Psyllid ID: psy1072

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320----
Protein Sequence
MSSSISRYANIIFVVALYWCVSITTIFLNKTLLSELQLDAPIFVTWYQCLVSAIICFVLCQLSQQYPKNFSFPYGNPFDTNNMRNLVPLTSCFILMLSFNNLCLKNVGVAFYYVSRSLTTVFNVILTYILLQEKTSHLAILSCFIIFSGFALGVNQEGVAGSFSTLGTIYGVISSFAQALFSIHTKEVLPYVNDKIWLVSYYNNVYAVALFIPIIFICGEVSELANYPHLFSFYFWILLTIGGVFGLTIGYVTSLQIQVTSPLTHNISGTAKASFHTVLATYWYSEFKPLLWWISNGIILSGSATYALVKKKELDRRKDMEELL
Secondary Structure (PSIPRED)
cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHccEEEEcccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHccHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHcccc
Secondary Structure Prediction (SSPRO)
cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHccccHHHHHHHHHccccHHHccHHHHHHHHHHHHHHHHHHHHHHHcccccHHEEEEEEHEHHHHHEEcccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccccccEEEEEcHHHHHHHHHHHHHHcccHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccc
Coil and Loop (DISEMBL)
MSSSISRYANIIFVVALYWCVSITTIFLNKTLLselqldapIFVTWYQCLVSAIICFVLCqlsqqypknfsfpygnpfdtnnmrnlvpLTSCFILMLSFNNLCLKNVGVAFYYVSRSLTTVFNVILTYILLQEKTSHLAILSCFIIFSgfalgvnqegvagsfsTLGTIYGVISSFAQALFSIHtkevlpyvnDKIWLVSYYNNVYAVALFIPIIFIcgevselanyphlFSFYFWILLTIGGVFGLTIGYVTSLQiqvtsplthnisgtaKASFHTVLATYWYSEFKPLLWWISNGIILSGSATYALVKKKELDRRKDMEELL
Flexible Loop (DISEMBL)
MSSSISRYANIIFVVALYWCVSITTIFLNKTLLSELQLDAPIFVTWYQCLVSAIICFVLCQLSQQYPKNFSFPYGNPFDTNNMRNLVPLTSCFILMLSFNNLCLKNVGVAFYYVSRSLTTVFNVILTYILLQEKTSHLAILSCFIIFSGFALGVNQEGVAGSFSTLGTIYGVISSFAQALFSIHTKEVLPYVNDKIWLVSYYNNVYAVALFIPIIFICGEVSELANYPHLFSFYFWILLTIGGVFGLTIGYVTSLQIQVTSPLTHNISGTAKASFHTVLATYWYSEFKPLLWWISNGIILSGSATYalvkkkeldrrkdmeell
Low Complexity Region (SEG)
MSSSISRYANIIFVVALYWCVSITTIFLNKTLLSELQLDAPIFVTWYQCLVSAIICFVLCQLSQQYPKNFSFPYGNPFDTNNMRNLVPLTSCFILMLSFNNLCLKNVGVAFYYVSRSLTTVFNVILTYILLQEKTSHLAILSCFIIFSGFALGVNQEGVAGSFSTLGTIYGVISSFAQALFSIHTKEVLPYVNDKIWLVSYYNNVYAVALFIPIIFICGEVSELANYPHLFSFYFWILLTIGGVFGLTIGYVTSLQIQVTSPLTHNISGTAKASFHTVLATYWYSEFKPLLWWISNGIILSGSATYALVKKKELDRRKDMEELL
Disordered region (IsUnstruct)
******RYANIIFVVALYWCVSITTIFLNKTLLSELQLDAPIFVTWYQCLVSAIICFVLCQLSQQYPKNFSFPYGNPFDTNNMRNLVPLTSCFILMLSFNNLCLKNVGVAFYYVSRSLTTVFNVILTYILLQEKTSHLAILSCFIIFSGFALGVNQEGVAGSFSTLGTIYGVISSFAQALFSIHTKEVLPYVNDKIWLVSYYNNVYAVALFIPIIFICGEVSELANYPHLFSFYFWILLTIGGVFGLTIGYVTSLQIQVTSPLTHNISGTAKASFHTVLATYWYSEFKPLLWWISNGIILSGSATYALVK**************
Disordered Region (DISOPRED)
***********IFVVALYWCVSITTIFLNKTLLSELQLDAPIFVTWYQCLVSAIICFVLCQLSQQYPKNFSFPYGNPFDTNNMRNLVPLTSCFILMLSFNNLCLKNVGVAFYYVSRSLTTVFNVILTYILLQEKTSHLAILSCFIIFSGFALGVNQEGVAGSFSTLGTIYGVISSFAQALFSIHTKEVLPYVNDKIWLVSYYNNVYAVALFIPIIFICGEVSELANYPHLFSFYFWILLTIGGVFGLTIGYVTSLQIQVTSPLTHNISGTAKASFHTVLATYWYSEFKPLLWWISNGIILSGSATY******************
Disordered Region (DISEMBL)
MSSSISRYANIIFVVALYWCVSITTIFLNKTLLSELQLDAPIFVTWYQCLVSAIICFVLCQLSQQYPKNFSFPYGNPFDTNNMRNLVPLTSCFILMLSFNNLCLKNVGVAFYYVSRSLTTVFNVILTYILLQEKTSHLAILSCFIIFSGFALGVNQEGVAGSFSTLGTIYGVISSFAQALFSIHTKEVLPYVNDKIWLVSYYNNVYAVALFIPIIFICGEVSELANYPHLFSFYFWILLTIGGVFGLTIGYVTSLQIQVTSPLTHNISGTAKASFHTVLATYWYSEFKPLLWWISNGIILSGSATYALVKKKELDRRKDMEELL
Disordered Region (DISPRO)
**SSISRYANIIFVVALYWCVSITTIFLNKTLLSELQLDAPIFVTWYQCLVSAIICFVLCQLSQQYPKNFSFPYGNPFDTNNMRNLVPLTSCFILMLSFNNLCLKNVGVAFYYVSRSLTTVFNVILTYILLQEKTSHLAILSCFIIFSGFALGVNQEGVAGSFSTLGTIYGVISSFAQALFSIHTKEVLPYVNDKIWLVSYYNNVYAVALFIPIIFICGEVSELANYPHLFSFYFWILLTIGGVFGLTIGYVTSLQIQVTSPLTHNISGTAKASFHTVLATYWYSEFKPLLWWISNGIILSGSATYALVKKKEL**********
Transmembrane Helix (TMHMM)
iiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
ooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSSSISRYANIIFVVALYWCVSITTIFLNKTLLSELQLDAPIFVTWYQCLVSAIICFVLCQLSQQYPKNFSFPYGNPFDTNNMRNLVPLTSCFILMLSFNNLCLKNVGVAFYYVSRSLTTVFNVILTYILLQEKTSHLAILSCFIIFSGFALGVNQEGVAGSFSTLGTIYGVISSFAQALFSIHTKEVLPYVNDKIWLVSYYNNVYAVALFIPIIFICGEVSELANYPHLFSFYFWILLTIGGVFGLTIGYVTSLQIQVTSPLTHNISGTAKASFHTVLATYWYSEFKPLLWWISNGIILSGSATYALVKKKELDRRKDMEELL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	324	2.2.26 [Sep-21-2011]
Q9VHT4	337	Probable GDP-fucose trans	yes	N/A	0.981	0.943	0.509	1e-92
Q968A5	363	GDP-fucose transporter OS	yes	N/A	0.950	0.848	0.525	2e-88
Q8BLX4	363	GDP-fucose transporter 1	yes	N/A	0.962	0.859	0.507	5e-86
A7S1L6	339	GDP-fucose transporter 1	N/A	N/A	0.984	0.941	0.472	3e-85
A9UUB8	333	GDP-fucose transporter 1	N/A	N/A	0.975	0.948	0.467	2e-81
A6QM03	364	GDP-fucose transporter 1	yes	N/A	0.962	0.857	0.501	7e-80
Q96A29	364	GDP-fucose transporter 1	yes	N/A	0.966	0.859	0.509	1e-77
Q550W6	368	GDP-fucose transporter 1	yes	N/A	0.941	0.828	0.389	2e-53
Q9UUI8	383	Uncharacterized transport	yes	N/A	0.623	0.527	0.301	1e-13
Q8C811	405	Solute carrier family 35	no	N/A	0.722	0.577	0.272	2e-06

>sp|Q9VHT4|FUCT1_DROME Probable GDP-fucose transporter OS=Drosophila melanogaster GN=Gfr PE=2 SV=1

 Score =  340 bits (871), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 163/320 (50%), Positives = 229/320 (71%), Gaps = 2/320 (0%)

Query: 5   ISRYANIIFVVALYWCVSITTIFLNKTLLSE--LQLDAPIFVTWYQCLVSAIICFVLCQL 62
           +++Y  I FVV+LYWC SI T+F+NK LLS   + L AP+F++W+QC+VS +ICFV  +L
Sbjct: 12  VNKYLKIFFVVSLYWCTSILTVFVNKHLLSSDTVNLGAPLFMSWFQCVVSTVICFVASRL 71

Query: 63  SQQYPKNFSFPYGNPFDTNNMRNLVPLTSCFILMLSFNNLCLKNVGVAFYYVSRSLTTVF 122
           S++YP  F+FP GNP D +  R ++PL+  + LM+  NNL L  V VAFYY+ RSLTTVF
Sbjct: 72  SRKYPSVFTFPEGNPLDIDTFRKILPLSVLYTLMIGANNLSLSYVTVAFYYIGRSLTTVF 131

Query: 123 NVILTYILLQEKTSHLAILSCFIIFSGFALGVNQEGVAGSFSTLGTIYGVISSFAQALFS 182
           +V+LTY++L+++TS   +L C  I  GF LGV+QE +   FS  GTI+GV+SS A A+FS
Sbjct: 132 SVVLTYVILRQRTSFKCLLCCGAIVVGFWLGVDQESLTEVFSWRGTIFGVLSSLALAMFS 191

Query: 183 IHTKEVLPYVNDKIWLVSYYNNVYAVALFIPIIFICGEVSELANYPHLFSFYFWILLTIG 242
           I TK+ L YVN ++WL+SYYNN+Y+  LF+P+I I GE+  +  YPHL++ +FW  +T+ 
Sbjct: 192 IQTKKSLGYVNQEVWLLSYYNNLYSTLLFLPLIIINGELESIITYPHLWASWFWAAMTLS 251

Query: 243 GVFGLTIGYVTSLQIQVTSPLTHNISGTAKASFHTVLATYWYSEFKPLLWWISNGIILSG 302
           G+ G  IG+VT+L+I+VTS LTHNISGTAKA   TV+AT +Y + +  LWW SN ++L  
Sbjct: 252 GLCGFAIGFVTALEIKVTSALTHNISGTAKACAQTVIATQYYHDVRSALWWTSNVVVLVA 311

Query: 303 SATYALVKKKELDRRKDMEE 322
           SA Y  VK+ E+ R+     
Sbjct: 312 SAAYTRVKQLEMMRQHQQRS 331

Involved in GDP-fucose import from the cytoplasm into the Golgi lumen.
Drosophila melanogaster (taxid: 7227)

>sp|Q968A5|FUCT1_CAEEL GDP-fucose transporter OS=Caenorhabditis elegans GN=C50F4.14 PE=1 SV=1

 Score =  325 bits (834), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 163/310 (52%), Positives = 216/310 (69%), Gaps = 2/310 (0%)

Query: 8   YANIIFVVALYWCVSITTIFLNKTLLSELQLDAPIFVTWYQCLVSAIICFVLCQLSQQYP 67
           Y  +I  V+ YW  SI  +FLNK LLS +QLDAP+F+TWYQCLV+  +C  L + S+ Y 
Sbjct: 27  YKQVITAVSAYWVFSIGLVFLNKYLLSSVQLDAPLFITWYQCLVTVFLCLFLSKTSKAYG 86

Query: 68  KNFSFPYGNPFDTNNMRNLVPLTSCFILMLSFNNLCLKNVGVAFYYVSRSLTTVFNVILT 127
             F FP   P D    R ++PL+  F+ M+SFNNLCLK VGV+FYYV RSLTTVFNV+ T
Sbjct: 87  L-FKFP-SMPIDAKISREVLPLSVVFVAMISFNNLCLKYVGVSFYYVGRSLTTVFNVVCT 144

Query: 128 YILLQEKTSHLAILSCFIIFSGFALGVNQEGVAGSFSTLGTIYGVISSFAQALFSIHTKE 187
           Y++L +KTS  AI  C +I  GF LGV+QEGV G+ S  G I+GV++S + AL +I+T++
Sbjct: 145 YLILGQKTSGQAIGCCALIIFGFLLGVDQEGVTGTLSYTGVIFGVLASLSVALNAIYTRK 204

Query: 188 VLPYVNDKIWLVSYYNNVYAVALFIPIIFICGEVSELANYPHLFSFYFWILLTIGGVFGL 247
           VL  V D +W ++ YNN+ A+ LF+P++   GE   +  +  LF   FWIL+T+GGVFG 
Sbjct: 205 VLSSVGDCLWRLTMYNNLNALVLFLPLMLFNGEFGAVFYFDKLFDTTFWILMTLGGVFGF 264

Query: 248 TIGYVTSLQIQVTSPLTHNISGTAKASFHTVLATYWYSEFKPLLWWISNGIILSGSATYA 307
            +GYVT  QIQ TSPLTHNISGTAKA+  TV+A  WYSE K LLWW SN ++L GS  Y 
Sbjct: 265 MMGYVTGWQIQATSPLTHNISGTAKAAAQTVMAVVWYSELKTLLWWTSNFVVLFGSGMYT 324

Query: 308 LVKKKELDRR 317
            V+K+ +D++
Sbjct: 325 YVQKRVMDKK 334

Involved in GDP-fucose import from the cytoplasm into the Golgi lumen.

Caenorhabditis elegans (taxid: 6239)

>sp|Q8BLX4|FUCT1_MOUSE GDP-fucose transporter 1 OS=Mus musculus GN=Slc35c1 PE=2 SV=1

 Score =  318 bits (814), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 160/315 (50%), Positives = 220/315 (69%), Gaps = 3/315 (0%)

Query: 7   RYANIIFVVALYWCVSITTIFLNKTLLSE--LQLDAPIFVTWYQCLVSAIICFVLCQLSQ 64
           R   I  VV+LYW  SI+ +FLNK LL    LQLD PIFVT+YQCLV++++C  L  L+ 
Sbjct: 36  RALQIALVVSLYWVTSISMVFLNKYLLDSPSLQLDTPIFVTFYQCLVTSLLCKGLSTLAT 95

Query: 65  QYPKNFSFPYGNPFDTNNMRNLVPLTSCFILMLSFNNLCLKNVGVAFYYVSRSLTTVFNV 124
             P    FP  N  D    R+++PL+  FI M++FNNLCLK VGV FY V RSLTTVFNV
Sbjct: 96  CCPGMVDFPTLN-LDLKVARSVLPLSVVFIGMITFNNLCLKYVGVPFYNVGRSLTTVFNV 154

Query: 125 ILTYILLQEKTSHLAILSCFIIFSGFALGVNQEGVAGSFSTLGTIYGVISSFAQALFSIH 184
           +L+Y+LL++ TS  A+L+C +I  GF LG++QEG  G+ S  GTI+GV++S   +L +I+
Sbjct: 155 LLSYLLLKQTTSFYALLTCGVIIGGFWLGIDQEGAEGTLSLTGTIFGVLASLCVSLNAIY 214

Query: 185 TKEVLPYVNDKIWLVSYYNNVYAVALFIPIIFICGEVSELANYPHLFSFYFWILLTIGGV 244
           TK+VLP V+  IW +++YNNV A  LF+P++ + GE+  L  + HL S +FW+++T+GG+
Sbjct: 215 TKKVLPAVDHSIWRLTFYNNVNACVLFLPLMIVLGELRALLAFTHLSSAHFWLMMTLGGL 274

Query: 245 FGLTIGYVTSLQIQVTSPLTHNISGTAKASFHTVLATYWYSEFKPLLWWISNGIILSGSA 304
           FG  IGYVT LQI+ TSPLTHN+SGTAKA   TVLA  +Y E K  LWW SN ++L GS+
Sbjct: 275 FGFAIGYVTGLQIKFTSPLTHNVSGTAKACAQTVLAVLYYEEIKSFLWWTSNLMVLGGSS 334

Query: 305 TYALVKKKELDRRKD 319
            Y  V+  E+ + ++
Sbjct: 335 AYTWVRGWEMQKTQE 349

Involved in GDP-fucose import from the cytoplasm into the Golgi lumen.

Mus musculus (taxid: 10090)

>sp|A7S1L6|FUCT1_NEMVE GDP-fucose transporter 1 OS=Nematostella vectensis GN=slc35c1 PE=3 SV=1

 Score =  315 bits (806), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 152/322 (47%), Positives = 228/322 (70%), Gaps = 3/322 (0%)

Query: 2   SSSISRYANIIFVVALYWCVSITTIFLNKTLLS--ELQLDAPIFVTWYQCLVSAIICFVL 59
            S +++   I  VVA YW +SI+ +FLNK LLS  +++LDAP+FVTWYQC+V+ I  F L
Sbjct: 3   ESLLAKSVRIAAVVAAYWTISISLVFLNKYLLSSPDIKLDAPLFVTWYQCVVTVICLFFL 62

Query: 60  CQLSQQYPKNFSFPYGNPFDTNNMRNLVPLTSCFILMLSFNNLCLKNVGVAFYYVSRSLT 119
             L  +YP   +FP  +    +  + ++PL++ F+ M++FNNLCLKN+GV+FY V RSLT
Sbjct: 63  SLLGDRYPWIDTFPAFH-IKLSVAKQVLPLSAVFVGMITFNNLCLKNLGVSFYNVGRSLT 121

Query: 120 TVFNVILTYILLQEKTSHLAILSCFIIFSGFALGVNQEGVAGSFSTLGTIYGVISSFAQA 179
           TVFNVI TY++L + TS+ A++ C +I  GF +GV+QEG +G  S  G ++GV++S   +
Sbjct: 122 TVFNVICTYVILGQSTSYKAVICCAVIIGGFLMGVDQEGSSGKISYSGVLFGVLASLCVS 181

Query: 180 LFSIHTKEVLPYVNDKIWLVSYYNNVYAVALFIPIIFICGEVSELANYPHLFSFYFWILL 239
           L +I+TK+ +P V++ IW +  YNN  A  LF+P++ + GE+ E+A++P+L S YFW+++
Sbjct: 182 LNAIYTKKFIPAVDNNIWRLQLYNNFNACFLFLPLMALLGEIGEVAHFPNLSSAYFWLMM 241

Query: 240 TIGGVFGLTIGYVTSLQIQVTSPLTHNISGTAKASFHTVLATYWYSEFKPLLWWISNGII 299
           TIGGVFG+ IGY+T LQI+VTSPLTHNISGTAKA   T+++  ++ E K  LWW+SN ++
Sbjct: 242 TIGGVFGIAIGYITGLQIKVTSPLTHNISGTAKACVQTIMSVSYFHETKTALWWLSNAMV 301

Query: 300 LSGSATYALVKKKELDRRKDME 321
           L GS  Y  V+  E+ +   ++
Sbjct: 302 LGGSMAYTRVRHSEMKKAHTIQ 323

Involved in GDP-fucose import from the cytoplasm into the Golgi lumen.

Nematostella vectensis (taxid: 45351)

>sp|A9UUB8|FUCT1_MONBE GDP-fucose transporter 1 OS=Monosiga brevicollis GN=slc35c1 PE=3 SV=1

 Score =  303 bits (775), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 149/319 (46%), Positives = 219/319 (68%), Gaps = 3/319 (0%)

Query: 5   ISRYANIIFVVALYWCVSITTIFLNKTLLSELQLDAPIFVTWYQCLVSAIICFVLCQLSQ 64
           + R   I FVVALYW VSI+ +FLNK LLSE+ LDAP+FVTW+QC+V+ + CF+L +L  
Sbjct: 10  LERSIKIAFVVALYWVVSISMVFLNKYLLSEVSLDAPMFVTWFQCVVAVVTCFILGELRS 69

Query: 65  QYPKNFSFPYGNPFDTNNMRNLVPLTSCFILMLSFNNLCLKNVGVAFYYVSRSLTTVFNV 124
            +P    FP    FDT+    ++PL+  F+ M++FNNL LK VGVAFY V RSLTT+FNV
Sbjct: 70  YHPALEMFPR-FAFDTHVAMKVLPLSLVFVGMIAFNNLALKFVGVAFYNVGRSLTTIFNV 128

Query: 125 ILTYILLQEKTSHLAILSCFIIFSGFALGVNQEGVAGSFSTLGTIYGVISSFAQALFSIH 184
           +L++ +LQ++TS  A+L C +I +GF +GVN+E      +  G +YGV++S   AL +I+
Sbjct: 129 LLSFFMLQQRTSMPALLMCGVIVAGFFVGVNKEQEQADLTMAGIMYGVLASLCVALNAIY 188

Query: 185 TKEVLPYVNDKIWLVSYYNNVYAVALFIPIIFICGEVSELANYPHLFSFYFWILLTIGGV 244
            K+V+P+V++ +W ++ YNN+ A+ LF+P+I   GE+ ++A    ++S  +W L+T+ G+
Sbjct: 189 IKKVMPFVDNDMWKLTAYNNMNAIFLFLPVITFMGEIPDIAASEDVYSGNYWFLMTVAGL 248

Query: 245 FGLTIGYVTSLQIQVTSPLTHNISGTAKASFHTVLATYWYSEFKPLLWWISNGIILSGSA 304
            G+ IG V+ LQI VTSPLTHNISGT+KA   T+LA     E +   WW+ N  +L GS 
Sbjct: 249 LGIAIGLVSMLQINVTSPLTHNISGTSKACAQTILALQLNDESRTATWWLGNVFVLGGSL 308

Query: 305 TYALVKKKELDRRKDMEEL 323
            Y LVK+ E+ R  D+E++
Sbjct: 309 GYVLVKRAEMKR--DLEKV 325

Involved in GDP-fucose import from the cytoplasm into the Golgi lumen.

Monosiga brevicollis (taxid: 81824)

>sp|A6QM03|FUCT1_BOVIN GDP-fucose transporter 1 OS=Bos taurus GN=SLC35C1 PE=2 SV=1

 Score =  297 bits (761), Expect = 7e-80,   Method: Compositional matrix adjust.
 Identities = 158/315 (50%), Positives = 218/315 (69%), Gaps = 3/315 (0%)

Query: 7   RYANIIFVVALYWCVSITTIFLNKTLLSE--LQLDAPIFVTWYQCLVSAIICFVLCQLSQ 64
           R   I  VV+LYW  SI+ +FLNK LL    L+LD PIFVT+YQCLV+ ++C  L  L+ 
Sbjct: 37  RALQIALVVSLYWVTSISMVFLNKYLLDSPSLRLDTPIFVTFYQCLVTVLLCKGLSSLAT 96

Query: 65  QYPKNFSFPYGNPFDTNNMRNLVPLTSCFILMLSFNNLCLKNVGVAFYYVSRSLTTVFNV 124
             P    FP  +  D    R+++PL+  FI M++FNNLCLK VGVAFY V RSLTTVFNV
Sbjct: 97  CCPGTVDFPALH-LDLKVARSVLPLSVVFIGMITFNNLCLKYVGVAFYNVGRSLTTVFNV 155

Query: 125 ILTYILLQEKTSHLAILSCFIIFSGFALGVNQEGVAGSFSTLGTIYGVISSFAQALFSIH 184
           +L+Y+LL++ TS  A+L+C +I  GF LGV+QEG  G+ S  GT++GV++S   +L +I+
Sbjct: 156 LLSYLLLKQTTSFYALLTCSVIIGGFWLGVDQEGAEGTLSWTGTLFGVLASLCVSLNAIY 215

Query: 185 TKEVLPYVNDKIWLVSYYNNVYAVALFIPIIFICGEVSELANYPHLFSFYFWILLTIGGV 244
           TK+VLP V+  IW +++YNN  A  LF+P++   GE+  L  +P L S +FW ++T+GG+
Sbjct: 216 TKKVLPAVDGSIWRLTFYNNANACVLFLPLLLALGELRALLAFPQLGSAHFWAMMTLGGL 275

Query: 245 FGLTIGYVTSLQIQVTSPLTHNISGTAKASFHTVLATYWYSEFKPLLWWISNGIILSGSA 304
           FG  IGYVT LQI+ TSPLTHN+SGTAKA   TVLA  +Y E K  LWW SN ++L GS+
Sbjct: 276 FGFAIGYVTGLQIKFTSPLTHNVSGTAKACAQTVLAVLYYEEAKSFLWWTSNMMVLGGSS 335

Query: 305 TYALVKKKELDRRKD 319
            Y  V+ +E+ + ++
Sbjct: 336 AYTWVRGREMKKTQE 350

Involved in GDP-fucose import from the cytoplasm into the Golgi lumen.

Bos taurus (taxid: 9913)

>sp|Q96A29|FUCT1_HUMAN GDP-fucose transporter 1 OS=Homo sapiens GN=SLC35C1 PE=1 SV=1

 Score =  290 bits (741), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 162/318 (50%), Positives = 219/318 (68%), Gaps = 5/318 (1%)

Query: 7   RYANIIFVVALYWCVSITTIFLNKTLLSE--LQLDAPIFVTWYQCLVSAIICFVLCQLSQ 64
           R   I  VV+LYW  SI+ +FLNK LL    L+LD PIFVT+YQCLV+ ++C  L  L+ 
Sbjct: 37  RALQIALVVSLYWVTSISMVFLNKYLLDSPSLRLDTPIFVTFYQCLVTTLLCKGLSALAA 96

Query: 65  QYPKNFSFPYGNPFDTNNMRNLVPLTSCFILMLSFNNLCLKNVGVAFYYVSRSLTTVFNV 124
             P    FP     D    R+++PL+  FI M++FNNLCLK VGVAFY V RSLTTVFNV
Sbjct: 97  CCPGAVDFPSLR-LDLRVARSVLPLSVVFIGMITFNNLCLKYVGVAFYNVGRSLTTVFNV 155

Query: 125 ILTYILLQEKTSHLAILSCFIIFSGFALGVNQEGVAGSFSTLGTIYGVISSFAQALFSIH 184
           +L+Y+LL++ TS  A+L+C II  GF LGV+QEG  G+ S LGT++GV++S   +L +I+
Sbjct: 156 LLSYLLLKQTTSFYALLTCGIIIGGFWLGVDQEGAEGTLSWLGTVFGVLASLCVSLNAIY 215

Query: 185 TKEVLPYVNDKIWLVSYYNNVYAVALFIPIIFICGEVSELANYPHLFSFYFWILLTIGGV 244
           T +VLP V+  IW +++YNNV A  LF+P++ + GE+  L ++  L S +FW ++T+GG+
Sbjct: 216 TTKVLPAVDGSIWRLTFYNNVNACILFLPLLLLLGELQALRDFAQLGSAHFWGMMTLGGL 275

Query: 245 FGLTIGYVTSLQIQVTSPLTHNISGTAKASFHTVLATYWYSEFKPLLWWISNGIILSGSA 304
           FG  IGYVT LQI+ TSPLTHN+SGTAKA   TVLA  +Y E K  LWW SN ++L GS+
Sbjct: 276 FGFAIGYVTGLQIKFTSPLTHNVSGTAKACAQTVLAVLYYEETKSFLWWTSNMMVLGGSS 335

Query: 305 TYALVKKKELDRRKDMEE 322
            Y  V+  E+  +K  EE
Sbjct: 336 AYTWVRGWEM--KKTPEE 351

Involved in GDP-fucose import from the cytoplasm into the Golgi lumen.

Homo sapiens (taxid: 9606)

>sp|Q550W6|FUCT1_DICDI GDP-fucose transporter 1 OS=Dictyostelium discoideum GN=slc35c1 PE=3 SV=1

 Score =  209 bits (533), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 122/313 (38%), Positives = 191/313 (61%), Gaps = 8/313 (2%)

Query: 6   SRYANIIFVVALYWCVSITTIFLNKTLLSELQLDAPIFVTWYQCLVSAIICFVLCQLSQQ 65
           S  + I  V+A Y+ +SI+ +FLNK LLS+ + + P+F+TWYQ ++S +  +++  +S+ 
Sbjct: 62  SSLSTIASVIAFYFFISISLVFLNKILLSDFKFEYPLFITWYQQIISFVSIYIMTSISKS 121

Query: 66  YPKNFSFPYGNPFDTNNMRNLVPLTSCFILMLSFNNLCLKNVGVAFYYVSRSLTTVFNVI 125
            P   SF     F +     ++P+T+    M+ FNNLCL+ V V+FY V+RSLT  F++I
Sbjct: 122 VPA-LSFLPEFEFKSATASKVLPVTAVLTGMVIFNNLCLEYVEVSFYQVARSLTICFSLI 180

Query: 126 LTYILLQEKTSHLAILSCFIIFSGFALGVNQEGVAGSFSTLGTIYGVISSFAQALFSIHT 185
           LTYI+L+ KTS+ A ++C ++F GF LG   E    +FS LG I+G++SSF  AL+SI  
Sbjct: 181 LTYIVLKSKTSYRATMACLVVFLGFVLGSAGEV---NFSWLGIIFGLLSSFFVALYSIAV 237

Query: 186 KEVLPYVNDKIWLVSYYNNVYAVALFIPIIFICGEVSELANYPHLFSFYFWILLTIGGVF 245
           K VLP V+   W +S YN   ++ L  P+I + GE + + + P L+S  FW  +T+ G+ 
Sbjct: 238 KRVLPAVDGNEWRLSIYNTAISIGLIFPLILVSGEANTILDEPLLYSGTFWFYMTVAGLM 297

Query: 246 GLTIGYVTSLQIQVTSPLTHNISGTAKASFHTVLATYWYSEFKPLLWWISNGIIL--SGS 303
           G  I     +QI+ TSPLT+ ISGT KA   T+LA  ++    P+    + GI+L   GS
Sbjct: 298 GYLISISVFMQIKHTSPLTNTISGTVKACVQTILAVVFWG--NPISTQNAVGILLVIGGS 355

Query: 304 ATYALVKKKELDR 316
             Y++ +  E+ +
Sbjct: 356 FWYSMQRFFEMKK 368

Involved in GDP-fucose import from the cytoplasm into the Golgi lumen.

Dictyostelium discoideum (taxid: 44689)

>sp|Q9UUI8|YIY4_SCHPO Uncharacterized transporter C22F8.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC22F8.04 PE=3 SV=1

 Score = 77.8 bits (190), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 67/222 (30%), Positives = 114/222 (51%), Gaps = 20/222 (9%)

Query: 103 CLKNVGVAFYYVSRSLTTVFNVILTYILLQEKTSHLAILSCFIIFSGFALGVNQEGVAGS 162
           CL  V V+FY +SR L   F ++L+++LL++KT       C ++  GF  GV  E     
Sbjct: 171 CLAFVPVSFYQISRGLLLPFTILLSFVLLKQKTRLFPFGGCLLVMLGFGFGVRFE---SH 227

Query: 163 FSTLGTIYGVISSFAQALFSIHTKEVLPYVN-----DKIWLVSYYNNVYAVALFIPIIFI 217
            + +G I GV SSF  A+ S+  K    YV+     D I++ S   +V+ + L +  + +
Sbjct: 228 VAPIGIILGVWSSFTTAIESVAVKH---YVHEYPTLDLIYIFSALMSVFCLLLSVASLEL 284

Query: 218 CGEVSELANYPHLFSFYFWILLTIGGVFGLTIGYVTSLQIQVTSPLTHNISGTAKASFHT 277
              V E+     + +  F+I+L +  +    +   T  QI+VTSP+T+ IS +A++   T
Sbjct: 285 LHTVQEVVG---MQAIKFFIVLILSSLSNFYLNIATFTQIKVTSPVTYMISVSARSILQT 341

Query: 278 VLATYWYSE--FKPLLWWISNGIILSGSATYALVKKKELDRR 317
           +LA  +  E  +   ++ +   +IL G+  Y L K+ E  RR
Sbjct: 342 LLAVAFLGETLYGNRIYGVI--LILVGTLLYTLAKEHE--RR 379

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|Q8C811|S35E2_MOUSE Solute carrier family 35 member E2 OS=Mus musculus GN=Slc35e2 PE=2 SV=1

 Score = 53.5 bits (127), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 76/279 (27%), Positives = 124/279 (44%), Gaps = 45/279 (16%)

Query: 15  VALYWCVSITTIFLNKTLLSELQLDAPIFVTWYQCLVSAII----CFVLCQLSQQ----- 65
           + L++  S  T+FLNK +LS L+ + P  +   Q L + +I     FV C L Q      
Sbjct: 79  LTLWFFFSFCTLFLNKYILSLLEGE-PSMLGAVQMLSTTLIGCVKIFVPCCLYQHKTRLS 137

Query: 66  YPKNFSFPYGNPFDTNNMRNLVPLTSCFILMLSFNNL-----CLKNVGVAFYYVSRSLTT 120
           YP NF                  +T  F+ ++ F  +      LKNV V+F    +S   
Sbjct: 138 YPPNFI-----------------MTMLFVGLMRFATVVLGLVSLKNVAVSFAETVKSSAP 180

Query: 121 VFNVILTYILLQEKTSHLAILSCFIIFSGFALGVNQEGVAGSFSTLGTIYGVISSFAQAL 180
           +F VI++ ++L E T  L  LS   +  G AL    E    SF+ LG    + ++    L
Sbjct: 181 IFTVIMSRMILGEYTGLLVNLSLIPVMGGLALCTATE---ISFNILGFSAALSTNIMDCL 237

Query: 181 FSIHTKEVLPYVNDKIWL----VSYYNNVYAVALFIPIIFICGEVSELANYPHLFSF--- 233
            ++ +K++L    DK       + +Y +  AVAL IP      ++  +      FS+   
Sbjct: 238 QNVFSKKLLS--GDKYRFSAPELQFYTSAAAVALLIPAWTFFMDIPVIGRSGKSFSYSQD 295

Query: 234 YFWILLTIGGVFGLTIGYVTSLQIQVTSPLTHNISGTAK 272
              +LLT G +F L      +L  ++ SP+T +++ T K
Sbjct: 296 IVLLLLTDGALFHLQSVTAYALMGKI-SPVTFSVASTVK 333

Putative transporter.

Mus musculus (taxid: 10090)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	324
58383469	333	AGAP002393-PA [Anopheles gambiae str. PE	0.972	0.945	0.574	5e-99
312377082	333	hypothetical protein AND_11728 [Anophele	0.987	0.960	0.562	1e-98
193709262	328	PREDICTED: probable GDP-fucose transport	0.953	0.942	0.565	1e-98
157116197	335	GDP-fucose transporter, putative [Aedes	0.978	0.946	0.552	3e-96
170048126	335	GDP-fucose transporter [Culex quinquefas	0.978	0.946	0.558	3e-95
66555662	335	PREDICTED: probable GDP-fucose transport	0.981	0.949	0.531	2e-92
289743089	338	GDP-fucose transporter [Glossina morsita	0.975	0.934	0.525	3e-92
194744189	337	GF16675 [Drosophila ananassae] gi|190627	0.981	0.943	0.512	5e-92
443694488	364	hypothetical protein CAPTEDRAFT_180321 [	0.981	0.873	0.532	6e-92
195394471	337	GJ10619 [Drosophila virilis] gi|19414257	0.981	0.943	0.512	6e-92

>gi|58383469|ref|XP_312562.2| AGAP002393-PA [Anopheles gambiae str. PEST] gi|55242389|gb|EAA08101.2| AGAP002393-PA [Anopheles gambiae str. PEST]

 Score =  367 bits (941), Expect = 5e-99,   Method: Compositional matrix adjust.
 Identities = 182/317 (57%), Positives = 236/317 (74%), Gaps = 2/317 (0%)

Query: 6   SRYANIIFVVALYWCVSITTIFLNKTLLSELQLDAPIFVTWYQCLVSAIICFVLCQLSQQ 65
           ++Y  I  VVA YW +SI T+F+NK LLS L+LDAP+FVTW+Q L S+ ICF +  LS++
Sbjct: 12  TKYIRIAVVVAAYWVISILTVFVNKALLSGLKLDAPLFVTWFQVLTSSTICFTMSMLSKR 71

Query: 66  YPKNFSFPYGNPFDTNNMRNLVPLTSCFILMLSFNNLCLKNVGVAFYYVSRSLTTVFNVI 125
           YP+  SFP GNPFD    R ++PL+  F  M++ NNLCLK V VAFYYV RSLTTVFNV+
Sbjct: 72  YPRAVSFPEGNPFDRETFRKVLPLSILFTAMIATNNLCLKYVSVAFYYVGRSLTTVFNVL 131

Query: 126 LTYILLQEKTSHLAILSCFIIFSGFALGVNQEGVAGSFSTLGTIYGVISSFAQALFSIHT 185
           LTY LL +KTS  A L C +I +GF +GV+QE +  SFS +GT++GV+ S + +L+SIHT
Sbjct: 132 LTYALLGQKTSPKACLCCVMIVAGFWIGVDQESLTESFSLIGTVFGVLGSLSLSLYSIHT 191

Query: 186 KEVLPYVNDKIWLVSYYNNVYAVALFIPIIFICGEVSELANYPHLFSFYFWILLTIGGVF 245
           K  L +VN ++WL+SYYNNVY+  LFIP++ I GEV ++ANY HLF  +FW ++TIGGV 
Sbjct: 192 KRTLQHVNQEVWLLSYYNNVYSAVLFIPLMLINGEVQKVANYEHLFEGWFWGVMTIGGVC 251

Query: 246 GLTIGYVTSLQIQVTSPLTHNISGTAKASFHTVLATYWYSEFKPLLWWISNGIILSGSAT 305
           G  IG+VT+LQI+VTSPLTHNISGTAKA   TV+AT WY E K  LWW SN ++L GSA 
Sbjct: 252 GFAIGFVTTLQIKVTSPLTHNISGTAKACAQTVIATSWYQETKSFLWWTSNVVVLLGSAF 311

Query: 306 YALVKKKELDR--RKDM 320
           Y  VK+ E+D+  R+ M
Sbjct: 312 YTRVKQLEMDQTHREQM 328

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|312377082|gb|EFR23999.1| hypothetical protein AND_11728 [Anopheles darlingi]

 Score =  365 bits (938), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 180/320 (56%), Positives = 240/320 (75%)

Query: 2   SSSISRYANIIFVVALYWCVSITTIFLNKTLLSELQLDAPIFVTWYQCLVSAIICFVLCQ 61
            S + +Y  I  VVALYW VSI T+F+NK LLS L LDAP+FVTWYQ L +  ICF + +
Sbjct: 8   ESLLVKYFRIAGVVALYWFVSIVTVFVNKALLSGLNLDAPLFVTWYQVLTTTTICFTMSK 67

Query: 62  LSQQYPKNFSFPYGNPFDTNNMRNLVPLTSCFILMLSFNNLCLKNVGVAFYYVSRSLTTV 121
           LS+++P + SFP GNPFD + +R ++PL+  F  M++ NNLCLK VGVAFYYV RSLTTV
Sbjct: 68  LSKRFPNHVSFPEGNPFDRDTVRKVLPLSILFTAMIATNNLCLKYVGVAFYYVGRSLTTV 127

Query: 122 FNVILTYILLQEKTSHLAILSCFIIFSGFALGVNQEGVAGSFSTLGTIYGVISSFAQALF 181
           FNVILTY LL ++TS+ A L C +I  GF +GV+QE +  SFS +GT++GV+ S + +L+
Sbjct: 128 FNVILTYTLLGQRTSYKATLCCVLIILGFWIGVDQESLTESFSLVGTVFGVLGSLSLSLY 187

Query: 182 SIHTKEVLPYVNDKIWLVSYYNNVYAVALFIPIIFICGEVSELANYPHLFSFYFWILLTI 241
           SI+TK  L +V  ++WL+SYYNNVY+  LF+P++ + GEV E+ N+ HLF+ +FW  +T+
Sbjct: 188 SIYTKRTLQFVKQEVWLLSYYNNVYSAVLFLPLMVLNGEVREVLNFEHLFTPWFWGAMTV 247

Query: 242 GGVFGLTIGYVTSLQIQVTSPLTHNISGTAKASFHTVLATYWYSEFKPLLWWISNGIILS 301
           GG+ G  IG+VT+LQI+VTSPLTHNISGTAKA   TV+AT W+ E K LLWWISNGI+L 
Sbjct: 248 GGLCGFAIGFVTTLQIKVTSPLTHNISGTAKACAQTVIATSWFHESKSLLWWISNGIVLL 307

Query: 302 GSATYALVKKKELDRRKDME 321
           GSA Y  VK+ E+DR+   +
Sbjct: 308 GSALYTRVKQVEMDRKHRED 327

Source: Anopheles darlingi

Species: Anopheles darlingi

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|193709262|ref|XP_001949938.1| PREDICTED: probable GDP-fucose transporter-like [Acyrthosiphon pisum]

 Score =  365 bits (938), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 177/313 (56%), Positives = 241/313 (76%), Gaps = 4/313 (1%)

Query: 7   RYANIIFVVALYWCVSITTIFLNKTLLS--ELQLDAPIFVTWYQCLVSAIICFVLCQLSQ 64
           +Y  I FVV +YW +SI T+F+NKTLLS  +L +DAPIF+ W+QCLVSAIICF L +LS+
Sbjct: 9   KYIQIFFVVVIYWVISILTVFVNKTLLSIDKLDVDAPIFIAWFQCLVSAIICFTLSRLSK 68

Query: 65  QYPKNFSFPYGNPFDTNNMRNLVPLTSCFILMLSFNNLCLKNVGVAFYYVSRSLTTVFNV 124
            +P    FP GNPF+T  +R ++PL+  +ILM+S NN CLK V V FYYV RSLTTVFNV
Sbjct: 69  MFPTVVQFPEGNPFNTATVRKVLPLSILYILMISTNNYCLKFVDVTFYYVGRSLTTVFNV 128

Query: 125 ILTYILLQEKTSHLAILSCFIIFSGFALGVNQEGVAGSFSTLGTIYGVISSFAQALFSIH 184
           IL+Y++L + TS   +L CF +  GF LGV+QE ++GSFS +GT++GV+SSF+ A +SI 
Sbjct: 129 ILSYLILGQTTSISCLLCCFAVVCGFFLGVDQENLSGSFSLVGTVFGVLSSFSLAYYSIQ 188

Query: 185 TKEVLPYVNDKIWLVSYYNNVYAVALFIPIIFICGEVSELANYPHLFSFYFWILLTIGGV 244
            K+VLP VN++IWL+SY+NNVYA  LFIP++ +  E  EL+NY  L  + F +L+ IGGV
Sbjct: 189 IKKVLPDVNNQIWLLSYFNNVYATILFIPLLAL--EAKELSNYSKLTEYKFLLLMIIGGV 246

Query: 245 FGLTIGYVTSLQIQVTSPLTHNISGTAKASFHTVLATYWYSEFKPLLWWISNGIILSGSA 304
            GL+IGY+T LQ+QVTSPLTHNISGTAK+ F TVLA++WY+++K  +WW SN ++L GSA
Sbjct: 247 CGLSIGYITVLQVQVTSPLTHNISGTAKSCFQTVLASFWYNQWKSSMWWFSNFVVLGGSA 306

Query: 305 TYALVKKKELDRR 317
            Y +VK +E++++
Sbjct: 307 AYTIVKNREMEKK 319

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157116197|ref|XP_001652791.1| GDP-fucose transporter, putative [Aedes aegypti] gi|108876579|gb|EAT40804.1| AAEL007481-PA [Aedes aegypti]

 Score =  357 bits (917), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 175/317 (55%), Positives = 237/317 (74%)

Query: 5   ISRYANIIFVVALYWCVSITTIFLNKTLLSELQLDAPIFVTWYQCLVSAIICFVLCQLSQ 64
           +++Y  I+ VVA YW VSI T+F+NK LLS+L LDAP+FVTW+Q L S+ ICFV+  LS+
Sbjct: 13  LTKYLRILAVVAAYWVVSILTVFVNKALLSDLDLDAPLFVTWFQVLTSSSICFVMSALSR 72

Query: 65  QYPKNFSFPYGNPFDTNNMRNLVPLTSCFILMLSFNNLCLKNVGVAFYYVSRSLTTVFNV 124
           +YP+ F+ P GNP D + +R ++PL+  F  M++ NNLCLK V VAFYYV RSLTTVFNV
Sbjct: 73  RYPRVFNVPTGNPLDRDVLRKVLPLSLLFTAMIATNNLCLKYVEVAFYYVGRSLTTVFNV 132

Query: 125 ILTYILLQEKTSHLAILSCFIIFSGFALGVNQEGVAGSFSTLGTIYGVISSFAQALFSIH 184
           +LTY+LL +KTS  A+L C +I  GF +GV+QE +  SFS +GTI+GV+ S + +L+SI+
Sbjct: 133 VLTYLLLGQKTSGKAVLCCMLIVIGFWIGVDQESLTESFSLIGTIFGVLGSLSLSLYSIY 192

Query: 185 TKEVLPYVNDKIWLVSYYNNVYAVALFIPIIFICGEVSELANYPHLFSFYFWILLTIGGV 244
           TK  L +VN ++WL+SYYNNVY+  +FIP++ I GE   + +Y HL   +FW ++T+GG+
Sbjct: 193 TKRTLQFVNQEVWLLSYYNNVYSAVIFIPLMLINGEFRVVMDYEHLAEPWFWGVMTVGGL 252

Query: 245 FGLTIGYVTSLQIQVTSPLTHNISGTAKASFHTVLATYWYSEFKPLLWWISNGIILSGSA 304
            G  IG+VT+LQI+VTSPLTHNISGTAKA   TVLAT W+SE K  LWW SN ++L GSA
Sbjct: 253 CGFAIGFVTALQIKVTSPLTHNISGTAKACAQTVLATTWFSEVKSFLWWTSNLVVLIGSA 312

Query: 305 TYALVKKKELDRRKDME 321
            Y  VK+ E+D+R   +
Sbjct: 313 LYTRVKQLEMDQRHRQQ 329

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170048126|ref|XP_001851547.1| GDP-fucose transporter [Culex quinquefasciatus] gi|167870303|gb|EDS33686.1| GDP-fucose transporter [Culex quinquefasciatus]

 Score =  354 bits (909), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 177/317 (55%), Positives = 236/317 (74%)

Query: 5   ISRYANIIFVVALYWCVSITTIFLNKTLLSELQLDAPIFVTWYQCLVSAIICFVLCQLSQ 64
           +S+Y  I+ VVA YW +SI T+F+NK LLS L LDAP+FVTW+Q LVS+ ICFV+  LS+
Sbjct: 13  LSKYLRILTVVAAYWTISILTVFVNKALLSGLNLDAPLFVTWFQVLVSSSICFVMSSLSK 72

Query: 65  QYPKNFSFPYGNPFDTNNMRNLVPLTSCFILMLSFNNLCLKNVGVAFYYVSRSLTTVFNV 124
           +YP+  + P GNP D      ++PL+  F  M++ NNLCLK VGVAFYYV RSLTTVFNV
Sbjct: 73  RYPRFVTVPSGNPLDKETFLKVIPLSILFTAMIATNNLCLKYVGVAFYYVGRSLTTVFNV 132

Query: 125 ILTYILLQEKTSHLAILSCFIIFSGFALGVNQEGVAGSFSTLGTIYGVISSFAQALFSIH 184
           ILTY+LL +KTS  A+  C +I +GF +GV+QE +  SFS +GTI+GV+ S + +L+SI+
Sbjct: 133 ILTYLLLGQKTSGQAVGCCLLIVAGFWIGVDQESLTDSFSLIGTIFGVLGSLSLSLYSIY 192

Query: 185 TKEVLPYVNDKIWLVSYYNNVYAVALFIPIIFICGEVSELANYPHLFSFYFWILLTIGGV 244
           TK  L +VN ++WL+SYYNNVY+  +FIP++ I GE+S + NY +L   +FW ++T+GG 
Sbjct: 193 TKRTLQHVNQEVWLLSYYNNVYSAIIFIPLMLINGELSVVLNYKNLGEPWFWGVMTVGGF 252

Query: 245 FGLTIGYVTSLQIQVTSPLTHNISGTAKASFHTVLATYWYSEFKPLLWWISNGIILSGSA 304
            G  IGYVT+LQI+VTSPLTHNISGTAKA   TV+AT WY+E K LLWW SN ++L GSA
Sbjct: 253 CGFAIGYVTALQIKVTSPLTHNISGTAKACAQTVIATSWYNEAKSLLWWTSNVVVLVGSA 312

Query: 305 TYALVKKKELDRRKDME 321
            Y  VK+ E+D+R   +
Sbjct: 313 LYTRVKQLEMDQRHREQ 329

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|66555662|ref|XP_623632.1| PREDICTED: probable GDP-fucose transporter [Apis mellifera]

 Score =  345 bits (884), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 170/320 (53%), Positives = 229/320 (71%), Gaps = 2/320 (0%)

Query: 5   ISRYANIIFVVALYWCVSITTIFLNKTLLSE--LQLDAPIFVTWYQCLVSAIICFVLCQL 62
           +S++  I  VVA YW +SI TIF+NK LLS   + LDAP+F+TW QC++S  IC +L  L
Sbjct: 8   LSKFLYIAIVVATYWIISILTIFINKVLLSSHTINLDAPLFITWCQCIISLNICVILSNL 67

Query: 63  SQQYPKNFSFPYGNPFDTNNMRNLVPLTSCFILMLSFNNLCLKNVGVAFYYVSRSLTTVF 122
           S+ +P+   FP GNP+    ++ ++PL+  FI M++ NNLCLK V VAFYY+ RSLTTVF
Sbjct: 68  SKWFPRYIKFPNGNPYTKETVKKILPLSLLFIGMIATNNLCLKYVDVAFYYIGRSLTTVF 127

Query: 123 NVILTYILLQEKTSHLAILSCFIIFSGFALGVNQEGVAGSFSTLGTIYGVISSFAQALFS 182
           NVI TY +L +KTS   I  C  I  GF LGV+QE VAGS S LGTI+GV+ S   +L+S
Sbjct: 128 NVIFTYFMLGQKTSTNCIACCAFIIIGFWLGVDQEHVAGSLSVLGTIFGVLGSLTLSLYS 187

Query: 183 IHTKEVLPYVNDKIWLVSYYNNVYAVALFIPIIFICGEVSELANYPHLFSFYFWILLTIG 242
           IH K+VLP +N  IWL+SY NN Y++ +F+P+I + GE   + NY  + SFYFW+++ IG
Sbjct: 188 IHMKQVLPTLNQDIWLLSYCNNAYSIIIFLPLIIVNGEHITVYNYDKIGSFYFWLVMIIG 247

Query: 243 GVFGLTIGYVTSLQIQVTSPLTHNISGTAKASFHTVLATYWYSEFKPLLWWISNGIILSG 302
           G+ G  IGY T+LQI+VTSPLTHNISGTAKA   T+LATYW++E K  +WWISN I+LS 
Sbjct: 248 GICGFAIGYATALQIKVTSPLTHNISGTAKACVQTILATYWFNEEKSFMWWISNFIVLSA 307

Query: 303 SATYALVKKKELDRRKDMEE 322
           SA YA +++ +L ++   E+
Sbjct: 308 SAMYAKLRQLDLSKKYKEEK 327

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|289743089|gb|ADD20292.1| GDP-fucose transporter [Glossina morsitans morsitans]

 Score =  344 bits (883), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 167/318 (52%), Positives = 228/318 (71%), Gaps = 2/318 (0%)

Query: 2   SSSISRYANIIFVVALYWCVSITTIFLNKTLLSE--LQLDAPIFVTWYQCLVSAIICFVL 59
           +S + +Y  +  VV LYW +SI T+F+NK LLS   + L+AP+FVTW+QC+VSA+ICF+ 
Sbjct: 11  TSLLGKYIKVFLVVTLYWFISILTVFVNKHLLSSDTVSLEAPLFVTWFQCVVSAVICFIA 70

Query: 60  CQLSQQYPKNFSFPYGNPFDTNNMRNLVPLTSCFILMLSFNNLCLKNVGVAFYYVSRSLT 119
             L + +P   +FP GNP DT   R ++PL+  FIL +  NNLCLK VGVAFYYV RSLT
Sbjct: 71  SLLGRHFPSLVNFPEGNPLDTCTFRKMMPLSVLFILTVGANNLCLKYVGVAFYYVGRSLT 130

Query: 120 TVFNVILTYILLQEKTSHLAILSCFIIFSGFALGVNQEGVAGSFSTLGTIYGVISSFAQA 179
           TVFN++ TY+LL++KTS  +I+ C +I +GF LGVNQE    +FS  GTI+G++ S A A
Sbjct: 131 TVFNMVFTYVLLRQKTSTPSIVCCLLIVAGFMLGVNQESQTLTFSLQGTIFGILGSLALA 190

Query: 180 LFSIHTKEVLPYVNDKIWLVSYYNNVYAVALFIPIIFICGEVSELANYPHLFSFYFWILL 239
           L+SI TK+ L YVN ++WL+SYYNN+Y+  LF+P+I + GE+  +  Y  L+ F+F  ++
Sbjct: 191 LYSIQTKKSLQYVNQEVWLLSYYNNLYSSLLFLPLIILNGELEAIITYKSLYEFWFIFIM 250

Query: 240 TIGGVFGLTIGYVTSLQIQVTSPLTHNISGTAKASFHTVLATYWYSEFKPLLWWISNGII 299
             GG+ G  IG+VT+LQI+VTSPLTH ISGTAKA   TV+AT+WY + K  LWW SN I+
Sbjct: 251 LAGGLCGFAIGFVTTLQIKVTSPLTHTISGTAKACAQTVIATHWYQDKKSFLWWTSNAIV 310

Query: 300 LSGSATYALVKKKELDRR 317
           L  SA Y  VK+ E+ R+
Sbjct: 311 LLASAAYTKVKQLEMQRQ 328

Source: Glossina morsitans morsitans

Species: Glossina morsitans

Genus: Glossina

Family: Glossinidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194744189|ref|XP_001954577.1| GF16675 [Drosophila ananassae] gi|190627614|gb|EDV43138.1| GF16675 [Drosophila ananassae]

 Score =  343 bits (881), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 164/320 (51%), Positives = 230/320 (71%), Gaps = 2/320 (0%)

Query: 5   ISRYANIIFVVALYWCVSITTIFLNKTLLSE--LQLDAPIFVTWYQCLVSAIICFVLCQL 62
           +++Y  I FVVALYW  SI T+F+NK LLS   + L AP+F++W+QC+VS +ICFV+ +L
Sbjct: 12  VNKYLKIFFVVALYWVTSILTVFVNKHLLSSDTVNLGAPLFMSWFQCVVSTVICFVMSRL 71

Query: 63  SQQYPKNFSFPYGNPFDTNNMRNLVPLTSCFILMLSFNNLCLKNVGVAFYYVSRSLTTVF 122
           S++YP  F+FP GNP D +  R ++PL+  + LM+  NNL L  V VAFYY+ RSLTTVF
Sbjct: 72  SRKYPSVFTFPEGNPLDIDTFRKILPLSGLYTLMIGANNLSLSYVTVAFYYIGRSLTTVF 131

Query: 123 NVILTYILLQEKTSHLAILSCFIIFSGFALGVNQEGVAGSFSTLGTIYGVISSFAQALFS 182
           +V+LTY++L+++TS   +L C  I  GF LGV+QE +   FS  GTI+GV+SS A A+FS
Sbjct: 132 SVVLTYVILRQRTSFKCLLCCAAIVVGFWLGVDQESLTEVFSWRGTIFGVLSSLALAMFS 191

Query: 183 IHTKEVLPYVNDKIWLVSYYNNVYAVALFIPIIFICGEVSELANYPHLFSFYFWILLTIG 242
           I TK+ L +VN ++WL+SYYNN+Y+  LF+P+I I GE+  +  YPHLF+ +FW  +T+ 
Sbjct: 192 IQTKKSLGHVNQEVWLLSYYNNLYSTLLFLPLIIINGELETIITYPHLFASWFWAAMTLS 251

Query: 243 GVFGLTIGYVTSLQIQVTSPLTHNISGTAKASFHTVLATYWYSEFKPLLWWISNGIILSG 302
           G+ G  IG+VT+L+I+VTSPLTHNISGTAKA   TV+AT +Y + +  LWW SN ++L  
Sbjct: 252 GICGFAIGFVTALEIKVTSPLTHNISGTAKACAQTVIATQYYHDVRSALWWTSNVVVLVA 311

Query: 303 SATYALVKKKELDRRKDMEE 322
           SA Y  VK+ E+ R+     
Sbjct: 312 SAAYTRVKQLEMLRQHQQRN 331

Source: Drosophila ananassae

Species: Drosophila ananassae

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|443694488|gb|ELT95609.1| hypothetical protein CAPTEDRAFT_180321 [Capitella teleta]

 Score =  343 bits (880), Expect = 6e-92,   Method: Compositional matrix adjust.
 Identities = 171/321 (53%), Positives = 233/321 (72%), Gaps = 3/321 (0%)

Query: 1   MSSSISRYANIIFVVALYWCVSITTIFLNKTLLS--ELQLDAPIFVTWYQCLVSAIICFV 58
           M S  ++   I+  VA YW VSIT +FLNK LLS  +L+LDAP+FVTW+QC+VS  +C +
Sbjct: 22  MESFFAKSMRIVTAVAAYWVVSITLVFLNKYLLSSPDLKLDAPLFVTWFQCVVSVALCVI 81

Query: 59  LCQLSQQYPKNFSFPYGNPFDTNNMRNLVPLTSCFILMLSFNNLCLKNVGVAFYYVSRSL 118
           L  L++ +P+  SFP    FD    R ++PL+  F+ M+SFNNLCLK VGVAFYYV RSL
Sbjct: 82  LSILAKLFPQTISFP-DCKFDAKIAREILPLSIVFVGMISFNNLCLKYVGVAFYYVGRSL 140

Query: 119 TTVFNVILTYILLQEKTSHLAILSCFIIFSGFALGVNQEGVAGSFSTLGTIYGVISSFAQ 178
           TTV NV L+Y++L++ TS  AI+ C II +GF LGV+QEGV+GS S +G I+GV +S   
Sbjct: 141 TTVCNVGLSYVILKQTTSWKAIVCCLIIIAGFLLGVDQEGVSGSLSVIGVIFGVCASMCV 200

Query: 179 ALFSIHTKEVLPYVNDKIWLVSYYNNVYAVALFIPIIFICGEVSELANYPHLFSFYFWIL 238
           A++SI+TK+VLP+V+D +W +++YNNV AV LF+P++FI G+  +L  + +L    FW++
Sbjct: 201 AMYSIYTKKVLPFVDDNVWKLTFYNNVNAVILFLPLMFISGDFGQLLAFENLSLPSFWVV 260

Query: 239 LTIGGVFGLTIGYVTSLQIQVTSPLTHNISGTAKASFHTVLATYWYSEFKPLLWWISNGI 298
           + + GVFG  IGYVT LQI+VTSPLTHNISGTAKA   TVLAT +Y ++KP LWW+SN +
Sbjct: 261 MLLSGVFGFAIGYVTGLQIKVTSPLTHNISGTAKACAQTVLATAYYLDYKPSLWWLSNFV 320

Query: 299 ILSGSATYALVKKKELDRRKD 319
           +L GS  Y  VK+ E+    D
Sbjct: 321 VLFGSGAYTQVKRSEMREAHD 341

Source: Capitella teleta

Species: Capitella teleta

Genus: Capitella

Family: Capitellidae

Order: Capitellida

Class: Polychaeta

Phylum: Annelida

Superkingdom: Eukaryota

>gi|195394471|ref|XP_002055866.1| GJ10619 [Drosophila virilis] gi|194142575|gb|EDW58978.1| GJ10619 [Drosophila virilis]

 Score =  343 bits (880), Expect = 6e-92,   Method: Compositional matrix adjust.
 Identities = 164/320 (51%), Positives = 232/320 (72%), Gaps = 2/320 (0%)

Query: 5   ISRYANIIFVVALYWCVSITTIFLNKTLLSE--LQLDAPIFVTWYQCLVSAIICFVLCQL 62
           +++Y  I FVVALYWC SI T+F+NK LLS   + L AP+F++WYQC++S +ICFV+ +L
Sbjct: 12  VNKYLKIFFVVALYWCTSILTVFVNKHLLSSETVNLGAPLFMSWYQCVISTVICFVMSRL 71

Query: 63  SQQYPKNFSFPYGNPFDTNNMRNLVPLTSCFILMLSFNNLCLKNVGVAFYYVSRSLTTVF 122
           S++YP  FSFP G+P D +  R L+PLT  + LM+  NNL L  V VAFYY+ RSLTTVF
Sbjct: 72  SRKYPSVFSFPEGDPLDIDTFRKLLPLTVLYTLMIGANNLSLAYVTVAFYYIGRSLTTVF 131

Query: 123 NVILTYILLQEKTSHLAILSCFIIFSGFALGVNQEGVAGSFSTLGTIYGVISSFAQALFS 182
           +V+LTY++L+++TS   +L C  I  GF LGV+QE +  +FS  GTI+GV+SS A A++S
Sbjct: 132 SVVLTYVILRQRTSFKCLLCCATIVVGFWLGVDQESLTTAFSWRGTIFGVLSSLALAMYS 191

Query: 183 IHTKEVLPYVNDKIWLVSYYNNVYAVALFIPIIFICGEVSELANYPHLFSFYFWILLTIG 242
           I TK+ L YVN +IWL+SYYNN+Y+  LF+P+I + GE+  +  YPHL++ +FW  +T+ 
Sbjct: 192 IQTKKSLGYVNQEIWLLSYYNNLYSTLLFLPLIILNGELGTIWAYPHLWAAWFWAAMTLS 251

Query: 243 GVFGLTIGYVTSLQIQVTSPLTHNISGTAKASFHTVLATYWYSEFKPLLWWISNGIILSG 302
           G  G  IG+VT+L+I+VTSPLTHNISGTAKA   TV+AT +Y++ +  +WW SN ++L  
Sbjct: 252 GFCGFAIGFVTALEIKVTSPLTHNISGTAKACAQTVIATQYYNDVRSAIWWTSNIVVLVA 311

Query: 303 SATYALVKKKELDRRKDMEE 322
           SA Y  VK+ E+ ++     
Sbjct: 312 SAAYTRVKQLEMLQQHQQRS 331

Source: Drosophila virilis

Species: Drosophila virilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	324
WB|WBGene00008237	363	nstp-10 [Caenorhabditis elegan	0.950	0.848	0.525	1.1e-85
RGD|1309463	404	Slc35c1 "solute carrier family	0.962	0.772	0.514	1e-82
MGI|MGI:2443301	363	Slc35c1 "solute carrier family	0.962	0.859	0.507	4.5e-82
ZFIN|ZDB-GENE-041212-11	348	slc35c1 "solute carrier family	0.950	0.885	0.517	1.2e-81
UNIPROTKB|A6QM03	364	SLC35C1 "GDP-fucose transporte	0.972	0.865	0.503	3.2e-81
UNIPROTKB|F1SHJ7	371	FUCT1 "Uncharacterized protein	0.969	0.846	0.507	4.1e-81
UNIPROTKB|J9NWS1	351	SLC35C1 "Uncharacterized prote	0.953	0.880	0.516	6.6e-81
UNIPROTKB|B2RDB2	351	SLC35C1 "cDNA, FLJ96534, highl	0.966	0.891	0.509	6e-80
UNIPROTKB|Q96A29	364	SLC35C1 "GDP-fucose transporte	0.966	0.859	0.509	6e-80
UNIPROTKB|E1BV92	365	SLC35C1 "Uncharacterized prote	0.969	0.860	0.503	5e-76

WB|WBGene00008237 nstp-10 [Caenorhabditis elegans (taxid:6239)]

 Score = 857 (306.7 bits), Expect = 1.1e-85, P = 1.1e-85
 Identities = 163/310 (52%), Positives = 216/310 (69%)

Query:     8 YANIIFVVALYWCVSITTIFLNKTLLSELQLDAPIFVTWYQCLVSAIICFVLCQLSQQYP 67
             Y  +I  V+ YW  SI  +FLNK LLS +QLDAP+F+TWYQCLV+  +C  L + S+ Y 
Sbjct:    27 YKQVITAVSAYWVFSIGLVFLNKYLLSSVQLDAPLFITWYQCLVTVFLCLFLSKTSKAYG 86

Query:    68 KNFSFPYGNPFDTNNMRNLVPLTSCFILMLSFNNLCLKNVGVAFYYVSRSLTTVFNVILT 127
               F FP   P D    R ++PL+  F+ M+SFNNLCLK VGV+FYYV RSLTTVFNV+ T
Sbjct:    87 L-FKFP-SMPIDAKISREVLPLSVVFVAMISFNNLCLKYVGVSFYYVGRSLTTVFNVVCT 144

Query:   128 YILLQEKTSHLAILSCFIIFSGFALGVNQEGVAGSFSTLGTIYGVISSFAQALFSIHTKE 187
             Y++L +KTS  AI  C +I  GF LGV+QEGV G+ S  G I+GV++S + AL +I+T++
Sbjct:   145 YLILGQKTSGQAIGCCALIIFGFLLGVDQEGVTGTLSYTGVIFGVLASLSVALNAIYTRK 204

Query:   188 VLPYVNDKIWLVSYYNNVYAVALFIPIIFICGEVSELANYPHLFSFYFWILLTIGGVFGL 247
             VL  V D +W ++ YNN+ A+ LF+P++   GE   +  +  LF   FWIL+T+GGVFG 
Sbjct:   205 VLSSVGDCLWRLTMYNNLNALVLFLPLMLFNGEFGAVFYFDKLFDTTFWILMTLGGVFGF 264

Query:   248 TIGYVTSLQIQVTSPLTHNISGTAKASFHTVLATYWYSEFKPLLWWISNGIILSGSATYA 307
              +GYVT  QIQ TSPLTHNISGTAKA+  TV+A  WYSE K LLWW SN ++L GS  Y 
Sbjct:   265 MMGYVTGWQIQATSPLTHNISGTAKAAAQTVMAVVWYSELKTLLWWTSNFVVLFGSGMYT 324

Query:   308 LVKKKELDRR 317
              V+K+ +D++
Sbjct:   325 YVQKRVMDKK 334

GO:0055085 "transmembrane transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

RGD|1309463 Slc35c1 "solute carrier family 35, member C1" [Rattus norvegicus (taxid:10116)]

 Score = 829 (296.9 bits), Expect = 1.0e-82, P = 1.0e-82
 Identities = 162/315 (51%), Positives = 221/315 (70%)

Query:     7 RYANIIFVVALYWCVSITTIFLNKTLLSE--LQLDAPIFVTWYQCLVSAIICFVLCQLSQ 64
             R   I  VV+LYW  SI+ +FLNK LL    LQLD PIFVT+YQCLV++++C  L  L+ 
Sbjct:    77 RALQIALVVSLYWVTSISMVFLNKYLLDSPSLQLDTPIFVTFYQCLVTSLLCKGLSTLAT 136

Query:    65 QYPKNFSFPYGNPFDTNNMRNLVPLTSCFILMLSFNNLCLKNVGVAFYYVSRSLTTVFNV 124
               P    FP  N  D    R+++PL+  FI M++FNNLCLK VGVAFY V RSLTTVFNV
Sbjct:   137 CCPGMVDFPTLN-LDLKVARSVLPLSVVFIGMITFNNLCLKYVGVAFYNVGRSLTTVFNV 195

Query:   125 ILTYILLQEKTSHLAILSCFIIFSGFALGVNQEGVAGSFSTLGTIYGVISSFAQALFSIH 184
             +L+Y+LL++ TS  A+L+C II  GF LG++QEG  G+ S  GTI+GV++S   +L +I+
Sbjct:   196 LLSYLLLKQTTSFYALLTCAIIIGGFWLGIDQEGAEGTLSLTGTIFGVLASLCVSLNAIY 255

Query:   185 TKEVLPYVNDKIWLVSYYNNVYAVALFIPIIFICGEVSELANYPHLFSFYFWILLTIGGV 244
             TK+VLP V+  IW +++YNNV A  LF+P++ + GE+  L  + HL S +FW+++T+GG+
Sbjct:   256 TKKVLPAVDHSIWRLTFYNNVNACVLFLPLMVVLGELHALLAFAHLNSAHFWVMMTLGGL 315

Query:   245 FGLTIGYVTSLQIQVTSPLTHNISGTAKASFHTVLATYWYSEFKPLLWWISNGIILSGSA 304
             FG  IGYVT LQI+ TSPLTHN+SGTAKA   TVLA  +Y E K  LWW SN ++L GS+
Sbjct:   316 FGFAIGYVTGLQIKFTSPLTHNVSGTAKACAQTVLAVLYYEEIKSFLWWTSNLMVLGGSS 375

Query:   305 TYALVKKKELDRRKD 319
              Y  V+  E+ + ++
Sbjct:   376 AYTWVRGWEMQKTQE 390

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016021 "integral to membrane" evidence=IEA

GO:0030259 "lipid glycosylation" evidence=ISO

GO:0045746 "negative regulation of Notch signaling pathway" evidence=ISO

GO:2000460 "regulation of eukaryotic cell surface binding" evidence=ISO

MGI|MGI:2443301 Slc35c1 "solute carrier family 35, member C1" [Mus musculus (taxid:10090)]

 Score = 823 (294.8 bits), Expect = 4.5e-82, P = 4.5e-82
 Identities = 160/315 (50%), Positives = 220/315 (69%)

Query:     7 RYANIIFVVALYWCVSITTIFLNKTLLSE--LQLDAPIFVTWYQCLVSAIICFVLCQLSQ 64
             R   I  VV+LYW  SI+ +FLNK LL    LQLD PIFVT+YQCLV++++C  L  L+ 
Sbjct:    36 RALQIALVVSLYWVTSISMVFLNKYLLDSPSLQLDTPIFVTFYQCLVTSLLCKGLSTLAT 95

Query:    65 QYPKNFSFPYGNPFDTNNMRNLVPLTSCFILMLSFNNLCLKNVGVAFYYVSRSLTTVFNV 124
               P    FP  N  D    R+++PL+  FI M++FNNLCLK VGV FY V RSLTTVFNV
Sbjct:    96 CCPGMVDFPTLN-LDLKVARSVLPLSVVFIGMITFNNLCLKYVGVPFYNVGRSLTTVFNV 154

Query:   125 ILTYILLQEKTSHLAILSCFIIFSGFALGVNQEGVAGSFSTLGTIYGVISSFAQALFSIH 184
             +L+Y+LL++ TS  A+L+C +I  GF LG++QEG  G+ S  GTI+GV++S   +L +I+
Sbjct:   155 LLSYLLLKQTTSFYALLTCGVIIGGFWLGIDQEGAEGTLSLTGTIFGVLASLCVSLNAIY 214

Query:   185 TKEVLPYVNDKIWLVSYYNNVYAVALFIPIIFICGEVSELANYPHLFSFYFWILLTIGGV 244
             TK+VLP V+  IW +++YNNV A  LF+P++ + GE+  L  + HL S +FW+++T+GG+
Sbjct:   215 TKKVLPAVDHSIWRLTFYNNVNACVLFLPLMIVLGELRALLAFTHLSSAHFWLMMTLGGL 274

Query:   245 FGLTIGYVTSLQIQVTSPLTHNISGTAKASFHTVLATYWYSEFKPLLWWISNGIILSGSA 304
             FG  IGYVT LQI+ TSPLTHN+SGTAKA   TVLA  +Y E K  LWW SN ++L GS+
Sbjct:   275 FGFAIGYVTGLQIKFTSPLTHNVSGTAKACAQTVLAVLYYEEIKSFLWWTSNLMVLGGSS 334

Query:   305 TYALVKKKELDRRKD 319
              Y  V+  E+ + ++
Sbjct:   335 AYTWVRGWEMQKTQE 349

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0008643 "carbohydrate transport" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0030259 "lipid glycosylation" evidence=IMP

GO:0045746 "negative regulation of Notch signaling pathway" evidence=IMP

GO:2000460 "regulation of eukaryotic cell surface binding" evidence=IMP

ZFIN|ZDB-GENE-041212-11 slc35c1 "solute carrier family 35, member C1" [Danio rerio (taxid:7955)]

 Score = 819 (293.4 bits), Expect = 1.2e-81, P = 1.2e-81
 Identities = 161/311 (51%), Positives = 213/311 (68%)

Query:     7 RYANIIFVVALYWCVSITTIFLNKTLLSELQLDAPIFVTWYQCLVSAIICFVLCQLSQQY 66
             R   I  VV LYW +SI+ +FLN  LL   +LDAP+F+T++QC+VS  +C ++  LS   
Sbjct:    19 RATKIALVVTLYWFISISMVFLNNYLLDSKELDAPVFITFFQCVVSVGLCLLMSFLSSLC 78

Query:    67 PKNFSFPYGNPFDTNNMRNLVPLTSCFILMLSFNNLCLKNVGVAFYYVSRSLTTVFNVIL 126
             P +  FP    FD    R ++PLT  FI M++FNNLCLK VGVAFY V RSL+TVFNVIL
Sbjct:    79 PGSVDFP-SLKFDLRVSREILPLTIVFISMITFNNLCLKYVGVAFYTVGRSLSTVFNVIL 137

Query:   127 TYILLQEKTSHLAILSCFIIFSGFALGVNQEGVAGSFSTLGTIYGVISSFAQALFSIHTK 186
             +Y++L++ TS  A+L C +I  GF LGV+QE VAGS S  G ++GVI+S   +L +I TK
Sbjct:   138 SYVVLKQTTSLYAVLCCGVILGGFWLGVDQEAVAGSLSWAGVVFGVIASLCVSLNAIFTK 197

Query:   187 EVLPYVNDKIWLVSYYNNVYAVALFIPIIFICGEVSELANYPHLFSFYFWILLTIGGVFG 246
             +VLP V+  IW +SYYNN+ A+ LF+P++ I GEV  +  +  L   +FW ++T+GGVFG
Sbjct:   198 KVLPVVDGNIWKLSYYNNLNAIVLFLPLLIILGEVKSVFEFSRLTDLHFWGMMTLGGVFG 257

Query:   247 LTIGYVTSLQIQVTSPLTHNISGTAKASFHTVLAT-YWYSEFKPLLWWISNGIILSGSAT 305
               IGYVT LQI+ TSPLTHN+SGTAK+   TVLA  YW SE K  LWW SN ++L GS  
Sbjct:   258 FAIGYVTGLQIKFTSPLTHNVSGTAKSCAQTVLAVVYWASE-KSTLWWTSNLMVLGGSFA 316

Query:   306 YALVKKKELDR 316
             Y  VK  E+ +
Sbjct:   317 YTWVKGMEMKK 327

GO:0016020 "membrane" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|A6QM03 SLC35C1 "GDP-fucose transporter 1" [Bos taurus (taxid:9913)]

 Score = 815 (292.0 bits), Expect = 3.2e-81, P = 3.2e-81
 Identities = 161/320 (50%), Positives = 220/320 (68%)

Query:     5 ISRYANIIFVVALYWCVSITTIFLNKTLLSE--LQLDAPIFVTWYQCLVSAIICFVLCQL 62
             + R   I  VV+LYW  SI+ +FLNK LL    L+LD PIFVT+YQCLV+ ++C  L  L
Sbjct:    35 VLRALQIALVVSLYWVTSISMVFLNKYLLDSPSLRLDTPIFVTFYQCLVTVLLCKGLSSL 94

Query:    63 SQQYPKNFSFPYGNPFDTNNMRNLVPLTSCFILMLSFNNLCLKNVGVAFYYVSRSLTTVF 122
             +   P    FP  +  D    R+++PL+  FI M++FNNLCLK VGVAFY V RSLTTVF
Sbjct:    95 ATCCPGTVDFPALH-LDLKVARSVLPLSVVFIGMITFNNLCLKYVGVAFYNVGRSLTTVF 153

Query:   123 NVILTYILLQEKTSHLAILSCFIIFSGFALGVNQEGVAGSFSTLGTIYGVISSFAQALFS 182
             NV+L+Y+LL++ TS  A+L+C +I  GF LGV+QEG  G+ S  GT++GV++S   +L +
Sbjct:   154 NVLLSYLLLKQTTSFYALLTCSVIIGGFWLGVDQEGAEGTLSWTGTLFGVLASLCVSLNA 213

Query:   183 IHTKEVLPYVNDKIWLVSYYNNVYAVALFIPIIFICGEVSELANYPHLFSFYFWILLTIG 242
             I+TK+VLP V+  IW +++YNN  A  LF+P++   GE+  L  +P L S +FW ++T+G
Sbjct:   214 IYTKKVLPAVDGSIWRLTFYNNANACVLFLPLLLALGELRALLAFPQLGSAHFWAMMTLG 273

Query:   243 GVFGLTIGYVTSLQIQVTSPLTHNISGTAKASFHTVLATYWYSEFKPLLWWISNGIILSG 302
             G+FG  IGYVT LQI+ TSPLTHN+SGTAKA   TVLA  +Y E K  LWW SN ++L G
Sbjct:   274 GLFGFAIGYVTGLQIKFTSPLTHNVSGTAKACAQTVLAVLYYEEAKSFLWWTSNMMVLGG 333

Query:   303 SATYALVKKKELDRRKDMEE 322
             S+ Y  V+ +E+  +K  EE
Sbjct:   334 SSAYTWVRGREM--KKTQEE 351

GO:0000139 "Golgi membrane" evidence=IEA

GO:0030259 "lipid glycosylation" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0008643 "carbohydrate transport" evidence=IEA

UNIPROTKB|F1SHJ7 FUCT1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 814 (291.6 bits), Expect = 4.1e-81, P = 4.1e-81
 Identities = 161/317 (50%), Positives = 221/317 (69%)

Query:     5 ISRYANIIFVVALYWCVSITTIFLNKTLLSE--LQLDAPIFVTWYQCLVSAIICFVLCQL 62
             + R   I  VV+LYW  SI+ +FLNK LL    LQLD PIFVT+YQCLV+A++C  L  L
Sbjct:    43 VLRALQIALVVSLYWVTSISMVFLNKYLLDSPSLQLDTPIFVTFYQCLVTALLCKGLSTL 102

Query:    63 SQQYPKNFSFPYGNPFDTNNMRNLVPLTSCFILMLSFNNLCLKNVGVAFYYVSRSLTTVF 122
             +  +P    FP  +  D    R+++PL+  FI M++FNNLCLK VGVAFY V RSLTTVF
Sbjct:   103 ATCWPGAVDFPTLH-LDLRVARSILPLSVVFIGMITFNNLCLKYVGVAFYNVGRSLTTVF 161

Query:   123 NVILTYILLQEKTSHLAILSCFIIFSGFALGVNQEGVAGSFSTLGTIYGVISSFAQALFS 182
             NV+L+Y+LL++ TS  A+L+C  I  GF LGV+QEG  G+ S  GT++GV++S   +L +
Sbjct:   162 NVLLSYLLLKQTTSFYALLTCGTIIGGFWLGVDQEGAEGTLSWTGTVFGVLASLCVSLNA 221

Query:   183 IHTKEVLPYVNDKIWLVSYYNNVYAVALFIPIIFICGEVSELANYPHLFSFYFWILLTIG 242
             I+TK+VLP V+  IW +++YNNV A  LF+P++ + GE+  L ++P L S +FW ++T+G
Sbjct:   222 IYTKKVLPAVDGSIWRLTFYNNVNACILFLPLLLLLGELRALHHFPLLTSAHFWGMMTLG 281

Query:   243 GVFGLTIGYVTSLQIQVTSPLTHNISGTAKASFHTVLATYWYSEFKPLLWWISNGIILSG 302
             G+FG  IGYVT LQI+ TSPLTHN+SGTAKA   TVLA  +Y + K  LWW SN ++L G
Sbjct:   282 GLFGFAIGYVTGLQIKFTSPLTHNVSGTAKACAQTVLAVLYYEDTKSFLWWASNMMVLGG 341

Query:   303 SATYALVKKKELDRRKD 319
             S  Y  V+  E+  ++D
Sbjct:   342 SFAYTWVRGWEMKTQED 358

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|J9NWS1 SLC35C1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 812 (290.9 bits), Expect = 6.6e-81, P = 6.6e-81
 Identities = 161/312 (51%), Positives = 216/312 (69%)

Query:     7 RYANIIFVVALYWCVSITTIFLNKTLLSE--LQLDAPIFVTWYQCLVSAIICFVLCQLSQ 64
             R   I  VV+LYW  SI+ +FLNK LL    LQLD PIFVT+YQCLV+ ++C  L  L+ 
Sbjct:    24 RALQITLVVSLYWVTSISMVFLNKYLLDSPSLQLDTPIFVTFYQCLVTTLLCKSLSTLAA 83

Query:    65 QYPKNFSFPYGNPFDTNNMRNLVPLTSCFILMLSFNNLCLKNVGVAFYYVSRSLTTVFNV 124
               P    FP     D    R+++PL+  FI M++FNNLCLK VGVAFY V RSLTTVFNV
Sbjct:    84 FCPGAMDFPTLR-LDLRVARSVLPLSVVFIGMITFNNLCLKYVGVAFYNVGRSLTTVFNV 142

Query:   125 ILTYILLQEKTSHLAILSCFIIFSGFALGVNQEGVAGSFSTLGTIYGVISSFAQALFSIH 184
             +L+Y+LL++ TS  A+L+C II  GF LGV+QEG  G+ S  GT++GV++S   +L +I+
Sbjct:   143 LLSYLLLKQTTSFYALLTCGIIIGGFWLGVDQEGAEGTLSWTGTLFGVLASLCVSLNAIY 202

Query:   185 TKEVLPYVNDKIWLVSYYNNVYAVALFIPIIFICGEVSELANYPHLFSFYFWILLTIGGV 244
             TK+VLP V+  IW +++YNNV A  LF+P++ + GE+  L N+  L S +FW ++T+GG+
Sbjct:   203 TKKVLPAVDGSIWRLTFYNNVNACVLFLPLLLLLGELQTLLNFSQLGSAHFWGMMTLGGL 262

Query:   245 FGLTIGYVTSLQIQVTSPLTHNISGTAKASFHTVLATYWYSEFKPLLWWISNGIILSGSA 304
             FG  IGYVT LQI+ TSPLTHN+SGTAKA   TVLA  +Y E K  LWW SN ++L GS+
Sbjct:   263 FGFAIGYVTGLQIKFTSPLTHNVSGTAKACAQTVLAVLYYEETKSFLWWTSNMMVLGGSS 322

Query:   305 TYALVKKKELDR 316
              Y  V+  E+ +
Sbjct:   323 AYTWVRGWEMKK 334

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|B2RDB2 SLC35C1 "cDNA, FLJ96534, highly similar to Homo sapiens GDP-fucose transporter 1, mRNA" [Homo sapiens (taxid:9606)]

 Score = 803 (287.7 bits), Expect = 6.0e-80, P = 6.0e-80
 Identities = 162/318 (50%), Positives = 219/318 (68%)

Query:     7 RYANIIFVVALYWCVSITTIFLNKTLLSE--LQLDAPIFVTWYQCLVSAIICFVLCQLSQ 64
             R   I  VV+LYW  SI+ +FLNK LL    L+LD PIFVT+YQCLV+ ++C  L  L+ 
Sbjct:    24 RALQIALVVSLYWVTSISMVFLNKYLLDSPSLRLDTPIFVTFYQCLVTTLLCKGLSALAA 83

Query:    65 QYPKNFSFPYGNPFDTNNMRNLVPLTSCFILMLSFNNLCLKNVGVAFYYVSRSLTTVFNV 124
               P    FP     D    R+++PL+  FI M++FNNLCLK VGVAFY V RSLTTVFNV
Sbjct:    84 CCPGAVDFP-SLRLDLRVARSVLPLSVVFIGMITFNNLCLKYVGVAFYNVGRSLTTVFNV 142

Query:   125 ILTYILLQEKTSHLAILSCFIIFSGFALGVNQEGVAGSFSTLGTIYGVISSFAQALFSIH 184
             +L+Y+LL++ TS  A+L+C II  GF LGV+QEG  G+ S LGT++GV++S   +L +I+
Sbjct:   143 LLSYLLLKQTTSFYALLTCGIIIGGFWLGVDQEGAEGTLSWLGTVFGVLASLCVSLNAIY 202

Query:   185 TKEVLPYVNDKIWLVSYYNNVYAVALFIPIIFICGEVSELANYPHLFSFYFWILLTIGGV 244
             T +VLP V+  IW +++YNNV A  LF+P++ + GE+  L ++  L S +FW ++T+GG+
Sbjct:   203 TTKVLPAVDGSIWRLTFYNNVNACILFLPLLLLLGELQALRDFAQLGSAHFWGMMTLGGL 262

Query:   245 FGLTIGYVTSLQIQVTSPLTHNISGTAKASFHTVLATYWYSEFKPLLWWISNGIILSGSA 304
             FG  IGYVT LQI+ TSPLTHN+SGTAKA   TVLA  +Y E K  LWW SN ++L GS+
Sbjct:   263 FGFAIGYVTGLQIKFTSPLTHNVSGTAKACAQTVLAVLYYEETKSFLWWTSNMMVLGGSS 322

Query:   305 TYALVKKKELDRRKDMEE 322
              Y  V+  E+  +K  EE
Sbjct:   323 AYTWVRGWEM--KKTPEE 338

GO:0016021 "integral to membrane" evidence=IEA

GO:0030259 "lipid glycosylation" evidence=IEA

UNIPROTKB|Q96A29 SLC35C1 "GDP-fucose transporter 1" [Homo sapiens (taxid:9606)]

 Score = 803 (287.7 bits), Expect = 6.0e-80, P = 6.0e-80
 Identities = 162/318 (50%), Positives = 219/318 (68%)

Query:     7 RYANIIFVVALYWCVSITTIFLNKTLLSE--LQLDAPIFVTWYQCLVSAIICFVLCQLSQ 64
             R   I  VV+LYW  SI+ +FLNK LL    L+LD PIFVT+YQCLV+ ++C  L  L+ 
Sbjct:    37 RALQIALVVSLYWVTSISMVFLNKYLLDSPSLRLDTPIFVTFYQCLVTTLLCKGLSALAA 96

Query:    65 QYPKNFSFPYGNPFDTNNMRNLVPLTSCFILMLSFNNLCLKNVGVAFYYVSRSLTTVFNV 124
               P    FP     D    R+++PL+  FI M++FNNLCLK VGVAFY V RSLTTVFNV
Sbjct:    97 CCPGAVDFP-SLRLDLRVARSVLPLSVVFIGMITFNNLCLKYVGVAFYNVGRSLTTVFNV 155

Query:   125 ILTYILLQEKTSHLAILSCFIIFSGFALGVNQEGVAGSFSTLGTIYGVISSFAQALFSIH 184
             +L+Y+LL++ TS  A+L+C II  GF LGV+QEG  G+ S LGT++GV++S   +L +I+
Sbjct:   156 LLSYLLLKQTTSFYALLTCGIIIGGFWLGVDQEGAEGTLSWLGTVFGVLASLCVSLNAIY 215

Query:   185 TKEVLPYVNDKIWLVSYYNNVYAVALFIPIIFICGEVSELANYPHLFSFYFWILLTIGGV 244
             T +VLP V+  IW +++YNNV A  LF+P++ + GE+  L ++  L S +FW ++T+GG+
Sbjct:   216 TTKVLPAVDGSIWRLTFYNNVNACILFLPLLLLLGELQALRDFAQLGSAHFWGMMTLGGL 275

Query:   245 FGLTIGYVTSLQIQVTSPLTHNISGTAKASFHTVLATYWYSEFKPLLWWISNGIILSGSA 304
             FG  IGYVT LQI+ TSPLTHN+SGTAKA   TVLA  +Y E K  LWW SN ++L GS+
Sbjct:   276 FGFAIGYVTGLQIKFTSPLTHNVSGTAKACAQTVLAVLYYEETKSFLWWTSNMMVLGGSS 335

Query:   305 TYALVKKKELDRRKDMEE 322
              Y  V+  E+  +K  EE
Sbjct:   336 AYTWVRGWEM--KKTPEE 351

GO:0008643 "carbohydrate transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0030259 "lipid glycosylation" evidence=IEA

GO:0000139 "Golgi membrane" evidence=TAS

GO:0055085 "transmembrane transport" evidence=TAS

UNIPROTKB|E1BV92 SLC35C1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 766 (274.7 bits), Expect = 5.0e-76, P = 5.0e-76
 Identities = 161/320 (50%), Positives = 216/320 (67%)

Query:     5 ISRYANIIFVVALYWCVSITTIFLNKTLLSE--LQLDAPIFVTWYQCLVSAIICFVLCQL 62
             + R   I  VV+LYW VSIT +FLNK LL    L+LDAP+FVT++QC V+A +C  L  L
Sbjct:    37 VLRALRIALVVSLYWFVSITMVFLNKYLLDSPSLRLDAPLFVTFFQCAVTAALCLGL-SL 95

Query:    63 SQQYPKNFSFPYGNPFDTNNMRNLVPLTSCFILMLSFNNLCLKNVGVAFYYVSRSLTTVF 122
                     + P     D    R+++PL+  FI M++ NNLCLK+VGVAFY V RSLTTVF
Sbjct:    96 GAACGPCAALP-ALRLDLKVSRSVLPLSVVFIGMVTSNNLCLKHVGVAFYNVGRSLTTVF 154

Query:   123 NVILTYILLQEKTSHLAILSCFIIFSGFALGVNQEGVAGSFSTLGTIYGVISSFAQALFS 182
             NV+L+Y+LL++ TS  A+L+C II  GF LGV+QEG  G+ S  G I+G+++S   +L +
Sbjct:   155 NVLLSYLLLKQTTSLYALLACGIIIGGFWLGVDQEGAEGTLSWTGIIFGILASLCVSLNA 214

Query:   183 IHTKEVLPYVNDKIWLVSYYNNVYAVALFIPIIFICGEVSELANYPHLFSFYFWILLTIG 242
             I+TK+VLP V+  IW +++YNN+ A  LF+P++ I GE   L ++  L S  FW ++T+G
Sbjct:   215 IYTKKVLPVVDGSIWHLTFYNNMNACVLFLPLMMITGEFHTLYHFDKLGSPSFWGMMTLG 274

Query:   243 GVFGLTIGYVTSLQIQVTSPLTHNISGTAKASFHTVLATYWYSEFKPLLWWISNGIILSG 302
             GVFG  IGYVT LQI+ TSPLTHN+SGTAKA   TVLA  ++ E K LLWW SN ++L G
Sbjct:   275 GVFGFAIGYVTGLQIKFTSPLTHNVSGTAKACAQTVLAVVYFEETKSLLWWTSNLMVLGG 334

Query:   303 SATYALVKKKELDRRKDMEE 322
             S  Y  VK  E+  RK  E+
Sbjct:   335 SFAYTWVKGLEM--RKAQED 352

GO:0016021 "integral to membrane" evidence=IEA

GO:0030259 "lipid glycosylation" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q968A5	FUCT1_CAEEL	No assigned EC number	0.5258	0.9506	0.8484	yes	N/A
Q550W6	FUCT1_DICDI	No assigned EC number	0.3897	0.9413	0.8288	yes	N/A
Q8BLX4	FUCT1_MOUSE	No assigned EC number	0.5079	0.9629	0.8595	yes	N/A
Q96A29	FUCT1_HUMAN	No assigned EC number	0.5094	0.9660	0.8598	yes	N/A
A6QM03	FUCT1_BOVIN	No assigned EC number	0.5015	0.9629	0.8571	yes	N/A
Q9VHT4	FUCT1_DROME	No assigned EC number	0.5093	0.9814	0.9436	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	324
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	100.0
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	100.0
KOG1442|consensus	347		100.0
KOG1444|consensus	314		100.0
KOG1441|consensus	316		100.0
PLN00411	358	nodulin MtN21 family protein; Provisional	99.97
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	99.97
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	99.96
PRK11689	295	aromatic amino acid exporter; Provisional	99.96
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	99.96
PRK11272	292	putative DMT superfamily transporter inner membran	99.96
PRK10532	293	threonine and homoserine efflux system; Provisiona	99.96
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	99.95
PRK15430	296	putative chloramphenical resistance permease RarD;	99.95
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	99.95
KOG1443|consensus	349		99.94
KOG1580|consensus	337		99.9
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.89
KOG1581|consensus	327		99.89
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	99.87
COG0697	292	RhaT Permeases of the drug/metabolite transporter	99.87
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	99.86
KOG2765|consensus	416		99.81
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	99.81
KOG2234|consensus	345		99.81
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	99.8
KOG1583|consensus	330		99.8
COG2962	293	RarD Predicted permeases [General function predict	99.79
KOG4510|consensus	346		99.78
KOG1582|consensus	367		99.78
KOG3912|consensus	372		99.73
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	99.71
KOG2766|consensus	336		99.49
COG2510	140	Predicted membrane protein [Function unknown]	99.33
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	99.32
COG2510	140	Predicted membrane protein [Function unknown]	99.26
KOG4314|consensus	290		99.12
PF13536	113	EmrE: Multidrug resistance efflux transporter	99.09
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	99.09
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	98.99
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	98.9
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	98.8
PRK15430	296	putative chloramphenical resistance permease RarD;	98.77
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	98.76
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	98.75
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	98.74
PLN00411	358	nodulin MtN21 family protein; Provisional	98.58
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.34
PRK11272	292	putative DMT superfamily transporter inner membran	98.29
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.28
PRK10532	293	threonine and homoserine efflux system; Provisiona	98.27
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	98.23
COG2962	293	RarD Predicted permeases [General function predict	98.2
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	98.16
PRK11689	295	aromatic amino acid exporter; Provisional	98.11
PF13536	113	EmrE: Multidrug resistance efflux transporter	98.1
KOG2922|consensus	335		98.04
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	98.03
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	97.96
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	97.94
PRK13499	345	rhamnose-proton symporter; Provisional	97.92
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	97.74
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	97.72
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	97.71
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	97.7
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	97.63
COG0697	292	RhaT Permeases of the drug/metabolite transporter	97.59
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.48
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	97.41
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.35
PRK09541	110	emrE multidrug efflux protein; Reviewed	97.31
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	97.26
KOG4510|consensus	346		97.24
PRK11431	105	multidrug efflux system protein; Provisional	97.19
PRK10650	109	multidrug efflux system protein MdtI; Provisional	97.14
PRK09541	110	emrE multidrug efflux protein; Reviewed	96.99
COG2076	106	EmrE Membrane transporters of cations and cationic	96.96
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	96.95
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	96.75
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	96.55
COG2076	106	EmrE Membrane transporters of cations and cationic	96.55
PRK13499	345	rhamnose-proton symporter; Provisional	96.48
PRK11431	105	multidrug efflux system protein; Provisional	96.37
KOG2234|consensus	345		96.25
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	96.21
PRK10650	109	multidrug efflux system protein MdtI; Provisional	96.2
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	96.1
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	96.0
KOG2765|consensus	416		95.62
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	95.49
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	94.79
KOG1441|consensus	316		94.61
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	94.01
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	93.9
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	93.66
KOG1581|consensus	327		93.5
KOG2922|consensus	335		93.05
PF07857	254	DUF1632: CEO family (DUF1632); InterPro: IPR012435	91.97
KOG4314|consensus	290		91.79
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	91.56
KOG1580|consensus	337		90.94
PF06379	344	RhaT: L-rhamnose-proton symport protein (RhaT); In	90.74
KOG1444|consensus	314		90.6
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	89.58

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=100.00  E-value=6e-37  Score=272.14  Aligned_cols=293  Identities=19%  Similarity=0.251  Sum_probs=236.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhhCCCCCcCCCCCCCChhhhhHHHHH
Q psy1072          10 NIIFVVALYWCVSITTIFLNKTLLSELQLDAPIFVTWYQCLVSAIICFVLCQLSQQYPKNFSFPYGNPFDTNNMRNLVPL   89 (324)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~K~~l~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (324)
                      .....+..|++.|+..+++||+++++  +++|.++++.|+..+.+.+.+.+..+.+     +.+   +.++++++.+.+.
T Consensus         2 ~~~~~~~~w~~~~~~~~~~NK~~l~~--~~~P~~~~~~~~~~~~~~~~~~~~~~~~-----~~~---~~~~~~~~~~~~~   71 (302)
T TIGR00817         2 QTGLLFGLWYFLNVYFNIYNKKLLNV--FPYPYFKTLISLAVGSLYCLLSWSSGLP-----KRL---KISSALLKLLLPV   71 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhh--CChhHHHHHHHHHHHHHHHHHHHHhCCC-----CCC---CCCHHHHHHHHHH
Confidence            45678899999999999999999986  7799999999999998877665322111     112   3678899999999


Q ss_pred             HHHHHHHHHHhhhhccccchhHHHHHHHHHHHHHHHHHHHHhccccchhhHHHHHHHhhhceeeeeccCCCccchhhHHH
Q psy1072          90 TSCFILMLSFNNLCLKNVGVAFYYVSRSLTTVFNVILTYILLQEKTSHLAILSCFIIFSGFALGVNQEGVAGSFSTLGTI  169 (324)
Q Consensus        90 ~~~~~~~~~~~~~al~~~~~~~~~~l~~~~p~~~~~~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~G~~  169 (324)
                      |+++.....++|.|++|++++.++++++++|+++++++++++|||++++++.+++++++|+++....   +.+.+..|++
T Consensus        72 g~~~~~~~~~~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~---~~~~~~~G~~  148 (302)
T TIGR00817        72 AIVHTIGHVTSNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALASDT---ELSFNWAGFL  148 (302)
T ss_pred             HHHHHHHHHHHHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhcCC---cccccHHHHH
Confidence            9999999999999999999999999999999999999999999999999999999999999876533   2355678999


Q ss_pred             HHHHHHHHHHHHHHHHHhhccCCCCceeeehhhhhhHHHHHHHHHHhhcccccccc-cCCC----cchhHHHHHHHHHHH
Q psy1072         170 YGVISSFAQALFSIHTKEVLPYVNDKIWLVSYYNNVYAVALFIPIIFICGEVSELA-NYPH----LFSFYFWILLTIGGV  244 (324)
Q Consensus       170 ~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~----~~~~~~~~~~~~~~~  244 (324)
                      +++++++++|++.++.||..++.+.++.+...|++..+++.+.|.....++.+... +...    ......+......+.
T Consensus       149 ~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (302)
T TIGR00817       149 SAMISNITFVSRNIFSKKAMTIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLVAAM  228 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHhhccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHHHHHHH
Confidence            99999999999999999987755677889999999999999999887654322111 0000    011112222333333


Q ss_pred             -HHHHHHHHHHHHHhccCchhhhhhccchHHHHHHHHHHHhCCCcchhhHhHHHHHhhhhhheehhcccccc
Q psy1072         245 -FGLTIGYVTSLQIQVTSPLTHNISGTAKASFHTVLATYWYSEFKPLLWWISNGIILSGSATYALVKKKELD  315 (324)
Q Consensus       245 -~~~~~~~~~~~~~~~~~a~~~si~~~~~~v~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~~~~~~~~~  315 (324)
                       .....+...+..+++.+|+++++..+++|+.++++|++++||++|+.+++|.++++.|+.+|++.|+++++
T Consensus       229 ~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~~k~~~~~  300 (302)
T TIGR00817       229 GFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSRVKAQKPK  300 (302)
T ss_pred             HHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHHHhccCcC
Confidence             22233345556799999999999999999999999999999999999999999999999999987654443

specificities overlap.

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=100.00  E-value=7.4e-35  Score=262.44  Aligned_cols=292  Identities=17%  Similarity=0.207  Sum_probs=240.1

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhhCCCCCcCCCCCCCChhhhhHH
Q psy1072           7 RYANIIFVVALYWCVSITTIFLNKTLLSELQLDAPIFVTWYQCLVSAIICFVLCQLSQQYPKNFSFPYGNPFDTNNMRNL   86 (324)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~K~~l~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (324)
                      .++.+...+.+|+..|+..+..||+++++  +|.|.+++++|++++.+++.+++..+.+     +.|+ .+..+++++..
T Consensus        46 ~~~~~~~~~~~wy~~s~~~~~~nK~vl~~--~~~P~~l~~~~~~~~~l~~~~~~~~~~~-----~~~~-~~~~~~~~~~l  117 (350)
T PTZ00343         46 FKWKLALLFLTWYALNVLYVVDNKLALNM--LPLPWTISSLQLFVGWLFALLYWATGFR-----KIPR-IKSLKLFLKNF  117 (350)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHHHHh--CChhHHHHHHHHHHHHHHHHHHHHhCCC-----CCCC-CCCHHHHHHHH
Confidence            47888999999999999999999999987  6669999999999998877666543321     2232 11134588999


Q ss_pred             HHHHHHHHHHHHHhhhhccccchhHHHHHHHHHHHHHHHHHHHHhccccchhhHHHHHHHhhhceeeeeccCCCccchhh
Q psy1072          87 VPLTSCFILMLSFNNLCLKNVGVAFYYVSRSLTTVFNVILTYILLQEKTSHLAILSCFIIFSGFALGVNQEGVAGSFSTL  166 (324)
Q Consensus        87 ~~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~p~~~~~~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~  166 (324)
                      ++.|+++.......+.|+++++++.++++++++|+++++++++++|||++++++.++++++.|+++...+   +.+.++.
T Consensus       118 lp~gl~~~~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~---~~~~~~~  194 (350)
T PTZ00343        118 LPQGLCHLFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVK---ELHFTWL  194 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheecc---cchhHHH
Confidence            9999998877777889999999999999999999999999999999999999999999999999998753   3456788


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhccCCC-----CceeeehhhhhhHHHHHHHHHHhhcccccc---cc-c----CCCcchh
Q psy1072         167 GTIYGVISSFAQALFSIHTKEVLPYVN-----DKIWLVSYYNNVYAVALFIPIIFICGEVSE---LA-N----YPHLFSF  233 (324)
Q Consensus       167 G~~~~l~s~~~~a~~~v~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~-~----~~~~~~~  233 (324)
                      |++++++|++++|++.++.|+.+++.+     .++.+...++.+.++++++|..... |...   .+ +    .......
T Consensus       195 G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~-e~~~~~~~~~~~~~~~~~~~~~  273 (350)
T PTZ00343        195 AFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFF-EGKKWVPVWTNYTANMTNYTKG  273 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHH-hhHHHHHHHHHhhhcccccchH
Confidence            999999999999999999999987653     3344455566888999999988765 3221   11 0    0111112


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhccCchhhhhhccchHHHHHHHHHHHhCCCcchhhHhHHHHHhhhhhheehhc
Q psy1072         234 YFWILLTIGGVFGLTIGYVTSLQIQVTSPLTHNISGTAKASFHTVLATYWYSEFKPLLWWISNGIILSGSATYALVK  310 (324)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~si~~~~~~v~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~~~~  310 (324)
                      ..+..++..++..+..+...+.++++++|.++++.+++||++++++|++++||++|+.+++|.++++.|+++|++.|
T Consensus       274 ~~l~~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lYs~~k  350 (350)
T PTZ00343        274 IIIFKIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYSLFK  350 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHHhhcC
Confidence            33445666777888888888889999999999999999999999999999999999999999999999999998753

>KOG1442|consensus

Probab=100.00  E-value=5e-38  Score=257.88  Aligned_cols=315  Identities=54%  Similarity=0.938  Sum_probs=295.0

Q ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHHHHHhc--CCCCchHHHHHHHHHHHHHHHHHHHHHhhhCCCCCcCCCCCCCChhh
Q psy1072           5 ISRYANIIFVVALYWCVSITTIFLNKTLLSE--LQLDAPIFVTWYQCLVSAIICFVLCQLSQQYPKNFSFPYGNPFDTNN   82 (324)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~K~~l~~--~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (324)
                      .+++-.+..+...++++++...+.||++++.  ...+.|.+.++.|++.+..++..+....+++|..+++|+ .+.+.+.
T Consensus        23 ~~n~~~v~~~vs~ywv~SI~~vf~nk~llss~~~~Ld~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~-~~ldl~t  101 (347)
T KOG1442|consen   23 EANAKQVDSAVSLYWVTSIGLVFLNKHLLSSLVVILDAPLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPS-LQLDLAT  101 (347)
T ss_pred             HHhhhchhhhccceeeeeehhhhhHHHHhhchhhhcCcHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCc-ccccHHH
Confidence            4455666788899999999999999999987  467899999999999999999999988888888888887 6788889


Q ss_pred             hhHHHHHHHHHHHHHHHhhhhccccchhHHHHHHHHHHHHHHHHHHHHhccccchhhHHHHHHHhhhceeeeeccCCCcc
Q psy1072          83 MRNLVPLTSCFILMLSFNNLCLKNVGVAFYYVSRSLTTVFNVILTYILLQEKTSHLAILSCFIIFSGFALGVNQEGVAGS  162 (324)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~p~~~~~~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~  162 (324)
                      .++.+|+++.+.+++.++|.+++|++++++.+-|++..+|+.+++++++|+|-+.....++.+++.|.-+.++.|+.++.
T Consensus       102 ~r~vlplsvVfi~mI~fnnlcL~yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~~~~~C~lIi~GF~lGvdqE~~~~~  181 (347)
T KOG1442|consen  102 ARQVLPLSVVFILMISFNNLCLKYVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFFALGCCLLIILGFGLGVDQEGSTGT  181 (347)
T ss_pred             HHhhcchhheeeeehhccceehhhcceEEEEeccchhhhHHHHhHHhhcccccccccceeehhheehheeccccccccCc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999988877778


Q ss_pred             chhhHHHHHHHHHHHHHHHHHHHHhhccCCCCceeeehhhhhhHHHHHHHHHHhhcccccccccCCCcchhHHHHHHHHH
Q psy1072         163 FSTLGTIYGVISSFAQALFSIHTKEVLPYVNDKIWLVSYYNNVYAVALFIPIIFICGEVSELANYPHLFSFYFWILLTIG  242 (324)
Q Consensus       163 ~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~  242 (324)
                      .++.|.++++.|+++-|+..++.||...+.+..-|.+++|+++.+.++++|...+.||......+++..+..+|.++..+
T Consensus       182 ls~~GvifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mtLs  261 (347)
T KOG1442|consen  182 LSWIGVIFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMTLS  261 (347)
T ss_pred             cchhhhHHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHHHH
Confidence            89999999999999999999999999888888899999999999999999999999999999999988899999999999


Q ss_pred             HHHHHHHHHHHHHHHhccCchhhhhhccchHHHHHHHHHHHhCCCcchhhHhHHHHHhhhhhheehhcccccchhhhh
Q psy1072         243 GVFGLTIGYVTSLQIQVTSPLTHNISGTAKASFHTVLATYWYSEFKPLLWWISNGIILSGSATYALVKKKELDRRKDM  320 (324)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~a~~~si~~~~~~v~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~~~~~~~~~~~~~~  320 (324)
                      |++++.++|.+.+-+|.+||.+.++.+..|...+.+++..+++|..+...|-|-++++.|...|.+.|+.|.+++.++
T Consensus       262 glfgF~mgyvTg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~vk~~em~~~~~~  339 (347)
T KOG1442|consen  262 GLFGFAMGYVTGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTLVKEHEMRKASAQ  339 (347)
T ss_pred             HHHHHHhhheeeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHHHHHHHHHhhccC
Confidence            999999999999999999999999999999999999999999999999999999999999999999988887765443

>KOG1444|consensus

Probab=100.00  E-value=1.2e-32  Score=233.30  Aligned_cols=302  Identities=20%  Similarity=0.307  Sum_probs=266.1

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhhCCCCCcCCCCCCCChhhhhH
Q psy1072           6 SRYANIIFVVALYWCVSITTIFLNKTLLSELQLDAPIFVTWYQCLVSAIICFVLCQLSQQYPKNFSFPYGNPFDTNNMRN   85 (324)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~K~~l~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (324)
                      ++.......++.|+.+|+.+++.||+++++++||..+++...|.+.+.+.+....+.+-     .+.|   +++++..|+
T Consensus         8 ~~~~~~l~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~~l-----v~~~---~l~~~~~kk   79 (314)
T KOG1444|consen    8 KKQSSPLLSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRLGL-----VNFR---PLDLRTAKK   79 (314)
T ss_pred             hhhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHhce-----eecC---CcChHHHHH
Confidence            33455678999999999999999999999999877777778999999888877655532     2445   589999999


Q ss_pred             HHHHHHHHHHHHHHhhhhccccchhHHHHHHHHHHHHHHHHHHHHhccccchhhHHHHHHHhhhceeeeeccCCCccchh
Q psy1072          86 LVPLTSCFILMLSFNNLCLKNVGVAFYYVSRSLTTVFNVILTYILLQEKTSHLAILSCFIIFSGFALGVNQEGVAGSFST  165 (324)
Q Consensus        86 ~~~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~p~~~~~~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~  165 (324)
                      +.|.++.+.++.+.+..+++|.++++++++|+.+|+++++.+..++|.|+++..|.++..+.+|......++   .+++.
T Consensus        80 ~~P~~~lf~~~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~d---~sf~~  156 (314)
T KOG1444|consen   80 WFPVSLLFVGMLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFTD---LSFNL  156 (314)
T ss_pred             HccHHHHHHHHHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhcccc---ceecc
Confidence            999999999999999999999999999999999999999999999999999999999999999998766443   46666


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhhccCCCCceeeehhhhhhHHHHHHHHHHhhccccccc-ccCCCcchhHHHHHHHHHHH
Q psy1072         166 LGTIYGVISSFAQALFSIHTKEVLPYVNDKIWLVSYYNNVYAVALFIPIIFICGEVSEL-ANYPHLFSFYFWILLTIGGV  244 (324)
Q Consensus       166 ~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~  244 (324)
                      .|+.|++.+.++.+.+.++.||..+..+.+.+++++|+++.+.+.+.....++||.+.. .+.+.+.++.++..+.++|+
T Consensus       157 ~gY~w~~~n~~~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~~~~~~~~~~~~lScv  236 (314)
T KOG1444|consen  157 RGYSWALANCLTTAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELDALSLNFDNWSDSSVLVVMLLSCV  236 (314)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchHHHHhhcccccchhHHHHHHHHHH
Confidence            79999999999999999999999998888999999999999999999999999987722 23344667888999999999


Q ss_pred             HHHHHHHHHHHHHhccCchhhhhhccchHHHHHHHHHHHhCCCcchhhHhHHHHHhhhhhheehhcccccchhh
Q psy1072         245 FGLTIGYVTSLQIQVTSPLTHNISGTAKASFHTVLATYWYSEFKPLLWWISNGIILSGSATYALVKKKELDRRK  318 (324)
Q Consensus       245 ~~~~~~~~~~~~~~~~~a~~~si~~~~~~v~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~~~~~~~~~~~~  318 (324)
                      ++++.+|..++|.+..|+++.++++..+.....+.+.+++|++.++...+|..+.+.|..+|++.+.++++.++
T Consensus       237 ~gf~isy~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~~~~~~~k~~~~  310 (314)
T KOG1444|consen  237 MGFGISYTSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYSYATFRKKKQPP  310 (314)
T ss_pred             HHHHHHHHHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHhhhhhhhccCCC
Confidence            99999999999999999999999997777777777777778899999999999999999999998877666544

>KOG1441|consensus

Probab=100.00  E-value=2.2e-34  Score=249.66  Aligned_cols=300  Identities=25%  Similarity=0.324  Sum_probs=258.5

Q ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhhCCCCCcCCCCCCCChhhhh
Q psy1072           5 ISRYANIIFVVALYWCVSITTIFLNKTLLSELQLDAPIFVTWYQCLVSAIICFVLCQLSQQYPKNFSFPYGNPFDTNNMR   84 (324)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~K~~l~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (324)
                      .++.+........|+++++..+..||++++.++|+.|.+++..|..++.+.+......+...+.  +     ..++..++
T Consensus        12 ~~~~~~~~~~~~~w~~~~v~~~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~~--~-----~~~~~~~~   84 (316)
T KOG1441|consen   12 LKKILRIGIAFAIWYVLSVGVIILNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLKLVPPS--K-----ISSKLPLR   84 (316)
T ss_pred             cchhHHHHHHHHHHhhhheeeEEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCC--c-----cccccchH
Confidence            4556778889999999999999999999998889999999999999998888887766542211  1     12446799


Q ss_pred             HHHHHHHHHHHHHHHhhhhccccchhHHHHHHHHHHHHHHHHHHHHhccccchhhHHHHHHHhhhceeeeeccCCCccch
Q psy1072          85 NLVPLTSCFILMLSFNNLCLKNVGVAFYYVSRSLTTVFNVILTYILLQEKTSHLAILSCFIIFSGFALGVNQEGVAGSFS  164 (324)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~p~~~~~~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~  164 (324)
                      ..+++|+..+++.+++|.|++|+|+++++.+++++|+++.++++++.+|+.++..+.++...+.|+++....   |.++|
T Consensus        85 ~llpl~~~~~~~~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias~~---e~~fn  161 (316)
T KOG1441|consen   85 TLLPLGLVFCISHVLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIASVT---ELSFN  161 (316)
T ss_pred             HHHHHHHHHHHHHHhcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEeeec---ccccc
Confidence            999999999999999999999999999999999999999999999999999999999999999999998874   45799


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHhhcc--CCCCceeeehhhhhhHHHHHHH-HHHhhccccccc-ccCCCcchhHHHHHHH
Q psy1072         165 TLGTIYGVISSFAQALFSIHTKEVLP--YVNDKIWLVSYYNNVYAVALFI-PIIFICGEVSEL-ANYPHLFSFYFWILLT  240 (324)
Q Consensus       165 ~~G~~~~l~s~~~~a~~~v~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~-~~~~~~~~~~~~~~~~  240 (324)
                      +.|++.++++.+..+.++++.|+.++  +++.++.++.+|+.+.+...++ |..... |.... .......+..++.++.
T Consensus       162 ~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~-~~~~~~~~~~~~~~~~~~~~~~  240 (316)
T KOG1441|consen  162 LFGFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYV-EGNKFVGFLTAPWFVTFLILLL  240 (316)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhh-cccceeeeeccccchhhHHHHH
Confidence            99999999999999999999999994  5677899999999999999999 876654 33222 0011122333454444


Q ss_pred             HHHHHHHHHHHHHHHHHhccCchhhhhhccchHHHHHHHHHHHhCCCcchhhHhHHHHHhhhhhheehhcccccch
Q psy1072         241 IGGVFGLTIGYVTSLQIQVTSPLTHNISGTAKASFHTVLATYWYSEFKPLLWWISNGIILSGSATYALVKKKELDR  316 (324)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~a~~~si~~~~~~v~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~~~~~~~~~~  316 (324)
                      .. ++++..|...|.++++++|++.++.+.+|.+..++.|+++|+++.|+.+..|+++.+.|+.+|++.|.+++++
T Consensus       241 ~s-v~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~~k~~~~~~  315 (316)
T KOG1441|consen  241 NS-VLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSRAKLKEKKG  315 (316)
T ss_pred             HH-HHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHHHhhhhhcc
Confidence            44 9999999999999999999999999999999999999999999999999999999999999999988876654

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=99.97  E-value=1e-29  Score=228.21  Aligned_cols=299  Identities=13%  Similarity=0.102  Sum_probs=219.1

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhhCCCCCcCCCCCCCChhhhhHHH
Q psy1072           8 YANIIFVVALYWCVSITTIFLNKTLLSELQLDAPIFVTWYQCLVSAIICFVLCQLSQQYPKNFSFPYGNPFDTNNMRNLV   87 (324)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~K~~l~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (324)
                      .....++.++--+.......+.|..++. |. +|..+.++|+.++++++.++.+.+++.+   +.|   +.+++++..+.
T Consensus        11 ~~~~~~~~~~~q~~~~~~~~~~k~a~~~-G~-~~~~~~~~R~~iA~l~Ll~~~~~~~~~~---~~~---~~~~~~~~~l~   82 (358)
T PLN00411         11 EAVFLTAMLATETSVVGISTLFKVATSK-GL-NIYPFLGYSYLLASLLLLPSLFFTNRSR---SLP---PLSVSILSKIG   82 (358)
T ss_pred             ccchHHHHHHHHHHHHHHHHHHHHHHHC-CC-CccHHHHHHHHHHHHHHHHHHHHHHHhc---ccC---cchHHHHHHHH
Confidence            3444556666666667777788999976 67 5888999999999999988776543211   222   23566677777


Q ss_pred             HHHHHHHHHHHHhhhhccccchhHHHHHHHHHHHHHHHHHHHH------hccccchhhHHHHHHHhhhceeeeeccCC--
Q psy1072          88 PLTSCFILMLSFNNLCLKNVGVAFYYVSRSLTTVFNVILTYIL------LQEKTSHLAILSCFIIFSGFALGVNQEGV--  159 (324)
Q Consensus        88 ~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~p~~~~~~~~~~------~~e~~~~~~~~~~~l~~~Gv~l~~~~~~~--  159 (324)
                      ..+++......+.+.+++|++++.++++.++.|++++++++++      +|||++++++.+++++++|+++....++.  
T Consensus        83 l~g~~g~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~  162 (358)
T PLN00411         83 LLGFLGSMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRV  162 (358)
T ss_pred             HHHHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCccc
Confidence            7777765566688999999999999999999999999999999      69999999999999999999875421110  


Q ss_pred             -------------------Cccch-hhHHHHHHHHHHHHHHHHHHHHhhccCCCCceeeehhhhhhHHHHHHHHHHhhcc
Q psy1072         160 -------------------AGSFS-TLGTIYGVISSFAQALFSIHTKEVLPYVNDKIWLVSYYNNVYAVALFIPIIFICG  219 (324)
Q Consensus       160 -------------------~~~~~-~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  219 (324)
                                         +...+ ..|+.++++++++||+|.+++|+..++++. ....+.++...+.+...+..... 
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~~-~~~~t~~~~~~~~~~~~~~~l~~-  240 (358)
T PLN00411        163 FVASSPPYLNFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEYPA-AFTVSFLYTVCVSIVTSMIGLVV-  240 (358)
T ss_pred             ccccccccccccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCc-HhHHHHHHHHHHHHHHHHHHHHH-
Confidence                               01122 459999999999999999999998765432 23445555555555554444443 


Q ss_pred             cccccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhccCchhhhhhccchHHHHHHHHHHHhCCCcchhhHhHHHHH
Q psy1072         220 EVSELANYPHLFSFYFWILLTIGGVFGLTIGYVTSLQIQVTSPLTHNISGTAKASFHTVLATYWYSEFKPLLWWISNGII  299 (324)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~si~~~~~~v~~~~~~~~~~~e~~~~~~~~G~~li  299 (324)
                      |..+........+...+ .+++.++.+.+.....++++++.+|.+++++.+++|+++.++|++++||++++.+++|++++
T Consensus       241 ~~~~~~~~~~~~~~~~~-~i~y~~i~t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LI  319 (358)
T PLN00411        241 EKNNPSVWIIHFDITLI-TIVTMAIITSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILI  319 (358)
T ss_pred             ccCCcccceeccchHHH-HHHHHHHHHHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHH
Confidence            22111111111222322 34555555443333344779999999999999999999999999999999999999999999


Q ss_pred             hhhhhheehhcccccchh
Q psy1072         300 LSGSATYALVKKKELDRR  317 (324)
Q Consensus       300 ~~g~~~~~~~~~~~~~~~  317 (324)
                      +.|+++.++.+++|.+++
T Consensus       320 l~Gv~l~~~~~~~~~~~~  337 (358)
T PLN00411        320 TLGFYAVMWGKANEEKDQ  337 (358)
T ss_pred             HHHHHHHHhhhhhhhhhc
Confidence            999999988777765544

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=99.97  E-value=1e-29  Score=225.44  Aligned_cols=290  Identities=20%  Similarity=0.291  Sum_probs=241.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhhCCCCCcCCCCCCCChhhhhHHHHHHHHH
Q psy1072          14 VVALYWCVSITTIFLNKTLLSELQLDAPIFVTWYQCLVSAIICFVLCQLSQQYPKNFSFPYGNPFDTNNMRNLVPLTSCF   93 (324)
Q Consensus        14 ~~~~~~~~~~~~~~~~K~~l~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (324)
                      +...|.++.....+.+|.....++.+.|.++++.|++...+...+.....+. +         +.++..++++.+.++++
T Consensus         5 ~~~i~~~~~~~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~-~---------~~~~~~~~~~~~~~~~~   74 (303)
T PF08449_consen    5 VAGIFGGCCSYGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFKF-P---------KSRKIPLKKYAILSFLF   74 (303)
T ss_pred             HHHHHHHHHHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhccc-c---------CCCcChHHHHHHHHHHH
Confidence            3445555544445566655555444479999999999999888876655431 1         12445588999999999


Q ss_pred             HHHHHHhhhhccccchhHHHHHHHHHHHHHHHHHHHHhccccchhhHHHHHHHhhhceeeeeccCC----Ccc---chhh
Q psy1072          94 ILMLSFNNLCLKNVGVAFYYVSRSLTTVFNVILTYILLQEKTSHLAILSCFIIFSGFALGVNQEGV----AGS---FSTL  166 (324)
Q Consensus        94 ~~~~~~~~~al~~~~~~~~~~l~~~~p~~~~~~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~~----~~~---~~~~  166 (324)
                      .++..++|.|++|+|.++.+++|++.|+++++++++++|||++++++.++++..+|+++...++..    +.+   ....
T Consensus        75 ~~~~~~~~~al~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~~~~~~~~~~  154 (303)
T PF08449_consen   75 FLASVLSNAALKYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSSNSSSFSSAL  154 (303)
T ss_pred             HHHHHHHHHHHHhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccccccccccccccchh
Confidence            999999999999999999999999999999999999999999999999999999999997644421    111   1123


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhccCCCCceeeehhhhhhHHHHHHHHHHhh--cccccccccCCCcchhHHHHHHHHHHH
Q psy1072         167 GTIYGVISSFAQALFSIHTKEVLPYVNDKIWLVSYYNNVYAVALFIPIIFI--CGEVSELANYPHLFSFYFWILLTIGGV  244 (324)
Q Consensus       167 G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~  244 (324)
                      |+++.+++.++.|...+++||..++++.+++++++|++.++.+...+....  .+|..+..++. ..++..+..+...++
T Consensus       155 G~~ll~~sl~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~-~~~p~~~~~l~~~s~  233 (303)
T PF08449_consen  155 GIILLLLSLLLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFI-SAHPSVLLYLLLFSL  233 (303)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHH-HHhHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999988888  66766554432 244556777888888


Q ss_pred             HHHHHHHHHHHHHhccCchhhhhhccchHHHHHHHHHHHhCCCcchhhHhHHHHHhhhhhheehhccccc
Q psy1072         245 FGLTIGYVTSLQIQVTSPLTHNISGTAKASFHTVLATYWYSEFKPLLWWISNGIILSGSATYALVKKKEL  314 (324)
Q Consensus       245 ~~~~~~~~~~~~~~~~~a~~~si~~~~~~v~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~~~~~~~~  314 (324)
                      .+...+...+.++++.+|++.++...+|+..++++|++++|+++++.+|+|+++++.|..+|++.|+|++
T Consensus       234 ~~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~~k~~  303 (303)
T PF08449_consen  234 TGALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAKKKKN  303 (303)
T ss_pred             HHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhhccCC
Confidence            8888888888889999999999999999999999999999999999999999999999999999877653

; GO: 0055085 transmembrane transport

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=99.96  E-value=4.2e-27  Score=208.53  Aligned_cols=281  Identities=10%  Similarity=0.096  Sum_probs=203.5

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhhCCCCCcCCCCCCCChhhhhHHH
Q psy1072           8 YANIIFVVALYWCVSITTIFLNKTLLSELQLDAPIFVTWYQCLVSAIICFVLCQLSQQYPKNFSFPYGNPFDTNNMRNLV   87 (324)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~K~~l~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (324)
                      ......+..+|+.....    .|..+++  + +|..+.++|+.++.+.+.++..  +  +   +.         +++...
T Consensus         6 ~l~~l~~~~~Wg~~~~~----~k~~~~~--~-~p~~~~~~R~~~a~~~l~~~~~--~--~---~~---------~~~~~~   62 (299)
T PRK11453          6 GVLALLVVVVWGLNFVV----IKVGLHN--M-PPLMLAGLRFMLVAFPAIFFVA--R--P---KV---------PLNLLL   62 (299)
T ss_pred             HHHHHHHHHHHhhhHHH----HHHHHhc--C-CHHHHHHHHHHHHHHHHHHHhc--C--C---CC---------chHHHH
Confidence            34566777888776664    4888876  4 6999999999987766554331  1  1   11         133444


Q ss_pred             HHHHHH-HHHHHHhhhhccc-cchhHHHHHHHHHHHHHHHHHHHHhccccchhhHHHHHHHhhhceeeeeccCCCccchh
Q psy1072          88 PLTSCF-ILMLSFNNLCLKN-VGVAFYYVSRSLTTVFNVILTYILLQEKTSHLAILSCFIIFSGFALGVNQEGVAGSFST  165 (324)
Q Consensus        88 ~~~~~~-~~~~~~~~~al~~-~~~~~~~~l~~~~p~~~~~~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~  165 (324)
                      ..+++. .....+.+.+++| .+++.++++.++.|+++.+++++++|||++++++.+++++++|+.+...++.++.+.+.
T Consensus        63 ~~g~~~~~~~~~~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~~~~~~~~~~  142 (299)
T PRK11453         63 GYGLTISFGQFAFLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIEDSLNGQHVAM  142 (299)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhccccCCCcchhH
Confidence            445543 3444566778888 68899999999999999999999999999999999999999999887654322334456


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhhccCCCC-ceeeehhhhhhHHHHHHHHHHhhcccccccccCCCcchhHHHHHHHHHHH
Q psy1072         166 LGTIYGVISSFAQALFSIHTKEVLPYVND-KIWLVSYYNNVYAVALFIPIIFICGEVSELANYPHLFSFYFWILLTIGGV  244 (324)
Q Consensus       166 ~G~~~~l~s~~~~a~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  244 (324)
                      .|+.+++.+++++|.+.++.||..++.+. .......++...+.+.+.+.....++...........++..|..+++.++
T Consensus       143 ~G~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~i  222 (299)
T PRK11453        143 LGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYLAF  222 (299)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHHHH
Confidence            79999999999999999999997553221 11222333333333333333222211111100001234566888899999


Q ss_pred             HHHHHHHHHH-HHHhccCchhhhhhccchHHHHHHHHHHHhCCCcchhhHhHHHHHhhhhhheehhcc
Q psy1072         245 FGLTIGYVTS-LQIQVTSPLTHNISGTAKASFHTVLATYWYSEFKPLLWWISNGIILSGSATYALVKK  311 (324)
Q Consensus       245 ~~~~~~~~~~-~~~~~~~a~~~si~~~~~~v~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~~~~~  311 (324)
                      ++++..|..+ +.+++.++.+.+...+++|+++.++|++++||++++.+++|.++++.|+.+..+.++
T Consensus       223 ~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~~~  290 (299)
T PRK11453        223 VATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFGLR  290 (299)
T ss_pred             HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcchh
Confidence            9998888877 458999999999999999999999999999999999999999999999998765544

>PRK11689 aromatic amino acid exporter; Provisional

Probab=99.96  E-value=2.9e-26  Score=202.71  Aligned_cols=273  Identities=14%  Similarity=0.120  Sum_probs=194.5

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhhCCCCCcCCCCCCCChhhhhH
Q psy1072           6 SRYANIIFVVALYWCVSITTIFLNKTLLSELQLDAPIFVTWYQCLVSAIICFVLCQLSQQYPKNFSFPYGNPFDTNNMRN   85 (324)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~K~~l~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (324)
                      +.......++.+|+....    ..|..+++  + +|..+.+.|+..+.+++.++.   + ++   +      .++++++.
T Consensus         4 ~~~l~~l~a~~~Wg~~~~----~~k~~~~~--~-~P~~~~~~R~~~a~l~l~~~~---~-~~---~------~~~~~~~~   63 (295)
T PRK11689          4 KATLIGLIAILLWSTMVG----LIRGVSES--L-GPVGGAAMIYSVSGLLLLLTV---G-FP---R------LRQFPKRY   63 (295)
T ss_pred             chhHHHHHHHHHHHHHHH----HHHHHHcc--C-ChHHHHHHHHHHHHHHHHHHc---c-cc---c------cccccHHH
Confidence            334555667777865544    45998887  4 699999999999988887642   1 11   1      11122344


Q ss_pred             HHHHHHHHHHHHHHhhhhcc----ccchhHHHHHHHHHHHHHHHHHHHHhccccchhhHHHHHHHhhhceeeeeccCC-C
Q psy1072          86 LVPLTSCFILMLSFNNLCLK----NVGVAFYYVSRSLTTVFNVILTYILLQEKTSHLAILSCFIIFSGFALGVNQEGV-A  160 (324)
Q Consensus        86 ~~~~~~~~~~~~~~~~~al~----~~~~~~~~~l~~~~p~~~~~~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~~-~  160 (324)
                      .+..++.+.....+.+.+++    +.++...+++.++.|+++.+++++++|||++++++.+++++++|+++...++.. +
T Consensus        64 ~~~~~l~~~~~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~  143 (295)
T PRK11689         64 LLAGGLLFVSYEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGGDNGLS  143 (295)
T ss_pred             HHHHhHHHHHHHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecCCccch
Confidence            44445555566666666664    467788899999999999999999999999999999999999999887654321 0


Q ss_pred             -------ccchhhHHHHHHHHHHHHHHHHHHHHhhccCCCCceeeehhhhhhHHHHHHHHHHhhcccccccccCCCcchh
Q psy1072         161 -------GSFSTLGTIYGVISSFAQALFSIHTKEVLPYVNDKIWLVSYYNNVYAVALFIPIIFICGEVSELANYPHLFSF  233 (324)
Q Consensus       161 -------~~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~  233 (324)
                             .+.+..|+++++.++++||.|.++.||..++  .++...  +. ..+.+.+.+..... +.+.     ...++
T Consensus       144 ~~~~~~~~~~~~~G~~~~l~aa~~~A~~~v~~k~~~~~--~~~~~~--~~-~~~~~~l~~~~~~~-~~~~-----~~~~~  212 (295)
T PRK11689        144 LAELINNIASNPLSYGLAFIGAFIWAAYCNVTRKYARG--KNGITL--FF-ILTALALWIKYFLS-PQPA-----MVFSL  212 (295)
T ss_pred             hhhhhhccccChHHHHHHHHHHHHHHHHHHHHhhccCC--CCchhH--HH-HHHHHHHHHHHHHh-cCcc-----ccCCH
Confidence                   1134569999999999999999999998553  333332  22 22333333333332 2111     11233


Q ss_pred             HHHHHHHHHHHHHHHHHHH-HHHHHhccCchhhhhhccchHHHHHHHHHHHhCCCcchhhHhHHHHHhhhhhheehhc
Q psy1072         234 YFWILLTIGGVFGLTIGYV-TSLQIQVTSPLTHNISGTAKASFHTVLATYWYSEFKPLLWWISNGIILSGSATYALVK  310 (324)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~a~~~si~~~~~~v~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~~~~  310 (324)
                      ..|..+.+.++. ....|. .++.+|+.+|.+++...+++|+++.++|++++||++++.+++|+++++.|+.+....+
T Consensus       213 ~~~~~l~~~~~~-t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~~~  289 (295)
T PRK11689        213 PAIIKLLLAAAA-MGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWLAT  289 (295)
T ss_pred             HHHHHHHHHHHH-HHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhhhH
Confidence            445556666654 444444 4567999999999999999999999999999999999999999999999998775543

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=99.96  E-value=3.3e-28  Score=194.49  Aligned_cols=296  Identities=18%  Similarity=0.256  Sum_probs=256.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhhCCCCCcCCCCCCCChhhhhHHHHH
Q psy1072          10 NIIFVVALYWCVSITTIFLNKTLLSELQLDAPIFVTWYQCLVSAIICFVLCQLSQQYPKNFSFPYGNPFDTNNMRNLVPL   89 (324)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~K~~l~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (324)
                      -....+..|+.+|+.+++-||+++++.||+-...+.+.|...+...+.+..+.+.           .+++..+.|.|.|.
T Consensus         6 s~~~~~lsYc~sSIlmTltNKyVls~~gfnMnflll~vQSlvcvv~l~iLk~l~~-----------~~fR~t~aK~Wfpi   74 (309)
T COG5070           6 SELTASLSYCFSSILMTLTNKYVLSNLGFNMNFLLLAVQSLVCVVGLLILKFLRL-----------VEFRLTKAKKWFPI   74 (309)
T ss_pred             ccchHHHHHHHHHHHHHHhhHheecCCCCchhhHHHHHHHHHHHHHHHHHHHHhH-----------hheehhhhhhhcCH
Confidence            3456788999999999999999999999998999999999998888877665542           13556679999999


Q ss_pred             HHHHHHHHHHhhhhccccchhHHHHHHHHHHHHHHHHHHHHhccccchhhHHHHHHHhhhceeeeeccCC-----Cccch
Q psy1072          90 TSCFILMLSFNNLCLKNVGVAFYYVSRSLTTVFNVILTYILLQEKTSHLAILSCFIIFSGFALGVNQEGV-----AGSFS  164 (324)
Q Consensus        90 ~~~~~~~~~~~~~al~~~~~~~~~~l~~~~p~~~~~~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~~-----~~~~~  164 (324)
                      ++....+++.+..+++|.+++.+++.++++.+.++.....++|.|.+..+..+.+++++..+...++|.+     ....|
T Consensus        75 SfLLv~MIyt~SKsLqyL~vpiYTiFKNltII~iAygEvl~Fgg~vtsl~l~SFilMvlSS~va~w~D~q~~~~~~~~lN  154 (309)
T COG5070          75 SFLLVVMIYTSSKSLQYLAVPIYTIFKNLTIILIAYGEVLFFGGRVTSLELLSFILMVLSSVVATWGDQQASAFKAQILN  154 (309)
T ss_pred             HHHHHHHHHhcccceeeeeeeHHHHhccceeehhHhhHHHHhcCccchhhHHHHHHHHHHHHHhccchhhHHHHHhcccC
Confidence            9999999999999999999999999999999999999999999999999999999999999888776642     12344


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHhhccCCCCceeeehhhhhhHHHHHHHHHHhhcccccccccCCCcchhHHHHHHHHHHH
Q psy1072         165 TLGTIYGVISSFAQALFSIHTKEVLPYVNDKIWLVSYYNNVYAVALFIPIIFICGEVSELANYPHLFSFYFWILLTIGGV  244 (324)
Q Consensus       165 ~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  244 (324)
                       .|++|+..+++..+.+....|+..+-.+....+.++|+++.+..+++.+.+..+|..+- +.........+.++.++|+
T Consensus       155 -~GY~Wm~~NclssaafVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~-n~annl~~d~l~am~ISgl  232 (309)
T COG5070         155 -PGYLWMFTNCLSSAAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPG-NLANNLSVDSLMAMFISGL  232 (309)
T ss_pred             -CceEEEehhhHhHHHHHHHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccCCcc-hhhcCCChHHHHHHHHHHH
Confidence             69999999999999999999998887777889999999999999999999998665432 1111223334677889999


Q ss_pred             HHHHHHHHHHHHHhccCchhhhhhccchHHHHHHHHHHHhCCCcchhhHhHHHHHhhhhhheehhcccccchhh
Q psy1072         245 FGLTIGYVTSLQIQVTSPLTHNISGTAKASFHTVLATYWYSEFKPLLWWISNGIILSGSATYALVKKKELDRRK  318 (324)
Q Consensus       245 ~~~~~~~~~~~~~~~~~a~~~si~~~~~~v~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~~~~~~~~~~~~  318 (324)
                      ++.+.+|..-|+++.+++++.|+++.+++....+.|.++|||+.+...+..+.+-..+..+|++.+.+++++++
T Consensus       233 ~svgiSy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~iYavaks~k~q~q~  306 (309)
T COG5070         233 CSVGISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYAVAKSKKQQNQK  306 (309)
T ss_pred             HHhhhhhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            99999999999999999999999999999999999999999999999999999999999999998877655544

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=99.96  E-value=3.7e-26  Score=201.80  Aligned_cols=273  Identities=15%  Similarity=0.115  Sum_probs=212.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhhCCCCCcCCCCCCCChhhhhHHHHHH
Q psy1072          11 IIFVVALYWCVSITTIFLNKTLLSELQLDAPIFVTWYQCLVSAIICFVLCQLSQQYPKNFSFPYGNPFDTNNMRNLVPLT   90 (324)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~K~~l~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (324)
                      .....++|+.....    .|...++  . +|..+.+.|++++.+++.++...+++     +     ..+++++++....|
T Consensus        13 ~~~~~~iWg~~~~~----~K~~~~~--~-~p~~~~~~R~~~a~l~ll~~~~~~~~-----~-----~~~~~~~~~~~~~g   75 (292)
T PRK11272         13 LFALYIIWGSTYLV----IRIGVES--W-PPLMMAGVRFLIAGILLLAFLLLRGH-----P-----LPTLRQWLNAALIG   75 (292)
T ss_pred             HHHHHHHHhhHHHH----HHHHhcc--C-CHHHHHHHHHHHHHHHHHHHHHHhCC-----C-----CCcHHHHHHHHHHH
Confidence            44566677665554    4988875  4 69999999999999888877654321     1     12446677777777


Q ss_pred             HHH-HHHHHHhhhhc-cccchhHHHHHHHHHHHHHHHHHHHHhccccchhhHHHHHHHhhhceeeeeccCCCccchhhHH
Q psy1072          91 SCF-ILMLSFNNLCL-KNVGVAFYYVSRSLTTVFNVILTYILLQEKTSHLAILSCFIIFSGFALGVNQEGVAGSFSTLGT  168 (324)
Q Consensus        91 ~~~-~~~~~~~~~al-~~~~~~~~~~l~~~~p~~~~~~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~G~  168 (324)
                      .+. .....+.+.+. ++++++.++++.++.|+++++++++ +|||++++++.+++++++|+.+...++  +.+.+..|+
T Consensus        76 ~~~~~~~~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~~~--~~~~~~~G~  152 (292)
T PRK11272         76 LLLLAVGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNSGG--NLSGNPWGA  152 (292)
T ss_pred             HHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhcCc--ccccchHHH
Confidence            664 45667778888 9999999999999999999999986 699999999999999999998865432  223456899


Q ss_pred             HHHHHHHHHHHHHHHHHHhhccCCCCceeeehhhhhhHHHHHHHHHHhhcccccccccCCCcchhHHHHHHHHHHHHHHH
Q psy1072         169 IYGVISSFAQALFSIHTKEVLPYVNDKIWLVSYYNNVYAVALFIPIIFICGEVSELANYPHLFSFYFWILLTIGGVFGLT  248 (324)
Q Consensus       169 ~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (324)
                      +++++++++||.+.+..||..++   ++.....++...+...+.+.....++...     ...+...|..+.+.++++..
T Consensus       153 l~~l~a~~~~a~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~i~~l~i~~s~  224 (292)
T PRK11272        153 ILILIASASWAFGSVWSSRLPLP---VGMMAGAAEMLAAGVVLLIASLLSGERLT-----ALPTLSGFLALGYLAVFGSI  224 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCC---cchHHHHHHHHHHHHHHHHHHHHcCCccc-----ccCCHHHHHHHHHHHHHHHH
Confidence            99999999999999999987432   23445567777777777777655432211     11234457777888888887


Q ss_pred             HHHHHH-HHHhccCchhhhhhccchHHHHHHHHHHHhCCCcchhhHhHHHHHhhhhhheehhcc
Q psy1072         249 IGYVTS-LQIQVTSPLTHNISGTAKASFHTVLATYWYSEFKPLLWWISNGIILSGSATYALVKK  311 (324)
Q Consensus       249 ~~~~~~-~~~~~~~a~~~si~~~~~~v~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~~~~~  311 (324)
                      ..+..+ ..+++.++.+.+...+++|+.+.++|++++||++++.+++|.++++.|+.+.++.++
T Consensus       225 ~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~~~  288 (292)
T PRK11272        225 IAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLGKY  288 (292)
T ss_pred             HHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHh
Confidence            777665 569999999999999999999999999999999999999999999999999776544

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=99.96  E-value=6.6e-26  Score=200.22  Aligned_cols=274  Identities=12%  Similarity=0.106  Sum_probs=207.2

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhhCCCCCcCCCCCCCChhhhhHHH
Q psy1072           8 YANIIFVVALYWCVSITTIFLNKTLLSELQLDAPIFVTWYQCLVSAIICFVLCQLSQQYPKNFSFPYGNPFDTNNMRNLV   87 (324)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~K~~l~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (324)
                      .....++.++|...+.    ..|+..++  + +|..+.++|++++.+++.++...++        +   +.++++++..+
T Consensus        14 ~~~~~la~~~~~~~~~----~~K~~~~~--~-~~~~~~~~R~~~a~l~l~~~~~~~~--------~---~~~~~~~~~~~   75 (293)
T PRK10532         14 ILLLLIAMASIQSGAS----LAKSLFPL--V-GAPGVTALRLALGTLILIAIFKPWR--------L---RFAKEQRLPLL   75 (293)
T ss_pred             HHHHHHHHHHHHhhHH----HHHHHHHH--c-CHHHHHHHHHHHHHHHHHHHHhHHh--------c---cCCHHHHHHHH
Confidence            3455566667765544    46999987  4 5888999999999988876543211        0   13456777888


Q ss_pred             HHHHHHHHHHHHhhhhccccchhHHHHHHHHHHHHHHHHHHHHhccccchhhHHHHHHHhhhceeeeeccCCCccchhhH
Q psy1072          88 PLTSCFILMLSFNNLCLKNVGVAFYYVSRSLTTVFNVILTYILLQEKTSHLAILSCFIIFSGFALGVNQEGVAGSFSTLG  167 (324)
Q Consensus        88 ~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~p~~~~~~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~G  167 (324)
                      ..|++......+.+.+++|+|++.++++..+.|+++.+++    +||+++.  ..+.++++|+.+...++.+..+.+..|
T Consensus        76 ~~g~~~~~~~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~----~~~~~~~--~~~~i~~~Gv~li~~~~~~~~~~~~~G  149 (293)
T PRK10532         76 FYGVSLGGMNYLFYLSIQTVPLGIAVALEFTGPLAVALFS----SRRPVDF--VWVVLAVLGLWFLLPLGQDVSHVDLTG  149 (293)
T ss_pred             HHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHh----cCChHHH--HHHHHHHHHHheeeecCCCcccCChHH
Confidence            8888888888888999999999999999999999999887    3666544  446677899987664322222345689


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhccCCCCceeeehhhhhhHHHHHHHHHHhhcccccccccCCCcchhHHHHHHHHHHHHHH
Q psy1072         168 TIYGVISSFAQALFSIHTKEVLPYVNDKIWLVSYYNNVYAVALFIPIIFICGEVSELANYPHLFSFYFWILLTIGGVFGL  247 (324)
Q Consensus       168 ~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (324)
                      ++++++++++||+|.+..||..++.  ++... .+....+++.+.|..... +...      ..+...|...++.+++++
T Consensus       150 ~ll~l~aa~~~a~~~v~~r~~~~~~--~~~~~-~~~~~~~~~~l~~~~~~~-~~~~------~~~~~~~~~~l~lgv~~t  219 (293)
T PRK10532        150 AALALGAGACWAIYILSGQRAGAEH--GPATV-AIGSLIAALIFVPIGALQ-AGEA------LWHWSILPLGLAVAILST  219 (293)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhccC--CchHH-HHHHHHHHHHHHHHHHHc-cCcc------cCCHHHHHHHHHHHHHHH
Confidence            9999999999999999999986543  33344 455566667777766553 2111      123334555678888888


Q ss_pred             HHHHHHH-HHHhccCchhhhhhccchHHHHHHHHHHHhCCCcchhhHhHHHHHhhhhhheehhcccccc
Q psy1072         248 TIGYVTS-LQIQVTSPLTHNISGTAKASFHTVLATYWYSEFKPLLWWISNGIILSGSATYALVKKKELD  315 (324)
Q Consensus       248 ~~~~~~~-~~~~~~~a~~~si~~~~~~v~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~~~~~~~~~  315 (324)
                      ..++..+ +.+++.+|.+++++.+++|+++.++|++++||++++.+++|.++++.|++.+.+..++|.+
T Consensus       220 ~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~~~~~~~  288 (293)
T PRK10532        220 ALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLTIRREPK  288 (293)
T ss_pred             HHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhcCCCCCC
Confidence            8888664 6699999999999999999999999999999999999999999999999999877655444

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=99.95  E-value=8.2e-26  Score=196.65  Aligned_cols=251  Identities=15%  Similarity=0.203  Sum_probs=199.9

Q ss_pred             HHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhhCCCCCcCCCCCCCChhhhhHHHHHHH-HHHHHHHHhhhhccc
Q psy1072          28 LNKTLLSELQLDAPIFVTWYQCLVSAIICFVLCQLSQQYPKNFSFPYGNPFDTNNMRNLVPLTS-CFILMLSFNNLCLKN  106 (324)
Q Consensus        28 ~~K~~l~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~al~~  106 (324)
                      ..|+.+++.  .+|....+.|.+.+.+++.+....+         +     ++++++.....+. +..+...+.+.|++|
T Consensus         7 ~~k~~~~~~--~~~~~~~~~r~~~~~l~l~~~~~~~---------~-----~~~~~~~~~~~~~~~~~l~~~~~~~a~~~   70 (260)
T TIGR00950         7 VIGQYLEGQ--VPLYFAVFRRLIFALLLLLPLLRRR---------P-----PLKRLLRLLLLGALQIGVFYVLYFVAVKR   70 (260)
T ss_pred             HHHHHHhcC--CCHHHHHHHHHHHHHHHHHHHHHhc---------c-----CHhHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            459988762  3789999999999988877654321         1     1233455555554 457888899999999


Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHhccccchhhHHHHHHHhhhceeeeeccCCCccchhhHHHHHHHHHHHHHHHHHHHH
Q psy1072         107 VGVAFYYVSRSLTTVFNVILTYILLQEKTSHLAILSCFIIFSGFALGVNQEGVAGSFSTLGTIYGVISSFAQALFSIHTK  186 (324)
Q Consensus       107 ~~~~~~~~l~~~~p~~~~~~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~G~~~~l~s~~~~a~~~v~~~  186 (324)
                      ++++..+++.++.|+++++++.+++|||++++++.++.++++|+.+...++  +.+.+..|+.++++++++++.+.++.|
T Consensus        71 ~~~~~~~ii~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~--~~~~~~~G~~~~l~a~~~~a~~~~~~k  148 (260)
T TIGR00950        71 LPVGEAALLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDG--NLSINPAGLLLGLGSGISFALGTVLYK  148 (260)
T ss_pred             cChhhhHHHHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccCC--cccccHHHHHHHHHHHHHHHHHHHHHh
Confidence            999999999999999999999999999999999999999999998866443  234556899999999999999999999


Q ss_pred             hhccCCCCceeeehhhhhhHHHHHHHHHHhhcccccccccCCCcchhHHHHHHHHHHHHHHHHHHHHH-HHHhccCchhh
Q psy1072         187 EVLPYVNDKIWLVSYYNNVYAVALFIPIIFICGEVSELANYPHLFSFYFWILLTIGGVFGLTIGYVTS-LQIQVTSPLTH  265 (324)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~a~~~  265 (324)
                      +..++.+.++.....+....+.+.+.|.....++...       .+...|..+...++++....+..+ +++++.++.++
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~  221 (260)
T TIGR00950       149 RLVKKEGPELLQFTGWVLLLGALLLLPFAWFLGPNPQ-------ALSLQWGALLYLGLIGTALAYFLWNKGLTLVDPSAA  221 (260)
T ss_pred             HHhhcCCchHHHHHHHHHHHHHHHHHHHHHhcCCCCC-------cchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHH
Confidence            9876554444444445677788888877766432211       133446667778888777666655 56999999999


Q ss_pred             hhhccchHHHHHHHHHHHhCCCcchhhHhHHHHHhhhh
Q psy1072         266 NISGTAKASFHTVLATYWYSEFKPLLWWISNGIILSGS  303 (324)
Q Consensus       266 si~~~~~~v~~~~~~~~~~~e~~~~~~~~G~~li~~g~  303 (324)
                      +...+++|+++.+++++++||++++.+++|..+++.|+
T Consensus       222 s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~  259 (260)
T TIGR00950       222 SILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV  259 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence            99999999999999999999999999999999999986

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=99.95  E-value=4.5e-26  Score=201.56  Aligned_cols=287  Identities=11%  Similarity=0.051  Sum_probs=195.8

Q ss_pred             CCccccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhhCCCCCcCCCCCCCCh
Q psy1072           1 MSSSISRYANIIFVVALYWCVSITTIFLNKTLLSELQLDAPIFVTWYQCLVSAIICFVLCQLSQQYPKNFSFPYGNPFDT   80 (324)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~l~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~   80 (324)
                      |+++.+.........++|+..+...    |.. .+  . +|..+.++|.+++.+++.++...+++.+   +..+ ...++
T Consensus         3 ~~~~~~g~~~~l~a~~~wg~~~~~~----k~~-~~--~-~~~~~~~~R~~~a~~~l~~~~~~~~~~~---~~~~-~~~~~   70 (296)
T PRK15430          3 AKQTRQGVLLALAAYFIWGIAPAYF----KLI-YY--V-PADEILTHRVIWSFFFMVVLMSICRQWS---YLKT-LIQTP   70 (296)
T ss_pred             chhhhhHHHHHHHHHHHHHHHHHHH----HHh-cC--C-CHHHHHHHHHHHHHHHHHHHHHHHccHH---HHHH-HHcCH
Confidence            3445555666777778887776543    865 33  4 5999999999999887766554322110   1000 00123


Q ss_pred             hhhhHHHHHHHHHHHHHHHhhhhccccchhHHHHHHHHHHHHHHHHHHHHhccccchhhHHHHHHHhhhceeeeeccCCC
Q psy1072          81 NNMRNLVPLTSCFILMLSFNNLCLKNVGVAFYYVSRSLTTVFNVILTYILLQEKTSHLAILSCFIIFSGFALGVNQEGVA  160 (324)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~p~~~~~~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~  160 (324)
                      +++......++.......+.++|++++|++.++++.++.|+++.+++++++|||+++++|.+++++++|+++...+++  
T Consensus        71 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~~~~--  148 (296)
T PRK15430         71 QKIFMLAVSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLWTFG--  148 (296)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHcC--
Confidence            333334444556678899999999999999999999999999999999999999999999999999999998764321  


Q ss_pred             ccchhhHHHHHHHHHHHHHHHHHHHHhhccCCCCceeeehhhhhhHHHHHHHHHHhhcccccccccCCCcchhHHHHHHH
Q psy1072         161 GSFSTLGTIYGVISSFAQALFSIHTKEVLPYVNDKIWLVSYYNNVYAVALFIPIIFICGEVSELANYPHLFSFYFWILLT  240 (324)
Q Consensus       161 ~~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~  240 (324)
                       +.    ..++++++++||.|.+..|+..++...+......+....+.....+.   . +.... ... ......+....
T Consensus       149 -~~----~~~~l~aa~~~a~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~-~~~-~~~~~~~~~~~  217 (296)
T PRK15430        149 -SL----PIIALGLAFSFAFYGLVRKKIAVEAQTGMLIETMWLLPVAAIYLFAI---A-DSSTS-HMG-QNPMSLNLLLI  217 (296)
T ss_pred             -Cc----cHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHH---c-cCCcc-ccc-CCcHHHHHHHH
Confidence             11    14688899999999999988743221111222223333332222211   1 11110 000 11111233444


Q ss_pred             HHHHHHHHHHHHHHHHHhccCchhhhhhccchHHHHHHHHHHHhCCCcchhhHhHHHHHhhhhhheehhccc
Q psy1072         241 IGGVFGLTIGYVTSLQIQVTSPLTHNISGTAKASFHTVLATYWYSEFKPLLWWISNGIILSGSATYALVKKK  312 (324)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~a~~~si~~~~~~v~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~~~~~~  312 (324)
                      ..|+.+.+.+...+..+++.+|.+++.+.+++|+++.++|++++||++++.+++|+++++.|+.+...+...
T Consensus       218 ~~g~~t~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~~~~~~  289 (296)
T PRK15430        218 AAGIVTTVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVMDAIY  289 (296)
T ss_pred             HHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            455554554555557799999999999999999999999999999999999999999998888877655443

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=99.95  E-value=2.3e-25  Score=196.00  Aligned_cols=272  Identities=14%  Similarity=0.174  Sum_probs=206.6

Q ss_pred             HHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhhCCCCCcCCCCCCCChhhhhHHHHHHHHHHHHHHHhhhhccccch
Q psy1072          30 KTLLSELQLDAPIFVTWYQCLVSAIICFVLCQLSQQYPKNFSFPYGNPFDTNNMRNLVPLTSCFILMLSFNNLCLKNVGV  109 (324)
Q Consensus        30 K~~l~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~  109 (324)
                      +.+-++ |.+.|.+.++.-.+.-.++.......++..+   +..   +..++++.+++..+++....+++.+.|++|++.
T Consensus        33 ~~l~~~-~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~---~~~---~~~~~~~w~y~lla~~Dv~aN~~~v~a~~yTsv  105 (334)
T PF06027_consen   33 SLLANK-GVNIPTFQSFFNYVLLALVYTPILLYRRGFK---KWL---KVLKRPWWKYFLLALLDVEANYLVVLAYQYTSV  105 (334)
T ss_pred             HHHHhc-CccCcHHHHHHHHHHHHHHHhhhhhhccccc---cch---hhcchhHHHHHHHHHHHHHHHHHHHHHhhcccH
Confidence            444444 7778888777776655554444333332111   111   233456777778899999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhccccchhhHHHHHHHhhhceeeeeccC------CCccchhhHHHHHHHHHHHHHHHHH
Q psy1072         110 AFYYVSRSLTTVFNVILTYILLQEKTSHLAILSCFIIFSGFALGVNQEG------VAGSFSTLGTIYGVISSFAQALFSI  183 (324)
Q Consensus       110 ~~~~~l~~~~p~~~~~~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~------~~~~~~~~G~~~~l~s~~~~a~~~v  183 (324)
                      +.++++.+++.+++++++++++|+|+++.++.|+++++.|+++....|.      .+.+....|+++++.++..||++++
T Consensus       106 tS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~~~~~~~~~~~~i~GDll~l~~a~lya~~nV  185 (334)
T PF06027_consen  106 TSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVLSGSDSSSGSNPILGDLLALLGAILYAVSNV  185 (334)
T ss_pred             hHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeecccccccCCCCCccchhHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999987654432      1234568999999999999999999


Q ss_pred             HHHhhccCCCCceeeehhhhhhHHHHHHHHHHhhcccccccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhccCch
Q psy1072         184 HTKEVLPYVNDKIWLVSYYNNVYAVALFIPIIFICGEVSELANYPHLFSFYFWILLTIGGVFGLTIGYVTSLQIQVTSPL  263 (324)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~  263 (324)
                      +.|+..++.  +..+......+++.++..+...+. |..+..+.+ + +...+...+..++.-+......-..++.++|+
T Consensus       186 ~~E~~v~~~--~~~~~lg~~Glfg~ii~~iq~~il-e~~~i~~~~-w-~~~~~~~~v~~~~~lf~~y~l~p~~l~~ssAt  260 (334)
T PF06027_consen  186 LEEKLVKKA--PRVEFLGMLGLFGFIISGIQLAIL-ERSGIESIH-W-TSQVIGLLVGYALCLFLFYSLVPIVLRMSSAT  260 (334)
T ss_pred             HHHHhcccC--CHHHHHHHHHHHHHHHHHHHHHhe-ehhhhhccC-C-ChhhHHHHHHHHHHHHHHHHHHHHHHHhCccc
Confidence            999998864  456777788888988888877765 665554332 2 22323333333333333333333558999999


Q ss_pred             hhhhhccchHHHHHHHHHHHhCCCcchhhHhHHHHHhhhhhheehhcccc
Q psy1072         264 THNISGTAKASFHTVLATYWYSEFKPLLWWISNGIILSGSATYALVKKKE  313 (324)
Q Consensus       264 ~~si~~~~~~v~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~~~~~~~  313 (324)
                      ..++.....+..+++++++++|+++++..++|.+++++|..+|+..+.++
T Consensus       261 ~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~~~~  310 (334)
T PF06027_consen  261 FFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAESPE  310 (334)
T ss_pred             eeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccCCcc
Confidence            99998899999999999999999999999999999999999999865543

Some of the sequences in this family are annotated as putative membrane proteins.

>KOG1443|consensus

Probab=99.94  E-value=1.6e-24  Score=181.53  Aligned_cols=295  Identities=20%  Similarity=0.239  Sum_probs=242.6

Q ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhhCCCCCcCCCCCCCChh-hh
Q psy1072           5 ISRYANIIFVVALYWCVSITTIFLNKTLLSELQLDAPIFVTWYQCLVSAIICFVLCQLSQQYPKNFSFPYGNPFDTN-NM   83 (324)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~K~~l~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~   83 (324)
                      +.+.++....+.+|++.|+....++|+.-.+  |+.|++++..|+++-.++.....+..+.+..+.+    .+++|+ ..
T Consensus        11 ~~~rV~~L~lVl~yY~~Si~Ltf~~~~~~~~--f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r----~~~sw~~~L   84 (349)
T KOG1443|consen   11 LMNRVLTLALVLLYYFLSIGLTFYFKWLTKN--FHFPLFVTSLHLAVKFLFAALSRRLYQCSVPRAR----VVLSWRDYL   84 (349)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhhhhcC--cCCchHHHHHHHHHHHHHHHHHHHHHhccCCccc----cCCcHHHHH
Confidence            3445555666699999999999999998877  5579999999999988888877666543222112    246664 56


Q ss_pred             hHHHHHHHHHHHHHHHhhhhccccchhHHHHHHHHHHHHHHHHHHHHhccccchhhHHHHHHHhhhceeeeeccCCCccc
Q psy1072          84 RNLVPLTSCFILMLSFNNLCLKNVGVAFYYVSRSLTTVFNVILTYILLQEKTSHLAILSCFIIFSGFALGVNQEGVAGSF  163 (324)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~p~~~~~~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~  163 (324)
                      |+..|.+++.+....+.|++++|++.+.+++.|+.+++|+.+++..+.-||+++.-.+.+.++..|+++.+..+   .++
T Consensus        85 r~~aPtalata~DIGLSN~sl~yVtlSlYTM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~Ks---Tqf  161 (349)
T KOG1443|consen   85 RRLAPTALATALDIGLSNWSLEYVTLSLYTMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKS---TQF  161 (349)
T ss_pred             HHhhhhhhhhhcccccccceeeeeeeeeeeeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEecc---cce
Confidence            77889999999999999999999999999999999999999999999889999999999999999999988754   368


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHhhccCCC---CceeeehhhhhhHHHHHHHHHHhhccccccc-----ccCCCcc-hhH
Q psy1072         164 STLGTIYGVISSFAQALFSIHTKEVLPYVN---DKIWLVSYYNNVYAVALFIPIIFICGEVSEL-----ANYPHLF-SFY  234 (324)
Q Consensus       164 ~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-----~~~~~~~-~~~  234 (324)
                      +..|+.++++++++.++...+.|+++++.+   .+|+...++..+.....++|..+..+.....     +...... -..
T Consensus       162 ~i~Gf~lv~~aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~r  241 (349)
T KOG1443|consen  162 NIEGFFLVLAASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTGLILR  241 (349)
T ss_pred             eehhHHHHHHHHHhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCccHHHH
Confidence            889999999999999999999999998765   5799999999999999999988887332222     1111111 112


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhccCchhhhhhccchHHHHHHHHHHHhCCCcchhhHhHHHHHhhhhhheeh
Q psy1072         235 FWILLTIGGVFGLTIGYVTSLQIQVTSPLTHNISGTAKASFHTVLATYWYSEFKPLLWWISNGIILSGSATYAL  308 (324)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~si~~~~~~v~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~~  308 (324)
                      ....+...|..++....+-+....+++..+.|+.+..|.+.+.+++..+.+|+++...|+|..++..|+..+..
T Consensus       242 v~g~i~l~g~laF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~~~  315 (349)
T KOG1443|consen  242 VIGLISLGGLLAFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLHRN  315 (349)
T ss_pred             HHHHHHHHHHHHHHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHhcc
Confidence            23445666777777777777779999999999999999999999999999999999999999999999999944

>KOG1580|consensus

Probab=99.90  E-value=1.9e-23  Score=168.60  Aligned_cols=280  Identities=14%  Similarity=0.205  Sum_probs=233.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcCC--------CCchHHHHHHHHHHHHHHHHHHHHHhhhCCCCCcCCCCCCCChhhhhH
Q psy1072          14 VVALYWCVSITTIFLNKTLLSELQ--------LDAPIFVTWYQCLVSAIICFVLCQLSQQYPKNFSFPYGNPFDTNNMRN   85 (324)
Q Consensus        14 ~~~~~~~~~~~~~~~~K~~l~~~~--------~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (324)
                      ..++|..-++.   ..|..-..|+        |+..+.+.++|+.+..+..-++...+++          .+.++.+-+.
T Consensus        21 ifvCYF~yGI~---QEkitrGkYg~~g~~~E~FTfalaLVf~qC~~N~vfAkvl~~ir~~----------~~~D~t~~~~   87 (337)
T KOG1580|consen   21 IFVCYFVYGIQ---QEKITRGKYGLPGESIEKFTFALALVFFQCTANTVFAKVLFLIRKK----------TEIDNTPTKM   87 (337)
T ss_pred             hhheehhhhhH---HHHhhccccCCCCcchheehHHHHHHHHHHHHHHHHHHhheeeccc----------ccccCCcchH
Confidence            34455555543   3454433343        6778899999999998888765544221          1244455778


Q ss_pred             HHHHHHHHHHHHHHhhhhccccchhHHHHHHHHHHHHHHHHHHHHhccccchhhHHHHHHHhhhceeeeeccC----CCc
Q psy1072          86 LVPLTSCFILMLSFNNLCLKNVGVAFYYVSRSLTTVFNVILTYILLQEKTSHLAILSCFIIFSGFALGVNQEG----VAG  161 (324)
Q Consensus        86 ~~~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~p~~~~~~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~----~~~  161 (324)
                      +...++.+.+.++..|.|++|+|-++..+-+++.|+-+++++.++.+++.+|+++++++.+++|+++..+.+.    .+.
T Consensus        88 YaAcs~sYLlAMVssN~Alq~vpYPTqVlgKScKPIPVMilGVl~~~KsY~w~kY~cVL~IV~GValFmYK~~Kv~g~e~  167 (337)
T KOG1580|consen   88 YAACSASYLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMILGVLFAHKSYHWRKYCCVLMIVVGVALFMYKENKVGGAED  167 (337)
T ss_pred             HHHHHHHHHHHHHhccchhcccCCcHHHhcccCCCcceeeeehhhhcccccHHHHHHHHHHHHHHHHhhccccccCCCcc
Confidence            8889999999999999999999999999999999999999999999999999999999999999999765432    233


Q ss_pred             cchhhHHHHHHHHHHHHHHHHHHHHhhccCCCCceeeehhhhhhHHHHHHHHHHhhcccccccccCCCcchhHHHHHHHH
Q psy1072         162 SFSTLGTIYGVISSFAQALFSIHTKEVLPYVNDKIWLVSYYNNVYAVALFIPIIFICGEVSELANYPHLFSFYFWILLTI  241 (324)
Q Consensus       162 ~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  241 (324)
                      +...+|-++.++|-...+.....++++.+.+..+...+++++++++.+.+....++.||..+...+. ...|..|+-+..
T Consensus       168 ~t~g~GElLL~lSL~mDGlTg~~Qdrira~yq~~g~~MM~~~NlwStL~Lg~g~lfTGElweF~yF~-~RhP~~~~~l~l  246 (337)
T KOG1580|consen  168 KTFGFGELLLILSLAMDGLTGSIQDRIRASYQRTGTSMMFYTNLWSTLYLGAGLLFTGELWEFFYFV-QRHPYVFWDLTL  246 (337)
T ss_pred             cccchHHHHHHHHHHhcccchhHHHHHHHhhccCchhhHHHHHHHHHHHhhhhheehhhHHHHHHHH-HhccHHHHHHHH
Confidence            3445799999999999999999999998888888889999999999999999999999987765543 345666778888


Q ss_pred             HHHHHHHHHHHHHHHHhccCchhhhhhccchHHHHHHHHHHHhCCCcchhhHhHHHHHhhhhhhee
Q psy1072         242 GGVFGLTIGYVTSLQIQVTSPLTHNISGTAKASFHTVLATYWYSEFKPLLWWISNGIILSGSATYA  307 (324)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~a~~~si~~~~~~v~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~  307 (324)
                      .++.+...++..+..+...+|.+-|++...+..++++.|+++|++++++.||+|..+++.|...=.
T Consensus       247 ~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D~  312 (337)
T KOG1580|consen  247 LAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTADV  312 (337)
T ss_pred             HHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhHh
Confidence            888888899999999999999999999999999999999999999999999999999999987643

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.89  E-value=5.2e-21  Score=168.16  Aligned_cols=256  Identities=13%  Similarity=0.101  Sum_probs=174.1

Q ss_pred             HHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhhCCCCCcCCCCCCCChhhhhHHHHHHHHHHHHHHHhhhhcccc
Q psy1072          28 LNKTLLSELQLDAPIFVTWYQCLVSAIICFVLCQLSQQYPKNFSFPYGNPFDTNNMRNLVPLTSCFILMLSFNNLCLKNV  107 (324)
Q Consensus        28 ~~K~~l~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~  107 (324)
                      .+|...++   +++  ..+.+...+.+++.++...+..++   +.+   +.+++.+......+........+.+.++++.
T Consensus        19 ~~k~~~~~---~~~--~~~~~~~~~~~~l~~~~~~~~~~~---~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~   87 (281)
T TIGR03340        19 MAKSHADK---EPD--FLWWALLAHSVLLTPYGLWYLAQV---GWS---RLPATFWLLLAISAVANMVYFLGLAQAYHHA   87 (281)
T ss_pred             HHhhcCCc---hhH--HHHHHHHHHHHHHHHHHHHhcccC---CCC---CcchhhHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            45755443   133  245566666666665554321111   112   1233444455555566778888999999999


Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHhccccchhhHHHHHHHhhhceeeeeccCCCccchhhHHHHHHHHHHHHHHHHHHHHh
Q psy1072         108 GVAFYYVSRSLTTVFNVILTYILLQEKTSHLAILSCFIIFSGFALGVNQEGVAGSFSTLGTIYGVISSFAQALFSIHTKE  187 (324)
Q Consensus       108 ~~~~~~~l~~~~p~~~~~~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~G~~~~l~s~~~~a~~~v~~~~  187 (324)
                      |++..+.+.++.|+++.+++++++|||+++++|.++.+++.|+.+...++.+  +.+..|+.+++++++++++|.+..|+
T Consensus        88 ~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~~~~--~~~~~g~~~~l~aal~~a~~~i~~k~  165 (281)
T TIGR03340        88 DVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLSRFA--QHRRKAYAWALAAALGTAIYSLSDKA  165 (281)
T ss_pred             ChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhccccc--ccchhHHHHHHHHHHHHHHhhhhccc
Confidence            9999999999999999999999999999999999999999999886644322  23457888999999999999998887


Q ss_pred             hccCCCCcee-eehhhhhhHHHHHH-HHHHhh---cccccccccCCCcchhHHHHHHHHHHHHHHHHHHH-HHHHHhccC
Q psy1072         188 VLPYVNDKIW-LVSYYNNVYAVALF-IPIIFI---CGEVSELANYPHLFSFYFWILLTIGGVFGLTIGYV-TSLQIQVTS  261 (324)
Q Consensus       188 ~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  261 (324)
                      ..++.  ++. ....+. ..+.+.. .|....   .++. ..    ...+.. +....+.+.+.....|. .+..+++.+
T Consensus       166 ~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~----~~~~~~-~~~~~~~~~~~s~l~~~l~~~al~~~~  236 (281)
T TIGR03340       166 AALGV--PAFYSALGYL-GIGFLAMGWPFLLLYLKRHGR-SM----FPYARQ-ILPSATLGGLMIGGAYALVLWAMTRLP  236 (281)
T ss_pred             cccch--hcccccHHHH-HHHHHHHHHHHHHHHHHHhcc-ch----hhhHHH-HHHHHHHHHHHHHHHHHHHHHHHhhCC
Confidence            64322  222 222222 1222221 222221   1111 10    011222 23334444454555554 446799999


Q ss_pred             chhhhhhccchHHHHHHHHHHHhCCCcchhhHhHHHHHhhhhhh
Q psy1072         262 PLTHNISGTAKASFHTVLATYWYSEFKPLLWWISNGIILSGSAT  305 (324)
Q Consensus       262 a~~~si~~~~~~v~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~  305 (324)
                      +.+.+...+++|+++.++|++++||++++.+++|+++++.|+.+
T Consensus       237 a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l  280 (281)
T TIGR03340       237 VATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV  280 (281)
T ss_pred             ceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence            99999999999999999999999999999999999999999875

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>KOG1581|consensus

Probab=99.89  E-value=4.7e-21  Score=160.92  Aligned_cols=266  Identities=12%  Similarity=0.106  Sum_probs=226.4

Q ss_pred             CCCchHHHHHHHHHHHHHHHHHHHHHhhhCCCCCcCCCCCCCChhhhhHHHHHHHHHHHHHHHhhhhccccchhHHHHHH
Q psy1072          37 QLDAPIFVTWYQCLVSAIICFVLCQLSQQYPKNFSFPYGNPFDTNNMRNLVPLTSCFILMLSFNNLCLKNVGVAFYYVSR  116 (324)
Q Consensus        37 ~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l~  116 (324)
                      .|..|.++.+.|-+.+.++-..+...++.     +.     ..++.+.++...++....+..+++.|++|+|-++..+.+
T Consensus        47 rF~~~~fL~~~q~l~~~~~s~~~l~~~k~-----~~-----~~~apl~~y~~is~tn~~s~~~~yeaLKyvSyPtq~LaK  116 (327)
T KOG1581|consen   47 RFEHSLFLVFCQRLVALLVSYAMLKWWKK-----EL-----SGVAPLYKYSLISFTNTLSSWCGYEALKYVSYPTQTLAK  116 (327)
T ss_pred             cccccHHHHHHHHHHHHHHHHHHHhcccc-----cC-----CCCCchhHHhHHHHHhhcchHHHHHHHHhccchHHHHHH
Confidence            47889999999999998888665544321     11     234558888888999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhccccchhhHHHHHHHhhhceeeeeccC------CCccchhhHHHHHHHHHHHHHHHHHHHHhhcc
Q psy1072         117 SLTTVFNVILTYILLQEKTSHLAILSCFIIFSGFALGVNQEG------VAGSFSTLGTIYGVISSFAQALFSIHTKEVLP  190 (324)
Q Consensus       117 ~~~p~~~~~~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~------~~~~~~~~G~~~~l~s~~~~a~~~v~~~~~~~  190 (324)
                      ++.-+-+++.+.++.|+|++..++....++..|+.+....+.      ...+++++|+.++..+-++.++.+..++++.+
T Consensus       117 scKmIPVmlmg~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~s~~~~g~~ns~~G~~Ll~~~L~fDgfTn~tQd~lf~  196 (327)
T KOG1581|consen  117 SCKMIPVMLMGTLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSDSSSKSGRENSPIGILLLFGYLLFDGFTNATQDSLFK  196 (327)
T ss_pred             HhhhhHHHHHHHHHhcCccCcHHHHHHHHHHhheeeEEEecCCCCccccCCCCchHhHHHHHHHHHHHhhHHhHHHHHhc
Confidence            999999999999999999999999999999999987543321      12246789999999999999999999999999


Q ss_pred             CCCCceeeehhhhhhHHHHHHHHHHhhcccccccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhccCchhhhhhcc
Q psy1072         191 YVNDKIWLVSYYNNVYAVALFIPIIFICGEVSELANYPHLFSFYFWILLTIGGVFGLTIGYVTSLQIQVTSPLTHNISGT  270 (324)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~si~~~  270 (324)
                      +.+.++++++++.|+++++.-.......|...+..++- ..+|..+.-+...+.++.+.+...+..+++.+|.+...+..
T Consensus       197 ~~k~s~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~-~~hp~~~~Di~l~s~~gavGQ~FI~~TI~~FGslt~t~I~t  275 (327)
T KOG1581|consen  197 KYKVSSLHMMFGVNLFSAILNGTYLILQGHLLPAVSFI-KEHPDVAFDILLYSTCGAVGQLFIFYTIERFGSLTFTTIMT  275 (327)
T ss_pred             cCCccHhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHH-HcChhHHHHHHHHHHhhhhhhheehhhHhhcccHHHHHHHH
Confidence            99999999999999999998887765555444333322 34677788888899999999999999999999999999999


Q ss_pred             chHHHHHHHHHHHhCCCcchhhHhHHHHHhhhhhheehhcccc
Q psy1072         271 AKASFHTVLATYWYSEFKPLLWWISNGIILSGSATYALVKKKE  313 (324)
Q Consensus       271 ~~~v~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~~~~~~~  313 (324)
                      .|..++++++.+.+|++++..||+|..+++.|..+-...+.++
T Consensus       276 tRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~~~~k~~~  318 (327)
T KOG1581|consen  276 TRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLEILLKKKK  318 (327)
T ss_pred             HHHHHHHHHHHHHhCCccchhhccCeeeehHHHHHHHHHHHhc
Confidence            9999999999999999999999999999999999877666553

>TIGR00688 rarD rarD protein

Probab=99.87  E-value=5.2e-20  Score=159.71  Aligned_cols=248  Identities=11%  Similarity=0.097  Sum_probs=168.2

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhhCCC-CCcCCCCCCCCh-hhhh
Q psy1072           7 RYANIIFVVALYWCVSITTIFLNKTLLSELQLDAPIFVTWYQCLVSAIICFVLCQLSQQYPK-NFSFPYGNPFDT-NNMR   84 (324)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~K~~l~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~   84 (324)
                      .......+.++|+..+...    |. ..+  . +|..+.++|++++.+++.++...++++++ +.+.+   +.++ +++.
T Consensus         3 g~~~~i~a~~~wg~~~~~~----k~-~~~--~-~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~---~~~~~~~~~   71 (256)
T TIGR00688         3 GIIVSLLASFLFGYMYYYS----KL-LKP--L-PATDILGHRMIWSFPFMLLSVTLFRQWAALIERLK---RIQKRPLIL   71 (256)
T ss_pred             cHHHHHHHHHHHHHHHHHH----HH-hcc--C-CHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHh---CcccchHHH
Confidence            4456667888887777654    87 343  4 69999999999998887765543321100 00111   0112 2233


Q ss_pred             HHHHHHHHHHHHHHHhhhhccccchhHHHHHHHHHHHHHHHHHHHHhccccchhhHHHHHHHhhhceeeeeccCCCccch
Q psy1072          85 NLVPLTSCFILMLSFNNLCLKNVGVAFYYVSRSLTTVFNVILTYILLQEKTSHLAILSCFIIFSGFALGVNQEGVAGSFS  164 (324)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~p~~~~~~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~  164 (324)
                      .....+++......+.+.|+++++++.++++.++.|+++++++++++|||++++++.++.++++|+++...+++   +.+
T Consensus        72 ~~~~~g~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~~~~---~~~  148 (256)
T TIGR00688        72 SLLLCGLLIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIVLKG---SLP  148 (256)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHcC---Cch
Confidence            45666777788999999999999999999999999999999999999999999999999999999987654321   112


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHhhccCCCCceeeehhhhhhHHHHHHHHHHhh---cccccccccCCCcchhHHHHHHHH
Q psy1072         165 TLGTIYGVISSFAQALFSIHTKEVLPYVNDKIWLVSYYNNVYAVALFIPIIFI---CGEVSELANYPHLFSFYFWILLTI  241 (324)
Q Consensus       165 ~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~  241 (324)
                          .+++.+++++|.|.+..|+..++ +  ..+..     .+.....|....   .++.....   .......|..++.
T Consensus       149 ----~~~l~aa~~~a~~~i~~~~~~~~-~--~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~  213 (256)
T TIGR00688       149 ----WEALVLAFSFTAYGLIRKALKNT-D--LAGFC-----LETLSLMPVAIYYLLQTDFATVQ---QTNPFPIWLLLVL  213 (256)
T ss_pred             ----HHHHHHHHHHHHHHHHHhhcCCC-C--cchHH-----HHHHHHHHHHHHHHHHhccCccc---ccCchhHHHHHHH
Confidence                35788999999999999886432 1  12211     112222222211   11111110   0111123666667


Q ss_pred             HHHHHHHHHHHHHHHHhccCchhhhhhccchHHHHHHHHHHH
Q psy1072         242 GGVFGLTIGYVTSLQIQVTSPLTHNISGTAKASFHTVLATYW  283 (324)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~a~~~si~~~~~~v~~~~~~~~~  283 (324)
                      .|+.+.+.+......+|+.++.+.+...+++|+++.+++.+.
T Consensus       214 ~g~~t~i~~~l~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~  255 (256)
T TIGR00688       214 AGLITGTPLLAFVIAANRLPLNLLGLLQYIGPTIMMLCVSFL  255 (256)
T ss_pred             HHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence            777654444445577999999999999999999999999764

This uncharacterized protein is predicted to have many membrane-spanning domains.

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=99.87  E-value=6.5e-19  Score=155.42  Aligned_cols=272  Identities=19%  Similarity=0.211  Sum_probs=190.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhhCCCCCcCCCCCCCChhhhhHHHHHHHH
Q psy1072          13 FVVALYWCVSITTIFLNKTLLSELQLDAPIFVTWYQCLVSAIICFVLCQLSQQYPKNFSFPYGNPFDTNNMRNLVPLTSC   92 (324)
Q Consensus        13 ~~~~~~~~~~~~~~~~~K~~l~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (324)
                      .....|......    .|...+.  ..++......|...+..+.......++ . .  +.+    ..++.++..+..++.
T Consensus        14 ~~~~~~~~~~~~----~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~--~~~----~~~~~~~~~~~~~~~   79 (292)
T COG0697          14 LWGLLWGLSFIA----LKLAVES--LDPFLFAAALRFLIAALLLLPLLLLEP-R-G--LRP----ALRPWLLLLLLALLG   79 (292)
T ss_pred             HHHHHHHHHHHH----HHHHhcc--cCChHHHHHHHHHHHHHHHHHHHHhhc-c-c--ccc----cccchHHHHHHHHHH
Confidence            334455444443    3555443  235566666699888777333222211 0 0  111    111123445555566


Q ss_pred             HHHHHHHhhhhccccchhHHHHHHHHHHHHHHHHHH-HHhccccchhhHHHHHHHhhhceeeeeccCCCccchhhHHHHH
Q psy1072          93 FILMLSFNNLCLKNVGVAFYYVSRSLTTVFNVILTY-ILLQEKTSHLAILSCFIIFSGFALGVNQEGVAGSFSTLGTIYG  171 (324)
Q Consensus        93 ~~~~~~~~~~al~~~~~~~~~~l~~~~p~~~~~~~~-~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~G~~~~  171 (324)
                      ......+.+.++++++++.++.+.++.|+++.+++. +++|||++++++.++.+.++|+.+...++..+.+.+..|..++
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~~~~~~~g~~~~  159 (292)
T COG0697          80 LALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGGGGILSLLGLLLA  159 (292)
T ss_pred             HHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCcchhHHHHHHHHH
Confidence            778889999999999999999999999999999997 7779999999999999999999998876542211146899999


Q ss_pred             HHHHHHHHHHHHHHHhhccCCCCceeeehh-hhhhHHHHHHHHHHhhcccccccccCCCcchhHHHHHHHHHHHHHHHHH
Q psy1072         172 VISSFAQALFSIHTKEVLPYVNDKIWLVSY-YNNVYAVALFIPIIFICGEVSELANYPHLFSFYFWILLTIGGVFGLTIG  250 (324)
Q Consensus       172 l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (324)
                      +.+++++|++.+..|+..   +.++..... +...  ............+.+      ...+...+......++.+....
T Consensus       160 l~a~~~~a~~~~~~~~~~---~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~g~~~~~i~  228 (292)
T COG0697         160 LAAALLWALYTALVKRLS---RLGPVTLALLLQLL--LALLLLLLFFLSGFG------APILSRAWLLLLYLGVFSTGLA  228 (292)
T ss_pred             HHHHHHHHHHHHHHHHhc---CCChHHHHHHHHHH--HHHHHHHHHHhcccc------ccCCHHHHHHHHHHHHHHHHHH
Confidence            999999999999999886   233333433 3322  111111111111211      1233444667777888877644


Q ss_pred             HH-HHHHHhccCchhhhhhccchHHHHHHHHHHHhCCCcchhhHhHHHHHhhhhhheehh
Q psy1072         251 YV-TSLQIQVTSPLTHNISGTAKASFHTVLATYWYSEFKPLLWWISNGIILSGSATYALV  309 (324)
Q Consensus       251 ~~-~~~~~~~~~a~~~si~~~~~~v~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~~~  309 (324)
                      +. .+...++.++...+.....+|+.+.+++++++||+++..+++|+.+++.|+.+.+.+
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~  288 (292)
T COG0697         229 YLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR  288 (292)
T ss_pred             HHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence            44 456799999999999999999999999999999999999999999999999998765

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=99.86  E-value=2.6e-19  Score=146.56  Aligned_cols=257  Identities=14%  Similarity=0.098  Sum_probs=207.8

Q ss_pred             HHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhhCCCCCcCCCCCCCChhhhhHHHHHHHHHHHHHHHhhhhccccc
Q psy1072          29 NKTLLSELQLDAPIFVTWYQCLVSAIICFVLCQLSQQYPKNFSFPYGNPFDTNNMRNLVPLTSCFILMLSFNNLCLKNVG  108 (324)
Q Consensus        29 ~K~~l~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~  108 (324)
                      .|.++...   .|.-.++.|..++++++..+.+-.++           ++++++++.....|.+...++.+.|.+++.+|
T Consensus        31 Ak~LFP~v---G~~g~t~lRl~~aaLIll~l~RPwr~-----------r~~~~~~~~~~~yGvsLg~MNl~FY~si~riP   96 (292)
T COG5006          31 AKSLFPLV---GAAGVTALRLAIAALILLALFRPWRR-----------RLSKPQRLALLAYGVSLGGMNLLFYLSIERIP   96 (292)
T ss_pred             HHHHcccc---ChhhHHHHHHHHHHHHHHHHhhHHHh-----------ccChhhhHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            37787764   47788999999999999887765431           46778899999999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHhccccchhhHHHHHHHhhhceeeeeccCCCccchhhHHHHHHHHHHHHHHHHHHHHhh
Q psy1072         109 VAFYYVSRSLTTVFNVILTYILLQEKTSHLAILSCFIIFSGFALGVNQEGVAGSFSTLGTIYGVISSFAQALFSIHTKEV  188 (324)
Q Consensus       109 ~~~~~~l~~~~p~~~~~~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~G~~~~l~s~~~~a~~~v~~~~~  188 (324)
                      .+++..+-.+-|+.++.++.    +  +.++...+.+.+.|+.+.........+.|+.|..+++.++.||+.|.+..||.
T Consensus        97 lGiAVAiEF~GPL~vA~~~s----R--r~~d~vwvaLAvlGi~lL~p~~~~~~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~  170 (292)
T COG5006          97 LGIAVAIEFTGPLAVALLSS----R--RLRDFVWVALAVLGIWLLLPLGQSVWSLDPVGVALALGAGACWALYIVLGQRA  170 (292)
T ss_pred             chhhhhhhhccHHHHHHHhc----c--chhhHHHHHHHHHHHHhheeccCCcCcCCHHHHHHHHHHhHHHHHHHHHcchh
Confidence            99999999999999988774    2  34455666777888887654333345678899999999999999999999998


Q ss_pred             ccCCCCceeeehhhhhhHHHHHHHHHHhhcccccccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHH-HhccCchhhhh
Q psy1072         189 LPYVNDKIWLVSYYNNVYAVALFIPIIFICGEVSELANYPHLFSFYFWILLTIGGVFGLTIGYVTSLQ-IQVTSPLTHNI  267 (324)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~a~~~si  267 (324)
                      -+  ..+..+.....+..++++.+|+.....+       +...++.....-+..++++..+.|+.-+. +++.++-+.++
T Consensus       171 g~--~~~g~~g~a~gm~vAaviv~Pig~~~ag-------~~l~~p~ll~laLgvavlSSalPYsLEmiAL~rlp~~~F~~  241 (292)
T COG5006         171 GR--AEHGTAGVAVGMLVAALIVLPIGAAQAG-------PALFSPSLLPLALGVAVLSSALPYSLEMIALRRLPARTFGT  241 (292)
T ss_pred             cc--cCCCchHHHHHHHHHHHHHhhhhhhhcc-------hhhcChHHHHHHHHHHHHhcccchHHHHHHHhhCChhHHHH
Confidence            64  2334455666677888888888765321       12345666777788888999999987655 99999999999


Q ss_pred             hccchHHHHHHHHHHHhCCCcchhhHhHHHHHhhhhhheehhccccc
Q psy1072         268 SGTAKASFHTVLATYWYSEFKPLLWWISNGIILSGSATYALVKKKEL  314 (324)
Q Consensus       268 ~~~~~~v~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~~~~~~~~  314 (324)
                      ...+||.++...|++++||++|+.||+|+..++.++.-.+...+|+.
T Consensus       242 LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~~lt~~~~~  288 (292)
T COG5006         242 LLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGSTLTARKPA  288 (292)
T ss_pred             HHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhccccccCCCC
Confidence            99999999999999999999999999999999999887666544443

>KOG2765|consensus

Probab=99.81  E-value=1.4e-18  Score=149.86  Aligned_cols=218  Identities=16%  Similarity=0.198  Sum_probs=171.0

Q ss_pred             HHHHHHhhhhccccchhHHHHHHHHHHHHHHHHHHHHhccccchhhHHHHHHHhhhceeeeeccCC-----CccchhhHH
Q psy1072          94 ILMLSFNNLCLKNVGVAFYYVSRSLTTVFNVILTYILLQEKTSHLAILSCFIIFSGFALGVNQEGV-----AGSFSTLGT  168 (324)
Q Consensus        94 ~~~~~~~~~al~~~~~~~~~~l~~~~p~~~~~~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~~-----~~~~~~~G~  168 (324)
                      +..+++.|.|+.|++++..+++.+++-+|+..++.++.+||+++.|.+++.+.+.|+++++-+++.     ..+.+..|.
T Consensus       170 F~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~~~~~~a~~~llG~  249 (416)
T KOG2765|consen  170 FLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQNSDLPASRPLLGN  249 (416)
T ss_pred             HHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccccccccCCccchhHHH
Confidence            478888999999999999999999999999999999999999999999999999999998755431     223457899


Q ss_pred             HHHHHHHHHHHHHHHHHHhhccCCC-Cceeeeh-hhhhhHHHHHHHHHHhhcccccccccCCCcchhHHHHHHHHHHHHH
Q psy1072         169 IYGVISSFAQALFSIHTKEVLPYVN-DKIWLVS-YYNNVYAVALFIPIIFICGEVSELANYPHLFSFYFWILLTIGGVFG  246 (324)
Q Consensus       169 ~~~l~s~~~~a~~~v~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (324)
                      ++++++++.||+|.++.||...+++ .-.+++. .|..++..++++|...+. +......++.+.+..+-. +++.+.++
T Consensus       250 llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL-~~~~~e~F~lP~~~q~~~-vv~~~lig  327 (416)
T KOG2765|consen  250 LLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIIL-DFFGEERFELPSSTQFSL-VVFNNLIG  327 (416)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHH-HHhccCcccCCCCceeEe-eeHhhHHH
Confidence            9999999999999999999888763 2223333 366777777888766654 222222333333333333 33444555


Q ss_pred             HH-HHHHHHHHHhccCchhhhhhccchHHHHHHHHHHHhCCCcchhhHhHHHHHhhhhhheehhcccc
Q psy1072         247 LT-IGYVTSLQIQVTSPLTHNISGTAKASFHTVLATYWYSEFKPLLWWISNGIILSGSATYALVKKKE  313 (324)
Q Consensus       247 ~~-~~~~~~~~~~~~~a~~~si~~~~~~v~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~~~~~~~  313 (324)
                      ++ --|...++.-.++|+++.+-..+....+++...++-|.++|+.+++|...++.|.+..+...+..
T Consensus       328 tvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~~~~~~  395 (416)
T KOG2765|consen  328 TVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNISSENS  395 (416)
T ss_pred             HHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheecccccc
Confidence            54 45666677889999999988899999999999999899999999999999999999998865543

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=99.81  E-value=2e-17  Score=145.51  Aligned_cols=265  Identities=12%  Similarity=0.061  Sum_probs=188.5

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhhCCCCCcCCCCCCCChhhhhHHHH
Q psy1072           9 ANIIFVVALYWCVSITTIFLNKTLLSELQLDAPIFVTWYQCLVSAIICFVLCQLSQQYPKNFSFPYGNPFDTNNMRNLVP   88 (324)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~K~~l~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (324)
                      .....++++|+..+...    |...   +++++.. .  |..++.+++..+....+ .      |+  +.+++.+..-..
T Consensus         4 l~~lia~~~wGs~g~~~----k~~~---g~~~~~~-~--~~~~g~l~~~~~~~~~~-~------~~--~~~~~~~~~g~l   64 (290)
T TIGR00776         4 LIALIPALFWGSFVLIN----VKIG---GGPYSQT-L--GTTFGALILSIAIAIFV-L------PE--FWALSIFLVGLL   64 (290)
T ss_pred             HHHHHHHHHHhhhHHHH----hccC---CCHHHHH-H--HHHHHHHHHHHHHHHHh-C------Cc--ccccHHHHHHHH
Confidence            45567888898888764    5443   4544333 2  67777776666554432 1      11  011222333333


Q ss_pred             HHHHHHHHHHHhhhhccccchhHHHHHHH-HHHHHHHHHHHHHhccccchhh----HHHHHHHhhhceeeeeccCCCcc-
Q psy1072          89 LTSCFILMLSFNNLCLKNVGVAFYYVSRS-LTTVFNVILTYILLQEKTSHLA----ILSCFIIFSGFALGVNQEGVAGS-  162 (324)
Q Consensus        89 ~~~~~~~~~~~~~~al~~~~~~~~~~l~~-~~p~~~~~~~~~~~~e~~~~~~----~~~~~l~~~Gv~l~~~~~~~~~~-  162 (324)
                      .|+.....+.+.+.+.++++++.+..+.+ +.+++..+.+.+++|||.++++    ..++++.++|+++....+.++.+ 
T Consensus        65 ~G~~w~ig~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~~~~~~~  144 (290)
T TIGR00776        65 SGAFWALGQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRSKDKSAGI  144 (290)
T ss_pred             HHHHHHhhhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEecccccccc
Confidence            44446677799999999999999999988 8889999999999999999999    99999999999987644332111 


Q ss_pred             ---ch-hhHHHHHHHHHHHHHHHHHHHHhhccCCCCceeeehhhhhh----HHHHHHHHHHhhcccccccccCCCcchhH
Q psy1072         163 ---FS-TLGTIYGVISSFAQALFSIHTKEVLPYVNDKIWLVSYYNNV----YAVALFIPIIFICGEVSELANYPHLFSFY  234 (324)
Q Consensus       163 ---~~-~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~  234 (324)
                         .+ ..|.+++++|+++|+.|.+..|+.    +.++.+..+.+..    .+.++..+.  .  +.++      . .+.
T Consensus       145 ~~~~~~~~Gi~~~l~sg~~y~~~~~~~~~~----~~~~~~~~~~~~~g~~~~~~~~~~~~--~--~~~~------~-~~~  209 (290)
T TIGR00776       145 KSEFNFKKGILLLLMSTIGYLVYVVVAKAF----GVDGLSVLLPQAIGMVIGGIIFNLGH--I--LAKP------L-KKY  209 (290)
T ss_pred             ccccchhhHHHHHHHHHHHHHHHHHHHHHc----CCCcceehhHHHHHHHHHHHHHHHHH--h--cccc------h-HHH
Confidence               33 689999999999999999999976    3567777444433    333333333  1  1101      1 122


Q ss_pred             HHHHHHHHHHHHHHHHHHHH-HHHh-ccCchhhhhhccchHHHHHHHHHHHhCCCcchhhH----hHHHHHhhhhhheeh
Q psy1072         235 FWILLTIGGVFGLTIGYVTS-LQIQ-VTSPLTHNISGTAKASFHTVLATYWYSEFKPLLWW----ISNGIILSGSATYAL  308 (324)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~-~~~~-~~~a~~~si~~~~~~v~~~~~~~~~~~e~~~~~~~----~G~~li~~g~~~~~~  308 (324)
                      .+......|++ +...+..| ...+ +.++.++++..+.+|+.+.+.+++++||+.++.++    +|.++++.|+.+...
T Consensus       210 ~~~~~~~~Gi~-~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~~  288 (290)
T TIGR00776       210 AILLNILPGLM-WGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILGI  288 (290)
T ss_pred             HHHHHHHHHHH-HHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHhc
Confidence            23334447888 56666555 5577 99999999999999999999999999999999999    999999999887543

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>KOG2234|consensus

Probab=99.81  E-value=2.3e-17  Score=142.62  Aligned_cols=285  Identities=14%  Similarity=0.233  Sum_probs=206.8

Q ss_pred             HHHHHHHHHHHhcC--CCCchHHHHHHHHHHHHHHHHHHHHHhh-h--CCCCCcCCCCCCCChhhhhHHHHHHHHHHHHH
Q psy1072          23 ITTIFLNKTLLSEL--QLDAPIFVTWYQCLVSAIICFVLCQLSQ-Q--YPKNFSFPYGNPFDTNNMRNLVPLTSCFILML   97 (324)
Q Consensus        23 ~~~~~~~K~~l~~~--~~~~p~~l~~~r~~~~~~~l~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   97 (324)
                      ....+..|+.-...  .| .|.+..+.-=+.-.+++........ .  ++...++++.....+++..++...+++|.+++
T Consensus        28 ~~l~l~l~ys~~~~~~~f-~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk~~vPa~iYalqN  106 (345)
T KOG2234|consen   28 TALTLLLRYSRTREKPMF-LPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLKVSVPALIYALQN  106 (345)
T ss_pred             hhHHHHHHHHhcCCCCCc-chhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHHHHHHHHHHHHhh
Confidence            44445556665542  24 3455554444444455554443331 1  11111233223334446677788889999999


Q ss_pred             HHhhhhccccchhHHHHHHHHHHHHHHHHHHHHhccccchhhHHHHHHHhhhceeeeecc---C-----CCccchhhHHH
Q psy1072          98 SFNNLCLKNVGVAFYYVSRSLTTVFNVILTYILLQEKTSHLAILSCFIIFSGFALGVNQE---G-----VAGSFSTLGTI  169 (324)
Q Consensus        98 ~~~~~al~~~~~~~~~~l~~~~p~~~~~~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~---~-----~~~~~~~~G~~  169 (324)
                      .+.+.++.+.+++++++...+..+.++++..++++||.++++|.++++...|+.+...+.   .     ...+.++.|..
T Consensus       107 nl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~~~~a~~~~~~~n~~~G~~  186 (345)
T KOG2234|consen  107 NLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLSPTGAKSESSAQNPFLGLV  186 (345)
T ss_pred             hHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCCCCCccCCCcccchhhhHH
Confidence            999999999999999999999999999999999999999999999999999999865221   1     12345789999


Q ss_pred             HHHHHHHHHHHHHHHHHhhccCCCCceeeehhhhhhHHHHHHHHHHhhcccccccc--cCCCcchhHHHHHHHHHHHHHH
Q psy1072         170 YGVISSFAQALFSIHTKEVLPYVNDKIWLVSYYNNVYAVALFIPIIFICGEVSELA--NYPHLFSFYFWILLTIGGVFGL  247 (324)
Q Consensus       170 ~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~  247 (324)
                      ..+.++...++..+|.+|++|+.+.+-|-...-...+|.++.+...... |.....  .+....+...|..++..++.|.
T Consensus       187 avl~~c~~SgfAgvYfEkiLK~s~~s~wi~NiqL~~~g~~f~~l~~~~~-d~~~i~~~gff~G~s~~vw~vVl~~a~gGL  265 (345)
T KOG2234|consen  187 AVLVACFLSGFAGVYFEKILKGSNVSLWIRNIQLYFFGILFNLLTILLQ-DGEAINEYGFFYGYSSIVWLVVLLNAVGGL  265 (345)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhc-cccccccCCccccccHHHHHHHHHHhccch
Confidence            9999999999999999999998775544433333445555554444443 444432  2233456666777788877777


Q ss_pred             HHHHHHHHHHhccCchhhhhhccchHHHHHHHHHHHhCCCcchhhHhHHHHHhhhhhheehhcccc
Q psy1072         248 TIGYVTSLQIQVTSPLTHNISGTAKASFHTVLATYWYSEFKPLLWWISNGIILSGSATYALVKKKE  313 (324)
Q Consensus       248 ~~~~~~~~~~~~~~a~~~si~~~~~~v~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~~~~~~~  313 (324)
                      .++..    +|+.|...-.....+..+++.+.++.++|.++|....+|..+++.++.+|+..+.++
T Consensus       266 lvs~v----~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~~lVi~Si~lY~~~P~~~  327 (345)
T KOG2234|consen  266 LVSLV----MKYADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLGALLVILSIFLYSLYPARD  327 (345)
T ss_pred             hHHHH----HHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHHHHHHHhhcCCccc
Confidence            76654    688888888888888999999999999999999999999999999999999766654

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=99.80  E-value=5.2e-18  Score=144.62  Aligned_cols=215  Identities=13%  Similarity=0.285  Sum_probs=169.9

Q ss_pred             ChhhhhHHHHHHHHHHHHHHHhhhhccccchhHHHHHHHHHHHHHHHHHHHHhccccchhhHHHHHHHhhhceeeeeccC
Q psy1072          79 DTNNMRNLVPLTSCFILMLSFNNLCLKNVGVAFYYVSRSLTTVFNVILTYILLQEKTSHLAILSCFIIFSGFALGVNQEG  158 (324)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~p~~~~~~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~  158 (324)
                      ++++..++..++++|...+.+.+.++++++++++++++++..+++++++++++|+|.+++||.++.+.++|+++...++.
T Consensus        13 ~~~~~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~   92 (244)
T PF04142_consen   13 SPKDTLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSS   92 (244)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCc
Confidence            45667788888999999999999999999999999999999999999999999999999999999999999998653321


Q ss_pred             CC--------------ccchhhHHHHHHHHHHHHHHHHHHHHhhccCCCCceeeehhhhhhHHHHHHHHHHhhccccccc
Q psy1072         159 VA--------------GSFSTLGTIYGVISSFAQALFSIHTKEVLPYVNDKIWLVSYYNNVYAVALFIPIIFICGEVSEL  224 (324)
Q Consensus       159 ~~--------------~~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  224 (324)
                      .+              .+....|.++.+.++++.++..++.||++|+.+.+.+.........+.++.++..... |..+.
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~gi~~~~~~~~~~-~~~~~  171 (244)
T PF04142_consen   93 QSSDNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFGILFNLLALLLS-DGSAI  171 (244)
T ss_pred             cccccccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHhcc-ccccc
Confidence            10              1234689999999999999999999999998776655555555566666666554443 33333


Q ss_pred             ccC--CCcchhHHHHHHHHHHHHHHHHHHHHHHHHhccCchhhhhhccchHHHHHHHHHHHhCCCcchhhHhHHHH
Q psy1072         225 ANY--PHLFSFYFWILLTIGGVFGLTIGYVTSLQIQVTSPLTHNISGTAKASFHTVLATYWYSEFKPLLWWISNGI  298 (324)
Q Consensus       225 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~si~~~~~~v~~~~~~~~~~~e~~~~~~~~G~~l  298 (324)
                      .+.  ....+...|..+....+.|..+++    .+|+.|...-+....+..+.+.+.++.+||.++|....+|..+
T Consensus       172 ~~~g~f~G~~~~~~~~i~~~a~gGllva~----v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~lg~~~  243 (244)
T PF04142_consen  172 SESGFFHGYSWWVWIVIFLQAIGGLLVAF----VLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLLGAAL  243 (244)
T ss_pred             ccCCchhhcchHHHHHHHHHHHhhHHHHH----HHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhhheec
Confidence            221  122344445555555555555443    5799999999999999999999999999999999999999865

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>KOG1583|consensus

Probab=99.80  E-value=3.6e-19  Score=147.32  Aligned_cols=260  Identities=16%  Similarity=0.195  Sum_probs=203.9

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHhhhCCCCCcCCCCCCCChhhhhHHHHHHHHHHHHHHHhhhhccc-cchhHHHHHHHH
Q psy1072          40 APIFVTWYQCLVSAIICFVLCQLSQQYPKNFSFPYGNPFDTNNMRNLVPLTSCFILMLSFNNLCLKN-VGVAFYYVSRSL  118 (324)
Q Consensus        40 ~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~-~~~~~~~~l~~~  118 (324)
                      .-..+++.|+++.+.--+++.  .+..    ..|     ++-..|.+...-..++..+.++|.++++ +|.+...++|+.
T Consensus        32 sgNLITFaqFlFia~eGlif~--skf~----~~k-----~kiplk~Y~i~V~mFF~vnv~NN~al~f~I~~PlHiIfRsg  100 (330)
T KOG1583|consen   32 SGNLITFAQFLFIATEGLIFT--SKFF----TVK-----PKIPLKDYAITVAMFFIVNVTNNYALKFNIPMPLHIIFRSG  100 (330)
T ss_pred             CeeehHHHHHHHHHHhceeee--cccc----ccC-----CCCchhhhheehheeeeeeeeccceeeecccceEEEEEecC
Confidence            445788889887776665543  1111    111     2223667777777788888999999998 799999999999


Q ss_pred             HHHHHHHHHHHHhccccchhhHHHHHHHhhhceeeeeccCCCc--------------cch--hhHHHHHHHHHHHHHHHH
Q psy1072         119 TTVFNVILTYILLQEKTSHLAILSCFIIFSGFALGVNQEGVAG--------------SFS--TLGTIYGVISSFAQALFS  182 (324)
Q Consensus       119 ~p~~~~~~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~--------------~~~--~~G~~~~l~s~~~~a~~~  182 (324)
                      +++.++..++++.|+|.+.+|+.++++..+|+++.+..+..|.              +..  ..|+.+..++.+..|...
T Consensus       101 sll~nM~~g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~~~~~~~l~~~~~~~~~~~w~iGi~lL~~al~~sa~mg  180 (330)
T KOG1583|consen  101 SLLANMILGWILLGKRYSLRQYSSVLMITIGIIICTLFSSKDGRSKLSGLDSGSAQSDFFWWLIGIALLVFALLLSAYMG  180 (330)
T ss_pred             cHHHHHHHHHHhccceeehhhhhhHHhhhhhheeEEeecCcchhhhhcccccCcccccchHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999998654332111              111  358888889999999999


Q ss_pred             HHHHhhccCCCCceeeehhhhhhHHHHHHHHHHhhccccccc----cc-------CCCcchhHHHHHHHHHHHHHHHHHH
Q psy1072         183 IHTKEVLPYVNDKIWLVSYYNNVYAVALFIPIIFICGEVSEL----AN-------YPHLFSFYFWILLTIGGVFGLTIGY  251 (324)
Q Consensus       183 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~----~~-------~~~~~~~~~~~~~~~~~~~~~~~~~  251 (324)
                      ++++...++++.++-|..+|+...+...++...   +|..+.    ..       .....-|..|..++..++..++.--
T Consensus       181 iyqE~~Y~kyGKh~~EalFytH~LsLP~Flf~~---~div~~~~~~~~se~~~~p~~g~~vP~~~~yLl~n~L~Qy~Cik  257 (330)
T KOG1583|consen  181 IYQETTYQKYGKHWKEALFYTHFLSLPLFLFMG---DDIVSHWRLAFKSESYLIPLLGFKVPSMWVYLLFNVLTQYFCIK  257 (330)
T ss_pred             HHHHHHHHHhcCChHHHHHHHHHhccchHHHhc---chHHHHHHHHhcCcceeccccCccccHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999988866555321   121111    11       1112256778888888888888777


Q ss_pred             HHHHHHhccCchhhhhhccchHHHHHHHHHHHhCCCcchhhHhHHHHHhhhhhheehhcccc
Q psy1072         252 VTSLQIQVTSPLTHNISGTAKASFHTVLATYWYSEFKPLLWWISNGIILSGSATYALVKKKE  313 (324)
Q Consensus       252 ~~~~~~~~~~a~~~si~~~~~~v~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~~~~~~~  313 (324)
                      ..+....++++.+++++-++|+.++.++|++.|+.++++..|+|..+++.|.++|+....+.
T Consensus       258 gVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa~~~~~~  319 (330)
T KOG1583|consen  258 GVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFANVWNHP  319 (330)
T ss_pred             hhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHHHHHcCc
Confidence            77777889999999999999999999999999999999999999999999999998654443

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=99.79  E-value=6.2e-17  Score=136.21  Aligned_cols=284  Identities=12%  Similarity=0.071  Sum_probs=200.8

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhhCCCCCcCCCCCCCChhhhhHHH
Q psy1072           8 YANIIFVVALYWCVSITTIFLNKTLLSELQLDAPIFVTWYQCLVSAIICFVLCQLSQQYPKNFSFPYGNPFDTNNMRNLV   87 (324)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~K~~l~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (324)
                      .....++-++|+....    ..|.+-..    ++..+...|.+.+..++.......|+.+.   +.+ ...+++.+....
T Consensus         9 il~~l~Ay~lwG~lp~----y~kll~~~----~~~eIlahRviwS~~~~l~ll~~~r~~~~---~~~-~~~~p~~~~~~~   76 (293)
T COG2962           9 ILLALLAYLLWGLLPL----YFKLLEPL----PATEILAHRVIWSFPFMLALLFLLRQWRE---LKQ-LLKQPKTLLMLA   76 (293)
T ss_pred             hHHHHHHHHHHHHHHH----HHHHHccC----CHHHHHHHHHHHHHHHHHHHHHHHhhhHH---HHH-HHhCcHHHHHHH
Confidence            3445566677765544    44766432    68899999999999988888776553321   111 112223333344


Q ss_pred             HHHHHHHHHHHHhhhhccccchhHHHHHHHHHHHHHHHHHHHHhccccchhhHHHHHHHhhhceeeeeccCCCccchhhH
Q psy1072          88 PLTSCFILMLSFNNLCLKNVGVAFYYVSRSLTTVFNVILTYILLQEKTSHLAILSCFIIFSGFALGVNQEGVAGSFSTLG  167 (324)
Q Consensus        88 ~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~p~~~~~~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~G  167 (324)
                      ..+..-..+.....+|.+....-.+++--...|++..+++.+++|||+++.||+++.++.+|+..-....   ++.++..
T Consensus        77 l~a~li~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~---g~lpwva  153 (293)
T COG2962          77 LTALLIGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLL---GSLPWVA  153 (293)
T ss_pred             HHHHHHHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHc---CCCcHHH
Confidence            4445556777788889999999999999999999999999999999999999999999999998865432   3566654


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhccCCCCceeeehhhhhhHHHHHHHHHHhhcccccccccCCCcchhHHHHHHHHHHHHHH
Q psy1072         168 TIYGVISSFAQALFSIHTKEVLPYVNDKIWLVSYYNNVYAVALFIPIIFICGEVSELANYPHLFSFYFWILLTIGGVFGL  247 (324)
Q Consensus       168 ~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (324)
                      ..    =+++|++|...-|+.    +.++.+-.....+.-.+..+.+....+|.++..   .......+.++...|..+.
T Consensus       154 l~----la~sf~~Ygl~RK~~----~v~a~~g~~lE~l~l~p~al~yl~~l~~~~~~~---~~~~~~~~~LLv~aG~vTa  222 (293)
T COG2962         154 LA----LALSFGLYGLLRKKL----KVDALTGLTLETLLLLPVALIYLLFLADSGQFL---QQNANSLWLLLVLAGLVTA  222 (293)
T ss_pred             HH----HHHHHHHHHHHHHhc----CCchHHhHHHHHHHHhHHHHHHHHHHhcCchhh---hcCCchHHHHHHHhhHHHH
Confidence            44    457889999766655    444444444444444444444444443433311   1123444667777777755


Q ss_pred             HHHHHHHHHHhccCchhhhhhccchHHHHHHHHHHHhCCCcchhhHhHHHHHhhhhhheehhcccccchh
Q psy1072         248 TIGYVTSLQIQVTSPLTHNISGTAKASFHTVLATYWYSEFKPLLWWISNGIILSGSATYALVKKKELDRR  317 (324)
Q Consensus       248 ~~~~~~~~~~~~~~a~~~si~~~~~~v~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~~~~~~~~~~~  317 (324)
                      +--.......|+.+-.+.++.++.+|....+++++++||+++..+....+.+.+|..+|..+..++.+++
T Consensus       223 vpL~lf~~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~l~~~d~l~~~r~~  292 (293)
T COG2962         223 VPLLLFAAAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALALFSIDGLYTARKK  292 (293)
T ss_pred             HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            4433333558999999999999999999999999999999999999999999999999998877655543

>KOG4510|consensus

Probab=99.78  E-value=1.2e-19  Score=149.35  Aligned_cols=281  Identities=16%  Similarity=0.175  Sum_probs=204.0

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhhCCCCCcCCCCCCCChhhhhHHH
Q psy1072           8 YANIIFVVALYWCVSITTIFLNKTLLSELQLDAPIFVTWYQCLVSAIICFVLCQLSQQYPKNFSFPYGNPFDTNNMRNLV   87 (324)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~K~~l~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (324)
                      +.-+.+..+- ..++.++.+..|.. ++    -|......|++.-.++..+.... ++++  .--|      ....+.++
T Consensus        37 ~~gl~l~~vs-~ff~~~~vv~t~~~-e~----~p~e~a~~r~l~~mlit~pcliy-~~~~--v~gp------~g~R~~Li  101 (346)
T KOG4510|consen   37 NLGLLLLTVS-YFFNSCMVVSTKVL-EN----DPMELASFRLLVRMLITYPCLIY-YMQP--VIGP------EGKRKWLI  101 (346)
T ss_pred             ccCceehhhH-HHHhhHHHhhhhhh-cc----ChhHhhhhhhhhehhhhheEEEE-Eeee--eecC------CCcEEEEE
Confidence            3333444444 44555555555544 43    37777777755544443332221 2111  0011      12234556


Q ss_pred             HHHHHHHHHHHHhhhhccccchhHHHHHHHHHHHHHHHHHHHHhccccchhhHHHHHHHhhhceeeeeccC---------
Q psy1072          88 PLTSCFILMLSFNNLCLKNVGVAFYYVSRSLTTVFNVILTYILLQEKTSHLAILSCFIIFSGFALGVNQEG---------  158 (324)
Q Consensus        88 ~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~p~~~~~~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~---------  158 (324)
                      ..++.+..+....++|++|+|.+-+.++..++|.++.++++.++|||.++.+.++..+.+.|+++++.+..         
T Consensus       102 LRg~mG~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG~~t~g~  181 (346)
T KOG4510|consen  102 LRGFMGFTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFLFGDTTEGE  181 (346)
T ss_pred             eehhhhhhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcccCCCcccc
Confidence            66788888888999999999999999999999999999999999999999999999999999999876531         


Q ss_pred             --CCccchhhHHHHHHHHHHHHHHHHHHHHhhccCCCCceeeehhhhhhHHHHHHHHHHhhcccccccccCCCcchhHHH
Q psy1072         159 --VAGSFSTLGTIYGVISSFAQALFSIHTKEVLPYVNDKIWLVSYYNNVYAVALFIPIIFICGEVSELANYPHLFSFYFW  236 (324)
Q Consensus       159 --~~~~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~  236 (324)
                        .+.+.+..|.+.++.++++-|.-.++.|++-|+.|  ......|....+.+.........|+...    |+  ....|
T Consensus       182 ~~s~~~~~~~gt~aai~s~lf~asvyIilR~iGk~~h--~~msvsyf~~i~lV~s~I~~~~ig~~~l----P~--cgkdr  253 (346)
T KOG4510|consen  182 DSSQVEYDIPGTVAAISSVLFGASVYIILRYIGKNAH--AIMSVSYFSLITLVVSLIGCASIGAVQL----PH--CGKDR  253 (346)
T ss_pred             ccccccccCCchHHHHHhHhhhhhHHHHHHHhhcccc--EEEEehHHHHHHHHHHHHHHhhccceec----Cc--cccce
Confidence              11234567899999999999999999998866543  3444445555665555555555444322    22  22236


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhccCchhhhhhccchHHHHHHHHHHHhCCCcchhhHhHHHHHhhhhhheehhcc
Q psy1072         237 ILLTIGGVFGLTIGYVTSLQIQVTSPLTHNISGTAKASFHTVLATYWYSEFKPLLWWISNGIILSGSATYALVKK  311 (324)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~si~~~~~~v~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~~~~~  311 (324)
                      ++++..|+.+++.+....+.+|+-.|...++..+..-+++.++.+++|||.+|++.|+|+++++.+..+....|.
T Consensus       254 ~l~~~lGvfgfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~a~~kw  328 (346)
T KOG4510|consen  254 WLFVNLGVFGFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWVALKKW  328 (346)
T ss_pred             EEEEEehhhhhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHHHHHHH
Confidence            677888999999999988888888888889999999999999999999999999999999999999888766544

>KOG1582|consensus

Probab=99.78  E-value=1.9e-17  Score=136.78  Aligned_cols=271  Identities=12%  Similarity=0.076  Sum_probs=219.2

Q ss_pred             HHHHHhcCCCC-chHHHHHHHHHHHHHHHHHHHHHhhhCCCCCcCCCCCCCChhhhhHHHHHHHHHHHHHHHhhhhcccc
Q psy1072          29 NKTLLSELQLD-APIFVTWYQCLVSAIICFVLCQLSQQYPKNFSFPYGNPFDTNNMRNLVPLTSCFILMLSFNNLCLKNV  107 (324)
Q Consensus        29 ~K~~l~~~~~~-~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~  107 (324)
                      ..++++.-||. ..+.+++.|+++=..+..+.+...+  +++...|         ||.+..++....+.+.+.|-++.|.
T Consensus        62 qElif~~~gfkp~GWylTlvQf~~Ysg~glie~~~~~--~k~r~iP---------~rtY~~la~~t~gtmGLsn~SlgYL  130 (367)
T KOG1582|consen   62 QELIFNVEGFKPFGWYLTLVQFLVYSGFGLIELQLIQ--TKRRVIP---------WRTYVILAFLTVGTMGLSNGSLGYL  130 (367)
T ss_pred             HHHHhccccCcccchHHHHHHHHHHHhhhheEEEeec--ccceecc---------hhHhhhhHhhhhhccccCcCccccc
Confidence            35555555775 5678888888876666555443322  2222333         8899999999999999999999999


Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHhccccchhhHHHHHHHhhhceeeeeccC-CCccchhhHHHHHHHHHHHHHHHHHHHH
Q psy1072         108 GVAFYYVSRSLTTVFNVILTYILLQEKTSHLAILSCFIIFSGFALGVNQEG-VAGSFSTLGTIYGVISSFAQALFSIHTK  186 (324)
Q Consensus       108 ~~~~~~~l~~~~p~~~~~~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~-~~~~~~~~G~~~~l~s~~~~a~~~v~~~  186 (324)
                      +-+.-.+.+.|..+-+++.+.++-++|..+.++.+..+..+|++..+..|+ ...++|..|+.+.-++-++.|.-...++
T Consensus       131 NYPtQviFKccKliPVmiggifIqGkRY~v~d~~aA~lm~lGli~FTLADs~~sPNF~~~Gv~mIsgALl~DA~iGNvQE  210 (367)
T KOG1582|consen  131 NYPTQVIFKCCKLIPVMIGGIFIQGKRYGVHDYIAAMLMSLGLIWFTLADSQTSPNFNLIGVMMISGALLADAVIGNVQE  210 (367)
T ss_pred             cCcHHHHHHhhhhhhhhheeeeeccccccHHHHHHHHHHHHHHHhhhhcccccCCCcceeeHHHHHHHHHHHHHhhHHHH
Confidence            999999999999999999999999999999999999999999999776554 3456788999999999999999999999


Q ss_pred             hhccCCCCceeeehhhhhhHHHHHHHHHHhhcccccccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhccCchhhh
Q psy1072         187 EVLPYVNDKIWLVSYYNNVYAVALFIPIIFICGEVSELANYPHLFSFYFWILLTIGGVFGLTIGYVTSLQIQVTSPLTHN  266 (324)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~s  266 (324)
                      +.++.++.+..++.+|....+.+.+......+||....+.+-...........++-...+++........++-.+|.++.
T Consensus       211 k~m~~~~~ss~EmvfySy~iG~vflf~~mvlTge~f~a~~fcaehp~~tyGy~~~~s~~gylG~~~VLalI~~fGA~~aa  290 (367)
T KOG1582|consen  211 KAMKMNPASSSEMVFYSYGIGFVFLFAPMVLTGELFSAWTFCAEHPVRTYGYAFLFSLAGYLGIVFVLALIKLFGALIAA  290 (367)
T ss_pred             HHHhhCCCCcceEEEeeecccHHHHHHHHHhcccchhhhHHHHhCcHhHHHHHHHHHHHhHhhHHHHHHHHHHhchhHHH
Confidence            99999888889999999999999999888888998776654222222223333344444444444444568999999999


Q ss_pred             hhccchHHHHHHHHHHHhCCCcchhhHhHHHHHhhhhhheehhc
Q psy1072         267 ISGTAKASFHTVLATYWYSEFKPLLWWISNGIILSGSATYALVK  310 (324)
Q Consensus       267 i~~~~~~v~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~~~~  310 (324)
                      .+...++..++++|+++|..++|.+..-|..+++.|+++--+.+
T Consensus       291 tvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk  334 (367)
T KOG1582|consen  291 TVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSK  334 (367)
T ss_pred             HHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccC
Confidence            99999999999999999999999999999999999999876655

>KOG3912|consensus

Probab=99.73  E-value=4.8e-16  Score=129.15  Aligned_cols=293  Identities=13%  Similarity=0.033  Sum_probs=206.3

Q ss_pred             HHHHHHHHHHHHHHHHHHhc-----CCCCchHHHHHHHHHHHHHHHHHHHHHhhhCCCC---CcCCCCCCCCh--hhhhH
Q psy1072          16 ALYWCVSITTIFLNKTLLSE-----LQLDAPIFVTWYQCLVSAIICFVLCQLSQQYPKN---FSFPYGNPFDT--NNMRN   85 (324)
Q Consensus        16 ~~~~~~~~~~~~~~K~~l~~-----~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~---~~~~~~~~~~~--~~~~~   85 (324)
                      .....++...++..||.=+.     -+|+.|+..+..-++--..++..+...+++...+   .++.+..+.++  -+.+.
T Consensus         9 ~imvvsGs~Ntl~aKwadsi~~eg~pgfqhpvlqal~mFlGEflCl~vf~lir~~sn~~g~~s~~~~ilsq~~~pf~p~l   88 (372)
T KOG3912|consen    9 LIMVVSGSFNTLVAKWADSIQAEGSPGFQHPVLQALLMFLGEFLCLAVFKLIRLRSNGQGVSSDLDSILSQDSSPFNPVL   88 (372)
T ss_pred             hhhhhhccHHHHHHHHHHhhhhhCCCccccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccccccCCCCcce
Confidence            34445666777788988543     2477787776655544445555554444321110   00110011111  12345


Q ss_pred             HHHHHHHHHHHHHHhhhhccccchhHHHHHHHHHHHHHHHHHHHHhccccchhhHHHHHHHhhhceeeeeccC-------
Q psy1072          86 LVPLTSCFILMLSFNNLCLKNVGVAFYYVSRSLTTVFNVILTYILLQEKTSHLAILSCFIIFSGFALGVNQEG-------  158 (324)
Q Consensus        86 ~~~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~p~~~~~~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~-------  158 (324)
                      +++.++|-..+..+-|.++.+++++.+|.++....+|+.+++..++|++++.++|+++....+|++++...+.       
T Consensus        89 fl~Pal~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~d~~~~~~p~  168 (372)
T KOG3912|consen   89 FLPPALCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSLDVHLVTDPY  168 (372)
T ss_pred             ecChHHHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeeeecccccCCc
Confidence            6778999998889999999999999999999999999999999999999999999999999999998654321       


Q ss_pred             CCccchhhHHHHHHHHHHHHHHHHHHHHhhccCCCCceeeehhhhhhHHHHHHHHHHhhccccccc--c-cCCC--c---
Q psy1072         159 VAGSFSTLGTIYGVISSFAQALFSIHTKEVLPYVNDKIWLVSYYNNVYAVALFIPIIFICGEVSEL--A-NYPH--L---  230 (324)
Q Consensus       159 ~~~~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~-~~~~--~---  230 (324)
                      ++-+.-..|+.+.+++.+.-|.+.++.+|.+++.+..|.+...|..+++.+++.......--.+..  + ..+.  +   
T Consensus       169 ~d~s~iitGdllIiiaqiivaiQ~v~Eek~l~~~nV~pl~avg~eGlfG~v~~slL~i~m~yi~~~~sfS~~~~g~~eD~  248 (372)
T KOG3912|consen  169 TDYSSIITGDLLIIIAQIIVAIQMVCEEKQLKKSNVAPLQAVGWEGLFGLVILSLLAIPMYYIPSGDSFSCNPRGVLEDW  248 (372)
T ss_pred             cccccchhhhHHHHHHHHHHHHHHHHHHhhhhhccCCHHHHhhhhhhHHHHHHHHHHHHHhheecCCcCcCCCCcchhhH
Confidence            122344679999999999999999999999999999999999999999976665444332111111  0 0000  0   


Q ss_pred             --------chhHHHHHHHHHHHHHHHHHHHHHHHHhccCchhhhhhccchHHHHHHHHHHHhCCCcchhhHhHHHHHhhh
Q psy1072         231 --------FSFYFWILLTIGGVFGLTIGYVTSLQIQVTSPLTHNISGTAKASFHTVLATYWYSEFKPLLWWISNGIILSG  302 (324)
Q Consensus       231 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~si~~~~~~v~~~~~~~~~~~e~~~~~~~~G~~li~~g  302 (324)
                              ..|.....+....+-....|+......|..|+++..+...++.....+++.....|..+..|+.|.++...|
T Consensus       249 ~~~~~~~~e~p~l~val~~~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~~E~f~llqilGFliLi~G  328 (372)
T KOG3912|consen  249 GDAFAALQESPSLAVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMGWEYFHLLQILGFLILIMG  328 (372)
T ss_pred             HHHHHHhcCCchhHHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence                    112111111111111122344444557889999999999999999999999999999999999999999999


Q ss_pred             hhheeh
Q psy1072         303 SATYAL  308 (324)
Q Consensus       303 ~~~~~~  308 (324)
                      .++|+-
T Consensus       329 i~lY~~  334 (372)
T KOG3912|consen  329 IILYNQ  334 (372)
T ss_pred             HHHHHH
Confidence            999984

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=99.71  E-value=8.1e-17  Score=128.58  Aligned_cols=142  Identities=24%  Similarity=0.327  Sum_probs=126.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhccC-----CCCceeeehhhhhhHHHHHHHHHHhhcccccccccCC-----Cc-chhHH
Q psy1072         167 GTIYGVISSFAQALFSIHTKEVLPY-----VNDKIWLVSYYNNVYAVALFIPIIFICGEVSELANYP-----HL-FSFYF  235 (324)
Q Consensus       167 G~~~~l~s~~~~a~~~v~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-----~~-~~~~~  235 (324)
                      |+++++.|.++.|++.++.|+.+++     .+.++.++.+|+++.+++.+.|..+..++........     .. .++..
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   80 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF   80 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence            7899999999999999999999998     5788999999999999999999999885544222111     01 14577


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhccCchhhhhhccchHHHHHHHHHHHhCCCcchhhHhHHHHHhhhhhheeh
Q psy1072         236 WILLTIGGVFGLTIGYVTSLQIQVTSPLTHNISGTAKASFHTVLATYWYSEFKPLLWWISNGIILSGSATYAL  308 (324)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~si~~~~~~v~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~~  308 (324)
                      +..++..|+.++..++..+.+++++||.+.++.+.+|.+..++.|++++||++|+.+++|+++.+.|+.+|++
T Consensus        81 ~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ysy  153 (153)
T PF03151_consen   81 IFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYSY  153 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheeeC
Confidence            8889999999999999999999999999999999999999999999999999999999999999999999985

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>KOG2766|consensus

Probab=99.49  E-value=2.1e-14  Score=118.01  Aligned_cols=259  Identities=12%  Similarity=0.157  Sum_probs=190.2

Q ss_pred             HHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhhCCCCCcCCCCCCCChhhhhHHHHHHHHHHHHHHHhhhhcccc
Q psy1072          28 LNKTLLSELQLDAPIFVTWYQCLVSAIICFVLCQLSQQYPKNFSFPYGNPFDTNNMRNLVPLTSCFILMLSFNNLCLKNV  107 (324)
Q Consensus        28 ~~K~~l~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~  107 (324)
                      -+.++-+. +.+.|..-++.....-+++-.++..++++            .-+..|++++.+++...-.+++-..|.||+
T Consensus        36 tss~la~k-~iN~Pt~QtFl~Y~LLalVY~~~~~fR~~------------~~~~~~~hYilla~~DVEaNy~vV~AyQyT  102 (336)
T KOG2766|consen   36 TSSELARK-GINAPTSQTFLNYVLLALVYGPIMLFRRK------------YIKAKWRHYILLAFVDVEANYFVVKAYQYT  102 (336)
T ss_pred             hhHHHHhc-cCCCccHHHHHHHHHHHHHHhhHHHhhhH------------HHHHHHHHhhheeEEeecccEEEeeehhhc
Confidence            34555444 46678887777777666666665555431            222457788888888777777778899999


Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHhccccchhhHHHHHHHhhhceeeeecc-----CCCccchhhHHHHHHHHHHHHHHHH
Q psy1072         108 GVAFYYVSRSLTTVFNVILTYILLQEKTSHLAILSCFIIFSGFALGVNQE-----GVAGSFSTLGTIYGVISSFAQALFS  182 (324)
Q Consensus       108 ~~~~~~~l~~~~p~~~~~~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~-----~~~~~~~~~G~~~~l~s~~~~a~~~  182 (324)
                      +....+++..-..+.+.+++|+++|.|..+.++.++++++.|+++.+..|     ..+++.+..|++++++++-+||..+
T Consensus       103 smtSi~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV~agd~aggsnp~~GD~lvi~GATlYaVSN  182 (336)
T KOG2766|consen  103 SMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDVHAGDRAGGSNPVKGDFLVIAGATLYAVSN  182 (336)
T ss_pred             chHHHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEeeeccccccCCCCCccCcEEEEecceeeeecc
Confidence            99999999999999999999999999999999999999999999865443     2234566789999999999999999


Q ss_pred             HHHHhhccCCCCceeeehhhhhhHHHHHHHHHHhhcccccccccCCCcchhHHHHHHHHHHHHHHHHHHHHH-HHHhccC
Q psy1072         183 IHTKEVLPYVNDKIWLVSYYNNVYAVALFIPIIFICGEVSELANYPHLFSFYFWILLTIGGVFGLTIGYVTS-LQIQVTS  261 (324)
Q Consensus       183 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~  261 (324)
                      +..+.+.++  .+..+++....++|+++...-. .. |..+.... + ++.... ..+ ...++...-|... ..+|..+
T Consensus       183 v~EEflvkn--~d~~elm~~lgLfGaIIsaIQ~-i~-~~~~~~tl-~-w~~~i~-~yl-~f~L~MFllYsl~pil~k~~~  254 (336)
T KOG2766|consen  183 VSEEFLVKN--ADRVELMGFLGLFGAIISAIQF-IF-ERHHVSTL-H-WDSAIF-LYL-RFALTMFLLYSLAPILIKTNS  254 (336)
T ss_pred             ccHHHHHhc--CcHHHHHHHHHHHHHHHHHHHH-hh-hccceeeE-e-ehHHHH-HHH-HHHHHHHHHHHhhHHheecCC
Confidence            999998774  4456777788888888877663 33 43332211 1 111111 111 1222233333333 4488899


Q ss_pred             chhhhhhccchHHHHHHHHHHHhCCCcchhhHhHHHHHhhhhhheehh
Q psy1072         262 PLTHNISGTAKASFHTVLATYWYSEFKPLLWWISNGIILSGSATYALV  309 (324)
Q Consensus       262 a~~~si~~~~~~v~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~~~  309 (324)
                      ++..++.-......+.++  ..||-+.+|...+....+..|.++|..+
T Consensus       255 aT~~nlslLTsDmwsl~i--~~FgYhv~wLY~laF~~i~~GliiYs~r  300 (336)
T KOG2766|consen  255 ATMFNLSLLTSDMWSLLI--RTFGYHVDWLYFLAFATIATGLIIYSTR  300 (336)
T ss_pred             ceEEEhhHhHHHHHHHHH--HHHhcchhhhhHHHHHHHHHhhEEeecc
Confidence            998888888888888887  6678889999999999999999999654

>COG2510 Predicted membrane protein [Function unknown]

Probab=99.33  E-value=3.1e-11  Score=89.04  Aligned_cols=136  Identities=15%  Similarity=0.175  Sum_probs=113.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhccCCCCceeeehhhhhhHHHHHHHHHHhhcccccccccCCCcchhHHHHHHHHHHHHH
Q psy1072         167 GTIYGVISSFAQALFSIHTKEVLPYVNDKIWLVSYYNNVYAVALFIPIIFICGEVSELANYPHLFSFYFWILLTIGGVFG  246 (324)
Q Consensus       167 G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (324)
                      -.+++++|++++++..+..|--+++  .+|...+...+.....++..+....|..+..    ...++..|..++.+|+.+
T Consensus         4 ~~~~ALLsA~fa~L~~iF~KIGl~~--vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~----~~~~~k~~lflilSGla~   77 (140)
T COG2510           4 AIIYALLSALFAGLTPIFAKIGLEG--VDPDFATTIRTIVILIFLLIVLLVTGNWQAG----GEIGPKSWLFLILSGLAG   77 (140)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhccc--cCccHHHHHHHHHHHHHHHHHHHhcCceecc----cccCcceehhhhHHHHHH
Confidence            3589999999999999999987764  4555667777788888888888887664443    224555688888999888


Q ss_pred             HHHHHHHHHHHhccCchhhhhhccchHHHHHHHHHHHhCCCcchhhHhHHHHHhhhhhheeh
Q psy1072         247 LTIGYVTSLQIQVTSPLTHNISGTAKASFHTVLATYWYSEFKPLLWWISNGIILSGSATYAL  308 (324)
Q Consensus       247 ~~~~~~~~~~~~~~~a~~~si~~~~~~v~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~~  308 (324)
                      -...+.+|+++|.-.+..+.-..-..+++++++|++++||++|..+|+|++++.+|..+.++
T Consensus        78 glswl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs~  139 (140)
T COG2510          78 GLSWLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVSL  139 (140)
T ss_pred             HHHHHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEec
Confidence            77788888899999999999999999999999999999999999999999999999988654

>TIGR00803 nst UDP-galactose transporter

Probab=99.32  E-value=1.1e-11  Score=105.23  Aligned_cols=191  Identities=9%  Similarity=0.110  Sum_probs=132.4

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHhccccchhhHHHHHHHhhhceeee--------------------eccCC----Ccc
Q psy1072         107 VGVAFYYVSRSLTTVFNVILTYILLQEKTSHLAILSCFIIFSGFALGV--------------------NQEGV----AGS  162 (324)
Q Consensus       107 ~~~~~~~~l~~~~p~~~~~~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~--------------------~~~~~----~~~  162 (324)
                      ++.|.....++..++++++.++.+.+||.+..++.+.++...|+....                    .++..    ...
T Consensus         2 isvPa~~~~~s~~l~~v~l~~~~~~~~~~~~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~~~~~g   81 (222)
T TIGR00803         2 LSVPIHIIFKQNNLVLIALGNLLAAGKQVTQLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAKTLMFG   81 (222)
T ss_pred             ccccchHHHHhcchHHHHHhcccccceeeehHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCccccccc
Confidence            467788889999999999999999999988999999999888876411                    11110    112


Q ss_pred             chhhHHHHHHHHHHHHHHHHHHHHhhccCCCCceeeehhhhhhHHHHHHHHHHhhccc----ccccccCC--CcchhHHH
Q psy1072         163 FSTLGTIYGVISSFAQALFSIHTKEVLPYVNDKIWLVSYYNNVYAVALFIPIIFICGE----VSELANYP--HLFSFYFW  236 (324)
Q Consensus       163 ~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~----~~~~~~~~--~~~~~~~~  236 (324)
                      ..+.|....+.+..+.++..+++++..|+++     .++|.+..+..++.+.....++    .....+.+  ...+...|
T Consensus        82 ~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~~-----~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (222)
T TIGR00803        82 NPVVGLSAVLSALLSSGFAGVYFEKILKDGD-----TMFWSRNLQLPLFGLFSTFSVLLWSDGTLISNFGFFIGYPTAVW  156 (222)
T ss_pred             cHHHHHHHHHHHHHHHhhhHHHHHHcccCCC-----CchHHHHHHHHHHHHHHHHHHHhhcccchhhccCcccCCchHHH
Confidence            4467888888899999999999999866532     2355544444444333212111    11111111  11122223


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhccCchhhhhhccchHHHHHHHHHHHhCCCcchhhHhHHHHHhhhhhhe
Q psy1072         237 ILLTIGGVFGLTIGYVTSLQIQVTSPLTHNISGTAKASFHTVLATYWYSEFKPLLWWISNGIILSGSATY  306 (324)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~si~~~~~~v~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~  306 (324)
                      ..++    .....+....+++|+.++.+.++....+++.+.++++++|||+++..++.|..+++.|+.+|
T Consensus       157 ~~~~----~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~lY  222 (222)
T TIGR00803       157 IVGL----LNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFLY  222 (222)
T ss_pred             HHHH----HHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEeC
Confidence            2222    23334444567799999999999999999999999999999999999999999999998876

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>COG2510 Predicted membrane protein [Function unknown]

Probab=99.26  E-value=1.1e-10  Score=86.21  Aligned_cols=133  Identities=16%  Similarity=0.106  Sum_probs=110.9

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhhCCCCCcCCCCCCCChhhhhHHHH
Q psy1072           9 ANIIFVVALYWCVSITTIFLNKTLLSELQLDAPIFVTWYQCLVSAIICFVLCQLSQQYPKNFSFPYGNPFDTNNMRNLVP   88 (324)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~K~~l~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (324)
                      .+..+.+.+|....+    ..|..+++.   .|.+-+..|..+....+..++...++.    +.+  .+.+.+.+..+..
T Consensus         6 ~~ALLsA~fa~L~~i----F~KIGl~~v---dp~~At~IRtiVi~~~l~~v~~~~g~~----~~~--~~~~~k~~lflil   72 (140)
T COG2510           6 IYALLSALFAGLTPI----FAKIGLEGV---DPDFATTIRTIVILIFLLIVLLVTGNW----QAG--GEIGPKSWLFLIL   72 (140)
T ss_pred             HHHHHHHHHHHHHHH----HHHHhcccc---CccHHHHHHHHHHHHHHHHHHHhcCce----ecc--cccCcceehhhhH
Confidence            344556666655544    569999974   388999999999999988887765422    222  2467778888888


Q ss_pred             HHHHHHHHHHHhhhhccccchhHHHHHHHHHHHHHHHHHHHHhccccchhhHHHHHHHhhhceeee
Q psy1072          89 LTSCFILMLSFNNLCLKNVGVAFYYVSRSLTTVFNVILTYILLQEKTSHLAILSCFIIFSGFALGV  154 (324)
Q Consensus        89 ~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~p~~~~~~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~  154 (324)
                      .|+....+..+++.|++-.++|...-+..++|+++.+++++++|||++..+|+++.+..+|.++..
T Consensus        73 SGla~glswl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs  138 (140)
T COG2510          73 SGLAGGLSWLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVS  138 (140)
T ss_pred             HHHHHHHHHHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEe
Confidence            898899999999999999999999999999999999999999999999999999999999998865

>KOG4314|consensus

Probab=99.12  E-value=2.8e-10  Score=90.43  Aligned_cols=223  Identities=16%  Similarity=0.169  Sum_probs=159.2

Q ss_pred             hhHHHHHHHHHHHHHHHhhhhccccchhHHHHHHHHHHHHHHHHHHHHhccccchhhHHHHHHHhhhceeeeeccCCCcc
Q psy1072          83 MRNLVPLTSCFILMLSFNNLCLKNVGVAFYYVSRSLTTVFNVILTYILLQEKTSHLAILSCFIIFSGFALGVNQEGVAGS  162 (324)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~p~~~~~~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~  162 (324)
                      +++..|.+++-.+.++.+..+++..+++.++.+..|.--|+.+++++.+|+|+..-++.+.++++-|+++..+.|.+ -.
T Consensus        53 ~~~taPF~i~Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN~-~a  131 (290)
T KOG4314|consen   53 FIRTAPFSIFWTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADNE-HA  131 (290)
T ss_pred             eeeecceEEEEecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccch-hh
Confidence            44556667777788888889999999999999999999999999999999999999999999999999998866543 35


Q ss_pred             chhhHHHHHHHHHHHHHHHHHHHHhhccCCCCceeeehhhhhhHHHHHHHHHHh-----hcccccccccCCCcchhHHHH
Q psy1072         163 FSTLGTIYGVISSFAQALFSIHTKEVLPYVNDKIWLVSYYNNVYAVALFIPIIF-----ICGEVSELANYPHLFSFYFWI  237 (324)
Q Consensus       163 ~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~g~~~~~~~~~~~~~~~~~~  237 (324)
                      .++.|+..++.|+...|+|.++.|+...+.+..  +...+++..+..-+.....     ......+..++..  .|  |.
T Consensus       132 ~e~iGi~~AV~SA~~aAlYKV~FK~~iGnAn~G--daa~FmS~LGF~NL~~~~~~~lIL~~T~VE~~qsFA~--~P--WG  205 (290)
T KOG4314|consen  132 DEIIGIACAVGSAFMAALYKVLFKMFIGNANFG--DAAHFMSCLGFFNLCFISFPALILAFTGVEHLQSFAA--AP--WG  205 (290)
T ss_pred             hhhhhHHHHHHHHHHHHHHHHHHHHHhccCcch--hHHHHHHHHHHHHHHHHhhhHHHHHHhchHHHHHHhh--CC--ch
Confidence            678999999999999999999999988765443  4555665555443332211     1111111111110  11  43


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhccCchhhhhhccchHHHHHHHHHHHhCCCcchhhHhHHHHHhhhhhheehhccc
Q psy1072         238 LLTIGGVFGLTIGYVTSLQIQVTSPLTHNISGTAKASFHTVLATYWYSEFKPLLWWISNGIILSGSATYALVKKK  312 (324)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~si~~~~~~v~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~~~~~~  312 (324)
                      .+.-...+....++.....+.-..|...|+=......--..+..++-+-..+.....|..++.+|.++.-.+..+
T Consensus       206 ~l~G~A~L~lAFN~~iN~GiaL~~PilISiG~l~~iP~NaaiDiL~q~l~~ntl~La~T~iI~i~FiLiiiP~d~  280 (290)
T KOG4314|consen  206 CLCGAAGLSLAFNFLINFGIALLNPILISIGMLCGIPGNAAIDILFQELEFNTLFLAATCIICIGFILIIIPEDK  280 (290)
T ss_pred             hhhhHHHHHHHHhhheeehhhhhchhhheehheecCcchhHHHHHHHHHHHHHHHHHHHHHHHHhHHheecccch
Confidence            333333334444554445566677777776555555555677777766678899999999999999987765444

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=99.09  E-value=2.7e-10  Score=85.89  Aligned_cols=107  Identities=14%  Similarity=0.162  Sum_probs=82.8

Q ss_pred             HHHHHHHHHHHHHHHHHhhhCCCCCcCCCCCCCChhhhhHHHHHHHHHH-HHHHHhhhhccccchhHHHHHHHHHHHHHH
Q psy1072          46 WYQCLVSAIICFVLCQLSQQYPKNFSFPYGNPFDTNNMRNLVPLTSCFI-LMLSFNNLCLKNVGVAFYYVSRSLTTVFNV  124 (324)
Q Consensus        46 ~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~al~~~~~~~~~~l~~~~p~~~~  124 (324)
                      .+|...+.+++......+++.+   +..+  ..+++++..+...+.+.. ....+.+.|+++.+ +..+.+.+++|+++.
T Consensus         2 a~r~~~~~l~~~~~~~~~~~~~---~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~   75 (113)
T PF13536_consen    2 AFRYLFSVLFLLIILLIRGRLR---DLFR--ALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTA   75 (113)
T ss_pred             HHHHHHHHHHHHHHHHHHccHH---HHHH--HHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHH
Confidence            4688888888877766643221   1110  122344556666676664 88999999999999 588899999999999


Q ss_pred             HHHHHHhccccchhhHHHHHHHhhhceeeeeccC
Q psy1072         125 ILTYILLQEKTSHLAILSCFIIFSGFALGVNQEG  158 (324)
Q Consensus       125 ~~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~  158 (324)
                      +++.+++|||++++++.+++++++|+++...++.
T Consensus        76 ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~~~~  109 (113)
T PF13536_consen   76 LLSWLFFKERLSPRRWLAILLILIGVILIAWSDL  109 (113)
T ss_pred             HHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhc
Confidence            9999999999999999999999999999776553

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=99.09  E-value=7.2e-10  Score=84.88  Aligned_cols=116  Identities=22%  Similarity=0.357  Sum_probs=94.5

Q ss_pred             HHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhhCCCCCcCCCCCCCChhhhhHHHHHHHH-HHHHHHHhhhhcc
Q psy1072          27 FLNKTLLSELQLDAPIFVTWYQCLVSAIICFVLCQLSQQYPKNFSFPYGNPFDTNNMRNLVPLTSC-FILMLSFNNLCLK  105 (324)
Q Consensus        27 ~~~K~~l~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~al~  105 (324)
                      ..+|...++  . +|....++|+..+.+ +.+.....++.+     +  .+.+++++......+.+ ......+.+.+++
T Consensus         8 ~~~k~~~~~--~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~-----~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~   76 (126)
T PF00892_consen    8 VFSKKLLKK--I-SPLSITFWRFLIAGI-LLILLLILGRKP-----F--KNLSPRQWLWLLFLGLLGTALAYLLYFYALK   76 (126)
T ss_pred             HHHHHHhcc--C-CHHHHHHHHHHHHHH-HHHHHHhhcccc-----c--cCCChhhhhhhhHhhccceehHHHHHHHHHH
Confidence            356888876  4 589999999999987 555544433221     1  13555667777777776 5789999999999


Q ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHhccccchhhHHHHHHHhhhceee
Q psy1072         106 NVGVAFYYVSRSLTTVFNVILTYILLQEKTSHLAILSCFIIFSGFALG  153 (324)
Q Consensus       106 ~~~~~~~~~l~~~~p~~~~~~~~~~~~e~~~~~~~~~~~l~~~Gv~l~  153 (324)
                      +.+++..+.+.+++|+++.+++++++||+++++++.++++++.|+++.
T Consensus        77 ~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~  124 (126)
T PF00892_consen   77 YISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLI  124 (126)
T ss_pred             hcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999998764

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=98.99  E-value=9.8e-10  Score=84.14  Aligned_cols=123  Identities=17%  Similarity=0.223  Sum_probs=94.2

Q ss_pred             HHHHHHHHHHHhhccCCCCceeeehhhhhhHHHHHHHHHHhhcccccccccCCCcchhHHHHHHHHHHHHH-HHHHHHHH
Q psy1072         176 FAQALFSIHTKEVLPYVNDKIWLVSYYNNVYAVALFIPIIFICGEVSELANYPHLFSFYFWILLTIGGVFG-LTIGYVTS  254 (324)
Q Consensus       176 ~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  254 (324)
                      ++||.+.+..|+..++  .++.....++...+.+ +.+.....+..+ .    ...+...+......+.++ .......+
T Consensus         1 ~~~a~~~~~~k~~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~   72 (126)
T PF00892_consen    1 FSWAIYSVFSKKLLKK--ISPLSITFWRFLIAGI-LLILLLILGRKP-F----KNLSPRQWLWLLFLGLLGTALAYLLYF   72 (126)
T ss_pred             ceeeeHHHHHHHHhcc--CCHHHHHHHHHHHHHH-HHHHHHhhcccc-c----cCCChhhhhhhhHhhccceehHHHHHH
Confidence            3678889999998775  6778899999888887 666655543322 1    112233345556666664 44444455


Q ss_pred             HHHhccCchhhhhhccchHHHHHHHHHHHhCCCcchhhHhHHHHHhhhhhhe
Q psy1072         255 LQIQVTSPLTHNISGTAKASFHTVLATYWYSEFKPLLWWISNGIILSGSATY  306 (324)
Q Consensus       255 ~~~~~~~a~~~si~~~~~~v~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~  306 (324)
                      ..+++.++...+....++|+++.++++++++|++++.+++|+++++.|+.+.
T Consensus        73 ~a~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~  124 (126)
T PF00892_consen   73 YALKYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLI  124 (126)
T ss_pred             HHHHhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHH
Confidence            7799999999999999999999999999999999999999999999998864

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=98.90  E-value=3.7e-07  Score=78.06  Aligned_cols=212  Identities=13%  Similarity=0.021  Sum_probs=152.6

Q ss_pred             hhhhHHHHHHHHHHHHHHHhhhhccccchhHHHHHH-HHHHHHHHHHHHHHhccccchhhH----HHHHHHhhhceeeee
Q psy1072          81 NNMRNLVPLTSCFILMLSFNNLCLKNVGVAFYYVSR-SLTTVFNVILTYILLQEKTSHLAI----LSCFIIFSGFALGVN  155 (324)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l~-~~~p~~~~~~~~~~~~e~~~~~~~----~~~~l~~~Gv~l~~~  155 (324)
                      +.+..-+..|++-..++..++.|.++.++|...=+. ..+.+.+.+.++++++|-.+..++    .++++.++|+.+...
T Consensus        43 ~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts~  122 (269)
T PF06800_consen   43 TSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTSY  122 (269)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhcc
Confidence            556666777788889999999999999988877555 677888999999999997765554    488888899998775


Q ss_pred             ccCCCc-----cchhhHHHHHHHHHHHHHHHHHHHHhhccCCCCceeeehhhhhhHHHHHHHHHHhhcccccccccCCCc
Q psy1072         156 QEGVAG-----SFSTLGTIYGVISSFAQALFSIHTKEVLPYVNDKIWLVSYYNNVYAVALFIPIIFICGEVSELANYPHL  230 (324)
Q Consensus       156 ~~~~~~-----~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~  230 (324)
                      .|.++.     +....|....+.+.+.|..|.+..|..    +.+++...+=+.+--.+....+....  .+...+    
T Consensus       123 ~~~~~~~~~~~~~~~kgi~~Ll~stigy~~Y~~~~~~~----~~~~~~~~lPqaiGm~i~a~i~~~~~--~~~~~~----  192 (269)
T PF06800_consen  123 QDKKSDKSSSKSNMKKGILALLISTIGYWIYSVIPKAF----HVSGWSAFLPQAIGMLIGAFIFNLFS--KKPFFE----  192 (269)
T ss_pred             ccccccccccccchhhHHHHHHHHHHHHHHHHHHHHhc----CCChhHhHHHHHHHHHHHHHHHhhcc--cccccc----
Confidence            554222     234569999999999999999998763    45555555544333222222222221  111111    


Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHhccCchhhhhhccchHHHHHHHHHHHhCCCcchhh----HhHHHHHhhhhhh
Q psy1072         231 FSFYFWILLTIGGVFGLTIGYVTSLQIQVTSPLTHNISGTAKASFHTVLATYWYSEFKPLLW----WISNGIILSGSAT  305 (324)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~si~~~~~~v~~~~~~~~~~~e~~~~~~----~~G~~li~~g~~~  305 (324)
                        .. -+.-+..|++-..-+...+...++.+..+.-.+..+..+++.+.|+++++|+-+.++    ++|.++++.|..+
T Consensus       193 --k~-~~~nil~G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~il  268 (269)
T PF06800_consen  193 --KK-SWKNILTGLIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAIL  268 (269)
T ss_pred             --cc-hHHhhHHHHHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhhc
Confidence              11 223356677766777777777889999988889999999999999999999988665    4788888887654

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=98.80  E-value=1.1e-07  Score=83.58  Aligned_cols=133  Identities=16%  Similarity=0.088  Sum_probs=99.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhccCCCCceeeehhhhhhHHHHHHHHHHhhcccccccccCCCcchhHHHHHHHHHHHHHH
Q psy1072         168 TIYGVISSFAQALFSIHTKEVLPYVNDKIWLVSYYNNVYAVALFIPIIFICGEVSELANYPHLFSFYFWILLTIGGVFGL  247 (324)
Q Consensus       168 ~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (324)
                      +++.+++++++|...+..|+..++  +++  ...+....+++.+.|........ ..+.   ..+...+......+....
T Consensus         3 ~~~~~~aa~~~a~~~~~~k~~~~~--~~~--~~~~~~~~~~~~l~~~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~   74 (281)
T TIGR03340         3 LTLVVFSALMHAGWNLMAKSHADK--EPD--FLWWALLAHSVLLTPYGLWYLAQ-VGWS---RLPATFWLLLAISAVANM   74 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCc--hhH--HHHHHHHHHHHHHHHHHHHhccc-CCCC---CcchhhHHHHHHHHHHHH
Confidence            578899999999999999987664  222  34666666777777766542111 1111   112223445555666666


Q ss_pred             HHHHHHHHHHhccCchhhhhhccchHHHHHHHHHHHhCCCcchhhHhHHHHHhhhhhheeh
Q psy1072         248 TIGYVTSLQIQVTSPLTHNISGTAKASFHTVLATYWYSEFKPLLWWISNGIILSGSATYAL  308 (324)
Q Consensus       248 ~~~~~~~~~~~~~~a~~~si~~~~~~v~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~~  308 (324)
                      ......+...++.++...+.+.+..|++..+++++++||+++..+++|+.+++.|+.+...
T Consensus        75 ~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~  135 (281)
T TIGR03340        75 VYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGL  135 (281)
T ss_pred             HHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhc
Confidence            6677777789999999999999999999999999999999999999999999999987553

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=98.77  E-value=1.1e-07  Score=84.28  Aligned_cols=140  Identities=11%  Similarity=0.072  Sum_probs=104.7

Q ss_pred             chhhHHHHHHHHHHHHHHHHHHHHhhccCCCCceeeehhhhhhHHHHHHHHHHhhcccccccccCCCcchhHHHHHHHHH
Q psy1072         163 FSTLGTIYGVISSFAQALFSIHTKEVLPYVNDKIWLVSYYNNVYAVALFIPIIFICGEVSELANYPHLFSFYFWILLTIG  242 (324)
Q Consensus       163 ~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~  242 (324)
                      ....|.++++++++.|+...+..|.. .  +.++.++..+....+.+.+.+.....++.+...+.  ..+...+......
T Consensus         5 ~~~~g~~~~l~a~~~wg~~~~~~k~~-~--~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~   79 (296)
T PRK15430          5 QTRQGVLLALAAYFIWGIAPAYFKLI-Y--YVPADEILTHRVIWSFFFMVVLMSICRQWSYLKTL--IQTPQKIFMLAVS   79 (296)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHh-c--CCCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHH--HcCHHHHHHHHHH
Confidence            44589999999999999999999764 3  46788999999999988777766543322111100  0122223333333


Q ss_pred             HHHHHHHHHHHHHHHhccCchhhhhhccchHHHHHHHHHHHhCCCcchhhHhHHHHHhhhhhhee
Q psy1072         243 GVFGLTIGYVTSLQIQVTSPLTHNISGTAKASFHTVLATYWYSEFKPLLWWISNGIILSGSATYA  307 (324)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~a~~~si~~~~~~v~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~  307 (324)
                      +..........++.+++.++..+++..+..|++..+++.++++|+++..+++|+++.++|+.+..
T Consensus        80 ~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~  144 (296)
T PRK15430         80 AVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQL  144 (296)
T ss_pred             HHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHH
Confidence            33334445556677999999999999999999999999999999999999999999999988753

>TIGR00688 rarD rarD protein

Probab=98.76  E-value=9.7e-08  Score=82.81  Aligned_cols=139  Identities=11%  Similarity=0.040  Sum_probs=105.6

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhhccCCCCceeeehhhhhhHHHHHHHHHHhhcccccccc-cCCCcchhHHHHHHHHHHH
Q psy1072         166 LGTIYGVISSFAQALFSIHTKEVLPYVNDKIWLVSYYNNVYAVALFIPIIFICGEVSELA-NYPHLFSFYFWILLTIGGV  244 (324)
Q Consensus       166 ~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~  244 (324)
                      .|..+.++++++|+...+..|.. .  +.++.++.++....+++.+.++....++..... +.........+......|+
T Consensus         2 ~g~~~~i~a~~~wg~~~~~~k~~-~--~~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~   78 (256)
T TIGR00688         2 KGIIVSLLASFLFGYMYYYSKLL-K--PLPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGL   78 (256)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHh-c--cCCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHH
Confidence            48899999999999999999973 3  478899999999999888877665543321110 0000011122334555666


Q ss_pred             HHHHHHHHHHHHHhccCchhhhhhccchHHHHHHHHHHHhCCCcchhhHhHHHHHhhhhhhee
Q psy1072         245 FGLTIGYVTSLQIQVTSPLTHNISGTAKASFHTVLATYWYSEFKPLLWWISNGIILSGSATYA  307 (324)
Q Consensus       245 ~~~~~~~~~~~~~~~~~a~~~si~~~~~~v~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~  307 (324)
                      +........+..++++++.++++..+..|++..+++.++++|+++..+++|.++.++|+.+..
T Consensus        79 ~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~  141 (256)
T TIGR00688        79 LIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNI  141 (256)
T ss_pred             HHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence            655556666677999999999999999999999999999999999999999999999988643

This uncharacterized protein is predicted to have many membrane-spanning domains.

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=98.75  E-value=2.7e-06  Score=75.04  Aligned_cols=221  Identities=17%  Similarity=0.066  Sum_probs=125.6

Q ss_pred             HHHHHH-HHHHHHHHhhhhccccchhHHHHHHHHHHHHHHHHHHHHhccccchhhHHHHHHHhhhceeee-eccCCCccc
Q psy1072          86 LVPLTS-CFILMLSFNNLCLKNVGVAFYYVSRSLTTVFNVILTYILLQEKTSHLAILSCFIIFSGFALGV-NQEGVAGSF  163 (324)
Q Consensus        86 ~~~~~~-~~~~~~~~~~~al~~~~~~~~~~l~~~~p~~~~~~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~-~~~~~~~~~  163 (324)
                      .+..|+ .+.++...++.|+.+.|.+..+-+.+...++.++++..++|||++++++.|..+++.|.++.. ..+.++...
T Consensus        52 ~W~~G~~~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~~~~~~~~~  131 (300)
T PF05653_consen   52 LWWIGLLLMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIFAPKEEPIH  131 (300)
T ss_pred             HHHHHHHHHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEeCCCCCCcC
Confidence            344444 456777889999999999999999999999999999999999999999999999999998754 222111111


Q ss_pred             h------------hhHHHHHHHHHHHHHHHHHHHHhhccCCCCceeeehhhhh---hHHHHHHHHHHhhcccccccc-cC
Q psy1072         164 S------------TLGTIYGVISSFAQALFSIHTKEVLPYVNDKIWLVSYYNN---VYAVALFIPIIFICGEVSELA-NY  227 (324)
Q Consensus       164 ~------------~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~~~~~~-~~  227 (324)
                      +            +..+....... ...+.. ..+   ++++.+  .+..|..   ..+....+..-.+........ ..
T Consensus       132 t~~~l~~~~~~~~fl~y~~~~~~~-~~~L~~-~~~---~r~g~~--~i~vyi~i~sl~Gs~tvl~~K~i~~~i~~~~~g~  204 (300)
T PF05653_consen  132 TLDELIALLSQPGFLVYFILVLVL-ILILIF-FIK---PRYGRR--NILVYISICSLIGSFTVLSAKAISILIKLTFSGD  204 (300)
T ss_pred             CHHHHHHHhcCcceehhHHHHHHH-HHHHHH-hhc---chhccc--ceEEEEEEeccccchhhhHHHHHHHHHHHHhcCc
Confidence            1            11111111111 111111 111   111211  1122222   122111111000000000000 11


Q ss_pred             CCcchhHHHHHHHHHHHHHHHHHHHHHHHHhccCchhhhhh-ccchHHHHHHHHHHHhCCC--cchhh----HhHHHHHh
Q psy1072         228 PHLFSFYFWILLTIGGVFGLTIGYVTSLQIQVTSPLTHNIS-GTAKASFHTVLATYWYSEF--KPLLW----WISNGIIL  300 (324)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~si~-~~~~~v~~~~~~~~~~~e~--~~~~~----~~G~~li~  300 (324)
                      +....+..|..++....+....-+..+.++++.+++...-. ...-...+++-|.++++|.  .++.+    ..|..+++
T Consensus       205 ~~f~~~~~y~l~~~~v~~~~~Q~~~LN~aL~~fd~~~V~P~~~v~~t~~~i~~g~i~f~e~~~~~~~~~~~~~~G~~~ii  284 (300)
T PF05653_consen  205 NQFTYPLTYLLLLVLVVTAVLQLYYLNKALKRFDTSLVVPVYYVFFTLSSIIGGAIFFQEFSRMTAWQIIGFLCGFLIII  284 (300)
T ss_pred             hhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhccceEEEeehhHHHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHH
Confidence            12234555655555544544555556677888887654433 4445566777788899975  45544    57888899


Q ss_pred             hhhhheehhcccc
Q psy1072         301 SGSATYALVKKKE  313 (324)
Q Consensus       301 ~g~~~~~~~~~~~  313 (324)
                      .|+.+.+..|+.+
T Consensus       285 ~GV~lL~~~~~~~  297 (300)
T PF05653_consen  285 IGVFLLSSSKDKE  297 (300)
T ss_pred             HhhheeeccCchh
Confidence            9999987655443

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=98.74  E-value=4.9e-07  Score=78.51  Aligned_cols=129  Identities=14%  Similarity=0.049  Sum_probs=94.8

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhhCCCCCcCCCCCCCChhhhhHHHH
Q psy1072           9 ANIIFVVALYWCVSITTIFLNKTLLSELQLDAPIFVTWYQCLVSAIICFVLCQLSQQYPKNFSFPYGNPFDTNNMRNLVP   88 (324)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~K~~l~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (324)
                      ........+|...+.    ..|...++.+. .+......|+..+.+++.+.....+.     + +   ..+.+++...+.
T Consensus       131 ~~~l~a~~~~a~~~~----~~k~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~-----~-~---~~~~~~~~~~~~  196 (260)
T TIGR00950       131 LLGLGSGISFALGTV----LYKRLVKKEGP-ELLQFTGWVLLLGALLLLPFAWFLGP-----N-P---QALSLQWGALLY  196 (260)
T ss_pred             HHHHHHHHHHHHHHH----HHhHHhhcCCc-hHHHHHHHHHHHHHHHHHHHHHhcCC-----C-C---CcchHHHHHHHH
Confidence            444556666655544    45777765432 23445557888888877776554221     1 1   124455666666


Q ss_pred             HHHH-HHHHHHHhhhhccccchhHHHHHHHHHHHHHHHHHHHHhccccchhhHHHHHHHhhhce
Q psy1072          89 LTSC-FILMLSFNNLCLKNVGVAFYYVSRSLTTVFNVILTYILLQEKTSHLAILSCFIIFSGFA  151 (324)
Q Consensus        89 ~~~~-~~~~~~~~~~al~~~~~~~~~~l~~~~p~~~~~~~~~~~~e~~~~~~~~~~~l~~~Gv~  151 (324)
                      .+.+ ......+.+.++++.+++..+.+.++.|++.++++++++||+++..++.+..+.+.|+.
T Consensus       197 ~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~~  260 (260)
T TIGR00950       197 LGLIGTALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAVL  260 (260)
T ss_pred             HHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhcC
Confidence            6665 46888899999999999999999999999999999999999999999999999999863

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=98.58  E-value=1.1e-06  Score=79.56  Aligned_cols=137  Identities=15%  Similarity=0.142  Sum_probs=108.0

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhhccCCCCceeeehhhhhhHHHHHHHHHHhhcccccccccCCCcchhHHHHHHHHHHHH
Q psy1072         166 LGTIYGVISSFAQALFSIHTKEVLPYVNDKIWLVSYYNNVYAVALFIPIIFICGEVSELANYPHLFSFYFWILLTIGGVF  245 (324)
Q Consensus       166 ~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (324)
                      .-+..+++..++|+.+.++.|..++ .+.++.....+....+++++.|+....+.....   + ..+...+..+...|++
T Consensus        13 ~~~~~~~~~q~~~~~~~~~~k~a~~-~G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~---~-~~~~~~~~~l~l~g~~   87 (358)
T PLN00411         13 VFLTAMLATETSVVGISTLFKVATS-KGLNIYPFLGYSYLLASLLLLPSLFFTNRSRSL---P-PLSVSILSKIGLLGFL   87 (358)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHH-CCCCccHHHHHHHHHHHHHHHHHHHHHHHhccc---C-cchHHHHHHHHHHHHH
Confidence            4567788889999999999998885 478889999999999999999887664211111   1 1123335666667777


Q ss_pred             HHHHHHHHHHHHhccCchhhhhhccchHHHHHHHHHHH------hCCCcchhhHhHHHHHhhhhhhee
Q psy1072         246 GLTIGYVTSLQIQVTSPLTHNISGTAKASFHTVLATYW------YSEFKPLLWWISNGIILSGSATYA  307 (324)
Q Consensus       246 ~~~~~~~~~~~~~~~~a~~~si~~~~~~v~~~~~~~~~------~~e~~~~~~~~G~~li~~g~~~~~  307 (324)
                      +...+...+..+++++|..+++..+..|++..++++++      ++|+++..+++|+++.++|+.+..
T Consensus        88 g~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~  155 (358)
T PLN00411         88 GSMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVI  155 (358)
T ss_pred             HHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHH
Confidence            75444455667999999999999999999999999999      699999999999999999988644

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=98.34  E-value=1e-05  Score=61.96  Aligned_cols=121  Identities=12%  Similarity=0.076  Sum_probs=83.6

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhhccCCCCceeeehhhhhhHHHHHHHHHHhhcccccccccCCCcchhHHHHHHHHHHHH
Q psy1072         166 LGTIYGVISSFAQALFSIHTKEVLPYVNDKIWLVSYYNNVYAVALFIPIIFICGEVSELANYPHLFSFYFWILLTIGGVF  245 (324)
Q Consensus       166 ~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (324)
                      .|+++.+.+.++.+...++.|+-.++.+..  +.... .       .......            .+|   ...++.|+.
T Consensus         2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g~~--~~~~~-~-------~~~~~~~------------~~p---~~~i~lgl~   56 (129)
T PRK02971          2 MGYLWGLASVLLASVAQLSLKWGMSRLPLL--SHAWD-F-------IAALLAF------------GLA---LRAVLLGLA   56 (129)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHhhCCCc--cchhH-H-------HHHHHHH------------hcc---HHHHHHHHH
Confidence            478999999999999999999887654321  11000 0       0000000            011   012456666


Q ss_pred             HHHHHHHHH-HHHhccCchhhhhhccchHHHHHHHHHH--HhCCCcchhhHhHHHHHhhhhhheehhcc
Q psy1072         246 GLTIGYVTS-LQIQVTSPLTHNISGTAKASFHTVLATY--WYSEFKPLLWWISNGIILSGSATYALVKK  311 (324)
Q Consensus       246 ~~~~~~~~~-~~~~~~~a~~~si~~~~~~v~~~~~~~~--~~~e~~~~~~~~G~~li~~g~~~~~~~~~  311 (324)
                      +++.++..+ ..+++.+...+.-.....++...+.++.  ++||++|+.+++|+++++.|+.+.++.++
T Consensus        57 ~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~~  125 (129)
T PRK02971         57 GYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPTT  125 (129)
T ss_pred             HHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCCC
Confidence            676766665 4589999998887777777777777774  89999999999999999999999876444

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=98.29  E-value=2.3e-05  Score=69.34  Aligned_cols=108  Identities=19%  Similarity=0.097  Sum_probs=84.2

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhhCCCCCcCCCCCCCChhhhhHHHHHHHH-HHHHHHHhhhhccccchhHHHHHHHHH
Q psy1072          41 PIFVTWYQCLVSAIICFVLCQLSQQYPKNFSFPYGNPFDTNNMRNLVPLTSC-FILMLSFNNLCLKNVGVAFYYVSRSLT  119 (324)
Q Consensus        41 p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~al~~~~~~~~~~l~~~~  119 (324)
                      +.....+++..+...+.++......     ..+  ...+.+.+..+...++. ..+...+.+.++++.+++..+++..++
T Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~--~~~~~~~~~~i~~l~i~~s~~~~~l~~~~~~~~~~~~~s~~~~l~  249 (292)
T PRK11272        177 GMMAGAAEMLAAGVVLLIASLLSGE-----RLT--ALPTLSGFLALGYLAVFGSIIAISAYMYLLRNVRPALATSYAYVN  249 (292)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHcCC-----ccc--ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHH
Confidence            4556678888887777665433210     111  11244566677777765 467888999999999999999999999


Q ss_pred             HHHHHHHHHHHhccccchhhHHHHHHHhhhceeeee
Q psy1072         120 TVFNVILTYILLQEKTSHLAILSCFIIFSGFALGVN  155 (324)
Q Consensus       120 p~~~~~~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~  155 (324)
                      |++.+++++++++|+++..++.|..+.+.|+.+...
T Consensus       250 Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~  285 (292)
T PRK11272        250 PVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTL  285 (292)
T ss_pred             HHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999987654

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=98.28  E-value=1.4e-05  Score=59.60  Aligned_cols=64  Identities=25%  Similarity=0.255  Sum_probs=59.0

Q ss_pred             HHHHHHHHHhhhhccccchhHHHHHHHHHHHHHHHHHHHHhccccchhhHHHHHHHhhhceeee
Q psy1072          91 SCFILMLSFNNLCLKNVGVAFYYVSRSLTTVFNVILTYILLQEKTSHLAILSCFIIFSGFALGV  154 (324)
Q Consensus        91 ~~~~~~~~~~~~al~~~~~~~~~~l~~~~p~~~~~~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~  154 (324)
                      +++.....+...+++..|.+.+..+-++.++++.+.+++++|||++.+++.++.+.++|+++..
T Consensus        45 ~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~  108 (111)
T PRK15051         45 ACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG  108 (111)
T ss_pred             HHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence            4466788888999999999999999999999999999999999999999999999999997643

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=98.27  E-value=3e-05  Score=68.62  Aligned_cols=115  Identities=14%  Similarity=0.093  Sum_probs=82.3

Q ss_pred             HHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhhCCCCCcCCCCCCCChhhhhHHHHHHHH-HHHHHHHhhhhccc
Q psy1072          28 LNKTLLSELQLDAPIFVTWYQCLVSAIICFVLCQLSQQYPKNFSFPYGNPFDTNNMRNLVPLTSC-FILMLSFNNLCLKN  106 (324)
Q Consensus        28 ~~K~~l~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~al~~  106 (324)
                      ..|...++  . +|.... .+...+.+.+.++.....      . +  ...+...+...+..+++ ..+...+++.++++
T Consensus       166 ~~r~~~~~--~-~~~~~~-~~~~~~~~~l~~~~~~~~------~-~--~~~~~~~~~~~l~lgv~~t~~~~~l~~~~~~~  232 (293)
T PRK10532        166 SGQRAGAE--H-GPATVA-IGSLIAALIFVPIGALQA------G-E--ALWHWSILPLGLAVAILSTALPYSLEMIALTR  232 (293)
T ss_pred             HHHHHhcc--C-CchHHH-HHHHHHHHHHHHHHHHcc------C-c--ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            44665444  2 355554 445555555555443321      1 1  12344444444556655 46788899999999


Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHhccccchhhHHHHHHHhhhceeeee
Q psy1072         107 VGVAFYYVSRSLTTVFNVILTYILLQEKTSHLAILSCFIIFSGFALGVN  155 (324)
Q Consensus       107 ~~~~~~~~l~~~~p~~~~~~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~  155 (324)
                      .+++.+++...++|++..++++++++|+++..++.|..+++.|++....
T Consensus       233 ~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~  281 (293)
T PRK10532        233 LPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTL  281 (293)
T ss_pred             cChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHh
Confidence            9999999999999999999999999999999999999999999987653

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=98.23  E-value=6.2e-05  Score=59.68  Aligned_cols=126  Identities=22%  Similarity=0.216  Sum_probs=91.0

Q ss_pred             HHHHHHHhc-----CCCCchHHHHHHHHHHHHHHHHHHHHHhhhCCCCCcCCC----CCCCChhhhhHHHHHHHHHHHHH
Q psy1072          27 FLNKTLLSE-----LQLDAPIFVTWYQCLVSAIICFVLCQLSQQYPKNFSFPY----GNPFDTNNMRNLVPLTSCFILML   97 (324)
Q Consensus        27 ~~~K~~l~~-----~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~   97 (324)
                      .+.|..+++     .+. .|..+.......+.+++.+........+......+    +...+.+.+...+..+++....+
T Consensus        17 v~~~~~~~~~~~~~~~~-~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n   95 (153)
T PF03151_consen   17 VLIKKLLKKVSSNSKKL-NPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNFIFLLILSGLLAFLYN   95 (153)
T ss_pred             HHHHHHHhcccccccCC-CHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHHHHHHHHHHHHHHHHH
Confidence            345666665     455 47777777777777777776655331110000000    00012244455566667777889


Q ss_pred             HHhhhhccccchhHHHHHHHHHHHHHHHHHHHHhccccchhhHHHHHHHhhhceee
Q psy1072          98 SFNNLCLKNVGVAFYYVSRSLTTVFNVILTYILLQEKTSHLAILSCFIIFSGFALG  153 (324)
Q Consensus        98 ~~~~~al~~~~~~~~~~l~~~~p~~~~~~~~~~~~e~~~~~~~~~~~l~~~Gv~l~  153 (324)
                      ...+..++++|+-+++++.....+.+.++++++++|+++..++.|+.+++.|..+-
T Consensus        96 ~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Y  151 (153)
T PF03151_consen   96 LSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLY  151 (153)
T ss_pred             HHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHhee
Confidence            99999999999999999999999999999999999999999999999999998764

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=98.20  E-value=1.3e-05  Score=68.41  Aligned_cols=139  Identities=12%  Similarity=0.156  Sum_probs=110.7

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHhhccCCCCceeeehhhhhhHHHHHHHHHHhhcccccccccCCCcchhHHHHHHHHHH
Q psy1072         164 STLGTIYGVISSFAQALFSIHTKEVLPYVNDKIWLVSYYNNVYAVALFIPIIFICGEVSELANYPHLFSFYFWILLTIGG  243 (324)
Q Consensus       164 ~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  243 (324)
                      +..|+++++.+-+.|+....+.|-+.   +.++.++..+..+.+..+.+.......+..+..+  ...+|..+......+
T Consensus         5 ~~~Gil~~l~Ay~lwG~lp~y~kll~---~~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~--~~~~p~~~~~~~l~a   79 (293)
T COG2962           5 SRKGILLALLAYLLWGLLPLYFKLLE---PLPATEILAHRVIWSFPFMLALLFLLRQWRELKQ--LLKQPKTLLMLALTA   79 (293)
T ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHc---cCCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHH--HHhCcHHHHHHHHHH
Confidence            45799999999999999999998663   3567799999999999888877777655555543  234566566666666


Q ss_pred             HHHHHHHHHHH-HHHhccCchhhhhhccchHHHHHHHHHHHhCCCcchhhHhHHHHHhhhhhheeh
Q psy1072         244 VFGLTIGYVTS-LQIQVTSPLTHNISGTAKASFHTVLATYWYSEFKPLLWWISNGIILSGSATYAL  308 (324)
Q Consensus       244 ~~~~~~~~~~~-~~~~~~~a~~~si~~~~~~v~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~~  308 (324)
                      +.-. .|...| ++..+-....+|.=.+++|++.+++|.++++|+++..|++..++..+|+..-.+
T Consensus        80 ~li~-~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~  144 (293)
T COG2962          80 LLIG-LNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTW  144 (293)
T ss_pred             HHHH-HHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHH
Confidence            5533 444444 678888889999999999999999999999999999999999999999887544

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=98.16  E-value=5.8e-05  Score=68.46  Aligned_cols=140  Identities=13%  Similarity=0.122  Sum_probs=101.8

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHhhccCCCCceeeehhhhhhHHHHHHHHHHhhcccccccccCCCcchhHHHHHHHHHH
Q psy1072         164 STLGTIYGVISSFAQALFSIHTKEVLPYVNDKIWLVSYYNNVYAVALFIPIIFICGEVSELANYPHLFSFYFWILLTIGG  243 (324)
Q Consensus       164 ~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  243 (324)
                      ++.-..+++.--.+...+.+..|..+++.+ -|+.+..++...+.+........ + .....+.+  .....+..++..|
T Consensus        47 ~~~~~~~~~~wy~~s~~~~~~nK~vl~~~~-~P~~l~~~~~~~~~l~~~~~~~~-~-~~~~~~~~--~~~~~~~~llp~g  121 (350)
T PTZ00343         47 KWKLALLFLTWYALNVLYVVDNKLALNMLP-LPWTISSLQLFVGWLFALLYWAT-G-FRKIPRIK--SLKLFLKNFLPQG  121 (350)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-hhHHHHHHHHHHHHHHHHHHHHh-C-CCCCCCCC--CHHHHHHHHHHHH
Confidence            344444555555556666788888887532 28899999988887665444322 1 11111111  1223466677788


Q ss_pred             HHHHHHHHHHHHHHhccCchhhhhhccchHHHHHHHHHHHhCCCcchhhHhHHHHHhhhhhheeh
Q psy1072         244 VFGLTIGYVTSLQIQVTSPLTHNISGTAKASFHTVLATYWYSEFKPLLWWISNGIILSGSATYAL  308 (324)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~a~~~si~~~~~~v~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~~  308 (324)
                      +++.......+..++++++..++++...+|++..+++.++++|+++..++.|.++++.|+.+...
T Consensus       122 l~~~~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~  186 (350)
T PTZ00343        122 LCHLFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASV  186 (350)
T ss_pred             HHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheec
Confidence            88777766666779999999999999999999999999999999999999999999999998653

>PRK11689 aromatic amino acid exporter; Provisional

Probab=98.11  E-value=6.9e-05  Score=66.39  Aligned_cols=78  Identities=14%  Similarity=0.097  Sum_probs=68.5

Q ss_pred             CChhhhhHHHHHHHHHHHHHHHhhhhccccchhHHHHHHHHHHHHHHHHHHHHhccccchhhHHHHHHHhhhceeeee
Q psy1072          78 FDTNNMRNLVPLTSCFILMLSFNNLCLKNVGVAFYYVSRSLTTVFNVILTYILLQEKTSHLAILSCFIIFSGFALGVN  155 (324)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~p~~~~~~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~  155 (324)
                      .+.+.+...+..++...+...+.+.++++.+++..+...+..|++..++++++++|+++..++.+.++++.|+.+...
T Consensus       210 ~~~~~~~~l~~~~~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~  287 (295)
T PRK11689        210 FSLPAIIKLLLAAAAMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWL  287 (295)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhh
Confidence            455556666666666677889999999999999999999999999999999999999999999999999999987654

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=98.10  E-value=1.9e-05  Score=59.33  Aligned_cols=104  Identities=17%  Similarity=0.324  Sum_probs=70.7

Q ss_pred             hhHHHHHHHHHHhhcccccccccCCCcchhHHHHHHHHHHHHHHHHHHHHH-HHHhccCchhhhhhccchHHHHHHHHHH
Q psy1072         204 NVYAVALFIPIIFICGEVSELANYPHLFSFYFWILLTIGGVFGLTIGYVTS-LQIQVTSPLTHNISGTAKASFHTVLATY  282 (324)
Q Consensus       204 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~a~~~si~~~~~~v~~~~~~~~  282 (324)
                      ...+.+.+..+....++..+..+... ..+  +......|.++...++..+ ...++.++ .......+.|+++.++|.+
T Consensus         5 ~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~g~~~~~~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~~   80 (113)
T PF13536_consen    5 YLFSVLFLLIILLIRGRLRDLFRALR-RKP--WLWLILAGLLGFGVAYLLFFYALSYAPA-LVAAIFSLSPIFTALLSWL   80 (113)
T ss_pred             HHHHHHHHHHHHHHHccHHHHHHHHH-hCc--HHHHHHHHHHHHHHHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHH
Confidence            34455555555555444433322111 111  3344555666654444444 56888885 7778889999999999999


Q ss_pred             HhCCCcchhhHhHHHHHhhhhhheehhcc
Q psy1072         283 WYSEFKPLLWWISNGIILSGSATYALVKK  311 (324)
Q Consensus       283 ~~~e~~~~~~~~G~~li~~g~~~~~~~~~  311 (324)
                      +++|+++..++.|.+++++|+.+..+.+.
T Consensus        81 ~~~er~~~~~~~a~~l~~~Gv~li~~~~~  109 (113)
T PF13536_consen   81 FFKERLSPRRWLAILLILIGVILIAWSDL  109 (113)
T ss_pred             HhcCCCCHHHHHHHHHHHHHHHHHhhhhc
Confidence            99999999999999999999998776543

>KOG2922|consensus

Probab=98.04  E-value=4.9e-05  Score=65.69  Aligned_cols=224  Identities=15%  Similarity=0.119  Sum_probs=131.6

Q ss_pred             HHHHHHH-HHHHHHHHhhhhccccchhHHHHHHHHHHHHHHHHHHHHhccccchhhHHHHHHHhhhceeeeeccCCCccc
Q psy1072          85 NLVPLTS-CFILMLSFNNLCLKNVGVAFYYVSRSLTTVFNVILTYILLQEKTSHLAILSCFIIFSGFALGVNQEGVAGSF  163 (324)
Q Consensus        85 ~~~~~~~-~~~~~~~~~~~al~~~~~~~~~~l~~~~p~~~~~~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~  163 (324)
                      ++++.|+ ...++-..++.|+.+.|.+..+-+.+++.+..++++..++|||++....+|+.++++|..+.+....++.+.
T Consensus        65 ~~Ww~G~ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~e~~i  144 (335)
T KOG2922|consen   65 PLWWAGMLTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAPKEQEI  144 (335)
T ss_pred             HHHHHHHHHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecCccccc
Confidence            3444454 467889999999999999999999999999999999999999999999999999999998876433222111


Q ss_pred             h----------hhHHH-HHHHHHHHHHHHHHHHHhhccCCCCceeeehhhhhhHHHHHHHHHHhhc--cc-c-cccccCC
Q psy1072         164 S----------TLGTI-YGVISSFAQALFSIHTKEVLPYVNDKIWLVSYYNNVYAVALFIPIIFIC--GE-V-SELANYP  228 (324)
Q Consensus       164 ~----------~~G~~-~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~-~-~~~~~~~  228 (324)
                      .          -.+++ ++..-.+...+-..+.|   ++++  ...+..|..+.+.+-.+-..-+-  |+ . ......+
T Consensus       145 ~t~~el~~~~~~~~Fliy~~~iil~~~il~~~~~---p~~g--~tnilvyi~i~s~iGS~tV~svKalg~aiklt~~g~~  219 (335)
T KOG2922|consen  145 ESVEEVWELATEPGFLVYVIIIILIVLILIFFYA---PRYG--QTNILVYIGICSLIGSLTVMSVKALGIAIKLTFSGNN  219 (335)
T ss_pred             ccHHHHHHHhcCccHHHHHHHHHHHHHHHheeec---cccc--ccceeehhhHhhhhcceeeeeHHHHHHHHHHHhcCCc
Confidence            1          01211 11111111111111111   1112  22445555444433211111000  00 0 0111122


Q ss_pred             CcchhHHHHHHHHHHHHHHHHHHHHHHHHhccCchh-hhhhccchHHHHHHHHHHHhCCC--cchh----hHhHHHHHhh
Q psy1072         229 HLFSFYFWILLTIGGVFGLTIGYVTSLQIQVTSPLT-HNISGTAKASFHTVLATYWYSEF--KPLL----WWISNGIILS  301 (324)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~-~si~~~~~~v~~~~~~~~~~~e~--~~~~----~~~G~~li~~  301 (324)
                      +...+..|.++.....+........+.+++..++.. ..+....-...++..|.++|+|-  .+..    ...|...++.
T Consensus       220 ql~~~~ty~~~l~~~~~~~~Q~~yLNkAL~~fntslV~PiyyV~fTtl~I~as~I~Fkew~~~~~~~i~~~~~Gf~ti~~  299 (335)
T KOG2922|consen  220 QLFYPLTWIFLLVVATCVSTQMNYLNKALDLFNTSIVSPIYYVMFTTLVILASAILFKEWSGQDALDIAGELCGFVTIFL  299 (335)
T ss_pred             ccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHhHHHhhh
Confidence            233445565555554444444444456677666554 44445566777788888888864  3443    4588899999


Q ss_pred             hhhheehhcccc
Q psy1072         302 GSATYALVKKKE  313 (324)
Q Consensus       302 g~~~~~~~~~~~  313 (324)
                      |+++....|.++
T Consensus       300 G~flL~~~kd~~  311 (335)
T KOG2922|consen  300 GIFLLHRTKDME  311 (335)
T ss_pred             eeeEeeeecccc
Confidence            999987665544

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=98.03  E-value=0.00016  Score=64.24  Aligned_cols=79  Identities=19%  Similarity=0.180  Sum_probs=68.4

Q ss_pred             CChhhhhHHHHHHHHH-HHHHHHhhhhccccchhHHHHHHHHHHHHHHHHHHHHhccccchhhHHHHHHHhhhceeeeec
Q psy1072          78 FDTNNMRNLVPLTSCF-ILMLSFNNLCLKNVGVAFYYVSRSLTTVFNVILTYILLQEKTSHLAILSCFIIFSGFALGVNQ  156 (324)
Q Consensus        78 ~~~~~~~~~~~~~~~~-~~~~~~~~~al~~~~~~~~~~l~~~~p~~~~~~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~  156 (324)
                      .+.+.+..++..+++. .+...+.+.++++.+++..+.+..++|++..++++++++|+++..++.|..++++|+.+...+
T Consensus       209 ~~~~~~~~l~~l~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~  288 (299)
T PRK11453        209 IDMTTILSLMYLAFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFG  288 (299)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcc
Confidence            4556676777777554 578888999999999999999999999999999999999999999999999999999876543

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=97.96  E-value=0.00014  Score=64.78  Aligned_cols=131  Identities=8%  Similarity=0.042  Sum_probs=94.7

Q ss_pred             HHHHHHHHHHhhccCCCCc--eeeehhhhhhHHHHHHHHHHhhcccccccccCCCcchhHHHHHHHHHHHHHHHHHHHHH
Q psy1072         177 AQALFSIHTKEVLPYVNDK--IWLVSYYNNVYAVALFIPIIFICGEVSELANYPHLFSFYFWILLTIGGVFGLTIGYVTS  254 (324)
Q Consensus       177 ~~a~~~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (324)
                      ++..+.+.+|++.++...+  +..+++.+....++...+.....+ .+.     ....+  +.-....+++..+.....+
T Consensus        11 ~~~~~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~-~~~-----~~~~~--~~~~~~~~~~~~~~~~~~~   82 (303)
T PF08449_consen   11 GCCSYGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFK-FPK-----SRKIP--LKKYAILSFLFFLASVLSN   82 (303)
T ss_pred             HHHHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhcc-ccC-----CCcCh--HHHHHHHHHHHHHHHHHHH
Confidence            3445667888888876655  666777776666666655554432 001     01111  2223344556566666777


Q ss_pred             HHHhccCchhhhhhccchHHHHHHHHHHHhCCCcchhhHhHHHHHhhhhhheehhcccccc
Q psy1072         255 LQIQVTSPLTHNISGTAKASFHTVLATYWYSEFKPLLWWISNGIILSGSATYALVKKKELD  315 (324)
Q Consensus       255 ~~~~~~~a~~~si~~~~~~v~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~~~~~~~~~  315 (324)
                      ..+++.+-.+..+....+++..++++.++++++.+..++++.+++.+|+.+....+.++++
T Consensus        83 ~al~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~  143 (303)
T PF08449_consen   83 AALKYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSS  143 (303)
T ss_pred             HHHHhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeeccccccc
Confidence            8899999999999999999999999999999999999999999999999999887655444

; GO: 0055085 transmembrane transport

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=97.94  E-value=0.00022  Score=63.36  Aligned_cols=124  Identities=14%  Similarity=0.092  Sum_probs=87.7

Q ss_pred             HHHHHHHHHHhhccCCCCceeeehhhhhhHHHHHHHHHHhhcccccccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHH
Q psy1072         177 AQALFSIHTKEVLPYVNDKIWLVSYYNNVYAVALFIPIIFICGEVSELANYPHLFSFYFWILLTIGGVFGLTIGYVTSLQ  256 (324)
Q Consensus       177 ~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (324)
                      +...++++.|...++ -..|..+...+...+.+...+... .+.. ...    ..+...+..+...|++........+..
T Consensus        13 ~~~~~~~~NK~~l~~-~~~P~~~~~~~~~~~~~~~~~~~~-~~~~-~~~----~~~~~~~~~~~~~g~~~~~~~~~~~~~   85 (302)
T TIGR00817        13 LNVYFNIYNKKLLNV-FPYPYFKTLISLAVGSLYCLLSWS-SGLP-KRL----KISSALLKLLLPVAIVHTIGHVTSNVS   85 (302)
T ss_pred             HHHHHHHHHHHHHhh-CChhHHHHHHHHHHHHHHHHHHHH-hCCC-CCC----CCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            334445566777764 245677777776666655544311 1111 111    112334666667777765555566677


Q ss_pred             HhccCchhhhhhccchHHHHHHHHHHHhCCCcchhhHhHHHHHhhhhhhee
Q psy1072         257 IQVTSPLTHNISGTAKASFHTVLATYWYSEFKPLLWWISNGIILSGSATYA  307 (324)
Q Consensus       257 ~~~~~a~~~si~~~~~~v~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~  307 (324)
                      ++++++...++.....|++..+++.++++|+++..++.|.++++.|+.+..
T Consensus        86 l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~  136 (302)
T TIGR00817        86 LSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALAS  136 (302)
T ss_pred             HHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhc
Confidence            999999999999999999999999999999999999999999999998653

specificities overlap.

>PRK13499 rhamnose-proton symporter; Provisional

Probab=97.92  E-value=0.0022  Score=57.40  Aligned_cols=229  Identities=12%  Similarity=0.087  Sum_probs=134.2

Q ss_pred             CChhhhhHHHHHHHHHHHHHHHhhhhccccchhHHHHH-HHHHHHHHHHHHHHHhcccc---c----hhhHHHHHHHhhh
Q psy1072          78 FDTNNMRNLVPLTSCFILMLSFNNLCLKNVGVAFYYVS-RSLTTVFNVILTYILLQEKT---S----HLAILSCFIIFSG  149 (324)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~p~~~~~~~~~~~~e~~---~----~~~~~~~~l~~~G  149 (324)
                      .+.+.+..-...|++-...+..+..+.+|.+++...-+ ..++.+...+...++++|=.   +    ..-..++++.++|
T Consensus        68 ~~~~~~~~~~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliG  147 (345)
T PRK13499         68 FSGSTLLPVFLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIG  147 (345)
T ss_pred             cCHHHHHHHHHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHH
Confidence            34455556666677777889999999999998887644 46677788888888887532   2    3356888899999


Q ss_pred             ceeeee----ccCC------CccchhhHHHHHHHHHHHHHHHHH-------HHHhhccCCCCceeeehhhhhh---HHHH
Q psy1072         150 FALGVN----QEGV------AGSFSTLGTIYGVISSFAQALFSI-------HTKEVLPYVNDKIWLVSYYNNV---YAVA  209 (324)
Q Consensus       150 v~l~~~----~~~~------~~~~~~~G~~~~l~s~~~~a~~~v-------~~~~~~~~~~~~~~~~~~~~~~---~~~~  209 (324)
                      +++...    .|.+      +......|+++++++.+.+++|..       ..+.. .+.+.++.....-+..   .+..
T Consensus       148 i~l~s~Ag~~k~~~~~~~~~~~~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a-~~~g~~~~~~~lp~~~~~~~G~~  226 (345)
T PRK13499        148 VAIVGRAGQLKERKMGIKKAEEFNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAA-AALGVDPLYAALPSYVVIMGGGA  226 (345)
T ss_pred             HHHHHHhhhhcccccccccccccchHhHHHHHHHHHHHHHHHHHHHhhccchhhhh-hhcCCCchHHHHHHHHHHHHHHH
Confidence            998654    3321      112345799999999999999994       33321 1123333222222211   2222


Q ss_pred             HHH-HHHhh---cccccc-cccCCCc--chhHHHHHHHHHHHHHHHHHHHHHHHHhccCchhhh----hhccchHHHHHH
Q psy1072         210 LFI-PIIFI---CGEVSE-LANYPHL--FSFYFWILLTIGGVFGLTIGYVTSLQIQVTSPLTHN----ISGTAKASFHTV  278 (324)
Q Consensus       210 ~~~-~~~~~---~g~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~s----i~~~~~~v~~~~  278 (324)
                      +.- .+...   .++... ..+....  ............|+.-...++.+....++.+.....    +...+.-+++.+
T Consensus       227 ~~n~~~~~~~~~k~~~~~~~~~~~~~~~~~~~n~l~~~l~G~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~Viistl  306 (345)
T PRK13499        227 ITNLGFCFIRLAKNKDLSLKADFSLAKPLLITNVLLSALAGVMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNL  306 (345)
T ss_pred             HHHHHHHHHHHhhCCCcccchhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHH
Confidence            221 11111   111111 1111100  002223334556666555555555555555433322    333666688888


Q ss_pred             HHHHHhCCCcc------hhhHhHHHHHhhhhhheeh
Q psy1072         279 LATYWYSEFKP------LLWWISNGIILSGSATYAL  308 (324)
Q Consensus       279 ~~~~~~~e~~~------~~~~~G~~li~~g~~~~~~  308 (324)
                      .|++ ++|.-+      ...++|.+++++|..+...
T Consensus       307 wGi~-lkE~K~a~~k~~~~l~~G~vliI~g~~lig~  341 (345)
T PRK13499        307 WGLV-LKEWKGASRRPVRVLSLGCVVIILAANIVGL  341 (345)
T ss_pred             hhhh-hhhccCCCccchhHHHHHHHHHHHHHHHHhh
Confidence            8985 999877      5558999999999887554

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=97.74  E-value=0.00063  Score=60.74  Aligned_cols=142  Identities=12%  Similarity=0.137  Sum_probs=94.5

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHhhccCCCCc-eeeehhhhhhHHHHHHHHHHhhcccccccccCCCcchhHHHHHHHHHH
Q psy1072         165 TLGTIYGVISSFAQALFSIHTKEVLPYVNDK-IWLVSYYNNVYAVALFIPIIFICGEVSELANYPHLFSFYFWILLTIGG  243 (324)
Q Consensus       165 ~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  243 (324)
                      +.+.+++-.-+++-+...+....+.++ +.+ |...++.+...-.+...+..............   . ..-|+.-+..+
T Consensus        12 ~~~~~lgQ~lsl~~~~t~~~s~~l~~~-~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~~---~-~~~~w~y~lla   86 (334)
T PF06027_consen   12 WIVLLLGQVLSLCITGTGTFSSLLANK-GVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWLKV---L-KRPWWKYFLLA   86 (334)
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHhc-CccCcHHHHHHHHHHHHHHHhhhhhhccccccchhh---c-chhHHHHHHHH
Confidence            345555666666666666666655544 322 44444444344444444444332111111110   1 11133344457


Q ss_pred             HHHHHHHHHHHHHHhccCchhhhhhccchHHHHHHHHHHHhCCCcchhhHhHHHHHhhhhhheehhcc
Q psy1072         244 VFGLTIGYVTSLQIQVTSPLTHNISGTAKASFHTVLATYWYSEFKPLLWWISNGIILSGSATYALVKK  311 (324)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~a~~~si~~~~~~v~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~~~~~  311 (324)
                      ++=...++....+.++++.+...++.....++..++++++++++.++.+++|+++++.|+.+......
T Consensus        87 ~~Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~  154 (334)
T PF06027_consen   87 LLDVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDV  154 (334)
T ss_pred             HHHHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeecc
Confidence            78788899988999999999999999999999999999999999999999999999999988766543

Some of the sequences in this family are annotated as putative membrane proteins.

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=97.72  E-value=0.00051  Score=51.23  Aligned_cols=63  Identities=16%  Similarity=0.073  Sum_probs=52.1

Q ss_pred             HHHHHHHHHH-HHHhccCchhhhhhccchHHHHHHHHHHHhCCCcchhhHhHHHHHhhhhhhee
Q psy1072         245 FGLTIGYVTS-LQIQVTSPLTHNISGTAKASFHTVLATYWYSEFKPLLWWISNGIILSGSATYA  307 (324)
Q Consensus       245 ~~~~~~~~~~-~~~~~~~a~~~si~~~~~~v~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~  307 (324)
                      .++...+..+ ..+++.+...+...-.+.++.+.++|+++|||++|+.+++|+.+++.|+....
T Consensus        45 ~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~  108 (111)
T PRK15051         45 ACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG  108 (111)
T ss_pred             HHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence            3333333333 45889999988888889999999999999999999999999999999988654

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=97.71  E-value=0.00043  Score=61.09  Aligned_cols=132  Identities=9%  Similarity=0.044  Sum_probs=93.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhccCCCCceeeehhhhhhHHHHHHHHHHhhcccccccccCCCcchhHHHHHHHHHHHHH
Q psy1072         167 GTIYGVISSFAQALFSIHTKEVLPYVNDKIWLVSYYNNVYAVALFIPIIFICGEVSELANYPHLFSFYFWILLTIGGVFG  246 (324)
Q Consensus       167 G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (324)
                      |++++++++++|+...+..|+..   +.++.+..  ....+.+++..+.....++.       ..++..+..-+..|+.-
T Consensus         2 ~~l~~lia~~~wGs~g~~~k~~~---g~~~~~~~--~~~~g~l~~~~~~~~~~~~~-------~~~~~~~~~g~l~G~~w   69 (290)
T TIGR00776         2 DILIALIPALFWGSFVLINVKIG---GGPYSQTL--GTTFGALILSIAIAIFVLPE-------FWALSIFLVGLLSGAFW   69 (290)
T ss_pred             chHHHHHHHHHHhhhHHHHhccC---CCHHHHHH--HHHHHHHHHHHHHHHHhCCc-------ccccHHHHHHHHHHHHH
Confidence            67899999999999999998863   33322222  23334444443333332211       12344455566677776


Q ss_pred             HHHHHHHHHHHhccCchhhhhhcc-chHHHHHHHHHHHhCCCcchhh----HhHHHHHhhhhhheehhc
Q psy1072         247 LTIGYVTSLQIQVTSPLTHNISGT-AKASFHTVLATYWYSEFKPLLW----WISNGIILSGSATYALVK  310 (324)
Q Consensus       247 ~~~~~~~~~~~~~~~a~~~si~~~-~~~v~~~~~~~~~~~e~~~~~~----~~G~~li~~g~~~~~~~~  310 (324)
                      ...++..+.++++.+...+-.+.+ +.++...+++.++++|..+..+    ++|.+++++|+.+....+
T Consensus        70 ~ig~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~  138 (290)
T TIGR00776        70 ALGQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRSK  138 (290)
T ss_pred             HhhhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEecc
Confidence            666777778899998887766655 8888999999999999999999    999999999999987654

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=97.70  E-value=0.0002  Score=54.80  Aligned_cols=71  Identities=15%  Similarity=0.048  Sum_probs=61.9

Q ss_pred             HHHHHHHHHHHHHHhhhhccccchhHHHHHHHHHHHHHHHHHHH--HhccccchhhHHHHHHHhhhceeeeec
Q psy1072          86 LVPLTSCFILMLSFNNLCLKNVGVAFYYVSRSLTTVFNVILTYI--LLQEKTSHLAILSCFIIFSGFALGVNQ  156 (324)
Q Consensus        86 ~~~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~p~~~~~~~~~--~~~e~~~~~~~~~~~l~~~Gv~l~~~~  156 (324)
                      ....-+++.+...+.+.+++..|++.+.-+.+..+..+.+.++.  ++||+++..++.|+.+.++|+.+...+
T Consensus        51 i~lgl~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~  123 (129)
T PRK02971         51 VLLGLAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLP  123 (129)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccC
Confidence            33334567899999999999999999999999999888888885  899999999999999999999987643

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=97.63  E-value=2e-05  Score=65.42  Aligned_cols=219  Identities=14%  Similarity=0.028  Sum_probs=148.3

Q ss_pred             CChhhhhHHHHHHHHHHHHHHHhhhhccccchhHHHHHH-HHHHHHHHHHHHHHhccccchhh----HHHHHHHhhhcee
Q psy1072          78 FDTNNMRNLVPLTSCFILMLSFNNLCLKNVGVAFYYVSR-SLTTVFNVILTYILLQEKTSHLA----ILSCFIIFSGFAL  152 (324)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l~-~~~p~~~~~~~~~~~~e~~~~~~----~~~~~l~~~Gv~l  152 (324)
                      .+.+.+..-+..|++-..+...++.|.++.++|.+.-+. .++.+-+-+++++.++|=.+..+    ..++++.++|+.+
T Consensus        54 ~T~~~~iv~~isG~~Ws~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~l  133 (288)
T COG4975          54 LTLTIFIVGFISGAFWSFGQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYL  133 (288)
T ss_pred             cchhhHHHHHHhhhHhhhhhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheE
Confidence            444555555555666668889999999999988776544 56678888999999998766554    4678888999999


Q ss_pred             eeeccCC-----CccchhhHHHHHHHHHHHHHHHHHHHHhhccCCCCceeeehhhhhhHHHHHHHHHHhhcccccccccC
Q psy1072         153 GVNQEGV-----AGSFSTLGTIYGVISSFAQALFSIHTKEVLPYVNDKIWLVSYYNNVYAVALFIPIIFICGEVSELANY  227 (324)
Q Consensus       153 ~~~~~~~-----~~~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  227 (324)
                      .++.+.+     +.++.-.|....+.|.+.|..|.++.+..    +.+.+....-+..-..+..+......+|       
T Consensus       134 Ts~~~~~nk~~~~~~n~kkgi~~L~iSt~GYv~yvvl~~~f----~v~g~saiLPqAiGMv~~ali~~~~~~~-------  202 (288)
T COG4975         134 TSKQDRNNKEEENPSNLKKGIVILLISTLGYVGYVVLFQLF----DVDGLSAILPQAIGMVIGALILGFFKME-------  202 (288)
T ss_pred             eeeeccccccccChHhhhhheeeeeeeccceeeeEeeeccc----cccchhhhhHHHHHHHHHHHHHhhcccc-------
Confidence            8766531     12223468899999999999999988765    3444444444332222222222222111       


Q ss_pred             CCcchhHHHHHHHHHHHHHHHHHHHHHHHHhccCchhhhhhccchHHHHHHHHHHHhCCCcchhhH----hHHHHHhhhh
Q psy1072         228 PHLFSFYFWILLTIGGVFGLTIGYVTSLQIQVTSPLTHNISGTAKASFHTVLATYWYSEFKPLLWW----ISNGIILSGS  303 (324)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~si~~~~~~v~~~~~~~~~~~e~~~~~~~----~G~~li~~g~  303 (324)
                       ...+.. .+.-...|+.-...|...+...++.+-.+.=..+.+--+.+.+-|+++++|+-|..++    +|+++++.|.
T Consensus       203 -~~~~K~-t~~nii~G~~Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~iGiilivvga  280 (288)
T COG4975         203 -KRFNKY-TWLNIIPGLIWAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVIIGIILIVVGA  280 (288)
T ss_pred             -cchHHH-HHHHHhhHHHHHhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhhhhHHHHHHHh
Confidence             111222 3345667777777787777777777666655566777788899999999999998874    7888888887


Q ss_pred             hheehh
Q psy1072         304 ATYALV  309 (324)
Q Consensus       304 ~~~~~~  309 (324)
                      .+....
T Consensus       281 i~lg~~  286 (288)
T COG4975         281 ILLGIA  286 (288)
T ss_pred             hhhhee
Confidence            765443

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=97.59  E-value=0.0021  Score=56.26  Aligned_cols=143  Identities=18%  Similarity=0.118  Sum_probs=92.7

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHhhccCCCCceeeehhhhhhHHHHHHHHHHhhcccccccccCCCcchhHHHHHHHHHH
Q psy1072         164 STLGTIYGVISSFAQALFSIHTKEVLPYVNDKIWLVSYYNNVYAVALFIPIIFICGEVSELANYPHLFSFYFWILLTIGG  243 (324)
Q Consensus       164 ~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  243 (324)
                      ...+....+..++.++......|+..++ ..+...........+.....+....  +.....  .. ..+ .+...+..+
T Consensus         5 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~--~~-~~~-~~~~~~~~~   77 (292)
T COG0697           5 LLLGLLALLLWGLLWGLSFIALKLAVES-LDPFLFAAALRFLIAALLLLPLLLL--EPRGLR--PA-LRP-WLLLLLLAL   77 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcc-cCChHHHHHHHHHHHHHHHHHHHHh--hccccc--cc-ccc-hHHHHHHHH
Confidence            3567888888889999999888877553 2233333343444444442222211  110011  01 111 122333333


Q ss_pred             HHHHHHHHHHHHHHhccCchhhhhhccchHHHHHHHHH-HHhCCCcchhhHhHHHHHhhhhhheehhcccc
Q psy1072         244 VFGLTIGYVTSLQIQVTSPLTHNISGTAKASFHTVLAT-YWYSEFKPLLWWISNGIILSGSATYALVKKKE  313 (324)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~a~~~si~~~~~~v~~~~~~~-~~~~e~~~~~~~~G~~li~~g~~~~~~~~~~~  313 (324)
                      +.........+..+++.++..........|++..+++. ++++|+++..++.|..+.+.|+.+.......+
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~  148 (292)
T COG0697          78 LGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGGG  148 (292)
T ss_pred             HHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCcc
Confidence            33334444445569999999999999999999999996 76799999999999999999999988765543

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.48  E-value=0.00049  Score=51.78  Aligned_cols=70  Identities=16%  Similarity=0.296  Sum_probs=61.5

Q ss_pred             HHHHHHHHHHHHHHHhhhhccccchhHHHHH-HHHHHHHHHHHHHHHhccccchhhHHHHHHHhhhceeee
Q psy1072          85 NLVPLTSCFILMLSFNNLCLKNVGVAFYYVS-RSLTTVFNVILTYILLQEKTSHLAILSCFIIFSGFALGV  154 (324)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~p~~~~~~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~  154 (324)
                      ......+++..++++...+++++|.+.+..+ .....+.+.+.+++++||+++..++.++.+.++|++..-
T Consensus        32 ~~~~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~  102 (120)
T PRK10452         32 GFILMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIK  102 (120)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhh
Confidence            3455566778889999999999999998877 468999999999999999999999999999999998754

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=97.41  E-value=0.00069  Score=58.06  Aligned_cols=81  Identities=10%  Similarity=0.117  Sum_probs=70.7

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhccCchhhhhhccchHHHHHHHHHHHhCCCcchhhHhHHHHHhhhhhheehhccc
Q psy1072         233 FYFWILLTIGGVFGLTIGYVTSLQIQVTSPLTHNISGTAKASFHTVLATYWYSEFKPLLWWISNGIILSGSATYALVKKK  312 (324)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~si~~~~~~v~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~~~~~~  312 (324)
                      +.......+.+++-.+.+...+..+++.+|.+..+....|.+++.+++.++++++++..||++..+.+.|+.+.+.....
T Consensus        14 ~~~~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~   93 (244)
T PF04142_consen   14 PKDTLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQ   93 (244)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCcc
Confidence            33345566777777778888888899999999999999999999999999999999999999999999999998876554


Q ss_pred             c
Q psy1072         313 E  313 (324)
Q Consensus       313 ~  313 (324)
                      .
T Consensus        94 ~   94 (244)
T PF04142_consen   94 S   94 (244)
T ss_pred             c
Confidence            4

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.35  E-value=0.001  Score=50.08  Aligned_cols=58  Identities=10%  Similarity=0.061  Sum_probs=45.5

Q ss_pred             HHHhccCchh-hhhhccchHHHHHHHHHHHhCCCcchhhHhHHHHHhhhhhheehhccc
Q psy1072         255 LQIQVTSPLT-HNISGTAKASFHTVLATYWYSEFKPLLWWISNGIILSGSATYALVKKK  312 (324)
Q Consensus       255 ~~~~~~~a~~-~si~~~~~~v~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~~~~~~  312 (324)
                      ..+|+.+-.. .++..-+..+...++|+++|||++|+.+++|+.+++.|+...+...++
T Consensus        49 ~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~~~  107 (120)
T PRK10452         49 FAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGTRK  107 (120)
T ss_pred             HHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCCCC
Confidence            4467666544 333345677888999999999999999999999999999988765543

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=97.31  E-value=0.0014  Score=48.71  Aligned_cols=68  Identities=15%  Similarity=0.225  Sum_probs=59.0

Q ss_pred             HHHHHHHHHHHHHhhhhccccchhHHHHH-HHHHHHHHHHHHHHHhccccchhhHHHHHHHhhhceeee
Q psy1072          87 VPLTSCFILMLSFNNLCLKNVGVAFYYVS-RSLTTVFNVILTYILLQEKTSHLAILSCFIIFSGFALGV  154 (324)
Q Consensus        87 ~~~~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~p~~~~~~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~  154 (324)
                      ...-+++..+..+...+++..|.+.+..+ .....+.+.+.+++++||+++..++.++.+.++|++..-
T Consensus        34 i~~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~  102 (110)
T PRK09541         34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVIN  102 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence            34455677888888899999999998877 457889999999999999999999999999999998764

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=97.26  E-value=0.0017  Score=57.35  Aligned_cols=120  Identities=18%  Similarity=0.132  Sum_probs=82.4

Q ss_pred             chhhHHHHHHHHHHHHHHHHHHHHhhccCCCCceeeehhhhhhHHHHHHHHHHhhcccccccccCCCcchhHHHHHHHHH
Q psy1072         163 FSTLGTIYGVISSFAQALFSIHTKEVLPYVNDKIWLVSYYNNVYAVALFIPIIFICGEVSELANYPHLFSFYFWILLTIG  242 (324)
Q Consensus       163 ~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~  242 (324)
                      ....|..+++.|+++.+...+++|+-.++.+.++.+-.  .                +.     .+...++.+|..+. .
T Consensus         4 ~~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~~~~~~~--~----------------~~-----~~~l~~~~W~~G~~-~   59 (300)
T PF05653_consen    4 DFYIGVLLAVVSSIFIAVGFNLQKKSHLRLPRGSLRAG--S----------------GG-----RSYLRRPLWWIGLL-L   59 (300)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccc--c----------------hh-----hHHHhhHHHHHHHH-H
Confidence            45689999999999999999999987554332111100  0                00     00112333343332 2


Q ss_pred             HHHHHHHHHHHHHHHhccCchhhhhhccchHHHHHHHHHHHhCCCcchhhHhHHHHHhhhhhheehh
Q psy1072         243 GVFGLTIGYVTSLQIQVTSPLTHNISGTAKASFHTVLATYWYSEFKPLLWWISNGIILSGSATYALV  309 (324)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~a~~~si~~~~~~v~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~~~  309 (324)
                      -..+.+.++   .+....++...+-++.+.-+...+++..+++|+++..+++|..+++.|..+....
T Consensus        60 ~~~g~~~~~---~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~  123 (300)
T PF05653_consen   60 MVLGEILNF---VALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIF  123 (300)
T ss_pred             HhcchHHHH---HHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEe
Confidence            233334333   3466778888888888999999999999999999999999999999998875543

>KOG4510|consensus

Probab=97.24  E-value=0.00023  Score=59.93  Aligned_cols=135  Identities=13%  Similarity=0.063  Sum_probs=90.4

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhhccCCCCceeeehhhhhhHHHHHHHHHHhhcccccccccCCCcchhHHHHHHHHHHHH
Q psy1072         166 LGTIYGVISSFAQALFSIHTKEVLPYVNDKIWLVSYYNNVYAVALFIPIIFICGEVSELANYPHLFSFYFWILLTIGGVF  245 (324)
Q Consensus       166 ~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (324)
                      .|..+...| ..+....+..++...   .+|.+......+.-.+...|..+....+  .+.-+.   .+  .+++.=|+.
T Consensus        38 ~gl~l~~vs-~ff~~~~vv~t~~~e---~~p~e~a~~r~l~~mlit~pcliy~~~~--v~gp~g---~R--~~LiLRg~m  106 (346)
T KOG4510|consen   38 LGLLLLTVS-YFFNSCMVVSTKVLE---NDPMELASFRLLVRMLITYPCLIYYMQP--VIGPEG---KR--KWLILRGFM  106 (346)
T ss_pred             cCceehhhH-HHHhhHHHhhhhhhc---cChhHhhhhhhhhehhhhheEEEEEeee--eecCCC---cE--EEEEeehhh
Confidence            688888888 555555666666543   2344555544333334444444443121  111111   11  113345556


Q ss_pred             HHHHHHHHHHHHhccCchhhhhhccchHHHHHHHHHHHhCCCcchhhHhHHHHHhhhhhheehhcc
Q psy1072         246 GLTIGYVTSLQIQVTSPLTHNISGTAKASFHTVLATYWYSEFKPLLWWISNGIILSGSATYALVKK  311 (324)
Q Consensus       246 ~~~~~~~~~~~~~~~~a~~~si~~~~~~v~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~~~~~  311 (324)
                      |+..-+..|+..++.+-..+.+.....|++++++++.+++|+.|..+.+|..+.+.|+.+..++.-
T Consensus       107 G~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpF  172 (346)
T KOG4510|consen  107 GFTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPF  172 (346)
T ss_pred             hhhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCc
Confidence            665666677778888888889999999999999999999999999999999999999999887654

>PRK11431 multidrug efflux system protein; Provisional

Probab=97.19  E-value=0.0069  Score=44.49  Aligned_cols=71  Identities=20%  Similarity=0.225  Sum_probs=59.1

Q ss_pred             hhHHHHHHHHHHHHHHHhhhhccccchhHHHHHH-HHHHHHHHHHHHHHhccccchhhHHHHHHHhhhceee
Q psy1072          83 MRNLVPLTSCFILMLSFNNLCLKNVGVAFYYVSR-SLTTVFNVILTYILLQEKTSHLAILSCFIIFSGFALG  153 (324)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l~-~~~p~~~~~~~~~~~~e~~~~~~~~~~~l~~~Gv~l~  153 (324)
                      +........++..+.++-..+++.+|.+++..+- ..-.+.+.+.+++++||+++..++.++.+.++|++..
T Consensus        29 ~~~~~~~i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l  100 (105)
T PRK11431         29 LTPSIITVTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGL  100 (105)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhh
Confidence            3334444566778888888999999999876555 4778999999999999999999999999999999865

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=97.14  E-value=0.013  Score=43.25  Aligned_cols=69  Identities=9%  Similarity=0.174  Sum_probs=57.2

Q ss_pred             HHHHHHHHHHHHHHHhhhhccccchhHHHHHH-HHHHHHHHHHHHHHhccccchhhHHHHHHHhhhceee
Q psy1072          85 NLVPLTSCFILMLSFNNLCLKNVGVAFYYVSR-SLTTVFNVILTYILLQEKTSHLAILSCFIIFSGFALG  153 (324)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l~-~~~p~~~~~~~~~~~~e~~~~~~~~~~~l~~~Gv~l~  153 (324)
                      .......++..+.++-..++++.|.+.+..+- ..-.+.+.+.+.+++||+++..++.++.+.+.|++..
T Consensus        37 ~~~~~~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~l  106 (109)
T PRK10650         37 YGILSLAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMI  106 (109)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHh
Confidence            34444556677888888999999999876554 5778899999999999999999999999999999753

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=96.99  E-value=0.0038  Score=46.32  Aligned_cols=56  Identities=13%  Similarity=0.036  Sum_probs=44.5

Q ss_pred             HHHhccCchh-hhhhccchHHHHHHHHHHHhCCCcchhhHhHHHHHhhhhhheehhc
Q psy1072         255 LQIQVTSPLT-HNISGTAKASFHTVLATYWYSEFKPLLWWISNGIILSGSATYALVK  310 (324)
Q Consensus       255 ~~~~~~~a~~-~si~~~~~~v~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~~~~  310 (324)
                      .++|+.+-.. .++-.-+..+...+.|+++|||++|+.+++|+.+++.|+...+..+
T Consensus        49 ~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~~  105 (110)
T PRK09541         49 QTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLLS  105 (110)
T ss_pred             HHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            3467766544 3333556778889999999999999999999999999999977644

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=96.96  E-value=0.0044  Score=45.13  Aligned_cols=71  Identities=17%  Similarity=0.211  Sum_probs=58.6

Q ss_pred             hhHHHHHHHHHHHHHHHhhhhccccchhHHH-HHHHHHHHHHHHHHHHHhccccchhhHHHHHHHhhhceee
Q psy1072          83 MRNLVPLTSCFILMLSFNNLCLKNVGVAFYY-VSRSLTTVFNVILTYILLQEKTSHLAILSCFIIFSGFALG  153 (324)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~-~l~~~~p~~~~~~~~~~~~e~~~~~~~~~~~l~~~Gv~l~  153 (324)
                      ....+..-+++..+..+...+++++|.+++. +-...-.+.+.+.+++++||+.+..++.++.+.++|++..
T Consensus        30 ~~~~il~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~L  101 (106)
T COG2076          30 LWPSILTIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGL  101 (106)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHh
Confidence            3344444566778888888999999999865 4556678999999999999999999999999999999764

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=96.95  E-value=0.015  Score=45.10  Aligned_cols=131  Identities=13%  Similarity=0.198  Sum_probs=89.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhccCCCCceeeehhhhhhHHHHHHHHHHhhcccccccccCCCcchhHHHHHHHHHHHHHH
Q psy1072         168 TIYGVISSFAQALFSIHTKEVLPYVNDKIWLVSYYNNVYAVALFIPIIFICGEVSELANYPHLFSFYFWILLTIGGVFGL  247 (324)
Q Consensus       168 ~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (324)
                      .++++.+...-+.+.....++.++.+ +|+..++.+...+.+.+..+....++. +..+..  ..| .|.  ...|+++.
T Consensus         3 ~lla~~aG~~i~~q~~~N~~L~~~~g-s~~~as~i~~~~G~i~~~i~~~~~~~~-~~~~~~--~~p-~w~--~lGG~lG~   75 (138)
T PF04657_consen    3 ILLALLAGALIALQAAFNGQLGKALG-SPLVASFISFGVGFILLLIILLITGRP-SLASLS--SVP-WWA--YLGGLLGV   75 (138)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhC-ccHHHHHHHHHHHHHHHHHHHHHhccc-ccchhc--cCC-hHH--hccHHHHH
Confidence            45677777777777777766655433 578888888888998888888877554 222111  112 132  23788888


Q ss_pred             HHHHHHHHHHhccCchhhhhhccc-hHHHHHHHHHH-Hh---CCCcchhhHhHHHHHhhhhhh
Q psy1072         248 TIGYVTSLQIQVTSPLTHNISGTA-KASFHTVLATY-WY---SEFKPLLWWISNGIILSGSAT  305 (324)
Q Consensus       248 ~~~~~~~~~~~~~~a~~~si~~~~-~~v~~~~~~~~-~~---~e~~~~~~~~G~~li~~g~~~  305 (324)
                      ..-+......++.++......... +-+.+.+++.+ +|   ++++++..++|.++++.|+.+
T Consensus        76 ~~V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen   76 FFVLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL  138 (138)
T ss_pred             HHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence            887777778888888876665444 44455666654 33   356899999999999999863

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=96.75  E-value=0.006  Score=43.90  Aligned_cols=57  Identities=19%  Similarity=0.169  Sum_probs=34.9

Q ss_pred             HHHHHHHHHHHhhhhccccchhHHHHH-HHHHHHHHHHHHHHHhccccchhhHHHHHH
Q psy1072          89 LTSCFILMLSFNNLCLKNVGVAFYYVS-RSLTTVFNVILTYILLQEKTSHLAILSCFI  145 (324)
Q Consensus        89 ~~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~p~~~~~~~~~~~~e~~~~~~~~~~~l  145 (324)
                      ...++..+..+...++++.|.+.+..+ .....+.+.+.+.+++||+++..++.++.+
T Consensus        35 ~~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~l   92 (93)
T PF00893_consen   35 AVVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGL   92 (93)
T ss_dssp             HHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheee
Confidence            334677888899999999999998554 569999999999999999999999999875

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=96.55  E-value=0.0097  Score=50.06  Aligned_cols=65  Identities=15%  Similarity=0.162  Sum_probs=55.9

Q ss_pred             HHHHHHH-HHHHHHhhhhccccchhHHHHHHHHHHHHHHHHHHHHhccccchhhHHHHHHHhhhce
Q psy1072          87 VPLTSCF-ILMLSFNNLCLKNVGVAFYYVSRSLTTVFNVILTYILLQEKTSHLAILSCFIIFSGFA  151 (324)
Q Consensus        87 ~~~~~~~-~~~~~~~~~al~~~~~~~~~~l~~~~p~~~~~~~~~~~~e~~~~~~~~~~~l~~~Gv~  151 (324)
                      +..+++. .+-..+...+++..|..++.++.++.|.+.++.++++++|+++..||.++...+.+.+
T Consensus       213 LgvavlSSalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsa  278 (292)
T COG5006         213 LGVAVLSSALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASA  278 (292)
T ss_pred             HHHHHHhcccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHh
Confidence            3344443 4667788899999999999999999999999999999999999999999988877665

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=96.55  E-value=0.013  Score=42.76  Aligned_cols=55  Identities=15%  Similarity=0.102  Sum_probs=44.4

Q ss_pred             HHHhccCch-hhhhhccchHHHHHHHHHHHhCCCcchhhHhHHHHHhhhhhheehh
Q psy1072         255 LQIQVTSPL-THNISGTAKASFHTVLATYWYSEFKPLLWWISNGIILSGSATYALV  309 (324)
Q Consensus       255 ~~~~~~~a~-~~si~~~~~~v~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~~~  309 (324)
                      ..+|+.+-. ..++-.-.-.+...+.|+++|||++|+.+++|+.+++.|+...+..
T Consensus        49 ~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~~  104 (106)
T COG2076          49 LALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKLG  104 (106)
T ss_pred             HHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhhc
Confidence            346776544 3455567777888999999999999999999999999999886654

>PRK13499 rhamnose-proton symporter; Provisional

Probab=96.48  E-value=0.014  Score=52.32  Aligned_cols=141  Identities=15%  Similarity=0.080  Sum_probs=87.5

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHhhccCCCCceeeehhhhhhHHHHHHHHHHh-hcccccccccCCCcchhHHHHHHHHH
Q psy1072         164 STLGTIYGVISSFAQALFSIHTKEVLPYVNDKIWLVSYYNNVYAVALFIPIIF-ICGEVSELANYPHLFSFYFWILLTIG  242 (324)
Q Consensus       164 ~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~  242 (324)
                      ...|+++++++++|++.+.+=+|| .++   -++|........-.-++.|+.. ..++ +...+.-...++..+...++.
T Consensus         5 ~~~G~~~~~i~~~~~GS~~~p~K~-~k~---w~wE~~W~v~gi~~wl~~~~~~g~~~~-~~f~~~~~~~~~~~~~~~~l~   79 (345)
T PRK13499          5 IILGIIWHLIGGASSGSFYAPFKK-VKK---WSWETMWSVGGIFSWLILPWLIAALLL-PDFWAYYSSFSGSTLLPVFLF   79 (345)
T ss_pred             hHHHHHHHHHHHHHhhcccccccc-cCC---CchhHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHhcCHHHHHHHHHH
Confidence            357999999999999999988887 332   3345442211111112222111 1112 111111112345557777788


Q ss_pred             HHHHHHHHHHHHHHHhccCch-hhhhhccchHHHHHHHHHHHhCCCc---c----hhhHhHHHHHhhhhhheehh
Q psy1072         243 GVFGLTIGYVTSLQIQVTSPL-THNISGTAKASFHTVLATYWYSEFK---P----LLWWISNGIILSGSATYALV  309 (324)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~a~-~~si~~~~~~v~~~~~~~~~~~e~~---~----~~~~~G~~li~~g~~~~~~~  309 (324)
                      |++-..-+......+|+.+-. ...+..-+.-+...+++.+++||-.   +    ....+|.+++++|+.+..+.
T Consensus        80 G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~A  154 (345)
T PRK13499         80 GALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRA  154 (345)
T ss_pred             HHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHh
Confidence            888777777777777776543 4555566778888888999998643   2    23578999999999998873

>PRK11431 multidrug efflux system protein; Provisional

Probab=96.37  E-value=0.029  Score=41.23  Aligned_cols=54  Identities=11%  Similarity=-0.005  Sum_probs=44.1

Q ss_pred             HHHhccCch-hhhhhccchHHHHHHHHHHHhCCCcchhhHhHHHHHhhhhhheeh
Q psy1072         255 LQIQVTSPL-THNISGTAKASFHTVLATYWYSEFKPLLWWISNGIILSGSATYAL  308 (324)
Q Consensus       255 ~~~~~~~a~-~~si~~~~~~v~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~~  308 (324)
                      .++|+.+.. ..++-.-+..+...+.|+++|||++|+.+++|+.+++.|+...+.
T Consensus        48 ~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l  102 (105)
T PRK11431         48 WAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLKL  102 (105)
T ss_pred             HHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhc
Confidence            446666544 355566678888899999999999999999999999999988654

>KOG2234|consensus

Probab=96.25  E-value=0.076  Score=47.09  Aligned_cols=142  Identities=7%  Similarity=0.013  Sum_probs=89.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhccCC--CCceeeehhhhhhHHHHHHHHHHhhcccc---cccccC---CCcchhHHHHHH
Q psy1072         168 TIYGVISSFAQALFSIHTKEVLPYV--NDKIWLVSYYNNVYAVALFIPIIFICGEV---SELANY---PHLFSFYFWILL  239 (324)
Q Consensus       168 ~~~~l~s~~~~a~~~v~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~g~~---~~~~~~---~~~~~~~~~~~~  239 (324)
                      .+..+...+-++......|...++.  +..+....+..-+.-.++.......- +.   ....+.   ..+..+....-+
T Consensus        17 ~~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~-~~~~~~~~~~~l~~~i~~~~~~~lk~   95 (345)
T KOG2234|consen   17 YLSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFE-ERKYAKKSLKSLSKEILAAPRETLKV   95 (345)
T ss_pred             HHHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHH-hhHHhhhhhhhcCHHHHhChHHHHHH
Confidence            3333444444444454555443332  23444555555444444444443331 21   111111   011233233445


Q ss_pred             HHHHHHHHHHHHHHHHHHhccCchhhhhhccchHHHHHHHHHHHhCCCcchhhHhHHHHHhhhhhheehhc
Q psy1072         240 TIGGVFGLTIGYVTSLQIQVTSPLTHNISGTAKASFHTVLATYWYSEFKPLLWWISNGIILSGSATYALVK  310 (324)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~a~~~si~~~~~~v~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~~~~  310 (324)
                      .+..++-.+-|...+....+.+|.+.++...++...+.+++.++++++++..||...++...|+...+...
T Consensus        96 ~vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~  166 (345)
T KOG2234|consen   96 SVPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPS  166 (345)
T ss_pred             HHHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccC
Confidence            55666666777666677999999999999999999999999999999999999999999999999988443

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=96.21  E-value=0.02  Score=42.47  Aligned_cols=70  Identities=21%  Similarity=0.219  Sum_probs=57.0

Q ss_pred             hhHHHHHHHHHHHHHHHhhhhccccchhHHHHH-HHHHHHHHHHHHHHHhccccchhhHHHHHHHhhhceee
Q psy1072          83 MRNLVPLTSCFILMLSFNNLCLKNVGVAFYYVS-RSLTTVFNVILTYILLQEKTSHLAILSCFIIFSGFALG  153 (324)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~p~~~~~~~~~~~~e~~~~~~~~~~~l~~~Gv~l~  153 (324)
                      ++...|..+-. .+...+++.+...+.|.+.-+ ++++-+++++.++++.+|..+++.+.|+.+.+.|+.+.
T Consensus        42 ~~y~ipf~lNq-~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc  112 (113)
T PF10639_consen   42 PKYIIPFLLNQ-SGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC  112 (113)
T ss_pred             HHHHHHHHHHH-HHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence            55666555444 445666788889999888877 59999999999998888888999999999999999874

Many members are annotated as potential transmembrane proteins.

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=96.20  E-value=0.035  Score=41.01  Aligned_cols=53  Identities=9%  Similarity=0.029  Sum_probs=42.2

Q ss_pred             HHHhccCchh-hhhhccchHHHHHHHHHHHhCCCcchhhHhHHHHHhhhhhhee
Q psy1072         255 LQIQVTSPLT-HNISGTAKASFHTVLATYWYSEFKPLLWWISNGIILSGSATYA  307 (324)
Q Consensus       255 ~~~~~~~a~~-~si~~~~~~v~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~  307 (324)
                      .++|+.+..+ .++-.-+..+...+.|+++|||++|+.+++|+.+++.|+...+
T Consensus        54 ~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lk  107 (109)
T PRK10650         54 QAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIK  107 (109)
T ss_pred             HHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence            3466665443 4555666777888999999999999999999999999998754

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=96.10  E-value=0.43  Score=37.00  Aligned_cols=120  Identities=13%  Similarity=0.115  Sum_probs=83.6

Q ss_pred             HHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhhCCCCCcCCCCCCCChhhhhHHHHHHHHHHHHHHHhhh
Q psy1072          23 ITTIFLNKTLLSELQLDAPIFVTWYQCLVSAIICFVLCQLSQQYPKNFSFPYGNPFDTNNMRNLVPLTSCFILMLSFNNL  102 (324)
Q Consensus        23 ~~~~~~~K~~l~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  102 (324)
                      .....+|-.+-+..+  .|..-++.-+..+.+.+.++....+..    +.+   ..+ +..++....|++......+...
T Consensus        14 ~~q~~~N~~L~~~~g--s~~~as~i~~~~G~i~~~i~~~~~~~~----~~~---~~~-~~p~w~~lGG~lG~~~V~~~~~   83 (138)
T PF04657_consen   14 ALQAAFNGQLGKALG--SPLVASFISFGVGFILLLIILLITGRP----SLA---SLS-SVPWWAYLGGLLGVFFVLSNII   83 (138)
T ss_pred             HHHHHHHHHHHHHhC--ccHHHHHHHHHHHHHHHHHHHHHhccc----ccc---hhc-cCChHHhccHHHHHHHHHHHHH
Confidence            344445666555543  588889999999988888887775522    112   122 2223334477888888888899


Q ss_pred             hccccchhHHHHHHHH-HHHHHHHHHHH----HhccccchhhHHHHHHHhhhcee
Q psy1072         103 CLKNVGVAFYYVSRSL-TTVFNVILTYI----LLQEKTSHLAILSCFIIFSGFAL  152 (324)
Q Consensus       103 al~~~~~~~~~~l~~~-~p~~~~~~~~~----~~~e~~~~~~~~~~~l~~~Gv~l  152 (324)
                      +....+++....+.-+ +.+...+++.+    .-|++++..+..++.+.++|+.+
T Consensus        84 ~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen   84 LVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL  138 (138)
T ss_pred             HhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence            9999888877766544 46666777774    24677999999999999999864

>TIGR00803 nst UDP-galactose transporter

Probab=96.00  E-value=0.19  Score=42.38  Aligned_cols=67  Identities=10%  Similarity=0.010  Sum_probs=58.1

Q ss_pred             HHHHHHHHHHHHHHhhhhccccchhHHHHHHHHHHHHHHHHHHHHhccccchhhHHHHHHHhhhcee
Q psy1072          86 LVPLTSCFILMLSFNNLCLKNVGVAFYYVSRSLTTVFNVILTYILLQEKTSHLAILSCFIIFSGFAL  152 (324)
Q Consensus        86 ~~~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~p~~~~~~~~~~~~e~~~~~~~~~~~l~~~Gv~l  152 (324)
                      .+...+.......+-...++|.+....+....+.++++.+++.++++|+++..++.+..+.+.|+.+
T Consensus       155 ~~~~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l  221 (222)
T TIGR00803       155 VWIVGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL  221 (222)
T ss_pred             HHHHHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence            3344455566667788899999999999999999999999999999999999999999999998764

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>KOG2765|consensus

Probab=95.62  E-value=0.039  Score=49.17  Aligned_cols=79  Identities=14%  Similarity=0.039  Sum_probs=68.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhccCchhhhhhccchHHHHHHHHHHHhCCCcchhhHhHHHHHhhhhhheehhccccc
Q psy1072         236 WILLTIGGVFGLTIGYVTSLQIQVTSPLTHNISGTAKASFHTVLATYWYSEFKPLLWWISNGIILSGSATYALVKKKEL  314 (324)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~si~~~~~~v~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~~~~~~~~  314 (324)
                      -...+..|.+-+..+|....++++++.....++.....+++..+|.++-+|++|+...++..+.+.|+++.+..+.+.+
T Consensus       159 ak~sl~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~~  237 (416)
T KOG2765|consen  159 AKLSLFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQN  237 (416)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEecccccc
Confidence            3445666777788888888889999999999999999999999999999999999999999999999999887755443

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=95.49  E-value=0.044  Score=39.38  Aligned_cols=45  Identities=16%  Similarity=0.243  Sum_probs=24.2

Q ss_pred             HHHhccCchhh-hhhccchHHHHHHHHHHHhCCCcchhhHhHHHHH
Q psy1072         255 LQIQVTSPLTH-NISGTAKASFHTVLATYWYSEFKPLLWWISNGII  299 (324)
Q Consensus       255 ~~~~~~~a~~~-si~~~~~~v~~~~~~~~~~~e~~~~~~~~G~~li  299 (324)
                      .++|+.+...+ .+..-+..+...+.|.++|||++|+.+++|+.++
T Consensus        48 ~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI   93 (93)
T PF00893_consen   48 LALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI   93 (93)
T ss_dssp             HHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred             HHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence            45788776654 5556678889999999999999999999999875

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=94.79  E-value=0.21  Score=43.15  Aligned_cols=83  Identities=12%  Similarity=0.036  Sum_probs=60.1

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhccCchhhh-hhccchHHHHHHHHHHHhCCCcchhhH----hHHHHHhhhhhhee
Q psy1072         233 FYFWILLTIGGVFGLTIGYVTSLQIQVTSPLTHN-ISGTAKASFHTVLATYWYSEFKPLLWW----ISNGIILSGSATYA  307 (324)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~s-i~~~~~~v~~~~~~~~~~~e~~~~~~~----~G~~li~~g~~~~~  307 (324)
                      +..+...+++|++-.+-+...+...++.+-+++- +..-++-+...++|+++|||--+..++    ++.+++++|+.+.+
T Consensus        42 ~~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts  121 (269)
T PF06800_consen   42 GTSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTS  121 (269)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhc
Confidence            4556677888888777777777666665544333 334567777889999999998776654    47788999999988


Q ss_pred             hhcccccc
Q psy1072         308 LVKKKELD  315 (324)
Q Consensus       308 ~~~~~~~~  315 (324)
                      +.++++++
T Consensus       122 ~~~~~~~~  129 (269)
T PF06800_consen  122 YQDKKSDK  129 (269)
T ss_pred             cccccccc
Confidence            87666554

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>KOG1441|consensus

Probab=94.61  E-value=0.093  Score=46.52  Aligned_cols=139  Identities=14%  Similarity=0.181  Sum_probs=97.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHh--cCCCCchHHHHHHHHHHHHHHHH-HHHHHhhhCCCCC-c-CCCCCCCChhhhh
Q psy1072          10 NIIFVVALYWCVSITTIFLNKTLLS--ELQLDAPIFVTWYQCLVSAIICF-VLCQLSQQYPKNF-S-FPYGNPFDTNNMR   84 (324)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~K~~l~--~~~~~~p~~l~~~r~~~~~~~l~-~~~~~~~~~~~~~-~-~~~~~~~~~~~~~   84 (324)
                      .-...+..+......-..+.|..+.  ..+. .++.+...+.-++...+. ++.....  +... . ..  .+.+.. ..
T Consensus       163 ~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~-~~~~ll~y~ap~s~~~Ll~P~~~~~~--~~~~~~~~~--~~~~~~-~~  236 (316)
T KOG1441|consen  163 FGFISAMISNLAFALRNILSKKLLTSKGESL-NSMNLLYYTAPISLIFLLIPFLDYVE--GNKFVGFLT--APWFVT-FL  236 (316)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhcccccc-CchHHHHHhhhHHHHHHhcchHhhhc--ccceeeeec--cccchh-hH
Confidence            3344445555555566667777773  4456 377788878888877777 6543321  1100 0 01  122333 33


Q ss_pred             HHHHHHHHHHHHHHHhhhhccccchhHHHHHHHHHHHHHHHHHHHHhccccchhhHHHHHHHhhhceeee
Q psy1072          85 NLVPLTSCFILMLSFNNLCLKNVGVAFYYVSRSLTTVFNVILTYILLQEKTSHLAILSCFIIFSGFALGV  154 (324)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~p~~~~~~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~  154 (324)
                      .+...+++....+...+..+..+|+-++++.....-..+...++++++|+.+..+..|..++++|+.+-.
T Consensus       237 ~~~~~sv~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~  306 (316)
T KOG1441|consen  237 ILLLNSVLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYS  306 (316)
T ss_pred             HHHHHHHHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHH
Confidence            4444457777888888999999999999999999999999999999999999999999999999998754

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=94.01  E-value=0.61  Score=36.47  Aligned_cols=138  Identities=12%  Similarity=0.095  Sum_probs=84.7

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHhhccCCCCceeeehhhhhhHHHHHHHHHHhhcccccccccCCCcchhHHHHHHHHHHH
Q psy1072         165 TLGTIYGVISSFAQALFSIHTKEVLPYVNDKIWLVSYYNNVYAVALFIPIIFICGEVSELANYPHLFSFYFWILLTIGGV  244 (324)
Q Consensus       165 ~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  244 (324)
                      +...+.++.+.++-..+.-...++.+..+ +|.--++.....+++.+..+.... +....+.. ....|  | +..+.|+
T Consensus         4 ~l~ll~~i~aG~~l~~Q~~iN~qL~~~~~-spl~As~isf~vGt~~L~~l~l~~-~~~~~~a~-~~~~p--w-W~~~GG~   77 (150)
T COG3238           4 YLYLLFAILAGALLPLQAAINGRLARYLG-SPLLASLISFLVGTVLLLILLLIK-QGHPGLAA-VASAP--W-WAWIGGL   77 (150)
T ss_pred             HHHHHHHHHHhhhhhhHHHHHHHHHHHcC-ChHHHHHHHHHHHHHHHHHHHHHh-cCCCchhh-ccCCc--h-HHHHccc
Confidence            35667777778777777776666655433 567777777778888887777764 33222221 11122  2 2334566


Q ss_pred             HHHHHHHHHHHHHhccCchhhhh-hccchHHHHHHHHHHHh-C---CCcchhhHhHHHHHhhhhhheeh
Q psy1072         245 FGLTIGYVTSLQIQVTSPLTHNI-SGTAKASFHTVLATYWY-S---EFKPLLWWISNGIILSGSATYAL  308 (324)
Q Consensus       245 ~~~~~~~~~~~~~~~~~a~~~si-~~~~~~v~~~~~~~~~~-~---e~~~~~~~~G~~li~~g~~~~~~  308 (324)
                      ++..+-........+.++++.-. .-.-+-+.+.+++.+=+ |   .+++...++|+++++.|+++..+
T Consensus        78 lGa~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~~  146 (150)
T COG3238          78 LGAIFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLARR  146 (150)
T ss_pred             hhhhhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhcc
Confidence            66666555555566666654433 34445555566654433 2   45899999999999999666443

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=93.90  E-value=0.044  Score=46.04  Aligned_cols=136  Identities=11%  Similarity=0.097  Sum_probs=84.4

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhhccCCCCceeeehhhhhhHHHHHHHHHHhhcccccccccCCCcchhHHHHHHHHHHHH
Q psy1072         166 LGTIYGVISSFAQALFSIHTKEVLPYVNDKIWLVSYYNNVYAVALFIPIIFICGEVSELANYPHLFSFYFWILLTIGGVF  245 (324)
Q Consensus       166 ~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (324)
                      .+++++++=++.|+.......|.    +-+|.+-..-+ -.+++++....+..-++        ..+...+..-+.+|.+
T Consensus         2 ~~~liaL~P~l~WGsip~v~~k~----GG~p~qQ~lGt-T~GALifaiiv~~~~~p--------~~T~~~~iv~~isG~~   68 (288)
T COG4975           2 MDLLIALLPALGWGSIPLVANKF----GGKPYQQTLGT-TLGALIFAIIVFLFVSP--------ELTLTIFIVGFISGAF   68 (288)
T ss_pred             hhHHHHHHHHHHhcccceeeeec----CCChhHhhhhc-cHHHHHHHHHHheeecC--------ccchhhHHHHHHhhhH
Confidence            35678888889998887766655    33333333332 23444443333332111        1233345566777777


Q ss_pred             HHHHHHHHHHHHhccCchhhhh-hccchHHHHHHHHHHHhCCCcchhhH----hHHHHHhhhhhheehhccccc
Q psy1072         246 GLTIGYVTSLQIQVTSPLTHNI-SGTAKASFHTVLATYWYSEFKPLLWW----ISNGIILSGSATYALVKKKEL  314 (324)
Q Consensus       246 ~~~~~~~~~~~~~~~~a~~~si-~~~~~~v~~~~~~~~~~~e~~~~~~~----~G~~li~~g~~~~~~~~~~~~  314 (324)
                      -...+...+...+..+.+.+.- ..-.+-+-+.++|++.|+|-.++.+.    +..++++.|+++.++.++.++
T Consensus        69 Ws~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~~nk  142 (288)
T COG4975          69 WSFGQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDRNNK  142 (288)
T ss_pred             hhhhhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeeccccc
Confidence            7777777777766655444333 34457777889999999998877664    456688999999887765443

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=93.66  E-value=1.7  Score=36.26  Aligned_cols=130  Identities=13%  Similarity=0.199  Sum_probs=90.3

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhh-hCCCCCcCCCCCCCChhhhhHHHHHHHHHHHH
Q psy1072          18 YWCVSITTIFLNKTLLSELQLDAPIFVTWYQCLVSAIICFVLCQLSQ-QYPKNFSFPYGNPFDTNNMRNLVPLTSCFILM   96 (324)
Q Consensus        18 ~~~~~~~~~~~~K~~l~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   96 (324)
                      -+.++....+..|.-.+..+| ....-.++.-+.+..++..+..... +.|+  .+.  ..++.+....+...|++.++.
T Consensus       163 NclssaafVL~mrkri~ltNf-~d~dtmfYnNllslPiL~~~s~~~edws~~--n~a--nnl~~d~l~am~ISgl~svgi  237 (309)
T COG5070         163 NCLSSAAFVLIMRKRIKLTNF-KDFDTMFYNNLLSLPILLSFSFLFEDWSPG--NLA--NNLSVDSLMAMFISGLCSVGI  237 (309)
T ss_pred             hhHhHHHHHHHHHHhhccccc-chhhHHHHhhhHHHHHHHHHHHHhccCCcc--hhh--cCCChHHHHHHHHHHHHHhhh
Confidence            344444445555555444445 3455667777777777766655432 2111  111  234555677888889999988


Q ss_pred             HHHhhhhccccchhHHHHHHHHHHHHHHHHHHHHhccccchhhHHHHHHHhhhcee
Q psy1072          97 LSFNNLCLKNVGVAFYYVSRSLTTVFNVILTYILLQEKTSHLAILSCFIIFSGFAL  152 (324)
Q Consensus        97 ~~~~~~al~~~~~~~~~~l~~~~p~~~~~~~~~~~~e~~~~~~~~~~~l~~~Gv~l  152 (324)
                      .++.-++++-++...++....+.-...++.+.+++.|+.++..+.++.++++..++
T Consensus       238 Sy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~i  293 (309)
T COG5070         238 SYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAI  293 (309)
T ss_pred             hhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999888888888888888888888887776665444

>KOG1581|consensus

Probab=93.50  E-value=0.65  Score=40.48  Aligned_cols=120  Identities=16%  Similarity=0.224  Sum_probs=85.5

Q ss_pred             HHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhhCCCCCcCCCCCCCChhhhhHHHHHHHHHHHHHHHhhhhccccc
Q psy1072          29 NKTLLSELQLDAPIFVTWYQCLVSAIICFVLCQLSQQYPKNFSFPYGNPFDTNNMRNLVPLTSCFILMLSFNNLCLKNVG  108 (324)
Q Consensus        29 ~K~~l~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~  108 (324)
                      .+-++.+++. .+..+.+.-.++..+.........+......++   ...+.+-+++++..+.+.+.+..+-++-++.-+
T Consensus       191 Qd~lf~~~k~-s~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F---~~~hp~~~~Di~l~s~~gavGQ~FI~~TI~~FG  266 (327)
T KOG1581|consen  191 QDSLFKKYKV-SSLHMMFGVNLFSAILNGTYLILQGHLLPAVSF---IKEHPDVAFDILLYSTCGAVGQLFIFYTIERFG  266 (327)
T ss_pred             HHHHhccCCc-cHhHHHHHHHHHHHHHHHHhhhcCCCCchHHHH---HHcChhHHHHHHHHHHhhhhhhheehhhHhhcc
Confidence            3555566555 455555555555555555543322111111111   123557788999999999999998888888877


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHhccccchhhHHHHHHHhhhcee
Q psy1072         109 VAFYYVSRSLTTVFNVILTYILLQEKTSHLAILSCFIIFSGFAL  152 (324)
Q Consensus       109 ~~~~~~l~~~~p~~~~~~~~~~~~e~~~~~~~~~~~l~~~Gv~l  152 (324)
                      +-+.+.+..+==++...++.+.++++.++.+|.++.+.+.|+.+
T Consensus       267 slt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l  310 (327)
T KOG1581|consen  267 SLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFL  310 (327)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHH
Confidence            77888888888999999999999999999999999988888765

>KOG2922|consensus

Probab=93.05  E-value=0.022  Score=49.74  Aligned_cols=127  Identities=18%  Similarity=0.139  Sum_probs=84.5

Q ss_pred             ccchhhHHHHHHHHHHHHHHHHHHHHhhccCCCCceeeehhhhhhHHHHHHHHHHhhcccccccccCCCcchhHHHHHHH
Q psy1072         161 GSFSTLGTIYGVISSFAQALFSIHTKEVLPYVNDKIWLVSYYNNVYAVALFIPIIFICGEVSELANYPHLFSFYFWILLT  240 (324)
Q Consensus       161 ~~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~  240 (324)
                      .+.+..|.++++.|+++.+...++.||-.++......+                   .+|.+  ..  ...++. |+.-.
T Consensus        16 ~~d~~~G~~LaissS~~Ig~sfilkKkgl~r~~~~~~r-------------------a~~gg--~~--yl~~~~-Ww~G~   71 (335)
T KOG2922|consen   16 SSDNIIGLVLAISSSIFIGSSFILKKKGLKRAGASGLR-------------------AGEGG--YG--YLKEPL-WWAGM   71 (335)
T ss_pred             ccCceeeeeehhhccEEEeeehhhhHHHHHHHhhhccc-------------------ccCCC--cc--hhhhHH-HHHHH
Confidence            34567899999999999999998888876543221000                   01111  01  112232 33333


Q ss_pred             HHHHHHHHHHHHHHHHHhccCchhhhhhccchHHHHHHHHHHHhCCCcchhhHhHHHHHhhhhhheehhccccc
Q psy1072         241 IGGVFGLTIGYVTSLQIQVTSPLTHNISGTAKASFHTVLATYWYSEFKPLLWWISNGIILSGSATYALVKKKEL  314 (324)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~a~~~si~~~~~~v~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~~~~~~~~  314 (324)
                      +.-..|=..+|..|   ...+++-..-++.+.-+.+.+++..+++|++++...+|++++++|........+++.
T Consensus        72 ltm~vGei~NFaAY---aFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~e~  142 (335)
T KOG2922|consen   72 LTMIVGEIANFAAY---AFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAPKEQ  142 (335)
T ss_pred             HHHHHHhHhhHHHH---hhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecCccc
Confidence            33344445555544   456666667778889999999999999999999999999999999887665544443

>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function

Probab=91.97  E-value=0.18  Score=43.32  Aligned_cols=132  Identities=13%  Similarity=0.126  Sum_probs=71.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhccCCCCceeeehhhhhhHHHHHHHHHHhhcccccccccCCCcchhHHHHHHHHHHHHH
Q psy1072         167 GTIYGVISSFAQALFSIHTKEVLPYVNDKIWLVSYYNNVYAVALFIPIIFICGEVSELANYPHLFSFYFWILLTIGGVFG  246 (324)
Q Consensus       167 G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (324)
                      |++.++.|+++++..-+=.||.-   ..+++-.+.++.....+.-....+.. +.+.           ++.+..+.|.+-
T Consensus         1 G~~a~~va~~~fGs~~vPvK~~~---~gDg~~fQw~~~~~i~~~g~~v~~~~-~~p~-----------f~p~amlgG~lW   65 (254)
T PF07857_consen    1 GYIACIVAVLFFGSNFVPVKKFD---TGDGFFFQWVMCSGIFLVGLVVNLIL-GFPP-----------FYPWAMLGGALW   65 (254)
T ss_pred             CchhHHHHHHHhcccceeeEecc---CCCcHHHHHHHHHHHHHHHHHHHHhc-CCCc-----------ceeHHHhhhhhh
Confidence            56778888898888887777652   12444555555433333333333332 2211           122233344443


Q ss_pred             HHHHHHHHHHHhccCchh-hhhhccchHHHHHHHHHH-HhCCC-----cchhhHhHHHHHhhhhhheehhcccc
Q psy1072         247 LTIGYVTSLQIQVTSPLT-HNISGTAKASFHTVLATY-WYSEF-----KPLLWWISNGIILSGSATYALVKKKE  313 (324)
Q Consensus       247 ~~~~~~~~~~~~~~~a~~-~si~~~~~~v~~~~~~~~-~~~e~-----~~~~~~~G~~li~~g~~~~~~~~~~~  313 (324)
                      ...|....-.+|..+-.. ..+-+..+-+.+...|-+ +||++     -++..++|.+++++|..+|...|.++
T Consensus        66 ~~gN~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fik~~~  139 (254)
T PF07857_consen   66 ATGNILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFIKSEE  139 (254)
T ss_pred             hcCceeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheeeecCCC
Confidence            334444444455554222 222234445555555543 55533     35778899999999999998866654

The region concerned is approximately 280 residues long.

>KOG4314|consensus

Probab=91.79  E-value=0.26  Score=40.04  Aligned_cols=66  Identities=14%  Similarity=0.084  Sum_probs=58.3

Q ss_pred             HHHHHHHHHHhccCchhhhhhccchHHHHHHHHHHHhCCCcchhhHhHHHHHhhhhhheehhcccc
Q psy1072         248 TIGYVTSLQIQVTSPLTHNISGTAKASFHTVLATYWYSEFKPLLWWISNGIILSGSATYALVKKKE  313 (324)
Q Consensus       248 ~~~~~~~~~~~~~~a~~~si~~~~~~v~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~~~~~~~  313 (324)
                      ..+|....++++.+|+.++-....+..+..+++++.+||++....++..++.+.|+...++.....
T Consensus        65 ~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN~~  130 (290)
T KOG4314|consen   65 GANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADNEH  130 (290)
T ss_pred             cCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccchh
Confidence            356666677999999999999999999999999999999999999999999999999888665443

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=91.56  E-value=5.5  Score=31.19  Aligned_cols=128  Identities=13%  Similarity=0.094  Sum_probs=77.1

Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhhCCCCCcCCCCCCCChhhhhHHHHHHHHHHHHH
Q psy1072          18 YWCVSITTIFLNKTLLSELQLDAPIFVTWYQCLVSAIICFVLCQLSQQYPKNFSFPYGNPFDTNNMRNLVPLTSCFILML   97 (324)
Q Consensus        18 ~~~~~~~~~~~~K~~l~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   97 (324)
                      -++......-.|-.+-+..  ..|+.-.+.-+..+..++..+...++..+.    +   ...++..++.+..|++.....
T Consensus        13 aG~~l~~Q~~iN~qL~~~~--~spl~As~isf~vGt~~L~~l~l~~~~~~~----~---a~~~~~pwW~~~GG~lGa~~v   83 (150)
T COG3238          13 AGALLPLQAAINGRLARYL--GSPLLASLISFLVGTVLLLILLLIKQGHPG----L---AAVASAPWWAWIGGLLGAIFV   83 (150)
T ss_pred             HhhhhhhHHHHHHHHHHHc--CChHHHHHHHHHHHHHHHHHHHHHhcCCCc----h---hhccCCchHHHHccchhhhhh
Confidence            3333344444666665553  378999999999988888888777442221    1   112232333344445555555


Q ss_pred             HHhhhhccccchhHHH-HHHHHHHHHHHHHHHHHh----ccccchhhHHHHHHHhhhceeee
Q psy1072          98 SFNNLCLKNVGVAFYY-VSRSLTTVFNVILTYILL----QEKTSHLAILSCFIIFSGFALGV  154 (324)
Q Consensus        98 ~~~~~al~~~~~~~~~-~l~~~~p~~~~~~~~~~~----~e~~~~~~~~~~~l~~~Gv~l~~  154 (324)
                      ..+........+.... +...-+-+.-++++.+=.    +++++..++.++++.++|+.+..
T Consensus        84 t~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~  145 (150)
T COG3238          84 TSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLAR  145 (150)
T ss_pred             hhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhc
Confidence            5555555665555544 444555666666665433    36789999999999999955443

>KOG1580|consensus

Probab=90.94  E-value=0.26  Score=41.25  Aligned_cols=72  Identities=15%  Similarity=0.194  Sum_probs=64.3

Q ss_pred             hhhhHHHHHHHHHHHHHHHhhhhccccchhHHHHHHHHHHHHHHHHHHHHhccccchhhHHHHHHHhhhcee
Q psy1072          81 NNMRNLVPLTSCFILMLSFNNLCLKNVGVAFYYVSRSLTTVFNVILTYILLQEKTSHLAILSCFIIFSGFAL  152 (324)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~p~~~~~~~~~~~~e~~~~~~~~~~~l~~~Gv~l  152 (324)
                      ..+.++...+++.+++.++-+.-..+-++-.-+++..+--+|+.+.+.++++.+++.++|++..+.+.|...
T Consensus       239 ~~~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~  310 (337)
T KOG1580|consen  239 YVFWDLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTA  310 (337)
T ss_pred             HHHHHHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhh
Confidence            456777888888889999988888888888888888888999999999999999999999999999999876

>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family

Probab=90.74  E-value=1.3  Score=39.41  Aligned_cols=141  Identities=18%  Similarity=0.191  Sum_probs=71.9

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHhhccCCCCceeeehhhhhhHHHHHHHHHHhhcccccccccCCCcchhHHHHHHHHHHH
Q psy1072         165 TLGTIYGVISSFAQALFSIHTKEVLPYVNDKIWLVSYYNNVYAVALFIPIIFICGEVSELANYPHLFSFYFWILLTIGGV  244 (324)
Q Consensus       165 ~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  244 (324)
                      ..|+++..+++++.+.+.+=.||.    +.=.||......-.-+-+..|.....-+.++..+.-...+...+....+.|+
T Consensus         6 i~Gii~h~iGg~~~~sfy~P~kkv----k~WsWEs~Wlv~gi~swli~P~~~a~l~ip~~~~i~~~~~~~~l~~~~l~G~   81 (344)
T PF06379_consen    6 ILGIIFHAIGGFASGSFYVPFKKV----KGWSWESYWLVQGIFSWLIVPWLWALLAIPDFFSIYSATPASTLFWTFLFGV   81 (344)
T ss_pred             HHHHHHHHHHHHHhhhhccchhhc----CCccHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHhCChhHHHHHHHHHH
Confidence            579999999999999999888776    3334555544333333344444333213333322111112222333333343


Q ss_pred             HHHHHHHHHH-HHHhccCc-hhhhhhccchHHHHHHHHHHHhC-------CCcchhhHhHHHHHhhhhhheehhc
Q psy1072         245 FGLTIGYVTS-LQIQVTSP-LTHNISGTAKASFHTVLATYWYS-------EFKPLLWWISNGIILSGSATYALVK  310 (324)
Q Consensus       245 ~~~~~~~~~~-~~~~~~~a-~~~si~~~~~~v~~~~~~~~~~~-------e~~~~~~~~G~~li~~g~~~~~~~~  310 (324)
                      + +.+.-..| ..+|+.+- ...++.--+-.++..++--++.|       ++-....++|.+++++|+....+..
T Consensus        82 l-WGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~AG  155 (344)
T PF06379_consen   82 L-WGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKAG  155 (344)
T ss_pred             H-HhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHHH
Confidence            3 22222222 23555542 23333333333344444333333       2223456899999999999887653

This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane

>KOG1444|consensus

Probab=90.60  E-value=1.6  Score=38.31  Aligned_cols=139  Identities=10%  Similarity=0.061  Sum_probs=86.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhhhCCC-CCcCCCCCCCChhhhhHHHHHHH
Q psy1072          13 FVVALYWCVSITTIFLNKTLLSELQLDAPIFVTWYQCLVSAIICFVLCQLSQQYPK-NFSFPYGNPFDTNNMRNLVPLTS   91 (324)
Q Consensus        13 ~~~~~~~~~~~~~~~~~K~~l~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~   91 (324)
                      ..+...+.+.....+..|.-.+..++ .-.-+.++..+.....+........-.+. ....++  ..+...+-.+...++
T Consensus       160 ~w~~~n~~~~a~~~v~~kk~vd~~~l-~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~--~~~~~~~~~~~lScv  236 (314)
T KOG1444|consen  160 SWALANCLTTAAFVVYVKKSVDSANL-NKFGLVFYNNLLSLPPLLILSFITGELDALSLNFDN--WSDSSVLVVMLLSCV  236 (314)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhccccc-cceeEEeehhHHHHHHHHHHHHHhcchHHHHhhccc--ccchhHHHHHHHHHH
Confidence            34444455555555566666665444 23345555556555555555433221100 001110  112233445566667


Q ss_pred             HHHHHHHHhhhhccccchhHHHHHHHHHHHHHHHHHHHHhccccchhhHHHHHHHhhhceeee
Q psy1072          92 CFILMLSFNNLCLKNVGVAFYYVSRSLTTVFNVILTYILLQEKTSHLAILSCFIIFSGFALGV  154 (324)
Q Consensus        92 ~~~~~~~~~~~al~~~~~~~~~~l~~~~p~~~~~~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~  154 (324)
                      +.++-.++...+.+..|+-+.++.....-..+.+...++.+++.++....|+.+++.|-++-.
T Consensus       237 ~gf~isy~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~  299 (314)
T KOG1444|consen  237 MGFGISYTSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYS  299 (314)
T ss_pred             HHHHHHHHHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHh
Confidence            778888899999999999999998866677777777777778888999999888888887644

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=89.58  E-value=1  Score=33.49  Aligned_cols=50  Identities=14%  Similarity=0.088  Sum_probs=38.6

Q ss_pred             HHhccCchhhhhh-ccchHHHHHHHHHHHhCCCcchhhHhHHHHHhhhhhh
Q psy1072         256 QIQVTSPLTHNIS-GTAKASFHTVLATYWYSEFKPLLWWISNGIILSGSAT  305 (324)
Q Consensus       256 ~~~~~~a~~~si~-~~~~~v~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~  305 (324)
                      .+++.+-+.+.-+ +.+.=+++.+.|+++.+|..+...++|+++++.|+.+
T Consensus        61 ~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~L  111 (113)
T PF10639_consen   61 LLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVAL  111 (113)
T ss_pred             HHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeee
Confidence            4666665544444 5777888889998887778889999999999999865

Many members are annotated as potential transmembrane proteins.

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	324
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.36
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.34
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.15
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.09

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.36  E-value=4.1e-07  Score=69.30  Aligned_cols=69  Identities=10%  Similarity=0.041  Sum_probs=46.2

Q ss_pred             HHHHHHHHHHHHH-HHHhccCchhhhhh-ccchHHHHHHHHHHHhCCCcchhhHhHHHHHhhhhhheehhc
Q psy1072         242 GGVFGLTIGYVTS-LQIQVTSPLTHNIS-GTAKASFHTVLATYWYSEFKPLLWWISNGIILSGSATYALVK  310 (324)
Q Consensus       242 ~~~~~~~~~~~~~-~~~~~~~a~~~si~-~~~~~v~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~~~~  310 (324)
                      .+++++...+..+ .++|+.++..+..+ ..+.|+.+.++|++++||++|+.+++|+++++.|+.+.+..+
T Consensus        35 l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~~  105 (137)
T 2i68_A           35 GTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (137)
T ss_dssp             HHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            3344444444444 56999999988887 899999999999999999999999999999999999987644

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.34  E-value=1.4e-06  Score=63.98  Aligned_cols=70  Identities=14%  Similarity=0.202  Sum_probs=62.1

Q ss_pred             HHHHHHHHHHHHHhhhhccccchhHHHHH-HHHHHHHHHHHHHHHhccccchhhHHHHHHHhhhceeeeec
Q psy1072          87 VPLTSCFILMLSFNNLCLKNVGVAFYYVS-RSLTTVFNVILTYILLQEKTSHLAILSCFIIFSGFALGVNQ  156 (324)
Q Consensus        87 ~~~~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~p~~~~~~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~  156 (324)
                      +...+++.....+...++++.|.+.+..+ .+..|+++.+.+++++||+++..++.++.+.++|+++....
T Consensus        34 ~~~~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~  104 (110)
T 3b5d_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLL  104 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence            34445667888889999999999999888 89999999999999999999999999999999999876543

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.15  E-value=2.4e-06  Score=65.04  Aligned_cols=69  Identities=14%  Similarity=0.212  Sum_probs=51.1

Q ss_pred             HHHHHHHHHHHHHhhhhccccchhHHHHH-HHHHHHHHHHHHHHHhccccchhhHHHHHHHhhhceeeee
Q psy1072          87 VPLTSCFILMLSFNNLCLKNVGVAFYYVS-RSLTTVFNVILTYILLQEKTSHLAILSCFIIFSGFALGVN  155 (324)
Q Consensus        87 ~~~~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~p~~~~~~~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~  155 (324)
                      +...+++.+..++.+.++++.|++.+..+ .++.|++++++++++++|+++..+++++.++++|+++...
T Consensus        34 ~l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~  103 (137)
T 2i68_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINL  103 (137)
T ss_dssp             CHHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence            34445677888999999999999998888 8999999999999999999999999999999999998643

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.09  E-value=9.8e-06  Score=59.41  Aligned_cols=67  Identities=9%  Similarity=0.009  Sum_probs=55.4

Q ss_pred             HHHHHHHHHHHH-HHHhccCchhhhhh-ccchHHHHHHHHHHHhCCCcchhhHhHHHHHhhhhhheehh
Q psy1072         243 GVFGLTIGYVTS-LQIQVTSPLTHNIS-GTAKASFHTVLATYWYSEFKPLLWWISNGIILSGSATYALV  309 (324)
Q Consensus       243 ~~~~~~~~~~~~-~~~~~~~a~~~si~-~~~~~v~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~~~  309 (324)
                      ++.++...+..+ ..+|+.+...+... ..+.|+.+.++|++++||++|+.+++|+.+++.|+...+..
T Consensus        36 ~~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~  104 (110)
T 3b5d_A           36 TIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLL  104 (110)
T ss_pred             HHHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence            334444444433 56899999988777 89999999999999999999999999999999999987754

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00