHH---H--h------hhHHHHHHHHHHHHHHHH
Confidence            111111100   011111 1112354322 22333221111   11110   0  0      111111223334446789


Q ss_pred             hhhhhhhcccccccccchhHHHHHHhh
Q psy10689        223 APQAYMNFKRKSTVGWSIGNVLLDFAG  249 (369)
Q Consensus       223 iPQi~~N~rrKSt~G~Si~~~lld~~G  249 (369)
                      +||+..=||.|+.||.+.++.+.--.|
T Consensus       125 i~QIIqfyKTK~SEg~n~~l~lii~~G  151 (192)
T PHA02246        125 VTQITTFYKTKSAEGTNRFLFLIIGLG  151 (192)
T ss_pred             HHHHHHHhhhcccCCCChhHHHHHHHH
Confidence            999999999999999999887765555

>COG4095 Uncharacterized conserved protein [Function unknown]

Probab=96.16  E-value=0.03  Score=45.77  Aligned_cols=54  Identities=15%  Similarity=0.115  Sum_probs=48.5

Q ss_pred             HHHHHHHHHHHHHHhhhHHHHHHHHhhcccccccchhhhHHHhhhhHHHHHHhh
Q psy10689         67 LSTIIGWIYFVSWGASAHCQVLVNWQRKSVIGLNFDYLGLNMIGHSLYGVYNFV  120 (369)
Q Consensus        67 is~vlGwiy~~~WsvSfyPQi~~NyrrKSv~GLS~DFl~LNllG~~~y~i~n~~  120 (369)
                      .-.++||+.-..=...|+||.+.-+|.|++.++|+.++..-..|..++.+|...
T Consensus         4 ~~~viG~ia~ilttf~flPQ~iki~ktK~t~~Isl~~fii~~ia~~lwliygIL   57 (89)
T COG4095           4 FIEVIGTIAGILTTFAFLPQLIKIIKTKNTASISLPMFIILNIALFLWLIYGIL   57 (89)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHhccccccccHHHHHHHHHHHHHHHHHHHH
Confidence            345789998888899999999999999999999999999988999999998765

>PHA02246 hypothetical protein

Probab=95.06  E-value=0.12  Score=46.70  Aligned_cols=117  Identities=18%  Similarity=0.125  Sum_probs=80.2

Q ss_pred             HHHHHHHHHHhhhhhhhhhhhcccccccccchhHHHHHHhhhHHHHHHHHHHHH------hcCc-------cc---cccc
Q psy10689        209 QCALIKLTITLIKYAPQAYMNFKRKSTVGWSIGNVLLDFAGGLFSLLQMLILAY------NFGK-------CK---TLDS  272 (369)
Q Consensus       209 ~l~~ikl~~~~ikyiPQi~~N~rrKSt~G~Si~~~lld~~G~ifsilsl~~~~~------~~~q-------~~---~y~~  272 (369)
                      +++..-+.+..++|+||...-++.|+++|.|-+|-.+-..---+|+..++.+-.      ..+|       |.   .|++
T Consensus         7 ~~s~~yailit~gYipgL~slvk~~nv~GvS~~FWYLi~~tvgiSfyNlL~T~~~~fqi~svg~nl~lgivcLlv~~~rk   86 (192)
T PHA02246          7 YLSILYAILITVGYIPGLVALVKAESVKGVSNYFWYLIVATVGISFYNLLLTDASVFQIVSVGLNLTLGIVCLLVASYRK   86 (192)
T ss_pred             HHHHHHHHHHHhhhhhhHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHHhcCCceEEEeeeehhhhhhhhheeeehhhc
Confidence            455566667788999999999999999999988887766665567776554322      2222       21   2322


Q ss_pred             c--cce--e------------------eeehhhhhhhhHHHHHHHhhcCcccccchhhHHHHHhhhHHHHHHHHH
Q psy10689        273 Y--WDQ--I------------------HLSLIKTKFTLIFWAYMNFKRKSTVGWSIGNVLLDFAGGLFSLLQMLI  325 (369)
Q Consensus       273 ~--w~~--i------------------~~s~i~~~~~~ipq~~~n~krKSt~G~Si~~~~Ld~~Gg~~s~lq~~~  325 (369)
                      .  ...  +                  .++.+..+.+-+||+..-||.|+-||-|....++--+|=.+=..+|++
T Consensus        87 kd~f~~~fiiifSLllfll~~~~evtQtVat~tIiLaYi~QIIqfyKTK~SEg~n~~l~lii~~GL~~L~~~m~L  161 (192)
T PHA02246         87 KDYFSIPFIIVFSLLLFLLSDFTALTQTVATITIILAYVTQITTFYKTKSAEGTNRFLFLIIGLGLASLIVSMVL  161 (192)
T ss_pred             cccccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCChhHHHHHHHHHHHHHHHHhh
Confidence            1  111  0                  245555677789999999999999999998877765554444455554

>PF03083 MtN3_slv: Sugar efflux transporter for intercellular exchange; InterPro: IPR004316 This family includes proteins such as Drosophila saliva [], MtN3 involved in root nodule development [] and proteins involved in activation and expression of recombination activation genes (RAGs) []

Probab=94.99  E-value=0.1  Score=41.61  Aligned_cols=50  Identities=14%  Similarity=0.063  Sum_probs=41.3

Q ss_pred             HHHHHHHHHHhhhHHHHHHHHhhcccccccchhhhHHHhhhhHHHHHHhh
Q psy10689         71 IGWIYFVSWGASAHCQVLVNWQRKSVIGLNFDYLGLNMIGHSLYGVYNFV  120 (369)
Q Consensus        71 lGwiy~~~WsvSfyPQi~~NyrrKSv~GLS~DFl~LNllG~~~y~i~n~~  120 (369)
                      +|-+..++=..|-.||+++-+|+||++++|+-..+..+++..++..|...
T Consensus         6 ~~~~~~i~~~~spl~~i~~v~k~ks~~~~~~~~~~~~~~~~~~W~~YG~l   55 (87)
T PF03083_consen    6 LASVSSIIMFLSPLPQIRQVIKTKSTGSVSFPPFLAMFFNCVLWLIYGIL   55 (87)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCCCCCccceehhHHHhhhccHhhhhhhh
Confidence            44555556667788999999999999999999999988888888887654

Although the molecular function of these proteins is unknown, they are almost certainly transmembrane proteins. This signature maps to transmembrane helices which are found in two copies in most members of the family.; GO: 0016021 integral to membrane

>KOG3211|consensus

Probab=94.17  E-value=0.16  Score=47.86  Aligned_cols=147  Identities=22%  Similarity=0.220  Sum_probs=94.7

Q ss_pred             HHHHHHHHhhhhhhhhhhhcccccccccchhHHHHHHhhhHHHHH--------------------HHHH---HHHh-cCc
Q psy10689        211 ALIKLTITLIKYAPQAYMNFKRKSTVGWSIGNVLLDFAGGLFSLL--------------------QMLI---LAYN-FGK  266 (369)
Q Consensus       211 ~~ikl~~~~ikyiPQi~~N~rrKSt~G~Si~~~lld~~G~ifsil--------------------sl~~---~~~~-~~q  266 (369)
                      |+.-..-++.--+|||...-..||.+|+|...+.|...|...++.                    +..+   ...- -+|
T Consensus        35 g~~~va~sl~vKlPQI~kI~aakSa~GLSv~s~~LElvgytvtl~Y~~~~g~pFss~gE~~fLl~Q~vili~~if~f~~~  114 (230)
T KOG3211|consen   35 GLSTVAGSLLVKLPQIMKIRAAKSARGLSVVSLLLELVGYTVTLSYSYTSGYPFSSYGEYPFLLLQAVILILCIFHFSGQ  114 (230)
T ss_pred             hHHHHHHHHHhhhhHHHHHHhhcccccccHHHHHHHHHHHHheeeehhhcCCCchhHHHHHHHHHHHHHHHHHHHHhccc
Confidence            333334444444699999999999999999999999999873221                    1110   0000 011


Q ss_pred             ------ccccc----ccccee-----------eeehhhhhhhhHHHHHHHhhcCcccccchhhHHHHHhhhHHHHHHHHH
Q psy10689        267 ------CKTLD----SYWDQI-----------HLSLIKTKFTLIFWAYMNFKRKSTVGWSIGNVLLDFAGGLFSLLQMLI  325 (369)
Q Consensus       267 ------~~~y~----~~w~~i-----------~~s~i~~~~~~ipq~~~n~krKSt~G~Si~~~~Ld~~Gg~~s~lq~~~  325 (369)
                            ...|-    ..|.-.           ....-....++++|++.|||.|+|--.|....+|.+.|..+-+.--+.
T Consensus       115 ~~~~v~~l~~~~~v~~~~~sk~~p~~~~~L~~~~~l~i~v~sr~~Qi~~n~~~~~tgqls~it~fLsf~g~lARiftsiq  194 (230)
T KOG3211|consen  115 TVTVVQFLGYIALVVSVLASKALPLWIITLAQNLCLPIVVVSRLLQIQCNYHNRSTGQLSLITVFLSFGGCLARIFTSIQ  194 (230)
T ss_pred             eeehhhHHHHHHHHHHHHHHhhhhHHHHHHHHhcCchhhhHHHHHHHHHHhcccccchhHHHHHHHHhhhHHHHHHHHHH
Confidence                  00000    011000           112222457899999999999999999999999999888776533332


Q ss_pred             HhhcCCCccccccchhhhhhhhHHHhHHHHHhhhheeeecCCC
Q psy10689        326 LAYNFDDWNSLLTDTTKLGLAAFTLMFDVLFLVQHYILYTDHD  368 (369)
Q Consensus       326 ~~~~~~~~~~i~~n~~kl~l~l~si~fD~if~~Qhy~lY~~~~  368 (369)
                         ..       +|+.-++.-..+++.+.+++.| ..+||++.
T Consensus       195 ---~t-------~d~~mll~~v~s~~~Ng~i~aq-~l~Y~s~~  226 (230)
T KOG3211|consen  195 ---ET-------GDFLMLLRFVISLALNGLITAQ-VLRYWSTA  226 (230)
T ss_pred             ---hc-------CChhhHHHHHHHHHHhHHHHHH-HHHHHhcC
Confidence               22       3455556667788999999999 55698753

>KOG1623|consensus

Probab=93.30  E-value=0.57  Score=45.18  Aligned_cols=49  Identities=22%  Similarity=0.132  Sum_probs=35.3

Q ss_pred             HHHHHHHHHHHhhhHHHHHHHHhhcccccccchhhhHHHhhhhHHHHHH
Q psy10689         70 IIGWIYFVSWGASAHCQVLVNWQRKSVIGLNFDYLGLNMIGHSLYGVYN  118 (369)
Q Consensus        70 vlGwiy~~~WsvSfyPQi~~NyrrKSv~GLS~DFl~LNllG~~~y~i~n  118 (369)
                      ++|-+..++=..+=.|-.+.=+||||+||.|....+.-+++..++.-|.
T Consensus        11 i~~~~is~~~fl~pv~tf~~I~KkkS~e~~s~~Pfl~~ll~~~lWl~YG   59 (243)
T KOG1623|consen   11 ILGNIISFGVFLSPVPTFRRIRKKKSVEGFSSLPFLMGLLSCSLWLYYG   59 (243)
T ss_pred             HHHHHHhHHHhhcCchhHHHhhcccCcCCCCCcCcHHHHHHHHHHHHhh
Confidence            3333444444455668888889999999999988888888777665543

>PF03083 MtN3_slv: Sugar efflux transporter for intercellular exchange; InterPro: IPR004316 This family includes proteins such as Drosophila saliva [], MtN3 involved in root nodule development [] and proteins involved in activation and expression of recombination activation genes (RAGs) []

Probab=92.91  E-value=0.24  Score=39.54  Aligned_cols=73  Identities=22%  Similarity=0.365  Sum_probs=49.8

Q ss_pred             hhhhHHHHHHHhhcCcccccchhhHHHHHhhhHHHHHHHHHHhhcCCCccccccchhhhhhhhHHHhHHHHHhhhheeee
Q psy10689        285 KFTLIFWAYMNFKRKSTVGWSIGNVLLDFAGGLFSLLQMLILAYNFDDWNSLLTDTTKLGLAAFTLMFDVLFLVQHYILY  364 (369)
Q Consensus       285 ~~~~ipq~~~n~krKSt~G~Si~~~~Ld~~Gg~~s~lq~~~~~~~~~~~~~i~~n~~kl~l~l~si~fD~if~~Qhy~lY  364 (369)
                      ..+-+|++.+..|+||+++.|......-+.++.+-+.    .+...+||-.+..|.       +.+++..+.+.- |..|
T Consensus        15 ~~spl~~i~~v~k~ks~~~~~~~~~~~~~~~~~~W~~----YG~l~~d~~i~~~N~-------~g~~~~~~~~~~-~~~y   82 (87)
T PF03083_consen   15 FLSPLPQIRQVIKTKSTGSVSFPPFLAMFFNCVLWLI----YGILINDWPIIVPNV-------FGLVLSIIYLVV-YYIY   82 (87)
T ss_pred             HHHHHHHHHHHHhCCCCCccceehhHHHhhhccHhhh----hhhhcCCeeEEeeHH-------HHHHHHHHHHhh-eEEe
Confidence            3445789999999999999999999888777766532    222335665555554       445555566666 6668


Q ss_pred             cCCCC
Q psy10689        365 TDHDD  369 (369)
Q Consensus       365 ~~~~~  369 (369)
                      +++++
T Consensus        83 ~~~~~   87 (87)
T PF03083_consen   83 PSKKK   87 (87)
T ss_pred             CCCCC
Confidence            77653

Although the molecular function of these proteins is unknown, they are almost certainly transmembrane proteins. This signature maps to transmembrane helices which are found in two copies in most members of the family.; GO: 0016021 integral to membrane

>COG4095 Uncharacterized conserved protein [Function unknown]

Probab=87.26  E-value=0.91  Score=37.21  Aligned_cols=42  Identities=19%  Similarity=0.142  Sum_probs=37.0

Q ss_pred             HHHHHHHHHHHhhhhhhhhhhhcccccccccchhHHHHHHhh
Q psy10689        208 NQCALIKLTITLIKYAPQAYMNFKRKSTVGWSIGNVLLDFAG  249 (369)
Q Consensus       208 ~~l~~ikl~~~~ikyiPQi~~N~rrKSt~G~Si~~~lld~~G  249 (369)
                      ...|++...++...++||..+-+|.|+|.+.|+.++..-..|
T Consensus         6 ~viG~ia~ilttf~flPQ~iki~ktK~t~~Isl~~fii~~ia   47 (89)
T COG4095           6 EVIGTIAGILTTFAFLPQLIKIIKTKNTASISLPMFIILNIA   47 (89)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhccccccccHHHHHHHHHH
Confidence            346788888899999999999999999999999988887777

>PF00810 ER_lumen_recept: ER lumen protein retaining receptor; InterPro: IPR000133 Proteins resident in the lumen of the endoplasmic reticulum (ER) contain a C-terminal tetrapeptide, commonly known as Lys-Asp-Glu-Leu (KDEL) in mammals and His-Asp-Glu-Leu (HDEL) in yeast (Saccharomyces cerevisiae) that acts as a signal for their retrieval from subsequent compartments of the secretory pathway

Probab=81.24  E-value=16  Score=32.52  Aligned_cols=41  Identities=15%  Similarity=0.126  Sum_probs=34.9

Q ss_pred             HHHHHHHHHHHHHHhhhhhhhhhhhcccccccccchhHHHH
Q psy10689        205 DFINQCALIKLTITLIKYAPQAYMNFKRKSTVGWSIGNVLL  245 (369)
Q Consensus       205 d~l~~l~~ikl~~~~ikyiPQi~~N~rrKSt~G~Si~~~ll  245 (369)
                      .+.+.++..+..+..++.+||..+-.|++.+|.+..+++..
T Consensus        91 ~~~ei~wtfSi~LEsvAIlPQL~m~~k~~~ve~ltshYv~~  131 (147)
T PF00810_consen   91 FFLEILWTFSIYLESVAILPQLFMLQKTGEVENLTSHYVFA  131 (147)
T ss_pred             hHHHHHHHHHHHHHHHHHhHHHHHHHHhcCeeehHHHHHHH
Confidence            45667888899999999999999999999999888776654

The receptor for this signal is a ~26 kDa Golgi membrane protein, initially identified as the ERD2 gene product in S. cerevisiae. The receptor molecule, known variously as the ER lumen protein retaining receptor or the 'KDEL receptor', is believed to cycle between the cis side of the Golgi apparatus and the ER. It has also been characterised in a number of other species, including plants, Plasmodium, Drosophila and mammals. In mammals, 2 highly related forms of the receptor are known. The KDEL receptor is a highly hydrophobic protein of 220 residues; its sequence exhibits 7 hydrophobic regions, all of which have been suggested to traverse the membrane []. More recently, however, it has been suggested that only 6 of these regions are transmembrane (TM), resulting in both N- and C-termini on the cytoplasmic side of the membrane.; GO: 0046923 ER retention sequence binding, 0006621 protein retention in ER lumen, 0016021 integral to membrane

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	369
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-09

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 57.2 bits (137), Expect = 4e-09
 Identities = 64/357 (17%), Positives = 121/357 (33%), Gaps = 88/357 (24%)

Query: 5   KNGRNLSKSGQNTAKRSNHLNQTLNGYNPGNAIVLIQLQPYEQLEKDVVVHVDVEKGHHW 64
            N  + S    N   R + +   L          L++ +PYE     ++V ++V+    W
Sbjct: 211 PNWTSRSDHSSNIKLRIHSIQAELRR--------LLKSKPYE---NCLLVLLNVQNAKAW 259

Query: 65  TTLSTIIGWIYFVSWGASAHCQVLVNWQRKSVIGLNFDYLGLNM-----IGHSLYGVYN- 118
                      F     +  C++L+  + K V     D+L         + H    +   
Sbjct: 260 N---------AF-----NLSCKILLTTRFKQVT----DFLSAATTTHISLDHHSMTLTPD 301

Query: 119 -----FVLYFSYPVQEEYYLRNPHSA---NPIQLNDVVFSAHNSLVTLYTVYQCYKYERG 170
                 + Y     Q+      P      NP +L+ +  S  + L T +  ++    ++ 
Sbjct: 302 EVKSLLLKYLDCRPQDL-----PREVLTTNPRRLSIIAESIRDGLAT-WDNWKHVNCDKL 355

Query: 171 NQRLSKGAKLL--YTVYAVWVFLSGFLALVH------KIHWLDFINQCALIKLTITLIKY 222
              +     +L       ++  LS F    H       + W D I    ++ +   L KY
Sbjct: 356 TTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVN-KLHKY 414

Query: 223 APQAYMNFKRKSTVGWSIGNVLLDFAG---GLFSLLQMLILAYNFGKC--------KTLD 271
           +    +  K+      SI ++ L+        ++L + ++  YN  K           LD
Sbjct: 415 S----LVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLD 470

Query: 272 SYWDQ-I--HLSLIKT--KFTLIFWAYMNFK------RKSTVGW----SIGNVLLDF 313
            Y+   I  HL  I+   + TL    +++F+      R  +  W    SI N L   
Sbjct: 471 QYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQL 527

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00