Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database
ID Alignment Graph Length
Definition
E-value Query 112
cd02174 150
cd02174, CCT, CTP:phosphocholine cytidylyltransfer
5e-55 PTZ00308 353
PTZ00308, PTZ00308, ethanolamine-phosphate cytidyl
2e-45 COG0615 140
COG0615, TagD, Cytidylyltransferase [Cell envelope
5e-35 cd02170 136
cd02170, cytidylyltransferase, cytidylyltransferas
2e-28 PLN02406 418
PLN02406, PLN02406, ethanolamine-phosphate cytidyl
2e-28 PLN02413 294
PLN02413, PLN02413, choline-phosphate cytidylyltra
2e-25 cd02173 152
cd02173, ECT, CTP:phosphoethanolamine cytidylyltra
4e-23 PTZ00308 353
PTZ00308, PTZ00308, ethanolamine-phosphate cytidyl
9e-21 TIGR00125 66
TIGR00125, cyt_tran_rel, cytidyltransferase-like d
6e-20 pfam01467 148
pfam01467, CTP_transf_2, Cytidylyltransferase
2e-15 PLN02406 418
PLN02406, PLN02406, ethanolamine-phosphate cytidyl
4e-15 cd02171 129
cd02171, G3P_Cytidylyltransferase, glycerol-3-phos
9e-13 TIGR02199 144
TIGR02199, rfaE_dom_II, rfaE bifunctional protein,
6e-12 TIGR01518 125
TIGR01518, g3p_cytidyltrns, glycerol-3-phosphate c
1e-11 cd02172 144
cd02172, RfaE_N, N-terminal domain of RfaE
1e-11 COG2870 467
COG2870, RfaE, ADP-heptose synthase, bifunctional
9e-11 PRK11316 473
PRK11316, PRK11316, bifunctional heptose 7-phospha
2e-07 PRK00777 153
PRK00777, PRK00777, phosphopantetheine adenylyltra
1e-05 PRK01170 322
PRK01170, PRK01170, phosphopantetheine adenylyltra
4e-04 COG1019 158
COG1019, COG1019, Predicted nucleotidyltransferase
5e-04
>gnl|CDD|173925 cd02174, CCT, CTP:phosphocholine cytidylyltransferase
Back Hide alignment and domain information
Score = 167 bits (426), Expect = 5e-55
Identities = 59/85 (69%), Positives = 69/85 (81%), Gaps = 2/85 (2%)
Query: 15 YDMVHFGHANNLRQAKELGN--YLVVGVHTDEEISKHKGPPVFTQQERYKMVRGIKWVDE 72
+D+ H+GHAN LRQAK+LG YL+VGVH+DEEI KHKGPPV T++ERY+ VR KWVDE
Sbjct: 11 FDLFHYGHANALRQAKKLGPNDYLIVGVHSDEEIHKHKGPPVMTEEERYEAVRHCKWVDE 70
Query: 73 VVEGAPYVTTLETLDAYDCDFCVHG 97
VVEGAPYVTT E LD Y CD+ HG
Sbjct: 71 VVEGAPYVTTPEFLDKYKCDYVAHG 95
CTP:phosphocholine cytidylyltransferase (CCT) catalyzes the condensation of CTP and phosphocholine to form CDP-choline as the rate-limiting and regulatory step in the CDP-choline pathway. CCT is unique in that its enzymatic activity is regulated by the extent of its association with membrane structures. A current model posts that the elastic stress of the bilayer curvature is sensed by CCT and this governs the degree of membrane association, thus providing a mechanism for both positive and negative regulation of activity. Length = 150
>gnl|CDD|140329 PTZ00308, PTZ00308, ethanolamine-phosphate cytidylyltransferase; Provisional
Back Show alignment and domain information
Score = 149 bits (378), Expect = 2e-45
Identities = 53/83 (63%), Positives = 65/83 (78%)
Query: 15 YDMVHFGHANNLRQAKELGNYLVVGVHTDEEISKHKGPPVFTQQERYKMVRGIKWVDEVV 74
+DM+HFGHAN LRQA+ LG+ L VG H+DEEI ++KGPPV Q+ERY+ +R KWVDEVV
Sbjct: 20 FDMLHFGHANALRQARALGDELFVGCHSDEEIMRNKGPPVMHQEERYEALRACKWVDEVV 79
Query: 75 EGAPYVTTLETLDAYDCDFCVHG 97
EG PY T LE L+ +CDF VHG
Sbjct: 80 EGYPYTTRLEDLERLECDFVVHG 102
>gnl|CDD|223688 COG0615, TagD, Cytidylyltransferase [Cell envelope biogenesis, outer membrane / Lipid metabolism]
Back Show alignment and domain information
Score = 117 bits (294), Expect = 5e-35
Identities = 30/84 (35%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Query: 15 YDMVHFGHANNLRQAKELGNYL-VVGVHTDEEISKHKGPPVFTQQERYKMVRGIKWVDEV 73
+D++H GH LRQAK+LG+ L VV + I + K P+ +++R +++ +++VDEV
Sbjct: 10 FDILHPGHIEFLRQAKKLGDELIVVVARDETVIKRKKRKPIMPEEQRAEVLESLRYVDEV 69
Query: 74 VEGAPYVTTLETLDAYDCDFCVHG 97
+ GAP+ E ++ Y D V G
Sbjct: 70 ILGAPWDIKFEDIEEYKPDIVVLG 93
>gnl|CDD|173921 cd02170, cytidylyltransferase, cytidylyltransferase
Back Show alignment and domain information
Score = 99.7 bits (249), Expect = 2e-28
Identities = 31/83 (37%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Query: 15 YDMVHFGHANNLRQAKELGNYLVVGVHTDEEISKHKGPPVFTQQERYKMVRGIKWVDEVV 74
+D++H GH L +AK+LG+YL+VGV DE ++K K P+ +++R ++V +K+VDEV+
Sbjct: 10 FDIIHPGHIRFLEEAKKLGDYLIVGVARDETVAKIKRRPILPEEQRAEVVEALKYVDEVI 69
Query: 75 EGAPYVTTLETLDAYDCDFCVHG 97
G P+ + D V G
Sbjct: 70 LGHPWSYFKPLEELKP-DVIVLG 91
The cytidylyltransferase family includes cholinephosphate cytidylyltransferase (CCT), glycerol-3-phosphate cytidylyltransferase, RafE and phosphoethanolamine cytidylyltransferase (ECT). All enzymes catalyze the transfer of a cytidylyl group from CTP to various substrates. Length = 136
>gnl|CDD|215227 PLN02406, PLN02406, ethanolamine-phosphate cytidylyltransferase
Back Show alignment and domain information
Score = 105 bits (264), Expect = 2e-28
Identities = 47/87 (54%), Positives = 61/87 (70%), Gaps = 4/87 (4%)
Query: 15 YDMVHFGHANNLRQAKELGNYLVVGVHTDEEISKHKGPPVFTQQERYKMVRGIKWVDEVV 74
+DM+H+GHAN LRQA+ LG+ LVVGV +DEEI +KGPPV ER MV G+KWVDEV+
Sbjct: 62 FDMMHYGHANALRQARALGDELVVGVVSDEEIIANKGPPVTPMHERMIMVSGVKWVDEVI 121
Query: 75 EGAPYVTTLETL----DAYDCDFCVHG 97
APY T E + + Y+ D+ +HG
Sbjct: 122 PDAPYAITEEFMNKLFNEYNIDYIIHG 148
>gnl|CDD|215229 PLN02413, PLN02413, choline-phosphate cytidylyltransferase
Back Show alignment and domain information
Score = 96.2 bits (239), Expect = 2e-25
Identities = 44/87 (50%), Positives = 56/87 (64%), Gaps = 2/87 (2%)
Query: 15 YDMVHFGHANNLRQAKEL--GNYLVVGVHTDEEISKHKGPPVFTQQERYKMVRGIKWVDE 72
YD+ HFGHA +L QAK+L YL+VG DE K+KG V T+ ERY+ +R KWVDE
Sbjct: 36 YDLFHFGHARSLEQAKKLFPNTYLLVGCCNDELTHKYKGKTVMTEDERYESLRHCKWVDE 95
Query: 73 VVEGAPYVTTLETLDAYDCDFCVHGAL 99
V+ AP+V T E LD + D+ H AL
Sbjct: 96 VIPDAPWVITQEFLDKHRIDYVAHDAL 122
>gnl|CDD|173924 cd02173, ECT, CTP:phosphoethanolamine cytidylyltransferase (ECT)
Back Show alignment and domain information
Score = 86.9 bits (216), Expect = 4e-23
Identities = 39/90 (43%), Positives = 56/90 (62%), Gaps = 2/90 (2%)
Query: 15 YDMVHFGHANNLRQAKELGNYLVVGVHTDEEISKHKGP--PVFTQQERYKMVRGIKWVDE 72
+D+ H GH L +A+ELG+YL+VGVH D+ ++++KG P+ ER V ++VDE
Sbjct: 11 FDLFHIGHIEFLEKARELGDYLIVGVHDDQTVNEYKGSNYPIMNLHERVLSVLACRYVDE 70
Query: 73 VVEGAPYVTTLETLDAYDCDFCVHGALEVL 102
VV GAPYV T E ++ + D VHG E
Sbjct: 71 VVIGAPYVITKELIEHFKIDVVVHGKTEET 100
CTP:phosphoethanolamine cytidylyltransferase (ECT) catalyzes the conversion of phosphoethanolamine to CDP-ethanolamine as part of the CDP-ethanolamine biosynthesis pathway. ECT expression in hepatocytes is localized predominantly to areas of the cytoplasm that are rich in rough endoplasmic reticulum. Several ECTs, including yeast and human ECT, have large repetitive sequences located within their N- and C-termini. Length = 152
>gnl|CDD|140329 PTZ00308, PTZ00308, ethanolamine-phosphate cytidylyltransferase; Provisional
Back Show alignment and domain information
Score = 84.5 bits (209), Expect = 9e-21
Identities = 38/99 (38%), Positives = 57/99 (57%), Gaps = 2/99 (2%)
Query: 15 YDMVHFGHANNLRQAKELGNYLVVGVHTDEEISKHKGP--PVFTQQERYKMVRGIKWVDE 72
+D+ H GH L++A+ELG+YL+VGVH D+ +++ KG P+ ER V ++VDE
Sbjct: 201 FDLFHIGHIRVLQKARELGDYLIVGVHEDQVVNEQKGSNYPIMNLNERVLGVLSCRYVDE 260
Query: 73 VVEGAPYVTTLETLDAYDCDFCVHGALEVLVSLESSVSA 111
VV GAP+ T E +D+ + V G LV+ E
Sbjct: 261 VVIGAPFDVTKEVIDSLHINVVVGGKFSDLVNEEGGSDP 299
>gnl|CDD|232837 TIGR00125, cyt_tran_rel, cytidyltransferase-like domain
Back Show alignment and domain information
Score = 76.2 bits (188), Expect = 6e-20
Identities = 26/60 (43%), Positives = 42/60 (70%)
Query: 14 NYDMVHFGHANNLRQAKELGNYLVVGVHTDEEISKHKGPPVFTQQERYKMVRGIKWVDEV 73
+D H GH + L +AKEL + L+VGV +D+ ++ KG PVF+ +ER +M++ +K+VDE
Sbjct: 7 TFDPFHLGHLDLLERAKELFDELIVGVGSDQFVNPLKGEPVFSLEERLEMLKALKYVDEN 66
Protein families that contain at least one copy of this domain include citrate lyase ligase, pantoate-beta-alanine ligase, glycerol-3-phosphate cytidyltransferase, ADP-heptose synthase, phosphocholine cytidylyltransferase, lipopolysaccharide core biosynthesis protein KdtB, the bifunctional protein NadR, and a number whose function is unknown. Many of these proteins are known to use CTP or ATP and release pyrophosphate. Length = 66
>gnl|CDD|216517 pfam01467, CTP_transf_2, Cytidylyltransferase
Back Show alignment and domain information
Score = 67.1 bits (164), Expect = 2e-15
Identities = 28/110 (25%), Positives = 41/110 (37%), Gaps = 22/110 (20%)
Query: 14 NYDMVHFGHANNLRQAKELGNYL-VVGVHTDEEISKHKGPPVFTQQERYKMVRGIKWVDE 72
+D +H GH L QAKEL + +VGV +DE K +F+ +ER +M+ VD
Sbjct: 5 TFDPIHLGHLRLLEQAKELFDLDKIVGVPSDESPHK-DTKNLFSAEERLEMLELALEVDP 63
Query: 73 -------------VVEGAPYVTTL-------ETLDAYDCDFCVHGALEVL 102
+ GA + L E L + L
Sbjct: 64 NLEVDDFEDLDVYFIIGADALVNLRGWRGVTELLPEFQIVVVNRPLDYGL 113
This family includes: Cholinephosphate cytidylyltransferase. Glycerol-3-phosphate cytidylyltransferase. Length = 148
>gnl|CDD|215227 PLN02406, PLN02406, ethanolamine-phosphate cytidylyltransferase
Back Show alignment and domain information
Score = 69.3 bits (169), Expect = 4e-15
Identities = 32/85 (37%), Positives = 52/85 (61%), Gaps = 2/85 (2%)
Query: 15 YDMVHFGHANNLRQAKELGNYLVVGVHTDEEISKHKGP--PVFTQQERYKMVRGIKWVDE 72
+D+ H GH LR A+ LG++L+VG+HTD+ +S H+G P+ ER V ++VDE
Sbjct: 260 FDLFHAGHVEILRLARALGDFLLVGIHTDQTVSAHRGAHRPIMNLHERSLSVLACRYVDE 319
Query: 73 VVEGAPYVTTLETLDAYDCDFCVHG 97
V+ GAP+ + + + ++ VHG
Sbjct: 320 VIIGAPWEVSKDMITTFNISLVVHG 344
>gnl|CDD|173922 cd02171, G3P_Cytidylyltransferase, glycerol-3-phosphate cytidylyltransferase
Back Show alignment and domain information
Score = 59.8 bits (145), Expect = 9e-13
Identities = 27/83 (32%), Positives = 46/83 (55%)
Query: 15 YDMVHFGHANNLRQAKELGNYLVVGVHTDEEISKHKGPPVFTQQERYKMVRGIKWVDEVV 74
+D++H GH N L +AK LG+ L+V V TDE + V ++R +++ I++VD V+
Sbjct: 10 FDLLHIGHLNLLERAKALGDKLIVAVSTDEFNAGKGKKAVIPYEQRAEILESIRYVDLVI 69
Query: 75 EGAPYVTTLETLDAYDCDFCVHG 97
+ +E + Y+ D V G
Sbjct: 70 PETNWEQKIEDIKKYNVDVFVMG 92
Glycerol-3-phosphate cytidylyltransferase,(CDP-glycerol pyrophosphorylase). Glycerol-3-phosphate cytidyltransferase acts in pathways of teichoic acid biosynthesis. Teichoic acids are substituted polymers, linked by phosphodiester bonds, of glycerol, ribitol, etc. An example is poly(glycerol phosphate), the major teichoic acid of the Bacillus subtilis cell wall. Most, but not all, species encoding proteins in this family are Gram-positive bacteria. A closely related protein assigned a different function experimentally is a human ethanolamine-phosphate cytidylyltransferase. Length = 129
>gnl|CDD|131254 TIGR02199, rfaE_dom_II, rfaE bifunctional protein, domain II
Back Show alignment and domain information
Score = 57.7 bits (140), Expect = 6e-12
Identities = 23/62 (37%), Positives = 42/62 (67%), Gaps = 2/62 (3%)
Query: 15 YDMVHFGHANNLRQAKELGNYLVVGVHTDEEISKHKGP--PVFTQQERYKMVRGIKWVDE 72
+D++H GH + L+QA+ LG+ LVVGV++D + + KG P+ +++R +++ + VD
Sbjct: 20 FDILHAGHVSYLQQARALGDRLVVGVNSDASVKRLKGETRPINPEEDRAEVLAALSSVDY 79
Query: 73 VV 74
VV
Sbjct: 80 VV 81
RfaE is a protein involved in the biosynthesis of ADP-L-glycero-D-manno-heptose, a precursor for LPS inner core biosynthesis. RfaE is a bifunctional protein in E. coli, and separate proteins in some other genome. Domain I (TIGR02198) is suggested to act in D-glycero-D-manno-heptose 1-phosphate biosynthesis, while domain II (this family) adds ADP to yield ADP-D-glycero-D-manno-heptose [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 144
>gnl|CDD|130581 TIGR01518, g3p_cytidyltrns, glycerol-3-phosphate cytidylyltransferase
Back Show alignment and domain information
Score = 56.8 bits (137), Expect = 1e-11
Identities = 24/83 (28%), Positives = 47/83 (56%)
Query: 15 YDMVHFGHANNLRQAKELGNYLVVGVHTDEEISKHKGPPVFTQQERYKMVRGIKWVDEVV 74
+D++H+GH N L +AK+LG+YL+V + TDE + + + + R ++ I++VD V+
Sbjct: 7 FDLLHWGHINLLERAKQLGDYLIVALSTDEFNLQKQKKAYHSYEHRKLILETIRYVDLVI 66
Query: 75 EGAPYVTTLETLDAYDCDFCVHG 97
+ + + ++ D V G
Sbjct: 67 PEKSWEQKKQDIIDFNIDVFVMG 89
This model describes glycerol-3-phosphate cytidyltransferase, also called CDP-glycerol pyrophosphorylase. A closely related protein assigned a different function experimentally is a human ethanolamine-phosphate cytidylyltransferase (EC 2.7.7.14). Glycerol-3-phosphate cytidyltransferase acts in pathways of teichoic acid biosynthesis. Teichoic acids are substituted polymers, linked by phosphodiester bonds, of glycerol, ribitol, etc. An example is poly(glycerol phosphate), the major teichoic acid of the Bacillus subtilis cell wall. Most but not all species encoding proteins in this family are Gram-positive bacteria [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan]. Length = 125
>gnl|CDD|173923 cd02172, RfaE_N, N-terminal domain of RfaE
Back Show alignment and domain information
Score = 57.0 bits (138), Expect = 1e-11
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 15 YDMVHFGHANNLRQAKELGNYLVVGVHTDEEISKHKGPPVFTQQERYKMVRGIKWVDEVV 74
+D++H GH +L+ A+ LG+ LVV + +D ++K G P+F + R +++ + +VD VV
Sbjct: 13 FDLLHPGHVRHLQAARSLGDILVVSLTSDRYVNKGPGRPIFPEDLRAEVLAALGFVDYVV 72
Query: 75 EGAPYVTTLETLDAYDCDFCVHG 97
T LE +DA + V G
Sbjct: 73 L-FDNPTALEIIDALQPNIYVKG 94
RfaE is a protein involved in the biosynthesis of ADP-L-glycero-D-manno-heptose, a precursor for LPS inner core biosynthesis. RfaE is a bifunctional protein in Escherichia coli, and separate proteins in other organisms. Domain I is suggested to act in D-glycero-D-manno-heptose 1-phosphate biosynthesis, while domain II (this family) adds ADP to yield ADP-D-glycero-D-manno-heptose . Length = 144
>gnl|CDD|225425 COG2870, RfaE, ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell envelope biogenesis, outer membrane]
Back Show alignment and domain information
Score = 56.9 bits (138), Expect = 9e-11
Identities = 22/62 (35%), Positives = 41/62 (66%), Gaps = 2/62 (3%)
Query: 15 YDMVHFGHANNLRQAKELGNYLVVGVHTDEEISKHKGP--PVFTQQERYKMVRGIKWVDE 72
+D++H GH L QA+ LG+ L+VGV++D + + KG P+ ++++R ++ ++ VD
Sbjct: 341 FDILHAGHVTYLAQARALGDRLIVGVNSDASVKRLKGESRPINSEEDRAAVLAALESVDL 400
Query: 73 VV 74
VV
Sbjct: 401 VV 402
>gnl|CDD|183085 PRK11316, PRK11316, bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase; Provisional
Back Show alignment and domain information
Score = 47.1 bits (113), Expect = 2e-07
Identities = 21/62 (33%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Query: 15 YDMVHFGHANNLRQAKELGNYLVVGVHTDEEISKHKGP--PVFTQQERYKMVRGIKWVDE 72
+D++H GH + L A++LG+ L+V V++D + + KG PV ++R ++ ++ VD
Sbjct: 349 FDILHAGHVSYLANARKLGDRLIVAVNSDASVKRLKGEGRPVNPLEQRMAVLAALEAVDW 408
Query: 73 VV 74
VV
Sbjct: 409 VV 410
>gnl|CDD|234834 PRK00777, PRK00777, phosphopantetheine adenylyltransferase; Provisional
Back Show alignment and domain information
Score = 41.4 bits (98), Expect = 1e-05
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Query: 15 YDMVHFGHANNLRQAKELGNYLVVGVHTDEEISKHKGPPVFTQQERYKMVRGIKWVDEVV 74
+D +H GH LR+A ELG + +G+ +DE +K V + R K ++ K++ V
Sbjct: 10 FDPLHDGHRALLRKAFELGKRVTIGLTSDEFAKSYKKHKVRPYEVRLKNLK--KFLKAVE 67
Query: 75 EGAPY-VTTLETLDAY 89
Y + ++ D Y
Sbjct: 68 YDREYEIVKID--DPY 81
>gnl|CDD|234912 PRK01170, PRK01170, phosphopantetheine adenylyltransferase/unknown domain fusion protein; Provisional
Back Show alignment and domain information
Score = 37.9 bits (88), Expect = 4e-04
Identities = 15/50 (30%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 15 YDMVHFGHANNLRQAKELGNYLVVGVHTDEEISKHKGPPVFTQQERYKMV 64
+ +H GH L++A E G+ +V+G+ +DE + K+K P+ ++R + +
Sbjct: 9 FSKLHKGHKALLKKAIETGDEVVIGLTSDEYVRKNKVYPI-PYEDRKRKL 57
>gnl|CDD|223950 COG1019, COG1019, Predicted nucleotidyltransferase [General function prediction only]
Back Show alignment and domain information
Score = 36.9 bits (86), Expect = 5e-04
Identities = 17/75 (22%), Positives = 36/75 (48%), Gaps = 4/75 (5%)
Query: 15 YDMVHFGHANNLRQAKELGNYLVVGVHTDEEISKHKGPPVFTQQERYKMVRGIKWVDEVV 74
+D +H GH L A E+G+ + +G+ +DE K K + + R + +R +++ +
Sbjct: 14 FDRLHDGHKKLLEVAFEIGDRVTIGLTSDELAKKKKKEKIEPYEVRLRNLR--NFLESIK 71
Query: 75 EGAPYVTTLETLDAY 89
+ ++ D Y
Sbjct: 72 ADYEEIVPID--DPY 84
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
ID Alignment Graph Length
Definition
Probability Query
112
cd02172 144
RfaE_N N-terminal domain of RfaE. RfaE is a protei
99.96 TIGR02199 144
rfaE_dom_II rfaE bifunctional protein, domain II.
99.96 cd02174 150
CCT CTP:phosphocholine cytidylyltransferase. CTP:p
99.94 cd02173 152
ECT CTP:phosphoethanolamine cytidylyltransferase (
99.94 PTZ00308 353
ethanolamine-phosphate cytidylyltransferase; Provi
99.93 cd02170 136
cytidylyltransferase cytidylyltransferase. The cyt
99.93 TIGR01518 125
g3p_cytidyltrns glycerol-3-phosphate cytidylyltran
99.93 COG0615 140
TagD Cytidylyltransferase [Cell envelope biogenesi
99.93 cd02171 129
G3P_Cytidylyltransferase glycerol-3-phosphate cyti
99.93 PF06574 157
FAD_syn: FAD synthetase; InterPro: IPR015864 Ribof
99.92 PTZ00308 353
ethanolamine-phosphate cytidylyltransferase; Provi
99.91 PLN02406 418
ethanolamine-phosphate cytidylyltransferase
99.9 PLN02413 294
choline-phosphate cytidylyltransferase
99.9 PRK07143 279
hypothetical protein; Provisional
99.9 cd02064 180
FAD_synthetase_N FAD synthetase, N-terminal domain
99.9 PLN02406 418
ethanolamine-phosphate cytidylyltransferase
99.89 KOG2803|consensus 358
99.89 PRK05627 305
bifunctional riboflavin kinase/FMN adenylyltransfe
99.88 TIGR00083 288
ribF riboflavin kinase/FMN adenylyltransferase. mu
99.87 COG0196 304
RibF FAD synthase [Coenzyme metabolism]
99.86 PRK11316 473
bifunctional heptose 7-phosphate kinase/heptose 1-
99.86 COG2870 467
RfaE ADP-heptose synthase, bifunctional sugar kina
99.82 KOG2803|consensus 358
99.81 KOG2804|consensus 348
99.78 cd02039 143
cytidylyltransferase_like Cytidylyltransferase-lik
99.76 PRK00168 159
coaD phosphopantetheine adenylyltransferase; Provi
99.7 TIGR00125 66
cyt_tran_rel cytidyltransferase-related domain. Pr
99.69 COG0669 159
CoaD Phosphopantetheine adenylyltransferase [Coenz
99.69 PRK00777 153
phosphopantetheine adenylyltransferase; Provisiona
99.68 PRK13964 140
coaD phosphopantetheine adenylyltransferase; Provi
99.65 cd02163 153
PPAT Phosphopantetheine adenylyltransferase. Phosp
99.63 cd02169 297
Citrate_lyase_ligase Citrate lyase ligase. Citrate
99.59 PLN02388 177
phosphopantetheine adenylyltransferase
99.58 PRK01170 322
phosphopantetheine adenylyltransferase/unknown dom
99.56 TIGR01510 155
coaD_prev_kdtB pantetheine-phosphate adenylyltrans
99.55 cd02166 163
NMNAT_Archaea Nicotinamide/nicotinate mononucleoti
99.53 TIGR01527 165
arch_NMN_Atrans nicotinamide-nucleotide adenylyltr
99.53 smart00764 182
Citrate_ly_lig Citrate lyase ligase C-terminal dom
99.52 PRK13670 388
hypothetical protein; Provisional
99.52 cd02164 143
PPAT_CoAS phosphopantetheine adenylyltransferase d
99.5 PF01467 157
CTP_transf_2: Cytidylyltransferase; InterPro: IPR0
99.47 PRK05379 340
bifunctional nicotinamide mononucleotide adenylylt
99.4 cd00560 277
PanC Pantoate-beta-alanine ligase. PanC Pantoate-b
99.38 PRK13671 298
hypothetical protein; Provisional
99.38 PRK00071 203
nadD nicotinic acid mononucleotide adenylyltransfe
99.36 cd02167 158
NMNAT_NadR Nicotinamide/nicotinate mononucleotide
99.35 PRK00380 281
panC pantoate--beta-alanine ligase; Reviewed
99.33 COG1019 158
Predicted nucleotidyltransferase [General function
99.31 PRK01153 174
nicotinamide-nucleotide adenylyltransferase; Provi
99.3 cd02156 105
nt_trans nucleotidyl transferase superfamily. nt_t
99.3 PRK08099 399
bifunctional DNA-binding transcriptional repressor
99.28 cd02165 192
NMNAT Nicotinamide/nicotinate mononucleotide adeny
99.26 cd02168 181
NMNAT_Nudix Nicotinamide/nicotinate mononucleotide
99.26 COG1057 197
NadD Nicotinic acid mononucleotide adenylyltransfe
99.23 PRK13793 196
nicotinamide-nucleotide adenylyltransferase; Provi
99.2 TIGR01526 325
nadR_NMN_Atrans nicotinamide-nucleotide adenylyltr
99.17 TIGR00124 332
cit_ly_ligase [citrate (pro-3S)-lyase] ligase. ATP
99.14 PRK06973 243
nicotinic acid mononucleotide adenylyltransferase;
99.14 TIGR00482 193
nicotinate (nicotinamide) nucleotide adenylyltrans
99.1 PRK07152 342
nadD putative nicotinate-nucleotide adenylyltransf
99.07 COG1056 172
NadR Nicotinamide mononucleotide adenylyltransfera
99.04 PRK08887 174
nicotinic acid mononucleotide adenylyltransferase;
98.98 PF05636 388
HIGH_NTase1: HIGH Nucleotidyl Transferase; InterPr
98.89 TIGR00018 282
panC pantoate--beta-alanine ligase. This family is
98.85 PLN02660 284
pantoate--beta-alanine ligase
98.83 cd09286 225
NMNAT_Eukarya Nicotinamide/nicotinate mononucleoti
98.8 PLN02945 236
nicotinamide-nucleotide adenylyltransferase/nicoti
98.62 KOG3351|consensus 293
98.55 COG1323 358
Predicted nucleotidyltransferase [General function
98.5 PF08218 182
Citrate_ly_lig: Citrate lyase ligase C-terminal do
98.08 TIGR00339 383
sopT ATP sulphurylase. Members of this family also
97.87 COG3053 352
CitC Citrate lyase synthetase [Energy production a
97.74 PRK13477 512
bifunctional pantoate ligase/cytidylate kinase; Pr
97.54 PF02569 280
Pantoate_ligase: Pantoate-beta-alanine ligase; Int
97.52 COG0414 285
PanC Panthothenate synthetase [Coenzyme metabolism
97.17 KOG3042|consensus 283
96.72 COG2046 397
MET3 ATP sulfurylase (sulfate adenylyltransferase)
96.68 cd00517 353
ATPS ATP-sulfurylase. ATP-sulfurylase (ATPS), also
96.48 PRK04149 391
sat sulfate adenylyltransferase; Reviewed
96.36 PF01747 215
ATP-sulfurylase: ATP-sulfurylase; InterPro: IPR002
95.83 PRK05537 568
bifunctional sulfate adenylyltransferase subunit 1
93.91 KOG3199|consensus 234
93.63
>cd02172 RfaE_N N-terminal domain of RfaE
Back Hide alignment and domain information
Probab=99.96 E-value=1.8e-28 Score=169.75 Aligned_cols=101 Identities=28% Similarity=0.390 Sum_probs=90.3
Q ss_pred CCceEEEEecccCcCCHHHHHHHHHHHHcCCeEEEEEecCcccccCCCCCCcCHHHHHHHHhhccCCCEEEEcCCCCCHH
Q psy11152 4 LNLLATSLQSNYDMVHFGHANNLRQAKELGNYLVVGVHTDEEISKHKGPPVFTQQERYKMVRGIKWVDEVVEGAPYVTTL 83 (112)
Q Consensus 4 ~~~~~v~~~G~FD~~H~GH~~ll~~a~~~~~~lvv~v~~d~~~~~~k~~~i~s~~eR~~~l~~~~~vd~vi~~~~~~~~~ 83 (112)
++.++|+++|+|||+|.||+++|++|++.++.++|++++++.+.+.+..+++|.+||.++++++++||.+++.+ ..+++
T Consensus 2 ~~~~~vv~~G~FDgvH~GH~~ll~~a~~~~~~~vv~~~~d~~~~~~~~~~i~~~~eR~~~l~~lg~VD~vi~~~-~~~~~ 80 (144)
T cd02172 2 RGKTVVLCHGVFDLLHPGHVRHLQAARSLGDILVVSLTSDRYVNKGPGRPIFPEDLRAEVLAALGFVDYVVLFD-NPTAL 80 (144)
T ss_pred CCCEEEEEecccCCCCHHHHHHHHHHHHhCCeEEEEEeChHHhccCCCCCCCCHHHHHHHHHccCCccEEEECC-CCCHH
Confidence 35678999999999999999999999999999999999998765545458999999999999996699999874 46899
Q ss_pred HHHHhcCCCEEEEcCCCCCCcc
Q psy11152 84 ETLDAYDCDFCVHGALEVLVSL 105 (112)
Q Consensus 84 ~fi~~l~~~~iv~G~D~~f~~~ 105 (112)
+|+++++++++|+|+||+||..
T Consensus 81 ~fi~~l~~~~vv~G~d~~fg~~ 102 (144)
T cd02172 81 EIIDALQPNIYVKGGDYENPEN 102 (144)
T ss_pred HHHHHhCCCEEEECCCcccCcc
Confidence 9999999999999999999864
RfaE is a protein involved in the biosynthesis of ADP-L-glycero-D-manno-heptose, a precursor for LPS inner core biosynthesis. RfaE is a bifunctional protein in Escherichia coli, and separate proteins in other organisms. Domain I is suggested to act in D-glycero-D-manno-heptose 1-phosphate biosynthesis, while domain II (this family) adds ADP to yield ADP-D-glycero-D-manno-heptose .
>TIGR02199 rfaE_dom_II rfaE bifunctional protein, domain II
Back Show alignment and domain information
Probab=99.96 E-value=4.9e-28 Score=167.55 Aligned_cols=102 Identities=28% Similarity=0.386 Sum_probs=89.9
Q ss_pred CCceEEEEecccCcCCHHHHHHHHHHHHcCCeEEEEEecCcccccCCC--CCCcCHHHHHHHHhhccCCCEEEEcCCCCC
Q psy11152 4 LNLLATSLQSNYDMVHFGHANNLRQAKELGNYLVVGVHTDEEISKHKG--PPVFTQQERYKMVRGIKWVDEVVEGAPYVT 81 (112)
Q Consensus 4 ~~~~~v~~~G~FD~~H~GH~~ll~~a~~~~~~lvv~v~~d~~~~~~k~--~~i~s~~eR~~~l~~~~~vd~vi~~~~~~~ 81 (112)
++.++++++|+||++|.||+++|++|++.|+.++|++++|+.....++ .|+++.+||.++++++++||.+++|++ .+
T Consensus 9 ~~~~~v~~~G~FDgvH~GH~~ll~~a~~~~~~~~v~v~~d~~~~~~k~~~~~l~~~eeR~~~l~~~~~VD~vi~f~~-~~ 87 (144)
T TIGR02199 9 RGKKIVFTNGCFDILHAGHVSYLQQARALGDRLVVGVNSDASVKRLKGETRPINPEEDRAEVLAALSSVDYVVIFDE-DT 87 (144)
T ss_pred cCCCEEEEeCcccccCHHHHHHHHHHHHhCCccEEEEECCcCHHHhCCCCCCcCCHHHHHHHHHhcCCCCEEEECCC-CC
Confidence 346899999999999999999999999999999999999987542232 479999999999999977999999864 78
Q ss_pred HHHHHHhcCCCEEEEcCCCCCCccc
Q psy11152 82 TLETLDAYDCDFCVHGALEVLVSLE 106 (112)
Q Consensus 82 ~~~fi~~l~~~~iv~G~D~~f~~~~ 106 (112)
+++|+++++++++|+|+||+|....
T Consensus 88 ~~~fi~~l~~~~vv~G~d~~~~~~~ 112 (144)
T TIGR02199 88 PEELIGELKPDILVKGGDYKVETLV 112 (144)
T ss_pred HHHHHHHhCCCEEEECCCCCCCcch
Confidence 9999999999999999999996543
RfaE is a protein involved in the biosynthesis of ADP-L-glycero-D-manno-heptose, a precursor for LPS inner core biosynthesis. RfaE is a bifunctional protein in E. coli, and separate proteins in some other genome. Domain I (TIGR02198) is suggested to act in D-glycero-D-manno-heptose 1-phosphate biosynthesis, while domain II (this family) adds ADP to yield ADP-D-glycero-D-manno-heptose.
>cd02174 CCT CTP:phosphocholine cytidylyltransferase
Back Show alignment and domain information
Probab=99.94 E-value=1.3e-26 Score=161.67 Aligned_cols=99 Identities=61% Similarity=1.031 Sum_probs=90.6
Q ss_pred ceEEEEecccCcCCHHHHHHHHHHHHcC--CeEEEEEecCcccccCCCCCCcCHHHHHHHHhhccCCCEEEEcCCCCCHH
Q psy11152 6 LLATSLQSNYDMVHFGHANNLRQAKELG--NYLVVGVHTDEEISKHKGPPVFTQQERYKMVRGIKWVDEVVEGAPYVTTL 83 (112)
Q Consensus 6 ~~~v~~~G~FD~~H~GH~~ll~~a~~~~--~~lvv~v~~d~~~~~~k~~~i~s~~eR~~~l~~~~~vd~vi~~~~~~~~~ 83 (112)
.++|++.|+||+||.||+++|++|++++ +.|+||+++|+.+...|+.|+++.+||.+++++|++||.|++.+++..+.
T Consensus 2 ~~rV~~~G~FDl~H~GHi~~L~~A~~lg~~d~LiVgV~sD~~~~~~k~~pi~~~~eR~~~l~~~~~Vd~Vi~~~~~~~~~ 81 (150)
T cd02174 2 PVRVYVDGCFDLFHYGHANALRQAKKLGPNDYLIVGVHSDEEIHKHKGPPVMTEEERYEAVRHCKWVDEVVEGAPYVTTP 81 (150)
T ss_pred CeEEEEeCccCCCCHHHHHHHHHHHHhCCCCEEEEEEecCHHHhhcCCCCcCCHHHHHHHHHhcCCCCeEEECCCCCChH
Confidence 4679999999999999999999999999 99999999999876666669999999999999999999999987766788
Q ss_pred HHHHhcCCCEEEEcCCCCCCc
Q psy11152 84 ETLDAYDCDFCVHGALEVLVS 104 (112)
Q Consensus 84 ~fi~~l~~~~iv~G~D~~f~~ 104 (112)
+|+++++||++++|+||..+.
T Consensus 82 ~~i~~~~~d~vv~G~d~~~~~ 102 (150)
T cd02174 82 EFLDKYKCDYVAHGDDIYLDA 102 (150)
T ss_pred HHHHHhCCCEEEECCCCCCCC
Confidence 999999999999999998643
CTP:phosphocholine cytidylyltransferase (CCT) catalyzes the condensation of CTP and phosphocholine to form CDP-choline as the rate-limiting and regulatory step in the CDP-choline pathway. CCT is unique in that its enzymatic activity is regulated by the extent of its association with membrane structures. A current model posts that the elastic stress of the bilayer curvature is sensed by CCT and this governs the degree of membrane association, thus providing a mechanism for both positive and negative regulation of activity.
>cd02173 ECT CTP:phosphoethanolamine cytidylyltransferase (ECT)
Back Show alignment and domain information
Probab=99.94 E-value=1.1e-25 Score=157.31 Aligned_cols=98 Identities=40% Similarity=0.674 Sum_probs=90.0
Q ss_pred ceEEEEecccCcCCHHHHHHHHHHHHcCCeEEEEEecCcccccCCC--CCCcCHHHHHHHHhhccCCCEEEEcCCCCCHH
Q psy11152 6 LLATSLQSNYDMVHFGHANNLRQAKELGNYLVVGVHTDEEISKHKG--PPVFTQQERYKMVRGIKWVDEVVEGAPYVTTL 83 (112)
Q Consensus 6 ~~~v~~~G~FD~~H~GH~~ll~~a~~~~~~lvv~v~~d~~~~~~k~--~~i~s~~eR~~~l~~~~~vd~vi~~~~~~~~~ 83 (112)
.++|++.|+||+||.||+.+|++|+++++.|+||+++|+.++..|+ .|++|.+||.+++++|++||.|++++++..+.
T Consensus 2 ~~iv~~~G~FD~~H~GHi~~L~~A~~lgd~liVgV~~D~~~~~~K~~~~pi~~~~eR~~~v~~~~~Vd~V~v~~~~~~~~ 81 (152)
T cd02173 2 DKVVYVDGAFDLFHIGHIEFLEKARELGDYLIVGVHDDQTVNEYKGSNYPIMNLHERVLSVLACRYVDEVVIGAPYVITK 81 (152)
T ss_pred CeEEEEcCcccCCCHHHHHHHHHHHHcCCEEEEEEeCcHHHHhhcCCCCCCCCHHHHHHHHHhcCCCCEEEECCCCcchH
Confidence 4689999999999999999999999999999999999988766565 38999999999999999999999987776788
Q ss_pred HHHHhcCCCEEEEcCCCCCC
Q psy11152 84 ETLDAYDCDFCVHGALEVLV 103 (112)
Q Consensus 84 ~fi~~l~~~~iv~G~D~~f~ 103 (112)
+|+++++|+++++|.||...
T Consensus 82 ~~~~~~~~d~vv~G~d~~~~ 101 (152)
T cd02173 82 ELIEHFKIDVVVHGKTEETP 101 (152)
T ss_pred HHHHHhCCCEEEECCCCccc
Confidence 99999999999999999864
CTP:phosphoethanolamine cytidylyltransferase (ECT) catalyzes the conversion of phosphoethanolamine to CDP-ethanolamine as part of the CDP-ethanolamine biosynthesis pathway. ECT expression in hepatocytes is localized predominantly to areas of the cytoplasm that are rich in rough endoplasmic reticulum. Several ECTs, including yeast and human ECT, have large repetitive sequences located within their N- and C-termini.
>PTZ00308 ethanolamine-phosphate cytidylyltransferase; Provisional
Back Show alignment and domain information
Probab=99.93 E-value=7.4e-26 Score=176.06 Aligned_cols=100 Identities=53% Similarity=0.919 Sum_probs=91.5
Q ss_pred CceEEEEecccCcCCHHHHHHHHHHHHcCCeEEEEEecCcccccCCCCCCcCHHHHHHHHhhccCCCEEEEcCCCCCHHH
Q psy11152 5 NLLATSLQSNYDMVHFGHANNLRQAKELGNYLVVGVHTDEEISKHKGPPVFTQQERYKMVRGIKWVDEVVEGAPYVTTLE 84 (112)
Q Consensus 5 ~~~~v~~~G~FD~~H~GH~~ll~~a~~~~~~lvv~v~~d~~~~~~k~~~i~s~~eR~~~l~~~~~vd~vi~~~~~~~~~~ 84 (112)
++.+|++.|+||++|.||+++|++|++.++.|+|++++|..+.+.|++|+++.+||++++++|++||+|++..|+.++.+
T Consensus 10 ~~~~v~~~G~FD~vH~GH~~~L~qAk~~g~~Livgv~~d~~i~~~K~~pi~~~eeR~~~l~~~~~VD~Vv~~~p~~~~~~ 89 (353)
T PTZ00308 10 GTIRVWVDGCFDMLHFGHANALRQARALGDELFVGCHSDEEIMRNKGPPVMHQEERYEALRACKWVDEVVEGYPYTTRLE 89 (353)
T ss_pred CcEEEEEEeecccCCHHHHHHHHHHHHhCCEEEEEeCCHHHHhhcCCCCCCCHHHHHHHHHhcCCccEEEECCCCCchHH
Confidence 35789999999999999999999999999999999999998776677789999999999999988999998445667788
Q ss_pred HHHhcCCCEEEEcCCCCCCc
Q psy11152 85 TLDAYDCDFCVHGALEVLVS 104 (112)
Q Consensus 85 fi~~l~~~~iv~G~D~~f~~ 104 (112)
|+++++|+++++|+||+||.
T Consensus 90 fI~~l~~d~vv~GdD~~~g~ 109 (353)
T PTZ00308 90 DLERLECDFVVHGDDISVDL 109 (353)
T ss_pred HHHHhCCCEEEECCCCCCCC
Confidence 99999999999999999985
>cd02170 cytidylyltransferase cytidylyltransferase
Back Show alignment and domain information
Probab=99.93 E-value=1.8e-25 Score=152.43 Aligned_cols=98 Identities=33% Similarity=0.569 Sum_probs=85.0
Q ss_pred ceEEEEecccCcCCHHHHHHHHHHHHcCCeEEEEEecCcccccCCCCCCcCHHHHHHHHhhccCCCEEEEcCCCCCHHHH
Q psy11152 6 LLATSLQSNYDMVHFGHANNLRQAKELGNYLVVGVHTDEEISKHKGPPVFTQQERYKMVRGIKWVDEVVEGAPYVTTLET 85 (112)
Q Consensus 6 ~~~v~~~G~FD~~H~GH~~ll~~a~~~~~~lvv~v~~d~~~~~~k~~~i~s~~eR~~~l~~~~~vd~vi~~~~~~~~~~f 85 (112)
|++++++|+|||+|.||+.++++|++.++.+++++++++...+.++.+++|.+||.+++++|++||.+++.+++. ..+.
T Consensus 1 ~~~v~~~G~FD~~H~GH~~ll~~a~~~~~~l~v~v~~~~~~~~~~~~~~~~~~eR~~~l~~~~~vd~v~~~~~~~-~~~~ 79 (136)
T cd02170 1 MKRVYAAGTFDIIHPGHIRFLEEAKKLGDYLIVGVARDETVAKIKRRPILPEEQRAEVVEALKYVDEVILGHPWS-YFKP 79 (136)
T ss_pred CeEEEEcCccCCCCHHHHHHHHHHHHhCCEEEEEECCcHHHHhcCCCCCCCHHHHHHHHHcCCCcCEEEECCCCC-HhHH
Confidence 468999999999999999999999999999999999998765545458999999999999999999999876643 3334
Q ss_pred HHhcCCCEEEEcCCCCCCc
Q psy11152 86 LDAYDCDFCVHGALEVLVS 104 (112)
Q Consensus 86 i~~l~~~~iv~G~D~~f~~ 104 (112)
+.+++++++|+|+||+||.
T Consensus 80 l~~~~~~~vv~G~d~~fg~ 98 (136)
T cd02170 80 LEELKPDVIVLGDDQKNGV 98 (136)
T ss_pred HHHHCCCEEEECCCCCCCC
Confidence 5779999999999999985
The cytidylyltransferase family includes cholinephosphate cytidylyltransferase (CCT), glycerol-3-phosphate cytidylyltransferase, RafE and phosphoethanolamine cytidylyltransferase (ECT). All enzymes catalyze the transfer of a cytidylyl group from CTP to various substrates.
>TIGR01518 g3p_cytidyltrns glycerol-3-phosphate cytidylyltransferase
Back Show alignment and domain information
Probab=99.93 E-value=1.6e-25 Score=151.20 Aligned_cols=93 Identities=26% Similarity=0.424 Sum_probs=80.7
Q ss_pred EEEecccCcCCHHHHHHHHHHHHcCCeEEEEEecCcccccCCCCCCcCHHHHHHHHhhccCCCEEEEcCCCCCHHHHHHh
Q psy11152 9 TSLQSNYDMVHFGHANNLRQAKELGNYLVVGVHTDEEISKHKGPPVFTQQERYKMVRGIKWVDEVVEGAPYVTTLETLDA 88 (112)
Q Consensus 9 v~~~G~FD~~H~GH~~ll~~a~~~~~~lvv~v~~d~~~~~~k~~~i~s~~eR~~~l~~~~~vd~vi~~~~~~~~~~fi~~ 88 (112)
|++.|+||++|.||+++|++|++.|+.++|++++|+....++..+++|.+||.++++++++||.++.+.++....+++++
T Consensus 1 v~~~G~FDg~H~GH~~~l~~a~~~~~~~iv~v~~d~~~~~~~~~~i~~~eeR~~~l~~~~~Vd~vi~~~~~~~f~~~l~~ 80 (125)
T TIGR01518 1 VLTYGTFDLLHWGHINLLERAKQLGDYLIVALSTDEFNLQKQKKAYHSYEHRKLILETIRYVDLVIPEKSWEQKKQDIID 80 (125)
T ss_pred CEEcceeCCCCHHHHHHHHHHHHcCCEEEEEEechHHHhhcCCCCCCCHHHHHHHHHcCCCccEEecCCCccchHHHHHH
Confidence 57899999999999999999999999999999999865443444899999999999999889999877655445566789
Q ss_pred cCCCEEEEcCCCC
Q psy11152 89 YDCDFCVHGALEV 101 (112)
Q Consensus 89 l~~~~iv~G~D~~ 101 (112)
++++++++|+||.
T Consensus 81 ~~~~~vv~G~D~~ 93 (125)
T TIGR01518 81 FNIDVFVMGDDWE 93 (125)
T ss_pred cCCCEEEECCCcc
Confidence 9999999999994
Glycerol-3-phosphate cytidyltransferase acts in pathways of teichoic acid biosynthesis. Teichoic acids are substituted polymers, linked by phosphodiester bonds, of glycerol, ribitol, etc. An example is poly(glycerol phosphate), the major teichoic acid of the Bacillus subtilis cell wall. Most but not all species encoding proteins in this family are Gram-positive bacteria.
>COG0615 TagD Cytidylyltransferase [Cell envelope biogenesis, outer membrane / Lipid metabolism]
Back Show alignment and domain information
Probab=99.93 E-value=2.6e-25 Score=152.91 Aligned_cols=98 Identities=33% Similarity=0.566 Sum_probs=88.0
Q ss_pred eEEEEecccCcCCHHHHHHHHHHHHcCCeEEEEEecCccccc-CCCCCCcCHHHHHHHHhhccCCCEEEEcCCCCCHHHH
Q psy11152 7 LATSLQSNYDMVHFGHANNLRQAKELGNYLVVGVHTDEEISK-HKGPPVFTQQERYKMVRGIKWVDEVVEGAPYVTTLET 85 (112)
Q Consensus 7 ~~v~~~G~FD~~H~GH~~ll~~a~~~~~~lvv~v~~d~~~~~-~k~~~i~s~~eR~~~l~~~~~vd~vi~~~~~~~~~~f 85 (112)
.+|++.|+||.+|.||.+.|++|++++++++|.+.+|+...+ ++++|+++.++|++++++|++||.|++..||....++
T Consensus 2 ~rV~~~GtFDilH~GHi~~L~~Ak~lGd~liVv~a~de~~~~~~k~~pi~~~~qR~evl~s~ryVD~vi~~~p~~~~~~~ 81 (140)
T COG0615 2 KRVWADGTFDILHPGHIEFLRQAKKLGDELIVVVARDETVIKRKKRKPIMPEEQRAEVLESLRYVDEVILGAPWDIKFED 81 (140)
T ss_pred cEEEEeeEEEEechhHHHHHHHHHHhCCeEEEEEeccHHHHHhcCCCCCCCHHHHHHHHHcCcchheeeeCCccccChHH
Confidence 469999999999999999999999999988888888776654 5666999999999999999999999998888665779
Q ss_pred HHhcCCCEEEEcCCCCCCc
Q psy11152 86 LDAYDCDFCVHGALEVLVS 104 (112)
Q Consensus 86 i~~l~~~~iv~G~D~~f~~ 104 (112)
+++++||++++|+|++|..
T Consensus 82 i~~~k~Div~lG~D~~~d~ 100 (140)
T COG0615 82 IEEYKPDIVVLGDDQKFDE 100 (140)
T ss_pred HHHhCCCEEEECCCCcCCh
Confidence 9999999999999999654
>cd02171 G3P_Cytidylyltransferase glycerol-3-phosphate cytidylyltransferase
Back Show alignment and domain information
Probab=99.93 E-value=5.6e-25 Score=148.86 Aligned_cols=96 Identities=28% Similarity=0.449 Sum_probs=79.8
Q ss_pred ceEEEEecccCcCCHHHHHHHHHHHHcCCeEEEEEecCcccccCCCCCCcCHHHHHHHHhhccCCCEEEEcCCCCCHHHH
Q psy11152 6 LLATSLQSNYDMVHFGHANNLRQAKELGNYLVVGVHTDEEISKHKGPPVFTQQERYKMVRGIKWVDEVVEGAPYVTTLET 85 (112)
Q Consensus 6 ~~~v~~~G~FD~~H~GH~~ll~~a~~~~~~lvv~v~~d~~~~~~k~~~i~s~~eR~~~l~~~~~vd~vi~~~~~~~~~~f 85 (112)
|++++++|+|||+|.||+.+|++|++.++++++++++|+.....+..+++|.++|+++++++++||.++.+.++....+.
T Consensus 1 ~~~v~~~G~FDgvH~GH~~ll~~a~~~~~~l~v~v~~d~~~~~~~~~~~~~~~~R~~~l~~~~~vd~v~~~~~~~~f~~~ 80 (129)
T cd02171 1 MKVVITYGTFDLLHIGHLNLLERAKALGDKLIVAVSTDEFNAGKGKKAVIPYEQRAEILESIRYVDLVIPETNWEQKIED 80 (129)
T ss_pred CcEEEEeeeeccCCHHHHHHHHHHHHhCCEEEEEEeccHhHHhcCCCCCCCHHHHHHHHHcCCccCEEecCCCccChHHH
Confidence 46899999999999999999999999999999999888743322223899999999999999779999866443333444
Q ss_pred HHhcCCCEEEEcCCCC
Q psy11152 86 LDAYDCDFCVHGALEV 101 (112)
Q Consensus 86 i~~l~~~~iv~G~D~~ 101 (112)
+++++++++++|+||.
T Consensus 81 ~~~l~~~~vv~G~d~~ 96 (129)
T cd02171 81 IKKYNVDVFVMGDDWE 96 (129)
T ss_pred HHHhCCCEEEECCCCc
Confidence 6789999999999995
Glycerol-3-phosphate cytidylyltransferase,(CDP-glycerol pyrophosphorylase). Glycerol-3-phosphate cytidyltransferase acts in pathways of teichoic acid biosynthesis. Teichoic acids are substituted polymers, linked by phosphodiester bonds, of glycerol, ribitol, etc. An example is poly(glycerol phosphate), the major teichoic acid of the Bacillus subtilis cell wall. Most, but not all, species encoding proteins in this family are Gram-positive bacteria. A closely related protein assigned a different function experimentally is a human ethanolamine-phosphate cytidylyltransferase.
>PF06574 FAD_syn: FAD synthetase; InterPro: IPR015864 Riboflavin is converted into catalytically active cofactors (FAD and FMN) by the actions of riboflavin kinase (2
Back Show alignment and domain information
Probab=99.92 E-value=1.6e-25 Score=157.23 Aligned_cols=101 Identities=18% Similarity=0.246 Sum_probs=73.9
Q ss_pred CCceEEEEecccCcCCHHHHHHHHHHHHcCC-----eEEEEEecCcc--cccCCCC-CCcCHHHHHHHHhhccCCCEEEE
Q psy11152 4 LNLLATSLQSNYDMVHFGHANNLRQAKELGN-----YLVVGVHTDEE--ISKHKGP-PVFTQQERYKMVRGIKWVDEVVE 75 (112)
Q Consensus 4 ~~~~~v~~~G~FD~~H~GH~~ll~~a~~~~~-----~lvv~v~~d~~--~~~~k~~-~i~s~~eR~~~l~~~~~vd~vi~ 75 (112)
.+++.++++|+|||+|+|||+||++|++.++ .+++++.++|. ..+.+.+ .++|.+||.++++++ |||++++
T Consensus 3 ~~~~~~v~iG~FDGvH~GHq~Li~~~~~~a~~~~~~~~v~tF~~~P~~~~~~~~~~~~l~s~~ek~~~l~~~-Gvd~~~~ 81 (157)
T PF06574_consen 3 NNKKSVVAIGNFDGVHLGHQKLIKKAVEIAKEKGLKSVVLTFDPHPKEVLNPDKPPKLLTSLEEKLELLESL-GVDYVIV 81 (157)
T ss_dssp T-S-EEEEES--TT--HHHHHHHHHHHHHHHHCT-EEEEEEESS-CHHHHSCTCCGGBSS-HHHHHHHHHHT-TESEEEE
T ss_pred CCCCcEEEEeCCCCccHHHHHHHHHHhhhhhhcccceEEEEcccCHHHHhcCCCcccCCCCHHHHHHHHHHc-CCCEEEE
Confidence 3568899999999999999999999999872 24666666663 2323333 699999999999999 8999876
Q ss_pred --cCCC---CCHHHHHH-----hcCCCEEEEcCCCCCCcc
Q psy11152 76 --GAPY---VTTLETLD-----AYDCDFCVHGALEVLVSL 105 (112)
Q Consensus 76 --~~~~---~~~~~fi~-----~l~~~~iv~G~D~~f~~~ 105 (112)
|+++ +++++|++ +++++.||+|+||+||.-
T Consensus 82 ~~F~~~~~~ls~~~Fi~~iL~~~l~~~~ivvG~DfrFG~~ 121 (157)
T PF06574_consen 82 IPFTEEFANLSPEDFIEKILKEKLNVKHIVVGEDFRFGKN 121 (157)
T ss_dssp E-CCCHHCCS-HHHHHHHHCCCHCTEEEEEEETT-EESGG
T ss_pred ecchHHHHcCCHHHHHHHHHHhcCCccEEEEccCccCCCC
Confidence 7653 79999984 589999999999999974
7.1.26 from EC), which converts it into FMN, and FAD synthetase (2.7.7.2 from EC), which adenylates FMN to FAD. Eukaryotes usually have two separate enzymes, while most prokaryotes have a single bifunctional protein that can carry out both catalyses, although exceptions occur in both cases. While eukaryotic monofunctional riboflavin kinase is orthologous to the bifunctional prokaryotic enzyme [], the monofunctional FAD synthetase differs from its prokaryotic counterpart, and is instead related to the PAPS-reductase family []. The bacterial FAD synthetase that is part of the bifunctional enzyme has remote similarity to nucleotidyl transferases and, hence, it may be involved in the adenylylation reaction of FAD synthetases []. This entry represents prokaryotic-type FAD synthetase, which occurs primarily as part of a bifunctional enzyme.; GO: 0003919 FMN adenylyltransferase activity, 0009231 riboflavin biosynthetic process; PDB: 2X0K_B 3OP1_B 1T6Z_A 2I1L_A 1T6Y_B 1T6X_B 1S4M_A 1MRZ_A.
>PTZ00308 ethanolamine-phosphate cytidylyltransferase; Provisional
Back Show alignment and domain information
Probab=99.91 E-value=1.1e-23 Score=164.02 Aligned_cols=101 Identities=38% Similarity=0.631 Sum_probs=92.1
Q ss_pred ceEEEEecccCcCCHHHHHHHHHHHHcCCeEEEEEecCcccccCCC--CCCcCHHHHHHHHhhccCCCEEEEcCCCCCHH
Q psy11152 6 LLATSLQSNYDMVHFGHANNLRQAKELGNYLVVGVHTDEEISKHKG--PPVFTQQERYKMVRGIKWVDEVVEGAPYVTTL 83 (112)
Q Consensus 6 ~~~v~~~G~FD~~H~GH~~ll~~a~~~~~~lvv~v~~d~~~~~~k~--~~i~s~~eR~~~l~~~~~vd~vi~~~~~~~~~ 83 (112)
.++|++.|+||+||.||+++|++|+++++.|+||+++|+..+..|+ .|+++.+||.+++++|++||.|+++.++..+.
T Consensus 192 ~kiv~~~G~FDl~H~GHi~~L~~A~~lgd~LIVgV~sD~~v~~~Kg~~~Pi~~~~eR~~~v~a~~~Vd~Vvi~~~~~~~~ 271 (353)
T PTZ00308 192 DRIVYVDGSFDLFHIGHIRVLQKARELGDYLIVGVHEDQVVNEQKGSNYPIMNLNERVLGVLSCRYVDEVVIGAPFDVTK 271 (353)
T ss_pred CeEEEECCccCCCCHHHHHHHHHHHHhCCEEEEEEcchHHhHhhcCCCCCCCCHHHHHHHHHhhCCCCeEEEcCCCCChH
Confidence 4789999999999999999999999999999999999998876666 38999999999999999999999987777889
Q ss_pred HHHHhcCCCEEEEcCCCCCCccc
Q psy11152 84 ETLDAYDCDFCVHGALEVLVSLE 106 (112)
Q Consensus 84 ~fi~~l~~~~iv~G~D~~f~~~~ 106 (112)
+|+++++|+++|+|.||.-.+.+
T Consensus 272 ~~i~~~~~d~vv~G~d~~~~~~~ 294 (353)
T PTZ00308 272 EVIDSLHINVVVGGKFSDLVNEE 294 (353)
T ss_pred HHHHHhCCCEEEECCCCccccCC
Confidence 99999999999999999864444
>PLN02406 ethanolamine-phosphate cytidylyltransferase
Back Show alignment and domain information
Probab=99.90 E-value=1.9e-23 Score=164.97 Aligned_cols=98 Identities=33% Similarity=0.664 Sum_probs=91.6
Q ss_pred CCceEEEEecccCcCCHHHHHHHHHHHHcCCeEEEEEecCcccccCCC--CCCcCHHHHHHHHhhccCCCEEEEcCCCCC
Q psy11152 4 LNLLATSLQSNYDMVHFGHANNLRQAKELGNYLVVGVHTDEEISKHKG--PPVFTQQERYKMVRGIKWVDEVVEGAPYVT 81 (112)
Q Consensus 4 ~~~~~v~~~G~FD~~H~GH~~ll~~a~~~~~~lvv~v~~d~~~~~~k~--~~i~s~~eR~~~l~~~~~vd~vi~~~~~~~ 81 (112)
++.++|++.|+||.||.||+++|++|+++++.|+||+++|+.++..|+ .|+++++||.+++++|++||.|+++.|+..
T Consensus 249 ~~~~iVyv~G~FDlfH~GHi~~L~~Ak~lGd~LIVGV~sD~~v~~~KG~~~Pi~~~~ER~~~v~ack~VD~VVi~ap~~~ 328 (418)
T PLN02406 249 PDARIVYIDGAFDLFHAGHVEILRLARALGDFLLVGIHTDQTVSAHRGAHRPIMNLHERSLSVLACRYVDEVIIGAPWEV 328 (418)
T ss_pred CCCeEEEECCeeccCCHHHHHHHHHHHHhCCEEEEEEeccHHHHHhcCCCCCCCCHHHHHHHHhccCcccEEEeCCCCCC
Confidence 457899999999999999999999999999999999999998876676 499999999999999999999999999888
Q ss_pred HHHHHHhcCCCEEEEcCCCC
Q psy11152 82 TLETLDAYDCDFCVHGALEV 101 (112)
Q Consensus 82 ~~~fi~~l~~~~iv~G~D~~ 101 (112)
++++++++++|++|+|+||.
T Consensus 329 ~~~~i~~~~~d~vvhG~~~~ 348 (418)
T PLN02406 329 SKDMITTFNISLVVHGTVAE 348 (418)
T ss_pred CHHHHHHhCCCEEEECCcCC
Confidence 99999999999999999874
>PLN02413 choline-phosphate cytidylyltransferase
Back Show alignment and domain information
Probab=99.90 E-value=4e-23 Score=155.82 Aligned_cols=93 Identities=46% Similarity=0.708 Sum_probs=87.0
Q ss_pred ceEEEEecccCcCCHHHHHHHHHHHHcC--CeEEEEEecCcccccCCCCCCcCHHHHHHHHhhccCCCEEEEcCCCCCHH
Q psy11152 6 LLATSLQSNYDMVHFGHANNLRQAKELG--NYLVVGVHTDEEISKHKGPPVFTQQERYKMVRGIKWVDEVVEGAPYVTTL 83 (112)
Q Consensus 6 ~~~v~~~G~FD~~H~GH~~ll~~a~~~~--~~lvv~v~~d~~~~~~k~~~i~s~~eR~~~l~~~~~vd~vi~~~~~~~~~ 83 (112)
..+|++.|+||.||.||+++|++|++++ +.|+||+++|+...+.|+.|+++.+||.+++++|++||.|++..||..+.
T Consensus 27 ~~rVyvdG~FDLfH~GHir~L~qAK~lg~~d~LIVGV~sDe~v~~~KGrPIm~~~ER~e~V~acKyVDeVV~~aP~~~t~ 106 (294)
T PLN02413 27 PVRVYADGIYDLFHFGHARSLEQAKKLFPNTYLLVGCCNDELTHKYKGKTVMTEDERYESLRHCKWVDEVIPDAPWVITQ 106 (294)
T ss_pred ceEEEEeCchhhCCHHHHHHHHHHHHhCCCCEEEEEecccHHHHhcCCCCCCCHHHHHHHHHhcccccEEeeCCCccccH
Confidence 5689999999999999999999999996 68999999999887778889999999999999999999999988887788
Q ss_pred HHHHhcCCCEEEEcC
Q psy11152 84 ETLDAYDCDFCVHGA 98 (112)
Q Consensus 84 ~fi~~l~~~~iv~G~ 98 (112)
+|+++++||++++|+
T Consensus 107 efI~~~kpDiVvhGd 121 (294)
T PLN02413 107 EFLDKHRIDYVAHDA 121 (294)
T ss_pred HHHHHhCCCEEEECC
Confidence 999999999999995
>PRK07143 hypothetical protein; Provisional
Back Show alignment and domain information
Probab=99.90 E-value=6.1e-23 Score=155.48 Aligned_cols=99 Identities=14% Similarity=0.169 Sum_probs=80.1
Q ss_pred CceEEEEecccCcCCHHHHHHHHHHHHcCCeEEEEEecCcccc-cCCCCCCcCHHHHHHHHhhccCCCEEEE--cCCC--
Q psy11152 5 NLLATSLQSNYDMVHFGHANNLRQAKELGNYLVVGVHTDEEIS-KHKGPPVFTQQERYKMVRGIKWVDEVVE--GAPY-- 79 (112)
Q Consensus 5 ~~~~v~~~G~FD~~H~GH~~ll~~a~~~~~~lvv~v~~d~~~~-~~k~~~i~s~~eR~~~l~~~~~vd~vi~--~~~~-- 79 (112)
+.+.++++|+|||+|+|||++|++|++.+...+|....+|... ..+..+++|.++|.++++++ |+|.+++ |+++
T Consensus 14 ~~~~vvaiG~FDGvH~GHq~Ll~~a~~~~~~~vV~tF~~P~~~~~~~~~~l~~~~er~~~l~~~-Gvd~~~~~~F~~~~a 92 (279)
T PRK07143 14 FEKPTFVLGGFESFHLGHLELFKKAKESNDEIVIVIFKNPENLPKNTNKKFSDLNSRLQTLANL-GFKNIILLDFNEELQ 92 (279)
T ss_pred CCCeEEEEccCCcCCHHHHHHHHHHHHCCCcEEEEEeCChHHhcccCcccCCCHHHHHHHHHHC-CCCEEEEeCCCHHHh
Confidence 4578999999999999999999999998776555444455421 22222699999999999999 8999886 6644
Q ss_pred -CCHHHHHHh---cCCCEEEEcCCCCCCc
Q psy11152 80 -VTTLETLDA---YDCDFCVHGALEVLVS 104 (112)
Q Consensus 80 -~~~~~fi~~---l~~~~iv~G~D~~f~~ 104 (112)
+++++|++. ++++.||+|+||+||.
T Consensus 93 ~ls~e~Fi~~ll~l~~~~iVvG~Df~FG~ 121 (279)
T PRK07143 93 NLSGNDFIEKLTKNQVSFFVVGKDFRFGK 121 (279)
T ss_pred CCCHHHHHHHHHhcCCCEEEECCCcccCC
Confidence 789999865 8999999999999995
>cd02064 FAD_synthetase_N FAD synthetase, N-terminal domain of the bifunctional enzyme
Back Show alignment and domain information
Probab=99.90 E-value=2.2e-23 Score=148.61 Aligned_cols=97 Identities=18% Similarity=0.203 Sum_probs=75.8
Q ss_pred EEEEecccCcCCHHHHHHHHHHHHcCCe-----EEEEEecCccc--ccCCCC-CCcCHHHHHHHHhhccCCCEEEE--cC
Q psy11152 8 ATSLQSNYDMVHFGHANNLRQAKELGNY-----LVVGVHTDEEI--SKHKGP-PVFTQQERYKMVRGIKWVDEVVE--GA 77 (112)
Q Consensus 8 ~v~~~G~FD~~H~GH~~ll~~a~~~~~~-----lvv~v~~d~~~--~~~k~~-~i~s~~eR~~~l~~~~~vd~vi~--~~ 77 (112)
.++++|+|||+|.||+++|++|++.|+. +++++.+.|.. .+.+.. +++|.++|+++++++ +||.+++ |+
T Consensus 1 ~vv~iG~FDgvH~GH~~ll~~a~~~a~~~~~~~vvv~f~~~p~~~~~~~~~~~~l~~~e~R~~~l~~l-~vd~v~~~~f~ 79 (180)
T cd02064 1 TVVAIGNFDGVHLGHQALIKTLKKIARERGLPSAVLTFDPHPREVFLPDKAPPRLTTLEEKLELLESL-GVDYLLVLPFD 79 (180)
T ss_pred CEEEEecCCccCHHHHHHHHHHHHHHHHcCCCeEEEEECCCHHHHhCCCCCCCcCCCHHHHHHHHHHc-CCCEEEEeCCC
Confidence 3789999999999999999999999752 34444444421 222333 799999999999999 6999987 65
Q ss_pred CC---CCHHHHHHh----cCCCEEEEcCCCCCCcc
Q psy11152 78 PY---VTTLETLDA----YDCDFCVHGALEVLVSL 105 (112)
Q Consensus 78 ~~---~~~~~fi~~----l~~~~iv~G~D~~f~~~ 105 (112)
++ +++++|+++ ++++++|+|+||+||..
T Consensus 80 ~~~~~~s~~~Fi~~il~~~~~~~ivvG~Df~FG~~ 114 (180)
T cd02064 80 KEFASLSAEEFVEDLLVKLNAKHVVVGFDFRFGKG 114 (180)
T ss_pred HHHHcCCHHHHHHHHHhhcCCeEEEEccCCCCCCC
Confidence 42 689999754 38999999999999853
FAD synthetase_N. N-terminal domain of the bifunctional riboflavin biosynthesis protein riboflavin kinase/FAD synthetase. These enzymes have both ATP:riboflavin 5'-phosphotransferase and ATP:FMN-adenylyltransferase activities. The N-terminal domain is believed to play a role in the adenylylation reaction of FAD synthetases. The C-terminal domain is thought to have kinase activity. FAD synthetase is present among all kingdoms of life. However, the bifunctional enzyme is not found in mammals, which use separate enzymes for FMN and FAD formation.
>PLN02406 ethanolamine-phosphate cytidylyltransferase
Back Show alignment and domain information
Probab=99.89 E-value=6.4e-23 Score=162.01 Aligned_cols=99 Identities=48% Similarity=0.841 Sum_probs=88.5
Q ss_pred CceEEEEecccCcCCHHHHHHHHHHHHcCCeEEEEEecCcccccCCCCCCcCHHHHHHHHhhccCCCEEEEcCCCCCHHH
Q psy11152 5 NLLATSLQSNYDMVHFGHANNLRQAKELGNYLVVGVHTDEEISKHKGPPVFTQQERYKMVRGIKWVDEVVEGAPYVTTLE 84 (112)
Q Consensus 5 ~~~~v~~~G~FD~~H~GH~~ll~~a~~~~~~lvv~v~~d~~~~~~k~~~i~s~~eR~~~l~~~~~vd~vi~~~~~~~~~~ 84 (112)
+..+|++.|+||++|.||.++|++|+++++.|+||+++|+.+.+.|++|++|.+||++++++|++||+|++..|+....+
T Consensus 52 ~~~rV~~~G~FDllH~GH~~~L~qAk~lGd~LIVGV~SDe~i~~~Kg~PV~~~eER~~~v~alk~VD~Vv~~apy~~~~d 131 (418)
T PLN02406 52 KPVRVYMDGCFDMMHYGHANALRQARALGDELVVGVVSDEEIIANKGPPVTPMHERMIMVSGVKWVDEVIPDAPYAITEE 131 (418)
T ss_pred CceEEEEcCeeCCCCHHHHHHHHHHHHhCCEEEEEEecChhhhccCCCCcCCHHHHHHHHHhcCCCceEEeCCccccchH
Confidence 34689999999999999999999999999999999999998877787899999999999999999999999767644556
Q ss_pred HH----HhcCCCEEEEcCCCCCC
Q psy11152 85 TL----DAYDCDFCVHGALEVLV 103 (112)
Q Consensus 85 fi----~~l~~~~iv~G~D~~f~ 103 (112)
|+ ++++||++|+|+||...
T Consensus 132 ~~~~li~~~~~D~vVhGdD~~~~ 154 (418)
T PLN02406 132 FMNKLFNEYNIDYIIHGDDPCLL 154 (418)
T ss_pred HHHHHHHHhCCCEEEECCCcccc
Confidence 65 58999999999999853
>KOG2803|consensus
Back Show alignment and domain information
Probab=99.89 E-value=1.6e-23 Score=159.18 Aligned_cols=95 Identities=64% Similarity=1.086 Sum_probs=90.7
Q ss_pred eEEEEecccCcCCHHHHHHHHHHHHcCCeEEEEEecCcccccCCCCCCcCHHHHHHHHhhccCCCEEEEcCCCCCHHHHH
Q psy11152 7 LATSLQSNYDMVHFGHANNLRQAKELGNYLVVGVHTDEEISKHKGPPVFTQQERYKMVRGIKWVDEVVEGAPYVTTLETL 86 (112)
Q Consensus 7 ~~v~~~G~FD~~H~GH~~ll~~a~~~~~~lvv~v~~d~~~~~~k~~~i~s~~eR~~~l~~~~~vd~vi~~~~~~~~~~fi 86 (112)
-+|++.|+||.+|.||.+.|+||+++++.|+|||++|+.+..+||+|+++.+||++++++++|||+||...|+.+..+++
T Consensus 9 ~rVw~DGCfDm~HyGHanaLrQAkalGdkLivGVHsDeeI~~nKGpPV~t~eERy~~v~~ikWVDEVV~~APyvtt~~~m 88 (358)
T KOG2803|consen 9 VRVWADGCFDMVHYGHANALRQAKALGDKLIVGVHSDEEITLNKGPPVFTDEERYEMVKAIKWVDEVVEGAPYVTTLEWM 88 (358)
T ss_pred eeEEeccchhhhhhhhhHHHHHHHHhCCeEEEEecchHHHHhcCCCCcccHHHHHHHHhhcchhhhhhcCCCeeccHHHH
Confidence 46999999999999999999999999999999999999998889999999999999999999999999988887888999
Q ss_pred HhcCCCEEEEcCCCC
Q psy11152 87 DAYDCDFCVHGALEV 101 (112)
Q Consensus 87 ~~l~~~~iv~G~D~~ 101 (112)
+++++|++|+|+|-+
T Consensus 89 d~y~cd~vvHGdDit 103 (358)
T KOG2803|consen 89 DKYGCDYVVHGDDIT 103 (358)
T ss_pred HHhCCeEEEeCCcce
Confidence 999999999999965
>PRK05627 bifunctional riboflavin kinase/FMN adenylyltransferase; Reviewed
Back Show alignment and domain information
Probab=99.88 E-value=2.6e-22 Score=153.69 Aligned_cols=96 Identities=19% Similarity=0.219 Sum_probs=77.1
Q ss_pred EEEEecccCcCCHHHHHHHHHHHHcCCeE-----EEEEecCcc--cccCCCC-CCcCHHHHHHHHhhccCCCEEEE--cC
Q psy11152 8 ATSLQSNYDMVHFGHANNLRQAKELGNYL-----VVGVHTDEE--ISKHKGP-PVFTQQERYKMVRGIKWVDEVVE--GA 77 (112)
Q Consensus 8 ~v~~~G~FD~~H~GH~~ll~~a~~~~~~l-----vv~v~~d~~--~~~~k~~-~i~s~~eR~~~l~~~~~vd~vi~--~~ 77 (112)
+++++|+|||+|.||+++|++|++.|+.+ ++++.+.|. ..+.+.+ +++|.+||+++++++ +||.+++ |+
T Consensus 15 ~vv~iG~FDGvH~GHq~Ll~~a~~~a~~~~~~~~vitFd~~p~~~~~~~~~~~~l~t~eeR~~~l~~~-gVD~~~~~~F~ 93 (305)
T PRK05627 15 CVLTIGNFDGVHRGHQALLARAREIARERGLPSVVMTFEPHPREVFAPDKAPARLTPLRDKAELLAEL-GVDYVLVLPFD 93 (305)
T ss_pred EEEEEeeCCcCCHHHHHHHHHHHHHHHhcCCCEEEEEecCCHHHHcCCCCCCcCCCCHHHHHHHHHHc-CCCEEEEecCC
Confidence 79999999999999999999999998642 444444442 1222333 799999999999999 6999887 65
Q ss_pred CC---CCHHHHHH-----hcCCCEEEEcCCCCCCc
Q psy11152 78 PY---VTTLETLD-----AYDCDFCVHGALEVLVS 104 (112)
Q Consensus 78 ~~---~~~~~fi~-----~l~~~~iv~G~D~~f~~ 104 (112)
++ +++++|++ +++++++|+|+||+||.
T Consensus 94 ~~~~~ls~e~Fi~~~l~~~l~~~~iVvG~Df~FG~ 128 (305)
T PRK05627 94 EEFAKLSAEEFIEDLLVKGLNAKHVVVGFDFRFGK 128 (305)
T ss_pred HHHhcCCHHHHHHHHHHhccCCCEEEECCCCCCCC
Confidence 33 68999985 38999999999999995
>TIGR00083 ribF riboflavin kinase/FMN adenylyltransferase
Back Show alignment and domain information
Probab=99.87 E-value=2.5e-22 Score=152.71 Aligned_cols=96 Identities=15% Similarity=0.159 Sum_probs=77.2
Q ss_pred EEEecccCcCCHHHHHHHHHHHHcCC-----eEEEEEecCccc--ccCCCCCCcCHHHHHHHHhhccCCCEEEE--cCCC
Q psy11152 9 TSLQSNYDMVHFGHANNLRQAKELGN-----YLVVGVHTDEEI--SKHKGPPVFTQQERYKMVRGIKWVDEVVE--GAPY 79 (112)
Q Consensus 9 v~~~G~FD~~H~GH~~ll~~a~~~~~-----~lvv~v~~d~~~--~~~k~~~i~s~~eR~~~l~~~~~vd~vi~--~~~~ 79 (112)
++++|+|||+|+|||+||++|++.|+ ..++++.+.|.. .+.+.+.+++.++|.++++++ |||.+++ |+++
T Consensus 1 ~vaiG~FDGvH~GHq~Li~~~~~~a~~~~~~~~V~tF~phP~~~~~~~~~~~l~~~~~k~~~l~~~-Gvd~~~~~~F~~~ 79 (288)
T TIGR00083 1 SLAIGYFDGLHLGHQALLQELKQIAEEKGLPPAVLLFEPHPSEQFNWLTAPALTPLEDKARQLQIK-GVEQLLVVVFDEE 79 (288)
T ss_pred CEEEEeCCccCHHHHHHHHHHHHHHHHhCCCEEEEEeCCChHHHhCccCCCCCCCHHHHHHHHHHc-CCCEEEEeCCCHH
Confidence 48999999999999999999998753 356677666642 222223599999999999999 8999887 6654
Q ss_pred ---CCHHHHHH-----hcCCCEEEEcCCCCCCcc
Q psy11152 80 ---VTTLETLD-----AYDCDFCVHGALEVLVSL 105 (112)
Q Consensus 80 ---~~~~~fi~-----~l~~~~iv~G~D~~f~~~ 105 (112)
++|++|++ +++++.||+|+||+||..
T Consensus 80 ~a~ls~e~Fi~~~l~~~l~~~~ivvG~Df~FG~~ 113 (288)
T TIGR00083 80 FANLSALQFIDQLIVKHLHVKFLVVGDDFRFGHD 113 (288)
T ss_pred HHcCCHHHHHHHHHHhccCCcEEEECCCccCCCC
Confidence 79999973 479999999999999953
multifunctional enzyme: riboflavin kinase (EC 2.7.1.26) (flavokinase) / FMN adenylyltransferase (EC 2.7.7.2) (FAD pyrophosphorylase) (FAD synthetase).
>COG0196 RibF FAD synthase [Coenzyme metabolism]
Back Show alignment and domain information
Probab=99.86 E-value=1.1e-21 Score=149.99 Aligned_cols=99 Identities=21% Similarity=0.207 Sum_probs=80.2
Q ss_pred ceEEEEecccCcCCHHHHHHHHHHHHcCCe-----EEEEEecCcc--cccCCCC-CCcCHHHHHHHHhhccCCCEEEE--
Q psy11152 6 LLATSLQSNYDMVHFGHANNLRQAKELGNY-----LVVGVHTDEE--ISKHKGP-PVFTQQERYKMVRGIKWVDEVVE-- 75 (112)
Q Consensus 6 ~~~v~~~G~FD~~H~GH~~ll~~a~~~~~~-----lvv~v~~d~~--~~~~k~~-~i~s~~eR~~~l~~~~~vd~vi~-- 75 (112)
..+++++|+|||+|+|||++|++|++.++. +++++.+.|. ..+.+.+ .+++.++|+++++.+ |||.+++
T Consensus 15 ~~~~l~IG~FDGvHlGHq~ll~~a~~~a~~~~~~~~VitF~p~P~~~~~~~~~~~~Lt~~~~k~~~l~~~-gvd~~~v~~ 93 (304)
T COG0196 15 RGCVLTIGNFDGVHLGHQKLLAQALEAAEKRGLPVVVITFEPHPRELLKPDKPPTRLTPLREKIRLLAGY-GVDALVVLD 93 (304)
T ss_pred CCcEEEEEcCCccchhHHHHHHHHHHHHHHhCCceEEEEecCCCHHHcCCCCCccccCCHHHHHHHHHhc-CCcEEEEEe
Confidence 468999999999999999999999987632 4555555553 2222223 599999999999999 7999887
Q ss_pred cCCC---CCHHHHHH----hcCCCEEEEcCCCCCCcc
Q psy11152 76 GAPY---VTTLETLD----AYDCDFCVHGALEVLVSL 105 (112)
Q Consensus 76 ~~~~---~~~~~fi~----~l~~~~iv~G~D~~f~~~ 105 (112)
|+.. .++++|+. +++++.+|+|+||+||+.
T Consensus 94 F~~~fa~ls~~~Fv~~lv~~l~~k~ivvG~DF~FGk~ 130 (304)
T COG0196 94 FDLEFANLSAEEFVELLVEKLNVKHIVVGFDFRFGKG 130 (304)
T ss_pred CCHhHhhCCHHHHHHHHHhccCCcEEEEecccccCCC
Confidence 7654 78999975 899999999999999975
>PRK11316 bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase; Provisional
Back Show alignment and domain information
Probab=99.86 E-value=5.5e-21 Score=152.26 Aligned_cols=101 Identities=25% Similarity=0.326 Sum_probs=90.7
Q ss_pred CceEEEEecccCcCCHHHHHHHHHHHHcCCeEEEEEecCcccccCCC--CCCcCHHHHHHHHhhccCCCEEEEcCCCCCH
Q psy11152 5 NLLATSLQSNYDMVHFGHANNLRQAKELGNYLVVGVHTDEEISKHKG--PPVFTQQERYKMVRGIKWVDEVVEGAPYVTT 82 (112)
Q Consensus 5 ~~~~v~~~G~FD~~H~GH~~ll~~a~~~~~~lvv~v~~d~~~~~~k~--~~i~s~~eR~~~l~~~~~vd~vi~~~~~~~~ 82 (112)
+.++|++.|+||++|.||+++|++|++.++.++|++++|+.....|+ .|+++.++|.+.++++++||+++.+++ .++
T Consensus 339 ~~~iv~~~G~fD~~H~GH~~~l~~a~~~~~~l~v~v~~d~~~~~~k~~~~pi~~~~~R~~~~~~~~~vd~v~~~~~-~~~ 417 (473)
T PRK11316 339 GEKIVMTNGCFDILHAGHVSYLANARKLGDRLIVAVNSDASVKRLKGEGRPVNPLEQRMAVLAALEAVDWVVPFEE-DTP 417 (473)
T ss_pred CCeEEEEecccccCCHHHHHHHHHHHHhCCeeEEEEeCchhHHHhCCCCCCCCCHHHHHHHHHhcCcCCEEEeCCC-CCH
Confidence 35789999999999999999999999999999999999987654454 489999999999999988999998874 589
Q ss_pred HHHHHhcCCCEEEEcCCCCCCccc
Q psy11152 83 LETLDAYDCDFCVHGALEVLVSLE 106 (112)
Q Consensus 83 ~~fi~~l~~~~iv~G~D~~f~~~~ 106 (112)
++|++++++|++++|.||+|...+
T Consensus 418 ~~~~~~~~~d~vv~G~d~~~~~~~ 441 (473)
T PRK11316 418 QRLIAEILPDLLVKGGDYKPEEIA 441 (473)
T ss_pred HHHHHHhCCCEEEECCCCCCCccc
Confidence 999999999999999999988654
>COG2870 RfaE ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell envelope biogenesis, outer membrane]
Back Show alignment and domain information
Probab=99.82 E-value=4.6e-20 Score=144.57 Aligned_cols=102 Identities=27% Similarity=0.402 Sum_probs=94.5
Q ss_pred ceEEEEecccCcCCHHHHHHHHHHHHcCCeEEEEEecCcccccCCCC--CCcCHHHHHHHHhhccCCCEEEEcCCCCCHH
Q psy11152 6 LLATSLQSNYDMVHFGHANNLRQAKELGNYLVVGVHTDEEISKHKGP--PVFTQQERYKMVRGIKWVDEVVEGAPYVTTL 83 (112)
Q Consensus 6 ~~~v~~~G~FD~~H~GH~~ll~~a~~~~~~lvv~v~~d~~~~~~k~~--~i~s~~eR~~~l~~~~~vd~vi~~~~~~~~~ 83 (112)
.++|++-|+||.+|.||..+|.+|+++|+.|+||+++|.+..+.||. |+.+.+.|...+.++..||+|++|++ ++|+
T Consensus 332 ~~vvfTNGcFDIlH~GHvsyL~~Ar~lgd~Livg~NsDaSvkrLKG~~RPin~~~~Ra~vLa~L~~VD~vV~F~e-dTP~ 410 (467)
T COG2870 332 KKVVFTNGCFDILHAGHVTYLAQARALGDRLIVGVNSDASVKRLKGESRPINSEEDRAAVLAALESVDLVVIFDE-DTPE 410 (467)
T ss_pred CeEEEecchhhhccccHHHHHHHHHhhCCeEEEEeccchhhhhhcCCCCCCCcHHHHHHHHhhcccceEEEEecC-CCHH
Confidence 35899999999999999999999999999999999999988776765 99999999999999999999999985 7899
Q ss_pred HHHHhcCCCEEEEcCCCCCCccccc
Q psy11152 84 ETLDAYDCDFCVHGALEVLVSLESS 108 (112)
Q Consensus 84 ~fi~~l~~~~iv~G~D~~f~~~~~~ 108 (112)
+.|+.++||.+|.|.||+-..++++
T Consensus 411 ~LI~~~~PdilVKGgDy~~~~i~g~ 435 (467)
T COG2870 411 ELIEAVKPDILVKGGDYKIEKIVGA 435 (467)
T ss_pred HHHHHhCcceEEccCCCChhhccch
Confidence 9999999999999999998877764
>KOG2803|consensus
Back Show alignment and domain information
Probab=99.81 E-value=1.6e-19 Score=137.42 Aligned_cols=101 Identities=38% Similarity=0.570 Sum_probs=91.9
Q ss_pred ceEEEEecccCcCCHHHHHHHHHHHHcCCeEEEEEecCcccccCCCC--CCcCHHHHHHHHhhccCCCEEEEcCCCCCHH
Q psy11152 6 LLATSLQSNYDMVHFGHANNLRQAKELGNYLVVGVHTDEEISKHKGP--PVFTQQERYKMVRGIKWVDEVVEGAPYVTTL 83 (112)
Q Consensus 6 ~~~v~~~G~FD~~H~GH~~ll~~a~~~~~~lvv~v~~d~~~~~~k~~--~i~s~~eR~~~l~~~~~vd~vi~~~~~~~~~ 83 (112)
.++|++.|.||+||.||+..|++|+++++.|+||++.|+..+.+++. |++++.||...+.+|++||+|++..|+....
T Consensus 198 ~kvVYvdGaFDLFH~GHl~~Le~ak~lgdyLIvGI~~D~~vneykgs~~PiMnl~ER~LsvlackyVdeVvvGaP~~v~s 277 (358)
T KOG2803|consen 198 DKVVYVDGAFDLFHAGHLDFLEKAKRLGDYLIVGIHTDQTVNEYKGSNYPIMNLHERVLSVLACKYVDEVVVGAPYEVTS 277 (358)
T ss_pred CcEEEEcCchhhhccchHHHHHHHHhccCceEEEeecCcchhhhccCCCccchHHHHHHHHhhhcccceEEEcCchhccH
Confidence 57899999999999999999999999999999999999988877765 9999999999999999999999988887778
Q ss_pred HHHHhcCCCEEEEcC--CCCCCccc
Q psy11152 84 ETLDAYDCDFCVHGA--LEVLVSLE 106 (112)
Q Consensus 84 ~fi~~l~~~~iv~G~--D~~f~~~~ 106 (112)
+|++.++++.++.|. +++=.+.|
T Consensus 278 ~~i~~~~~~~v~~g~~~~~~~~~~p 302 (358)
T KOG2803|consen 278 EFIKLFNIDKVAHGTIPDFRDPSDP 302 (358)
T ss_pred HHHHhcCceEEEEeccccccCccCc
Confidence 999999999999999 55544443
>KOG2804|consensus
Back Show alignment and domain information
Probab=99.78 E-value=2.9e-19 Score=135.38 Aligned_cols=99 Identities=40% Similarity=0.602 Sum_probs=90.1
Q ss_pred ceEEEEecccCcCCHHHHHHHHHHHHcCC--eEEEEEecCcccccCCCCCCcCHHHHHHHHhhccCCCEEEEcCCCCCHH
Q psy11152 6 LLATSLQSNYDMVHFGHANNLRQAKELGN--YLVVGVHTDEEISKHKGPPVFTQQERYKMVRGIKWVDEVVEGAPYVTTL 83 (112)
Q Consensus 6 ~~~v~~~G~FD~~H~GH~~ll~~a~~~~~--~lvv~v~~d~~~~~~k~~~i~s~~eR~~~l~~~~~vd~vi~~~~~~~~~ 83 (112)
.-+|++.|.||+||.||...|+||+...- +|+||+++|....+.||.++++.+||++.|++|++||+||...||..+.
T Consensus 63 PVRVYADGIyDLFH~GHarqL~QaK~~FPNvyLiVGvc~De~Thk~KG~TVm~e~ERyE~lrHCryVDEVi~~APW~lt~ 142 (348)
T KOG2804|consen 63 PVRVYADGIYDLFHYGHARQLEQAKKLFPNVYLIVGVCSDELTHKFKGRTVMNENERYEALRHCRYVDEVIPNAPWTLTP 142 (348)
T ss_pred ceEEEccchHHHhhhhHHHHHHHHHHhCCCeEEEEeecCchhhhhccCceecChHHHHHHhhhhhhhhhhccCCCccccH
Confidence 34799999999999999999999999974 6999999999877889999999999999999999999999999997788
Q ss_pred HHHHhcCCCEEEEcCCCCCCcc
Q psy11152 84 ETLDAYDCDFCVHGALEVLVSL 105 (112)
Q Consensus 84 ~fi~~l~~~~iv~G~D~~f~~~ 105 (112)
+|+.++++|+|.+ +|-.|.+.
T Consensus 143 EFL~~HKIDfVAH-DdIPY~s~ 163 (348)
T KOG2804|consen 143 EFLEKHKIDFVAH-DDIPYVSA 163 (348)
T ss_pred HHHHhcccceeec-cCccccCC
Confidence 9999999999998 77777643
>cd02039 cytidylyltransferase_like Cytidylyltransferase-like domain
Back Show alignment and domain information
Probab=99.76 E-value=7.2e-18 Score=113.78 Aligned_cols=96 Identities=18% Similarity=0.165 Sum_probs=74.1
Q ss_pred EEEEecccCcCCHHHHHHHHHHHHcC-CeEEEEEecCcccccCCCCCCcCHHHHHHHHhhccC-CCEEEEcCCC----CC
Q psy11152 8 ATSLQSNYDMVHFGHANNLRQAKELG-NYLVVGVHTDEEISKHKGPPVFTQQERYKMVRGIKW-VDEVVEGAPY----VT 81 (112)
Q Consensus 8 ~v~~~G~FD~~H~GH~~ll~~a~~~~-~~lvv~v~~d~~~~~~k~~~i~s~~eR~~~l~~~~~-vd~vi~~~~~----~~ 81 (112)
+++++|+|||+|.||+.++++|++.+ +.++|.+.+++.... +...+++.++|+++++++.. ++.++..+.. ..
T Consensus 1 ~~~~~G~Fdp~H~GH~~ll~~a~~~~~~~~~v~~~~~~~~~~-~~~~~~~~~~R~~~l~~~~~~~~~v~~~~~~~~~~~~ 79 (143)
T cd02039 1 VGIIIGRFEPFHLGHLKLIKEALEEALDEVIIIIVSNPPKKK-RNKDPFSLHERVEMLKEILKDRLKVVPVDFPEVKILL 79 (143)
T ss_pred CeEEeeccCCcCHHHHHHHHHHHHHcCCceEEEEcCCChhhc-ccccCCCHHHHHHHHHHhccCCcEEEEEecChhhccC
Confidence 47899999999999999999999999 888888877654321 12368999999999999942 7787763211 22
Q ss_pred HHHH----HHhcCCCEEEEcCCCCCCc
Q psy11152 82 TLET----LDAYDCDFCVHGALEVLVS 104 (112)
Q Consensus 82 ~~~f----i~~l~~~~iv~G~D~~f~~ 104 (112)
+.+| +..++++++++|.||.|+-
T Consensus 80 ~~~~~~~~~~~~~~~~~v~G~d~~~~~ 106 (143)
T cd02039 80 AVVFILKILLKVGPDKVVVGEDFAFGK 106 (143)
T ss_pred HHHHHHHHHHHcCCcEEEECCccccCC
Confidence 3323 3568999999999999985
Cytidylyltransferase-like domain. Many of these proteins are known to use CTP or ATP and release pyrophosphate. Protein families that contain at least one copy of this domain include citrate lyase ligase, pantoate-beta-alanine ligase, glycerol-3-phosphate cytidyltransferase, ADP-heptose synthase, phosphocholine cytidylyltransferase, lipopolysaccharide core biosynthesis protein KdtB, the bifunctional protein NadR, and a number whose function is unknown.
>PRK00168 coaD phosphopantetheine adenylyltransferase; Provisional
Back Show alignment and domain information
Probab=99.70 E-value=2.2e-16 Score=110.77 Aligned_cols=87 Identities=18% Similarity=0.269 Sum_probs=73.3
Q ss_pred ceEEEEecccCcCCHHHHHHHHHHHHcCCeEEEEEecCcccccCCCCCCcCHHHHHHHHhh-ccCCCEEEEcCCCCCHHH
Q psy11152 6 LLATSLQSNYDMVHFGHANNLRQAKELGNYLVVGVHTDEEISKHKGPPVFTQQERYKMVRG-IKWVDEVVEGAPYVTTLE 84 (112)
Q Consensus 6 ~~~v~~~G~FD~~H~GH~~ll~~a~~~~~~lvv~v~~d~~~~~~k~~~i~s~~eR~~~l~~-~~~vd~vi~~~~~~~~~~ 84 (112)
|+++++.|+|||+|.||+.++++|++.+++++++++.++ .| .++.|.++|+++++. +++++.+.+.+-+..+.+
T Consensus 1 ~~igi~gGsFdP~H~GHl~~~~~a~~~~d~v~v~~~~~~----~k-~~~~~~~~R~~ml~~a~~~~~~v~v~~~e~~t~~ 75 (159)
T PRK00168 1 MKIAIYPGSFDPITNGHLDIIERASRLFDEVIVAVAINP----SK-KPLFSLEERVELIREATAHLPNVEVVSFDGLLVD 75 (159)
T ss_pred CcEEEEeeecCCCCHHHHHHHHHHHHHCCEEEEEECCCC----CC-CCCCCHHHHHHHHHHHHcCCCCEEEecCCccHHH
Confidence 358999999999999999999999999999999887654 23 368999999999987 777888776432334778
Q ss_pred HHHhcCCCEEEEc
Q psy11152 85 TLDAYDCDFCVHG 97 (112)
Q Consensus 85 fi~~l~~~~iv~G 97 (112)
+++.+++++++.|
T Consensus 76 ~~~~~~~~~~~~g 88 (159)
T PRK00168 76 FAREVGATVIVRG 88 (159)
T ss_pred HHHHcCCCEEEec
Confidence 8999999999999
>TIGR00125 cyt_tran_rel cytidyltransferase-related domain
Back Show alignment and domain information
Probab=99.69 E-value=1e-16 Score=96.43 Aligned_cols=64 Identities=39% Similarity=0.672 Sum_probs=54.6
Q ss_pred EEEEecccCcCCHHHHHHHHHHHHcCCeEEEEEecCcccccCCCCCCcCHHHHHHHHhhccCCC
Q psy11152 8 ATSLQSNYDMVHFGHANNLRQAKELGNYLVVGVHTDEEISKHKGPPVFTQQERYKMVRGIKWVD 71 (112)
Q Consensus 8 ~v~~~G~FD~~H~GH~~ll~~a~~~~~~lvv~v~~d~~~~~~k~~~i~s~~eR~~~l~~~~~vd 71 (112)
++++.|+|||+|.||+.++++|++.++.+++++.+++..++.+..++++.++|.++++++..++
T Consensus 1 i~~~~G~Fdp~H~GH~~~l~~a~~~~~~~vv~i~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~ 64 (66)
T TIGR00125 1 RVIFVGTFDPFHLGHLDLLERAKELFDELIVGVGSDQFVNPLKGEPVFSLEERLEMLKALKYVD 64 (66)
T ss_pred CEEEcCccCCCCHHHHHHHHHHHHhCCEEEEEECchHhccccCCCCCCCHHHHHHHHHHhcccc
Confidence 4789999999999999999999999998888888876655544448999999999999986543
Protein families that contain at least one copy of this domain include citrate lyase ligase, pantoate-beta-alanine ligase, glycerol-3-phosphate cytidyltransferase, ADP-heptose synthase, phosphocholine cytidylyltransferase, lipopolysaccharide core biosynthesis protein KdtB, the bifunctional protein NadR, and a number whose function is unknown. Many of these proteins are known to use CTP or ATP and release pyrophosphate.
>COG0669 CoaD Phosphopantetheine adenylyltransferase [Coenzyme metabolism]
Back Show alignment and domain information
Probab=99.69 E-value=2.7e-16 Score=109.72 Aligned_cols=85 Identities=20% Similarity=0.323 Sum_probs=72.8
Q ss_pred ceEEEEecccCcCCHHHHHHHHHHHHcCCeEEEEEecCcccccCCCCCCcCHHHHHHHHhhc-cCCCEEEE--cCCCCCH
Q psy11152 6 LLATSLQSNYDMVHFGHANNLRQAKELGNYLVVGVHTDEEISKHKGPPVFTQQERYKMVRGI-KWVDEVVE--GAPYVTT 82 (112)
Q Consensus 6 ~~~v~~~G~FD~~H~GH~~ll~~a~~~~~~lvv~v~~d~~~~~~k~~~i~s~~eR~~~l~~~-~~vd~vi~--~~~~~~~ 82 (112)
++++++.|+|||+++||+.+|++|.+++|+++|+|..+| .| .|++|.+||.+++++. +..++|-+ |+ ...
T Consensus 2 ~~iavypGSFDPiTnGHlDii~RA~~~Fd~viVaV~~np----~K-~plFsleER~~l~~~~~~~l~nV~V~~f~--~Ll 74 (159)
T COG0669 2 MKIAVYPGSFDPITNGHLDIIKRASALFDEVIVAVAINP----SK-KPLFSLEERVELIREATKHLPNVEVVGFS--GLL 74 (159)
T ss_pred CeeEEeCCCCCCCccchHHHHHHHHHhccEEEEEEEeCC----Cc-CCCcCHHHHHHHHHHHhcCCCceEEEecc--cHH
Confidence 578999999999999999999999999999999998776 23 4799999999999764 45666544 65 367
Q ss_pred HHHHHhcCCCEEEEc
Q psy11152 83 LETLDAYDCDFCVHG 97 (112)
Q Consensus 83 ~~fi~~l~~~~iv~G 97 (112)
.+|.++.++..+|.|
T Consensus 75 vd~ak~~~a~~ivRG 89 (159)
T COG0669 75 VDYAKKLGATVLVRG 89 (159)
T ss_pred HHHHHHcCCCEEEEe
Confidence 889999999999998
>PRK00777 phosphopantetheine adenylyltransferase; Provisional
Back Show alignment and domain information
Probab=99.68 E-value=7.2e-17 Score=112.91 Aligned_cols=89 Identities=27% Similarity=0.340 Sum_probs=67.8
Q ss_pred eEEEEecccCcCCHHHHHHHHHHHHcCCeEEEEEecCcccccCCCCCCcCHHHHHHHHhhccCCCEEEE---------cC
Q psy11152 7 LATSLQSNYDMVHFGHANNLRQAKELGNYLVVGVHTDEEISKHKGPPVFTQQERYKMVRGIKWVDEVVE---------GA 77 (112)
Q Consensus 7 ~~v~~~G~FD~~H~GH~~ll~~a~~~~~~lvv~v~~d~~~~~~k~~~i~s~~eR~~~l~~~~~vd~vi~---------~~ 77 (112)
++|++.|+||++|.||+.+|++|.+.+++++|++++++..++.|+.+++|.++|.++++.+ ++.+.. .|
T Consensus 2 ~~v~~gGtFDplH~GH~~ll~~A~~~~d~livgi~~d~~~~~~K~~~i~~~e~R~~~v~~~--~~~~~~~~~~~i~~i~d 79 (153)
T PRK00777 2 MKVAVGGTFDPLHDGHRALLRKAFELGKRVTIGLTSDEFAKSYKKHKVRPYEVRLKNLKKF--LKAVEYDREYEIVKIDD 79 (153)
T ss_pred cEEEEecccCCCCHHHHHHHHHHHHcCCEEEEEEcCCccccccCCCCCCCHHHHHHHHHHH--HHhcCCCCcEEEEeccc
Confidence 5799999999999999999999999999999999999876554545899999999999854 332211 12
Q ss_pred CCCCHHHHHHhcCCCEEEEcCCCC
Q psy11152 78 PYVTTLETLDAYDCDFCVHGALEV 101 (112)
Q Consensus 78 ~~~~~~~fi~~l~~~~iv~G~D~~ 101 (112)
++.++ + ..++|++|+|.|-.
T Consensus 80 ~~gp~---~-~~~~d~ivvs~et~ 99 (153)
T PRK00777 80 PYGPA---L-EDDFDAIVVSPETY 99 (153)
T ss_pred cCCCc---c-ccCCCEEEEChhhh
Confidence 21111 1 23699999999843
>PRK13964 coaD phosphopantetheine adenylyltransferase; Provisional
Back Show alignment and domain information
Probab=99.65 E-value=2e-15 Score=104.38 Aligned_cols=85 Identities=22% Similarity=0.235 Sum_probs=67.9
Q ss_pred eEEEEecccCcCCHHHHHHHHHHHHcCCeEEEEEecCcccccCCCCCCcCHHHHHHHHhhc-cCCCEEEE--cCCCCCHH
Q psy11152 7 LATSLQSNYDMVHFGHANNLRQAKELGNYLVVGVHTDEEISKHKGPPVFTQQERYKMVRGI-KWVDEVVE--GAPYVTTL 83 (112)
Q Consensus 7 ~~v~~~G~FD~~H~GH~~ll~~a~~~~~~lvv~v~~d~~~~~~k~~~i~s~~eR~~~l~~~-~~vd~vi~--~~~~~~~~ 83 (112)
+++++.|+|||+|.||+.++++|.+.+++++|++..+| .|. +++|.++|+++++.. +..+.+-+ +.. ....
T Consensus 2 kiai~~GSFDPih~GHl~ii~~A~~~~D~v~v~v~~np----~K~-~~~s~e~R~~~l~~~~~~~~~v~v~~~~~-~l~v 75 (140)
T PRK13964 2 KIAIYPGSFDPFHKGHLNILKKALKLFDKVYVVVSINP----DKS-NASDLDSRFKNVKNKLKDFKNVEVLINEN-KLTA 75 (140)
T ss_pred eEEEEeeeeCCCCHHHHHHHHHHHHhCCEEEEEeccCC----CCC-CCCCHHHHHHHHHHHHcCCCCcEEecCcC-CcHH
Confidence 58999999999999999999999999999999888764 232 678999999999643 44444333 211 3456
Q ss_pred HHHHhcCCCEEEEc
Q psy11152 84 ETLDAYDCDFCVHG 97 (112)
Q Consensus 84 ~fi~~l~~~~iv~G 97 (112)
+|.++.+++++|.|
T Consensus 76 ~~~~~~~a~~ivrG 89 (140)
T PRK13964 76 EIAKKLGANFLIRS 89 (140)
T ss_pred HHHHHCCCeEEEEe
Confidence 79999999999999
>cd02163 PPAT Phosphopantetheine adenylyltransferase
Back Show alignment and domain information
Probab=99.63 E-value=5.1e-15 Score=103.25 Aligned_cols=85 Identities=20% Similarity=0.309 Sum_probs=70.4
Q ss_pred EEEEecccCcCCHHHHHHHHHHHHcCCeEEEEEecCcccccCCCCCCcCHHHHHHHHhh-ccCCCEEEEcCCCCCHHHHH
Q psy11152 8 ATSLQSNYDMVHFGHANNLRQAKELGNYLVVGVHTDEEISKHKGPPVFTQQERYKMVRG-IKWVDEVVEGAPYVTTLETL 86 (112)
Q Consensus 8 ~v~~~G~FD~~H~GH~~ll~~a~~~~~~lvv~v~~d~~~~~~k~~~i~s~~eR~~~l~~-~~~vd~vi~~~~~~~~~~fi 86 (112)
+++++|+|||+|.||+.++++|.+.+++++++++.++ .| .+..+.++|++|++. +++++.+.+.+-+..+.+++
T Consensus 1 i~i~gGsFdP~H~GHl~l~~~a~~~~d~v~v~~~~~~----~k-~~~~~~~~R~~ml~~a~~~~~~~~v~~~es~t~~~l 75 (153)
T cd02163 1 IAVYPGSFDPITNGHLDIIERASKLFDEVIVAVAVNP----SK-KPLFSLEERVELIREATKHLPNVEVDGFDGLLVDFA 75 (153)
T ss_pred CEEEEeccCCCCHHHHHHHHHHHHHCCEEEEEEcCCC----CC-CCCCCHHHHHHHHHHHHcCCCCEEecCCcchHHHHH
Confidence 3689999999999999999999999999999887654 23 367899999999986 67777776643223467889
Q ss_pred HhcCCCEEEEc
Q psy11152 87 DAYDCDFCVHG 97 (112)
Q Consensus 87 ~~l~~~~iv~G 97 (112)
+.++.+++++|
T Consensus 76 ~~l~~~~~i~G 86 (153)
T cd02163 76 RKHGANVIVRG 86 (153)
T ss_pred HHcCCCEEEEC
Confidence 99999999999
Phosphopantetheine adenylyltransferase (PPAT). PPAT is an essential enzyme in bacteria, responsible for catalyzing the rate-limiting step in coenzyme A (CoA) biosynthesis. The dinucleotide-binding fold of PPAT is homologous to class I aminoacyl-tRNA synthetases. CoA has been shown to inhibit PPAT and competes with ATP, PhP, and dPCoA. PPAT is a homohexamer in E. coli.
>cd02169 Citrate_lyase_ligase Citrate lyase ligase
Back Show alignment and domain information
Probab=99.59 E-value=2.5e-14 Score=109.38 Aligned_cols=93 Identities=16% Similarity=0.186 Sum_probs=71.7
Q ss_pred ceEEEEecccCcCCHHHHHHHHHHHHcCCeEEEEEecCcccccCCCCCCcCHHHHHHHHhhc-cCCCEEEE--cCC----
Q psy11152 6 LLATSLQSNYDMVHFGHANNLRQAKELGNYLVVGVHTDEEISKHKGPPVFTQQERYKMVRGI-KWVDEVVE--GAP---- 78 (112)
Q Consensus 6 ~~~v~~~G~FD~~H~GH~~ll~~a~~~~~~lvv~v~~d~~~~~~k~~~i~s~~eR~~~l~~~-~~vd~vi~--~~~---- 78 (112)
.+++.+.|+|||+|.||+.++++|.+.++.++|.+.+. + .+.+|.++|+++++.. ++.+.+.+ ++.
T Consensus 114 ~~~~~~~~~FDPiH~GHl~ii~~a~~~~d~~~V~i~~~------~-~~~~~~e~R~~ml~~ai~~~~~v~v~~~~~l~v~ 186 (297)
T cd02169 114 KKIAAIVMNANPFTLGHRYLVEKAAAENDWVHLFVVSE------D-KSLFSFADRFKLVKKGTKHLKNVTVHSGGDYIIS 186 (297)
T ss_pred CceEEEEecCCCCchHHHHHHHHHHhhCCeEEEEEEcC------C-CCCCCHHHHHHHHHHHhCCCCCEEEEecCCeeec
Confidence 47889999999999999999999999999877776543 1 2568999999999865 33332221 111
Q ss_pred ------C--------------CCHHHHH----HhcCCCEEEEcCCCCCCcc
Q psy11152 79 ------Y--------------VTTLETL----DAYDCDFCVHGALEVLVSL 105 (112)
Q Consensus 79 ------~--------------~~~~~fi----~~l~~~~iv~G~D~~f~~~ 105 (112)
+ +++++|+ ++++++.+++|+||+||..
T Consensus 187 ~~~~~~~~~~~~~~~~~~~a~lsa~~Fi~iL~~~l~~~~ivvG~Df~FG~~ 237 (297)
T cd02169 187 SATFPSYFIKEQDVVIKAQTALDARIFRKYIAPALNITKRYVGEEPFSRVT 237 (297)
T ss_pred cccChhhhcCChhHHHHHHhcCCHHHHHHHHHHHcCCcEEEEcCCCCCCCc
Confidence 0 4788886 4689999999999999963
Citrate lyase ligase, also known as [Citrate (pro-3S)-lyase] ligase, is responsible for acetylation of the (2-(5''-phosphoribosyl)-3'-dephosphocoenzyme-A) prosthetic group of the gamma subunit of citrate lyase, converting the inactive thiol form of this enzyme to the active form. The acetylation of 1 molecule of deacetyl-citrate lyase to enzymatically active citrate lyase requires 6 molecules of ATP. The Adenylylyltranferase activity of the enzyme involves the formation of AMP and and pyrophosphate in the acetylation reaction.
>PLN02388 phosphopantetheine adenylyltransferase
Back Show alignment and domain information
Probab=99.58 E-value=4.8e-15 Score=105.91 Aligned_cols=62 Identities=29% Similarity=0.330 Sum_probs=53.1
Q ss_pred ceEEEEecccCcCCHHHHHHHHHHHHcCC-eEEEEEecCcccccCCCC-CCcCHHHHHHHHhhc
Q psy11152 6 LLATSLQSNYDMVHFGHANNLRQAKELGN-YLVVGVHTDEEISKHKGP-PVFTQQERYKMVRGI 67 (112)
Q Consensus 6 ~~~v~~~G~FD~~H~GH~~ll~~a~~~~~-~lvv~v~~d~~~~~~k~~-~i~s~~eR~~~l~~~ 67 (112)
.+.|+++|+||++|.||+.||++|.+.++ .+++|+++++...+.+.+ .+.|+++|.+.++++
T Consensus 19 ~~~Vv~gGtFDgLH~GHq~LL~~A~~~a~~~vvIgft~~p~l~~k~~~~~I~~~e~R~~~l~~f 82 (177)
T PLN02388 19 YGAVVLGGTFDRLHDGHRLFLKAAAELARDRIVIGVCDGPMLSKKQFAELIQPIEERMHNVEEY 82 (177)
T ss_pred CCeEEEEecCCccCHHHHHHHHHHHHhhhcCEEEecCCChhhcccCCCcccCCHHHHHHHHHHH
Confidence 46899999999999999999999999984 799999999976433323 799999999999875
>PRK01170 phosphopantetheine adenylyltransferase/unknown domain fusion protein; Provisional
Back Show alignment and domain information
Probab=99.56 E-value=1.3e-14 Score=111.90 Aligned_cols=92 Identities=24% Similarity=0.346 Sum_probs=69.8
Q ss_pred EEEEecccCcCCHHHHHHHHHHHHcCCeEEEEEecCcccccCCCCCCcCHHHHHHHHhhc--cCCCEEEE---cCCCCCH
Q psy11152 8 ATSLQSNYDMVHFGHANNLRQAKELGNYLVVGVHTDEEISKHKGPPVFTQQERYKMVRGI--KWVDEVVE---GAPYVTT 82 (112)
Q Consensus 8 ~v~~~G~FD~~H~GH~~ll~~a~~~~~~lvv~v~~d~~~~~~k~~~i~s~~eR~~~l~~~--~~vd~vi~---~~~~~~~ 82 (112)
+|++.|+||.+|.||..+|++|.+.++.|+|++++|+.+.++|..+ .|+++|.++++++ +.++.+.+ .|++-++
T Consensus 2 ~V~vgGTFD~lH~GH~~lL~~A~~~gd~LiVgvt~D~~~~~~k~~~-~~~e~R~~~v~~fl~~~~~~~~i~~i~D~~Gpt 80 (322)
T PRK01170 2 ITVVGGTFSKLHKGHKALLKKAIETGDEVVIGLTSDEYVRKNKVYP-IPYEDRKRKLENFIKKFTNKFRIRPIDDRYGNT 80 (322)
T ss_pred EEEEccccccCChHHHHHHHHHHHcCCEEEEEEccHHHHHhcCCCC-CCHHHHHHHHHHHHHhcCCcEEEEecCCCCCCC
Confidence 6899999999999999999999999999999999999876545446 9999999999984 44554333 2332211
Q ss_pred HHHHHhcCCCEEEEcCCCCCC
Q psy11152 83 LETLDAYDCDFCVHGALEVLV 103 (112)
Q Consensus 83 ~~fi~~l~~~~iv~G~D~~f~ 103 (112)
+..-++|.||+|.|-.++
T Consensus 81 ---~~~~~~d~IVVS~ET~~~ 98 (322)
T PRK01170 81 ---LYEEDYEIIVVSPETYQR 98 (322)
T ss_pred ---cccCCCCEEEEecccccc
Confidence 234567888887776544
>TIGR01510 coaD_prev_kdtB pantetheine-phosphate adenylyltransferase, bacterial
Back Show alignment and domain information
Probab=99.55 E-value=6.4e-14 Score=97.85 Aligned_cols=85 Identities=21% Similarity=0.334 Sum_probs=65.7
Q ss_pred EEEEecccCcCCHHHHHHHHHHHHcCCeEEEEEecCcccccCCCCCCcCHHHHHHHHhhc-cCCCEEEEcCCCCCHHHHH
Q psy11152 8 ATSLQSNYDMVHFGHANNLRQAKELGNYLVVGVHTDEEISKHKGPPVFTQQERYKMVRGI-KWVDEVVEGAPYVTTLETL 86 (112)
Q Consensus 8 ~v~~~G~FD~~H~GH~~ll~~a~~~~~~lvv~v~~d~~~~~~k~~~i~s~~eR~~~l~~~-~~vd~vi~~~~~~~~~~fi 86 (112)
++++.|+|||+|.||+.++++|.+.+|+++++++.+| .| .+..+.++|++|++.+ .+.+.+.+.+-+..+.+.+
T Consensus 1 i~l~gGsFdP~H~GHl~l~~~a~~~~d~v~~~~~~~p----~k-~~~~~~~~R~~m~~~a~~~~~~~~v~~~e~yt~dt~ 75 (155)
T TIGR01510 1 IALYPGSFDPVTNGHLDIIKRAAALFDEVIVAVAKNP----SK-KPLFSLEERVELIKDATKHLPNVRVDVFDGLLVDYA 75 (155)
T ss_pred CEEEEeecCCCcHHHHHHHHHHHHhCCEEEEEEcCCC----CC-CCCcCHHHHHHHHHHHHhhCCCeEEcCccchHHHHH
Confidence 4789999999999999999999999999998887443 23 2578999999999876 2333333322223466788
Q ss_pred HhcCCCEEEEc
Q psy11152 87 DAYDCDFCVHG 97 (112)
Q Consensus 87 ~~l~~~~iv~G 97 (112)
+.++.++++.|
T Consensus 76 ~~l~~~~~i~G 86 (155)
T TIGR01510 76 KELGATFIVRG 86 (155)
T ss_pred HHcCCCEEEec
Confidence 99999999999
This model describes pantetheine-phosphate adenylyltransferase, the penultimate enzyme of coenzyme A (CoA) biosynthesis in bacteria. It does not show any strong homology to eukaryotic enzymes of coenzyme A biosynthesis. This protein was previously designated KdtB and postulated (because of cytidyltransferase homology and proximity to kdtA) to be an enzyme of LPS biosynthesis, a cytidyltransferase for 3-deoxy-D-manno-2-octulosonic acid. However, no activity toward that compound was found with either CTP or ATP. The phylogenetic distribution of this enzyme is more consistent with coenzyme A biosynthesis than with LPS biosynthesis.
>cd02166 NMNAT_Archaea Nicotinamide/nicotinate mononucleotide adenylyltransferase, archaeal
Back Show alignment and domain information
Probab=99.53 E-value=1.1e-13 Score=97.47 Aligned_cols=91 Identities=18% Similarity=0.156 Sum_probs=63.3
Q ss_pred EEEecccCcCCHHHHHHHHHHHHcCCeEEEEEecCcccccCCCCCCcCHHHHHHHHh-hccCCC----EEEE--cCCCCC
Q psy11152 9 TSLQSNYDMVHFGHANNLRQAKELGNYLVVGVHTDEEISKHKGPPVFTQQERYKMVR-GIKWVD----EVVE--GAPYVT 81 (112)
Q Consensus 9 v~~~G~FD~~H~GH~~ll~~a~~~~~~lvv~v~~d~~~~~~k~~~i~s~~eR~~~l~-~~~~vd----~vi~--~~~~~~ 81 (112)
++++|+|||+|.||+.++++|++.++++++++.++.... +....++.++|++|++ .++..+ .+.+ .++...
T Consensus 2 ~v~~G~FdP~H~GHl~~i~~a~~~~d~l~v~v~s~~~~~--~~~~~~~~~~R~~mi~~~~~~~~~~~~~v~v~~~~d~~~ 79 (163)
T cd02166 2 ALFIGRFQPFHLGHLKVIKWILEEVDELIIGIGSAQESH--TLENPFTAGERVLMIRRALEEEGIDLSRYYIIPVPDIER 79 (163)
T ss_pred eEEeeccCCCCHHHHHHHHHHHHHCCEEEEEecCCCCCC--CCCCCCCHHHHHHHHHHHHHhcCCCcCeEEEEecCCCCc
Confidence 689999999999999999999999999999886643221 2124578899999998 455554 3333 322223
Q ss_pred HHHHHHh-----cCCCEEEEcCCCC
Q psy11152 82 TLETLDA-----YDCDFCVHGALEV 101 (112)
Q Consensus 82 ~~~fi~~-----l~~~~iv~G~D~~ 101 (112)
.+.+.+. -+.+.++.|.+|.
T Consensus 80 ~~~w~~~v~~~vp~~div~~g~~~~ 104 (163)
T cd02166 80 NSLWVSYVESLTPPFDVVYSGNPLV 104 (163)
T ss_pred hHHHHHHHHHHCCCCCEEEECchHH
Confidence 3334322 1578899997653
This family of archaeal proteins exhibits nicotinamide-nucleotide adenylyltransferase (NMNAT) activity utilizing the salvage pathway to synthesize NAD. In some cases, the enzyme was tested and found also to have the activity of nicotinate-nucleotide adenylyltransferase an enzyme of NAD de novo biosynthesis, although with a higher Km. In some archaeal species, a number of proteins which are uncharacterized with respect to activity, are also present.
>TIGR01527 arch_NMN_Atrans nicotinamide-nucleotide adenylyltransferase
Back Show alignment and domain information
Probab=99.53 E-value=1.1e-13 Score=97.93 Aligned_cols=89 Identities=19% Similarity=0.262 Sum_probs=61.4
Q ss_pred EEEEecccCcCCHHHHHHHHHHHHcCCeEEEEEecCcccccCCCCCCcCHHHHHHHHh-hccCCC-E---EEEcCCCCCH
Q psy11152 8 ATSLQSNYDMVHFGHANNLRQAKELGNYLVVGVHTDEEISKHKGPPVFTQQERYKMVR-GIKWVD-E---VVEGAPYVTT 82 (112)
Q Consensus 8 ~v~~~G~FD~~H~GH~~ll~~a~~~~~~lvv~v~~d~~~~~~k~~~i~s~~eR~~~l~-~~~~vd-~---vi~~~~~~~~ 82 (112)
+++++|+|||+|.||+.++++|++.+|++++++.++... .+....++.+||++|++ .++.++ . ++..++ ..-
T Consensus 1 rgl~~G~FdP~H~GHl~ii~~a~~~~D~lii~i~s~~~~--~k~~~p~~~~eR~~mi~~al~~~~~~~~~~vP~~d-~~~ 77 (165)
T TIGR01527 1 RGFYIGRFQPFHLGHLEVIKKIAEEVDELIIGIGSAQES--HTLENPFTAGERILMITQSLKEVGDLTYYIIPIED-IER 77 (165)
T ss_pred CeEEEeccCCCCHHHHHHHHHHHHHCCEEEEEEcCCCCC--CCCCCCCCHHHHHHHHHHHHhcCCCceEEEEecCC-ccH
Confidence 368899999999999999999999999999988776532 22234557799999994 556553 2 222321 122
Q ss_pred HHHHHhc------CCCEEEEcCC
Q psy11152 83 LETLDAY------DCDFCVHGAL 99 (112)
Q Consensus 83 ~~fi~~l------~~~~iv~G~D 99 (112)
.+....+ ++|.++.|..
T Consensus 78 ~~~w~~~v~~~~p~~D~vf~~~~ 100 (165)
T TIGR01527 78 NSIWVSYVESMTPPFDVVYSNNP 100 (165)
T ss_pred HHHHHHHHHHhCCCCCEEEECCH
Confidence 2223333 7899999853
In some archaeal species, a lower-scoring paralog, uncharacterized with respect to activity, is also present. These score between trusted and noise cutoffs.
>smart00764 Citrate_ly_lig Citrate lyase ligase C-terminal domain
Back Show alignment and domain information
Probab=99.52 E-value=1.6e-13 Score=98.47 Aligned_cols=87 Identities=17% Similarity=0.119 Sum_probs=65.8
Q ss_pred EecccCcCCHHHHHHHHHHHHcCCeEEEEEecCcccccCCCCCCcCHHHHHHHHhhc-cCCCEEEE--------------
Q psy11152 11 LQSNYDMVHFGHANNLRQAKELGNYLVVGVHTDEEISKHKGPPVFTQQERYKMVRGI-KWVDEVVE-------------- 75 (112)
Q Consensus 11 ~~G~FD~~H~GH~~ll~~a~~~~~~lvv~v~~d~~~~~~k~~~i~s~~eR~~~l~~~-~~vd~vi~-------------- 75 (112)
+.=+|||+|+||+.++++|.+.++.+.|.+.+. + .+.+|.++|++|++.. ++.+.+.+
T Consensus 4 ~~~~~DPiH~GHl~i~~~a~~~~d~~~V~v~p~------~-~~~~s~e~R~~Mi~~a~~~~~~v~v~~~~~~~v~~~~~~ 76 (182)
T smart00764 4 IVMNANPFTLGHRYLVEQAAAECDWVHLFVVSE------D-ASLFSFDERFALVKKGTKDLDNVTVHSGSDYIISRATFP 76 (182)
T ss_pred EEECCCCCCHHHHHHHHHHHHHCCceEEEEEeC------C-CCCCCHHHHHHHHHHHhccCCCEEEEecCCceeccccCh
Confidence 345899999999999999999998877777653 1 2467999999999864 43332221
Q ss_pred --cCCC----------CCHHHHHH----hcCCCEEEEcCCCCCCc
Q psy11152 76 --GAPY----------VTTLETLD----AYDCDFCVHGALEVLVS 104 (112)
Q Consensus 76 --~~~~----------~~~~~fi~----~l~~~~iv~G~D~~f~~ 104 (112)
|+++ +++++|++ +++++.|++|+||+||.
T Consensus 77 ~~~~~~~~~~~~~~a~lsa~~Fi~~L~~~l~~~~ivvG~df~FG~ 121 (182)
T smart00764 77 SYFLKEQDVVIKSQTTLDLRIFRKYIAPALGITHRYVGEEPFSPV 121 (182)
T ss_pred hhhcCchhHHHHHHhcCCHHHHHHHHHHHcCceEEEEcCCCCCCC
Confidence 1111 47888873 68999999999999996
Proteins of this family contain the C-terminal domain of citrate lyase ligase EC:6.2.1.22.
>PRK13670 hypothetical protein; Provisional
Back Show alignment and domain information
Probab=99.52 E-value=8e-14 Score=109.98 Aligned_cols=91 Identities=29% Similarity=0.317 Sum_probs=71.3
Q ss_pred ceEEEEecccCcCCHHHHHHHHHHHHcCC-eEEEEEecCcccccCCCCCCcCHHHHHHHHhhccCCCEEEE--cCCC--C
Q psy11152 6 LLATSLQSNYDMVHFGHANNLRQAKELGN-YLVVGVHTDEEISKHKGPPVFTQQERYKMVRGIKWVDEVVE--GAPY--V 80 (112)
Q Consensus 6 ~~~v~~~G~FD~~H~GH~~ll~~a~~~~~-~lvv~v~~d~~~~~~k~~~i~s~~eR~~~l~~~~~vd~vi~--~~~~--~ 80 (112)
|+++-++-=|||||+||+.+|++|++.+. .+++++.+..++.+.. +.+++.++|.+++.++ |||.|++ |+ + .
T Consensus 1 Mk~~GIIaEfdg~H~GH~~~i~~a~~~a~~~~~~~Vmp~~f~qrg~-p~i~~~~~R~~~a~~~-GvD~vielpf~-~a~~ 77 (388)
T PRK13670 1 MKVTGIIVEYNPFHNGHLYHLNQAKKLTNADVTIAVMSGNFVQRGE-PAIVDKWTRAKMALEN-GVDLVVELPFL-YSVQ 77 (388)
T ss_pred CceeEEEeeeCCcCHHHHHHHHHHHHHHhCCCcEEEecHHHhCCCC-CCCCCHHHHHHHHHHc-CCCEEEEeCCc-hHhC
Confidence 34666677899999999999999998753 4444444554454322 4699999999999999 8999997 54 3 6
Q ss_pred CHHHHHH-------hcCCCEEEEcCC
Q psy11152 81 TTLETLD-------AYDCDFCVHGAL 99 (112)
Q Consensus 81 ~~~~fi~-------~l~~~~iv~G~D 99 (112)
++++|++ +++++.+|+|+|
T Consensus 78 sae~F~~~aV~iL~~l~v~~lv~G~e 103 (388)
T PRK13670 78 SADFFAEGAVSILDALGVDSLVFGSE 103 (388)
T ss_pred CHHHHHHhHHHHHHHcCCCEEEEcCC
Confidence 8888864 489999999999
>cd02164 PPAT_CoAS phosphopantetheine adenylyltransferase domain of eukaryotic and archaeal bifunctional enzymes
Back Show alignment and domain information
Probab=99.50 E-value=5.4e-14 Score=97.44 Aligned_cols=60 Identities=23% Similarity=0.296 Sum_probs=50.3
Q ss_pred EEEEecccCcCCHHHHHHHHHHHHcC-CeEEEEEecCcccccCCCC-CCcCHHHHHHHHhhc
Q psy11152 8 ATSLQSNYDMVHFGHANNLRQAKELG-NYLVVGVHTDEEISKHKGP-PVFTQQERYKMVRGI 67 (112)
Q Consensus 8 ~v~~~G~FD~~H~GH~~ll~~a~~~~-~~lvv~v~~d~~~~~~k~~-~i~s~~eR~~~l~~~ 67 (112)
+|++.|+||++|.||+.+|++|.+.+ +++++++++++....++.+ +++|.++|+++++.+
T Consensus 1 ~v~~GGtFD~lH~GH~~Ll~~a~~~~~d~v~vgvt~d~~~~~k~~~~~i~s~e~R~~~l~~~ 62 (143)
T cd02164 1 KVAVGGTFDRLHDGHKILLSVAFLLAGEKLIIGVTSDELLKNKSLKELIEPYEERIANLHEF 62 (143)
T ss_pred CEEEcccCCCCCHHHHHHHHHHHHHhcCCcEEEEeCchhcccCCCCCCCCCHHHHHHHHHHH
Confidence 37899999999999999999999998 7799999998844332333 689999999999865
The PPAT domain of the bifunctional enzyme with PPAT and DPCK functions. The final two steps of the CoA biosynthesis pathway are catalyzed by phosphopantetheine adenylyltransferase (PPAT) and dephospho-CoA (dPCoA) kinase (DPCK). The PPAT reaction involves the reversible adenylation of 4'-phosphopantetheine to form 3'-dPCoA and PPi, and DPCK catalyses phosphorylation of the 3'-hydroxy group of the ribose moiety of dPCoA. In eukaryotes the two enzymes are part of a large multienzyme complex . Studies in Corynebacterium ammoniagenes suggested that separate enzymes were present, and this was confirmed through identification of the bacterial PPAT/CoAD.
>PF01467 CTP_transf_2: Cytidylyltransferase; InterPro: IPR004820 This family includes []: Cholinephosphate cytidyltransferase (P49585 from SWISSPROT)
Back Show alignment and domain information
Probab=99.47 E-value=1.1e-13 Score=93.79 Aligned_cols=62 Identities=35% Similarity=0.469 Sum_probs=42.9
Q ss_pred EEecccCcCCHHHHHHHHHHHHcCCe-EEEEEecCcccccCCCCCCcCHHHHHHHHhhccCCCE
Q psy11152 10 SLQSNYDMVHFGHANNLRQAKELGNY-LVVGVHTDEEISKHKGPPVFTQQERYKMVRGIKWVDE 72 (112)
Q Consensus 10 ~~~G~FD~~H~GH~~ll~~a~~~~~~-lvv~v~~d~~~~~~k~~~i~s~~eR~~~l~~~~~vd~ 72 (112)
++.|+|||+|.||+.++++|++.++. +++++.++....+ .+.+++|.++|+++++.+...+.
T Consensus 1 l~~GsFdP~H~GH~~~l~~a~~~~~~~~vi~v~~~~~~~k-~~~~~~~~~~R~~ml~~~~~~~~ 63 (157)
T PF01467_consen 1 LFGGSFDPPHNGHLNLLREARELFDEDLVIVVPSDNSPHK-DKKPIFSFEERLEMLRAAFKDDP 63 (157)
T ss_dssp EEEE--TT--HHHHHHHHHHHHHSSESEEEEEEEEHHCHS-TTSSSSTHHHHHHHHHHHHTTCT
T ss_pred CeeeEcCcccHHHHHHHHHHHHhccccccccccccccccc-cccccCcHHHHHHHHHHHHhhcC
Confidence 57899999999999999999999986 4555555443221 11268999999999987644444
Glycerol-3-phosphate cytidyltransferase (P27623 from SWISSPROT). CTP:cholinephosphate cytidylyltransferase (CCT) is a key regulatory enzyme in phosphatidylcholine biosynthesis that catalyzes the formation of CDP-choline. A comparison of the catalytic domains of CCTs from a wide variety of organisms reveals a large number of completely conserved residues. There may be a role for the conserved HXGH sequence in catalysis. The membrane-binding domain in rat CCT has been defined, and it has been suggested that lipids may play a role in inactivating the enzyme. A phosphorylation domain has been described [].; GO: 0016779 nucleotidyltransferase activity, 0009058 biosynthetic process; PDB: 1O6B_A 1H1T_A 1B6T_A 1GN8_A 1QJC_A 3ELB_A 3NBK_A 3NBA_A 1TFU_A 3LCJ_A ....
>PRK05379 bifunctional nicotinamide mononucleotide adenylyltransferase/ADP-ribose pyrophosphatase; Provisional
Back Show alignment and domain information
Probab=99.40 E-value=6.5e-12 Score=97.53 Aligned_cols=99 Identities=17% Similarity=0.121 Sum_probs=69.7
Q ss_pred CCCCCceEEEEecccCcCCHHHHHHHHHHHHcCCeEEEEEecCcccccCCCCCCcCHHHHHHHHhhc-cCCC--EEEE--
Q psy11152 1 METLNLLATSLQSNYDMVHFGHANNLRQAKELGNYLVVGVHTDEEISKHKGPPVFTQQERYKMVRGI-KWVD--EVVE-- 75 (112)
Q Consensus 1 ~~~~~~~~v~~~G~FD~~H~GH~~ll~~a~~~~~~lvv~v~~d~~~~~~k~~~i~s~~eR~~~l~~~-~~vd--~vi~-- 75 (112)
|.++..++++++|.|||+|.||+.++++|++.+++++|++.+.......+ ..+|.++|++|++.. ++++ .+.+
T Consensus 1 ~~~~~~~~~~~~G~F~P~H~GHl~~i~~a~~~~d~l~v~i~s~~~~~~~~--~~~~~~~R~~mi~~~~~~~~~~r~~~~p 78 (340)
T PRK05379 1 PMNRRYDYLVFIGRFQPFHNGHLAVIREALSRAKKVIVLIGSADLARSIK--NPFSFEERAQMIRAALAGIDLARVTIRP 78 (340)
T ss_pred CCCccceEEEEeeccCCCCHHHHHHHHHHHHHCCEEEEEEccCCCCCcCC--CCCCHHHHHHHHHHHhhcCCCceEEEEE
Confidence 34566789999999999999999999999999999999998643222222 348999999999865 5454 2332
Q ss_pred cCCC-CCHHHH---HHh-------cCCCEEEEcCCCC
Q psy11152 76 GAPY-VTTLET---LDA-------YDCDFCVHGALEV 101 (112)
Q Consensus 76 ~~~~-~~~~~f---i~~-------l~~~~iv~G~D~~ 101 (112)
..+. .+..-+ +++ -+++.+++|+|+.
T Consensus 79 i~d~~~~~~~W~~~v~~~v~~~~~~~~~~~~~g~~~~ 115 (340)
T PRK05379 79 LRDSLYNDSLWLAEVQAAVAEHAGADARIGLIGHEKD 115 (340)
T ss_pred CCCCCcChHHHHHHHHHHHHhccCCCCcEEEECCcCC
Confidence 2221 122222 222 5789999997773
>cd00560 PanC Pantoate-beta-alanine ligase
Back Show alignment and domain information
Probab=99.38 E-value=1.2e-12 Score=99.38 Aligned_cols=85 Identities=18% Similarity=0.128 Sum_probs=68.9
Q ss_pred EEEEecccCcCCHHHHHHHHHHHHcCCeEEEEEecCccc-cc-CCCC-CCcCHHHHHHHHhhccCCCEEEEcCCC---CC
Q psy11152 8 ATSLQSNYDMVHFGHANNLRQAKELGNYLVVGVHTDEEI-SK-HKGP-PVFTQQERYKMVRGIKWVDEVVEGAPY---VT 81 (112)
Q Consensus 8 ~v~~~G~FD~~H~GH~~ll~~a~~~~~~lvv~v~~d~~~-~~-~k~~-~i~s~~eR~~~l~~~~~vd~vi~~~~~---~~ 81 (112)
.|.++|+ +|.||++||++|++.++.++|++..+|.. .+ ...+ .+.+.++|.++++++ |||.+ |+|+ +.
T Consensus 26 ~V~TmG~---LH~GH~~LI~~a~~~a~~vVvtf~~nP~qf~~~ed~~~y~~t~e~d~~ll~~~-GvD~v--F~p~~~~m~ 99 (277)
T cd00560 26 FVPTMGA---LHEGHLSLVRRARAENDVVVVSIFVNPLQFGPNEDLDRYPRTLEADLALLEEA-GVDLL--FAPSVEEMY 99 (277)
T ss_pred EEECCCc---ccHHHHHHHHHHHHhCCEEEEEecCChhhcCCcccccccCCCHHHHHHHHHHC-CCCEE--ECCCHHHcC
Confidence 4578999 99999999999999999899999988853 22 2212 688999999999999 89988 5544 66
Q ss_pred HHHHH----HhcCCCEEEEcC
Q psy11152 82 TLETL----DAYDCDFCVHGA 98 (112)
Q Consensus 82 ~~~fi----~~l~~~~iv~G~ 98 (112)
|++|+ ..++++.+++|.
T Consensus 100 p~~f~~~~v~~~~~~~il~G~ 120 (277)
T cd00560 100 PEGLFSTFVDVGPLSEVLEGA 120 (277)
T ss_pred CCCCceEEEecCCCceEEecC
Confidence 77765 347899999999
PanC Pantoate-beta-alanine ligase, also known as pantothenate synthase, catalyzes the formation of pantothenate from pantoate and alanine. PanC belongs to a large superfamily of nucleotidyltransferases that includes , ATP sulfurylase (ATPS), phosphopantetheine adenylyltransferase (PPAT), and the amino-acyl tRNA synthetases. The enzymes of this family are structurally similar and share a dinucleotide-binding domain.
>PRK13671 hypothetical protein; Provisional
Back Show alignment and domain information
Probab=99.38 E-value=6.4e-12 Score=96.20 Aligned_cols=88 Identities=19% Similarity=0.253 Sum_probs=68.4
Q ss_pred EEEecccCcCCHHHHHHHHHHHHc--CCeEEEEEecCcccccCCCC-CCcCHHHHHHHHhhccCCCEEEEcC-CC--CCH
Q psy11152 9 TSLQSNYDMVHFGHANNLRQAKEL--GNYLVVGVHTDEEISKHKGP-PVFTQQERYKMVRGIKWVDEVVEGA-PY--VTT 82 (112)
Q Consensus 9 v~~~G~FD~~H~GH~~ll~~a~~~--~~~lvv~v~~d~~~~~~k~~-~i~s~~eR~~~l~~~~~vd~vi~~~-~~--~~~ 82 (112)
+-++-.|||||.||+.++++|++. ++.+++.++.++. .|+. .+++.++|.+|+..+ |+|.||+.. .+ .++
T Consensus 3 ~GIIaeFNP~H~GHl~~~~~a~~~~~~d~vi~vpSg~~~---qrg~pa~~~~~~R~~ma~~~-G~DLViELP~~~a~~sA 78 (298)
T PRK13671 3 IGIIAEYNPFHNGHIYQINYIKNKFPNEKIIVILSGKYT---QRGEIAVASFEKRKKIALKY-GVDKVIKLPFEYATQAA 78 (298)
T ss_pred eeEEeeeCCccHHHHHHHHHHHHhcCCCEEEEEECcCCC---CCCCCCCCCHHHHHHHHHHc-CCCEEEeccHHHHhhch
Confidence 345569999999999999999997 4677776666652 3443 677999999999999 899999631 11 355
Q ss_pred HHH-------HHhcCCCEEEEcCCC
Q psy11152 83 LET-------LDAYDCDFCVHGALE 100 (112)
Q Consensus 83 ~~f-------i~~l~~~~iv~G~D~ 100 (112)
+.| +.++++|.++.|.++
T Consensus 79 e~FA~gaV~lL~~lgvd~l~FGsE~ 103 (298)
T PRK13671 79 HIFAKGAIKKLNKEKIDKLIFGSES 103 (298)
T ss_pred HHHHHHHHHHHHHcCCCEEEECCCC
Confidence 556 468899999999987
>PRK00071 nadD nicotinic acid mononucleotide adenylyltransferase; Provisional
Back Show alignment and domain information
Probab=99.36 E-value=4e-12 Score=92.00 Aligned_cols=91 Identities=19% Similarity=0.110 Sum_probs=62.2
Q ss_pred ceEEEEecccCcCCHHHHHHHHHHHHcC--CeEEEEEecCcccccCCCC-CCcCHHHHHHHHhhc-cCCCEEEEcCCC--
Q psy11152 6 LLATSLQSNYDMVHFGHANNLRQAKELG--NYLVVGVHTDEEISKHKGP-PVFTQQERYKMVRGI-KWVDEVVEGAPY-- 79 (112)
Q Consensus 6 ~~~v~~~G~FD~~H~GH~~ll~~a~~~~--~~lvv~v~~d~~~~~~k~~-~i~s~~eR~~~l~~~-~~vd~vi~~~~~-- 79 (112)
+++++++|+|||+|.||+.++++|.+.. +.+++.+++.+. .|.. .+++.++|++|++.. ++.+.+.+.+-+
T Consensus 4 ~~i~i~gGsFdP~H~GH~~l~~~a~~~~~~d~v~~~p~~~~~---~k~~~~~~~~~~R~~m~~~a~~~~~~~~v~~~E~~ 80 (203)
T PRK00071 4 KRIGLFGGTFDPPHYGHLAIAEEAAERLGLDEVWFLPNPGPP---HKPQKPLAPLEHRLAMLELAIADNPRFSVSDIELE 80 (203)
T ss_pred cEEEEEeeCCCccCHHHHHHHHHHHHHcCCCEEEEEeCCCCC---CCCCCCCCCHHHHHHHHHHHhcCCCceEEeHHHHh
Confidence 4688999999999999999999999876 666666665442 2323 588999999999754 556655542111
Q ss_pred ----CCHHH---HHHhcCCC---EEEEcCC
Q psy11152 80 ----VTTLE---TLDAYDCD---FCVHGAL 99 (112)
Q Consensus 80 ----~~~~~---fi~~l~~~---~iv~G~D 99 (112)
.-+.+ .+++..++ ++++|.|
T Consensus 81 ~~~~syT~~tl~~l~~~~p~~~~~fiiG~D 110 (203)
T PRK00071 81 RPGPSYTIDTLRELRARYPDVELVFIIGAD 110 (203)
T ss_pred CCCCCCHHHHHHHHHHHCCCCcEEEEEcHH
Confidence 11222 23333344 8999988
>cd02167 NMNAT_NadR Nicotinamide/nicotinate mononucleotide adenylyltransferase of bifunctional NadR-like proteins
Back Show alignment and domain information
Probab=99.35 E-value=2.8e-12 Score=90.04 Aligned_cols=94 Identities=14% Similarity=0.092 Sum_probs=64.9
Q ss_pred EEEEecccCcCCHHHHHHHHHHHHcCCeEEEEEecCcccccCCCCCCcCHHHHHHHHhhc-cCCCEEEE--cC-CCCC--
Q psy11152 8 ATSLQSNYDMVHFGHANNLRQAKELGNYLVVGVHTDEEISKHKGPPVFTQQERYKMVRGI-KWVDEVVE--GA-PYVT-- 81 (112)
Q Consensus 8 ~v~~~G~FD~~H~GH~~ll~~a~~~~~~lvv~v~~d~~~~~~k~~~i~s~~eR~~~l~~~-~~vd~vi~--~~-~~~~-- 81 (112)
+++++|+|||+|.||+.++++|.+.+|+++|++.+.+.... ....+|.++|++|++.. +..+.+.+ .+ ++..
T Consensus 1 igl~~G~F~P~H~GHl~li~~a~~~~d~v~vi~~~~~~~~~--~~~~~~~~~R~~mi~~a~~~~~~~~v~~~~~~d~~~~ 78 (158)
T cd02167 1 IGIVFGKFAPLHTGHVYLIYKALSQVDELLIIVGSDDTRDD--ARTGLPLEKRLRWLREIFPDQENIVVHTLNEPDIPEY 78 (158)
T ss_pred CEEEeeccCCCCHHHHHHHHHHHHHCCEEEEEECCCCcccc--cCCCCCHHHHHHHHHHHhcCCCCEEEEeCCCCCCCCC
Confidence 36889999999999999999999999999999987663211 12467999999999865 44333333 11 1111
Q ss_pred ---HHHH---HH----h-c--CCCEEEEcCCCCCC
Q psy11152 82 ---TLET---LD----A-Y--DCDFCVHGALEVLV 103 (112)
Q Consensus 82 ---~~~f---i~----~-l--~~~~iv~G~D~~f~ 103 (112)
..++ ++ + . +++.++.|.++...
T Consensus 79 ~~~w~~w~~~v~~~v~~~~~~~~~~vf~~~~~~~~ 113 (158)
T cd02167 79 PNGWDIWSNRVKTLIAENTRCRPDIVFTAEEYEAA 113 (158)
T ss_pred chhHHHHHHHHHHHHhhhcCCCCCEEEEccCcchh
Confidence 2222 22 1 1 77899999887433
NMNAT domain of NadR protein. The NadR protein (NadR) is a bifunctional enzyme possessing both NMN adenylytransferase (NMNAT) and ribosylnicotinamide kinase (RNK) activities. Its function is essential for the growth and survival of H. influenzae and thus may present a new highly specific anti-infectious drug target. The N-terminal domain that hosts the NMNAT activity is closely related to archaeal NMNAT. The bound NAD at the active site of the NMNAT domain reveals several critical interactions between NAD and the protein.The NMNAT domain of hiNadR defines yet another member of the pyridine nucleotide adenylyltransferase
>PRK00380 panC pantoate--beta-alanine ligase; Reviewed
Back Show alignment and domain information
Probab=99.33 E-value=1.8e-12 Score=98.52 Aligned_cols=86 Identities=15% Similarity=0.100 Sum_probs=67.3
Q ss_pred EEEecccCcCCHHHHHHHHHHHHcCCeEEEEEecCccc-c-cCCCC-CCcCHHHHHHHHhhccCCCEEEEcCCC-CCHHH
Q psy11152 9 TSLQSNYDMVHFGHANNLRQAKELGNYLVVGVHTDEEI-S-KHKGP-PVFTQQERYKMVRGIKWVDEVVEGAPY-VTTLE 84 (112)
Q Consensus 9 v~~~G~FD~~H~GH~~ll~~a~~~~~~lvv~v~~d~~~-~-~~k~~-~i~s~~eR~~~l~~~~~vd~vi~~~~~-~~~~~ 84 (112)
|.++|+ +|.||+++|++|++.++.+++++.++|.. . +...+ .++|.++|.++++++ |||.++..+.. +.|++
T Consensus 27 v~tmG~---lH~GH~~Li~~a~~~a~~vVvTf~~~P~qf~~~~~~~~~~~t~e~~~~ll~~~-GvD~v~~p~~~~myp~~ 102 (281)
T PRK00380 27 VPTMGA---LHEGHLSLVREARAEADIVVVSIFVNPLQFGPNEDLDRYPRTLEADLALLEAA-GVDLVFAPSVEEMYPQG 102 (281)
T ss_pred EEccCc---eeHHHHHHHHHHHHhCCEEEEeCCCCHHHhCCCccccccCCCHHHHHHHHHHc-CCCEEEeCCHHHCCCcc
Confidence 456777 99999999999999998888898888742 2 12222 689999999999999 89999874322 67788
Q ss_pred HHHhc---CCCEEEEcC
Q psy11152 85 TLDAY---DCDFCVHGA 98 (112)
Q Consensus 85 fi~~l---~~~~iv~G~ 98 (112)
|.... ++..+++|.
T Consensus 103 f~~~i~~~~~~~vl~G~ 119 (281)
T PRK00380 103 LQTYVSVPGLSDVLEGA 119 (281)
T ss_pred ceeEEEcccccccccCC
Confidence 86432 377999999
>COG1019 Predicted nucleotidyltransferase [General function prediction only]
Back Show alignment and domain information
Probab=99.31 E-value=3.2e-12 Score=88.94 Aligned_cols=62 Identities=24% Similarity=0.423 Sum_probs=54.2
Q ss_pred CceEEEEecccCcCCHHHHHHHHHHHHcCCeEEEEEecCcccccCCCCCCcCHHHHHHHHhh
Q psy11152 5 NLLATSLQSNYDMVHFGHANNLRQAKELGNYLVVGVHTDEEISKHKGPPVFTQQERYKMVRG 66 (112)
Q Consensus 5 ~~~~v~~~G~FD~~H~GH~~ll~~a~~~~~~lvv~v~~d~~~~~~k~~~i~s~~eR~~~l~~ 66 (112)
+.+.++++|+||.+|.||..||+.|.+.++.+++|+++|+....++...+.+++.|.+-|.+
T Consensus 4 kfm~vavGGTFd~LH~GHk~LL~~A~~~G~~v~IGlTsDe~~k~~k~~~i~p~~~R~~~l~~ 65 (158)
T COG1019 4 KFMKVAVGGTFDRLHDGHKKLLEVAFEIGDRVTIGLTSDELAKKKKKEKIEPYEVRLRNLRN 65 (158)
T ss_pred cceEEEecccchhhhhhHHHHHHHHHHhCCeEEEEEccHHHHHHhccccCCcHHHHHHHHHH
Confidence 34678999999999999999999999999999999999998765444589999999986654
>PRK01153 nicotinamide-nucleotide adenylyltransferase; Provisional
Back Show alignment and domain information
Probab=99.30 E-value=4.3e-11 Score=85.29 Aligned_cols=90 Identities=19% Similarity=0.208 Sum_probs=59.9
Q ss_pred EEEEecccCcCCHHHHHHHHHHHHcCCeEEEEEecCcccccCCCCCCcCHHHHHHHHhhc-c--CC--CEEEE--cCCCC
Q psy11152 8 ATSLQSNYDMVHFGHANNLRQAKELGNYLVVGVHTDEEISKHKGPPVFTQQERYKMVRGI-K--WV--DEVVE--GAPYV 80 (112)
Q Consensus 8 ~v~~~G~FD~~H~GH~~ll~~a~~~~~~lvv~v~~d~~~~~~k~~~i~s~~eR~~~l~~~-~--~v--d~vi~--~~~~~ 80 (112)
+++++|.|||+|.||+.++++|.+.++++++++.+.... .+....++.++|.+|++.. . ++ +.+.+ .++..
T Consensus 2 ~gl~~G~F~P~H~GHl~~i~~a~~~~d~v~v~i~s~~~~--~~~~~p~~~~~R~~mi~~a~~~~~~~~~~~~~~pi~D~~ 79 (174)
T PRK01153 2 RALFIGRFQPFHKGHLEVIKWILEEVDELIIGIGSAQES--HTLKNPFTAGERILMIRKALEEEGIDLSRYYIIPIPDIE 79 (174)
T ss_pred EEEEeeccCCCCHHHHHHHHHHHHhCCEEEEEecCCCCC--CCCCCCCCHHHHHHHHHHHHhcCCCCcceeeEecCCCcc
Confidence 589999999999999999999999999999988653211 1112347889999999843 2 23 12332 22212
Q ss_pred CHHHHH---Hhc--CCCEEEEcCC
Q psy11152 81 TTLETL---DAY--DCDFCVHGAL 99 (112)
Q Consensus 81 ~~~~fi---~~l--~~~~iv~G~D 99 (112)
..+.+. ++. .+|.++.|..
T Consensus 80 ~~~~w~~~v~~~~~~~d~v~~~~~ 103 (174)
T PRK01153 80 FNSIWVSHVESYTPPFDVVYTGNP 103 (174)
T ss_pred hHHHHHHHHHHhCCCCCEEEECCh
Confidence 333343 322 6688888864
>cd02156 nt_trans nucleotidyl transferase superfamily
Back Show alignment and domain information
Probab=99.30 E-value=5.4e-12 Score=82.54 Aligned_cols=58 Identities=17% Similarity=0.239 Sum_probs=49.5
Q ss_pred EEEEecccCcCCHHHHHHHHHHHHcCCeEEEEEecCcccccCCCCCCcCHHHHHHHHhhc
Q psy11152 8 ATSLQSNYDMVHFGHANNLRQAKELGNYLVVGVHTDEEISKHKGPPVFTQQERYKMVRGI 67 (112)
Q Consensus 8 ~v~~~G~FD~~H~GH~~ll~~a~~~~~~lvv~v~~d~~~~~~k~~~i~s~~eR~~~l~~~ 67 (112)
+++++|+||++|.||+.++++|.+.++.+++++..++.... + ..+.+.++|.++++++
T Consensus 1 ~~~~~G~Fdp~H~GH~~l~~~a~~~~d~~i~~i~~~~~~~~-~-~~~~~~~~R~~~l~~~ 58 (105)
T cd02156 1 KARFPGEPGYLHIGHAKLICRAKGIADQCVVRIDDNPPVKV-W-QDPHELEERKESIEED 58 (105)
T ss_pred CEEeCCCCCCCCHHHHHHHHHHHHhCCcEEEEEcCCCcccc-c-CChHHHHHHHHHHHHH
Confidence 36899999999999999999999999989999988775421 1 2589999999999987
nt_trans (nucleotidyl transferase) This superfamily includes the class I amino-acyl tRNA synthetases, pantothenate synthetase (PanC), ATP sulfurylase, and the cytidylyltransferases, all of which have a conserved dinucleotide-binding domain.
>PRK08099 bifunctional DNA-binding transcriptional repressor/ NMN adenylyltransferase; Provisional
Back Show alignment and domain information
Probab=99.28 E-value=3.2e-11 Score=95.51 Aligned_cols=95 Identities=12% Similarity=-0.005 Sum_probs=66.7
Q ss_pred eEEEEecccCcCCHHHHHHHHHHHHcCCeEEEEEecCccc-----ccCCCCCCcCHHHHHHHHhhc-cCCCEEEE--cCC
Q psy11152 7 LATSLQSNYDMVHFGHANNLRQAKELGNYLVVGVHTDEEI-----SKHKGPPVFTQQERYKMVRGI-KWVDEVVE--GAP 78 (112)
Q Consensus 7 ~~v~~~G~FD~~H~GH~~ll~~a~~~~~~lvv~v~~d~~~-----~~~k~~~i~s~~eR~~~l~~~-~~vd~vi~--~~~ 78 (112)
++++++|+|||+|.||+.+|++|.+.+++++|++.+++.. .+.+....+|.++|.+++++. +..++|.+ ++.
T Consensus 53 ~~~v~~G~FdP~H~GH~~lI~~A~~~~d~l~v~v~~~~~~~~~~~~~~~~~~~~s~~~R~~~l~~~~~~~~~v~v~~~~~ 132 (399)
T PRK08099 53 KIGVVFGKFYPLHTGHIYLIQRACSQVDELHIIICYDDERDRKLFEDSAMSQQPTVSDRLRWLLQTFKYQKNIKIHAFNE 132 (399)
T ss_pred cEEEEEEecCCCCHHHHHHHHHHHHHCCeeEEEEEccCCcchhhcccccccCCCCHHHHHHHHHHHhCCCCCEEEEecCC
Confidence 5889999999999999999999999999988888765421 111223688999999999875 45444443 333
Q ss_pred C----C--CHHHH-------HHh--cCCCEEEEcCCCC
Q psy11152 79 Y----V--TTLET-------LDA--YDCDFCVHGALEV 101 (112)
Q Consensus 79 ~----~--~~~~f-------i~~--l~~~~iv~G~D~~ 101 (112)
. . ....+ +.. .+++.++.|+++.
T Consensus 133 ~~~~~~~~~~~~w~~~v~~~v~~~~~~~~~vf~~~~~d 170 (399)
T PRK08099 133 EGMEPYPHGWDVWSNGIKAFMAEKGIQPDVIYTSEEQD 170 (399)
T ss_pred CCCCCCCccHHHHHHHHHHHHHhcCCCCCEEEEeCCCC
Confidence 1 1 11222 222 3689999998874
>cd02165 NMNAT Nicotinamide/nicotinate mononucleotide adenylyltransferase
Back Show alignment and domain information
Probab=99.26 E-value=2.4e-11 Score=87.16 Aligned_cols=90 Identities=16% Similarity=0.164 Sum_probs=61.2
Q ss_pred EEEEecccCcCCHHHHHHHHHHHHcC--CeEEEEEecCcccccCCCCCCcCHHHHHHHHhhc-cCCCEEEEcCC------
Q psy11152 8 ATSLQSNYDMVHFGHANNLRQAKELG--NYLVVGVHTDEEISKHKGPPVFTQQERYKMVRGI-KWVDEVVEGAP------ 78 (112)
Q Consensus 8 ~v~~~G~FD~~H~GH~~ll~~a~~~~--~~lvv~v~~d~~~~~~k~~~i~s~~eR~~~l~~~-~~vd~vi~~~~------ 78 (112)
++++.|+|||+|.||+.+++.|.+.+ +++++.++.++. .|+....+.++|+++++.+ +....+.+.+.
T Consensus 1 i~i~gGsFdP~H~GH~~~~~~a~~~~~~d~v~~~~~~~~~---~k~~~~~~~~~R~~m~~~~~~~~~~i~v~~~e~~~~~ 77 (192)
T cd02165 1 IALFGGSFDPPHLGHLAIAEEALEELGLDRVLLLPSANPP---HKPPKPASFEHRLEMLKLAIEDNPKFEVSDIEIKRDG 77 (192)
T ss_pred CeEEeeCCCCCCHHHHHHHHHHHHHcCCCEEEEEeCCCCC---CCCCCCCCHHHHHHHHHHHHcCCCCEEEeHHHHhCCC
Confidence 46899999999999999999999998 788777665442 2334678999999999865 33444554111
Q ss_pred CCCHHH---HHHhcC--CC-EEEEcCCC
Q psy11152 79 YVTTLE---TLDAYD--CD-FCVHGALE 100 (112)
Q Consensus 79 ~~~~~~---fi~~l~--~~-~iv~G~D~ 100 (112)
...+.+ .+++.. .+ ++++|.|-
T Consensus 78 ~~~t~~tl~~l~~~~p~~~~~~liG~D~ 105 (192)
T cd02165 78 PSYTIDTLEELRERYPNAELYFIIGSDN 105 (192)
T ss_pred CCCHHHHHHHHHHhccCCCEEEEEcHHH
Confidence 112222 233332 33 88899884
Nicotinamide/nicotinate mononucleotide (NMN/ NaMN)adenylyltransferase (NMNAT). NMNAT represents the primary bacterial and eukaryotic adenylyltransferases for nicotinamide-nucleotide and for the deamido form, nicotinate nucleotide. It is an indispensable enzyme in the biosynthesis of NAD(+) and NADP(+). Nicotinamide-nucleotide adenylyltransferase synthesizes NAD via the salvage pathway, while nicotinate-nucleotide adenylyltransferase synthesizes the immediate precursor of NAD via the de novo pathway. Human NMNAT displays unique dual substrate specificity toward both NMN and NaMN, and can participate in both de novo and salvage pathways of NAD synthesis.
>cd02168 NMNAT_Nudix Nicotinamide/nicotinate mononucleotide adenylyltransferase of bifunctional proteins, also containing a Nudix hydrolase domain
Back Show alignment and domain information
Probab=99.26 E-value=1.4e-11 Score=88.24 Aligned_cols=91 Identities=13% Similarity=0.064 Sum_probs=62.5
Q ss_pred EEEecccCcCCHHHHHHHHHHHHcCCeEEEEEecCcccccCCCCCCcCHHHHHHHHhhc-c--CCC--EEEE--cCCCC-
Q psy11152 9 TSLQSNYDMVHFGHANNLRQAKELGNYLVVGVHTDEEISKHKGPPVFTQQERYKMVRGI-K--WVD--EVVE--GAPYV- 80 (112)
Q Consensus 9 v~~~G~FD~~H~GH~~ll~~a~~~~~~lvv~v~~d~~~~~~k~~~i~s~~eR~~~l~~~-~--~vd--~vi~--~~~~~- 80 (112)
++++|+|||+|.||+.++++|.+.+++++|++.+.+.... + ...+|.++|++|++.. . ++| .+.+ ..+..
T Consensus 2 ~l~~GrF~P~H~GHl~~i~~a~~~~~~vii~i~s~~~~~~-~-~~p~~~~eR~~mi~~~~~~~~~~~~rv~i~pi~D~~~ 79 (181)
T cd02168 2 LVYIGRFQPFHNGHLAVVLIALEKAKKVIILIGSARTARN-I-KNPWTSEEREVMIEAALSDAGADLARVHFRPLRDHLY 79 (181)
T ss_pred eEEeeccCCCCHHHHHHHHHHHHHCCeEEEEeCCCCCCCC-C-CCCcCHHHHHHHHHHHHhccCCCcceEEEEecCCCCC
Confidence 6899999999999999999999999999999877543221 2 2458999999999874 2 233 3333 32211
Q ss_pred CHHHH---HH-------hcCCCEEEEcCCCC
Q psy11152 81 TTLET---LD-------AYDCDFCVHGALEV 101 (112)
Q Consensus 81 ~~~~f---i~-------~l~~~~iv~G~D~~ 101 (112)
...-+ ++ .-+++.+++|.|+.
T Consensus 80 ~~~~W~~~v~~~v~~~~~~~~~i~~~g~~kd 110 (181)
T cd02168 80 SDNLWLAEVQQQVLEIAGGSASVGLVGHRKD 110 (181)
T ss_pred ChHHHHHHHHHhChHhhCCCCcEEEeCCccC
Confidence 22222 22 12568899997774
N-terminal NMNAT (Nicotinamide/nicotinate mononucleotide adenylyltransferase) domain of a novel bifunctional enzyme endowed with NMN adenylyltransferase and Nudix hydrolase activities. This domain is highly homologous to the archeal NMN adenyltransferase that catalyzes NAD synthesis from NMN and ATP. NMNAT is an essential enzyme in the biosynthesis of NAD(+) and NADP(+). Nicotinamide-nucleotide adenylyltransferase synthesizes NAD via the salvage pathway, while nicotinate-nucleotide adenylyltransferase synthesizes the immediate precursor of NAD via the de novo pathway. The C-terminal domain of this enzyme shares homology with the archaeal ADP-ribose pyrophosphatase, a member of the 'Nudix' hydrolase family.
>COG1057 NadD Nicotinic acid mononucleotide adenylyltransferase [Coenzyme metabolism]
Back Show alignment and domain information
Probab=99.23 E-value=3.8e-11 Score=87.19 Aligned_cols=93 Identities=16% Similarity=0.106 Sum_probs=63.6
Q ss_pred CceEEEEecccCcCCHHHHHHHHHHHHcC--CeEEEEEecCcccccCCC-CCCcCHHHHHHHHhh-ccCCCEEEEcCCC-
Q psy11152 5 NLLATSLQSNYDMVHFGHANNLRQAKELG--NYLVVGVHTDEEISKHKG-PPVFTQQERYKMVRG-IKWVDEVVEGAPY- 79 (112)
Q Consensus 5 ~~~~v~~~G~FD~~H~GH~~ll~~a~~~~--~~lvv~v~~d~~~~~~k~-~~i~s~~eR~~~l~~-~~~vd~vi~~~~~- 79 (112)
.+++++++|+|||+|.||+.+.++|.+.. +++++.++..+ +.|. ....|.++|++|++- +++.+..-+.+-+
T Consensus 2 ~~~i~lfGGsFdP~H~GHl~ia~~~~~~l~ld~vi~~ps~~~---p~k~~~~~a~~~~R~~Ml~la~~~~~~~~v~~~e~ 78 (197)
T COG1057 2 MKKIALFGGSFDPPHYGHLLIAEEALDQLGLDKVIFLPSPVP---PHKKKKELASAEHRLAMLELAIEDNPRFEVSDREI 78 (197)
T ss_pred CceEEEeccCCCCCCHHHHHHHHHHHHhcCCCeEEEecCCCC---CCCCCccCCCHHHHHHHHHHHHhcCCCcceeHHHH
Confidence 46789999999999999999999999885 45555555443 2333 368999999999974 4555552221000
Q ss_pred ---------CCHHHHHHhcCCC---EEEEcCCC
Q psy11152 80 ---------VTTLETLDAYDCD---FCVHGALE 100 (112)
Q Consensus 80 ---------~~~~~fi~~l~~~---~iv~G~D~ 100 (112)
++-+.|-++++++ ++++|.|-
T Consensus 79 ~r~g~sYT~dTl~~~~~~~~p~~~~~fIiGaD~ 111 (197)
T COG1057 79 KRGGPSYTIDTLEHLRQEYGPDVELYFIIGADN 111 (197)
T ss_pred HcCCCcchHHHHHHHHHHhCCCCcEEEEEehHH
Confidence 1222333478888 58999883
>PRK13793 nicotinamide-nucleotide adenylyltransferase; Provisional
Back Show alignment and domain information
Probab=99.20 E-value=6.9e-11 Score=85.75 Aligned_cols=59 Identities=15% Similarity=0.224 Sum_probs=49.4
Q ss_pred eEEEEecccCcCCHHHHHHHHHHHHcCCeEEEEEecCcccccCCCCCCcCHHHHHHHHhhc
Q psy11152 7 LATSLQSNYDMVHFGHANNLRQAKELGNYLVVGVHTDEEISKHKGPPVFTQQERYKMVRGI 67 (112)
Q Consensus 7 ~~v~~~G~FD~~H~GH~~ll~~a~~~~~~lvv~v~~d~~~~~~k~~~i~s~~eR~~~l~~~ 67 (112)
..++++|.|.|||+||+++|++|++.|++++|++.+.......+ -.+|..||..|+...
T Consensus 5 d~~v~iGRFQPfH~GHl~~I~~al~~~devII~IGSA~~s~t~~--NPFTa~ER~~MI~~a 63 (196)
T PRK13793 5 DYLVFIGRFQPFHLAHMQTIEIALQQSRYVILALGSAQMERNIK--NPFLAIEREQMILSN 63 (196)
T ss_pred eEEEEEecCCCCcHHHHHHHHHHHHhCCEEEEEEccCCCCCCCC--CCCCHHHHHHHHHHh
Confidence 57899999999999999999999999999999999854322222 258999999999765
>TIGR01526 nadR_NMN_Atrans nicotinamide-nucleotide adenylyltransferase, NadR type
Back Show alignment and domain information
Probab=99.17 E-value=8.7e-11 Score=90.74 Aligned_cols=64 Identities=19% Similarity=0.105 Sum_probs=51.7
Q ss_pred eEEEEecccCcCCHHHHHHHHHHHHcCCeEEEEEecCcccccCCCCCCcCHHHHHHHHhhc-cCCCE
Q psy11152 7 LATSLQSNYDMVHFGHANNLRQAKELGNYLVVGVHTDEEISKHKGPPVFTQQERYKMVRGI-KWVDE 72 (112)
Q Consensus 7 ~~v~~~G~FD~~H~GH~~ll~~a~~~~~~lvv~v~~d~~~~~~k~~~i~s~~eR~~~l~~~-~~vd~ 72 (112)
++++++|+|||+|.||+.++++|.+.+++++|.+...+.. .+..+..|.++|+++++.. +..+.
T Consensus 2 ~i~i~~GsFdP~H~GHl~ii~~a~~~~d~v~v~~~~~~~~--~~~~~~~~~~~R~~~l~~~~~~~~~ 66 (325)
T TIGR01526 2 TIGVVFGKFYPLHTGHIYLIYEAFSKVDELHIVVGSLFYD--SKAKRPPPVQDRLRWLREIFKYQKN 66 (325)
T ss_pred cEEEEeeccCCCCHHHHHHHHHHHHHCCEEEEEECCCCcC--ccCCCCCCHHHHHHHHHHHhccCCC
Confidence 5889999999999999999999999999998888763311 1224678999999999754 55655
E. coli NadR has also been found to regulate the import of its substrate, nicotinamide ribonucleotide, but it is not known if the other members of this model share that activity.
>TIGR00124 cit_ly_ligase [citrate (pro-3S)-lyase] ligase
Back Show alignment and domain information
Probab=99.14 E-value=4.3e-10 Score=87.32 Aligned_cols=62 Identities=21% Similarity=0.242 Sum_probs=50.9
Q ss_pred ceEEEEecccCcCCHHHHHHHHHHHHcCCeEEEEEecCcccccCCCCCCcCHHHHHHHHhhc-cCCCEEE
Q psy11152 6 LLATSLQSNYDMVHFGHANNLRQAKELGNYLVVGVHTDEEISKHKGPPVFTQQERYKMVRGI-KWVDEVV 74 (112)
Q Consensus 6 ~~~v~~~G~FD~~H~GH~~ll~~a~~~~~~lvv~v~~d~~~~~~k~~~i~s~~eR~~~l~~~-~~vd~vi 74 (112)
.+++++.|+|||+|+||+.++++|.+.+|.++|.|..+ + ..++|.++|+++++.. +..++|.
T Consensus 139 ~~i~~~~g~fdP~t~GH~~li~~A~~~~d~~~v~v~~~------~-~~~f~~~~R~~~v~~~~~~~~nv~ 201 (332)
T TIGR00124 139 NKIGSIVMNANPFTNGHRYLIEQAARQCDWLHLFVVKE------D-ASLFSYDERFALVKQGIQDLSNVT 201 (332)
T ss_pred CcEEEEEeCcCCCchHHHHHHHHHHHHCCEEEEEEEeC------C-CCCCCHHHHHHHHHHHhcCCCCEE
Confidence 47899999999999999999999999999988888532 1 3589999999999753 4555444
ATP is cleaved to AMP and pyrophosphate during the reaction. The carboxyl end is homologous to a number of cytidyltransferases that also release pyrophosphate.
>PRK06973 nicotinic acid mononucleotide adenylyltransferase; Provisional
Back Show alignment and domain information
Probab=99.14 E-value=3.6e-10 Score=84.41 Aligned_cols=57 Identities=23% Similarity=0.206 Sum_probs=45.6
Q ss_pred ceEEEEecccCcCCHHHHHHHHHHHHcC--CeEEEEEecCcccccCCCCCCcCHHHHHHHHhh
Q psy11152 6 LLATSLQSNYDMVHFGHANNLRQAKELG--NYLVVGVHTDEEISKHKGPPVFTQQERYKMVRG 66 (112)
Q Consensus 6 ~~~v~~~G~FD~~H~GH~~ll~~a~~~~--~~lvv~v~~d~~~~~~k~~~i~s~~eR~~~l~~ 66 (112)
+++++++|+|||+|.||+.+.++|.+.. +++++..+.++ ..| ....+.++|++|++.
T Consensus 22 ~~IgifGGSFdPiH~GHl~ia~~~~~~l~ld~v~~iP~~~p---p~K-~~~~~~~~Rl~M~~l 80 (243)
T PRK06973 22 RRIGILGGTFDPIHDGHLALARRFADVLDLTELVLIPAGQP---WQK-ADVSAAEHRLAMTRA 80 (243)
T ss_pred ceEEEECCCCCCCcHHHHHHHHHHHHHcCCCEEEEEECCcC---CCC-CCCCCHHHHHHHHHH
Confidence 4688999999999999999999999874 66766665544 233 456799999999974
>TIGR00482 nicotinate (nicotinamide) nucleotide adenylyltransferase
Back Show alignment and domain information
Probab=99.10 E-value=2.4e-10 Score=82.20 Aligned_cols=63 Identities=16% Similarity=0.214 Sum_probs=45.8
Q ss_pred EEecccCcCCHHHHHHHHHHHHcC--CeEEEEEecCcccccCCC-CCCcCHHHHHHHHh-hccCCCEEEE
Q psy11152 10 SLQSNYDMVHFGHANNLRQAKELG--NYLVVGVHTDEEISKHKG-PPVFTQQERYKMVR-GIKWVDEVVE 75 (112)
Q Consensus 10 ~~~G~FD~~H~GH~~ll~~a~~~~--~~lvv~v~~d~~~~~~k~-~~i~s~~eR~~~l~-~~~~vd~vi~ 75 (112)
+++|+|||+|.||+.++++|.+.. +++.+..+..+. .|. ....+.++|++|++ ++++.+.+.+
T Consensus 1 i~gGsFdP~H~GHl~l~~~a~~~~~~d~v~~~p~~~~p---~k~~~~~~~~~~R~~m~~~a~~~~~~~~v 67 (193)
T TIGR00482 1 LFGGSFDPIHYGHLLLAEEALDHLDLDKVIFVPTANPP---HKKTYEAASSHHRLAMLKLAIEDNPKFEV 67 (193)
T ss_pred CccccCCccCHHHHHHHHHHHHHcCCCEEEEEeCCCCC---CCCCCCCCCHHHHHHHHHHHHhcCCCEEE
Confidence 357999999999999999999885 566666555442 232 24579999999998 4455555444
This model represents the predominant bacterial/eukaryotic adenylyltransferase for nicotinamide-nucleotide, its deamido form nicotinate nucleotide, or both. The first activity, nicotinamide-nucleotide adenylyltransferase (EC 2.7.7.1), synthesizes NAD by the salvage pathway, while the second, nicotinate-nucleotide adenylyltransferase (EC 2.7.7.18) synthesizes the immediate precursor of NAD by the de novo pathway. In E. coli, NadD activity is biased toward the de novo pathway while salvage activity is channeled through the multifunctional NadR protein, but this division of labor may be exceptional. The given name of this model, nicotinate (nicotinamide) nucleotide adenylyltransferase, reflects the lack of absolute specificity with respect to substrate amidation state in most species.
>PRK07152 nadD putative nicotinate-nucleotide adenylyltransferase; Validated
Back Show alignment and domain information
Probab=99.07 E-value=5.6e-10 Score=86.61 Aligned_cols=92 Identities=14% Similarity=0.125 Sum_probs=59.7
Q ss_pred ceEEEEecccCcCCHHHHHHHHHHHHc--CCeEEEEEecCcccccCCCC-CCcCHHHHHHHHhh-ccCCCEEEEcCCC--
Q psy11152 6 LLATSLQSNYDMVHFGHANNLRQAKEL--GNYLVVGVHTDEEISKHKGP-PVFTQQERYKMVRG-IKWVDEVVEGAPY-- 79 (112)
Q Consensus 6 ~~~v~~~G~FD~~H~GH~~ll~~a~~~--~~~lvv~v~~d~~~~~~k~~-~i~s~~eR~~~l~~-~~~vd~vi~~~~~-- 79 (112)
|++++++|+|||+|.||+.++++|.+. .+++++.++..+ +.|.. ...+.++|++|++. +++.+.+.+.+-+
T Consensus 1 m~i~i~gGsFdP~H~GHl~la~~a~~~~~~d~v~~~p~~~~---p~K~~~~~~~~~~R~~m~~~a~~~~~~~~v~~~E~~ 77 (342)
T PRK07152 1 MKIAIFGGSFDPIHKGHINIAKKAIKKLKLDKLFFVPTYIN---PFKKKQKASNGEHRLNMLKLALKNLPKMEVSDFEIK 77 (342)
T ss_pred CeEEEEeeCCCCcCHHHHHHHHHHHHHhCCCEEEEEeCCCC---CCCCCCCCCCHHHHHHHHHHHHhhCCCeEEeHHHHh
Confidence 358899999999999999999999987 467777665543 23333 45556999999964 3444554441100
Q ss_pred ----C---CHHHHHHhcCCC---EEEEcCCC
Q psy11152 80 ----V---TTLETLDAYDCD---FCVHGALE 100 (112)
Q Consensus 80 ----~---~~~~fi~~l~~~---~iv~G~D~ 100 (112)
. .+.+.+++.-++ ++++|.|.
T Consensus 78 ~~~~syt~~tl~~l~~~~p~~~~~~iiG~D~ 108 (342)
T PRK07152 78 RQNVSYTIDTIKYFKKKYPNDEIYFIIGSDN 108 (342)
T ss_pred CCCCCcHHHHHHHHHHhCCCCcEEEEecHHH
Confidence 1 122233433344 88999884
>COG1056 NadR Nicotinamide mononucleotide adenylyltransferase [Coenzyme metabolism]
Back Show alignment and domain information
Probab=99.04 E-value=5.3e-10 Score=79.61 Aligned_cols=60 Identities=22% Similarity=0.303 Sum_probs=49.9
Q ss_pred CceEEEEecccCcCCHHHHHHHHHHHHcCCeEEEEEecCcccccCCCCCCcCHHHHHHHHhh
Q psy11152 5 NLLATSLQSNYDMVHFGHANNLRQAKELGNYLVVGVHTDEEISKHKGPPVFTQQERYKMVRG 66 (112)
Q Consensus 5 ~~~~v~~~G~FD~~H~GH~~ll~~a~~~~~~lvv~v~~d~~~~~~k~~~i~s~~eR~~~l~~ 66 (112)
++..++++|.|.|+|.||+++|+.|.+..|+|+|++.++......+ -.+|..||..++++
T Consensus 2 ~~~rgv~~GRFqP~H~GHl~vi~~al~~vDeliI~iGSa~~~~t~~--nPfTagER~~mi~~ 61 (172)
T COG1056 2 RMKRGVYFGRFQPLHTGHLYVIKRALSKVDELIIVIGSAQESHTLK--NPFTAGERIPMIRD 61 (172)
T ss_pred CceEEEEEeccCCccHhHHHHHHHHHHhCCEEEEEEccCccccccc--CCCCccchhHHHHH
Confidence 4678999999999999999999999999999999999876432222 25788999998873
>PRK08887 nicotinic acid mononucleotide adenylyltransferase; Provisional
Back Show alignment and domain information
Probab=98.98 E-value=1.8e-09 Score=76.79 Aligned_cols=56 Identities=9% Similarity=0.156 Sum_probs=43.0
Q ss_pred eEEEEecccCcCCHHHHHHHHHHHHcCCeEEEEEecCcccccCCCCCCcCHHHHHHHHhhc
Q psy11152 7 LATSLQSNYDMVHFGHANNLRQAKELGNYLVVGVHTDEEISKHKGPPVFTQQERYKMVRGI 67 (112)
Q Consensus 7 ~~v~~~G~FD~~H~GH~~ll~~a~~~~~~lvv~v~~d~~~~~~k~~~i~s~~eR~~~l~~~ 67 (112)
++++++|+|||+|.||+.+++++ +..+++++.++... +.+. +..+.++|++|++..
T Consensus 3 ~i~ifGGSFDP~H~GHl~ia~~~-~~~d~v~~vP~~~~---~~~k-~~~~~~~R~~M~~~a 58 (174)
T PRK08887 3 KIAVFGSAFNPPSLGHKSVIESL-SHFDLVLLVPSIAH---AWGK-TMLDYETRCQLVDAF 58 (174)
T ss_pred eEEEeCCCCCCCCHHHHHHHHHh-hcCCEEEEEECCCC---cccC-CCCCHHHHHHHHHHH
Confidence 58899999999999999999985 45687777655421 1122 567999999999854
>PF05636 HIGH_NTase1: HIGH Nucleotidyl Transferase; InterPro: IPR008513 This family consists of several bacterial proteins of unknown function
Back Show alignment and domain information
Probab=98.89 E-value=4.4e-09 Score=83.24 Aligned_cols=92 Identities=21% Similarity=0.317 Sum_probs=40.0
Q ss_pred ceEEEEecccCcCCHHHHHHHHHHHHcC-CeEEEEEecCcccccCCCC-CCcCHHHHHHHHhhccCCCEEEEcC-CC--C
Q psy11152 6 LLATSLQSNYDMVHFGHANNLRQAKELG-NYLVVGVHTDEEISKHKGP-PVFTQQERYKMVRGIKWVDEVVEGA-PY--V 80 (112)
Q Consensus 6 ~~~v~~~G~FD~~H~GH~~ll~~a~~~~-~~lvv~v~~d~~~~~~k~~-~i~s~~eR~~~l~~~~~vd~vi~~~-~~--~ 80 (112)
|+++-++-=|.|||.||+..|+++++.. ...+|+|.+..++. +|. .+++...|.++.-.+ |+|.|++.. .+ .
T Consensus 1 Mk~~GIIaEYNPFHnGH~y~i~~~k~~~~ad~ii~vMSGnFvQ--RGEPAi~dKw~RA~~AL~~-GaDLViELP~~~a~q 77 (388)
T PF05636_consen 1 MKVVGIIAEYNPFHNGHLYQIEQAKKITGADVIIAVMSGNFVQ--RGEPAIIDKWTRAEMALKN-GADLVIELPVVYALQ 77 (388)
T ss_dssp ------E---TT--HHHHHHHHHHH---TSSEEEEEE--TTSB--TSSB-SS-HHHHHHHHHHH-T-SEEEE---G----
T ss_pred CCCCCeEEeECCccHHHHHHHHHHhccCCCCEEEEEECCCccc--CCCeeeCCHHHHHHHHHHc-CCCEEEECCCccccc
Confidence 3456666789999999999999999873 33566676666654 344 799999999999999 899999831 11 3
Q ss_pred CHHHH-------HHhcCCCEEEEcCCC
Q psy11152 81 TTLET-------LDAYDCDFCVHGALE 100 (112)
Q Consensus 81 ~~~~f-------i~~l~~~~iv~G~D~ 100 (112)
+++.| +.++++|+++.|.+.
T Consensus 78 sA~~FA~gaV~lL~~lgvd~l~FGsE~ 104 (388)
T PF05636_consen 78 SAEYFARGAVSLLNALGVDYLSFGSES 104 (388)
T ss_dssp ---------------------------
T ss_pred ccccccccccccccccccccccccccc
Confidence 45555 367899999999775
>TIGR00018 panC pantoate--beta-alanine ligase
Back Show alignment and domain information
Probab=98.85 E-value=1e-08 Score=78.14 Aligned_cols=64 Identities=19% Similarity=0.169 Sum_probs=53.2
Q ss_pred EEEecccCcCCHHHHHHHHHHHHcCCeEEEEEecCccc-cc-CCCC-CCcCHHHHHHHHhhccCCCEEEEc
Q psy11152 9 TSLQSNYDMVHFGHANNLRQAKELGNYLVVGVHTDEEI-SK-HKGP-PVFTQQERYKMVRGIKWVDEVVEG 76 (112)
Q Consensus 9 v~~~G~FD~~H~GH~~ll~~a~~~~~~lvv~v~~d~~~-~~-~k~~-~i~s~~eR~~~l~~~~~vd~vi~~ 76 (112)
|.++|+ +|.||++||++|++.++.+++++..+|.. .+ .... .+.|.++|.++++++ |||.++..
T Consensus 27 VpTmG~---LH~GH~~LI~~a~~~a~~vVvTffvnP~qf~~~ed~~~yp~tle~d~~ll~~~-GVD~vf~P 93 (282)
T TIGR00018 27 VPTMGN---LHDGHMSLIDRAVAENDVVVVSIFVNPMQFGPNEDLEAYPRTLEEDCALLEKL-GVDVVFAP 93 (282)
T ss_pred EECCCc---ccHHHHHHHHHHHHhCCeEEEEecCChHHhCCccccccCCCCHHHHHHHHHHc-CCCEEECC
Confidence 568999 99999999999999999889999888853 22 2212 688999999999999 89988763
This family is pantoate--beta-alanine ligase, the last enzyme of pantothenate biosynthesis.
>PLN02660 pantoate--beta-alanine ligase
Back Show alignment and domain information
Probab=98.83 E-value=1.3e-08 Score=77.63 Aligned_cols=65 Identities=15% Similarity=0.157 Sum_probs=53.8
Q ss_pred EEEEecccCcCCHHHHHHHHHHHHcCCeEEEEEecCccc-ccCCC-C-CCcCHHHHHHHHhhccCCCEEEEc
Q psy11152 8 ATSLQSNYDMVHFGHANNLRQAKELGNYLVVGVHTDEEI-SKHKG-P-PVFTQQERYKMVRGIKWVDEVVEG 76 (112)
Q Consensus 8 ~v~~~G~FD~~H~GH~~ll~~a~~~~~~lvv~v~~d~~~-~~~k~-~-~i~s~~eR~~~l~~~~~vd~vi~~ 76 (112)
-|.++|+ +|.||++||++|++.++.+++++..+|.. .+... . .+.|.++|.++++++ |||.++..
T Consensus 25 fVpTmG~---LH~GH~~LI~~a~~~a~~vVvTffvnP~qf~~~ed~~~yp~tle~d~~ll~~~-GVD~vf~P 92 (284)
T PLN02660 25 LVPTMGY---LHEGHLSLVRAARARADVVVVSIYVNPGQFAPGEDLDTYPRDFDGDLRKLAAL-GVDAVFNP 92 (284)
T ss_pred EEEcCch---hhHHHHHHHHHHHHhCCEEEEEEeCChHHcCCccccccCCCCHHHHHHHHHHc-CCCEEECC
Confidence 3688999 99999999999999999889999888853 22122 2 689999999999999 89988753
>cd09286 NMNAT_Eukarya Nicotinamide/nicotinate mononucleotide adenylyltransferase, Eukaryotic
Back Show alignment and domain information
Probab=98.80 E-value=2.2e-08 Score=73.92 Aligned_cols=66 Identities=15% Similarity=0.075 Sum_probs=43.1
Q ss_pred EEEecccCcCCHHHHHHHHHHHHcCC--e-E-EEEEecCccc-ccCCCCCCcCHHHHHHHHh-hccCCCEEEE
Q psy11152 9 TSLQSNYDMVHFGHANNLRQAKELGN--Y-L-VVGVHTDEEI-SKHKGPPVFTQQERYKMVR-GIKWVDEVVE 75 (112)
Q Consensus 9 v~~~G~FD~~H~GH~~ll~~a~~~~~--~-l-vv~v~~d~~~-~~~k~~~i~s~~eR~~~l~-~~~~vd~vi~ 75 (112)
.++.|+|||+|.||+.++++|.+..+ . + ++.....|.- +..| ....+.++|++|++ ++...+.+.+
T Consensus 3 ~~~gGSFdPiH~gHl~ia~~a~~~l~~~~~~~~v~~~~~P~~~~~~k-~~~~~~~~Rl~Ml~lai~~~~~~~v 74 (225)
T cd09286 3 LLACGSFNPITNMHLRMFELARDHLHETGRYEVVGGIISPVNDAYGK-KGLASAKHRVAMCRLAVQSSDWIRV 74 (225)
T ss_pred EEeCcCcCCCcHHHHHHHHHHHHHHHhhcCceeEEEEEEeeccCCCC-CCCCCHHHHHHHHHHHHccCCCEEE
Confidence 57889999999999999999988753 2 1 2221111211 1122 45779999999997 4544555444
Nicotinamide/nicotinate mononucleotide (NMN/ NaMN)adenylyltransferase (NMNAT). NMNAT represents the primary bacterial and eukaryotic adenylyltransferases for nicotinamide-nucleotide and for the deamido form, nicotinate nucleotide. It is an indispensable enzyme in the biosynthesis of NAD(+) and NADP(+). Nicotinamide-nucleotide adenylyltransferase synthesizes NAD via the salvage pathway, while nicotinate-nucleotide adenylyltransferase synthesizes the immediate precursor of NAD via the de novo pathway. Human NMNAT displays unique dual substrate specificity toward both NMN and NaMN, and can participate in both de novo and salvage pathways of NAD synthesis. This subfamily consists strictly of eukaryotic members and includes secondary structural elements not found in all NMNATs.
>PLN02945 nicotinamide-nucleotide adenylyltransferase/nicotinate-nucleotide adenylyltransferase
Back Show alignment and domain information
Probab=98.62 E-value=1.5e-07 Score=69.85 Aligned_cols=65 Identities=12% Similarity=0.061 Sum_probs=42.0
Q ss_pred EEEEecccCcCCHHHHHHHHHHHHcC--Ce-EEEEEecCcccccCCCCCCcCHHHHHHHHh-hccCCCE
Q psy11152 8 ATSLQSNYDMVHFGHANNLRQAKELG--NY-LVVGVHTDEEISKHKGPPVFTQQERYKMVR-GIKWVDE 72 (112)
Q Consensus 8 ~v~~~G~FD~~H~GH~~ll~~a~~~~--~~-lvv~v~~d~~~~~~k~~~i~s~~eR~~~l~-~~~~vd~ 72 (112)
..+.+|+|||+|.||+.+++.|.+.- +. .+|.+...|.-.+.+.....+.++|++|++ ++.+...
T Consensus 24 v~i~GGSFdP~H~gHl~ia~~a~~~l~~d~~~~v~~~~~P~~~~~~k~~~~~~~~Rl~Ml~lai~~~~~ 92 (236)
T PLN02945 24 VLVATGSFNPPTYMHLRMFELARDALMSEGYHVLGGYMSPVNDAYKKKGLASAEHRIQMCQLACEDSDF 92 (236)
T ss_pred EEEEcCCCCCCcHHHHHHHHHHHHHHhhcCcEEEEEEECCCCcccccCCCCCHHHHHHHHHHHhcCCCC
Confidence 34777899999999999999888763 33 234333333211112235679999999997 4444433
>KOG3351|consensus
Back Show alignment and domain information
Probab=98.55 E-value=5.1e-08 Score=72.97 Aligned_cols=61 Identities=33% Similarity=0.398 Sum_probs=51.1
Q ss_pred eEEEEecccCcCCHHHHHHHHHHHHcC-CeEEEEEecCcccccCCCC-CCcCHHHHHHHHhhc
Q psy11152 7 LATSLQSNYDMVHFGHANNLRQAKELG-NYLVVGVHTDEEISKHKGP-PVFTQQERYKMVRGI 67 (112)
Q Consensus 7 ~~v~~~G~FD~~H~GH~~ll~~a~~~~-~~lvv~v~~d~~~~~~k~~-~i~s~~eR~~~l~~~ 67 (112)
..++.+|+||-+|.||.-+|..|..++ ++++||++.++.+.++.-+ .+.+.++|.+-+.++
T Consensus 143 ~~~alGGTFDrLH~gHKvLLs~aa~la~~~lVvGV~d~elL~kK~~~Eliepie~R~~~V~~F 205 (293)
T KOG3351|consen 143 MVVALGGTFDRLHDGHKVLLSVAAELASDRLVVGVTDDELLKKKVLKELIEPIEERKEHVSNF 205 (293)
T ss_pred eeEEeccchhhhccchHHHHHHHHHHhhceEEEEecChHHHHHhHHHHHhhhHHHHHHHHHHH
Confidence 568999999999999999999999997 6899999999877543333 799999999976653
>COG1323 Predicted nucleotidyltransferase [General function prediction only]
Back Show alignment and domain information
Probab=98.50 E-value=4.8e-07 Score=70.99 Aligned_cols=90 Identities=21% Similarity=0.182 Sum_probs=63.0
Q ss_pred EEEEecccCcCCHHHHHHHHHHHHcC-CeEEEEEecCcccccCCCC-CCcCHHHHHHHHhhccCCCEEEEcCCC--CCHH
Q psy11152 8 ATSLQSNYDMVHFGHANNLRQAKELG-NYLVVGVHTDEEISKHKGP-PVFTQQERYKMVRGIKWVDEVVEGAPY--VTTL 83 (112)
Q Consensus 8 ~v~~~G~FD~~H~GH~~ll~~a~~~~-~~lvv~v~~d~~~~~~k~~-~i~s~~eR~~~l~~~~~vd~vi~~~~~--~~~~ 83 (112)
.+=++--|||||.||+.+|++|.+++ ...++.+-+-.+.. +++ ++.+..+|.++..+. |+|.||+..-. ..+.
T Consensus 3 ~~Gii~eyNPfHnGH~y~i~~Ar~~~~~d~~i~~msgdf~q--Rgepai~~k~~r~~~aL~~-g~D~VIelP~~~s~q~a 79 (358)
T COG1323 3 SIGIIAEYNPFHNGHQYHINKAREEFKGDEIIAVMSGDFTQ--RGEPAIGHKWERKKMALEG-GADLVIELPLERSGQGA 79 (358)
T ss_pred ceeeeeecCcccccHHHHHHHHHHhccCCceEEeeecchhh--cCCCccccHHHHHhhhhhc-CceEEEEcceEEecCCC
Confidence 44455689999999999999999853 34445444444443 344 799999999999998 79999973111 2222
Q ss_pred H-H-------HHhcCCCEEEEcCCC
Q psy11152 84 E-T-------LDAYDCDFCVHGALE 100 (112)
Q Consensus 84 ~-f-------i~~l~~~~iv~G~D~ 100 (112)
+ | +..++++.|+.|..-
T Consensus 80 ~~fa~~av~il~~l~~~~i~fgse~ 104 (358)
T COG1323 80 PYFATRAVRILNALGGDDIAFGSPP 104 (358)
T ss_pred chhhHHHHHHHHhcCCCeEEEeCCC
Confidence 2 2 356889988887653
>PF08218 Citrate_ly_lig: Citrate lyase ligase C-terminal domain; InterPro: IPR013166 [Citrate (pro-3S)-lyase] ligase (6
Back Show alignment and domain information
Probab=98.08 E-value=4.4e-05 Score=54.77 Aligned_cols=56 Identities=23% Similarity=0.334 Sum_probs=43.4
Q ss_pred cccCcCCHHHHHHHHHHHHcCCeEEEEEecCcccccCCCCCCcCHHHHHHHHhh-ccCCCEEEE
Q psy11152 13 SNYDMVHFGHANNLRQAKELGNYLVVGVHTDEEISKHKGPPVFTQQERYKMVRG-IKWVDEVVE 75 (112)
Q Consensus 13 G~FD~~H~GH~~ll~~a~~~~~~lvv~v~~d~~~~~~k~~~i~s~~eR~~~l~~-~~~vd~vi~ 75 (112)
-+=.||++||+.|+++|.+.+|.+.|-+-.+. ..++|.++|++++++ ++..++|.+
T Consensus 6 MNaNPFT~GH~yLiE~Aa~~~d~l~vFVV~eD-------~S~Fpf~~R~~LVk~G~~~L~NV~V 62 (182)
T PF08218_consen 6 MNANPFTLGHRYLIEQAAKECDWLHVFVVSED-------RSLFPFADRYELVKEGTADLPNVTV 62 (182)
T ss_pred EcCCCCccHHHHHHHHHHHhCCEEEEEEEccc-------cCcCCHHHHHHHHHHHhCcCCCEEE
Confidence 46689999999999999999999866555432 247899999999974 455566554
2.1.22 from EC), also known as citrate lyase ligase, is responsible for acetylation of the prosthetic group (2-(5''-phosphoribosyl)-3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase. It converts the inactive thiol form of the enzyme to the active form. In Clostridium sphenoides, citrate lyase ligase actively degrades citrate. In Clostridium sporosphaeroides and Lactococcus lactis, however, the enzyme is under stringent regulatory control. The enzyme's activity in anaerobic bacteria is modulated by phosphorylation and dephosphorylation []. The proteins in this entry represent the C-terminal domain of citrate lyase ligase.; GO: 0008771 [citrate (pro-3S)-lyase] ligase activity
>TIGR00339 sopT ATP sulphurylase
Back Show alignment and domain information
Probab=97.87 E-value=0.00019 Score=57.00 Aligned_cols=92 Identities=13% Similarity=0.062 Sum_probs=62.1
Q ss_pred eEEEEecccCcCCHHHHHHHHHHHHc--CCeEEEEEecCcccccCCCCCCcCHHHHHHHHhhc-cCC---CEEEE-cCCC
Q psy11152 7 LATSLQSNYDMVHFGHANNLRQAKEL--GNYLVVGVHTDEEISKHKGPPVFTQQERYKMVRGI-KWV---DEVVE-GAPY 79 (112)
Q Consensus 7 ~~v~~~G~FD~~H~GH~~ll~~a~~~--~~~lvv~v~~d~~~~~~k~~~i~s~~eR~~~l~~~-~~v---d~vi~-~~~~ 79 (112)
++|++.=+|||+|+||..+++.|.+. ++.+++.....+. | +-..+.+.|+++++.+ .+. +.+++ ..+.
T Consensus 184 ~~Vvafqt~nPiHr~H~~l~~~a~e~l~~d~lll~P~~g~~----k-~~~~~~~~R~~~~~~~~~~~~~~~~~~l~~~~~ 258 (383)
T TIGR00339 184 DTVVAFQTRNPMHRAHEELTKRAARSLPNAGVLVHPLVGLT----K-PGDIPAEVRMRAYEVLKEGYPNPERVMLTFLPL 258 (383)
T ss_pred CeEEEeccCCCCchHHHHHHHHHHHHcCCCeEEEEeCCCCC----C-CCCCCHHHHHHHHHHHHhhCCCCCceEEEecch
Confidence 56788899999999999999999997 6766665544321 2 2468899999998865 222 12322 2122
Q ss_pred ----CCHHHH------HHhcCCCEEEEcCCCCCC
Q psy11152 80 ----VTTLET------LDAYDCDFCVHGALEVLV 103 (112)
Q Consensus 80 ----~~~~~f------i~~l~~~~iv~G~D~~f~ 103 (112)
-.+.+- -+++++.++++|.|..-.
T Consensus 259 em~~agpreall~Aiir~nyG~th~IiG~Dhag~ 292 (383)
T TIGR00339 259 AMRYAGPREAIWHAIIRKNYGATHFIVGRDHAGP 292 (383)
T ss_pred HhhcCCcHHHHHHHHHHHHCCCCEEEECCCCCCC
Confidence 122232 267999999999997543
Members of this family also include the dissimilatory sulfate adenylyltransferase (sat) of the sulfate reducer Archaeoglobus fulgidus.
>COG3053 CitC Citrate lyase synthetase [Energy production and conversion]
Back Show alignment and domain information
Probab=97.74 E-value=0.00025 Score=54.65 Aligned_cols=65 Identities=17% Similarity=0.215 Sum_probs=49.0
Q ss_pred CCceEEEEecccCcCCHHHHHHHHHHHHcCCeEEEEEecCcccccCCCCCCcCHHHHHHHHhh-ccCCCEEEE
Q psy11152 4 LNLLATSLQSNYDMVHFGHANNLRQAKELGNYLVVGVHTDEEISKHKGPPVFTQQERYKMVRG-IKWVDEVVE 75 (112)
Q Consensus 4 ~~~~~v~~~G~FD~~H~GH~~ll~~a~~~~~~lvv~v~~d~~~~~~k~~~i~s~~eR~~~l~~-~~~vd~vi~ 75 (112)
...+++.+.-+=.||.+||+.|++||.+.||-+-+-+.++. ..++|.++|.+++++ +.++++|.+
T Consensus 143 ~gkkIgaIVMNANPFTLGH~YLVEqAaaqcDwlHLFvV~eD-------~S~f~y~~R~~Lv~~G~~~l~Nvt~ 208 (352)
T COG3053 143 PGKKIGAIVMNANPFTLGHRYLVEQAAAQCDWLHLFVVKED-------SSLFPYEDRLDLVKKGTADLPNVTV 208 (352)
T ss_pred CCCeeEEEEEeCCCccchhHHHHHHHHhhCCEEEEEEEecc-------cccCCHHHHHHHHHHhhccCCceEE
Confidence 34577888889999999999999999999998755443322 247899999999864 555655443
>PRK13477 bifunctional pantoate ligase/cytidylate kinase; Provisional
Back Show alignment and domain information
Probab=97.54 E-value=0.00023 Score=58.48 Aligned_cols=68 Identities=13% Similarity=0.202 Sum_probs=51.0
Q ss_pred EEEEecccCcCCHHHHHHHHHHHHcCCeEEEEEecCccc-ccCCC--CCCcCHHHHHHHHhhccCCCEEEEc
Q psy11152 8 ATSLQSNYDMVHFGHANNLRQAKELGNYLVVGVHTDEEI-SKHKG--PPVFTQQERYKMVRGIKWVDEVVEG 76 (112)
Q Consensus 8 ~v~~~G~FD~~H~GH~~ll~~a~~~~~~lvv~v~~d~~~-~~~k~--~~i~s~~eR~~~l~~~~~vd~vi~~ 76 (112)
++-+.-|==.+|-||+.|+++|++.++.+||++..+|.- .+... ...-++++=.+++++. |||.|+..
T Consensus 21 ~ig~VPTMG~LH~GHlsLi~~A~~~~d~vVvSIFVNP~QF~~~eD~~~YPr~~~~D~~~l~~~-gvd~vf~P 91 (512)
T PRK13477 21 TIGFVPTMGALHQGHLSLIRRARQENDVVLVSIFVNPLQFGPNEDLERYPRTLEADRELCESA-GVDAIFAP 91 (512)
T ss_pred cEEEECCCcchhHHHHHHHHHHHHhCCEEEEEEccCcccCCCchhhhhCCCCHHHHHHHHHhc-CCCEEECC
Confidence 344445667899999999999999999999999887742 22211 2456778888899999 89987653
>PF02569 Pantoate_ligase: Pantoate-beta-alanine ligase; InterPro: IPR003721 D-Pantothenate is synthesized via four enzymes from ketoisovalerate, which is an intermediate of branched-chain amino acid synthesis []
Back Show alignment and domain information
Probab=97.52 E-value=0.00045 Score=52.80 Aligned_cols=62 Identities=18% Similarity=0.249 Sum_probs=39.2
Q ss_pred cccCcCCHHHHHHHHHHHHcCCeEEEEEecCccc-ccCC--CCCCcCHHHHHHHHhhccCCCEEEE
Q psy11152 13 SNYDMVHFGHANNLRQAKELGNYLVVGVHTDEEI-SKHK--GPPVFTQQERYKMVRGIKWVDEVVE 75 (112)
Q Consensus 13 G~FD~~H~GH~~ll~~a~~~~~~lvv~v~~d~~~-~~~k--~~~i~s~~eR~~~l~~~~~vd~vi~ 75 (112)
-|==.+|-||+.|+++|++.++.++|++..+|.- .+.. ....-+.+.=++++++. |||.++.
T Consensus 28 PTMGaLHeGHlsLi~~A~~~~d~vVVSIFVNP~QF~~~eD~~~YPR~~e~D~~ll~~~-gvD~vF~ 92 (280)
T PF02569_consen 28 PTMGALHEGHLSLIRRARAENDVVVVSIFVNPTQFGPNEDFDKYPRTLERDLELLEKA-GVDAVFA 92 (280)
T ss_dssp EE-SS--HHHHHHHHHHHHHSSEEEEEE---GGGSSTTSHTTTS---HHHHHHHHHHT-T-SEEE-
T ss_pred CCCchhhHHHHHHHHHHHhCCCEEEEEECcCcccCCCcchhhhCCCChHHHHHHHhcc-CCCEEEc
Confidence 3445679999999999999999999999888852 2211 12456677778899999 8998764
Pantoate-beta-alanine ligase, also know as pantothenate synthase, (6.3.2.1 from EC) catalyzes the formation of pantothenate from pantoate and alanine in the pantothenate biosynthesis pathway [].; GO: 0004592 pantoate-beta-alanine ligase activity, 0015940 pantothenate biosynthetic process; PDB: 3MUE_C 1V8F_B 1UFV_A 2X3F_B 1MOP_A 3COY_B 3IOC_A 1N2E_A 3IVX_A 1N2H_A ....
>COG0414 PanC Panthothenate synthetase [Coenzyme metabolism]
Back Show alignment and domain information
Probab=97.17 E-value=0.0024 Score=48.74 Aligned_cols=62 Identities=19% Similarity=0.204 Sum_probs=46.8
Q ss_pred cccCcCCHHHHHHHHHHHHcCCeEEEEEecCccc-ccCC--CCCCcCHHHHHHHHhhccCCCEEEE
Q psy11152 13 SNYDMVHFGHANNLRQAKELGNYLVVGVHTDEEI-SKHK--GPPVFTQQERYKMVRGIKWVDEVVE 75 (112)
Q Consensus 13 G~FD~~H~GH~~ll~~a~~~~~~lvv~v~~d~~~-~~~k--~~~i~s~~eR~~~l~~~~~vd~vi~ 75 (112)
=+--.+|-||+.|+++|++.++.+||++.-+|.- .++. ....-+++.=.+++++. |||.++.
T Consensus 28 PTMG~LH~GHlsLVr~A~~~~d~VVVSIFVNP~QFg~~EDl~~YPR~l~~D~~~le~~-gvd~vF~ 92 (285)
T COG0414 28 PTMGNLHEGHLSLVRRAKKENDVVVVSIFVNPLQFGPNEDLDRYPRTLERDLELLEKE-GVDIVFA 92 (285)
T ss_pred cCCcccchHHHHHHHHHhhcCCeEEEEEEeChhhcCCchhhhhCCCCHHHHHHHHHhc-CCcEEeC
Confidence 3666799999999999999999999998887742 1111 12456677777888888 7988774
>KOG3042|consensus
Back Show alignment and domain information
Probab=96.72 E-value=0.0036 Score=46.54 Aligned_cols=61 Identities=23% Similarity=0.291 Sum_probs=44.4
Q ss_pred ccCcCCHHHHHHHHHHHHcCCeEEEEEecCccc-cc-CC-CCCCcCHHHHHHHHhhccCCCEEEE
Q psy11152 14 NYDMVHFGHANNLRQAKELGNYLVVGVHTDEEI-SK-HK-GPPVFTQQERYKMVRGIKWVDEVVE 75 (112)
Q Consensus 14 ~FD~~H~GH~~ll~~a~~~~~~lvv~v~~d~~~-~~-~k-~~~i~s~~eR~~~l~~~~~vd~vi~ 75 (112)
+--.+|-||..|++++++..+..+|.+.-+|.- ++ .. ....-+..+-+..|+++ |+|.|+.
T Consensus 31 TMG~LHeGH~SLvrqs~~~~~~tVVSIfVNP~QF~pteDL~~YPrt~~~D~~~L~~L-gvdvvfa 94 (283)
T KOG3042|consen 31 TMGCLHEGHASLVRQSVKENTYTVVSIFVNPSQFAPTEDLDNYPRTLPDDIKLLESL-GVDVVFA 94 (283)
T ss_pred ccccccccHHHHHHHHHhhCceEEEEEEechhhcCChhHhhcCCccCccHHHHHHhc-CceEEEc
Confidence 556799999999999999999988888877742 11 11 11234455667889999 7987763
>COG2046 MET3 ATP sulfurylase (sulfate adenylyltransferase) [Inorganic ion transport and metabolism]
Back Show alignment and domain information
Probab=96.68 E-value=0.031 Score=44.41 Aligned_cols=93 Identities=16% Similarity=0.149 Sum_probs=60.0
Q ss_pred CceEEEEecccCcCCHHHHHHHHHHHHcCCeEEEEEecCcccccCCCCCCcCHHHHHHHHhhc---cC-CCEEEE-cCCC
Q psy11152 5 NLLATSLQSNYDMVHFGHANNLRQAKELGNYLVVGVHTDEEISKHKGPPVFTQQERYKMVRGI---KW-VDEVVE-GAPY 79 (112)
Q Consensus 5 ~~~~v~~~G~FD~~H~GH~~ll~~a~~~~~~lvv~v~~d~~~~~~k~~~i~s~~eR~~~l~~~---~~-vd~vi~-~~~~ 79 (112)
.-+++++.=+++++|+||-.+.+.|.+.++.|+|-.--.. .+.+ =.+.+-|.+..+.+ .+ -|.+++ +.++
T Consensus 182 gwk~vvafQTRNp~HraHEyl~K~Al~~vdgllv~plVG~---tk~g--D~~~e~rm~~ye~l~~~Yyp~dr~~Ls~~~~ 256 (397)
T COG2046 182 GWKTVVAFQTRNPPHRAHEYLQKRALEKVDGLLVHPLVGA---TKPG--DIPDEVRMEYYEALLKHYYPPDRVFLSVLPA 256 (397)
T ss_pred CCeEEEEEecCCCchHHHHHHHHHHHHhcCcEEEEeeecc---ccCC--CchHHHHHHHHHHHHHhCCCCCcEEEEecHH
Confidence 3578999999999999999999999999986444221111 0111 24566676655443 13 355555 4444
Q ss_pred ----CCHHHH-----H-HhcCCCEEEEcCCCCC
Q psy11152 80 ----VTTLET-----L-DAYDCDFCVHGALEVL 102 (112)
Q Consensus 80 ----~~~~~f-----i-~~l~~~~iv~G~D~~f 102 (112)
-.|.|- + ++++|..+++|-|+.-
T Consensus 257 aMRyagPrEa~~HaIIRkNyGcTHfIVGRDHAG 289 (397)
T COG2046 257 AMRYAGPREALLHAIIRKNYGCTHFIVGRDHAG 289 (397)
T ss_pred HhhhcCcHHHHHHHHHHhhcCCeeeeecCCCCC
Confidence 123331 2 6799999999999873
>cd00517 ATPS ATP-sulfurylase
Back Show alignment and domain information
Probab=96.48 E-value=0.055 Score=42.70 Aligned_cols=92 Identities=14% Similarity=0.142 Sum_probs=59.0
Q ss_pred eEEEEecccCcCCHHHHHHHHHHHHcC--CeEEEEEecCcccccCCCCCCcCHHHHHHHHhhc--cCC--CEEEE-cCCC
Q psy11152 7 LATSLQSNYDMVHFGHANNLRQAKELG--NYLVVGVHTDEEISKHKGPPVFTQQERYKMVRGI--KWV--DEVVE-GAPY 79 (112)
Q Consensus 7 ~~v~~~G~FD~~H~GH~~ll~~a~~~~--~~lvv~v~~d~~~~~~k~~~i~s~~eR~~~l~~~--~~v--d~vi~-~~~~ 79 (112)
++|++.=+-+++|+||..+++.|.+.+ +.+++-..--. +.+-=.+.+-|.+..+.+ .+. +.+++ .-+.
T Consensus 157 ~~VvafqtrnP~HraHe~l~~~a~~~~~~~~lll~plvG~-----~k~~d~~~~~r~~~~~~l~~~y~~~~~~~l~~lp~ 231 (353)
T cd00517 157 RRVVAFQTRNPMHRAHEELMKRAAEKLLNDGLLLHPLVGW-----TKPGDVPDEVRMRAYEALLEEYYLPERTVLAILPL 231 (353)
T ss_pred CeEEEeecCCCCchhhHHHHHHHHHHcCCCcEEEEeccCC-----CCCCCCCHHHHHHHHHHHHHhCCCCCcEEEEeccc
Confidence 467778899999999999999999987 43333221111 112246788888877665 233 44444 2122
Q ss_pred ----CCHHHH-----H-HhcCCCEEEEcCCCCCC
Q psy11152 80 ----VTTLET-----L-DAYDCDFCVHGALEVLV 103 (112)
Q Consensus 80 ----~~~~~f-----i-~~l~~~~iv~G~D~~f~ 103 (112)
-.|.|- + ++++|..+++|.|+.-.
T Consensus 232 ~mryAGPrEallhAiirkN~GcThfIvGrDHAG~ 265 (353)
T cd00517 232 PMRYAGPREALWHAIIRKNYGATHFIVGRDHAGV 265 (353)
T ss_pred hhcccCcHHHHHHHHHHHhCCCCeEEECCCCCCC
Confidence 133332 2 67999999999998644
ATP-sulfurylase (ATPS), also known as sulfate adenylate transferase, catalyzes the transfer of an adenylyl group from ATP to sulfate, forming adenosine 5'-phosphosulfate (APS). This reaction is generally accompanied by a further reaction, catalyzed by APS kinase, in which APS is phosphorylated to yield 3'-phospho-APS (PAPS). In some organisms the APS kinase is a separate protein, while in others it is incorporated with ATP sulfurylase in a bifunctional enzyme that catalyzes both reactions. In bifunctional proteins, the domain that performs the kinase activity can be attached at the N-terminal end of the sulfurylase unit or at the C-terminal end, depending on the organism. While the reaction is ubiquitous among organisms, the physiological role of the reaction varies. In some organisms it is used to generate APS from sulfate and ATP, while in others it proceeds in the opposite direction to generate ATP from APS and pyrophosphate. ATP sulfurylase can be
>PRK04149 sat sulfate adenylyltransferase; Reviewed
Back Show alignment and domain information
Probab=96.36 E-value=0.048 Score=43.58 Aligned_cols=90 Identities=17% Similarity=0.180 Sum_probs=58.2
Q ss_pred eEEEEecccCcCCHHHHHHHHHHHHcCCeEEEEEecCcccccCCCCCCcCHHHHHHHHhhc-c-C--CCEEEE-cCCC--
Q psy11152 7 LATSLQSNYDMVHFGHANNLRQAKELGNYLVVGVHTDEEISKHKGPPVFTQQERYKMVRGI-K-W--VDEVVE-GAPY-- 79 (112)
Q Consensus 7 ~~v~~~G~FD~~H~GH~~ll~~a~~~~~~lvv~v~~d~~~~~~k~~~i~s~~eR~~~l~~~-~-~--vd~vi~-~~~~-- 79 (112)
++|++.=+-+++|+||..|.+.|.+.++.+++-..--. +.+--.+.+-|.+..+.+ . + -+.+++ .-+.
T Consensus 187 ~~VvafqTrnP~HraHe~l~~~a~e~~d~lll~plvG~-----~k~~di~~~~r~~~~~~~~~~y~p~~~v~l~~lp~~m 261 (391)
T PRK04149 187 KTVVAFQTRNPPHRAHEYLQKCALEIVDGLLLNPLVGE-----TKSGDIPAEVRMEAYEALLKNYYPKDRVLLSVTPAAM 261 (391)
T ss_pred CeEEEeecCCCCchHHHHHHHHHHHhcCeEEEecCcCC-----CCCCCCCHHHHHHHHHHHHHhcCCCCcEEEEeccchh
Confidence 56777889999999999999999999985444222111 112246788888877766 1 1 123333 1122
Q ss_pred --CCHHHH-----H-HhcCCCEEEEcCCCC
Q psy11152 80 --VTTLET-----L-DAYDCDFCVHGALEV 101 (112)
Q Consensus 80 --~~~~~f-----i-~~l~~~~iv~G~D~~ 101 (112)
-.|.|- + ++++|..+++|.|+.
T Consensus 262 ryAGPrEa~lhAivrkN~GcTh~IvGrDHA 291 (391)
T PRK04149 262 RYAGPREAIFHAIVRKNYGCTHFIVGRDHA 291 (391)
T ss_pred cccCcHHHHHHHHHHHhCCCCeEEECCCCC
Confidence 123332 1 689999999999974
>PF01747 ATP-sulfurylase: ATP-sulfurylase; InterPro: IPR002650 This entry consists of sulphate adenylyltransferase or ATP-sulfurylase (2
Back Show alignment and domain information
Probab=95.83 E-value=0.058 Score=39.80 Aligned_cols=92 Identities=18% Similarity=0.192 Sum_probs=53.4
Q ss_pred eEEEEecccCcCCHHHHHHHHHHHHcC-CeEEEEEecCcccccCCCCCCcCHHHHHHHHhhc-c---CCCEEEE-cCCC-
Q psy11152 7 LATSLQSNYDMVHFGHANNLRQAKELG-NYLVVGVHTDEEISKHKGPPVFTQQERYKMVRGI-K---WVDEVVE-GAPY- 79 (112)
Q Consensus 7 ~~v~~~G~FD~~H~GH~~ll~~a~~~~-~~lvv~v~~d~~~~~~k~~~i~s~~eR~~~l~~~-~---~vd~vi~-~~~~- 79 (112)
+.|++.=+=+++|++|..+++.|.+.+ +.|++-..-.+ .| +--.+.+-|.+..+.+ . --+.+++ .-+.
T Consensus 21 ~~VvafqtrnPlHraHe~l~~~a~e~~~~~lll~plvG~----~k-~~d~~~~~r~~~~~~~~~~y~p~~~v~l~~lp~~ 95 (215)
T PF01747_consen 21 RRVVAFQTRNPLHRAHEYLMRRALEKAGDGLLLHPLVGP----TK-PGDIPYEVRVRCYEALIDNYFPKNRVLLSPLPLP 95 (215)
T ss_dssp SSEEEEEESS---HHHHHHHHHHHHHHTSEEEEEEBESB-----S-TTSCCHHHHHHHHHHHHHHCSSTTGEEEEBBESB
T ss_pred CeEEEEEeCCCCCHHHHHHHHHHHHHhcCcEEEEeccCC----CC-cCCCCHHHHHHHHHHHHHHhCCCCcEEEeccCch
Confidence 456777789999999999999999986 65555332221 11 1246778888866654 1 1244444 1121
Q ss_pred ---CCHHHHH------HhcCCCEEEEcCCCCCC
Q psy11152 80 ---VTTLETL------DAYDCDFCVHGALEVLV 103 (112)
Q Consensus 80 ---~~~~~fi------~~l~~~~iv~G~D~~f~ 103 (112)
-.|.|-+ ++++|..+++|.|+.-.
T Consensus 96 mr~aGPrEallhAiirkN~GcTh~IvGrdhAg~ 128 (215)
T PF01747_consen 96 MRYAGPREALLHAIIRKNYGCTHFIVGRDHAGV 128 (215)
T ss_dssp ---SHHHHHHHHHHHHHHTT-SEEEE-TTTT-S
T ss_pred hcccCcHHHHHHHHHHHHCCCceEEeCCcCCCc
Confidence 2344422 68999999999998753
7.7.4 from EC) some of which are part of a bifunctional polypeptide chain associated with adenosyl phosphosulphate (APS) kinase, IPR002891 from INTERPRO. Both enzymes are required for PAPS (phosphoadenosine-phosphosulphate) synthesis from inorganic sulphate []. ATP sulfurylase catalyses the synthesis of adenosine-phosphosulphate APS from ATP and inorganic sulphate [].; GO: 0004781 sulfate adenylyltransferase (ATP) activity, 0000103 sulfate assimilation; PDB: 3CR8_B 1M8P_C 1I2D_B 1JHD_A 1V47_B 1X6V_B 1XNJ_A 1XJQ_B 2QJF_A 2GKS_B ....
>PRK05537 bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein; Validated
Back Show alignment and domain information
Probab=93.91 E-value=0.67 Score=38.73 Aligned_cols=95 Identities=13% Similarity=0.069 Sum_probs=59.7
Q ss_pred eEEEEecccCcCCHHHHHHHHHHHHcCCeEEEEEecCcccccCCCCCCcCHHHHHHHHhhcc---CCCEEEE-cCCC---
Q psy11152 7 LATSLQSNYDMVHFGHANNLRQAKELGNYLVVGVHTDEEISKHKGPPVFTQQERYKMVRGIK---WVDEVVE-GAPY--- 79 (112)
Q Consensus 7 ~~v~~~G~FD~~H~GH~~ll~~a~~~~~~lvv~v~~d~~~~~~k~~~i~s~~eR~~~l~~~~---~vd~vi~-~~~~--- 79 (112)
++|++.=+-+|+|+||..+++.|.+.++.. +.+++ ..-..| +--.+.+-|.+..+.+. --+.+++ .-|.
T Consensus 187 ~~v~afqtrnP~Hr~He~l~~~a~~~~d~~-lll~p--~~G~~k-~~d~~~~~r~~~~~~~~~~~p~~~~~l~~~p~~mr 262 (568)
T PRK05537 187 RRVVAFQTRNPLHRAHEELTKRAAREVGAN-LLIHP--VVGMTK-PGDIDHFTRVRCYEALLDKYPPATTLLSLLPLAMR 262 (568)
T ss_pred CcEEEEecCCCCcHHHHHHHHHHHHhcCCe-EEEec--CCCCCC-CCCCCHHHHHHHHHHHHHhCCCCcEEEEeccchhc
Confidence 567778899999999999999999988732 22232 111111 12467888888766551 1233333 1121
Q ss_pred -CCHHHH------HHhcCCCEEEEcCCCCCCcc
Q psy11152 80 -VTTLET------LDAYDCDFCVHGALEVLVSL 105 (112)
Q Consensus 80 -~~~~~f------i~~l~~~~iv~G~D~~f~~~ 105 (112)
-.|.|- -++++|..+++|.|+.-...
T Consensus 263 yaGpreai~hAi~r~N~Gcth~ivGrdhAg~~~ 295 (568)
T PRK05537 263 MAGPREALWHAIIRRNYGCTHFIVGRDHAGPGK 295 (568)
T ss_pred ccCcHHHHHHHHHHHhCCCCeEEECCCCCCCCC
Confidence 123332 16899999999999876643
>KOG3199|consensus
Back Show alignment and domain information
Probab=93.63 E-value=0.5 Score=35.06 Aligned_cols=70 Identities=14% Similarity=0.088 Sum_probs=46.4
Q ss_pred EEecccCcCCHHHHHHHHHHHHcC----Ce-EEEEEecCcccccCCCCCCcCHHHHHHHHhhccCCCEEEEcCCCC
Q psy11152 10 SLQSNYDMVHFGHANNLRQAKELG----NY-LVVGVHTDEEISKHKGPPVFTQQERYKMVRGIKWVDEVVEGAPYV 80 (112)
Q Consensus 10 ~~~G~FD~~H~GH~~ll~~a~~~~----~~-lvv~v~~d~~~~~~k~~~i~s~~eR~~~l~~~~~vd~vi~~~~~~ 80 (112)
++-|.|.|...+|+.+++-|+..- .. ++=|+.+ |.-..+|...+.+...|+++.+..-....-+.-|.|.
T Consensus 12 ~A~gSFNpiT~~HLrmfElAkd~l~~t~~~~Vv~GimS-PV~DaYkKKgLipa~hrv~~~ElAt~~Skwl~vD~we 86 (234)
T KOG3199|consen 12 LACGSFNPITNLHLRMFELAKDYLNETGRYRVVKGIMS-PVGDAYKKKGLIPAYHRVRMVELATETSKWLMVDGWE 86 (234)
T ss_pred EEecccCchhHHHHHHHHHHHHHHhccCCeEEEeeEec-ccchhhhccccchhhhHHHHHHhhhccccceecchhh
Confidence 778999999999999999998652 23 4445544 2221233336889999999998542344444445553
Homologous Structure Domains
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
ID Alignment Graph Length
Definition
Probability Query 112
d1coza_ 126
CTP:glycerol-3-phosphate cytidylyltransferase {Bac
99.96 d1mrza2 157
FMN adenylyltransferase domain of bifunctional FAD
99.89 d1f9aa_ 164
Nicotinamide mononucleotide (NMN) adenylyltransfer
99.5 d1lw7a1 163
Transcriptional regulator NadR, NMN-adenylyltransf
99.44 d1ej2a_ 167
Nicotinamide mononucleotide (NMN) adenylyltransfer
99.43 d1o6ba_ 163
Phosphopantetheine adenylyltransferase {Bacillus s
99.29 d1qjca_ 157
Phosphopantetheine adenylyltransferase {Escherichi
99.24 d1od6a_ 160
Phosphopantetheine adenylyltransferase {Thermus th
99.22 d1tfua_ 157
Phosphopantetheine adenylyltransferase {Mycobacter
99.21 d1vlha_ 157
Phosphopantetheine adenylyltransferase {Thermotoga
99.16 d1kama_ 189
Nicotinamide mononucleotide (NMN) adenylyltransfer
99.1 d1jhda2 223
ATP sulfurylase catalytic domain {Sulfur-oxidizing
98.84 d1kr2a_ 271
Nicotinamide mononucleotide (NMN) adenylyltransfer
98.82 d1k4ma_ 213
Nicotinamide mononucleotide (NMN) adenylyltransfer
98.79 d1nuua_ 233
Cytosolic NMN/NAMN adenylyltransferase {Human (Hom
98.65 d1v8fa_ 276
Pantothenate synthetase (Pantoate-beta-alanine lig
97.72 d1ihoa_ 282
Pantothenate synthetase (Pantoate-beta-alanine lig
97.48 d2a84a1 286
Pantothenate synthetase (Pantoate-beta-alanine lig
97.23 d1v47a2 214
ATP sulfurylase catalytic domain {Thermus thermoph
96.85 d1g8fa2 221
ATP sulfurylase catalytic domain {Baker's yeast (S
95.71 d1x6va2 235
ATP sulfurylase catalytic domain {Human (Homo sapi
94.45
>d1coza_ c.26.1.2 (A:) CTP:glycerol-3-phosphate cytidylyltransferase {Bacillus subtilis [TaxId: 1423]}
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class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Nucleotidylyl transferase
family: Cytidylyltransferase
domain: CTP:glycerol-3-phosphate cytidylyltransferase
species: Bacillus subtilis [TaxId: 1423]
Probab=99.96 E-value=9.3e-29 Score=164.69 Aligned_cols=99 Identities=25% Similarity=0.359 Sum_probs=90.4
Q ss_pred ceEEEEecccCcCCHHHHHHHHHHHHcCCeEEEEEecCcccccCCCCCCcCHHHHHHHHhhccCCCEEEEcCCCCCHHHH
Q psy11152 6 LLATSLQSNYDMVHFGHANNLRQAKELGNYLVVGVHTDEEISKHKGPPVFTQQERYKMVRGIKWVDEVVEGAPYVTTLET 85 (112)
Q Consensus 6 ~~~v~~~G~FD~~H~GH~~ll~~a~~~~~~lvv~v~~d~~~~~~k~~~i~s~~eR~~~l~~~~~vd~vi~~~~~~~~~~f 85 (112)
|++|++.|+||++|.||+++|++|++.|+.++|++++|+...+++++|++|.+||.++|+++++||.|++++++....++
T Consensus 1 Mk~V~~~G~FD~lH~GH~~~l~~Ak~~gd~liV~v~sD~~~~~~k~~pi~~~~eR~~~l~~~~~Vd~v~~~~~~~~~~~~ 80 (126)
T d1coza_ 1 MKKVITYGTFDLLHWGHIKLLERAKQLGDYLVVAISTDEFNLQKQKKAYHSYEHRKLILETIRYVDEVIPEKNWEQKKQD 80 (126)
T ss_dssp CCEEEEEECCCSCCHHHHHHHHHHHTTSSEEEEEEECHHHHHHHTCCCSSCHHHHHHHHTTBTTCCEEEEECCSTTHHHH
T ss_pred CcEEEEeeEeCCCCHHHHHHHHHHHhhCceeeeeeeccchhhhccCcccCCHHHHHHHhhhhcccceeeecccccccHhh
Confidence 56999999999999999999999999999999999999876655667999999999999999999999998777778889
Q ss_pred HHhcCCCEEEEcCCCCCCc
Q psy11152 86 LDAYDCDFCVHGALEVLVS 104 (112)
Q Consensus 86 i~~l~~~~iv~G~D~~f~~ 104 (112)
+++++||++++|+||....
T Consensus 81 i~~~~~d~~v~G~D~~~~~ 99 (126)
T d1coza_ 81 IIDHNIDVFVMGDDWEGKF 99 (126)
T ss_dssp HHHTTCSEEEEEGGGTTTT
T ss_pred hhccCCCEeeeccccccch
Confidence 9999999999999997543
>d1mrza2 c.26.1.3 (A:2-158) FMN adenylyltransferase domain of bifunctional FAD synthetase {Thermotoga maritima [TaxId: 2336]}
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class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Nucleotidylyl transferase
family: Adenylyltransferase
domain: FMN adenylyltransferase domain of bifunctional FAD synthetase
species: Thermotoga maritima [TaxId: 2336]
Probab=99.89 E-value=9.4e-24 Score=145.45 Aligned_cols=97 Identities=20% Similarity=0.145 Sum_probs=77.6
Q ss_pred EEEecccCcCCHHHHHHHHHHHHcC-----CeEEEEEecCcccc-cCCCCCCcCHHHHHHHHhhccCCCEEEEcCC--CC
Q psy11152 9 TSLQSNYDMVHFGHANNLRQAKELG-----NYLVVGVHTDEEIS-KHKGPPVFTQQERYKMVRGIKWVDEVVEGAP--YV 80 (112)
Q Consensus 9 v~~~G~FD~~H~GH~~ll~~a~~~~-----~~lvv~v~~d~~~~-~~k~~~i~s~~eR~~~l~~~~~vd~vi~~~~--~~ 80 (112)
|+++|+|||+|+|||++|++|++.+ ..+++++.++|..- +...+.+++.++|.++++++ +++.++.|+. .+
T Consensus 1 VvtiG~FDGvH~GHq~li~~~~~~a~~~~~~~~v~tf~~~p~~~~~~~~~~l~~~~~k~~~l~~~-g~~~~l~f~~~~~l 79 (157)
T d1mrza2 1 VVSIGVFDGVHIGHQKVLRTMKEIAFFRKDDSLIYTISYPPEYFLPDFPGLLMTVESRVEMLSRY-ARTVVLDFFRIKDL 79 (157)
T ss_dssp CEEEECCTTCCHHHHHHHHHHHHHHHHHTCCCEEEEESSCGGGGSTTCCCBSSCHHHHHHHHTTT-SCEEEECHHHHTTC
T ss_pred CEEEEcccchhHHHHHHHHHHHHHHHHcCCCceEeecCCCchheEeccccccccHHHhhhhhhcc-cceeeehhhhHhhh
Confidence 5899999999999999999998864 34677777666532 22223799999999999999 6887776532 27
Q ss_pred CHHHHHHhc--CCCEEEEcCCCCCCccc
Q psy11152 81 TTLETLDAY--DCDFCVHGALEVLVSLE 106 (112)
Q Consensus 81 ~~~~fi~~l--~~~~iv~G~D~~f~~~~ 106 (112)
++++|++++ +++.||+|+||+||..-
T Consensus 80 s~~~Fi~~~l~~~~~ivvG~Df~FG~~r 107 (157)
T d1mrza2 80 TPEGFVERYLSGVSAVVVGRDFRFGKNA 107 (157)
T ss_dssp CHHHHHHHHCTTCCEEEEETTCCBSGGG
T ss_pred hhhHHHHHHhhcCcEEEEecCccccccc
Confidence 899999764 89999999999999754
>d1f9aa_ c.26.1.3 (A:) Nicotinamide mononucleotide (NMN) adenylyltransferase {Archaeon Methanococcus jannaschii [TaxId: 2190]}
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class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Nucleotidylyl transferase
family: Adenylyltransferase
domain: Nicotinamide mononucleotide (NMN) adenylyltransferase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=99.50 E-value=7.1e-14 Score=93.37 Aligned_cols=59 Identities=20% Similarity=0.313 Sum_probs=48.2
Q ss_pred ceEEEEecccCcCCHHHHHHHHHHHHcCCeEEEEEecCcccccCCCCCCcCHHHHHHHHhhc
Q psy11152 6 LLATSLQSNYDMVHFGHANNLRQAKELGNYLVVGVHTDEEISKHKGPPVFTQQERYKMVRGI 67 (112)
Q Consensus 6 ~~~v~~~G~FD~~H~GH~~ll~~a~~~~~~lvv~v~~d~~~~~~k~~~i~s~~eR~~~l~~~ 67 (112)
|+ ++++|+|||+|.||+.++++|++.++.++|.+.+.... .+....+|.++|.++++..
T Consensus 1 mk-gl~~G~FdP~H~GH~~li~~a~~~~d~v~v~i~~~~~~--~~~~~~~s~~~R~~~i~~~ 59 (164)
T d1f9aa_ 1 LR-GFIIGRFQPFHKGHLEVIKKIAEEVDEIIIGIGSAQKS--HTLENPFTAGERILMITQS 59 (164)
T ss_dssp CE-EEEEECCTTCCHHHHHHHHHHTTTCSEEEEEECSTTCC--SSSSCCSCHHHHHHHHHHH
T ss_pred CE-EEEecccCCCCHHHHHHHHHHHHhCCCeEEEecCCccc--cCcCCCCCHHHHHHHHHHH
Confidence 45 89999999999999999999999999998888764422 1223568999999999765
>d1lw7a1 c.26.1.3 (A:57-219) Transcriptional regulator NadR, NMN-adenylyltransferase domain {Haemophilus influenzae [TaxId: 727]}
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class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Nucleotidylyl transferase
family: Adenylyltransferase
domain: Transcriptional regulator NadR, NMN-adenylyltransferase domain
species: Haemophilus influenzae [TaxId: 727]
Probab=99.44 E-value=1.1e-13 Score=91.26 Aligned_cols=62 Identities=24% Similarity=0.162 Sum_probs=51.8
Q ss_pred ceEEEEecccCcCCHHHHHHHHHHHHcCCeEEEEEecCcccc----c-CCCCCCcCHHHHHHHHhhc
Q psy11152 6 LLATSLQSNYDMVHFGHANNLRQAKELGNYLVVGVHTDEEIS----K-HKGPPVFTQQERYKMVRGI 67 (112)
Q Consensus 6 ~~~v~~~G~FD~~H~GH~~ll~~a~~~~~~lvv~v~~d~~~~----~-~k~~~i~s~~eR~~~l~~~ 67 (112)
+++++++|+|||+|.||+.++++|++.+++++|++++++... . ....++.+.++|.++++++
T Consensus 2 kkigl~~G~FdP~H~GH~~l~~~a~~~~d~v~v~i~~~~~~~~~~~~~~~~~~~~~~~~R~~~l~~~ 68 (163)
T d1lw7a1 2 KKVGVIFGKFYPVHTGHINMIYEAFSKVDELHVIVCSDTVRDLKLFYDSKMKRMPTVQDRLRWMQQI 68 (163)
T ss_dssp CCEEEEEECCSSCCHHHHHHHHHHHTTCSEEEEEEEECHHHHHHHHHHTTCSSCCCHHHHHHHHHHH
T ss_pred CeEEEEeeeCCCCCHHHHHHHHHHHHhCCccEEEEECCCCccccccccccccCCCCHHHHHHHHHHh
Confidence 578999999999999999999999999999999988876421 1 1223688999999999876
>d1ej2a_ c.26.1.3 (A:) Nicotinamide mononucleotide (NMN) adenylyltransferase {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
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class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Nucleotidylyl transferase
family: Adenylyltransferase
domain: Nicotinamide mononucleotide (NMN) adenylyltransferase
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]
Probab=99.43 E-value=1.5e-13 Score=92.30 Aligned_cols=56 Identities=20% Similarity=0.180 Sum_probs=46.7
Q ss_pred EEEecccCcCCHHHHHHHHHHHHcCCeEEEEEecCcccccCCCCCCcCHHHHHHHHhh
Q psy11152 9 TSLQSNYDMVHFGHANNLRQAKELGNYLVVGVHTDEEISKHKGPPVFTQQERYKMVRG 66 (112)
Q Consensus 9 v~~~G~FD~~H~GH~~ll~~a~~~~~~lvv~v~~d~~~~~~k~~~i~s~~eR~~~l~~ 66 (112)
++++|+|||+|.||+.++++|.+.++.++|.+.+..... +....+|.++|.++++.
T Consensus 3 gi~~G~FdP~H~GH~~ii~~a~~~~d~v~v~i~~~~~~~--~~~~~~~~~~R~~mi~~ 58 (167)
T d1ej2a_ 3 GLLVGRMQPFHRGHLQVIKSILEEVDELIICIGSAQLSH--SIRDPFTAGERVMMLTK 58 (167)
T ss_dssp EEEEECCTTCCHHHHHHHHHHTTTCSEEEEEECSTTCCS--SSSSCSCHHHHHHHHHH
T ss_pred EEEeeccCCCCHHHHHHHHHHHHHCCceEEEEecCCCCC--CccccccHHHHHHHHHH
Confidence 899999999999999999999999999989887654221 22357799999999875
>d1o6ba_ c.26.1.3 (A:) Phosphopantetheine adenylyltransferase {Bacillus subtilis [TaxId: 1423]}
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class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Nucleotidylyl transferase
family: Adenylyltransferase
domain: Phosphopantetheine adenylyltransferase
species: Bacillus subtilis [TaxId: 1423]
Probab=99.29 E-value=4.7e-12 Score=84.07 Aligned_cols=56 Identities=20% Similarity=0.422 Sum_probs=47.0
Q ss_pred eEEEEecccCcCCHHHHHHHHHHHHcCCeEEEEEecCcccccCCCCCCcCHHHHHHHHhhc
Q psy11152 7 LATSLQSNYDMVHFGHANNLRQAKELGNYLVVGVHTDEEISKHKGPPVFTQQERYKMVRGI 67 (112)
Q Consensus 7 ~~v~~~G~FD~~H~GH~~ll~~a~~~~~~lvv~v~~d~~~~~~k~~~i~s~~eR~~~l~~~ 67 (112)
.+++++|+|||+|.||+.++++|.+.+|+++|.+...+. ..+..+.++|.+++...
T Consensus 2 ~IaifgGsFdPiH~GHl~i~~~a~~~~D~v~v~~~~~~~-----~~~~~~~~~r~~~~~~~ 57 (163)
T d1o6ba_ 2 SIAVCPGSFDPVTYGHLDIIKRGAHIFEQVYVCVLNNSS-----KKPLFSVEERCELLREV 57 (163)
T ss_dssp CEEEEEECCTTCCHHHHHHHHHHHHHSSEEEEEECCCCS-----SCCSSCHHHHHHHHHHH
T ss_pred eEEEeccccCCCCHHHHHHHHHHHHhCCEEEEccccccc-----ccccCCHHHHHHHHhhh
Confidence 478999999999999999999999999998887765541 23678999999988654
>d1qjca_ c.26.1.3 (A:) Phosphopantetheine adenylyltransferase {Escherichia coli [TaxId: 562]}
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class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Nucleotidylyl transferase
family: Adenylyltransferase
domain: Phosphopantetheine adenylyltransferase
species: Escherichia coli [TaxId: 562]
Probab=99.24 E-value=1.3e-11 Score=80.80 Aligned_cols=63 Identities=17% Similarity=0.348 Sum_probs=45.7
Q ss_pred eEEEEecccCcCCHHHHHHHHHHHHcCCeEEEEEecCcccccCCCCCCcCHHHHHHHHhh-ccCCCEEE
Q psy11152 7 LATSLQSNYDMVHFGHANNLRQAKELGNYLVVGVHTDEEISKHKGPPVFTQQERYKMVRG-IKWVDEVV 74 (112)
Q Consensus 7 ~~v~~~G~FD~~H~GH~~ll~~a~~~~~~lvv~v~~d~~~~~~k~~~i~s~~eR~~~l~~-~~~vd~vi 74 (112)
++++++|+|||+|.||+.++++|.+.+|+++|.++..+. .+ +..+..+|..++.. ......+.
T Consensus 1 k~AifgGsFdP~H~GHl~li~~a~~~~D~v~v~~~~~~~---~k--~~~~~~~~~~~~~~~~~~~~~~~ 64 (157)
T d1qjca_ 1 KRAIYPGTFDPITNGHIDIVTRATQMFDHVILAIAASPS---KK--PMFTLEERVALAQQATAHLGNVE 64 (157)
T ss_dssp CEEEEEECCTTCCHHHHHHHHHHHTTSSEEEEEEESCCS---SC--CSSCHHHHHHHHHHHTTTCTTEE
T ss_pred CEEEEeeccCCCCHHHHHHHHHHHHhCCEeeecccCccc---cc--cccCHHHHHHHHHHHHHHhhccc
Confidence 478999999999999999999999999999998887652 12 23455566555543 33344433
>d1od6a_ c.26.1.3 (A:) Phosphopantetheine adenylyltransferase {Thermus thermophilus [TaxId: 274]}
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class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Nucleotidylyl transferase
family: Adenylyltransferase
domain: Phosphopantetheine adenylyltransferase
species: Thermus thermophilus [TaxId: 274]
Probab=99.22 E-value=1.9e-11 Score=80.40 Aligned_cols=54 Identities=22% Similarity=0.412 Sum_probs=39.9
Q ss_pred EEEecccCcCCHHHHHHHHHHHHcCCeEEEEEecCcccccCCCCCCcCHHHHHHHHh
Q psy11152 9 TSLQSNYDMVHFGHANNLRQAKELGNYLVVGVHTDEEISKHKGPPVFTQQERYKMVR 65 (112)
Q Consensus 9 v~~~G~FD~~H~GH~~ll~~a~~~~~~lvv~v~~d~~~~~~k~~~i~s~~eR~~~l~ 65 (112)
++++|+|||+|.||++++++|.+.+|++++++..++.. +.....+..+|...+.
T Consensus 3 ~ifgGsFdP~H~GHl~ii~~a~~~~D~v~i~~~~~~~k---k~~~~~~~~~~~~~~~ 56 (160)
T d1od6a_ 3 VVYPGSFDPLTNGHLDVIQRASRLFEKVTVAVLENPSK---RGQYLFSAEERLAIIR 56 (160)
T ss_dssp EEEEECCTTCCHHHHHHHHHHHHHSSEEEEEEECC--------CCSSCHHHHHHHHH
T ss_pred EEeeeccCCcCHHHHHHHHHHHHhCCEEEEeccCCCCc---cccccCCHHHHHHHHH
Confidence 58999999999999999999999999999988876632 2223455556655443
>d1tfua_ c.26.1.3 (A:) Phosphopantetheine adenylyltransferase {Mycobacterium tuberculosis [TaxId: 1773]}
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class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Nucleotidylyl transferase
family: Adenylyltransferase
domain: Phosphopantetheine adenylyltransferase
species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.21 E-value=2.5e-11 Score=79.76 Aligned_cols=40 Identities=18% Similarity=0.305 Sum_probs=36.0
Q ss_pred ceEEEEecccCcCCHHHHHHHHHHHHcCCeEEEEEecCcc
Q psy11152 6 LLATSLQSNYDMVHFGHANNLRQAKELGNYLVVGVHTDEE 45 (112)
Q Consensus 6 ~~~v~~~G~FD~~H~GH~~ll~~a~~~~~~lvv~v~~d~~ 45 (112)
|++++++|+|||+|+||++++++|.+.++.++|.+.+.+.
T Consensus 1 m~~Av~~GsFdPiH~GHl~i~~~a~~~~d~~~v~~~~~~~ 40 (157)
T d1tfua_ 1 MTGAVCPGSFDPVTLGHVDIFERAAAQFDEVVVAILVNPA 40 (157)
T ss_dssp CCEEEEEECCTTCCHHHHHHHHHHHHHSSEEEEEEECCSS
T ss_pred CCEeEeCcCCCCCCHHHHHHHHHHHHhcChHHhhccccCc
Confidence 5699999999999999999999999999998888877653
>d1vlha_ c.26.1.3 (A:) Phosphopantetheine adenylyltransferase {Thermotoga maritima [TaxId: 2336]}
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class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Nucleotidylyl transferase
family: Adenylyltransferase
domain: Phosphopantetheine adenylyltransferase
species: Thermotoga maritima [TaxId: 2336]
Probab=99.16 E-value=5e-11 Score=78.21 Aligned_cols=36 Identities=22% Similarity=0.378 Sum_probs=33.4
Q ss_pred EEEecccCcCCHHHHHHHHHHHHcCCeEEEEEecCc
Q psy11152 9 TSLQSNYDMVHFGHANNLRQAKELGNYLVVGVHTDE 44 (112)
Q Consensus 9 v~~~G~FD~~H~GH~~ll~~a~~~~~~lvv~v~~d~ 44 (112)
++++|+|||+|+||++++++|.+.+|++++.+...+
T Consensus 3 aifgGsFdPiH~GHl~i~~~a~~~~D~v~v~~~~~~ 38 (157)
T d1vlha_ 3 AVYPGSFDPITLGHVDIIKRALSIFDELVVLVTENP 38 (157)
T ss_dssp EEEEECCTTCCHHHHHHHHHHHTTCSEEEEEEECCT
T ss_pred EEEeecCCCCcHHHHHHHHHHHHhcCcccccccccc
Confidence 899999999999999999999999999998887655
>d1kama_ c.26.1.3 (A:) Nicotinamide mononucleotide (NMN) adenylyltransferase {Bacillus subtilis [TaxId: 1423]}
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class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Nucleotidylyl transferase
family: Adenylyltransferase
domain: Nicotinamide mononucleotide (NMN) adenylyltransferase
species: Bacillus subtilis [TaxId: 1423]
Probab=99.10 E-value=8.5e-11 Score=78.11 Aligned_cols=63 Identities=10% Similarity=0.008 Sum_probs=39.0
Q ss_pred CceEEEEecccCcCCHHHHHHHHHHHHcCCeEEEEEecCcccccCCCCCCcCHHHHHHHHhhc
Q psy11152 5 NLLATSLQSNYDMVHFGHANNLRQAKELGNYLVVGVHTDEEISKHKGPPVFTQQERYKMVRGI 67 (112)
Q Consensus 5 ~~~~v~~~G~FD~~H~GH~~ll~~a~~~~~~lvv~v~~d~~~~~~k~~~i~s~~eR~~~l~~~ 67 (112)
++++++++|+|||+|.||++++++|.+.++...|.+.+.+.....+........+|..+....
T Consensus 1 ~kkIalfgGSFdP~H~GH~~ii~~a~~~~~~~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 63 (189)
T d1kama_ 1 SKKIGIFGGTFDPPHNGHLLMANEVLYQAGLDEIWFMPNQIPPHKQNEDYTDSFHRVEMLKLA 63 (189)
T ss_dssp CCEEEEEEECCSSCCHHHHHHHHHHHHHTTCSEEEEEECCCC---------CHHHHHHHHHHH
T ss_pred CCEEEEeccCcCCCCHHHHHHHHHHHHHcCCCEEEEEeccCCcccccchhhHHHHHHHHHHhh
Confidence 357889999999999999999999999986544433332211111222455666666655543
>d1jhda2 c.26.1.5 (A:174-396) ATP sulfurylase catalytic domain {Sulfur-oxidizing endosymbiont of Riftia pachyptila [TaxId: 35843]}
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class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Nucleotidylyl transferase
family: ATP sulfurylase catalytic domain
domain: ATP sulfurylase catalytic domain
species: Sulfur-oxidizing endosymbiont of Riftia pachyptila [TaxId: 35843]
Probab=98.84 E-value=6.1e-09 Score=73.02 Aligned_cols=93 Identities=13% Similarity=0.046 Sum_probs=61.4
Q ss_pred CceEEEEecccCcCCHHHHHHHHHHHHc--CCeEEEEEecCcccccCCCC-CCcCHHHHHHHHhh-ccCCCEEEE--c--
Q psy11152 5 NLLATSLQSNYDMVHFGHANNLRQAKEL--GNYLVVGVHTDEEISKHKGP-PVFTQQERYKMVRG-IKWVDEVVE--G-- 76 (112)
Q Consensus 5 ~~~~v~~~G~FD~~H~GH~~ll~~a~~~--~~~lvv~v~~d~~~~~~k~~-~i~s~~eR~~~l~~-~~~vd~vi~--~-- 76 (112)
+.++|++.|||||+|.||+.+.+.|.+. .+++++.++..+. .|.. +..+...|++++.. ...-+.+.+ +
T Consensus 18 ~~~~v~~f~TfnP~H~GHl~ia~~a~~~~~ld~v~~iP~~~~p---~K~~~~~~~~~~r~~m~~~a~~~~~~~~is~~E~ 94 (223)
T d1jhda2 18 GWSKVVAFQTRNPMHRAHEELCRMAMESLDADGVVVHMLLGKL---KKGDIPAPVRDAAIRTMAEVYFPPNTVMVTGYGF 94 (223)
T ss_dssp TCSSEEEEEESSCCCHHHHHHHHHHHHHHTCSEEEEEEEECCC---CTTCCCHHHHHHHHHHHHHHHSCTTCEEEEEEEC
T ss_pred CCCEEEEeeCCCCCCHHHHHHHHHHHHHhCcCceEEecccCCC---CcCCCccccHHHHHHHHHHhhcCCCceeeccccc
Confidence 3467888899999999999999999987 4677776665542 2333 56788888888763 444454443 1
Q ss_pred CCC-CC-HHH---HH--HhcCCCEEEEcCCC
Q psy11152 77 APY-VT-TLE---TL--DAYDCDFCVHGALE 100 (112)
Q Consensus 77 ~~~-~~-~~~---fi--~~l~~~~iv~G~D~ 100 (112)
... .+ +.+ .+ +..+..++++|.|.
T Consensus 95 ~~~~~syt~~tl~~l~~~~~~~~~~iiG~D~ 125 (223)
T d1jhda2 95 DMLYAGPREAVLHAYFRQNMGATHFIIGRDH 125 (223)
T ss_dssp CCCCCTHHHHHHHHHHHHHTTCSEEEECTTT
T ss_pred cccCCCcHHHHHHHHHHhCCcceEEEEeecc
Confidence 111 12 222 22 23567899999885
>d1kr2a_ c.26.1.3 (A:) Nicotinamide mononucleotide (NMN) adenylyltransferase {Human (Homo sapiens) [TaxId: 9606]}
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class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Nucleotidylyl transferase
family: Adenylyltransferase
domain: Nicotinamide mononucleotide (NMN) adenylyltransferase
species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.82 E-value=9.8e-09 Score=74.20 Aligned_cols=64 Identities=14% Similarity=-0.007 Sum_probs=44.3
Q ss_pred EEEEecccCcCCHHHHHHHHHHHHcC----C----eEEEEEecCcccccCCCCCCcCHHHHHHHHhh-ccCCCEEEE
Q psy11152 8 ATSLQSNYDMVHFGHANNLRQAKELG----N----YLVVGVHTDEEISKHKGPPVFTQQERYKMVRG-IKWVDEVVE 75 (112)
Q Consensus 8 ~v~~~G~FD~~H~GH~~ll~~a~~~~----~----~lvv~v~~d~~~~~~k~~~i~s~~eR~~~l~~-~~~vd~vi~ 75 (112)
+.++.|+|||+|.||+.+++.|.+.. . .+++..+.++ .+.+.+.+.++|++|++- +++.+.+.+
T Consensus 6 v~l~~GSFdP~H~GHl~ia~~a~~~l~~~~~~~~~~~~~~P~~~~----~~k~~~~s~~~Rl~Ml~la~~~~~~~~v 78 (271)
T d1kr2a_ 6 VLLACGSFNPITNMHLRLFELAKDYMNGTGRYTVVKGIISPVGDA----YKKKGLIPAYHRVIMAELATKNSKWVEV 78 (271)
T ss_dssp EEEEEECCTTCCHHHHHHHHHHHHHHHHTSSEEEEEEEEEECCGG----GCCTTCCCHHHHHHHHHHHTTTCSSEEE
T ss_pred EEEEccccCcchHHHHHHHHHHHHHHhhccccceeEEEEecCCCC----CcCCCCCCHHHHHHHHHHHHhcCCCEEE
Confidence 44789999999999999999887642 1 2233333222 222457899999999974 556666665
>d1k4ma_ c.26.1.3 (A:) Nicotinamide mononucleotide (NMN) adenylyltransferase {Escherichia coli [TaxId: 562]}
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class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Nucleotidylyl transferase
family: Adenylyltransferase
domain: Nicotinamide mononucleotide (NMN) adenylyltransferase
species: Escherichia coli [TaxId: 562]
Probab=98.79 E-value=1e-08 Score=68.83 Aligned_cols=58 Identities=19% Similarity=0.277 Sum_probs=41.6
Q ss_pred ceEEEEecccCcCCHHHHHHHHHHHHcC--CeEEEEEecCcccccCCCCCCcCHHHHHHHHhh
Q psy11152 6 LLATSLQSNYDMVHFGHANNLRQAKELG--NYLVVGVHTDEEISKHKGPPVFTQQERYKMVRG 66 (112)
Q Consensus 6 ~~~v~~~G~FD~~H~GH~~ll~~a~~~~--~~lvv~v~~d~~~~~~k~~~i~s~~eR~~~l~~ 66 (112)
..+++++|+|||+|.||+.+++.|.+.. +++++.++.++. .+........+|..++..
T Consensus 3 ~~~AlfgGSFnP~h~GHl~~~~~a~~~~~~d~v~~~p~~~~~---~k~~~~~~~~~~~~~~~~ 62 (213)
T d1k4ma_ 3 SLQALFGGTFDPVHYGHLKPVETLANLIGLTRVTIIPNNVPP---HRPQPEANSVQRKHMLEL 62 (213)
T ss_dssp CCEEEEEECCTTCCHHHHHHHHHHHHHHTCSCEEEEECSSCT---TSCCCSSCHHHHHHHHHH
T ss_pred ccEEEEecCcCcCcHHHHHHHHHHHHHcCCCEEEEEEeCCCc---hhcccccchHHHHHHHHH
Confidence 3578999999999999999999999874 678877776542 232334455556655543
>d1nuua_ c.26.1.3 (A:) Cytosolic NMN/NAMN adenylyltransferase {Human (Homo sapiens), FKSG76 [TaxId: 9606]}
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class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Nucleotidylyl transferase
family: Adenylyltransferase
domain: Cytosolic NMN/NAMN adenylyltransferase
species: Human (Homo sapiens), FKSG76 [TaxId: 9606]
Probab=98.65 E-value=1.6e-08 Score=70.92 Aligned_cols=67 Identities=10% Similarity=0.049 Sum_probs=43.0
Q ss_pred EEEEecccCcCCHHHHHHHHHHHHcCC--e---EEEEEecCcccccCCCCCCcCHHHHHHHHhh-ccCCCEEEE
Q psy11152 8 ATSLQSNYDMVHFGHANNLRQAKELGN--Y---LVVGVHTDEEISKHKGPPVFTQQERYKMVRG-IKWVDEVVE 75 (112)
Q Consensus 8 ~v~~~G~FD~~H~GH~~ll~~a~~~~~--~---lvv~v~~d~~~~~~k~~~i~s~~eR~~~l~~-~~~vd~vi~ 75 (112)
+.++.|+|||+|.||+.+++.|.+..+ . ++.++.+ +.-+..+..+..+.++|++|++. +...+.+.+
T Consensus 6 vl~~~GSFdP~H~GHl~i~~~a~~~~~~~~~~~~~~~~~~-p~~~~~~~~~~~~~~~R~~M~~la~~~~~~~~v 78 (233)
T d1nuua_ 6 VLLACGSFNPITNMHLRMFEVARDHLHQTGMYQVIQGIIS-PVNDTYGKKDLAASHHRVAMARLALQTSDWIRV 78 (233)
T ss_dssp EEEEEECCTTCCHHHHHHHHHHHHHHHHHSSEEEEEEEEE-ECCTTCSSSCCCCHHHHHHHHHHHGGGCSSEEE
T ss_pred EEEEeeeeCccHHHHHHHHHHHHHHhCcccceeeeeEEEc-cCCCCcccCccCCHHHHHHHHHHHHhccCCEEE
Confidence 356889999999999999999987642 2 2112211 11111223368999999999964 344555554
>d1v8fa_ c.26.1.4 (A:) Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC) {Thermus thermophilus [TaxId: 274]}
Back Show information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Nucleotidylyl transferase
family: Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC)
domain: Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC)
species: Thermus thermophilus [TaxId: 274]
Probab=97.72 E-value=0.00011 Score=53.12 Aligned_cols=66 Identities=14% Similarity=0.158 Sum_probs=51.1
Q ss_pred EEEecccCcCCHHHHHHHHHHHHcCCeEEEEEecCccc-ccCCC--CCCcCHHHHHHHHhhccCCCEEEE
Q psy11152 9 TSLQSNYDMVHFGHANNLRQAKELGNYLVVGVHTDEEI-SKHKG--PPVFTQQERYKMVRGIKWVDEVVE 75 (112)
Q Consensus 9 v~~~G~FD~~H~GH~~ll~~a~~~~~~lvv~v~~d~~~-~~~k~--~~i~s~~eR~~~l~~~~~vd~vi~ 75 (112)
+-...|==.+|.||+.|+++|++.++.++|++.-+|.- ++... ...-+.++=++++++. +||.|+.
T Consensus 19 i~~VPTMGaLH~GHlsLi~~a~~~~~~vvvSIFVNP~QF~~~eD~~~YPr~~~~D~~~l~~~-~vd~vf~ 87 (276)
T d1v8fa_ 19 VGFVPTMGYLHRGHLALVERARRENPFVVVSVFVNPLQFGPGEDYHRYPRDLERDRALLQEA-GVDLLFA 87 (276)
T ss_dssp EEEEEECSSCCHHHHHHHHHHHHHCSEEEEEECCCGGGCCTTSSTTTSCCCHHHHHHHHHHT-TCSEEEC
T ss_pred EEEEcCCccHhHHHHHHHHHHHHhCCCEEEEEEecCccCCCcchhhccccchhhhHHHHHhC-CCCEEEe
Confidence 33444666799999999999999999999999888852 22221 2466788889999999 7998875
>d1ihoa_ c.26.1.4 (A:) Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC) {Escherichia coli [TaxId: 562]}
Back Show information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Nucleotidylyl transferase
family: Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC)
domain: Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC)
species: Escherichia coli [TaxId: 562]
Probab=97.48 E-value=0.00013 Score=52.94 Aligned_cols=67 Identities=21% Similarity=0.187 Sum_probs=50.5
Q ss_pred EEEEecccCcCCHHHHHHHHHHHHcCCeEEEEEecCccc-ccCCC--CCCcCHHHHHHHHhhccCCCEEEE
Q psy11152 8 ATSLQSNYDMVHFGHANNLRQAKELGNYLVVGVHTDEEI-SKHKG--PPVFTQQERYKMVRGIKWVDEVVE 75 (112)
Q Consensus 8 ~v~~~G~FD~~H~GH~~ll~~a~~~~~~lvv~v~~d~~~-~~~k~--~~i~s~~eR~~~l~~~~~vd~vi~ 75 (112)
.+-...|==.+|-||+.|+++|++.++.++|++..+|.- ++... ...-++++=++++++. +||.|+.
T Consensus 23 ~ig~VPTMGaLH~GHlsLi~~A~~~~~~vvvSIFVNP~QF~~~eD~~~YPr~l~~D~~~l~~~-~vd~vf~ 92 (282)
T d1ihoa_ 23 RVALVPTMGNLHDGHMKLVDEAKARADVVVVSIFVNPMQFDRPEDLARYPRTLQEDCEKLNKR-KVDLVFA 92 (282)
T ss_dssp CEEEEEECSCCCHHHHHHHHHHHHHCSEEEEEECCCGGGCSSHHHHHHSCCCHHHHHHHHHHT-TCSEEEC
T ss_pred cEEEEcCCcchhHHHHHHHHHHHHhCCcEEEEEEecCccCcccchhhccCccHHHHHHHHHhc-CCcEEEe
Confidence 334445666799999999999999999999999888742 11111 1356788888999999 7998875
>d2a84a1 c.26.1.4 (A:3-288) Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC) {Mycobacterium tuberculosis [TaxId: 1773]}
Back Show information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Nucleotidylyl transferase
family: Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC)
domain: Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC)
species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.23 E-value=0.00024 Score=51.48 Aligned_cols=66 Identities=20% Similarity=0.190 Sum_probs=45.4
Q ss_pred EEEecccCcCCHHHHHHHHHHHH-cCCeEEEEEecCccc-ccCCC--CCCcCHHHHHHHHhhccCCCEEEE
Q psy11152 9 TSLQSNYDMVHFGHANNLRQAKE-LGNYLVVGVHTDEEI-SKHKG--PPVFTQQERYKMVRGIKWVDEVVE 75 (112)
Q Consensus 9 v~~~G~FD~~H~GH~~ll~~a~~-~~~~lvv~v~~d~~~-~~~k~--~~i~s~~eR~~~l~~~~~vd~vi~ 75 (112)
+...-|=-.+|.||+.|+++|++ .++.++|++.-+|.- ++... ...-++++=++++++. +||.++.
T Consensus 32 i~~VPTMGaLH~GHlsLi~~a~~~~~~~vvvSIFVNP~QF~~~eD~~~YPr~~~~D~~~l~~~-~vd~vf~ 101 (286)
T d2a84a1 32 VMLVPTMGALHEGHLALVRAAKRVPGSVVVVSIFVNPMQFGAGGDLDAYPRTPDDDLAQLRAE-GVEIAFT 101 (286)
T ss_dssp EEEEEECSSCCHHHHHHHHHHHTSTTCEEEEEECCCCCCTTC----------CCSHHHHHHHT-TCCEEEC
T ss_pred EEEEeCCcchhHHHHHHHHHHhhcCCCEEEEEEeecccccCccccCccCCcchhhhhHHHhcc-CCceeec
Confidence 44445778899999999999997 688889999887742 22111 1234455557888898 7998875
>d1v47a2 c.26.1.5 (A:136-349) ATP sulfurylase catalytic domain {Thermus thermophilus [TaxId: 274]}
Back Show information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Nucleotidylyl transferase
family: ATP sulfurylase catalytic domain
domain: ATP sulfurylase catalytic domain
species: Thermus thermophilus [TaxId: 274]
Probab=96.85 E-value=0.012 Score=40.47 Aligned_cols=91 Identities=14% Similarity=0.093 Sum_probs=58.4
Q ss_pred eEEEEecccCcCCHHHHHHHHHHHHcCCeEEEEEecCcccccCCCCCCcCHHHHHHHHhhc-c--C-CCEEEE--cCCC-
Q psy11152 7 LATSLQSNYDMVHFGHANNLRQAKELGNYLVVGVHTDEEISKHKGPPVFTQQERYKMVRGI-K--W-VDEVVE--GAPY- 79 (112)
Q Consensus 7 ~~v~~~G~FD~~H~GH~~ll~~a~~~~~~lvv~v~~d~~~~~~k~~~i~s~~eR~~~l~~~-~--~-vd~vi~--~~~~- 79 (112)
++|++.=|=+++|.||..+++.|.+.++.|++-..--+ +.+-=++.+-|.+..+.+ + . -+.+++ +...
T Consensus 21 ~~v~aFqTrnp~Hr~He~i~~~a~~~~~~lli~p~vG~-----~k~gd~~~~~r~~~y~~~~~~~~~~~~v~l~~~~~~m 95 (214)
T d1v47a2 21 RKVVAFQTRNAPHRAHEYLIRLGLELADGVLVHPILGA-----KKPDDFPTEVIVEAYQALIRDFLPQERVAFFGLATPM 95 (214)
T ss_dssp CSEEEEEESSCCCHHHHHHHHHHHHHSSEEEEEEBCSC-----CCTTSCCHHHHHHHHHHHHHHHSCGGGEEECCBCSCC
T ss_pred CEEEEEecCCCCCHHHHHHHHHHHHhcCCEEEeeeecc-----CCccccCHHHHHHHHHHHHhhcCCCCeEEEEecCccc
Confidence 34555445599999999999999999997665443222 111246778887766543 1 1 234554 2111
Q ss_pred --CCHHHHH------HhcCCCEEEEcCCCCC
Q psy11152 80 --VTTLETL------DAYDCDFCVHGALEVL 102 (112)
Q Consensus 80 --~~~~~fi------~~l~~~~iv~G~D~~f 102 (112)
-.|.|-+ ++++|+.+++|.|+.-
T Consensus 96 ~yaGPrEA~lhAiirkN~GcthfiVGRDHAG 126 (214)
T d1v47a2 96 RYAGPKEAVFHALVRKNFGATHFLVGRDHAG 126 (214)
T ss_dssp CCCTHHHHHHHHHHHHHTTCSEEEECTTTTC
T ss_pred ccccchHHHHHHHHHHhcCCCeEEEcCcCCc
Confidence 2455532 6799999999999874
>d1g8fa2 c.26.1.5 (A:169-389) ATP sulfurylase catalytic domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Back Show information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Nucleotidylyl transferase
family: ATP sulfurylase catalytic domain
domain: ATP sulfurylase catalytic domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=95.71 E-value=0.063 Score=36.81 Aligned_cols=91 Identities=11% Similarity=0.010 Sum_probs=57.2
Q ss_pred eEEEEecccCcCCHHHHHHHHHHHHcC-CeEEEEEecCcccccCCCCCCcCHHHHHHHHhhc-c--CCCEEEE--cCCC-
Q psy11152 7 LATSLQSNYDMVHFGHANNLRQAKELG-NYLVVGVHTDEEISKHKGPPVFTQQERYKMVRGI-K--WVDEVVE--GAPY- 79 (112)
Q Consensus 7 ~~v~~~G~FD~~H~GH~~ll~~a~~~~-~~lvv~v~~d~~~~~~k~~~i~s~~eR~~~l~~~-~--~vd~vi~--~~~~- 79 (112)
++|++.=|=+++|+||.++++.|.+.+ +.++|-..--+ ..++ =.+.+-|.+..+.+ + .-+.+++ +...
T Consensus 21 ~~v~afqTrnp~Hr~He~i~~~a~~~~~~~lli~p~vg~---~k~g--d~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~m 95 (221)
T d1g8fa2 21 DRVVAFQTRNPMHRAHRELTVRAAREANAKVLIHPVVGL---TKPG--DIDHHTRVRVYQEIIKRYPNGIAFLSLLPLAM 95 (221)
T ss_dssp CCEEEEEESSCCCHHHHHHHHHHHHHHTCEEEEEEBCSB---CSTT--CCCHHHHHHHHHHHGGGSCTTSEEECCBCCBC
T ss_pred CeEEEEecCCCCCHHHHHHHHHHHHhcCCCEEEeecccC---Cccc--cCCHHHHHHHHHHHHHhcCCCeEEEEeccccc
Confidence 467777788999999999999988764 44544322211 1122 35678888866654 1 1233444 2211
Q ss_pred --CCHHHHH------HhcCCCEEEEcCCCCC
Q psy11152 80 --VTTLETL------DAYDCDFCVHGALEVL 102 (112)
Q Consensus 80 --~~~~~fi------~~l~~~~iv~G~D~~f 102 (112)
-.|.|-+ ++++++.+++|.|+.-
T Consensus 96 ~yaGPrEA~lhAiirkN~GcthfiVGRDHAG 126 (221)
T d1g8fa2 96 RMSGDREAVWHAIIRKNYGASHFIVGRDHAG 126 (221)
T ss_dssp CCCHHHHHHHHHHHHHHTTCSEEECCTTTTC
T ss_pred cccchHHHHHHHHHHHhcCCCeeEecccccC
Confidence 1244432 6799999999999985
>d1x6va2 c.26.1.5 (A:390-624) ATP sulfurylase catalytic domain {Human (Homo sapiens) [TaxId: 9606]}
Back Show information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Nucleotidylyl transferase
family: ATP sulfurylase catalytic domain
domain: ATP sulfurylase catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.45 E-value=0.25 Score=34.00 Aligned_cols=93 Identities=17% Similarity=-0.016 Sum_probs=55.3
Q ss_pred eEEEEecccCcCCHHHHHHHHHHHHcC-----CeEEEEEecCcccccCCCCCCcCHHHHHHHHhhc-----cCCCEEEE-
Q psy11152 7 LATSLQSNYDMVHFGHANNLRQAKELG-----NYLVVGVHTDEEISKHKGPPVFTQQERYKMVRGI-----KWVDEVVE- 75 (112)
Q Consensus 7 ~~v~~~G~FD~~H~GH~~ll~~a~~~~-----~~lvv~v~~d~~~~~~k~~~i~s~~eR~~~l~~~-----~~vd~vi~- 75 (112)
++|++.=|=+++|.||..+++.|.+.+ ..-.+.+++ .+-..| +--++.+-|.+..+.+ -.-+.+++
T Consensus 24 ~~VvaFqTRNp~HraHe~i~~~a~~~~~~~~~~~~~lli~P--vvG~~k-~gD~~~~~~~~~y~~l~~~~~~~~~~~~l~ 100 (235)
T d1x6va2 24 DAVSAFQLRNPVHNGHALLMQDTHKQLLERGYRRPVLLLHP--LGGWTK-DDDVPLMWRMKQHAAVLEEGVLNPETTVVA 100 (235)
T ss_dssp SEEEEEEESSCCCHHHHHHHHHHHHHHHHTTCSSEEEEEEE--BCSCCC-TTSCCHHHHHHHHHHHHHTTSSCGGGEEEC
T ss_pred CeEEEeecCCCCcHHHHHHHHHHHHHHHhccccCCeEEEee--ccccCC-CCccChHHHHHHHHHHHHhccCCCCcEEEE
Confidence 456666678999999999999988753 122333333 121111 2246778887644432 12344554
Q ss_pred -cCCC---CCHHHH-----H-HhcCCCEEEEcCCCCC
Q psy11152 76 -GAPY---VTTLET-----L-DAYDCDFCVHGALEVL 102 (112)
Q Consensus 76 -~~~~---~~~~~f-----i-~~l~~~~iv~G~D~~f 102 (112)
+... -.|.|- + ++++|+.+++|.|+.-
T Consensus 101 ~l~~~mryAGPrEAllhAiiRkN~GcThfiVGRDHAG 137 (235)
T d1x6va2 101 IFPSPMMYAGPTEVQWHCRARMVAGANFYIVGRDPAG 137 (235)
T ss_dssp CBCCCCCCCHHHHHHHHHHHHHHTTCSEEEECSSTTC
T ss_pred eccccccccccHHHHHHHHHHHhcCCCeEEEcCcccC
Confidence 2111 234442 2 6799999999999985
