Psyllid ID: psy10947

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------14
Protein Sequence
MDPSVLAAMDKDALKKQIENMKYQATMERWPLSKSIQAYLVPTFISHIGTLNSTYGIFKCIHRSNGAMDPSVLAAMDKDALKKQIENMKYQATMERWPLSKSIQAMREYVEENEKNDPLIHAPDKKNNPWAEKGKCSIM
Secondary Structure (PSIPRED)
ccHHHHHHHcHHHHHHHHHccHHHHHcccccccccccHHHHcEEEEcccccccccccccccccccccccHHHHHHccHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHcccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHcHHHHHHHHHHHHHHHHHccccccHHHHHHHcHHHHHHHHHHcccccHEEEEEcccccccHHHHHHHcHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHccccccccccccccccccHHcccEEEc
Coil and Loop (DISEMBL)
MDPSVLAAMDKDALKKQIENMKYQATmerwplsksiQAYLVPTFIshigtlnstyGIFKcihrsngamdpsvLAAMDKDALKKQIENMKYQATMERWPLSKSIQAMREYVEenekndplihapdkknnpwaekgkcsim
Flexible Loop (DISEMBL)
MDPSVLAAMDKDALKKQIENMKYQATMERWPLSKSIQAYLVPTFISHIGTLNSTYGIFKCIHRSNGAMDPSVLAAMDKDALKKQIENMKyqatmerwpLSKSIQAMREYVEENekndplihapdkknnpwaekgkcsim
Low Complexity Region (SEG)
MDPSVLAAMDKDALKKQIENMKYQATMERWPLSKSIQAYLVPTFISHIGTLNSTYGIFKCIHRSNGAMDPSVLAAMDKDALKKQIENMKYQATMERWPLSKSIQAMREYVEENEKNDPLIHAPDKKNNPWAEKGKCSIM
Disordered region (IsUnstruct)
*********************KYQATMERWPLSKSIQAYLVPTFISHIGTLNSTYGIFKCIH*****************************************************************************
Disordered Region (DISOPRED)
****V***MDKDALKKQIENMKYQATMERWPLSKSIQAYLVPTFISHIGTLNSTYGI**************************QIENMKYQATMERWPLSKSIQAMREYVEENEKNDPLIHAPDK***PWAEKGKCSIM
Disordered Region (DISEMBL)
********MDKDALKKQIENMKYQATMERWPLSKSIQAYLVPTFISHIGTLNSTYGIFKCIHRSNGAMDPSVLAAMDKDALKKQIENMKYQATMERWPLSKSIQAMREYVEENEKNDPLIHAPDKKNNP**********
Disordered Region (DISPRO)
*DPSVLAAMDKDALKKQIENMKYQATMERWPLSKSIQAYLVPTFISHIGTLNSTYGIFKCIHRSNGAMDPSVLAAMDKDALKKQIENMKYQATMERWPLSKSIQAMREYVEENEKNDPLIHAPDKKNNPWAEKGKCSIM
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MDPSVLAAMDKDALKKQIENMKYQATMERWPLSKSIQAYLVPTFISHIGTLNSTYGIFKCIHRSNGAMDPSVLAAMDKDALKKQIENMKYQATMERWPLSKSIQAMREYVEENEKNDPLIHAPDKKNNPWAEKGKCSIM
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	139	2.2.26 [Sep-21-2011]
Q9NFZ2	72	Guanine nucleotide-bindin	N/A	N/A	0.517	1.0	0.847	6e-30
Q9NFZ3	72	Guanine nucleotide-bindin	yes	N/A	0.517	1.0	0.833	6e-30
Q9P2W3	67	Guanine nucleotide-bindin	yes	N/A	0.453	0.940	0.396	9e-08
P63211	74	Guanine nucleotide-bindin	no	N/A	0.446	0.837	0.396	6e-07
P63210	74	Guanine nucleotide-bindin	no	N/A	0.446	0.837	0.396	6e-07
P02698	74	Guanine nucleotide-bindin	no	N/A	0.446	0.837	0.396	8e-07
Q9JMF3	67	Guanine nucleotide-bindin	yes	N/A	0.453	0.940	0.380	1e-06
Q61012	74	Guanine nucleotide-bindin	no	N/A	0.446	0.837	0.380	1e-06
O14610	69	Guanine nucleotide-bindin	no	N/A	0.446	0.898	0.387	1e-06
Q5E9F0	73	Guanine nucleotide-bindin	no	N/A	0.446	0.849	0.322	1e-05

>sp|Q9NFZ2|GBGE_CALVI Guanine nucleotide-binding protein subunit gamma-e OS=Calliphora vicina PE=3 SV=1

 Score =  129 bits (324), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 61/72 (84%), Positives = 64/72 (88%)

Query: 68  MDPSVLAAMDKDALKKQIENMKYQATMERWPLSKSIQAMREYVEENEKNDPLIHAPDKKN 127
           MDPS L  MD+DALKKQIENMKYQA MERWPLSKSI  MR +VEENEKNDPLI+APDKKN
Sbjct: 1   MDPSALQNMDRDALKKQIENMKYQANMERWPLSKSIAEMRSFVEENEKNDPLINAPDKKN 60

Query: 128 NPWAEKGKCSIM 139
           NPWAEKGKC IM
Sbjct: 61  NPWAEKGKCVIM 72

Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction. This subunit functions in visual transduction in the compound eye.
Calliphora vicina (taxid: 7373)

>sp|Q9NFZ3|GBGE_DROME Guanine nucleotide-binding protein subunit gamma-e OS=Drosophila melanogaster GN=Ggamma30A PE=1 SV=1

 Score =  129 bits (323), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 60/72 (83%), Positives = 65/72 (90%)

Query: 68  MDPSVLAAMDKDALKKQIENMKYQATMERWPLSKSIQAMREYVEENEKNDPLIHAPDKKN 127
           MDPS L  MD+DALKKQIENMKYQA+MERWPLSKSI  MR ++EENEKNDPLI+APDKKN
Sbjct: 1   MDPSALQNMDRDALKKQIENMKYQASMERWPLSKSIAEMRSFIEENEKNDPLINAPDKKN 60

Query: 128 NPWAEKGKCSIM 139
           NPWAEKGKC IM
Sbjct: 61  NPWAEKGKCVIM 72

Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction. This subunit functions in visual transduction in the compound eye.

Drosophila melanogaster (taxid: 7227)

>sp|Q9P2W3|GBG13_HUMAN Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-13 OS=Homo sapiens GN=GNG13 PE=2 SV=1

 Score = 55.5 bits (132), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 25/63 (39%), Positives = 41/63 (65%)

Query: 77  DKDALKKQIENMKYQATMERWPLSKSIQAMREYVEENEKNDPLIHAPDKKNNPWAEKGKC 136
           D   +KK++E++KYQ   +R   SK+I  + +++E+    DP ++    KNNPW EKGKC
Sbjct: 5   DVPQMKKEVESLKYQLAFQREMASKTIPELLKWIEDGIPKDPFLNPDLMKNNPWVEKGKC 64

Query: 137 SIM 139
           +I+
Sbjct: 65  TIL 67

Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.

Homo sapiens (taxid: 9606)

>sp|P63211|GBG1_HUMAN Guanine nucleotide-binding protein G(T) subunit gamma-T1 OS=Homo sapiens GN=GNGT1 PE=2 SV=2

 Score = 52.8 bits (125), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 25/63 (39%), Positives = 39/63 (61%), Gaps = 1/63 (1%)

Query: 77  DKDALKKQIENMKYQATMERWPLSKSIQAMREYVEENEKNDPLIHAPDKKNNPWAE-KGK 135
           +KD LK +++ +K + T+ER  +SK  + +R+YVEE    DPL+    +  NP+ E KG 
Sbjct: 11  EKDKLKMEVDQLKKEVTLERMLVSKCCEEVRDYVEERSGEDPLVKGIPEDKNPFKELKGG 70

Query: 136 CSI 138
           C I
Sbjct: 71  CVI 73

Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.

Homo sapiens (taxid: 9606)

>sp|P63210|GBG1_CANFA Guanine nucleotide-binding protein G(T) subunit gamma-T1 OS=Canis familiaris GN=GNGT1 PE=2 SV=2

 Score = 52.8 bits (125), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 25/63 (39%), Positives = 39/63 (61%), Gaps = 1/63 (1%)

Query: 77  DKDALKKQIENMKYQATMERWPLSKSIQAMREYVEENEKNDPLIHAPDKKNNPWAE-KGK 135
           +KD LK +++ +K + T+ER  +SK  + +R+YVEE    DPL+    +  NP+ E KG 
Sbjct: 11  EKDKLKMEVDQLKKEVTLERMLVSKCCEEVRDYVEERSGEDPLVKGIPEDKNPFKELKGG 70

Query: 136 CSI 138
           C I
Sbjct: 71  CVI 73

Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.

Canis familiaris (taxid: 9615)

>sp|P02698|GBG1_BOVIN Guanine nucleotide-binding protein G(T) subunit gamma-T1 OS=Bos taurus GN=GNGT1 PE=1 SV=2

 Score = 52.4 bits (124), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 25/63 (39%), Positives = 38/63 (60%), Gaps = 1/63 (1%)

Query: 77  DKDALKKQIENMKYQATMERWPLSKSIQAMREYVEENEKNDPLIHAPDKKNNPWAE-KGK 135
           +KD LK +++ +K + T+ER  +SK  +  R+YVEE    DPL+    +  NP+ E KG 
Sbjct: 11  EKDKLKMEVDQLKKEVTLERMLVSKCCEEFRDYVEERSGEDPLVKGIPEDKNPFKELKGG 70

Query: 136 CSI 138
           C I
Sbjct: 71  CVI 73

Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.

Bos taurus (taxid: 9913)

>sp|Q9JMF3|GBG13_MOUSE Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-13 OS=Mus musculus GN=Gng13 PE=3 SV=1

 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 40/63 (63%)

Query: 77  DKDALKKQIENMKYQATMERWPLSKSIQAMREYVEENEKNDPLIHAPDKKNNPWAEKGKC 136
           D   +KK++E++KYQ   +R   SK+I  + +++E+    DP ++    KNNPW EK KC
Sbjct: 5   DVPQMKKEVESLKYQLAFKREMSSKTIPELLKWIEDGIPKDPFLNPDLMKNNPWVEKAKC 64

Query: 137 SIM 139
           +I+
Sbjct: 65  TIL 67

Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.

Mus musculus (taxid: 10090)

>sp|Q61012|GBG1_MOUSE Guanine nucleotide-binding protein G(T) subunit gamma-T1 OS=Mus musculus GN=Gngt1 PE=1 SV=3

 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 39/63 (61%), Gaps = 1/63 (1%)

Query: 77  DKDALKKQIENMKYQATMERWPLSKSIQAMREYVEENEKNDPLIHAPDKKNNPWAE-KGK 135
           +KD LK +++ +K + T+ER  +SK  + +R+Y+EE    DPL+    +  NP+ E KG 
Sbjct: 11  EKDKLKMEVDQLKKEVTLERMMVSKCCEEVRDYIEERSGEDPLVKGIPEDKNPFKELKGG 70

Query: 136 CSI 138
           C I
Sbjct: 71  CVI 73

Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.

Mus musculus (taxid: 10090)

>sp|O14610|GBGT2_HUMAN Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-T2 OS=Homo sapiens GN=GNGT2 PE=2 SV=1

 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 24/62 (38%), Positives = 37/62 (59%)

Query: 77  DKDALKKQIENMKYQATMERWPLSKSIQAMREYVEENEKNDPLIHAPDKKNNPWAEKGKC 136
           +KD LK ++E +K +    R P+SK+ + ++EYVE    NDP +    +  NP+ EKG C
Sbjct: 7   EKDLLKMEVEQLKKEVKNTRIPISKAGKEIKEYVEAQAGNDPFLKGIPEDKNPFKEKGGC 66

Query: 137 SI 138
            I
Sbjct: 67  LI 68

Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.

Homo sapiens (taxid: 9606)

>sp|Q5E9F0|GBG11_BOVIN Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-11 OS=Bos taurus GN=GNG11 PE=3 SV=1

 Score = 48.9 bits (115), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 20/62 (32%), Positives = 38/62 (61%)

Query: 77  DKDALKKQIENMKYQATMERWPLSKSIQAMREYVEENEKNDPLIHAPDKKNNPWAEKGKC 136
           +K+ LK ++E ++ +  ++R  +SK  + ++ Y+EE  + DPL+    +  NP+ EKG C
Sbjct: 11  EKEKLKMEVEQLRKEVKLQRQQVSKCSEEIKNYIEERSREDPLVKGIPEDKNPFKEKGSC 70

Query: 137 SI 138
            I
Sbjct: 71  II 72

Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.

Bos taurus (taxid: 9913)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	139
307214704	72	Guanine nucleotide-binding protein subun	0.517	1.0	0.944	5e-32
307178580	72	Guanine nucleotide-binding protein subun	0.517	1.0	0.930	7e-32
58392078	72	AGAP009953-PA [Anopheles gambiae str. PE	0.517	1.0	0.916	9e-32
193603534	72	PREDICTED: guanine nucleotide-binding pr	0.517	1.0	0.875	3e-31
383852880	72	PREDICTED: guanine nucleotide-binding pr	0.517	1.0	0.930	3e-31
379991104	72	G protein gamma subunit [Bombyx mori] gi	0.517	1.0	0.902	4e-31
189238236	72	PREDICTED: similar to AGAP009953-PA [Tri	0.517	1.0	0.916	5e-31
156547834	72	PREDICTED: guanine nucleotide-binding pr	0.517	1.0	0.916	6e-31
340724239	72	PREDICTED: guanine nucleotide-binding pr	0.517	1.0	0.916	2e-30
357626750	72	hypothetical protein KGM_06280 [Danaus p	0.517	1.0	0.888	4e-30

>gi|307214704|gb|EFN89633.1| Guanine nucleotide-binding protein subunit gamma-e [Harpegnathos saltator]

 Score =  142 bits (358), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 68/72 (94%), Positives = 69/72 (95%)

Query: 68  MDPSVLAAMDKDALKKQIENMKYQATMERWPLSKSIQAMREYVEENEKNDPLIHAPDKKN 127
           MDPSVLA MDKDALKKQIENMKYQA+MERWPLSKSI AMREYVEENEKNDPLIHAPDKKN
Sbjct: 1   MDPSVLATMDKDALKKQIENMKYQASMERWPLSKSIAAMREYVEENEKNDPLIHAPDKKN 60

Query: 128 NPWAEKGKCSIM 139
           NPWAEKGKC IM
Sbjct: 61  NPWAEKGKCIIM 72

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307178580|gb|EFN67256.1| Guanine nucleotide-binding protein subunit gamma-e [Camponotus floridanus]

 Score =  141 bits (356), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 67/72 (93%), Positives = 69/72 (95%)

Query: 68  MDPSVLAAMDKDALKKQIENMKYQATMERWPLSKSIQAMREYVEENEKNDPLIHAPDKKN 127
           MDPS+LA MDKDALKKQIENMKYQA+MERWPLSKSI AMREYVEENEKNDPLIHAPDKKN
Sbjct: 1   MDPSILATMDKDALKKQIENMKYQASMERWPLSKSIAAMREYVEENEKNDPLIHAPDKKN 60

Query: 128 NPWAEKGKCSIM 139
           NPWAEKGKC IM
Sbjct: 61  NPWAEKGKCIIM 72

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|58392078|ref|XP_319087.2| AGAP009953-PA [Anopheles gambiae str. PEST] gi|157114007|ref|XP_001657939.1| G-protein, gamma-subunit, putative [Aedes aegypti] gi|170028361|ref|XP_001842064.1| G-protein, gamma-subunit [Culex quinquefasciatus] gi|55236170|gb|EAA13974.3| AGAP009953-PA [Anopheles gambiae str. PEST] gi|108877491|gb|EAT41716.1| AAEL006685-PA [Aedes aegypti] gi|167874219|gb|EDS37602.1| G-protein, gamma-subunit [Culex quinquefasciatus]

 Score =  141 bits (356), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 66/72 (91%), Positives = 69/72 (95%)

Query: 68  MDPSVLAAMDKDALKKQIENMKYQATMERWPLSKSIQAMREYVEENEKNDPLIHAPDKKN 127
           MDPS+LA MD+DALKKQIENMKYQA+MERWPLSKSI AMREYVEENEKNDPLIHAPDKKN
Sbjct: 1   MDPSILATMDRDALKKQIENMKYQASMERWPLSKSIAAMREYVEENEKNDPLIHAPDKKN 60

Query: 128 NPWAEKGKCSIM 139
           NPWAEKGKC IM
Sbjct: 61  NPWAEKGKCVIM 72

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|193603534|ref|XP_001947836.1| PREDICTED: guanine nucleotide-binding protein subunit gamma-e-like [Acyrthosiphon pisum]

 Score =  139 bits (351), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 63/72 (87%), Positives = 70/72 (97%)

Query: 68  MDPSVLAAMDKDALKKQIENMKYQATMERWPLSKSIQAMREYVEENEKNDPLIHAPDKKN 127
           MDPSVL+AMD+DALKKQIENM+YQ+TM+RWPLS+SIQAMRE+VEENEK DPLIHAPDKKN
Sbjct: 1   MDPSVLSAMDRDALKKQIENMRYQSTMDRWPLSRSIQAMREFVEENEKTDPLIHAPDKKN 60

Query: 128 NPWAEKGKCSIM 139
           NPWAEKGKC IM
Sbjct: 61  NPWAEKGKCVIM 72

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383852880|ref|XP_003701953.1| PREDICTED: guanine nucleotide-binding protein subunit gamma-e-like [Megachile rotundata]

 Score =  139 bits (350), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 67/72 (93%), Positives = 68/72 (94%)

Query: 68  MDPSVLAAMDKDALKKQIENMKYQATMERWPLSKSIQAMREYVEENEKNDPLIHAPDKKN 127
           MDPSVLA MDKDALKKQIENMKYQA+MERWPLSKSI AMREYVEENEK DPLIHAPDKKN
Sbjct: 1   MDPSVLANMDKDALKKQIENMKYQASMERWPLSKSIAAMREYVEENEKTDPLIHAPDKKN 60

Query: 128 NPWAEKGKCSIM 139
           NPWAEKGKC IM
Sbjct: 61  NPWAEKGKCIIM 72

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|379991104|ref|NP_001243986.1| G protein gamma subunit [Bombyx mori] gi|338807801|gb|AEJ07664.1| G protein gamma subunit [Bombyx mori]

 Score =  139 bits (350), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 65/72 (90%), Positives = 70/72 (97%)

Query: 68  MDPSVLAAMDKDALKKQIENMKYQATMERWPLSKSIQAMREYVEENEKNDPLIHAPDKKN 127
           MDPS+LAAMDK+ALKKQIENMKYQA+M+RWPLS+SI AMREYVEENEKNDPLIHAPDKKN
Sbjct: 1   MDPSILAAMDKEALKKQIENMKYQASMDRWPLSRSIAAMREYVEENEKNDPLIHAPDKKN 60

Query: 128 NPWAEKGKCSIM 139
           NPWAEKGKC IM
Sbjct: 61  NPWAEKGKCIIM 72

Source: Bombyx mori

Species: Bombyx mori

Genus: Bombyx

Family: Bombycidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|189238236|ref|XP_972123.2| PREDICTED: similar to AGAP009953-PA [Tribolium castaneum] gi|270008671|gb|EFA05119.1| hypothetical protein TcasGA2_TC015232 [Tribolium castaneum]

 Score =  139 bits (349), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 66/72 (91%), Positives = 68/72 (94%)

Query: 68  MDPSVLAAMDKDALKKQIENMKYQATMERWPLSKSIQAMREYVEENEKNDPLIHAPDKKN 127
           MD S L+AMDKDALKKQIENMKYQA+MERWPLSKSI AMREYVEENEKNDPLIHAPDKKN
Sbjct: 1   MDASTLSAMDKDALKKQIENMKYQASMERWPLSKSIAAMREYVEENEKNDPLIHAPDKKN 60

Query: 128 NPWAEKGKCSIM 139
           NPWAEKGKC IM
Sbjct: 61  NPWAEKGKCVIM 72

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|156547834|ref|XP_001601274.1| PREDICTED: guanine nucleotide-binding protein subunit gamma-e [Nasonia vitripennis]

 Score =  138 bits (348), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 66/72 (91%), Positives = 68/72 (94%)

Query: 68  MDPSVLAAMDKDALKKQIENMKYQATMERWPLSKSIQAMREYVEENEKNDPLIHAPDKKN 127
           MDPSVLA MDKDAL+KQIENMKYQA M+RWPLSKSI AMREYVEENEKNDPLIHAPDKKN
Sbjct: 1   MDPSVLANMDKDALRKQIENMKYQANMDRWPLSKSIAAMREYVEENEKNDPLIHAPDKKN 60

Query: 128 NPWAEKGKCSIM 139
           NPWAEKGKC IM
Sbjct: 61  NPWAEKGKCIIM 72

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340724239|ref|XP_003400491.1| PREDICTED: guanine nucleotide-binding protein subunit gamma-e-like [Bombus terrestris] gi|350420799|ref|XP_003492629.1| PREDICTED: guanine nucleotide-binding protein subunit gamma-e-like [Bombus impatiens]

 Score =  137 bits (344), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 66/72 (91%), Positives = 67/72 (93%)

Query: 68  MDPSVLAAMDKDALKKQIENMKYQATMERWPLSKSIQAMREYVEENEKNDPLIHAPDKKN 127
           MDPSVLA MDKDALKKQIENMKYQA MERWPLSKSI AMREYVEENEK DPLIHAPDKKN
Sbjct: 1   MDPSVLANMDKDALKKQIENMKYQADMERWPLSKSIVAMREYVEENEKTDPLIHAPDKKN 60

Query: 128 NPWAEKGKCSIM 139
           NPWAE+GKC IM
Sbjct: 61  NPWAERGKCIIM 72

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|357626750|gb|EHJ76711.1| hypothetical protein KGM_06280 [Danaus plexippus]

 Score =  135 bits (341), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 64/72 (88%), Positives = 67/72 (93%)

Query: 68  MDPSVLAAMDKDALKKQIENMKYQATMERWPLSKSIQAMREYVEENEKNDPLIHAPDKKN 127
           MD S+LA MDK+ALKKQIENMKYQA+MERWPLSKSI  MREYVEENEKNDPLIHAPDKKN
Sbjct: 1   MDASILATMDKEALKKQIENMKYQASMERWPLSKSIAVMREYVEENEKNDPLIHAPDKKN 60

Query: 128 NPWAEKGKCSIM 139
           NPWAEKGKC IM
Sbjct: 61  NPWAEKGKCIIM 72

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	139
FB|FBgn0028433	72	Ggamma30A "G protein gamma30A"	0.517	1.0	0.833	1.6e-29
UNIPROTKB|E1B8Q3	67	GNG13 "Uncharacterized protein	0.446	0.925	0.437	1.5e-10
UNIPROTKB|Q9P2W3	67	GNG13 "Guanine nucleotide-bind	0.446	0.925	0.421	2e-10
WB|WBGene00001682	62	gpc-2 [Caenorhabditis elegans	0.446	1.0	0.406	2.5e-10
UNIPROTKB|E2R7K4	67	GNG13 "Uncharacterized protein	0.446	0.925	0.421	3.2e-10
UNIPROTKB|F1RG32	67	GNG13 "Uncharacterized protein	0.446	0.925	0.421	3.2e-10
ZFIN|ZDB-GENE-040718-97	67	gng13b "guanine nucleotide bin	0.460	0.955	0.390	5.2e-10
UNIPROTKB|E1C1U6	67	GNG13 "Uncharacterized protein	0.453	0.940	0.412	1.1e-09
MGI|MGI:1925616	67	Gng13 "guanine nucleotide bind	0.446	0.925	0.406	1.4e-09
UNIPROTKB|G3V8Y0	67	Gng13 "RCG32756" [Rattus norve	0.446	0.925	0.406	1.4e-09

FB|FBgn0028433 Ggamma30A "G protein gamma30A" [Drosophila melanogaster (taxid:7227)]

 Score = 327 (120.2 bits), Expect = 1.6e-29, P = 1.6e-29
 Identities = 60/72 (83%), Positives = 65/72 (90%)

Query:    68 MDPSVLAAMDKDALKKQIENMKYQATMERWPLSKSIQAMREYVEENEKNDPLIHAPDKKN 127
             MDPS L  MD+DALKKQIENMKYQA+MERWPLSKSI  MR ++EENEKNDPLI+APDKKN
Sbjct:     1 MDPSALQNMDRDALKKQIENMKYQASMERWPLSKSIAEMRSFIEENEKNDPLINAPDKKN 60

Query:   128 NPWAEKGKCSIM 139
             NPWAEKGKC IM
Sbjct:    61 NPWAEKGKCVIM 72

GO:0007186 "G-protein coupled receptor signaling pathway" evidence=IEA;NAS

GO:0005834 "heterotrimeric G-protein complex" evidence=NAS;IPI

GO:0003924 "GTPase activity" evidence=NAS

GO:0007602 "phototransduction" evidence=IPI

GO:0005737 "cytoplasm" evidence=IDA

GO:0046982 "protein heterodimerization activity" evidence=IPI

GO:0016028 "rhabdomere" evidence=IDA

GO:0004871 "signal transducer activity" evidence=IEA

GO:0071244 "cellular response to carbon dioxide" evidence=IMP

GO:0005886 "plasma membrane" evidence=IDA

UNIPROTKB|E1B8Q3 GNG13 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 148 (57.2 bits), Expect = 1.5e-10, P = 1.5e-10
 Identities = 28/64 (43%), Positives = 43/64 (67%)

Query:    77 DKDALKKQIENMKYQATMERWPLSKSIQAMREYVEENEKNDPLIHAPD-KKNNPWAEKGK 135
             D   +KK++E++KYQ   +R   SK+I  + +++EE    DP ++ PD  KNNPW EKGK
Sbjct:     5 DVPQMKKEVESLKYQLAFKREMSSKTIPELLKWIEEGIPKDPFLN-PDLMKNNPWVEKGK 63

Query:   136 CSIM 139
             C+I+
Sbjct:    64 CAIL 67

GO:0050909 "sensory perception of taste" evidence=IEA

GO:0007200 "phospholipase C-activating G-protein coupled receptor signaling pathway" evidence=IEA

GO:0005834 "heterotrimeric G-protein complex" evidence=IEA

GO:0004871 "signal transducer activity" evidence=IEA

UNIPROTKB|Q9P2W3 GNG13 "Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-13" [Homo sapiens (taxid:9606)]

 Score = 147 (56.8 bits), Expect = 2.0e-10, P = 2.0e-10
 Identities = 27/64 (42%), Positives = 43/64 (67%)

Query:    77 DKDALKKQIENMKYQATMERWPLSKSIQAMREYVEENEKNDPLIHAPD-KKNNPWAEKGK 135
             D   +KK++E++KYQ   +R   SK+I  + +++E+    DP ++ PD  KNNPW EKGK
Sbjct:     5 DVPQMKKEVESLKYQLAFQREMASKTIPELLKWIEDGIPKDPFLN-PDLMKNNPWVEKGK 63

Query:   136 CSIM 139
             C+I+
Sbjct:    64 CTIL 67

GO:0004871 "signal transducer activity" evidence=IEA

GO:0005834 "heterotrimeric G-protein complex" evidence=IEA

GO:0007200 "phospholipase C-activating G-protein coupled receptor signaling pathway" evidence=IEA

GO:0050909 "sensory perception of taste" evidence=IEA

GO:0005886 "plasma membrane" evidence=TAS

GO:0006112 "energy reserve metabolic process" evidence=TAS

GO:0044281 "small molecule metabolic process" evidence=TAS

GO:0071377 "cellular response to glucagon stimulus" evidence=TAS

WB|WBGene00001682 gpc-2 [Caenorhabditis elegans (taxid:6239)]

 Score = 146 (56.5 bits), Expect = 2.5e-10, P = 2.5e-10
 Identities = 26/64 (40%), Positives = 43/64 (67%)

Query:    76 MDKDALKKQIENMKYQATMERWPLSKSIQAMREYVEENEKNDPLIHAPDKKNNPWAEKGK 135
             MDK  +++ +++++ Q  +ER P++ S   +R + E  E  DPL++  DKK NPWAEK K
Sbjct:     1 MDKSDMQRTVDSLRSQLNIERTPITVSAAELRRFTESQE--DPLVNPIDKKVNPWAEKSK 58

Query:   136 CSIM 139
             CS++
Sbjct:    59 CSML 62

GO:0004871 "signal transducer activity" evidence=IEA

GO:0005834 "heterotrimeric G-protein complex" evidence=IEA

GO:0007186 "G-protein coupled receptor signaling pathway" evidence=IEA

GO:0009792 "embryo development ending in birth or egg hatching" evidence=IMP

GO:0035046 "pronuclear migration" evidence=IMP

GO:0000003 "reproduction" evidence=IMP

UNIPROTKB|E2R7K4 GNG13 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 145 (56.1 bits), Expect = 3.2e-10, P = 3.2e-10
 Identities = 27/64 (42%), Positives = 43/64 (67%)

Query:    77 DKDALKKQIENMKYQATMERWPLSKSIQAMREYVEENEKNDPLIHAPD-KKNNPWAEKGK 135
             D   +KK++E++KYQ   +R   SK+I  + +++E+    DP ++ PD  KNNPW EKGK
Sbjct:     5 DVPQMKKEVESLKYQLAFKREMSSKTIPELLKWIEDGIPKDPFLN-PDLMKNNPWVEKGK 63

Query:   136 CSIM 139
             C+I+
Sbjct:    64 CAIL 67

GO:0050909 "sensory perception of taste" evidence=IEA

GO:0007200 "phospholipase C-activating G-protein coupled receptor signaling pathway" evidence=IEA

GO:0005834 "heterotrimeric G-protein complex" evidence=IEA

GO:0004871 "signal transducer activity" evidence=IEA

UNIPROTKB|F1RG32 GNG13 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 145 (56.1 bits), Expect = 3.2e-10, P = 3.2e-10
 Identities = 27/64 (42%), Positives = 43/64 (67%)

Query:    77 DKDALKKQIENMKYQATMERWPLSKSIQAMREYVEENEKNDPLIHAPD-KKNNPWAEKGK 135
             D   +KK++E++KYQ   +R   SK+I  + +++EE    DP ++ PD  K+NPW EKGK
Sbjct:     5 DVPQMKKEVESLKYQLAFQRETSSKTIPELLKWIEEGIPKDPFLN-PDLMKSNPWVEKGK 63

Query:   136 CSIM 139
             C+I+
Sbjct:    64 CAIL 67

GO:0050909 "sensory perception of taste" evidence=IEA

GO:0007200 "phospholipase C-activating G-protein coupled receptor signaling pathway" evidence=IEA

GO:0005834 "heterotrimeric G-protein complex" evidence=IEA

GO:0004871 "signal transducer activity" evidence=IEA

ZFIN|ZDB-GENE-040718-97 gng13b "guanine nucleotide binding protein (G protein), gamma 13b" [Danio rerio (taxid:7955)]

 Score = 143 (55.4 bits), Expect = 5.2e-10, P = 5.2e-10
 Identities = 25/64 (39%), Positives = 41/64 (64%)

Query:    76 MDKDALKKQIENMKYQATMERWPLSKSIQAMREYVEENEKNDPLIHAPDKKNNPWAEKGK 135
             MD   +KK++E++KYQ   +R   SK++  + +++EE    DP ++    KNNPW EKGK
Sbjct:     4 MDLPQMKKEVESLKYQLAFKREKSSKTVTDLVKWIEECVPEDPFLNPELMKNNPWVEKGK 63

Query:   136 CSIM 139
             C ++
Sbjct:    64 CVLL 67

GO:0005834 "heterotrimeric G-protein complex" evidence=IEA

GO:0007186 "G-protein coupled receptor signaling pathway" evidence=IEA

GO:0004871 "signal transducer activity" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

GO:0016020 "membrane" evidence=IEA

UNIPROTKB|E1C1U6 GNG13 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 140 (54.3 bits), Expect = 1.1e-09, P = 1.1e-09
 Identities = 26/63 (41%), Positives = 39/63 (61%)

Query:    77 DKDALKKQIENMKYQATMERWPLSKSIQAMREYVEENEKNDPLIHAPDKKNNPWAEKGKC 136
             D    KK++E++KYQ   +R   SK+I    +++E+    DP ++    KNNPW EKGKC
Sbjct:     5 DLSQWKKEVESLKYQLAYKREMSSKTIPEFVKWIEDGIPEDPFLNPELMKNNPWVEKGKC 64

Query:   137 SIM 139
             SI+
Sbjct:    65 SIL 67

GO:0004871 "signal transducer activity" evidence=IEA

GO:0005834 "heterotrimeric G-protein complex" evidence=IEA

GO:0007200 "phospholipase C-activating G-protein coupled receptor signaling pathway" evidence=IEA

GO:0050909 "sensory perception of taste" evidence=IEA

MGI|MGI:1925616 Gng13 "guanine nucleotide binding protein (G protein), gamma 13" [Mus musculus (taxid:10090)]

 Score = 139 (54.0 bits), Expect = 1.4e-09, P = 1.4e-09
 Identities = 26/64 (40%), Positives = 42/64 (65%)

Query:    77 DKDALKKQIENMKYQATMERWPLSKSIQAMREYVEENEKNDPLIHAPD-KKNNPWAEKGK 135
             D   +KK++E++KYQ   +R   SK+I  + +++E+    DP ++ PD  KNNPW EK K
Sbjct:     5 DVPQMKKEVESLKYQLAFKREMSSKTIPELLKWIEDGIPKDPFLN-PDLMKNNPWVEKAK 63

Query:   136 CSIM 139
             C+I+
Sbjct:    64 CTIL 67

GO:0004871 "signal transducer activity" evidence=IEA

GO:0005834 "heterotrimeric G-protein complex" evidence=IPI

GO:0005886 "plasma membrane" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

GO:0007186 "G-protein coupled receptor signaling pathway" evidence=IEA

GO:0007200 "phospholipase C-activating G-protein coupled receptor signaling pathway" evidence=IDA

GO:0016020 "membrane" evidence=TAS

GO:0050909 "sensory perception of taste" evidence=IDA

UNIPROTKB|G3V8Y0 Gng13 "RCG32756" [Rattus norvegicus (taxid:10116)]

 Score = 139 (54.0 bits), Expect = 1.4e-09, P = 1.4e-09
 Identities = 26/64 (40%), Positives = 42/64 (65%)

Query:    77 DKDALKKQIENMKYQATMERWPLSKSIQAMREYVEENEKNDPLIHAPD-KKNNPWAEKGK 135
             D   +KK++E++KYQ   +R   SK+I  + +++E+    DP ++ PD  KNNPW EK K
Sbjct:     5 DVPQMKKEVESLKYQLAFKREMSSKTIPELLKWIEDGIPKDPFLN-PDLMKNNPWVEKAK 63

Query:   136 CSIM 139
             C+I+
Sbjct:    64 CTIL 67

GO:0004871 "signal transducer activity" evidence=IEA

GO:0005834 "heterotrimeric G-protein complex" evidence=IEA

GO:0007200 "phospholipase C-activating G-protein coupled receptor signaling pathway" evidence=IEA

GO:0050909 "sensory perception of taste" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9NFZ3	GBGE_DROME	No assigned EC number	0.8333	0.5179	1.0	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	139
cd00068	57	cd00068, GGL, G protein gamma subunit-like motifs,	4e-17
pfam00631	69	pfam00631, G-gamma, GGL domain	3e-16
smart00224	63	smart00224, GGL, G protein gamma subunit-like moti	4e-13
cd00068	57	cd00068, GGL, G protein gamma subunit-like motifs,	0.004

>gnl|CDD|238024 cd00068, GGL, G protein gamma subunit-like motifs, the alpha-helical G-gamma chain dimerizes with the G-beta propeller subunit as part of the heterotrimeric G-protein complex; involved in signal transduction via G-protein-coupled receptors

 Score = 70.0 bits (172), Expect = 4e-17
 Identities = 22/57 (38%), Positives = 36/57 (63%)

Query: 78  KDALKKQIENMKYQATMERWPLSKSIQAMREYVEENEKNDPLIHAPDKKNNPWAEKG 134
            D LKK++E ++ + + ER  +SK+   + +Y E+N +NDPL+  P   +NPW EK 
Sbjct: 1   VDQLKKEVEQLRKELSRERLKVSKAAAELLKYCEQNAENDPLLTGPPSPSNPWIEKK 57

Length = 57

>gnl|CDD|216034 pfam00631, G-gamma, GGL domain

 Score = 68.1 bits (167), Expect = 3e-16
 Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 3/68 (4%)

Query: 75  AMDKDALKKQIENMKYQATMERWPLSKSIQAMREYVEENEKNDPLIHA--PDKKNNPWAE 132
           +  K  LK++IE +K +   ER  +SK+ + + +Y E+    DPL+    P  K NPW E
Sbjct: 2   SQLKLRLKREIEQLKEELERERIKVSKACKELIDYCEQRSTKDPLLPGVWPPNKENPWIE 61

Query: 133 K-GKCSIM 139
           K G C I+
Sbjct: 62  KDGCCWIL 69

G-protein gamma like domains (GGL) are found in the gamma subunit of the heterotrimeric G protein complex and in regulators of G protein signaling (RGS) proteins. It is also found fused to an inactive Galpha in the Dictyostelium protein gbqA. G-gamma likely shares a common origin with the helical N-terminal unit of G-beta. All organisms that posses a G-beta possess a G-gamma. Length = 69

>gnl|CDD|128520 smart00224, GGL, G protein gamma subunit-like motifs

 Score = 59.6 bits (145), Expect = 4e-13
 Identities = 21/63 (33%), Positives = 38/63 (60%), Gaps = 1/63 (1%)

Query: 78  KDALKKQIENMKYQATMERWPLSKSIQAMREYVEENEKNDPLIHAPDKKNNPWAE-KGKC 136
           KD L+K++E ++ + + ER  +SK+ + +  Y E++ + DPL+  P    NP+ E K  C
Sbjct: 1   KDQLRKEVEQLRKELSRERIKVSKAAEELLAYCEQHAEEDPLLTGPPPSKNPFIEDKTSC 60

Query: 137 SIM 139
            I+
Sbjct: 61  WIL 63

Length = 63

>gnl|CDD|238024 cd00068, GGL, G protein gamma subunit-like motifs, the alpha-helical G-gamma chain dimerizes with the G-beta propeller subunit as part of the heterotrimeric G-protein complex; involved in signal transduction via G-protein-coupled receptors

 Score = 33.4 bits (77), Expect = 0.004
 Identities = 10/30 (33%), Positives = 18/30 (60%)

Query: 11 KDALKKQIENMKYQATMERWPLSKSIQAYL 40
           D LKK++E ++ + + ER  +SK+    L
Sbjct: 1  VDQLKKEVEQLRKELSRERLKVSKAAAELL 30

Length = 57

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	139
smart00224	63	GGL G protein gamma subunit-like motifs.	99.91
cd00068	57	GGL G protein gamma subunit-like motifs, the alpha	99.9
KOG4119|consensus	71		99.89
PF00631	68	G-gamma: GGL domain; InterPro: IPR015898 This entr	99.77
KOG4119|consensus	71		98.84
cd00068	57	GGL G protein gamma subunit-like motifs, the alpha	98.64
smart00224	63	GGL G protein gamma subunit-like motifs.	98.59
PF00631	68	G-gamma: GGL domain; InterPro: IPR015898 This entr	98.16

>smart00224 GGL G protein gamma subunit-like motifs

Probab=99.91  E-value=5e-25  Score=148.45  Aligned_cols=61  Identities=33%  Similarity=0.660  Sum_probs=58.4

Q ss_pred             HHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHhhCCCCCCCCCCCCCCCCCCC-CCCcccC
Q psy10947         79 DALKKQIENMKYQATMERWPLSKSIQAMREYVEENEKNDPLIHAPDKKNNPWAE-KGKCSIM  139 (139)
Q Consensus        79 ~~lkk~VeqLr~el~~~RiKVS~aa~~Li~Yceq~~~~DPLL~g~~~~sNPf~e-k~~C~il  139 (139)
                      ++++++|+|||.+|+++|||||+||++|++||++|..+||||.|++++.|||++ |++|.+|
T Consensus         2 ~~~~~~ve~Lr~el~~~RikvS~a~~~li~y~e~~~~~DP~l~g~~~~~NP~~~dk~~c~~l   63 (63)
T smart00224        2 DQLRKEVEQLRKELSRERIKVSKAAEELLAYCEQHAEEDPLLTGPPPSKNPFIEDKTSCWIL   63 (63)
T ss_pred             hHHHHHHHHHHHHHCCceehHHHHHHHHHHHHHcCCCCCCCcCCCCCCCCCCCCCCCCcCcC
Confidence            689999999999999999999999999999999999999999999987799999 8899886

>cd00068 GGL G protein gamma subunit-like motifs, the alpha-helical G-gamma chain dimerizes with the G-beta propeller subunit as part of the heterotrimeric G-protein complex; involved in signal transduction via G-protein-coupled receptors

Probab=99.90  E-value=9.5e-24  Score=139.77  Aligned_cols=56  Identities=39%  Similarity=0.731  Sum_probs=53.5

Q ss_pred             HHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHhhCCCCCCCCCCCCCCCCCCCCC
Q psy10947         79 DALKKQIENMKYQATMERWPLSKSIQAMREYVEENEKNDPLIHAPDKKNNPWAEKG  134 (139)
Q Consensus        79 ~~lkk~VeqLr~el~~~RiKVS~aa~~Li~Yceq~~~~DPLL~g~~~~sNPf~ek~  134 (139)
                      ++++++|+|||.+++++|||||+||++|++||++|+++||||.|++..+|||++++
T Consensus         2 ~~~~~~veqLr~el~~~RikvS~a~~~l~~y~e~~~~~Dpll~g~~~~~NP~~~~~   57 (57)
T cd00068           2 DQLKKEVEQLRKELSRERLKVSKAAAELLKYCEQNAENDPLLTGPPSPSNPWIEKK   57 (57)
T ss_pred             HHHHHHHHHHHHHHCCchhhHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCCc
Confidence            68999999999999999999999999999999999999999999996689999974

>KOG4119|consensus

Probab=99.89  E-value=9.8e-24  Score=146.26  Aligned_cols=63  Identities=38%  Similarity=0.681  Sum_probs=60.0

Q ss_pred             CHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHhhCCCCCCCCCCCCCCCCCCCCCC-cccC
Q psy10947         77 DKDALKKQIENMKYQATMERWPLSKSIQAMREYVEENEKNDPLIHAPDKKNNPWAEKGK-CSIM  139 (139)
Q Consensus        77 ~~~~lkk~VeqLr~el~~~RiKVS~aa~~Li~Yceq~~~~DPLL~g~~~~sNPf~ek~~-C~il  139 (139)
                      ++.++|+.|||||.|++++|++||+|+++|++|||+|+++|||+.|++.+.|||+|+++ |+||
T Consensus         8 ~~~q~k~~VeqLk~e~~~~R~~vS~a~~el~~y~E~~~~~DpLl~gv~~~~NPf~e~K~~Csil   71 (71)
T KOG4119|consen    8 KKPQMKKEVEQLKLEANIERIKVSKAAAELLEYCETHATEDPLLEGVPEKENPFREKKSVCSIL   71 (71)
T ss_pred             chHHHHHHHHHHHHHHHhhHhhHHHHHHHHHHHHHhcCccCccccCCccccCCCcccCCCcccC
Confidence            48999999999999999999999999999999999999999999999999999999655 9986

>PF00631 G-gamma: GGL domain; InterPro: IPR015898 This entry represents the G protein gamma subunit and the GGL (G protein gamma-like) domain, which are related in sequence and are comprised of an extended alpha-helical polypeptide

Probab=99.77  E-value=8.1e-20  Score=123.69  Aligned_cols=61  Identities=41%  Similarity=0.767  Sum_probs=47.9

Q ss_pred             CHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHhhCCCCCCCCCC----CCCCCCCCCC-CCcccC
Q psy10947         77 DKDALKKQIENMKYQATMERWPLSKSIQAMREYVEENEKNDPLIHAP----DKKNNPWAEK-GKCSIM  139 (139)
Q Consensus        77 ~~~~lkk~VeqLr~el~~~RiKVS~aa~~Li~Yceq~~~~DPLL~g~----~~~sNPf~ek-~~C~il  139 (139)
                      .+++++++|++||.|++++|+|||+|+++|++||+  +.+||||.++    ..+.|||+++ +.|.+|
T Consensus         3 ~~~~l~~ei~~L~~el~~~r~~vS~a~~~li~y~~--~~~DPll~~~~~p~~~~~NPw~~~~~~C~il   68 (68)
T PF00631_consen    3 EKDQLKREIEQLRQELERERIKVSKACKELIEYCE--STPDPLLPGPWGPPSSSSNPWIEKDGCCWIL   68 (68)
T ss_dssp             HHHHHHHHHHHHHHHHTS----HHHHHHHHHHHHH--GTC-HHHHT--SS--GGGSTTCC-STHHHHH
T ss_pred             HHHHHHHHHHHHHHHHcccceeHHHHHHHHHHHhc--CCCCceeCCCCCCCCccCCCCcCCCCCeeeC
Confidence            57899999999999999999999999999999999  7799999877    4678999999 558764

The G protein gamma subunit forms a stable dimer with the beta subunit, but it does not make any contact with the alpha subunit, which contacts the opposite face of the beta subunit. The GGL domain is found in several RGS (regulators of G protein signaling) proteins. GGL domains can interact with beta subunits to form novel dimers that prevent gamma subunit binding, and may prevent heterotrimer formation by inhibiting alpha subunit binding. The interaction between G protein beta-5 neuro-specific isoforms and RGS GGL domains may represent a general mode of binding between beta-propeller proteins and their partners [].; GO: 0004871 signal transducer activity, 0007186 G-protein coupled receptor protein signaling pathway, 0005834 heterotrimeric G-protein complex; PDB: 3PSC_G 3SN6_G 1OMW_G 2BCJ_G 1GG2_G 3PVW_G 3PVU_G 3AH8_G 3CIK_G 1GP2_G ....

>KOG4119|consensus

Probab=98.84  E-value=2.1e-09  Score=74.77  Aligned_cols=37  Identities=30%  Similarity=0.409  Sum_probs=33.6

Q ss_pred             cccCHHHHHHHHHhhhhhhccccchHhHHHHHhhccc
Q psy10947          7 AAMDKDALKKQIENMKYQATMERWPLSKSIQAYLVPT   43 (139)
Q Consensus         7 ~~~~~~~~r~~veQLr~Ea~~~R~~VSka~~dl~~~~   43 (139)
                      ..+++.|+|++|||||.||+++|++||+|++||+...
T Consensus         5 ~~~~~~q~k~~VeqLk~e~~~~R~~vS~a~~el~~y~   41 (71)
T KOG4119|consen    5 SNSKKPQMKKEVEQLKLEANIERIKVSKAAAELLEYC   41 (71)
T ss_pred             cccchHHHHHHHHHHHHHHHhhHhhHHHHHHHHHHHH
Confidence            4456999999999999999999999999999999754

>cd00068 GGL G protein gamma subunit-like motifs, the alpha-helical G-gamma chain dimerizes with the G-beta propeller subunit as part of the heterotrimeric G-protein complex; involved in signal transduction via G-protein-coupled receptors

Probab=98.64  E-value=1.8e-08  Score=66.66  Aligned_cols=34  Identities=29%  Similarity=0.345  Sum_probs=31.2

Q ss_pred             HHHHHHHHHhhhhhhccccchHhHHHHHhhcccc
Q psy10947         11 KDALKKQIENMKYQATMERWPLSKSIQAYLVPTF   44 (139)
Q Consensus        11 ~~~~r~~veQLr~Ea~~~R~~VSka~~dl~~~~~   44 (139)
                      ++++|++|||||.|++++|+|||+||++|+..+-
T Consensus         1 ~~~~~~~veqLr~el~~~RikvS~a~~~l~~y~e   34 (57)
T cd00068           1 VDQLKKEVEQLRKELSRERLKVSKAAAELLKYCE   34 (57)
T ss_pred             CHHHHHHHHHHHHHHCCchhhHHHHHHHHHHHHH
Confidence            3689999999999999999999999999998753

>smart00224 GGL G protein gamma subunit-like motifs

Probab=98.59  E-value=2.8e-08  Score=66.92  Aligned_cols=34  Identities=29%  Similarity=0.414  Sum_probs=31.2

Q ss_pred             HHHHHHHHHhhhhhhccccchHhHHHHHhhcccc
Q psy10947         11 KDALKKQIENMKYQATMERWPLSKSIQAYLVPTF   44 (139)
Q Consensus        11 ~~~~r~~veQLr~Ea~~~R~~VSka~~dl~~~~~   44 (139)
                      ++++|++|||||.|++++|+|||+|+++|+..+-
T Consensus         1 ~~~~~~~ve~Lr~el~~~RikvS~a~~~li~y~e   34 (63)
T smart00224        1 KDQLRKEVEQLRKELSRERIKVSKAAEELLAYCE   34 (63)
T ss_pred             ChHHHHHHHHHHHHHCCceehHHHHHHHHHHHHH
Confidence            3789999999999999999999999999998753

>PF00631 G-gamma: GGL domain; InterPro: IPR015898 This entry represents the G protein gamma subunit and the GGL (G protein gamma-like) domain, which are related in sequence and are comprised of an extended alpha-helical polypeptide

Probab=98.16  E-value=1.6e-06  Score=58.59  Aligned_cols=35  Identities=29%  Similarity=0.417  Sum_probs=28.4

Q ss_pred             cCHHHHHHHHHhhhhhhccccchHhHHHHHhhccc
Q psy10947          9 MDKDALKKQIENMKYQATMERWPLSKSIQAYLVPT   43 (139)
Q Consensus         9 ~~~~~~r~~veQLr~Ea~~~R~~VSka~~dl~~~~   43 (139)
                      ..+++++++|++||.|++.+|++||+|+++|+...
T Consensus         2 ~~~~~l~~ei~~L~~el~~~r~~vS~a~~~li~y~   36 (68)
T PF00631_consen    2 QEKDQLKREIEQLRQELERERIKVSKACKELIEYC   36 (68)
T ss_dssp             THHHHHHHHHHHHHHHHTS----HHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHcccceeHHHHHHHHHHHh
Confidence            35789999999999999999999999999999875

The G protein gamma subunit forms a stable dimer with the beta subunit, but it does not make any contact with the alpha subunit, which contacts the opposite face of the beta subunit. The GGL domain is found in several RGS (regulators of G protein signaling) proteins. GGL domains can interact with beta subunits to form novel dimers that prevent gamma subunit binding, and may prevent heterotrimer formation by inhibiting alpha subunit binding. The interaction between G protein beta-5 neuro-specific isoforms and RGS GGL domains may represent a general mode of binding between beta-propeller proteins and their partners [].; GO: 0004871 signal transducer activity, 0007186 G-protein coupled receptor protein signaling pathway, 0005834 heterotrimeric G-protein complex; PDB: 3PSC_G 3SN6_G 1OMW_G 2BCJ_G 1GG2_G 3PVW_G 3PVU_G 3AH8_G 3CIK_G 1GP2_G ....

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	139
2trc_G	68	PhosducinTRANSDUCIN BETA-Gamma Complex Length = 68		2e-06
1tbg_E	68	Beta-Gamma Dimer Of The Heterotrimeric G-Protein Tr		2e-06
1a0r_G	65	Heterotrimeric Complex Of PhosducinTRANSDUCIN BETA-		3e-06
1got_G	73	Heterotrimeric Complex Of A Gt-AlphaGI-Alpha Chimer		3e-06
3ah8_G	78	Structure Of Heterotrimeric G Protein Galpha-Q Beta		5e-05

>pdb|2TRC|G Chain G, PhosducinTRANSDUCIN BETA-Gamma Complex Length = 68

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 21/56 (37%), Positives = 34/56 (60%)
Query: 77  DKDALKKQIENMKYQATMERWPLSKSIQAMREYVEENEKNDPLIHAPDKKNNPWAE 132
           +KD LK +++ +K + T+ER  +SK  +  R+YVEE    DPL+    +  NP+ E
Sbjct: 11  EKDKLKMEVDQLKKEVTLERMLVSKCCEEFRDYVEERSGEDPLVKGIPEDKNPFKE 66

>pdb|1TBG|E Chain E, Beta-Gamma Dimer Of The Heterotrimeric G-Protein Transducin Length = 68

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 21/56 (37%), Positives = 34/56 (60%)
Query: 77  DKDALKKQIENMKYQATMERWPLSKSIQAMREYVEENEKNDPLIHAPDKKNNPWAE 132
           +KD LK +++ +K + T+ER  +SK  +  R+YVEE    DPL+    +  NP+ E
Sbjct: 11  EKDKLKMEVDQLKKEVTLERMLVSKCCEEFRDYVEERSGEDPLVKGIPEDKNPFKE 66

>pdb|1A0R|G Chain G, Heterotrimeric Complex Of PhosducinTRANSDUCIN BETA-Gamma Length = 65

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 21/56 (37%), Positives = 34/56 (60%)
Query: 77  DKDALKKQIENMKYQATMERWPLSKSIQAMREYVEENEKNDPLIHAPDKKNNPWAE 132
           +KD LK +++ +K + T+ER  +SK  +  R+YVEE    DPL+    +  NP+ E
Sbjct: 10  EKDKLKMEVDQLKKEVTLERMLVSKCCEEFRDYVEERSGEDPLVKGIPEDKNPFKE 65

>pdb|1GOT|G Chain G, Heterotrimeric Complex Of A Gt-AlphaGI-Alpha Chimera And The Gt-Beta-Gamma Subunits Length = 73

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 21/56 (37%), Positives = 34/56 (60%)
Query: 77  DKDALKKQIENMKYQATMERWPLSKSIQAMREYVEENEKNDPLIHAPDKKNNPWAE 132
           +KD LK +++ +K + T+ER  +SK  +  R+YVEE    DPL+    +  NP+ E
Sbjct: 18  EKDKLKMEVDQLKKEVTLERMLVSKCCEEFRDYVEERSGEDPLVKGIPEDKNPFKE 73

>pdb|3AH8|G Chain G, Structure Of Heterotrimeric G Protein Galpha-Q Beta Gamma In Complex With An Inhibitor Ym-254890 Length = 78

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 23/71 (32%), Positives = 40/71 (56%), Gaps = 3/71 (4%)
Query: 66  GAMDPSVLAAMDKDAL---KKQIENMKYQATMERWPLSKSIQAMREYVEENEKNDPLIHA 122
           GAMDP  +A+ +  ++   +K +E +K +A ++R  +SK+   +  Y E + K DPL+  
Sbjct: 1   GAMDPEFMASNNTASIAQARKLVEQLKMEANIDRIKVSKAAADLMAYCEAHAKEDPLLTP 60
Query: 123 PDKKNNPWAEK 133
                NP+ EK
Sbjct: 61  VPASENPFREK 71

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	139
1gp2_G	71	G protein GI gamma 2; signal transduction protein,	7e-21
1got_G	73	GT-gamma; complex (GTP-binding/transducer), G prot	5e-17
1got_G	73	GT-gamma; complex (GTP-binding/transducer), G prot	3e-04

>1gp2_G G protein GI gamma 2; signal transduction protein, GTPase, WD40, RAS-like, complex (GTP-binding/transducer); HET: GDP; 2.30A {Bos taurus} SCOP: a.137.3.1 PDB: 1gg2_G* 2bcj_G* 3ah8_G* 1xhm_B 2qns_B 3kj5_B 3pvu_G* 3cik_G 3krw_G* 3krx_G* 3psc_G 1omw_G* 3pvw_G* 3sn6_G* Length = 71

 Score = 79.1 bits (195), Expect = 7e-21
 Identities = 18/69 (26%), Positives = 32/69 (46%)

Query: 71  SVLAAMDKDALKKQIENMKYQATMERWPLSKSIQAMREYVEENEKNDPLIHAPDKKNNPW 130
           +          +K +E +K +A ++R  +SK+   +  Y E + K DPL+       NP+
Sbjct: 2   ASNNTASIAQARKLVEQLKMEANIDRIKVSKAAADLMAYCEAHAKEDPLLTPVPASENPF 61

Query: 131 AEKGKCSIM 139
            EK   S +
Sbjct: 62  REKKFFSAI 70

>1got_G GT-gamma; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: a.137.3.1 PDB: 1tbg_E 2trc_G 1b9y_B 1b9x_B 1a0r_G* Length = 73

 Score = 69.6 bits (170), Expect = 5e-17
 Identities = 21/62 (33%), Positives = 36/62 (58%)

Query: 71  SVLAAMDKDALKKQIENMKYQATMERWPLSKSIQAMREYVEENEKNDPLIHAPDKKNNPW 130
           ++    +KD LK +++ +K + T+ER  +SK  +  R+YVEE    DPL+    +  NP+
Sbjct: 12  NIEDLTEKDKLKMEVDQLKKEVTLERMLVSKCCEEFRDYVEERSGEDPLVKGIPEDKNPF 71

Query: 131 AE 132
            E
Sbjct: 72  KE 73

>1got_G GT-gamma; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: a.137.3.1 PDB: 1tbg_E 2trc_G 1b9y_B 1b9x_B 1a0r_G* Length = 73

 Score = 36.4 bits (84), Expect = 3e-04
 Identities = 10/34 (29%), Positives = 21/34 (61%)

Query: 4  SVLAAMDKDALKKQIENMKYQATMERWPLSKSIQ 37
          ++    +KD LK +++ +K + T+ER  +SK  +
Sbjct: 12 NIEDLTEKDKLKMEVDQLKKEVTLERMLVSKCCE 45

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	139
3v5w_G	77	G gamma-I, guanine nucleotide-binding protein G(I)	99.94
1got_G	73	GT-gamma; complex (GTP-binding/transducer), G prot	99.88
2pbi_A	424	Regulator of G-protein signaling 9; helix WRAP, RG	99.7
3v5w_G	77	G gamma-I, guanine nucleotide-binding protein G(I)	99.19
1got_G	73	GT-gamma; complex (GTP-binding/transducer), G prot	98.98
2pbi_A	424	Regulator of G-protein signaling 9; helix WRAP, RG	97.47

>3v5w_G G gamma-I, guanine nucleotide-binding protein G(I)/G(S)/G(O) gamma-2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Bos taurus} PDB: 1xhm_B 3pvu_G* 3cik_G 3krw_G* 3krx_G* 3psc_G 1omw_G* 3pvw_G* 3uzs_G 1gp2_G* 1gg2_G* 2bcj_G* 3ah8_G* 2qns_B 3kj5_B 3sn6_G*

Probab=99.94  E-value=3.3e-27  Score=164.75  Aligned_cols=64  Identities=28%  Similarity=0.482  Sum_probs=56.0

Q ss_pred             cCHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHhhCCCCCCCCCCCCCCCCCCCCCC-cccC
Q psy10947         76 MDKDALKKQIENMKYQATMERWPLSKSIQAMREYVEENEKNDPLIHAPDKKNNPWAEKGK-CSIM  139 (139)
Q Consensus        76 ~~~~~lkk~VeqLr~el~~~RiKVS~aa~~Li~Yceq~~~~DPLL~g~~~~sNPf~ek~~-C~il  139 (139)
                      .++.++|+.|||||.|++++|||||+|++||++||++++.+||||+|++.++|||+||++ |+||
T Consensus        13 s~i~q~rk~VeQLr~Ea~i~RikVSqaaadL~~yc~~~~~~DpLl~Gvp~~~NPFkeKk~~c~lL   77 (77)
T 3v5w_G           13 ASIAQARKLVEQLKMEANIDRIKVSKAAADLMAYCEAHAKEDPLLTPVPASENPFREKKFFSAIL   77 (77)
T ss_dssp             -CHHHHHHHHHHHHHHHSSCCCCHHHHHHHHHHHHHHSGGGCTTTSCCCGGGCTTTTC-------
T ss_pred             hHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCCCCcCCCCCCCCCCCCCcCccccC
Confidence            469999999999999999999999999999999999999999999999999999999876 7775

>1got_G GT-gamma; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: a.137.3.1 PDB: 1tbg_E 2trc_G 1b9y_B 1b9x_B 1a0r_G*

Probab=99.88  E-value=5.8e-24  Score=146.84  Aligned_cols=56  Identities=38%  Similarity=0.677  Sum_probs=54.2

Q ss_pred             CHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHhhCCCCCCCCCCCCCCCCCCC
Q psy10947         77 DKDALKKQIENMKYQATMERWPLSKSIQAMREYVEENEKNDPLIHAPDKKNNPWAE  132 (139)
Q Consensus        77 ~~~~lkk~VeqLr~el~~~RiKVS~aa~~Li~Yceq~~~~DPLL~g~~~~sNPf~e  132 (139)
                      +++++|++|||||.||+++|+|||+||++|++||++|+++||||+|++.++|||+|
T Consensus        18 ~~~~lr~~veqLr~el~~~RikVS~aa~~L~~Yce~~~~~DpLl~g~~~~~NPf~e   73 (73)
T 1got_G           18 EKDKLKMEVDQLKKEVTLERMLVSKCCEEFRDYVEERSGEDPLVKGIPEDKNPFKE   73 (73)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHGGGCHHHHCCCGGGCTTCC
T ss_pred             cHHHHHHHHHHHHHHHCCchhhHHHHHHHHHHHHHhcCCCCCCcCCCCCCCCCCCC
Confidence            68999999999999999999999999999999999999999999999977899986

>2pbi_A Regulator of G-protein signaling 9; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}

Probab=99.70  E-value=1.8e-18  Score=150.33  Aligned_cols=105  Identities=18%  Similarity=0.203  Sum_probs=79.4

Q ss_pred             HhhhhhhccccchHhHHHHHhhc--cccccCC--Cccccc-chhhhhhhccCCCCChhhhhhcCHHHHHHHHHHHHHHhc
Q psy10947         19 ENMKYQATMERWPLSKSIQAYLV--PTFISHI--GTLNST-YGIFKCIHRSNGAMDPSVLAAMDKDALKKQIENMKYQAT   93 (139)
Q Consensus        19 eQLr~Ea~~~R~~VSka~~dl~~--~~~~~~p--G~vntt-~~i~k~~r~~~~~~~~~~m~~~~~~~lkk~VeqLr~el~   93 (139)
                      +|||.+  -+|-|.-+.+=|-.-  .-.+..|  |||||| +|+.|..-   |   . ...+.++++++++|||||.++.
T Consensus       166 ~q~~~~--k~r~k~~r~v~~~qe~a~w~vhrp~pg~~~~~e~~~~~~~~---~---~-~~~~~~~~~~r~~veqLk~~l~  236 (424)
T 2pbi_A          166 EQYRTG--KERNKADRYALDCQEKAYWLVHRSPPGMNNVLDYGLDRVTN---P---N-EVKKQTVTAVRKEIMYYQQALM  236 (424)
T ss_dssp             HHHHHH--TTSCHHHHHHHHHHHHHHHHHHSCCTTSCCTTCCCSCBSSC---T---T-CCCCCCHHHHHHHHHHHHHHHH
T ss_pred             HHHhhh--hccchhhhhhhhhhhhhhhhhhCCCCCCccccccccccccC---c---c-ccccccHHHHHHHHHHHHHHhc
Confidence            566643  445555555444442  2234444  999999 99887111   1   0 1223478999999999999999


Q ss_pred             cCcchhHHHHHHHHHHHHhhCCCCCCCCCCCCCCCCCCCC
Q psy10947         94 MERWPLSKSIQAMREYVEENEKNDPLIHAPDKKNNPWAEK  133 (139)
Q Consensus        94 ~~RiKVS~aa~~Li~Yceq~~~~DPLL~g~~~~sNPf~ek  133 (139)
                      ++|+|||+|+++|++||++|.++||||+|+.+ +|||++.
T Consensus       237 ~~rikvS~~~e~l~~y~e~~~~~DPll~g~~~-sNPw~~~  275 (424)
T 2pbi_A          237 RSTVKSSVSLGGIVKYSEQFSSNDAIMSGCLP-SNPWITD  275 (424)
T ss_dssp             SCCCCHHHHHHHHHHHHHHHGGGCHHHHCCSS-CCHHHHC
T ss_pred             ccceeHHHHHHHHHHHHHhhccCCCccccCCC-CCCCCCC
Confidence            99999999999999999999999999999976 7999965

>3v5w_G G gamma-I, guanine nucleotide-binding protein G(I)/G(S)/G(O) gamma-2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Bos taurus} PDB: 1xhm_B 3pvu_G* 3cik_G 3krw_G* 3krx_G* 3psc_G 1omw_G* 3pvw_G* 3uzs_G 1gp2_G* 1gg2_G* 2bcj_G* 3ah8_G* 2qns_B 3kj5_B 3sn6_G*

Probab=99.19  E-value=9.1e-12  Score=86.76  Aligned_cols=38  Identities=18%  Similarity=0.250  Sum_probs=33.1

Q ss_pred             cccCHHHHHHHHHhhhhhhccccchHhHHHHHhhcccc
Q psy10947          7 AAMDKDALKKQIENMKYQATMERWPLSKSIQAYLVPTF   44 (139)
Q Consensus         7 ~~~~~~~~r~~veQLr~Ea~~~R~~VSka~~dl~~~~~   44 (139)
                      .++++.|+|++|||||+||+++|+|||+|++||+....
T Consensus        11 ~ss~i~q~rk~VeQLr~Ea~i~RikVSqaaadL~~yc~   48 (77)
T 3v5w_G           11 NTASIAQARKLVEQLKMEANIDRIKVSKAAADLMAYCE   48 (77)
T ss_dssp             ---CHHHHHHHHHHHHHHHSSCCCCHHHHHHHHHHHHH
T ss_pred             chhHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHHH
Confidence            35689999999999999999999999999999998654

>1got_G GT-gamma; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: a.137.3.1 PDB: 1tbg_E 2trc_G 1b9y_B 1b9x_B 1a0r_G*

Probab=98.98  E-value=2.3e-10  Score=78.67  Aligned_cols=35  Identities=29%  Similarity=0.424  Sum_probs=33.2

Q ss_pred             cCHHHHHHHHHhhhhhhccccchHhHHHHHhhccc
Q psy10947          9 MDKDALKKQIENMKYQATMERWPLSKSIQAYLVPT   43 (139)
Q Consensus         9 ~~~~~~r~~veQLr~Ea~~~R~~VSka~~dl~~~~   43 (139)
                      ++++++|++|||||.|++++|+|||+||++|+...
T Consensus        17 ~~~~~lr~~veqLr~el~~~RikVS~aa~~L~~Yc   51 (73)
T 1got_G           17 TEKDKLKMEVDQLKKEVTLERMLVSKCCEEFRDYV   51 (73)
T ss_dssp             THHHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHHHHHHCCchhhHHHHHHHHHHHH
Confidence            49999999999999999999999999999999865

>2pbi_A Regulator of G-protein signaling 9; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}

Probab=97.47  E-value=5.8e-05  Score=65.55  Aligned_cols=35  Identities=14%  Similarity=0.032  Sum_probs=32.2

Q ss_pred             cCHHHHHHHHHhhhhhhccccchHhHHHHHhhccc
Q psy10947          9 MDKDALKKQIENMKYQATMERWPLSKSIQAYLVPT   43 (139)
Q Consensus         9 ~~~~~~r~~veQLr~Ea~~~R~~VSka~~dl~~~~   43 (139)
                      -+++++|++|||||.|++.+|+|||+|+++|+...
T Consensus       219 ~~~~~~r~~veqLk~~l~~~rikvS~~~e~l~~y~  253 (424)
T 2pbi_A          219 QTVTAVRKEIMYYQQALMRSTVKSSVSLGGIVKYS  253 (424)
T ss_dssp             CCHHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHHHHHhcccceeHHHHHHHHHHHH
Confidence            38999999999999999999999999999997653

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	139
d1tbge_	68	a.137.3.1 (E:) Transducin (heterotrimeric G protei	3e-18
d1tbge_	68	a.137.3.1 (E:) Transducin (heterotrimeric G protei	2e-04
d1gg2g_	54	a.137.3.1 (G:) Transducin (heterotrimeric G protei	7e-14

>d1tbge_ a.137.3.1 (E:) Transducin (heterotrimeric G protein), gamma chain {Cow (Bos taurus) [TaxId: 9913]} Length = 68

class: All alpha proteins
fold: Non-globular all-alpha subunits of globular proteins
superfamily: Transducin (heterotrimeric G protein), gamma chain
family: Transducin (heterotrimeric G protein), gamma chain
domain: Transducin (heterotrimeric G protein), gamma chain
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 71.3 bits (175), Expect = 3e-18
 Identities = 21/58 (36%), Positives = 34/58 (58%)

Query: 76  MDKDALKKQIENMKYQATMERWPLSKSIQAMREYVEENEKNDPLIHAPDKKNNPWAEK 133
            +KD LK +++ +K + T+ER  +SK  +  R+YVEE    DPL+    +  NP+ E 
Sbjct: 10  TEKDKLKMEVDQLKKEVTLERMLVSKCCEEFRDYVEERSGEDPLVKGIPEDKNPFKEL 67

>d1tbge_ a.137.3.1 (E:) Transducin (heterotrimeric G protein), gamma chain {Cow (Bos taurus) [TaxId: 9913]} Length = 68

class: All alpha proteins
fold: Non-globular all-alpha subunits of globular proteins
superfamily: Transducin (heterotrimeric G protein), gamma chain
family: Transducin (heterotrimeric G protein), gamma chain
domain: Transducin (heterotrimeric G protein), gamma chain
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 35.1 bits (81), Expect = 2e-04
 Identities = 10/29 (34%), Positives = 19/29 (65%)

Query: 9  MDKDALKKQIENMKYQATMERWPLSKSIQ 37
           +KD LK +++ +K + T+ER  +SK  +
Sbjct: 10 TEKDKLKMEVDQLKKEVTLERMLVSKCCE 38

>d1gg2g_ a.137.3.1 (G:) Transducin (heterotrimeric G protein), gamma chain {Cow (Bos taurus) [TaxId: 9913]} Length = 54

class: All alpha proteins
fold: Non-globular all-alpha subunits of globular proteins
superfamily: Transducin (heterotrimeric G protein), gamma chain
family: Transducin (heterotrimeric G protein), gamma chain
domain: Transducin (heterotrimeric G protein), gamma chain
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 59.7 bits (145), Expect = 7e-14
 Identities = 15/52 (28%), Positives = 27/52 (51%)

Query: 79  DALKKQIENMKYQATMERWPLSKSIQAMREYVEENEKNDPLIHAPDKKNNPW 130
              +K +E +K +A ++R  +SK+   +  Y E + K DPL+       NP+
Sbjct: 3   AQARKLVEQLKMEANIDRIKVSKAAADLMAYCEAHAKEDPLLTPVPASENPF 54

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	139
d1gg2g_	54	Transducin (heterotrimeric G protein), gamma chain	99.91
d1tbge_	68	Transducin (heterotrimeric G protein), gamma chain	99.9
d1tbge_	68	Transducin (heterotrimeric G protein), gamma chain	99.16
d1gg2g_	54	Transducin (heterotrimeric G protein), gamma chain	99.12

>d1gg2g_ a.137.3.1 (G:) Transducin (heterotrimeric G protein), gamma chain {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: Non-globular all-alpha subunits of globular proteins
superfamily: Transducin (heterotrimeric G protein), gamma chain
family: Transducin (heterotrimeric G protein), gamma chain
domain: Transducin (heterotrimeric G protein), gamma chain
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.91  E-value=5.1e-25  Score=142.94  Aligned_cols=54  Identities=28%  Similarity=0.515  Sum_probs=52.4

Q ss_pred             CHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHhhCCCCCCCCCCCCCCCCC
Q psy10947         77 DKDALKKQIENMKYQATMERWPLSKSIQAMREYVEENEKNDPLIHAPDKKNNPW  130 (139)
Q Consensus        77 ~~~~lkk~VeqLr~el~~~RiKVS~aa~~Li~Yceq~~~~DPLL~g~~~~sNPf  130 (139)
                      +++++|++|||||.|++++|+|||+||++|++||++|+++||||+|+++++|||
T Consensus         1 ~i~q~rk~VeqLr~e~~~~RikvS~aa~~l~~y~e~~~~~Dpll~g~~~~~NPf   54 (54)
T d1gg2g_           1 SIAQARKLVEQLKMEANIDRIKVSKAAADLMAYCEAHAKEDPLLTPVPASENPF   54 (54)
T ss_dssp             CHHHHHHHHHHHHHHHSSCCCCHHHHHHHHHHHHHHHGGGCTTTSCCCTTTSCC
T ss_pred             CHHHHHHHHHHHHHHhCCchhhHHHHHHHHHHHHHhcCcCCCCcCCCCCCCCCC
Confidence            478999999999999999999999999999999999999999999999988999

>d1tbge_ a.137.3.1 (E:) Transducin (heterotrimeric G protein), gamma chain {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: Non-globular all-alpha subunits of globular proteins
superfamily: Transducin (heterotrimeric G protein), gamma chain
family: Transducin (heterotrimeric G protein), gamma chain
domain: Transducin (heterotrimeric G protein), gamma chain
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.90  E-value=5.5e-25  Score=148.80  Aligned_cols=58  Identities=36%  Similarity=0.636  Sum_probs=56.3

Q ss_pred             CHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHhhCCCCCCCCCCCCCCCCCCCCC
Q psy10947         77 DKDALKKQIENMKYQATMERWPLSKSIQAMREYVEENEKNDPLIHAPDKKNNPWAEKG  134 (139)
Q Consensus        77 ~~~~lkk~VeqLr~el~~~RiKVS~aa~~Li~Yceq~~~~DPLL~g~~~~sNPf~ek~  134 (139)
                      +++++|++|||||.|++++|++||+||++|++||++|+.+||||+|++++.|||+||+
T Consensus        11 d~~~lk~~VeQLr~Ea~i~R~~VS~aa~dl~~yce~~~~~DpLl~g~p~~~NPfkEKk   68 (68)
T d1tbge_          11 EKDKLKMEVDQLKKEVTLERMLVSKCCEEFRDYVEERSGEDPLVKGIPEDKNPFKELK   68 (68)
T ss_dssp             TTHHHHHHHHHHHHHHTCCCCCHHHHHHHHHHHHHTTTTSCHHHHCCCGGGCTTCCCC
T ss_pred             hHHHHHHHHHHHHHHhcCchhhHHHHHHHHHHHHHhcCCCCCcccCCCCCCCCCCCCC
Confidence            5899999999999999999999999999999999999999999999999999999985

>d1tbge_ a.137.3.1 (E:) Transducin (heterotrimeric G protein), gamma chain {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: Non-globular all-alpha subunits of globular proteins
superfamily: Transducin (heterotrimeric G protein), gamma chain
family: Transducin (heterotrimeric G protein), gamma chain
domain: Transducin (heterotrimeric G protein), gamma chain
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.16  E-value=6e-12  Score=84.21  Aligned_cols=38  Identities=26%  Similarity=0.322  Sum_probs=35.2

Q ss_pred             ccCHHHHHHHHHhhhhhhccccchHhHHHHHhhccccc
Q psy10947          8 AMDKDALKKQIENMKYQATMERWPLSKSIQAYLVPTFI   45 (139)
Q Consensus         8 ~~~~~~~r~~veQLr~Ea~~~R~~VSka~~dl~~~~~~   45 (139)
                      .++++++|++|||||+||+++|++||+||+||+....-
T Consensus         9 msd~~~lk~~VeQLr~Ea~i~R~~VS~aa~dl~~yce~   46 (68)
T d1tbge_           9 LTEKDKLKMEVDQLKKEVTLERMLVSKCCEEFRDYVEE   46 (68)
T ss_dssp             CCTTHHHHHHHHHHHHHHTCCCCCHHHHHHHHHHHHHT
T ss_pred             cchHHHHHHHHHHHHHHhcCchhhHHHHHHHHHHHHHh
Confidence            57999999999999999999999999999999987653

>d1gg2g_ a.137.3.1 (G:) Transducin (heterotrimeric G protein), gamma chain {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: Non-globular all-alpha subunits of globular proteins
superfamily: Transducin (heterotrimeric G protein), gamma chain
family: Transducin (heterotrimeric G protein), gamma chain
domain: Transducin (heterotrimeric G protein), gamma chain
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.12  E-value=1.4e-11  Score=78.93  Aligned_cols=34  Identities=21%  Similarity=0.321  Sum_probs=32.1

Q ss_pred             CHHHHHHHHHhhhhhhccccchHhHHHHHhhccc
Q psy10947         10 DKDALKKQIENMKYQATMERWPLSKSIQAYLVPT   43 (139)
Q Consensus        10 ~~~~~r~~veQLr~Ea~~~R~~VSka~~dl~~~~   43 (139)
                      +++|+|++|||||+|++++|+|||+||+||+...
T Consensus         1 ~i~q~rk~VeqLr~e~~~~RikvS~aa~~l~~y~   34 (54)
T d1gg2g_           1 SIAQARKLVEQLKMEANIDRIKVSKAAADLMAYC   34 (54)
T ss_dssp             CHHHHHHHHHHHHHHHSSCCCCHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHhCCchhhHHHHHHHHHHHH
Confidence            5899999999999999999999999999999864