Psyllid ID: psy10937


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-
MNKIQVGAAPSPNLKKVTSKIGSLQNAHYKPGGGKVKIENRKLEWKAEPRIAAKNDEYVPGGGDKKIEVVKLNWNAKPKVGSLDNATHKPGGGDKKIESVKLDFKDKAKPKVGSKDNLKHSPGGGTVKVLP
cccEEEEEccccccccccccccccccccccccccEEEEEEEEccccccccccccccEEEccccEEEEEEEEcccccccccccccccccccccccEEEEEEEEccccccccccccccccccccccccEEEcc
cccEEEccccccccHHccccccccccccccccccEEEEEEEEEEEEEcccccccccccccccccEEEEEEEEEEEEEEEccccHHcccccccccEEEEEEEEccHHHcHccccccHcccEccccccEEEcc
mnkiqvgaapspnlkKVTSKIGslqnahykpgggkvkienrklewkaepriaakndeyvpgggdkkIEVVKLNwnakpkvgsldnathkpgggdkkiesvkldfkdkakpkvgskdnlkhspgggtvkvlp
mnkiqvgaapspnlKKVTSKIgslqnahykpgggkvkienrklewkaepriaakndeyvpgggDKKIEVVKLNwnakpkvgsldnathkpgggdkkiesvkldfkdkakpkvgskdnlkhspgggtvkvlp
MNKIQVGAAPSPNLKKVTSKIGSLQNAHYKPGGGKVKIENRKLEWKAEPRIAAKNDEYVPGGGDKKIEVVKLNWNAKPKVGSLDNATHKPGGGDKKIESVKLDFKDKAKPKVGSKDNLKHSPGGGTVKVLP
********************************************W************YVPGGGDKKIEVVKLNWNA*******************************************************
*************************************IE***************************IEVVKLNWN*********************IESVKLDFKDKA***********************
*************LKKVTSKIGSLQNAHYKPGGGKVKIENRKLEWKAEPRIAAKNDEYVPGGGDKKIEVVKLNWNAKPKVGSLDNATHKPGGGDKKIESVKLDFKDKAKPKVGSKDNLKHSPGGGTVKVLP
**KIQVGAAPSPNLKKVTSKIGSLQNAHYKPGGGKVKIENRKLEWKAEPRIAAKNDEYVPGGGDKKIEVVKLNWNAKPKVGSLDNATHKPGGGDKKIESVKLDFKDKAKPKVGSKDNLKHSPGGGTVKVL*
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MNKIQVGAAPSPNLKKVTSKIGSLQNAHYKPGGGKVKIENRKLEWKAEPRIAAKNDEYVPGGGDKKIEVVKLNWNAKPKVGSLDNATHKPGGGDKKIESVKLDFKDKAKPKVGSKDNLKHSPGGGTVKVLP
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query131 2.2.26 [Sep-21-2011]
P151461861 Microtubule-associated pr yes N/A 0.916 0.064 0.512 9e-24
Q9MYX8383 Microtubule-associated pr N/A N/A 0.977 0.334 0.450 1e-22
Q6TS35430 Microtubule-associated pr N/A N/A 0.977 0.297 0.450 2e-22
P57786459 Microtubule-associated pr no N/A 0.977 0.278 0.450 2e-22
P10637733 Microtubule-associated pr no N/A 0.977 0.174 0.450 2e-22
O02828403 Microtubule-associated pr N/A N/A 0.977 0.317 0.450 3e-22
P29172448 Microtubule-associated pr yes N/A 0.977 0.285 0.450 3e-22
P10636758 Microtubule-associated pr no N/A 0.977 0.168 0.442 3e-22
Q5YCW1776 Microtubule-associated pr no N/A 0.977 0.164 0.442 4e-22
Q5YCW0776 Microtubule-associated pr N/A N/A 0.977 0.164 0.442 4e-22
>sp|P15146|MAP2_RAT Microtubule-associated protein 2 OS=Rattus norvegicus GN=Map2 PE=1 SV=3 Back     alignment and function desciption
 Score =  108 bits (270), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 63/123 (51%), Positives = 84/123 (68%), Gaps = 3/123 (2%)

Query: 10   PSPNLKKVTSKIGSLQNAHYKPGGGKVKIENRKLEW-KAEPRIAAK-NDEYVPGGGDKKI 67
            P P+LK V SKIGS  N  Y+P GG+V+I N+K+++ K + R  +K N ++  GGG+ +I
Sbjct: 1669 PLPDLKNVKSKIGSTDNIKYQPKGGQVRILNKKMDFSKVQSRCGSKDNIKHSAGGGNVQI 1728

Query: 68   EVVKLNWN-AKPKVGSLDNATHKPGGGDKKIESVKLDFKDKAKPKVGSKDNLKHSPGGGT 126
               K++ +    K GSL N  H+PGGG  KIESVKLDFK+KA+ KVGS DN  H PGGG 
Sbjct: 1729 VTKKIDLSHVTSKCGSLKNIRHRPGGGRVKIESVKLDFKEKAQAKVGSLDNAHHVPGGGN 1788

Query: 127  VKV 129
            VK+
Sbjct: 1789 VKI 1791




The exact function of MAP2 is unknown but MAPs may stabilize the microtubules against depolymerization. They also seem to have a stiffening effect on microtubules.
Rattus norvegicus (taxid: 10116)
>sp|Q9MYX8|TAU_PAPHA Microtubule-associated protein tau OS=Papio hamadryas GN=MAPT PE=2 SV=3 Back     alignment and function description
>sp|Q6TS35|TAU_SPECI Microtubule-associated protein tau OS=Spermophilus citellus GN=MAPT PE=1 SV=3 Back     alignment and function description
>sp|P57786|TAU_MACMU Microtubule-associated protein tau OS=Macaca mulatta GN=MAPT PE=2 SV=2 Back     alignment and function description
>sp|P10637|TAU_MOUSE Microtubule-associated protein tau OS=Mus musculus GN=Mapt PE=1 SV=3 Back     alignment and function description
>sp|O02828|TAU_CAPHI Microtubule-associated protein tau OS=Capra hircus GN=MAPT PE=2 SV=3 Back     alignment and function description
>sp|P29172|TAU_BOVIN Microtubule-associated protein tau OS=Bos taurus GN=MAPT PE=1 SV=3 Back     alignment and function description
>sp|P10636|TAU_HUMAN Microtubule-associated protein tau OS=Homo sapiens GN=MAPT PE=1 SV=5 Back     alignment and function description
>sp|Q5YCW1|TAU_PANTR Microtubule-associated protein tau OS=Pan troglodytes GN=MAPT PE=3 SV=4 Back     alignment and function description
>sp|Q5YCW0|TAU_GORGO Microtubule-associated protein tau OS=Gorilla gorilla gorilla GN=MAPT PE=3 SV=4 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query131
328698978 816 PREDICTED: hypothetical protein LOC10016 0.984 0.158 0.813 6e-55
340725275 885 PREDICTED: hypothetical protein LOC10064 0.984 0.145 0.807 5e-54
350404127 883 PREDICTED: hypothetical protein LOC10074 0.984 0.146 0.807 1e-53
322786613 894 hypothetical protein SINV_12136 [Solenop 0.984 0.144 0.807 3e-53
307208336 1076 Microtubule-associated protein 2 [Harpeg 0.977 0.118 0.813 3e-53
332025590 945 Microtubule-associated protein 2 [Acromy 0.977 0.135 0.813 2e-52
66549944 270 PREDICTED: microtubule-associated protei 0.977 0.474 0.798 4e-52
383851727 304 PREDICTED: microtubule-associated protei 0.977 0.421 0.821 4e-52
380024772 328 PREDICTED: microtubule-associated protei 0.977 0.390 0.798 1e-51
307175832 1372 Microtubule-associated protein 2 [Campon 0.977 0.093 0.798 5e-51
>gi|328698978|ref|XP_001949022.2| PREDICTED: hypothetical protein LOC100160462 [Acyrthosiphon pisum] Back     alignment and taxonomy information
 Score =  218 bits (555), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 105/129 (81%), Positives = 117/129 (90%)

Query: 1   MNKIQVGAAPSPNLKKVTSKIGSLQNAHYKPGGGKVKIENRKLEWKAEPRIAAKNDEYVP 60
           MNK+QVG+APSPNLK V SK+GSLQN  +KPGGG+VKIENRKLEWKA  R+ AKND YVP
Sbjct: 620 MNKVQVGSAPSPNLKVVRSKVGSLQNTSHKPGGGQVKIENRKLEWKAGTRVEAKNDAYVP 679

Query: 61  GGGDKKIEVVKLNWNAKPKVGSLDNATHKPGGGDKKIESVKLDFKDKAKPKVGSKDNLKH 120
           GGGDKKI+ VKL WNAKPKVGSLDN THKPGGGDKKIE+VKLDFKDKAKPK+GSKDN+KH
Sbjct: 680 GGGDKKIQSVKLQWNAKPKVGSLDNKTHKPGGGDKKIETVKLDFKDKAKPKIGSKDNIKH 739

Query: 121 SPGGGTVKV 129
           +PGGG VK+
Sbjct: 740 TPGGGAVKI 748




Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340725275|ref|XP_003400998.1| PREDICTED: hypothetical protein LOC100643713 [Bombus terrestris] Back     alignment and taxonomy information
>gi|350404127|ref|XP_003487011.1| PREDICTED: hypothetical protein LOC100743933 [Bombus impatiens] Back     alignment and taxonomy information
>gi|322786613|gb|EFZ13008.1| hypothetical protein SINV_12136 [Solenopsis invicta] Back     alignment and taxonomy information
>gi|307208336|gb|EFN85743.1| Microtubule-associated protein 2 [Harpegnathos saltator] Back     alignment and taxonomy information
>gi|332025590|gb|EGI65753.1| Microtubule-associated protein 2 [Acromyrmex echinatior] Back     alignment and taxonomy information
>gi|66549944|ref|XP_393045.2| PREDICTED: microtubule-associated protein 2-like, partial [Apis mellifera] Back     alignment and taxonomy information
>gi|383851727|ref|XP_003701383.1| PREDICTED: microtubule-associated protein tau-like [Megachile rotundata] Back     alignment and taxonomy information
>gi|380024772|ref|XP_003696165.1| PREDICTED: microtubule-associated protein tau-like [Apis florea] Back     alignment and taxonomy information
>gi|307175832|gb|EFN65647.1| Microtubule-associated protein 2 [Camponotus floridanus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query131
FB|FBgn0051057361 tau "tau" [Drosophila melanoga 0.984 0.357 0.720 1.1e-48
UNIPROTKB|F1NUN1703 F1NUN1 "Microtubule-associated 0.969 0.180 0.477 6.9e-27
UNIPROTKB|G3N2J1403 MAPT "Microtubule-associated p 0.969 0.315 0.462 4e-26
UNIPROTKB|E9PTR5403 Mapt "Microtubule-associated p 0.969 0.315 0.462 4e-26
UNIPROTKB|E9PTL3498 Map2 "Microtubule-associated p 0.916 0.240 0.512 5.5e-26
UNIPROTKB|P29172448 MAPT "Microtubule-associated p 0.969 0.283 0.462 5.8e-26
UNIPROTKB|D4A1Q2686 Mapt "Microtubule-associated p 0.969 0.185 0.462 3.5e-25
MGI|MGI:97180733 Mapt "microtubule-associated p 0.969 0.173 0.462 4e-25
UNIPROTKB|F1LST4752 Mapt "Microtubule-associated p 0.969 0.168 0.462 4.3e-25
UNIPROTKB|C9JSN6758 MAPT "Microtubule-associated p 0.969 0.167 0.462 4.3e-25
FB|FBgn0051057 tau "tau" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 508 (183.9 bits), Expect = 1.1e-48, P = 1.1e-48
 Identities = 93/129 (72%), Positives = 109/129 (84%)

Query:     1 MNKIQVGAAPSPNLKKVTSKIGSLQNAHYKPGGGKVKIENRKLEWKAEPRIAAKNDEYVP 60
             MNK+QVG APSPNLK V SKIGSL NA YKPGGG VKIE++K++ KA PRI AKND+Y+P
Sbjct:   162 MNKVQVGHAPSPNLKAVRSKIGSLDNATYKPGGGHVKIESKKIDIKAAPRIEAKNDKYMP 221

Query:    61 GGGDKKIEVVKLNWNAKPKVGSLDNATHKPGGGDKKIESVKLDFKDKAKPKVGSKDNLKH 120
              GG+KKI   KL WNAK K+GSL+NA HKPGGGDKKIE++K+DFKDKAKPKVGS  N+KH
Sbjct:   222 KGGEKKIVTTKLQWNAKSKIGSLENAAHKPGGGDKKIETLKMDFKDKAKPKVGSTANVKH 281

Query:   121 SPGGGTVKV 129
              PGGG +K+
Sbjct:   282 QPGGGDIKI 290


GO:0005875 "microtubule associated complex" evidence=ISS;NAS
GO:0008017 "microtubule binding" evidence=ISS
GO:0007017 "microtubule-based process" evidence=ISS
GO:0008355 "olfactory learning" evidence=IMP
GO:0072375 "medium-term memory" evidence=IMP
UNIPROTKB|F1NUN1 F1NUN1 "Microtubule-associated protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|G3N2J1 MAPT "Microtubule-associated protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|E9PTR5 Mapt "Microtubule-associated protein" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|E9PTL3 Map2 "Microtubule-associated protein" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|P29172 MAPT "Microtubule-associated protein tau" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|D4A1Q2 Mapt "Microtubule-associated protein" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
MGI|MGI:97180 Mapt "microtubule-associated protein tau" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|F1LST4 Mapt "Microtubule-associated protein" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|C9JSN6 MAPT "Microtubule-associated protein tau" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P15146MAP2_RATNo assigned EC number0.51210.91600.0644yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query131
pfam0041831 pfam00418, Tubulin-binding, Tau and MAP protein, t 2e-04
pfam0041831 pfam00418, Tubulin-binding, Tau and MAP protein, t 0.003
>gnl|CDD|144129 pfam00418, Tubulin-binding, Tau and MAP protein, tubulin-binding repeat Back     alignment and domain information
 Score = 35.8 bits (83), Expect = 2e-04
 Identities = 16/30 (53%), Positives = 20/30 (66%), Gaps = 1/30 (3%)

Query: 96  KIESVKLDFKDKAKPKVGSKDNLKHSPGGG 125
           +I + KLD K   + K GS DN+KH PGGG
Sbjct: 2   QIVNKKLDLK-NVQSKCGSTDNIKHQPGGG 30


This family includes the vertebrate proteins MAP2, MAP4 and Tau, as well as other animal homologs. MAP4 is present in many tissues but is usually absent from neurons; MAP2 and Tau are mainly neuronal. Members of this family have the ability to bind to and stabilise microtubules. As a result, they are involved in neuronal migration, supporting dendrite elongation, and regulating microtubules during mitotic metaphase. Note that Tau is involved in neurofibrillary tangle formation in Alzheimer's disease and some other dementias. This family features a C-terminal microtubule binding repeat that contains a conserved KXGS motif. Length = 31

>gnl|CDD|144129 pfam00418, Tubulin-binding, Tau and MAP protein, tubulin-binding repeat Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 131
KOG2418|consensus448 100.0
KOG2418|consensus448 100.0
PF0041831 Tubulin-binding: Tau and MAP protein, tubulin-bind 99.6
PF0041831 Tubulin-binding: Tau and MAP protein, tubulin-bind 99.57
>KOG2418|consensus Back     alignment and domain information
Probab=100.00  E-value=1.3e-48  Score=337.50  Aligned_cols=127  Identities=43%  Similarity=0.700  Sum_probs=119.3

Q ss_pred             CcccccccCCCCccccccccccCcCCcccCCCCc-eeeeeeccccc-ccccccc-CCccccCCCCceeEEEEEeecc--c
Q psy10937          2 NKIQVGAAPSPNLKKVTSKIGSLQNAHYKPGGGK-VKIENRKLEWK-AEPRIAA-KNDEYVPGGGDKKIEVVKLNWN--A   76 (131)
Q Consensus         2 ~~~~~~~~p~Pdl~~V~SKiGS~dNikh~PGGG~-vkI~~~K~d~~-~~sk~gs-~N~~h~PgGG~vkI~s~Kld~~--~   76 (131)
                      +.+|.+++|+|||+||+|||||++|||||||||+ |||.++|+||+ ++||||| +||+|+||||+|+|+++||||+  +
T Consensus       278 k~lr~~p~p~pdlkNVKSKIGSt~NiKhqpgGG~IVqIv~kk~dlshvtSKcGSLkNi~H~pGGG~V~Ies~KLDFk~~~  357 (448)
T KOG2418|consen  278 KVLRMTPKPNPDLKNVKSKIGSTTNIKHQPGGGNIVQIVSKKRDLSHVTSKCGSLKNITHVPGGGNVQIESRKLDFKAAV  357 (448)
T ss_pred             chhcccCCCCchhhhhhhhccccccccccCCCCcEEEEEeechhhhhhhhhhcccccccccCCCceeeeeeeecchhhhh
Confidence            4789999999999999999999999999999999 99999999995 8999997 7999999999999999999997  5


Q ss_pred             ccccccCCCCcccCCCCCeeEEEeeeccccCcccCCCCCCCCcccCCCCceeec
Q psy10937         77 KPKVGSLDNATHKPGGGDKKIESVKLDFKDKAKPKVGSKDNLKHSPGGGTVKVL  130 (131)
Q Consensus        77 ~SK~GS~dNi~H~PgGG~vkIes~Kldf~~ka~sKvGS~dni~H~PgGG~vki~  130 (131)
                      |+|||||||++|+||||||||+++||+|+++  +|+++.+++.|+|-+++|.+.
T Consensus       358 qaKVGSldNahhvPgggnvKI~S~KLtfre~--aKa~~dhgAei~~~sp~vs~~  409 (448)
T KOG2418|consen  358 QAKVGSLDNAHHVPGGGNVKIVSEKLTFREK--AKAGSDHGAEIKPASPNVSSV  409 (448)
T ss_pred             hhhcccccccccccCCCceeeeeeecchhhh--ccccccCCceeeccCCccccc
Confidence            9999999999999999999999999999954  677888899999999988764



>KOG2418|consensus Back     alignment and domain information
>PF00418 Tubulin-binding: Tau and MAP protein, tubulin-binding repeat; InterPro: IPR001084 Microtubules consist of tubulins as well as a group of additional proteins collectively known as the Microtubule Associated Proteins (MAP) Back     alignment and domain information
>PF00418 Tubulin-binding: Tau and MAP protein, tubulin-binding repeat; InterPro: IPR001084 Microtubules consist of tubulins as well as a group of additional proteins collectively known as the Microtubule Associated Proteins (MAP) Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00