Psyllid ID: psy11245

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80-------
Protein Sequence
NRLESNSEHWNALLLNLRELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLEDKRAIIENSILSGRQYLNEASLTDLTDT
Secondary Structure (PSIPRED)
cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccc
Secondary Structure Prediction (SSPRO)
cccHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHcccccccccc
Coil and Loop (DISEMBL)
NRLESNSEHWNALLLNLRELSDwvfrkdaelsrlgpiggdinvlqKQEDDHRAFRRQLEDKRAIIENSILSGRqylneasltdltdt
Flexible Loop (DISEMBL)
NRLESNSEHWNALLLNLRELSDWVFRKDAELsrlgpiggdinvlqkqEDDHRAFRRQLEDKRAIIEnsilsgrqylneasltdltdt
Low Complexity Region (SEG)
NRLESNSEHWNALLLNLRELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLEDKRAIIENSILSGRQYLNEASLTDLTDT
Disordered region (IsUnstruct)
********HWNALLLNLRELSDWVFRKDAELSRLGPIGGDINVLQ*****************AIIENSIL*****************
Disordered Region (DISOPRED)
*******EHWNALLLNLRELSDWVFRKDA***********INVLQKQEDDHRAFRRQLED*RAIIENSILSG***************
Disordered Region (DISEMBL)
********HWNALLLNLRELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLEDKRAIIENSILSGRQYLNEASLTDLTDT
Disordered Region (DISPRO)
*****NSEHWNALLLNLRELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLEDKRAIIENSILSGRQYLNEA********
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
NRLESNSEHWNALLLNLRELSDWVFRKDAELSRLGPIGGDINVxxxxxxxxxxxxxxxxxxxxxIENSILSGRQYLNEASLTDLTDT
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	87	2.2.26 [Sep-21-2011]
Q0KI50	1854	Dystrophin, isoform D OS=	yes	N/A	1.0	0.046	0.688	2e-29
Q9VDW3	1669	Dystrophin, isoform B OS=	no	N/A	1.0	0.052	0.688	5e-29
Q9VDW6	3598	Dystrophin, isoforms A/C/	no	N/A	1.0	0.024	0.688	8e-29
Q5GN48	3674	Dystrophin OS=Sus scrofa	yes	N/A	0.965	0.022	0.452	1e-13
O97592	3680	Dystrophin OS=Canis famil	yes	N/A	0.965	0.022	0.452	2e-13
P11531	3678	Dystrophin OS=Mus musculu	yes	N/A	0.965	0.022	0.452	2e-13
P11532	3685	Dystrophin OS=Homo sapien	yes	N/A	0.965	0.022	0.452	2e-13
P11533	3660	Dystrophin OS=Gallus gall	no	N/A	0.942	0.022	0.392	2e-11
P46939	3433	Utrophin OS=Homo sapiens	no	N/A	0.850	0.021	0.432	6e-11
Q13474	957	Dystrophin-related protei	no	N/A	0.954	0.086	0.325	5e-08

>sp|Q0KI50|DMDD_DROME Dystrophin, isoform D OS=Drosophila melanogaster GN=Dys PE=1 SV=1

 Score =  127 bits (318), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 62/90 (68%), Positives = 76/90 (84%), Gaps = 3/90 (3%)

Query: 1    NRLESNSEHWNALLLNLRELSDWVFRKDAELSR--LGPIGGDINVLQKQEDDHRAFRRQL 58
            NRLESNSEHWNALLL+LREL++WV RKD ELS   LGP+ GD   LQKQ DDH+AFRRQL
Sbjct: 929  NRLESNSEHWNALLLSLRELTEWVIRKDTELSTLGLGPVRGDAVSLQKQLDDHKAFRRQL 988

Query: 59   EDKRAIIENSILSGRQYL-NEASLTDLTDT 87
            EDKR I+E+++ SGRQY+ NEA+++D +DT
Sbjct: 989  EDKRPIVESNLTSGRQYIANEAAVSDTSDT 1018

Required for the maintenance of appropriate synaptic retrograde communication and the stabilization of muscle cell architecture or physiology. May play a role in anchoring the cytoskeleton to the plasma membrane.
Drosophila melanogaster (taxid: 7227)

>sp|Q9VDW3|DMDB_DROME Dystrophin, isoform B OS=Drosophila melanogaster GN=Dys PE=1 SV=3

 Score =  126 bits (316), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 62/90 (68%), Positives = 76/90 (84%), Gaps = 3/90 (3%)

Query: 1   NRLESNSEHWNALLLNLRELSDWVFRKDAELSR--LGPIGGDINVLQKQEDDHRAFRRQL 58
           NRLESNSEHWNALLL+LREL++WV RKD ELS   LGP+ GD   LQKQ DDH+AFRRQL
Sbjct: 744 NRLESNSEHWNALLLSLRELTEWVIRKDTELSTLGLGPVRGDAVSLQKQLDDHKAFRRQL 803

Query: 59  EDKRAIIENSILSGRQYL-NEASLTDLTDT 87
           EDKR I+E+++ SGRQY+ NEA+++D +DT
Sbjct: 804 EDKRPIVESNLTSGRQYIANEAAVSDTSDT 833

Required for the maintenance of appropriate synaptic retrograde communication and the stabilization of muscle cell architecture or physiology. May play a role in anchoring the cytoskeleton to the plasma membrane.

Drosophila melanogaster (taxid: 7227)

>sp|Q9VDW6|DMDA_DROME Dystrophin, isoforms A/C/F/G/H OS=Drosophila melanogaster GN=Dys PE=1 SV=3

 Score =  125 bits (314), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 62/90 (68%), Positives = 76/90 (84%), Gaps = 3/90 (3%)

Query: 1    NRLESNSEHWNALLLNLRELSDWVFRKDAELSR--LGPIGGDINVLQKQEDDHRAFRRQL 58
            NRLESNSEHWNALLL+LREL++WV RKD ELS   LGP+ GD   LQKQ DDH+AFRRQL
Sbjct: 2572 NRLESNSEHWNALLLSLRELTEWVIRKDTELSTLGLGPVRGDAVSLQKQLDDHKAFRRQL 2631

Query: 59   EDKRAIIENSILSGRQYL-NEASLTDLTDT 87
            EDKR I+E+++ SGRQY+ NEA+++D +DT
Sbjct: 2632 EDKRPIVESNLTSGRQYIANEAAVSDTSDT 2661

Required for the maintenance of appropriate synaptic retrograde communication and the stabilization of muscle cell architecture or physiology. Both det and Dg are required for maintenance of early dpp signaling in the presumptive crossvein. Isoform A is not required to maintain muscle integrity, but plays a role in neuromuscular homeostasis by regulating neurotransmitter release. May play a role in anchoring the cytoskeleton to the plasma membrane.

Drosophila melanogaster (taxid: 7227)

>sp|Q5GN48|DMD_PIG Dystrophin OS=Sus scrofa GN=DMD PE=1 SV=1

 Score = 74.7 bits (182), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 38/84 (45%), Positives = 55/84 (65%)

Query: 1    NRLESNSEHWNALLLNLRELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLED 60
            + LE++S+ W  L L+L+EL  W+  KD ELSR  PIGGD   +QKQ D HRAF+R+L+ 
Sbjct: 2787 SHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDCPAVQKQNDVHRAFKRELKT 2846

Query: 61   KRAIIENSILSGRQYLNEASLTDL 84
            K  +I +++ + R +L E  L  L
Sbjct: 2847 KEPVIMSTLETVRIFLTEQPLEGL 2870

Anchors the extracellular matrix to the cytoskeleton via F-actin. Ligand for dystroglycan. Component of the dystrophin-associated glycoprotein complex which accumulates at the neuromuscular junction (NMJ) and at a variety of synapses in the peripheral and central nervous systems and has a structural function in stabilizing the sarcolemma. Also implicated in signaling events and synaptic transmission.

Sus scrofa (taxid: 9823)

>sp|O97592|DMD_CANFA Dystrophin OS=Canis familiaris GN=DMD PE=2 SV=1

 Score = 74.7 bits (182), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 38/84 (45%), Positives = 55/84 (65%)

Query: 1    NRLESNSEHWNALLLNLRELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLED 60
            + LE++S+ W  L L+L+EL  W+  KD ELSR  PIGGD   +QKQ D HRAF+R+L+ 
Sbjct: 2793 SHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKT 2852

Query: 61   KRAIIENSILSGRQYLNEASLTDL 84
            K  +I +++ + R +L E  L  L
Sbjct: 2853 KEPVIMSTLETVRIFLTEQPLEGL 2876

Anchors the extracellular matrix to the cytoskeleton via F-actin. Ligand for dystroglycan. Component of the dystrophin-associated glycoprotein complex which accumulates at the neuromuscular junction (NMJ) and at a variety of synapses in the peripheral and central nervous systems and has a structural function in stabilizing the sarcolemma. Also implicated in signaling events and synaptic transmission.

Canis familiaris (taxid: 9615)

>sp|P11531|DMD_MOUSE Dystrophin OS=Mus musculus GN=Dmd PE=1 SV=3

 Score = 74.7 bits (182), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 38/84 (45%), Positives = 55/84 (65%)

Query: 1    NRLESNSEHWNALLLNLRELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLED 60
            + LE++S+ W  L L+L+EL  W+  KD ELSR  PIGGD   +QKQ D HRAF+R+L+ 
Sbjct: 2791 SHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDIHRAFKRELKT 2850

Query: 61   KRAIIENSILSGRQYLNEASLTDL 84
            K  +I +++ + R +L E  L  L
Sbjct: 2851 KEPVIMSTLETVRIFLTEQPLEGL 2874

Anchors the extracellular matrix to the cytoskeleton via F-actin. Ligand for dystroglycan. Component of the dystrophin-associated glycoprotein complex which accumulates at the neuromuscular junction (NMJ) and at a variety of synapses in the peripheral and central nervous systems and has a structural function in stabilizing the sarcolemma. Also implicated in signaling events and synaptic transmission.

Mus musculus (taxid: 10090)

>sp|P11532|DMD_HUMAN Dystrophin OS=Homo sapiens GN=DMD PE=1 SV=3

 Score = 74.7 bits (182), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 38/84 (45%), Positives = 55/84 (65%)

Query: 1    NRLESNSEHWNALLLNLRELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLED 60
            + LE++S+ W  L L+L+EL  W+  KD ELSR  PIGGD   +QKQ D HRAF+R+L+ 
Sbjct: 2798 SHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKT 2857

Query: 61   KRAIIENSILSGRQYLNEASLTDL 84
            K  +I +++ + R +L E  L  L
Sbjct: 2858 KEPVIMSTLETVRIFLTEQPLEGL 2881

Anchors the extracellular matrix to the cytoskeleton via F-actin. Ligand for dystroglycan. Component of the dystrophin-associated glycoprotein complex which accumulates at the neuromuscular junction (NMJ) and at a variety of synapses in the peripheral and central nervous systems and has a structural function in stabilizing the sarcolemma. Also implicated in signaling events and synaptic transmission.

Homo sapiens (taxid: 9606)

>sp|P11533|DMD_CHICK Dystrophin OS=Gallus gallus GN=DMD PE=2 SV=1

 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 33/84 (39%), Positives = 54/84 (64%)

Query: 1    NRLESNSEHWNALLLNLRELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLED 60
            + LE++++ W  L L+L+EL  W+  K+ EL +  PIGGDI  +QKQ D HR F+R+L+ 
Sbjct: 2795 SHLEASTDQWKRLHLSLQELLAWLQLKEDELKQQAPIGGDIPTVQKQNDVHRTFKRELKT 2854

Query: 61   KRAIIENSILSGRQYLNEASLTDL 84
            K  +I N++ + R +L +  +  L
Sbjct: 2855 KEPVIMNALETVRLFLADQPVEGL 2878

May play a role in anchoring the cytoskeleton to the plasma membrane.

Gallus gallus (taxid: 9031)

>sp|P46939|UTRO_HUMAN Utrophin OS=Homo sapiens GN=UTRN PE=1 SV=2

 Score = 66.2 bits (160), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 32/74 (43%), Positives = 48/74 (64%)

Query: 3    LESNSEHWNALLLNLRELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLEDKR 62
            LE+++E WN LL++L EL  W+  KD EL +  PIGGD+  LQ Q D  +A RR+L++K 
Sbjct: 2554 LEASAEKWNRLLMSLEELIKWLNMKDEELKKQMPIGGDVPALQLQYDHCKALRRELKEKE 2613

Query: 63   AIIENSILSGRQYL 76
              + N++   R +L
Sbjct: 2614 YSVLNAVDQARVFL 2627

May play a role in anchoring the cytoskeleton to the plasma membrane.

Homo sapiens (taxid: 9606)

>sp|Q13474|DRP2_HUMAN Dystrophin-related protein 2 OS=Homo sapiens GN=DRP2 PE=2 SV=2

 Score = 56.2 bits (134), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 27/83 (32%), Positives = 52/83 (62%)

Query: 2   RLESNSEHWNALLLNLRELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLEDK 61
           RLE+ S+H   L L L+E+ DW+ +KD ELS   P+ GD+ ++Q++++ H AF  +++ +
Sbjct: 96  RLEAFSDHSGKLQLPLQEIIDWLSQKDEELSAQLPLQGDVALVQQEKETHAAFMEEVKSR 155

Query: 62  RAIIENSILSGRQYLNEASLTDL 84
              I + + S + +L++    +L
Sbjct: 156 GPYIYSVLESAQAFLSQHPFEEL 178

Possibly involved in membrane-cytoskeleton interactions of the central nervous system.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	87
350413111	4082	PREDICTED: dystrophin, isoforms A/C/F/G/	1.0	0.021	0.704	8e-30
340709163	4082	PREDICTED: LOW QUALITY PROTEIN: dystroph	1.0	0.021	0.704	9e-30
328792482	4079	PREDICTED: dystrophin, isoforms A/C/F/G/	1.0	0.021	0.704	9e-30
380022121	4111	PREDICTED: LOW QUALITY PROTEIN: dystroph	1.0	0.021	0.704	9e-30
350413109	3622	PREDICTED: dystrophin, isoforms A/C/F/G/	1.0	0.024	0.704	9e-30
350413107	3658	PREDICTED: dystrophin, isoforms A/C/F/G/	1.0	0.023	0.704	1e-29
383862415	4129	PREDICTED: dystrophin, isoforms A/C/F/G/	1.0	0.021	0.693	2e-29
242011409	952	dystrophin, putative [Pediculus humanus	1.0	0.091	0.681	1e-28
62005614	1854	Dp205 [Drosophila melanogaster]	1.0	0.046	0.688	7e-28
390179609	1852	GA30238, isoform C [Drosophila pseudoobs	1.0	0.046	0.688	8e-28

>gi|350413111|ref|XP_003489883.1| PREDICTED: dystrophin, isoforms A/C/F/G/H-like isoform 3 [Bombus impatiens]

 Score =  134 bits (336), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 62/88 (70%), Positives = 75/88 (85%), Gaps = 1/88 (1%)

Query: 1    NRLESNSEHWNALLLNLRELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLED 60
            NRLESN+EHWNALLL+LREL +WV RKD EL+ LGP+ GD+  LQKQEDDHR FRRQLED
Sbjct: 3189 NRLESNTEHWNALLLSLRELIEWVIRKDTELTGLGPVCGDVAALQKQEDDHRGFRRQLED 3248

Query: 61   KRAIIENSILSGRQYL-NEASLTDLTDT 87
            KR I+EN++LSGRQY+ NE  L+D +D+
Sbjct: 3249 KRPIVENNLLSGRQYIANEPPLSDTSDS 3276

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340709163|ref|XP_003393182.1| PREDICTED: LOW QUALITY PROTEIN: dystrophin, isoforms A/C/F/G/H-like [Bombus terrestris]

 Score =  134 bits (336), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 62/88 (70%), Positives = 75/88 (85%), Gaps = 1/88 (1%)

Query: 1    NRLESNSEHWNALLLNLRELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLED 60
            NRLESN+EHWNALLL+LREL +WV RKD EL+ LGP+ GD+  LQKQEDDHR FRRQLED
Sbjct: 3189 NRLESNTEHWNALLLSLRELIEWVIRKDTELTGLGPVCGDVAALQKQEDDHRGFRRQLED 3248

Query: 61   KRAIIENSILSGRQYL-NEASLTDLTDT 87
            KR I+EN++LSGRQY+ NE  L+D +D+
Sbjct: 3249 KRPIVENNLLSGRQYIANEPPLSDTSDS 3276

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328792482|ref|XP_003251732.1| PREDICTED: dystrophin, isoforms A/C/F/G/H-like [Apis mellifera]

 Score =  134 bits (336), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 62/88 (70%), Positives = 75/88 (85%), Gaps = 1/88 (1%)

Query: 1    NRLESNSEHWNALLLNLRELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLED 60
            NRLESN+EHWNALLL+LREL +WV RKD EL+ LGP+ GD+  LQKQEDDHR FRRQLED
Sbjct: 3186 NRLESNTEHWNALLLSLRELIEWVIRKDTELTGLGPVCGDVAALQKQEDDHRGFRRQLED 3245

Query: 61   KRAIIENSILSGRQYL-NEASLTDLTDT 87
            KR I+EN++LSGRQY+ NE  L+D +D+
Sbjct: 3246 KRPIVENNLLSGRQYIANEPPLSDTSDS 3273

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380022121|ref|XP_003694902.1| PREDICTED: LOW QUALITY PROTEIN: dystrophin, isoforms A/C/F/G/H-like [Apis florea]

 Score =  134 bits (336), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 62/88 (70%), Positives = 75/88 (85%), Gaps = 1/88 (1%)

Query: 1    NRLESNSEHWNALLLNLRELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLED 60
            NRLESN+EHWNALLL+LREL +WV RKD EL+ LGP+ GD+  LQKQEDDHR FRRQLED
Sbjct: 3218 NRLESNTEHWNALLLSLRELIEWVIRKDTELTGLGPVCGDVAALQKQEDDHRGFRRQLED 3277

Query: 61   KRAIIENSILSGRQYL-NEASLTDLTDT 87
            KR I+EN++LSGRQY+ NE  L+D +D+
Sbjct: 3278 KRPIVENNLLSGRQYIANEPPLSDTSDS 3305

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350413109|ref|XP_003489882.1| PREDICTED: dystrophin, isoforms A/C/F/G/H-like isoform 2 [Bombus impatiens]

 Score =  134 bits (336), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 62/88 (70%), Positives = 75/88 (85%), Gaps = 1/88 (1%)

Query: 1    NRLESNSEHWNALLLNLRELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLED 60
            NRLESN+EHWNALLL+LREL +WV RKD EL+ LGP+ GD+  LQKQEDDHR FRRQLED
Sbjct: 2765 NRLESNTEHWNALLLSLRELIEWVIRKDTELTGLGPVCGDVAALQKQEDDHRGFRRQLED 2824

Query: 61   KRAIIENSILSGRQYL-NEASLTDLTDT 87
            KR I+EN++LSGRQY+ NE  L+D +D+
Sbjct: 2825 KRPIVENNLLSGRQYIANEPPLSDTSDS 2852

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350413107|ref|XP_003489881.1| PREDICTED: dystrophin, isoforms A/C/F/G/H-like isoform 1 [Bombus impatiens]

 Score =  134 bits (336), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 62/88 (70%), Positives = 75/88 (85%), Gaps = 1/88 (1%)

Query: 1    NRLESNSEHWNALLLNLRELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLED 60
            NRLESN+EHWNALLL+LREL +WV RKD EL+ LGP+ GD+  LQKQEDDHR FRRQLED
Sbjct: 2765 NRLESNTEHWNALLLSLRELIEWVIRKDTELTGLGPVCGDVAALQKQEDDHRGFRRQLED 2824

Query: 61   KRAIIENSILSGRQYL-NEASLTDLTDT 87
            KR I+EN++LSGRQY+ NE  L+D +D+
Sbjct: 2825 KRPIVENNLLSGRQYIANEPPLSDTSDS 2852

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383862415|ref|XP_003706679.1| PREDICTED: dystrophin, isoforms A/C/F/G/H-like [Megachile rotundata]

 Score =  132 bits (333), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 61/88 (69%), Positives = 75/88 (85%), Gaps = 1/88 (1%)

Query: 1    NRLESNSEHWNALLLNLRELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLED 60
            NRLESN+EHWNALLL+LREL +WV RKD EL+ LGP+ GD+  LQKQ+DDHR FRRQLED
Sbjct: 3236 NRLESNTEHWNALLLSLRELIEWVIRKDTELTGLGPVCGDVAALQKQQDDHRGFRRQLED 3295

Query: 61   KRAIIENSILSGRQYL-NEASLTDLTDT 87
            KR I+EN++LSGRQY+ NE  L+D +D+
Sbjct: 3296 KRPIVENNLLSGRQYIANEPPLSDTSDS 3323

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242011409|ref|XP_002426443.1| dystrophin, putative [Pediculus humanus corporis] gi|212510548|gb|EEB13705.1| dystrophin, putative [Pediculus humanus corporis]

 Score =  130 bits (327), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 60/88 (68%), Positives = 77/88 (87%), Gaps = 1/88 (1%)

Query: 1   NRLESNSEHWNALLLNLRELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLED 60
           NRLESN+EHWNALLL+LREL +WV RKD EL+ LGPIGGD+  L KQ+DDHRAFRRQLE+
Sbjct: 100 NRLESNTEHWNALLLSLRELIEWVIRKDTELTGLGPIGGDLASLHKQQDDHRAFRRQLEE 159

Query: 61  KRAIIENSILSGRQYL-NEASLTDLTDT 87
           KR ++E+++LSGRQY+ NE +L+D +D+
Sbjct: 160 KRPVVESNLLSGRQYIANEPALSDTSDS 187

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|62005614|gb|AAX59985.1| Dp205 [Drosophila melanogaster]

 Score =  127 bits (320), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 62/90 (68%), Positives = 76/90 (84%), Gaps = 3/90 (3%)

Query: 1    NRLESNSEHWNALLLNLRELSDWVFRKDAELSRLG--PIGGDINVLQKQEDDHRAFRRQL 58
            NRLESNSEHWNALLL+LREL++WV RKD ELS LG  P+ GD   LQKQ DDH+AFRRQL
Sbjct: 929  NRLESNSEHWNALLLSLRELTEWVIRKDTELSTLGLGPVRGDAASLQKQLDDHKAFRRQL 988

Query: 59   EDKRAIIENSILSGRQYL-NEASLTDLTDT 87
            EDKR I+E+++ SGRQY+ NEA+++D +DT
Sbjct: 989  EDKRPIVESNLTSGRQYIANEAAVSDTSDT 1018

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|390179609|ref|XP_003736938.1| GA30238, isoform C [Drosophila pseudoobscura pseudoobscura] gi|388859916|gb|EIM53011.1| GA30238, isoform C [Drosophila pseudoobscura pseudoobscura]

 Score =  127 bits (319), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 62/90 (68%), Positives = 76/90 (84%), Gaps = 3/90 (3%)

Query: 1    NRLESNSEHWNALLLNLRELSDWVFRKDAELSRLG--PIGGDINVLQKQEDDHRAFRRQL 58
            NRLESNSEHWNALLL+LREL++WV RKD ELS LG  P+ GD   LQKQ DDH+AFRRQL
Sbjct: 968  NRLESNSEHWNALLLSLRELTEWVIRKDTELSTLGLGPVRGDAASLQKQLDDHKAFRRQL 1027

Query: 59   EDKRAIIENSILSGRQYL-NEASLTDLTDT 87
            EDKR I+E+++ SGRQY+ NEA+++D +DT
Sbjct: 1028 EDKRPIVESNLTSGRQYIANEAAVSDTSDT 1057

Source: Drosophila pseudoobscura pseudoobscura

Species: Drosophila pseudoobscura

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	87
FB|FBgn0260003	3598	Dys "Dystrophin" [Drosophila m	1.0	0.024	0.688	2.9e-26
UNIPROTKB|F5GZY3	1115	DMD "Dystrophin" [Homo sapiens	0.965	0.075	0.452	7.8e-13
UNIPROTKB|E7EQR9	1133	DMD "Dystrophin" [Homo sapiens	0.965	0.074	0.452	7.9e-13
UNIPROTKB|E7EQS5	1225	DMD "Dystrophin" [Homo sapiens	0.965	0.068	0.452	8.8e-13
UNIPROTKB|F8VX32	1230	DMD "Dystrophin" [Homo sapiens	0.965	0.068	0.452	8.8e-13
UNIPROTKB|E7ESB2	1243	DMD "Dystrophin" [Homo sapiens	0.965	0.067	0.452	8.9e-13
UNIPROTKB|H0Y304	1386	DMD "Dystrophin" [Homo sapiens	0.965	0.060	0.452	1e-12
UNIPROTKB|H0Y8D5	1424	DMD "Dystrophin" [Homo sapiens	0.965	0.058	0.452	1.1e-12
UNIPROTKB|F1P7G4	3652	DMD "Dystrophin" [Canis lupus	0.965	0.023	0.452	3.1e-12
MGI|MGI:94909	3678	Dmd "dystrophin, muscular dyst	0.965	0.022	0.452	3.1e-12

FB|FBgn0260003 Dys "Dystrophin" [Drosophila melanogaster (taxid:7227)]

 Score = 315 (115.9 bits), Expect = 2.9e-26, P = 2.9e-26
 Identities = 62/90 (68%), Positives = 76/90 (84%)

Query:     1 NRLESNSEHWNALLLNLRELSDWVFRKDAELSRLG--PIGGDINVLQKQEDDHRAFRRQL 58
             NRLESNSEHWNALLL+LREL++WV RKD ELS LG  P+ GD   LQKQ DDH+AFRRQL
Sbjct:  2572 NRLESNSEHWNALLLSLRELTEWVIRKDTELSTLGLGPVRGDAVSLQKQLDDHKAFRRQL 2631

Query:    59 EDKRAIIENSILSGRQYL-NEASLTDLTDT 87
             EDKR I+E+++ SGRQY+ NEA+++D +DT
Sbjct:  2632 EDKRPIVESNLTSGRQYIANEAAVSDTSDT 2661

GO:0008586 "imaginal disc-derived wing vein morphogenesis" evidence=IMP

GO:0005856 "cytoskeleton" evidence=ISS

GO:0005198 "structural molecule activity" evidence=ISS

GO:0008307 "structural constituent of muscle" evidence=ISS

GO:0016010 "dystrophin-associated glycoprotein complex" evidence=ISS;NAS;IPI

GO:0008092 "cytoskeletal protein binding" evidence=ISS

GO:0003779 "actin binding" evidence=ISS

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0007517 "muscle organ development" evidence=ISS;IMP

GO:0005200 "structural constituent of cytoskeleton" evidence=ISS

GO:0007274 "neuromuscular synaptic transmission" evidence=IDA

GO:0048172 "regulation of short-term neuronal synaptic plasticity" evidence=IDA

GO:0046716 "muscle cell homeostasis" evidence=IMP

GO:0050699 "WW domain binding" evidence=IPI

GO:0030010 "establishment of cell polarity" evidence=IMP

GO:0007474 "imaginal disc-derived wing vein specification" evidence=IMP

GO:0046928 "regulation of neurotransmitter secretion" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

UNIPROTKB|F5GZY3 DMD "Dystrophin" [Homo sapiens (taxid:9606)]

 Score = 183 (69.5 bits), Expect = 7.8e-13, P = 7.8e-13
 Identities = 38/84 (45%), Positives = 55/84 (65%)

Query:     1 NRLESNSEHWNALLLNLRELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLED 60
             + LE++S+ W  L L+L+EL  W+  KD ELSR  PIGGD   +QKQ D HRAF+R+L+ 
Sbjct:   338 SHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKT 397

Query:    61 KRAIIENSILSGRQYLNEASLTDL 84
             K  +I +++ + R +L E  L  L
Sbjct:   398 KEPVIMSTLETVRIFLTEQPLEGL 421

GO:0005509 "calcium ion binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|E7EQR9 DMD "Dystrophin" [Homo sapiens (taxid:9606)]

 Score = 183 (69.5 bits), Expect = 7.9e-13, P = 7.9e-13
 Identities = 38/84 (45%), Positives = 55/84 (65%)

Query:     1 NRLESNSEHWNALLLNLRELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLED 60
             + LE++S+ W  L L+L+EL  W+  KD ELSR  PIGGD   +QKQ D HRAF+R+L+ 
Sbjct:   338 SHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKT 397

Query:    61 KRAIIENSILSGRQYLNEASLTDL 84
             K  +I +++ + R +L E  L  L
Sbjct:   398 KEPVIMSTLETVRIFLTEQPLEGL 421

GO:0005509 "calcium ion binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|E7EQS5 DMD "Dystrophin" [Homo sapiens (taxid:9606)]

 Score = 183 (69.5 bits), Expect = 8.8e-13, P = 8.8e-13
 Identities = 38/84 (45%), Positives = 55/84 (65%)

Query:     1 NRLESNSEHWNALLLNLRELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLED 60
             + LE++S+ W  L L+L+EL  W+  KD ELSR  PIGGD   +QKQ D HRAF+R+L+ 
Sbjct:   338 SHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKT 397

Query:    61 KRAIIENSILSGRQYLNEASLTDL 84
             K  +I +++ + R +L E  L  L
Sbjct:   398 KEPVIMSTLETVRIFLTEQPLEGL 421

GO:0005509 "calcium ion binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008065 "establishment of blood-nerve barrier" evidence=IEA

GO:0014904 "myotube cell development" evidence=IEA

GO:0016010 "dystrophin-associated glycoprotein complex" evidence=IEA

GO:0021629 "olfactory nerve structural organization" evidence=IEA

GO:0030018 "Z disc" evidence=IEA

GO:0030055 "cell-substrate junction" evidence=IEA

GO:0042383 "sarcolemma" evidence=IEA

GO:0044306 "neuron projection terminus" evidence=IEA

GO:0045121 "membrane raft" evidence=IEA

GO:0045202 "synapse" evidence=IEA

GO:0045213 "neurotransmitter receptor metabolic process" evidence=IEA

GO:0046716 "muscle cell homeostasis" evidence=IEA

GO:0048747 "muscle fiber development" evidence=IEA

GO:0050998 "nitric-oxide synthase binding" evidence=IEA

GO:0051647 "nucleus localization" evidence=IEA

GO:0060857 "establishment of glial blood-brain barrier" evidence=IEA

UNIPROTKB|F8VX32 DMD "Dystrophin" [Homo sapiens (taxid:9606)]

 Score = 183 (69.5 bits), Expect = 8.8e-13, P = 8.8e-13
 Identities = 38/84 (45%), Positives = 55/84 (65%)

Query:     1 NRLESNSEHWNALLLNLRELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLED 60
             + LE++S+ W  L L+L+EL  W+  KD ELSR  PIGGD   +QKQ D HRAF+R+L+ 
Sbjct:   338 SHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKT 397

Query:    61 KRAIIENSILSGRQYLNEASLTDL 84
             K  +I +++ + R +L E  L  L
Sbjct:   398 KEPVIMSTLETVRIFLTEQPLEGL 421

GO:0005509 "calcium ion binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|E7ESB2 DMD "Dystrophin" [Homo sapiens (taxid:9606)]

 Score = 183 (69.5 bits), Expect = 8.9e-13, P = 8.9e-13
 Identities = 38/84 (45%), Positives = 55/84 (65%)

Query:     1 NRLESNSEHWNALLLNLRELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLED 60
             + LE++S+ W  L L+L+EL  W+  KD ELSR  PIGGD   +QKQ D HRAF+R+L+ 
Sbjct:   338 SHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKT 397

Query:    61 KRAIIENSILSGRQYLNEASLTDL 84
             K  +I +++ + R +L E  L  L
Sbjct:   398 KEPVIMSTLETVRIFLTEQPLEGL 421

GO:0005509 "calcium ion binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|H0Y304 DMD "Dystrophin" [Homo sapiens (taxid:9606)]

 Score = 183 (69.5 bits), Expect = 1.0e-12, P = 1.0e-12
 Identities = 38/84 (45%), Positives = 55/84 (65%)

Query:     1 NRLESNSEHWNALLLNLRELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLED 60
             + LE++S+ W  L L+L+EL  W+  KD ELSR  PIGGD   +QKQ D HRAF+R+L+ 
Sbjct:   494 SHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKT 553

Query:    61 KRAIIENSILSGRQYLNEASLTDL 84
             K  +I +++ + R +L E  L  L
Sbjct:   554 KEPVIMSTLETVRIFLTEQPLEGL 577

GO:0005509 "calcium ion binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|H0Y8D5 DMD "Dystrophin" [Homo sapiens (taxid:9606)]

 Score = 183 (69.5 bits), Expect = 1.1e-12, P = 1.1e-12
 Identities = 38/84 (45%), Positives = 55/84 (65%)

Query:     1 NRLESNSEHWNALLLNLRELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLED 60
             + LE++S+ W  L L+L+EL  W+  KD ELSR  PIGGD   +QKQ D HRAF+R+L+ 
Sbjct:   527 SHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKT 586

Query:    61 KRAIIENSILSGRQYLNEASLTDL 84
             K  +I +++ + R +L E  L  L
Sbjct:   587 KEPVIMSTLETVRIFLTEQPLEGL 610

GO:0005509 "calcium ion binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|F1P7G4 DMD "Dystrophin" [Canis lupus familiaris (taxid:9615)]

 Score = 183 (69.5 bits), Expect = 3.1e-12, P = 3.1e-12
 Identities = 38/84 (45%), Positives = 55/84 (65%)

Query:     1 NRLESNSEHWNALLLNLRELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLED 60
             + LE++S+ W  L L+L+EL  W+  KD ELSR  PIGGD   +QKQ D HRAF+R+L+ 
Sbjct:  2765 SHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKT 2824

Query:    61 KRAIIENSILSGRQYLNEASLTDL 84
             K  +I +++ + R +L E  L  L
Sbjct:  2825 KEPVIMSTLETVRIFLTEQPLEGL 2848

GO:0003779 "actin binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

MGI|MGI:94909 Dmd "dystrophin, muscular dystrophy" [Mus musculus (taxid:10090)]

 Score = 183 (69.5 bits), Expect = 3.1e-12, P = 3.1e-12
 Identities = 38/84 (45%), Positives = 55/84 (65%)

Query:     1 NRLESNSEHWNALLLNLRELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLED 60
             + LE++S+ W  L L+L+EL  W+  KD ELSR  PIGGD   +QKQ D HRAF+R+L+ 
Sbjct:  2791 SHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDIHRAFKRELKT 2850

Query:    61 KRAIIENSILSGRQYLNEASLTDL 84
             K  +I +++ + R +L E  L  L
Sbjct:  2851 KEPVIMSTLETVRIFLTEQPLEGL 2874

GO:0002027 "regulation of heart rate" evidence=ISO

GO:0002162 "dystroglycan binding" evidence=ISO

GO:0003779 "actin binding" evidence=ISO

GO:0005178 "integrin binding" evidence=ISO

GO:0005515 "protein binding" evidence=IPI

GO:0005634 "nucleus" evidence=ISO

GO:0005737 "cytoplasm" evidence=IEA

GO:0005856 "cytoskeleton" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISO;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IMP

GO:0007517 "muscle organ development" evidence=IMP

GO:0007519 "skeletal muscle tissue development" evidence=IGI;IMP

GO:0008065 "establishment of blood-nerve barrier" evidence=IMP

GO:0008270 "zinc ion binding" evidence=IEA

GO:0008307 "structural constituent of muscle" evidence=ISO

GO:0009986 "cell surface" evidence=ISO

GO:0010468 "regulation of gene expression" evidence=IMP

GO:0010976 "positive regulation of neuron projection development" evidence=ISO

GO:0014904 "myotube cell development" evidence=IMP

GO:0016010 "dystrophin-associated glycoprotein complex" evidence=ISO;IDA

GO:0016020 "membrane" evidence=IEA

GO:0017022 "myosin binding" evidence=ISO

GO:0017166 "vinculin binding" evidence=ISO

GO:0021629 "olfactory nerve structural organization" evidence=IMP

GO:0030016 "myofibril" evidence=ISO

GO:0030018 "Z disc" evidence=IDA

GO:0030054 "cell junction" evidence=IEA

GO:0030055 "cell-substrate junction" evidence=IDA

GO:0030165 "PDZ domain binding" evidence=ISO

GO:0030175 "filopodium" evidence=ISO

GO:0032403 "protein complex binding" evidence=ISO

GO:0034613 "cellular protein localization" evidence=ISO

GO:0042383 "sarcolemma" evidence=ISO;IDA

GO:0043034 "costamere" evidence=ISO

GO:0043043 "peptide biosynthetic process" evidence=ISO

GO:0043234 "protein complex" evidence=ISO

GO:0044306 "neuron projection terminus" evidence=IDA

GO:0045121 "membrane raft" evidence=ISO;IDA

GO:0045202 "synapse" evidence=IDA

GO:0045211 "postsynaptic membrane" evidence=IEA

GO:0045213 "neurotransmitter receptor metabolic process" evidence=IMP

GO:0045666 "positive regulation of neuron differentiation" evidence=ISO

GO:0046716 "muscle cell homeostasis" evidence=IMP

GO:0046872 "metal ion binding" evidence=IEA

GO:0048747 "muscle fiber development" evidence=IGI

GO:0048812 "neuron projection morphogenesis" evidence=ISO

GO:0050998 "nitric-oxide synthase binding" evidence=IPI

GO:0051647 "nucleus localization" evidence=IMP

GO:0060048 "cardiac muscle contraction" evidence=ISO

GO:0060857 "establishment of glial blood-brain barrier" evidence=IMP

GO:0090287 "regulation of cellular response to growth factor stimulus" evidence=ISO

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q0KI50	DMDD_DROME	No assigned EC number	0.6888	1.0	0.0469	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	87
KOG4286|consensus	966		99.97
smart00150	101	SPEC Spectrin repeats.	99.31
PF00435	105	Spectrin: Spectrin repeat; InterPro: IPR002017 Spe	99.03
cd00176	213	SPEC Spectrin repeats, found in several proteins i	98.95
cd00176	213	SPEC Spectrin repeats, found in several proteins i	98.92
KOG0517|consensus	2473		96.31
KOG0517|consensus	2473		91.99
KOG0040|consensus	2399		82.93

>KOG4286|consensus

Probab=99.97  E-value=9.8e-31  Score=223.04  Aligned_cols=85  Identities=45%  Similarity=0.759  Sum_probs=83.2

Q ss_pred             ChhhhhhHHHHHHHHHHHHHHHHHHhhhHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHhhhcCC
Q psy11245          1 NRLESNSEHWNALLLNLRELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLEDKRAIIENSILSGRQYLNEAS   80 (87)
Q Consensus         1 ~rLE~~~~~w~~L~~sLqELl~Wl~~kd~eL~~q~PigGDv~~Vq~Q~~~Hk~f~rEL~~k~~~V~~~L~s~r~fl~~~p   80 (87)
                      +|||+++++|++|+++|+|||.||..||++|++|+||||||++||+|.++|+|||||||+|+|+|+|++++||.||+++|
T Consensus        92 ~~lea~~~~w~kl~~~l~el~~wl~~kd~el~~q~p~ggd~~avq~q~~~~~a~~re~k~k~~~~~s~~e~a~~fl~~~p  171 (966)
T KOG4286|consen   92 SHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKRELKTKEPVIMSTLETARIFLTEQP  171 (966)
T ss_pred             HHHHHHHHHHHHHhhhHHHHHHHHHhhhHHHHhcCCCCCChHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHHHHhcCC
Confidence            58999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCc
Q psy11245         81 LTDLT   85 (87)
Q Consensus        81 l~~~~   85 (87)
                      |++++
T Consensus       172 ~e~~e  176 (966)
T KOG4286|consen  172 LEGLE  176 (966)
T ss_pred             Ccchh
Confidence            99864

>smart00150 SPEC Spectrin repeats

Probab=99.31  E-value=2.7e-11  Score=74.43  Aligned_cols=68  Identities=25%  Similarity=0.393  Sum_probs=62.4

Q ss_pred             HHHHHHHHHHHHHHhhhHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHhhhcCC
Q psy11245         12 ALLLNLRELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLEDKRAIIENSILSGRQYLNEAS   80 (87)
Q Consensus        12 ~L~~sLqELl~Wl~~kd~eL~~q~PigGDv~~Vq~Q~~~Hk~f~rEL~~k~~~V~~~L~s~r~fl~~~p   80 (87)
                      +|...+.+|+.||..++..|. ..|+|+|++.|+.++..|++|++++..+++.|.++...|+.|+..+|
T Consensus         2 ~f~~~~~~l~~Wl~~~e~~l~-~~~~~~d~~~~~~~~~~~~~~~~e~~~~~~~v~~~~~~~~~L~~~~~   69 (101)
T smart00150        2 QFLRDADELEAWLSEKEALLA-SEDLGKDLESVEALLKKHEALEAELEAHEERVEALNELGEQLIEEGH   69 (101)
T ss_pred             chHHHHHHHHHHHHHHHHHHh-CCCCCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCC
Confidence            478889999999999997665 58999999999999999999999999999999999999999996544

>PF00435 Spectrin: Spectrin repeat; InterPro: IPR002017 Spectrin repeats [] are found in several proteins involved in cytoskeletal structure

Probab=99.03  E-value=3.1e-09  Score=65.19  Aligned_cols=71  Identities=23%  Similarity=0.448  Sum_probs=65.2

Q ss_pred             HHHHHHHHHHHHHHHHHhhhHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHhhhcCC
Q psy11245          9 HWNALLLNLRELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLEDKRAIIENSILSGRQYLNEAS   80 (87)
Q Consensus         9 ~w~~L~~sLqELl~Wl~~kd~eL~~q~PigGDv~~Vq~Q~~~Hk~f~rEL~~k~~~V~~~L~s~r~fl~~~p   80 (87)
                      .|.+|...+.++..||..++..|....+ |+|+..++.++..|+.|+.++..+++-|..+.+.|..+++.+|
T Consensus         2 ~~~~f~~~~~~l~~Wl~~~e~~l~~~~~-~~~~~~~~~~~~~~~~~~~ei~~~~~~l~~l~~~~~~L~~~~~   72 (105)
T PF00435_consen    2 QLQQFQQEADELLDWLQETEAKLSSSEP-GSDLEELEEQLKKHKELQEEIESRQERLESLNEQAQQLIDSGP   72 (105)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHCSCTH-SSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhCCCC-CCCHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHcCC
Confidence            5889999999999999999999955444 9999999999999999999999999999999999999986554

These include spectrin alpha and beta subunits [, ], alpha-actinin [] and dystrophin. The spectrin repeat forms a three-helix bundle. The second helix is interrupted by proline in some sequences. The repeats are defined by a characteristic tryptophan (W) residue at position 17 in helix A and a leucine (L) at 2 residues from the carboxyl end of helix C.; GO: 0005515 protein binding; PDB: 1HCI_A 1QUU_A 3FB2_B 1S35_A 1U5P_A 1U4Q_A 1CUN_B 1YDI_B 3EDV_A 1AJ3_A ....

>cd00176 SPEC Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; the repeats are independent folding units; tandem repeats are found in differing numbers and arrange in an antiparallel manner to form dimers; the repeats are defined by a characteristic tryptophan (W) residue in helix A and a leucine (L) at the carboxyl end of helix C and separated by a linker of 5 residues; two copies of the repeat are present here

Probab=98.95  E-value=7.8e-09  Score=69.91  Aligned_cols=71  Identities=21%  Similarity=0.293  Sum_probs=67.0

Q ss_pred             HHHHHHHHHHHHHHHHHhhhHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHhhhcCC
Q psy11245          9 HWNALLLNLRELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLEDKRAIIENSILSGRQYLNEAS   80 (87)
Q Consensus         9 ~w~~L~~sLqELl~Wl~~kd~eL~~q~PigGDv~~Vq~Q~~~Hk~f~rEL~~k~~~V~~~L~s~r~fl~~~p   80 (87)
                      .|.+|...+++++.||..++..|....|.+ |+..+++++..|++|++++..+.+.|..+...|+.++...+
T Consensus         1 ~~~~f~~~~~~l~~Wl~~~e~~l~~~~~~~-d~~~~~~~l~~~~~~~~e~~~~~~~~~~l~~~~~~L~~~~~   71 (213)
T cd00176           1 KLQQFLRDADELEAWLSEKEELLSSTDYGD-DLESVEALLKKHEALEAELAAHEERVEALNELGEQLIEEGH   71 (213)
T ss_pred             CHHHHHHhHHHHHHHHHHHHHHhcCcccCC-CHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHhcCC
Confidence            378999999999999999999999998877 99999999999999999999999999999999999997654

>cd00176 SPEC Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; the repeats are independent folding units; tandem repeats are found in differing numbers and arrange in an antiparallel manner to form dimers; the repeats are defined by a characteristic tryptophan (W) residue in helix A and a leucine (L) at the carboxyl end of helix C and separated by a linker of 5 residues; two copies of the repeat are present here

Probab=98.92  E-value=1.6e-08  Score=68.42  Aligned_cols=77  Identities=18%  Similarity=0.230  Sum_probs=70.3

Q ss_pred             hhhhhhHHHHHHHHHHHHHHHHHHhhhHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHhhhcCC
Q psy11245          2 RLESNSEHWNALLLNLRELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLEDKRAIIENSILSGRQYLNEAS   80 (87)
Q Consensus         2 rLE~~~~~w~~L~~sLqELl~Wl~~kd~eL~~q~PigGDv~~Vq~Q~~~Hk~f~rEL~~k~~~V~~~L~s~r~fl~~~p   80 (87)
                      +|+...+.|..++...+ +..|+..++..|....|++ |++.+++++..|++|++++..+++.|.++.+.|..++...+
T Consensus       101 ~L~~~~~~~~~~~~~~~-l~~wl~~~e~~l~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  177 (213)
T cd00176         101 RLEEALDLQQFFRDADD-LEQWLEEKEAALASEDLGK-DLESVEELLKKHKELEEELEAHEPRLKSLNELAEELLEEGH  177 (213)
T ss_pred             HHHHHHHHHHHHHHHHH-HHHHHHHHHHHhcCcccCC-CHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHcCC
Confidence            68888999999988776 9999999999999877766 99999999999999999999999999999999999995444

>KOG0517|consensus

Probab=96.31  E-value=0.027  Score=54.03  Aligned_cols=80  Identities=21%  Similarity=0.428  Sum_probs=68.0

Q ss_pred             ChhhhhhHHHHHHHHHHHHHHHHHHhhhHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHhh-hcC
Q psy11245          1 NRLESNSEHWNALLLNLRELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLEDKRAIIENSILSGRQYL-NEA   79 (87)
Q Consensus         1 ~rLE~~~~~w~~L~~sLqELl~Wl~~kd~eL~~q~PigGDv~~Vq~Q~~~Hk~f~rEL~~k~~~V~~~L~s~r~fl-~~~   79 (87)
                      +|||.+-.-|. |.--..|--.||.-|+.=++ -.-.|+|+.+|..-...||+|..||..+.+....++..|+.++ ..|
T Consensus       624 arLE~sr~l~~-F~~d~~EeEaWlkEkeqi~~-sa~~g~DLs~v~~ll~kHKalE~E~~~~~a~~~~~~~~G~~Lvae~~  701 (2473)
T KOG0517|consen  624 ARLEESRRLWQ-FLWDVEEEEAWLKEKEQILS-SADTGRDLSSVLRLLQKHKALEDEMRGRDAHLKQMIREGEELVAEGH  701 (2473)
T ss_pred             HHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhh-cccccccHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhcCC
Confidence            47888877775 45567888999998876555 5778999999999999999999999999999999999999999 455


Q ss_pred             CCC
Q psy11245         80 SLT   82 (87)
Q Consensus        80 pl~   82 (87)
                      |-+
T Consensus       702 pg~  704 (2473)
T KOG0517|consen  702 PGS  704 (2473)
T ss_pred             CCC
Confidence            533

>KOG0517|consensus

Probab=91.99  E-value=0.6  Score=45.42  Aligned_cols=70  Identities=10%  Similarity=0.289  Sum_probs=52.5

Q ss_pred             HHHHHHHHHHHHHHHHhhhHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHhhh-cCC
Q psy11245         10 WNALLLNLRELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLEDKRAIIENSILSGRQYLN-EAS   80 (87)
Q Consensus        10 w~~L~~sLqELl~Wl~~kd~eL~~q~PigGDv~~Vq~Q~~~Hk~f~rEL~~k~~~V~~~L~s~r~fl~-~~p   80 (87)
                      |-+|.--+..=+-||..+-| +...+..|-++++||.-...|+.++.|++.|+|-|..++..|+.+++ .||
T Consensus      1482 ~hQf~~dvddE~~WV~ErlP-~A~s~d~G~~L~~~q~l~KK~q~Lq~EI~~H~prI~~vl~~gq~Li~~~h~ 1552 (2473)
T KOG0517|consen 1482 LHQFVRDVDDELLWVAERLP-LASSTDYGENLQTVQSLHKKNQTLQAEIKGHQPRINDVLERGQSLIDSGHP 1552 (2473)
T ss_pred             HHHHHHhhhHHHHHHHhhCc-cCCchhhccChHHHHHHHHHhHHHHHHHHhcchHHHHHHHHhHHHHhcCCc
Confidence            44444444444555544433 33445568899999999999999999999999999999999999884 444

>KOG0040|consensus

Probab=82.93  E-value=5.1  Score=39.10  Aligned_cols=63  Identities=11%  Similarity=0.289  Sum_probs=54.3

Q ss_pred             HHHHHHHHhhhHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHhh-hcCCC
Q psy11245         18 RELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLEDKRAIIENSILSGRQYL-NEASL   81 (87)
Q Consensus        18 qELl~Wl~~kd~eL~~q~PigGDv~~Vq~Q~~~Hk~f~rEL~~k~~~V~~~L~s~r~fl-~~~pl   81 (87)
                      .+++.|+.-|+.=.+. ..+|-|+.-|.-.......|+.||.+++..|..+-..|--++ .+||=
T Consensus       159 ~~i~~wi~dke~~~t~-~e~g~d~e~~evl~~kf~~f~~~~~~~e~rv~evnq~a~~~~~e~h~e  222 (2399)
T KOG0040|consen  159 EDILEWIGDKEAIVTS-EELGQDLEHVEVLQKKFEDFQKELAAHEYRVNEVNQYADKLVEEGHPE  222 (2399)
T ss_pred             HHHHHHhccchheeeH-HHhcccHHHHHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHHcCCCc
Confidence            5799999999876654 468999998888888888999999999999999999999998 67773

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	87
3uul_A	118	Utrophin; spectrin repeat, structural protein, cyt	99.62
3uun_A	119	Dystrophin; triple helical, cell structure and sta	99.6
1u5p_A	216	Spectrin alpha chain, brain; alpha spectrin, two r	99.28
3f31_A	149	Spectrin alpha chain, brain; LONE helix followed b	99.19
1cun_A	213	Protein (alpha spectrin); two repeats of spectrin,	99.18
1quu_A	250	Human skeletal muscle alpha-actinin 2; triple-heli	99.14
1cun_A	213	Protein (alpha spectrin); two repeats of spectrin,	99.12
3fb2_A	218	Spectrin alpha chain, brain spectrin; non-erythroi	99.1
1u4q_A	322	Spectrin alpha chain, brain; alpha spectrin, three	99.07
1u5p_A	216	Spectrin alpha chain, brain; alpha spectrin, two r	99.07
1s35_A	214	Beta-I spectrin, spectrin beta chain, erythrocyte;	99.07
3edv_A	323	Spectrin beta chain, brain 1; spectrin repeat, coi	99.07
3lbx_A	161	Spectrin alpha chain, erythrocyte; tetramer, compl	99.06
3edv_A	323	Spectrin beta chain, brain 1; spectrin repeat, coi	99.05
1s35_A	214	Beta-I spectrin, spectrin beta chain, erythrocyte;	99.05
3edu_A	218	Beta-I spectrin, spectrin beta chain, erythrocyte;	99.01
1u4q_A	322	Spectrin alpha chain, brain; alpha spectrin, three	98.99
3edu_A	218	Beta-I spectrin, spectrin beta chain, erythrocyte;	98.96
3kbt_A	326	Beta-I spectrin, spectrin beta chain, erythrocyte;	98.95
3kbt_A	326	Beta-I spectrin, spectrin beta chain, erythrocyte;	98.92
1hci_A	476	Alpha-actinin 2; triple-helix coiled coil, contrac	98.83
3lbx_B	185	Beta-I spectrin, spectrin beta chain, erythrocyte;	98.75
3fb2_A	218	Spectrin alpha chain, brain spectrin; non-erythroi	98.7
1hci_A	476	Alpha-actinin 2; triple-helix coiled coil, contrac	98.63
2iak_A	224	Bullous pemphigoid antigen 1, isoform 5; triple he	98.62
1sjj_A	863	Actinin; 3-helix bundle, calponin homology domain,	98.5
2iak_A	224	Bullous pemphigoid antigen 1, isoform 5; triple he	98.47
2spc_A	107	Spectrin; cytoskeleton; 1.80A {Drosophila melanoga	98.45
3lbx_B	185	Beta-I spectrin, spectrin beta chain, erythrocyte;	98.35
3pdy_A	210	Plectin; cytoskeleton, plakin, intermediate filame	98.33
3pdy_A	210	Plectin; cytoskeleton, plakin, intermediate filame	98.24
1quu_A	250	Human skeletal muscle alpha-actinin 2; triple-heli	98.21
3pe0_A	283	Plectin; cytoskeleton, plakin, spectrin repeat, SH	98.1
3r6n_A	450	Desmoplakin; spectrin repeat, SH3 domain, cell adh	97.66
1sjj_A	863	Actinin; 3-helix bundle, calponin homology domain,	97.61
3r6n_A	450	Desmoplakin; spectrin repeat, SH3 domain, cell adh	96.43
2odv_A	235	Plectin 1, HD1; plakin domain, spectrin repeat, cy	95.87
3pe0_A	283	Plectin; cytoskeleton, plakin, spectrin repeat, SH	95.3
1g8x_A	1010	Myosin II heavy chain fused to alpha-actinin 3; mo	94.62
1wlx_A	129	Alpha-actinin 4; three-helix bundle, protein bindi	93.96
2ycu_A	995	Non muscle myosin 2C, alpha-actinin; motor protein	87.25
1g8x_A	1010	Myosin II heavy chain fused to alpha-actinin 3; mo	80.34

>3uul_A Utrophin; spectrin repeat, structural protein, cytoskeletal, helical bundle; 1.95A {Rattus norvegicus} PDB: 3uum_A

Probab=99.62  E-value=5.6e-15  Score=94.35  Aligned_cols=72  Identities=17%  Similarity=0.405  Sum_probs=68.1

Q ss_pred             HHHHHHHHHHHHHHHHhhhHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHhhhcCCC
Q psy11245         10 WNALLLNLRELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLEDKRAIIENSILSGRQYLNEASL   81 (87)
Q Consensus        10 w~~L~~sLqELl~Wl~~kd~eL~~q~PigGDv~~Vq~Q~~~Hk~f~rEL~~k~~~V~~~L~s~r~fl~~~pl   81 (87)
                      ..+|+.+|++|+.||..++..|+...|+|+|+++|+.|+..|++|+.||.++++.|.++...|+.|+...+.
T Consensus         4 L~~f~~~l~el~~WL~e~e~~l~~~~~~~~d~~~v~~~l~~h~~l~~ei~~~~~~v~~v~~~g~~L~~~~~~   75 (118)
T 3uul_A            4 LDSYQIALEEVLTWLLSAEDTFQEQDDISDDVEDVKEQFATHETFMMELSAHQSSVGSVLQAGNQLMTQGTL   75 (118)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTSCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            468999999999999999999999999999999999999999999999999999999999999999965543

>3uun_A Dystrophin; triple helical, cell structure and stability, cytoskeletal, structural protein; 2.30A {Homo sapiens}

Probab=99.60  E-value=1.1e-14  Score=92.61  Aligned_cols=72  Identities=18%  Similarity=0.386  Sum_probs=68.5

Q ss_pred             HHHHHHHHHHHHHHHHHhhhHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHhhhcCC
Q psy11245          9 HWNALLLNLRELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLEDKRAIIENSILSGRQYLNEAS   80 (87)
Q Consensus         9 ~w~~L~~sLqELl~Wl~~kd~eL~~q~PigGDv~~Vq~Q~~~Hk~f~rEL~~k~~~V~~~L~s~r~fl~~~p   80 (87)
                      +..+|+.++++|+.||..++..|+...|+|+|+++|+.|+..|++|+.||.++++.|.++...|+.|+..++
T Consensus         3 ~L~~F~~~l~el~~WL~~~e~~l~~~~~~~~d~~~v~~~l~~h~~l~~ei~~~~~~v~~~~~~g~~L~~~~~   74 (119)
T 3uun_A            3 NLDRYQTALEEVLSWLLSAEDTLQAQGEISNDVEVVKDQFHTHEGYMMDLTAHQGRVGNILQLGSKLIGTGK   74 (119)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHCSCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCC
Confidence            467899999999999999999999999999999999999999999999999999999999999999996544

>1u5p_A Spectrin alpha chain, brain; alpha spectrin, two repeats of spectrin, alpha-helical linker region, 3-helix coiled coil, structural protein; 2.00A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1

Probab=99.28  E-value=4.6e-11  Score=82.73  Aligned_cols=77  Identities=14%  Similarity=0.354  Sum_probs=68.7

Q ss_pred             hhhhhhHHHHHHHHHHHHHHHHHHhhhHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHhhhcCC
Q psy11245          2 RLESNSEHWNALLLNLRELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLEDKRAIIENSILSGRQYLNEAS   80 (87)
Q Consensus         2 rLE~~~~~w~~L~~sLqELl~Wl~~kd~eL~~q~PigGDv~~Vq~Q~~~Hk~f~rEL~~k~~~V~~~L~s~r~fl~~~p   80 (87)
                      +||.+.. ..+|...+++++.||..+++.++ ..|+|+|+++|+.++..|++|+.|+..+++.|.++...|+.++..++
T Consensus       104 ~Le~~~~-l~qf~~~~~~~~~Wl~e~e~~~~-~~~~g~dl~~v~~ll~kh~~~~~el~~~~~~i~~l~~~g~~L~~~~~  180 (216)
T 1u5p_A          104 KLNESHR-LHQFFRDMDDEESWIKEKKLLVS-SEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQGVLDTGKKLSDDNT  180 (216)
T ss_dssp             HHHHHHH-HHHHHHHHHHHHHHHHHHHHHHT-CCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCS
T ss_pred             HHHHHHH-HHHHHHHHHHHHhHHHHHHHHhc-CcccCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Confidence            5776655 56789999999999999998654 68999999999999999999999999999999999999999995544

>3f31_A Spectrin alpha chain, brain; LONE helix followed by A triple helical bundle, actin cappin binding, alternative splicing, calcium; 2.30A {Homo sapiens} SCOP: a.7.1.0

Probab=99.19  E-value=7.2e-11  Score=80.15  Aligned_cols=76  Identities=21%  Similarity=0.267  Sum_probs=69.0

Q ss_pred             hhhhhhHHHHHHHHHHHHHHHHHHhhhHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHhhhcCC
Q psy11245          2 RLESNSEHWNALLLNLRELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLEDKRAIIENSILSGRQYLNEAS   80 (87)
Q Consensus         2 rLE~~~~~w~~L~~sLqELl~Wl~~kd~eL~~q~PigGDv~~Vq~Q~~~Hk~f~rEL~~k~~~V~~~L~s~r~fl~~~p   80 (87)
                      +||.+. .+.+|...+.|+..||..|+.-++.  |.+||+..|+.++..|++|+.||.++++.|.++...|+.++..++
T Consensus        41 ~Le~s~-~l~~F~~d~~el~~Wi~ek~~~~~~--~~~~d~~~v~~~l~kH~afe~El~a~~~~l~~v~~~g~~Li~~~~  116 (149)
T 3f31_A           41 KLEDSY-RFQFFQRDAEELEKWIQEKLQIASD--ENYKDPTNLQGKLQKHQAFEAEVQANSGAIVKLDETGNLMISEGH  116 (149)
T ss_dssp             HHHHHH-HHHHHHHHHHHHHHHHHHHHHHTTS--CSSCSSSCHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTC
T ss_pred             HHHHHH-HHHHHHHHHHHHHHHHHHHHHHHcC--cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            688888 5999999999999999999987544  566999999999999999999999999999999999999996655

>1cun_A Protein (alpha spectrin); two repeats of spectrin, alpha helical linker region, 2 tandem 3-helix coiled- coils, structural protein; 2.00A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 PDB: 1aj3_A

Probab=99.18  E-value=1.6e-10  Score=79.44  Aligned_cols=69  Identities=14%  Similarity=0.367  Sum_probs=63.6

Q ss_pred             HHHHHHHHHHHHHHHhhhHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHhhhcCC
Q psy11245         11 NALLLNLRELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLEDKRAIIENSILSGRQYLNEAS   80 (87)
Q Consensus        11 ~~L~~sLqELl~Wl~~kd~eL~~q~PigGDv~~Vq~Q~~~Hk~f~rEL~~k~~~V~~~L~s~r~fl~~~p   80 (87)
                      .+|...+.+++.||..+++.|+. .|+|+|+++|++++..|++|+.||..+++.|.+++..|+.++..++
T Consensus         3 ~qf~~~~~~~~~Wl~e~e~~l~~-~~~g~dl~~v~~ll~kh~~~~~ei~~~~~~v~~v~~~g~~L~~~~~   71 (213)
T 1cun_A            3 HQFFRDMDDEESWIKEKKLLVSS-EDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQSVLDTGKKLSDDNT   71 (213)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTC-CCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHhHHHHHHHHhcC-cccCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Confidence            46888999999999999988775 7999999999999999999999999999999999999999995543

>1quu_A Human skeletal muscle alpha-actinin 2; triple-helix coiled coil, contractIle protein; 2.50A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1

Probab=99.14  E-value=3.6e-10  Score=80.90  Aligned_cols=70  Identities=11%  Similarity=0.152  Sum_probs=67.2

Q ss_pred             HHHHHHHHHHHHHHHHhhhHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHhhhcC
Q psy11245         10 WNALLLNLRELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLEDKRAIIENSILSGRQYLNEA   79 (87)
Q Consensus        10 w~~L~~sLqELl~Wl~~kd~eL~~q~PigGDv~~Vq~Q~~~Hk~f~rEL~~k~~~V~~~L~s~r~fl~~~   79 (87)
                      ..+|.....++..||..|++.|+...+||+|+.+|+..+..|++|+.+|..+++.|..+...|+.++..+
T Consensus        16 ~~~F~~~~~e~~~Wl~e~e~~l~~~~~~g~dl~~v~~llkkh~~~~~el~~~~~~v~~l~~~~~~L~~~~   85 (250)
T 1quu_A           16 AEKFRQKASTHETWAYGKEQILLQKDYESASLTEVRALLRKHEAFESDLAAHQDRVEQIAAIAQELNELD   85 (250)
T ss_dssp             HHHHHHHHHHHHHHTTTHHHHHHCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHhHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            7899999999999999999999999999999999999999999999999999999999999999999544

>1cun_A Protein (alpha spectrin); two repeats of spectrin, alpha helical linker region, 2 tandem 3-helix coiled- coils, structural protein; 2.00A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 PDB: 1aj3_A

Probab=99.12  E-value=6.6e-10  Score=76.31  Aligned_cols=77  Identities=18%  Similarity=0.373  Sum_probs=68.5

Q ss_pred             hhhhhhHHHHHHHHHHHHHHHHHHhhhHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHhhhcCC
Q psy11245          2 RLESNSEHWNALLLNLRELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLEDKRAIIENSILSGRQYLNEAS   80 (87)
Q Consensus         2 rLE~~~~~w~~L~~sLqELl~Wl~~kd~eL~~q~PigGDv~~Vq~Q~~~Hk~f~rEL~~k~~~V~~~L~s~r~fl~~~p   80 (87)
                      +||.+.+ ..+|.....++..||..+++.++. .++|+|++.|+.++..|++|++++..+++.|.++...|+.++..++
T Consensus       101 ~Le~~~~-~~~f~~~~~e~~~Wl~~~e~~l~~-~~~g~~~~~v~~ll~~h~~~~~el~~~~~~i~~l~~~~~~L~~~~~  177 (213)
T 1cun_A          101 RLEESLE-YQQFVANVEEEEAWINEKMTLVAS-EDYGDTLAAIQGLLKKHEAFETDFTVHKDRVNDVCANGEDLIKKNN  177 (213)
T ss_dssp             HHHHHHH-HHHHHHHHHHHHHHHHHHHHHHTC-CCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred             HHHHHHH-HHHHHHHHHHHHHHHHHHHHHhhC-CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence            5676664 478889999999999999988765 5899999999999999999999999999999999999999995443

>3fb2_A Spectrin alpha chain, brain spectrin; non-erythroid alpha chain alpha-II spectrin, fordrin alpha chain, sptan1, SPTA2_human, NESG, HR5563A; 2.30A {Homo sapiens}

Probab=99.10  E-value=5e-10  Score=78.51  Aligned_cols=70  Identities=16%  Similarity=0.307  Sum_probs=65.5

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHhhhc
Q psy11245          8 EHWNALLLNLRELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLEDKRAIIENSILSGRQYLNE   78 (87)
Q Consensus         8 ~~w~~L~~sLqELl~Wl~~kd~eL~~q~PigGDv~~Vq~Q~~~Hk~f~rEL~~k~~~V~~~L~s~r~fl~~   78 (87)
                      =.+.+|...+++|+.||..+...|+. .++|+|++.|+.++..|+.|+.||+++++.|.++...|+.++..
T Consensus        13 ~~~~~F~~~~~~l~~Wl~~~~~~l~~-~e~~~d~~~ve~ll~~H~~l~~ei~~~~~~~~~~~~~G~~Ll~~   82 (218)
T 3fb2_A           13 HDLQRFLSDFRDLMSWINGIRGLVSS-DELAKDVTGAEALLERHQEHRTEIDARAGTFQAFEQFGQQLLAH   82 (218)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHTC-CCCCSSSHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHT
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHcC-CCCCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhC
Confidence            35789999999999999999999986 49999999999999999999999999999999999999999943

>1u4q_A Spectrin alpha chain, brain; alpha spectrin, three repeats of spectrin, alpha-helical linker region, 3-helix coiled-coil, structural protein; 2.50A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 a.7.1.1

Probab=99.07  E-value=1.2e-09  Score=79.05  Aligned_cols=76  Identities=14%  Similarity=0.361  Sum_probs=67.6

Q ss_pred             hhhhhhHHHHHHHHHHHHHHHHHHhhhHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHhhhcC
Q psy11245          2 RLESNSEHWNALLLNLRELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLEDKRAIIENSILSGRQYLNEA   79 (87)
Q Consensus         2 rLE~~~~~w~~L~~sLqELl~Wl~~kd~eL~~q~PigGDv~~Vq~Q~~~Hk~f~rEL~~k~~~V~~~L~s~r~fl~~~   79 (87)
                      +||.+.. +.+|...+.++..||..+++.++. .|+|+|++.|+.++..|++|+.||..+++.|..++..|+.++..+
T Consensus       104 ~Le~~~~-l~~f~~~~~~~~~Wl~e~e~~~~~-~~~g~dl~~v~~ll~~h~~l~~el~~~~~~i~~l~~~g~~L~~~~  179 (322)
T 1u4q_A          104 KLNESHR-LHQFFRDMDDEESWIKEKKLLVSS-EDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQGVLDTGKKLSDDN  179 (322)
T ss_dssp             HHHHHHH-HHHHHHHHHHHHHHHHHHHHHHTC-CCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHH-HHHHHHHHHHHHHHHHHHHHhccC-CCcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            5666665 677888999999999999877765 689999999999999999999999999999999999999999543

>1u5p_A Spectrin alpha chain, brain; alpha spectrin, two repeats of spectrin, alpha-helical linker region, 3-helix coiled coil, structural protein; 2.00A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1

Probab=99.07  E-value=8.1e-10  Score=76.41  Aligned_cols=73  Identities=8%  Similarity=0.219  Sum_probs=67.6

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHhhhcCCC
Q psy11245          8 EHWNALLLNLRELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLEDKRAIIENSILSGRQYLNEASL   81 (87)
Q Consensus         8 ~~w~~L~~sLqELl~Wl~~kd~eL~~q~PigGDv~~Vq~Q~~~Hk~f~rEL~~k~~~V~~~L~s~r~fl~~~pl   81 (87)
                      ..+..|...+.++..||..++..|+.. ++|+|+.+|+.++..|+.|..++..+++.|.++...|..|+..++.
T Consensus         3 ~~~~~F~~~~~~l~~Wl~~~e~~l~~~-~~g~dl~~v~~ll~kh~~le~~i~~~~~~v~~l~~~~~~L~~~~~~   75 (216)
T 1u5p_A            3 NKQQNFNTGIKDFDFWLSEVEALLASE-DYGKDLASVNNLLKKHQLLEADISAHEDRLKDLNSQADSLMTSSAF   75 (216)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHTCC-CCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSS
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhcCc-ccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence            356789999999999999999999875 8999999999999999999999999999999999999999966553

>1s35_A Beta-I spectrin, spectrin beta chain, erythrocyte; two repeats of spectrin, alpha helical linker region, 3- helix coiled-coils, beta spectrin; 2.40A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1

Probab=99.07  E-value=1.1e-09  Score=75.68  Aligned_cols=68  Identities=10%  Similarity=0.264  Sum_probs=62.9

Q ss_pred             HHHHHHHHHHHHHHhhhHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHhhhcCC
Q psy11245         12 ALLLNLRELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLEDKRAIIENSILSGRQYLNEAS   80 (87)
Q Consensus        12 ~L~~sLqELl~Wl~~kd~eL~~q~PigGDv~~Vq~Q~~~Hk~f~rEL~~k~~~V~~~L~s~r~fl~~~p   80 (87)
                      +|...+++++.||..+.+.|+.. .+|||+++|+.++..|++|+.|+..+++.|.++...|+.++..++
T Consensus         4 ~F~~~~~~l~~Wl~~~~~~l~~~-~~~~dl~~v~~ll~~h~~~~~ei~~~~~~~~~~~~~g~~L~~~~~   71 (214)
T 1s35_A            4 AFLQDLDDFQAWLSITQKAVASE-DMPESLPEAEQLLQQHAGIKDEIDGHQDSYQRVKESGEKVIQGQT   71 (214)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHCC-CCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             hHHHHHHHHHHHHHHHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhcCC
Confidence            57889999999999999999865 579999999999999999999999999999999999999996543

>3edv_A Spectrin beta chain, brain 1; spectrin repeat, coiled coil, actin capping, actin-binding, alternative splicing, calmodulin-binding, cytoplasm; 1.95A {Homo sapiens}

Probab=99.07  E-value=1.3e-09  Score=79.19  Aligned_cols=75  Identities=13%  Similarity=0.248  Sum_probs=69.2

Q ss_pred             hhhhhhHHHHHHHHHHHHHHHHHHhhhHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHhhhc
Q psy11245          2 RLESNSEHWNALLLNLRELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLEDKRAIIENSILSGRQYLNE   78 (87)
Q Consensus         2 rLE~~~~~w~~L~~sLqELl~Wl~~kd~eL~~q~PigGDv~~Vq~Q~~~Hk~f~rEL~~k~~~V~~~L~s~r~fl~~   78 (87)
                      +||.+. .+.+|+..+++++.||..++..|+. .++++|++.++.++..|+.|+.|++.+++.|.++.+.|+.++..
T Consensus       214 ~L~~~~-~~~~F~~~~~~l~~Wl~~~~~~l~~-~~~~~d~~~~e~ll~~h~~l~~ei~~~~~~~~~l~~~g~~Ll~~  288 (323)
T 3edv_A          214 RLVDTG-DKFRFFSMVRDLMLWMEDVIRQIEA-QEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLAR  288 (323)
T ss_dssp             HHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHT-CCCCCSHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhC-CcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence            577766 4788999999999999999999986 68999999999999999999999999999999999999999943

>3lbx_A Spectrin alpha chain, erythrocyte; tetramer, complex, three-helix bundle, alpha helix repeat, helical linker, actin capping; 2.80A {Homo sapiens} PDB: 1owa_A

Probab=99.06  E-value=6.2e-10  Score=76.82  Aligned_cols=76  Identities=13%  Similarity=0.265  Sum_probs=66.9

Q ss_pred             hhhhhhHHHHHHHHHHHHHHHHHHhhhHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHhhhcCC
Q psy11245          2 RLESNSEHWNALLLNLRELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLEDKRAIIENSILSGRQYLNEAS   80 (87)
Q Consensus         2 rLE~~~~~w~~L~~sLqELl~Wl~~kd~eL~~q~PigGDv~~Vq~Q~~~Hk~f~rEL~~k~~~V~~~L~s~r~fl~~~p   80 (87)
                      +||.+.. -.+|...+.|+..||..|..-++. .++ ||+.+|+.+...|++|+.||.++++.|.++...|+.++..+|
T Consensus        51 ~Le~s~~-lq~F~~d~~el~~Wi~ek~~~a~~-~~~-~d~~~v~~ll~kH~afe~El~a~~~~~~~l~~~g~~Li~~~~  126 (161)
T 3lbx_A           51 KLEDSYH-LQVFKRDADDLGKWIMEKVNILTD-KSY-EDPTNIQGKYQKHQSLEAEVQTKSRLMSELEKTREERFTMGH  126 (161)
T ss_dssp             HHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHT-TSC-CSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTC
T ss_pred             HHHHHHH-HHHHHHHHHHHHHHHHHHhhhccC-CCc-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            6888884 458999999999999999876654 333 999999999999999999999999999999999999996555

>3edv_A Spectrin beta chain, brain 1; spectrin repeat, coiled coil, actin capping, actin-binding, alternative splicing, calmodulin-binding, cytoplasm; 1.95A {Homo sapiens}

Probab=99.05  E-value=1.1e-09  Score=79.55  Aligned_cols=76  Identities=12%  Similarity=0.189  Sum_probs=68.1

Q ss_pred             hhhhhhHHHHHHHHHHHHHHHHHHhhhHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHhhhcCC
Q psy11245          2 RLESNSEHWNALLLNLRELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLEDKRAIIENSILSGRQYLNEAS   80 (87)
Q Consensus         2 rLE~~~~~w~~L~~sLqELl~Wl~~kd~eL~~q~PigGDv~~Vq~Q~~~Hk~f~rEL~~k~~~V~~~L~s~r~fl~~~p   80 (87)
                      +|+.+. ...+|...+.+++.||..|+..|+  .|+|+|+++|+.++..|++|+++|..+++.|.++...|..++..+|
T Consensus       108 ~L~~a~-~~~~f~~~~~e~~~Wl~~k~~~l~--~~~~~d~~~v~~l~~~h~~~~~~l~~~~~~v~~l~~~a~~L~~~~~  183 (323)
T 3edv_A          108 ILAASY-ELHKFYHDAKEIFGRIQDKHKKLP--EELGRDQNTVETLQRMHTTFEHDIQALGTQVRQLQEDAARLQAAYA  183 (323)
T ss_dssp             HHHHHH-HHHHHHHHHHHHHHHHHHHHHTCC--CCCCSSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHCC
T ss_pred             HHHHHH-HHHHHHHHHHHHHHHHHHHHhhcc--cccccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence            355444 677888999999999999999985  7999999999999999999999999999999999999999997665

>1s35_A Beta-I spectrin, spectrin beta chain, erythrocyte; two repeats of spectrin, alpha helical linker region, 3- helix coiled-coils, beta spectrin; 2.40A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1

Probab=99.05  E-value=2.5e-09  Score=73.86  Aligned_cols=77  Identities=9%  Similarity=0.127  Sum_probs=68.7

Q ss_pred             hhhhhhHHHHHHHHHHHHHHHHHHhhhHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHhh-hcCC
Q psy11245          2 RLESNSEHWNALLLNLRELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLEDKRAIIENSILSGRQYL-NEAS   80 (87)
Q Consensus         2 rLE~~~~~w~~L~~sLqELl~Wl~~kd~eL~~q~PigGDv~~Vq~Q~~~Hk~f~rEL~~k~~~V~~~L~s~r~fl-~~~p   80 (87)
                      +|+... .+..|.....++..||..++..|+. .++|+|+++|+.++..|++|+.+|.+++..|.++...|+.++ ..||
T Consensus       102 ~L~~~l-~l~~F~~~~~~~~~Wl~~~E~~l~~-~~~g~~~~~v~~llkkh~~f~~~l~~~~~~i~~l~~~a~~L~~~~h~  179 (214)
T 1s35_A          102 TLAQCL-GFQEFQKDAKQAEAILSNQEYTLAH-LEPPDSLEAAEAGIRKFEDFLGSMENNRDKVLSPVDSGNKLVAEGNL  179 (214)
T ss_dssp             HHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHC-CCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCT
T ss_pred             HHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhc-ccCCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCC
Confidence            466554 4888999999999999999988874 689999999999999999999999999999999999999999 4555

>3edu_A Beta-I spectrin, spectrin beta chain, erythrocyte; ankyrin, ankyrin-binding domain, actin capping, AC binding, cytoskeleton, disease mutation; 2.10A {Homo sapiens} PDB: 3f57_A

Probab=99.01  E-value=2.5e-09  Score=74.95  Aligned_cols=69  Identities=19%  Similarity=0.268  Sum_probs=63.2

Q ss_pred             HHHHHHHHHHHHHHHhhhHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhH-hHHHHHHHHHHHHHhhh-cCC
Q psy11245         11 NALLLNLRELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLED-KRAIIENSILSGRQYLN-EAS   80 (87)
Q Consensus        11 ~~L~~sLqELl~Wl~~kd~eL~~q~PigGDv~~Vq~Q~~~Hk~f~rEL~~-k~~~V~~~L~s~r~fl~-~~p   80 (87)
                      -+|...+.++..||..|+..|+. .++|+|++.|+.+...|++|++||.+ +++.|.++...|..++. .||
T Consensus         4 ~~f~~~~~~l~~Wl~~ke~~l~~-~~~g~dl~~v~~l~~k~~~f~~el~~~~~~~v~~v~~~~~~L~~~~~~   74 (218)
T 3edu_A            4 FQLKRETDDLEQWISEKELVASS-PEMGQDFDHVTLLRDKFRDFARETGAIGQERVDNVNAFIERLIDAGHS   74 (218)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTC-CCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcc-cccCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHcCCC
Confidence            36788899999999999999985 69999999999999999999999998 89999999999999994 444

>1u4q_A Spectrin alpha chain, brain; alpha spectrin, three repeats of spectrin, alpha-helical linker region, 3-helix coiled-coil, structural protein; 2.50A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 a.7.1.1

Probab=98.99  E-value=4e-09  Score=76.27  Aligned_cols=77  Identities=18%  Similarity=0.359  Sum_probs=68.6

Q ss_pred             hhhhhhHHHHHHHHHHHHHHHHHHhhhHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHhhh-cCC
Q psy11245          2 RLESNSEHWNALLLNLRELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLEDKRAIIENSILSGRQYLN-EAS   80 (87)
Q Consensus         2 rLE~~~~~w~~L~~sLqELl~Wl~~kd~eL~~q~PigGDv~~Vq~Q~~~Hk~f~rEL~~k~~~V~~~L~s~r~fl~-~~p   80 (87)
                      +|+.+.. +..|.....++..||..+++.|+ ..|+|+|+++++.++..|++|+++++.+++.|..+...|+.++. .+|
T Consensus       210 ~L~~~~~-~~qf~~~~~~~~~Wl~~~e~~l~-~~~~g~~~~~~~~ll~~h~~~~~el~~~~~~v~~l~~~~~~L~~~~~~  287 (322)
T 1u4q_A          210 RLEESLE-YQQFVANVEEEEAWINEKMTLVA-SEDYGDTLAAIQGLLKKHEAFETDFTVHKDRVNDVCANGEDLIKKNNH  287 (322)
T ss_dssp             HHHHHHH-HHHHHHHHHHHHHHHHHHHHHHT-CCCCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCT
T ss_pred             HHHHHHH-HHHHHHHHHHHHHHHHHHHHHhc-CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence            5665444 78899999999999999999886 46999999999999999999999999999999999999999994 444

>3edu_A Beta-I spectrin, spectrin beta chain, erythrocyte; ankyrin, ankyrin-binding domain, actin capping, AC binding, cytoskeleton, disease mutation; 2.10A {Homo sapiens} PDB: 3f57_A

Probab=98.96  E-value=7.4e-10  Score=77.67  Aligned_cols=76  Identities=16%  Similarity=0.131  Sum_probs=56.1

Q ss_pred             hhhhhhHHHHHHHHHHHHHHHHHHhhhHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHhhhcCC
Q psy11245          2 RLESNSEHWNALLLNLRELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLEDKRAIIENSILSGRQYLNEAS   80 (87)
Q Consensus         2 rLE~~~~~w~~L~~sLqELl~Wl~~kd~eL~~q~PigGDv~~Vq~Q~~~Hk~f~rEL~~k~~~V~~~L~s~r~fl~~~p   80 (87)
                      +|+.+ ....+|+..+.+++.||..|+..|+  .|+|+|+++|+.++..|++|.++|...++.|.+....|..++..+|
T Consensus       103 ~L~~a-~~~~~F~~~~~e~~~Wl~ek~~~l~--~~~g~dl~~v~~l~~~h~~~e~dL~~~~~~v~~l~~~a~~L~~~~~  178 (218)
T 3edu_A          103 LLAAS-YDLHRYFYTGAEILGLIDEKHRELP--EDVGLDASTAESFHRVHTAFERELHLLGVQVQQFQDVATRLQTAYA  178 (218)
T ss_dssp             HHHHH-HHHHHHHHHHHHHHHHHHHHHHCCC---------------CCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             HHHHH-HHHHHHHHHHHHHHHHHHHHHhhCC--CccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Confidence            45555 4678899999999999999999995  8899999999999999999999999999999999999999986655

>3kbt_A Beta-I spectrin, spectrin beta chain, erythrocyte; complex, spectrin, spectrin repeat, three helix bundle, ANKY binding, disease mutation, structural protein, ZU5 sandwich; 2.75A {Homo sapiens} PDB: 3kbu_A

Probab=98.95  E-value=7.6e-09  Score=75.09  Aligned_cols=76  Identities=20%  Similarity=0.289  Sum_probs=67.0

Q ss_pred             hhhhhhHHHHHHHHHHHHHHHHHHhhhHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhH-hHHHHHHHHHHHHHhhhcC
Q psy11245          2 RLESNSEHWNALLLNLRELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLED-KRAIIENSILSGRQYLNEA   79 (87)
Q Consensus         2 rLE~~~~~w~~L~~sLqELl~Wl~~kd~eL~~q~PigGDv~~Vq~Q~~~Hk~f~rEL~~-k~~~V~~~L~s~r~fl~~~   79 (87)
                      +||... .+..|...+.++..||..++..++ ..++|+|++.|+.+...|+.|++++.. +.+.|.++...|..++..+
T Consensus       105 ~Le~~l-~l~~f~~~~~~l~~Wl~~~e~~l~-~~~~g~d~~~v~~l~~~~~~f~~el~~~~~~~v~~l~~~~~~L~~~~  181 (326)
T 3kbt_A          105 KLENMY-HLFQLKRETDDLEQWISEKELVAS-SPEMGQDFDHVTLLRDKFRDFARETGAIGQERVDNVNAFIERLIDAG  181 (326)
T ss_dssp             HHHHHH-HHHHHHHHHHHHHHHHHHHHHHHH-CCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHH-HHHHHHHHHHHHHHHHHHHHHHHc-cccCCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHcC
Confidence            456554 567788888999999999999887 478999999999999999999999998 8999999999999999443

>3kbt_A Beta-I spectrin, spectrin beta chain, erythrocyte; complex, spectrin, spectrin repeat, three helix bundle, ANKY binding, disease mutation, structural protein, ZU5 sandwich; 2.75A {Homo sapiens} PDB: 3kbu_A

Probab=98.92  E-value=5.6e-09  Score=75.78  Aligned_cols=72  Identities=17%  Similarity=0.148  Sum_probs=64.8

Q ss_pred             hhHHHHHHHHHHHHHHHHHHhhhHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHhhhc
Q psy11245          6 NSEHWNALLLNLRELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLEDKRAIIENSILSGRQYLNE   78 (87)
Q Consensus         6 ~~~~w~~L~~sLqELl~Wl~~kd~eL~~q~PigGDv~~Vq~Q~~~Hk~f~rEL~~k~~~V~~~L~s~r~fl~~   78 (87)
                      ++..-.+|...+.|+.+||..++..|+. .++|+|+++|+.++..|++|++||..+++.|..+...|+.++..
T Consensus         2 ~~~~~qqf~~~~~el~~Wl~e~~~~l~~-~~~g~d~~~~~~ll~kh~~~~~el~~~~~~v~~l~~~~~~L~~~   73 (326)
T 3kbt_A            2 NANEAQQYYLDADEAEAWIGEQELYVIS-DEIPKDEEGAIVMLKRHLRQQRAVEDYGRNIKQLASRAQGLLSA   73 (326)
T ss_dssp             ---CHHHHHHHHHHHHHHHHHHHHTTSC-CCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHhcC-CccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence            4455678999999999999999999876 68999999999999999999999999999999999999999954

>1hci_A Alpha-actinin 2; triple-helix coiled coil, contractIle protein, muscle, Z- LINE, actin-binding protein; 2.8A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1 a.7.1.1 a.7.1.1

Probab=98.83  E-value=2e-08  Score=76.55  Aligned_cols=70  Identities=11%  Similarity=0.152  Sum_probs=64.8

Q ss_pred             HHHHHHHHHHHHHHHHhhhHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHhhhcC
Q psy11245         10 WNALLLNLRELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLEDKRAIIENSILSGRQYLNEA   79 (87)
Q Consensus        10 w~~L~~sLqELl~Wl~~kd~eL~~q~PigGDv~~Vq~Q~~~Hk~f~rEL~~k~~~V~~~L~s~r~fl~~~   79 (87)
                      +.+|.....++.+||..+++.|+...+||+|+++|+.++..|++|+++|..+++.|.++...|+.++..+
T Consensus       133 ~~~f~~~~~~~~~Wl~e~e~~l~~~~~~g~dl~~v~~ll~kh~~~~~~l~~~~~~v~~l~~~~~~L~~~~  202 (476)
T 1hci_A          133 AEKFRQKASTHETWAYGKEQILLQKDYESASLTEVRALLRKHEAFESDLAAHQDRVEQIAAIAQELNELD  202 (476)
T ss_dssp             HHHHHHHHHHHHHHHTTHHHHHHCCGGGSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCCccCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhCc
Confidence            5677778889999999999999987777999999999999999999999999999999999999999543

>3lbx_B Beta-I spectrin, spectrin beta chain, erythrocyte; tetramer, complex, three-helix bundle, alpha helix repeat, helical linker, actin capping; 2.80A {Homo sapiens}

Probab=98.75  E-value=1.9e-08  Score=69.47  Aligned_cols=71  Identities=11%  Similarity=0.172  Sum_probs=63.8

Q ss_pred             hHHHHHHHHHHHHHHHHHHhhhHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHhhhc
Q psy11245          7 SEHWNALLLNLRELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLEDKRAIIENSILSGRQYLNE   78 (87)
Q Consensus         7 ~~~w~~L~~sLqELl~Wl~~kd~eL~~q~PigGDv~~Vq~Q~~~Hk~f~rEL~~k~~~V~~~L~s~r~fl~~   78 (87)
                      +..+-+|+..+++++.|+..+...|+.. .+++||+.|+.++..|+.|+.||.++++.|..+...|+.++..
T Consensus         3 ~~dl~~F~~~~~dl~~Wl~~~~~~l~~~-e~~~d~~~~e~ll~~H~~~~~ei~~~~~~~~~l~~~G~~L~~~   73 (185)
T 3lbx_B            3 TADKFRFFSMARDLLSWMESIIRQIETQ-ERPRDVSSVELLMKYHQGINAEIETRSKNFSACLELGESLLQR   73 (185)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHS-CC--CCSSSCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhCC-cCCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhc
Confidence            4567899999999999999999999975 5699999999999999999999999999999999999999943

>3fb2_A Spectrin alpha chain, brain spectrin; non-erythroid alpha chain alpha-II spectrin, fordrin alpha chain, sptan1, SPTA2_human, NESG, HR5563A; 2.30A {Homo sapiens}

Probab=98.70  E-value=3e-08  Score=69.40  Aligned_cols=75  Identities=12%  Similarity=0.208  Sum_probs=47.7

Q ss_pred             hhhhhhHHHHHHHHHHHHHHHHHHhhhHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHhhhc
Q psy11245          2 RLESNSEHWNALLLNLRELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLEDKRAIIENSILSGRQYLNE   78 (87)
Q Consensus         2 rLE~~~~~w~~L~~sLqELl~Wl~~kd~eL~~q~PigGDv~~Vq~Q~~~Hk~f~rEL~~k~~~V~~~L~s~r~fl~~   78 (87)
                      +|+... .+..|.....++..||..++..|+.. ++|+|++.|+.++..|++|+++|..++..|..+...|..++..
T Consensus       114 ~L~q~l-~l~~F~~d~~~~~~WL~~~e~~L~~~-~~g~s~~~ve~ll~~h~~f~~~l~~~~~~v~~l~~~~~~L~~~  188 (218)
T 3fb2_A          114 MLDQCL-ELQLFHRDCEQAENWMAAREAFLNTE-DKGDSLDSVEALIKKHEDFDKAINVQEEKIAALQAFADQLIAA  188 (218)
T ss_dssp             HHHHHH-HHHHHHHHHHHHHHHHHHHHHCC--------------------CHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHH-HHHHHHHHHHHHHHHHHHHHHhhcCC-CCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHc
Confidence            344444 35667777889999999999999885 8999999999999999999999999999999999999999943

>1hci_A Alpha-actinin 2; triple-helix coiled coil, contractIle protein, muscle, Z- LINE, actin-binding protein; 2.8A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1 a.7.1.1 a.7.1.1

Probab=98.63  E-value=3.2e-07  Score=69.81  Aligned_cols=79  Identities=13%  Similarity=0.156  Sum_probs=65.6

Q ss_pred             hhhhhhHHHH-------HHHHHHHHHHHHHHhhhHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhHhHHHHHHH---HHH
Q psy11245          2 RLESNSEHWN-------ALLLNLRELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLEDKRAIIENS---ILS   71 (87)
Q Consensus         2 rLE~~~~~w~-------~L~~sLqELl~Wl~~kd~eL~~q~PigGDv~~Vq~Q~~~Hk~f~rEL~~k~~~V~~~---L~s   71 (87)
                      +|+.+...+.       .|.....++.+||..+++.|.... +|+|++.|+.+...|++|+++|.++++.|.++   ...
T Consensus       233 ~L~~~~~~~~~~e~l~~~f~~~a~~~~~Wl~~~~~~l~~~~-~~~dl~~v~~ll~~h~~~~~~l~~~~~~~~~~~~l~~~  311 (476)
T 1hci_A          233 ALERMEKLLETIDQLHLEFAKRAAPFNNWMEGAMEDLQDMF-IVHSIEEIQSLITAHEQFKATLPEADGERQSIMAIQNE  311 (476)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCC-CCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4555555544       566677889999999999999876 79999999999999999999999999998877   688


Q ss_pred             HHHhhhcCCC
Q psy11245         72 GRQYLNEASL   81 (87)
Q Consensus        72 ~r~fl~~~pl   81 (87)
                      |+.++.....
T Consensus       312 ~~~l~~~~~~  321 (476)
T 1hci_A          312 VEKVIQSYNI  321 (476)
T ss_dssp             HHHHHHTTTC
T ss_pred             HHHHHHhcCC
Confidence            8999965443

>2iak_A Bullous pemphigoid antigen 1, isoform 5; triple helical bundle, spectrin repeat, cell adhesion; 3.00A {Mus musculus}

Probab=98.62  E-value=6.9e-08  Score=68.44  Aligned_cols=73  Identities=19%  Similarity=0.349  Sum_probs=60.8

Q ss_pred             hhhhhHHHHHHHHHHHHHHHHHHhhhHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHhh
Q psy11245          3 LESNSEHWNALLLNLRELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLEDKRAIIENSILSGRQYL   76 (87)
Q Consensus         3 LE~~~~~w~~L~~sLqELl~Wl~~kd~eL~~q~PigGDv~~Vq~Q~~~Hk~f~rEL~~k~~~V~~~L~s~r~fl   76 (87)
                      |+....+-.+++..++++.+||..+++.|+.. +.|+|+++|+.++..|++|.+++..+++.|..+...+..|.
T Consensus        15 l~~~L~ea~~~~~~~~~l~~Wl~e~e~~l~s~-d~g~Dl~~v~~ll~kh~~~e~ei~~~~~~v~~~~~~~~~~~   87 (224)
T 2iak_A           15 LDQNLTEEEVNMKFVQDLLNWVDEMQVQLDRT-EWGSDLPSVESHLENHKNVHRAIEEFESSLKEAKISEIQMT   87 (224)
T ss_dssp             SSSCCCHHHHHC-CHHHHHHHHHHHHHHHHTC-CCCSSHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHGGGCC
T ss_pred             HHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcc-ccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            44444445566677999999999999999874 68999999999999999999999999999998877766664

>1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1

Probab=98.50  E-value=7.9e-07  Score=72.80  Aligned_cols=71  Identities=13%  Similarity=0.113  Sum_probs=63.7

Q ss_pred             HHHHHHHHHHHHHHHHHhhhHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHhhhcC
Q psy11245          9 HWNALLLNLRELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLEDKRAIIENSILSGRQYLNEA   79 (87)
Q Consensus         9 ~w~~L~~sLqELl~Wl~~kd~eL~~q~PigGDv~~Vq~Q~~~Hk~f~rEL~~k~~~V~~~L~s~r~fl~~~   79 (87)
                      ...+|.....++..||..+++.|+...+..+|+.+|+.++..|++|+.+|..+++.|..+...|+.++..+
T Consensus       371 l~~~F~~~~~~~~~Wl~~~e~~l~~~~~g~~dl~~v~~ll~kh~~f~~el~~~~~~v~~l~~~~~~L~~~~  441 (863)
T 1sjj_A          371 LAEKFRQKASIHESWTDGKEAMLQQKDYETATLSEIKALLKKHEAFESDLAAHQDRVEQIAAIAQELNELD  441 (863)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHSCTTTSSCHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence            45677778899999999999999996666669999999999999999999999999999999999999543

>2iak_A Bullous pemphigoid antigen 1, isoform 5; triple helical bundle, spectrin repeat, cell adhesion; 3.00A {Mus musculus}

Probab=98.47  E-value=2.1e-07  Score=65.88  Aligned_cols=71  Identities=14%  Similarity=0.149  Sum_probs=48.4

Q ss_pred             HHHHHHHHHHHHHHHHHhhhHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHhh-hcCC
Q psy11245          9 HWNALLLNLRELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLEDKRAIIENSILSGRQYL-NEAS   80 (87)
Q Consensus         9 ~w~~L~~sLqELl~Wl~~kd~eL~~q~PigGDv~~Vq~Q~~~Hk~f~rEL~~k~~~V~~~L~s~r~fl-~~~p   80 (87)
                      .-.+|.....+++.||..|++.++ ...+|.|+..|+.....|.+|+.||..+++.|.++...|+.++ ..||
T Consensus       121 ~l~~F~~~~~~~~~Wi~eke~~~~-s~d~g~~l~~v~~L~~kh~~l~~el~~~~~~v~~v~~~g~~L~~~~h~  192 (224)
T 2iak_A          121 TLHNFVTRATNELIWLNEKEESEV-AYDWSERNSSVARKKSYHAELMRELEQKEESIKAVQEIAEQLLLENHP  192 (224)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHC-CC---------------CSSHHHHHHHHHHHHHHHHHHHHHHHHTTCT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHh-ccccCCCchhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCCC
Confidence            445666777889999999999876 4788999999999999999999999999999999999999999 4554

>2spc_A Spectrin; cytoskeleton; 1.80A {Drosophila melanogaster} SCOP: a.7.1.1

Probab=98.45  E-value=2e-07  Score=59.09  Aligned_cols=68  Identities=10%  Similarity=0.139  Sum_probs=62.7

Q ss_pred             HHHHHHHHHHHHHHHHHhhhHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHhhh
Q psy11245          9 HWNALLLNLRELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLEDKRAIIENSILSGRQYLN   77 (87)
Q Consensus         9 ~w~~L~~sLqELl~Wl~~kd~eL~~q~PigGDv~~Vq~Q~~~Hk~f~rEL~~k~~~V~~~L~s~r~fl~   77 (87)
                      .+-.|.....++..||..++.-|+ ...+|+|+..|+..+..|++|..++.+....|..+...|+.++.
T Consensus         4 ~lq~F~~d~~~~e~Wl~~~e~~l~-~~d~g~~l~~v~~Llkkh~~fe~~~~~~~~~i~~l~~~a~~L~~   71 (107)
T 2spc_A            4 DLQLYMRDCELAESWMSAREAFLN-ADDDANAGGNVEALIKKHEDFDKAINGHEQKIAALQTVADQLIA   71 (107)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHCCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHh-CcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            567888899999999999998777 45779999999999999999999999999999999999999994

>3lbx_B Beta-I spectrin, spectrin beta chain, erythrocyte; tetramer, complex, three-helix bundle, alpha helix repeat, helical linker, actin capping; 2.80A {Homo sapiens}

Probab=98.35  E-value=3e-06  Score=58.34  Aligned_cols=58  Identities=14%  Similarity=0.250  Sum_probs=51.4

Q ss_pred             HHHHHHHHHHHHHHHHhhhHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhHhHHHHHHH
Q psy11245         10 WNALLLNLRELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLEDKRAIIENS   68 (87)
Q Consensus        10 w~~L~~sLqELl~Wl~~kd~eL~~q~PigGDv~~Vq~Q~~~Hk~f~rEL~~k~~~V~~~   68 (87)
                      .-.|.....++..||..++..|+. .|+|+|++.|+.++..|++|..+|.+.+..|...
T Consensus       112 l~~F~~d~~~~~~Wl~~~e~~L~~-~~~g~sl~~ve~LlkkH~~fe~~l~~~~e~i~~L  169 (185)
T 3lbx_B          112 VCQFSRDASVAEAWLIAQEPYLAS-GDFGHTVDSVEKLIKRHEAFEKSTASWAERFAAL  169 (185)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHC-CCCCSSHHHHHHHHHHHHHHHHHHHHTHHHHHHH
T ss_pred             HHHHHHhHHHHHHHHHHhHhhhcc-CCCCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence            445667778899999999999976 6999999999999999999999999999988764

>3pdy_A Plectin; cytoskeleton, plakin, intermediate filament, spectrin repeat structural protein, crosslinking; 2.22A {Homo sapiens}

Probab=98.33  E-value=2.9e-06  Score=59.87  Aligned_cols=66  Identities=17%  Similarity=0.169  Sum_probs=57.8

Q ss_pred             HHHHHHHHHHHHhhhHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHhh-hcCC
Q psy11245         14 LLNLRELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLEDKRAIIENSILSGRQYL-NEAS   80 (87)
Q Consensus        14 ~~sLqELl~Wl~~kd~eL~~q~PigGDv~~Vq~Q~~~Hk~f~rEL~~k~~~V~~~L~s~r~fl-~~~p   80 (87)
                      .....+++.||..|+..+.. .-+|.|+..|+.....|.+|++||..+++.|.++...|..+| ..||
T Consensus       111 ~~~~~~~~~Wl~eke~~~~s-~d~g~~~~~v~~l~~k~~~f~~el~~~~~~v~~l~~~~~~Ll~~~h~  177 (210)
T 3pdy_A          111 VAAATKELMWLNEKEEEEVG-FDWSDRNTNMTAKKESYSALMRELELKEKKIKELQNAGDRLLREDHP  177 (210)
T ss_dssp             HHHHHHHHHHHHHHHHHHHH-SCCSTTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCT
T ss_pred             HHHHHHHHHHHHHHHHHHHc-cccCCCchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCC
Confidence            44445778999999999986 678888888999999999999999999999999999999999 5665

>3pdy_A Plectin; cytoskeleton, plakin, intermediate filament, spectrin repeat structural protein, crosslinking; 2.22A {Homo sapiens}

Probab=98.24  E-value=4.2e-06  Score=59.02  Aligned_cols=62  Identities=26%  Similarity=0.365  Sum_probs=56.3

Q ss_pred             HHHHHHHHHHHHhhhHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHhh
Q psy11245         14 LLNLRELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLEDKRAIIENSILSGRQYL   76 (87)
Q Consensus        14 ~~sLqELl~Wl~~kd~eL~~q~PigGDv~~Vq~Q~~~Hk~f~rEL~~k~~~V~~~L~s~r~fl   76 (87)
                      ...++++..||..|...|+. .+.|-|+++|+.++..|++|..+|...++.|.+.-..|..|.
T Consensus        11 ~r~~~dl~~Wl~e~~~~l~s-~d~G~Dl~~ve~llkkH~~le~ei~~~~~~v~~l~~~a~~l~   72 (210)
T 3pdy_A           11 LRYLQDLLAWVEENQHRVDG-AEWGVDLPSVEAQLGSHRGLHQSIEEFRAKIERARSDEGQLS   72 (210)
T ss_dssp             HHHHHHHHHHHHHHHHHHHH-CCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGSC
T ss_pred             hhhHHHHHHHHHHHHHHhcc-cccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence            56789999999999888876 688999999999999999999999999999999888887764

>1quu_A Human skeletal muscle alpha-actinin 2; triple-helix coiled coil, contractIle protein; 2.50A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1

Probab=98.21  E-value=1e-05  Score=57.70  Aligned_cols=68  Identities=13%  Similarity=0.155  Sum_probs=53.7

Q ss_pred             HHHHHHHHHHHHHHhhhHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhHhH---HHHHHHHHHHHHhhhcCC
Q psy11245         12 ALLLNLRELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLEDKR---AIIENSILSGRQYLNEAS   80 (87)
Q Consensus        12 ~L~~sLqELl~Wl~~kd~eL~~q~PigGDv~~Vq~Q~~~Hk~f~rEL~~k~---~~V~~~L~s~r~fl~~~p   80 (87)
                      .|.....++..||..+++.|.... +|+|++.|+.+...|++|+++|.+.+   +.|......+..++...+
T Consensus       133 qF~~~a~~~~~Wl~~~e~~l~~~~-~~~d~e~v~~ll~~h~~~~~~l~~~~~~~~~i~~l~~~~~~l~~~~~  203 (250)
T 1quu_A          133 EFAKRAAPFNNWMEGAMEDLQDMF-IVHSIEEIQSLITAHEQFKATLPEADGERQSIMAIQNEVEKVIQSYN  203 (250)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTTCCC-CCCSTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred             HHHHHhHHHHHHHHHHHHHhcccc-ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            455556688999999999998875 89999999999999999996666665   555555677788875443

>3pe0_A Plectin; cytoskeleton, plakin, spectrin repeat, SH3, structural prote intermediate filament, crosslinking; 2.95A {Homo sapiens}

Probab=98.10  E-value=1.2e-05  Score=60.03  Aligned_cols=78  Identities=15%  Similarity=0.147  Sum_probs=58.3

Q ss_pred             ChhhhhhHHHHHHHHHHHHHHHHHHhhhHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHhhh-cC
Q psy11245          1 NRLESNSEHWNALLLNLRELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLEDKRAIIENSILSGRQYLN-EA   79 (87)
Q Consensus         1 ~rLE~~~~~w~~L~~sLqELl~Wl~~kd~eL~~q~PigGDv~~Vq~Q~~~Hk~f~rEL~~k~~~V~~~L~s~r~fl~-~~   79 (87)
                      +||+....-+ +|.-...+.+.||.-|++... ....|+....|+.....|++|++||.+|++.|..+.+.|+.++. .|
T Consensus         2 ~rL~~l~~L~-qF~~d~~~e~~Wi~Eke~~~~-~~D~~~~~~~l~~~~~kh~~le~El~a~e~~v~~v~~~g~~L~~~~h   79 (283)
T 3pe0_A            2 SHMRSLESLH-SFVAAATKELMWLNEKEEEEV-GFDWSDRNTNMTAKKESYSALMRELELKEKKIKELQNAGDRLLREDH   79 (283)
T ss_dssp             -----CHHHH-HHHHHHHHHHHHHHHHHHHHH-TCCCSTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCC
T ss_pred             hhHHHHHHHH-HHHHHHHHHHHHHHHHhHHhh-cCCchhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCC
Confidence            4677777777 677778999999999999843 23333332238888889999999999999999999999999994 55


Q ss_pred             C
Q psy11245         80 S   80 (87)
Q Consensus        80 p   80 (87)
                      |
T Consensus        80 p   80 (283)
T 3pe0_A           80 P   80 (283)
T ss_dssp             T
T ss_pred             C
Confidence            5

>3r6n_A Desmoplakin; spectrin repeat, SH3 domain, cell adhesion, desmosome; 2.95A {Homo sapiens}

Probab=97.66  E-value=0.0001  Score=58.95  Aligned_cols=68  Identities=12%  Similarity=0.076  Sum_probs=53.1

Q ss_pred             HHHHHHHHHHHHHHhhhHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHhh-hcCC
Q psy11245         12 ALLLNLRELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLEDKRAIIENSILSGRQYL-NEAS   80 (87)
Q Consensus        12 ~L~~sLqELl~Wl~~kd~eL~~q~PigGDv~~Vq~Q~~~Hk~f~rEL~~k~~~V~~~L~s~r~fl-~~~p   80 (87)
                      +|.....+.+.||..|++.+.. .-.|-++..|+.....|++|+.||.+|++.|..+.+.|+.++ ..||
T Consensus        97 qFl~d~~ee~~Wi~EKe~~~~s-~d~gd~l~dv~~l~~khq~l~~EL~~~e~~i~~v~~~G~~Li~~~Hp  165 (450)
T 3r6n_A           97 NIIQATSREIMWINDCEEEELL-YDWSDKNTNIAQKQEAFSIRMSQLEVKEKELNKLKQESDQLVLNQHP  165 (450)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHS-CCCSTTCCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCT
T ss_pred             HHHHHHHHHHHHHHHHHHHHhc-cccCcChhhHHHHHHHHHHHHHHHHHchHHHHHHHHHHHHHHHcCCC
Confidence            5666777889999999987764 344433333333457899999999999999999999999999 5666

>1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1

Probab=97.61  E-value=7.9e-05  Score=61.00  Aligned_cols=58  Identities=16%  Similarity=0.174  Sum_probs=52.4

Q ss_pred             HHHHHHHhhhHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHhhh
Q psy11245         19 ELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLEDKRAIIENSILSGRQYLN   77 (87)
Q Consensus        19 ELl~Wl~~kd~eL~~q~PigGDv~~Vq~Q~~~Hk~f~rEL~~k~~~V~~~L~s~r~fl~   77 (87)
                      ++..|+..+++.|+.. ++|+|++.|+.++..|+.|+.+|.++++-|.++...++++..
T Consensus       496 ~~~~Wl~~~e~~l~~~-~~g~dl~~ve~ll~kh~~~~~~l~~~~~~~~~~~~l~~~l~~  553 (863)
T 1sjj_A          496 PFNNWMEGAMEDLQDT-FIVHTIEEIQGLTTAHEQFKATLPDADKERQAILGIHNEVSK  553 (863)
T ss_dssp             TTHHHHHHHHHHHHCC-CCCSSSGGGHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhcch-HhhccHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence            4889999999999874 689999999999999999999999999999988888887764

>3r6n_A Desmoplakin; spectrin repeat, SH3 domain, cell adhesion, desmosome; 2.95A {Homo sapiens}

Probab=96.43  E-value=0.024  Score=45.18  Aligned_cols=69  Identities=6%  Similarity=0.080  Sum_probs=60.3

Q ss_pred             HHHHHHHHHHHHHHhhhHHHhhc--CCCCCCHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHhhhcCC
Q psy11245         12 ALLLNLRELSDWVFRKDAELSRL--GPIGGDINVLQKQEDDHRAFRRQLEDKRAIIENSILSGRQYLNEAS   80 (87)
Q Consensus        12 ~L~~sLqELl~Wl~~kd~eL~~q--~PigGDv~~Vq~Q~~~Hk~f~rEL~~k~~~V~~~L~s~r~fl~~~p   80 (87)
                      +|..-..|.-.||..+++.|...  .-.|.|+.+|+..+..|.+|.++|..-+..|.+.-..|+.++..+|
T Consensus       203 QF~~Da~EaesWL~eke~~l~s~y~~D~g~d~~~~e~LLkkh~~le~~l~~~~~~I~~L~~qA~~l~~l~~  273 (450)
T 3r6n_A          203 QFFEEAQSTEAYLKGLQDSIRKKYPCDKNMPLQHLLEQIKELEKEREKILEYKRQVQNLVNKSKKIVQLKP  273 (450)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHSCCCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCGG
T ss_pred             hHHHHHHHHHHHHHHHHHHhcccccCcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence            34445678999999999999876  2469999999999999999999999999999999999999985444

>2odv_A Plectin 1, HD1; plakin domain, spectrin repeat, cytoskeleton, hemidesmosomes epidermolysis bullosa, structural protein; 2.05A {Homo sapiens} PDB: 2odu_A

Probab=95.87  E-value=0.12  Score=37.94  Aligned_cols=54  Identities=9%  Similarity=0.103  Sum_probs=46.8

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHhhhHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhh
Q psy11245          5 SNSEHWNALLLNLRELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLE   59 (87)
Q Consensus         5 ~~~~~w~~L~~sLqELl~Wl~~kd~eL~~q~PigGDv~~Vq~Q~~~Hk~f~rEL~   59 (87)
                      .+-.-|+.|-.--.+|+.|+..+-..|.... .+|+++.|+++....+.|++..+
T Consensus         8 e~e~~~~eYe~~as~Ll~WI~~~~~~l~~r~-f~~sl~~vq~~l~~f~~fr~~ek   61 (235)
T 2odv_A            8 ELQLRWQEYRELVLLLLQWMRHHTAAFEERR-FPSSFEEIEILWSQFLKFKEMEL   61 (235)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--CCSSHHHHHHHHHHHHHHHHHTH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHhccC
Confidence            3445688999999999999999999998775 69999999999999999998665

>3pe0_A Plectin; cytoskeleton, plakin, spectrin repeat, SH3, structural prote intermediate filament, crosslinking; 2.95A {Homo sapiens}

Probab=95.30  E-value=0.044  Score=40.68  Aligned_cols=71  Identities=10%  Similarity=0.123  Sum_probs=56.5

Q ss_pred             HHHHHHHHHHHHHHHHhhhHHH--hhcCCCCCCHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHhhhcCC
Q psy11245         10 WNALLLNLRELSDWVFRKDAEL--SRLGPIGGDINVLQKQEDDHRAFRRQLEDKRAIIENSILSGRQYLNEAS   80 (87)
Q Consensus        10 w~~L~~sLqELl~Wl~~kd~eL--~~q~PigGDv~~Vq~Q~~~Hk~f~rEL~~k~~~V~~~L~s~r~fl~~~p   80 (87)
                      --+|..-..|+..||....+.+  ..-...|.|+.+++..+..|.+|.++|...+..|...-..|+.+..-+|
T Consensus       116 ~~qF~~da~e~e~Wl~~~~e~~~~~~s~d~g~d~~s~~~LLkkh~~le~~l~~~~~~i~~L~~~a~~l~~l~~  188 (283)
T 3pe0_A          116 YFQFFSDVREAEGQLQKLQEALRRKYSCDRSATVTRLEDLLQDAQDEKEQLNEYKGHLSGLAKRAKAVVQLKP  188 (283)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCSHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTTCCCCGG
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccC
Confidence            3456677778889887333322  2345679999999999999999999999999999999999999985333

>1g8x_A Myosin II heavy chain fused to alpha-actinin 3; motor, lever ARM, protein engineering, structural protein; HET: ADP; 2.80A {Dictyostelium discoideum} SCOP: k.1.1.1

Probab=94.62  E-value=0.024  Score=49.21  Aligned_cols=69  Identities=16%  Similarity=0.163  Sum_probs=57.0

Q ss_pred             HHHHHHHHHHHHHHHhhhHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhHhHHHHH-HHHHHHHHhhhcCC
Q psy11245         11 NALLLNLRELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLEDKRAIIE-NSILSGRQYLNEAS   80 (87)
Q Consensus        11 ~~L~~sLqELl~Wl~~kd~eL~~q~PigGDv~~Vq~Q~~~Hk~f~rEL~~k~~~V~-~~L~s~r~fl~~~p   80 (87)
                      .++..--.+.-+|+..|+.-|+.. ..|-|+.+|+..+..|.+|..+|..++.-|. ..-..|..++....
T Consensus       889 qkF~rka~~~e~Wl~ek~~~l~s~-d~g~dL~~Vqal~KKhea~e~dl~a~e~ri~~~l~~~a~eL~~~~y  958 (1010)
T 1g8x_A          889 QKYNRILKKLENWATTKSVYLGSN-ETGDSITAVQAKLKNLEAFDGECQSLEGQSNSDLLSILAQLTELNY  958 (1010)
T ss_dssp             HHHHHHHHHHHHHHHHTHHHHSSC-CSCCSTTTTGGGTTSHHHHTTTTTHHHHTHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHhccc-cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            445555566788999999999875 4788999999999999999999999999998 67777888775443

>1wlx_A Alpha-actinin 4; three-helix bundle, protein binding; NMR {Homo sapiens}

Probab=93.96  E-value=0.4  Score=32.89  Aligned_cols=49  Identities=18%  Similarity=0.195  Sum_probs=42.2

Q ss_pred             HHHHHHHhhhHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhHhHHHHHHH
Q psy11245         19 ELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLEDKRAIIENS   68 (87)
Q Consensus        19 ELl~Wl~~kd~eL~~q~PigGDv~~Vq~Q~~~Hk~f~rEL~~k~~~V~~~   68 (87)
                      -+-.|+.-+++.|+ .+=+...+..|+..+..|.+|+..|.+.+.-+...
T Consensus        23 ~fNnW~e~A~EdL~-D~~~v~sleEI~~L~~~He~F~~~L~~a~~e~~~i   71 (129)
T 1wlx_A           23 PFNNWMESAMEDLQ-DMFIVHTIEEIEGLISAHDQFKSTLPDADREREAI   71 (129)
T ss_dssp             HHHHHHHHHHHHHH-SCCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhHHHHhc-cchhhccHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence            45789999999999 66666999999999999999999997777666655

>2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A {Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A*

Probab=87.25  E-value=0.5  Score=40.93  Aligned_cols=55  Identities=16%  Similarity=0.210  Sum_probs=47.2

Q ss_pred             HHHHhhhHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhHhHHHHH-HHHHHHHHhhh
Q psy11245         22 DWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLEDKRAIIE-NSILSGRQYLN   77 (87)
Q Consensus        22 ~Wl~~kd~eL~~q~PigGDv~~Vq~Q~~~Hk~f~rEL~~k~~~V~-~~L~s~r~fl~   77 (87)
                      +|+..|++-|+..-+ |-|+..|+.....|.+|..+|..++..|. .....|+.+.+
T Consensus       892 ~Wl~eke~~l~s~d~-g~dl~~vqallkKhea~e~dl~a~e~ri~~~l~~~a~~L~~  947 (995)
T 2ycu_A          892 NWATTKSVYLGSNET-GDSITAVQAKLKNLEAFDGECQSLEGQSNSDLLSILAQLTE  947 (995)
T ss_dssp             CHHHHHHHHHHHHTH-HHHHHHHHHHHHHHHHHHHHHHHTTTCSCSSHHHHHHHHTT
T ss_pred             HHHHHHHHHhccccc-ccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            377788888887654 88999999999999999999999999987 77788888774

>1g8x_A Myosin II heavy chain fused to alpha-actinin 3; motor, lever ARM, protein engineering, structural protein; HET: ADP; 2.80A {Dictyostelium discoideum} SCOP: k.1.1.1

Probab=80.34  E-value=11  Score=32.71  Aligned_cols=47  Identities=23%  Similarity=0.437  Sum_probs=38.5

Q ss_pred             HHHHHHHHHHHHHhhhHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhH
Q psy11245         13 LLLNLRELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLED   60 (87)
Q Consensus        13 L~~sLqELl~Wl~~kd~eL~~q~PigGDv~~Vq~Q~~~Hk~f~rEL~~   60 (87)
                      +..--.+++.|+..+...+... ..+.++..||.....|+.|+++.+.
T Consensus       771 Y~~~a~~L~~WIr~kqa~l~~r-~~~~sl~~IQ~ll~~f~~fk~~~kp  817 (1010)
T 1g8x_A          771 YLKRANELVQWINDKQASLESR-DFGDSIESVQSFMNAHKEYKKTEKP  817 (1010)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCC-CCCSSHHHHHHHHHHHHHHHHTSHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhh-hccccHHHHHHHHHHHHHHHhccCC
Confidence            3344457899999999877654 5799999999999999999998763

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	87
d1u5pa1	110	Spectrin alpha chain {Chicken (Gallus gallus) [Tax	99.37
d1cuna2	104	Spectrin alpha chain {Chicken (Gallus gallus) [Tax	99.26
d1quua1	124	alpha-actinin {Human (Homo sapiens) [TaxId: 9606]}	99.25
d1u5pa2	101	Spectrin alpha chain {Chicken (Gallus gallus) [Tax	99.2
d1s35a1	106	Spectrin beta chain {Human (Homo sapiens) [TaxId:	99.16
d1s35a2	105	Spectrin beta chain {Human (Homo sapiens) [TaxId:	99.09
d1hcia4	114	alpha-actinin {Human (Homo sapiens) [TaxId: 9606]}	99.09
d1owaa_	156	Spectrin alpha chain {Human (Homo sapiens) [TaxId:	98.93
d1quua2	124	alpha-actinin {Human (Homo sapiens) [TaxId: 9606]}	98.87
d2spca_	107	Spectrin alpha chain {Drosophila sp. [TaxId: 7242]	98.79
d1hcia1	125	alpha-actinin {Human (Homo sapiens) [TaxId: 9606]}	95.02

>d1u5pa1 a.7.1.1 (A:1662-1771) Spectrin alpha chain {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: Spectrin repeat-like
superfamily: Spectrin repeat
family: Spectrin repeat
domain: Spectrin alpha chain
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.37  E-value=2.5e-12  Score=80.14  Aligned_cols=72  Identities=8%  Similarity=0.213  Sum_probs=66.6

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHhhhcCC
Q psy11245          8 EHWNALLLNLRELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLEDKRAIIENSILSGRQYLNEAS   80 (87)
Q Consensus         8 ~~w~~L~~sLqELl~Wl~~kd~eL~~q~PigGDv~~Vq~Q~~~Hk~f~rEL~~k~~~V~~~L~s~r~fl~~~p   80 (87)
                      .+|.+|...+++|+.||..++..|+ ..|+|+|++.|+.++..|+.|+.|+..+.+.|.++...|..++...|
T Consensus         2 ~~~q~F~~~~~el~~Wl~e~e~~l~-~~~~g~d~~~~~~~~~~h~~~~~ei~~~~~~i~~l~~~~~~L~~~~~   73 (110)
T d1u5pa1           2 NKQQNFNTGIKDFDFWLSEVEALLA-SEDYGKDLASVNNLLKKHQLLEADISAHEDRLKDLNSQADSLMTSSA   73 (110)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHT-CCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSS
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhc-CCCCCCCHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhcCC
Confidence            4688999999999999999988776 58999999999999999999999999999999999999999996554

>d1cuna2 a.7.1.1 (A:116-219) Spectrin alpha chain {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: Spectrin repeat-like
superfamily: Spectrin repeat
family: Spectrin repeat
domain: Spectrin alpha chain
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.26  E-value=2.4e-11  Score=75.29  Aligned_cols=68  Identities=15%  Similarity=0.326  Sum_probs=62.5

Q ss_pred             HHHHHHHHHHHHHHhhhHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHhhhcCC
Q psy11245         12 ALLLNLRELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLEDKRAIIENSILSGRQYLNEAS   80 (87)
Q Consensus        12 ~L~~sLqELl~Wl~~kd~eL~~q~PigGDv~~Vq~Q~~~Hk~f~rEL~~k~~~V~~~L~s~r~fl~~~p   80 (87)
                      +|...+++++.||..++..|+. .++|+|+++|+.++..|+.|..|+.++++.|..+...|+.++..+|
T Consensus         1 qF~~~~~e~~~Wl~e~~~~l~~-~~~g~d~~~v~~ll~~h~~~~~ei~~~~~~~~~l~~~g~~L~~~~~   68 (104)
T d1cuna2           1 QFVANVEEEEAWINEKMTLVAS-EDYGDTLAAIQGLLKKHEAFETDFTVHKDRVNDVCANGEDLIKKNN   68 (104)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTC-CCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred             CHHHHHHHHHHHHHHHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCC
Confidence            4788899999999999988865 7899999999999999999999999999999999999999995444

>d1quua1 a.7.1.1 (A:1-124) alpha-actinin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: Spectrin repeat-like
superfamily: Spectrin repeat
family: Spectrin repeat
domain: alpha-actinin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.25  E-value=3.4e-11  Score=76.42  Aligned_cols=79  Identities=14%  Similarity=0.160  Sum_probs=71.1

Q ss_pred             hhhhhhHHHHHHHHHHHHHHHHHHhhhHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHhhhcCC
Q psy11245          2 RLESNSEHWNALLLNLRELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLEDKRAIIENSILSGRQYLNEAS   80 (87)
Q Consensus         2 rLE~~~~~w~~L~~sLqELl~Wl~~kd~eL~~q~PigGDv~~Vq~Q~~~Hk~f~rEL~~k~~~V~~~L~s~r~fl~~~p   80 (87)
                      |++.-..-..+|.....++..||..++..|+...|+|.|+++|+.+...|++|..++..+++.|..+...|+.++..+|
T Consensus         8 R~~~l~~~~q~F~~~~~~l~~Wl~~~e~~l~~~~~~~~d~~~v~~l~~~h~~~~~~i~~~~~~v~~l~~~~~~L~~~~~   86 (124)
T d1quua1           8 RLERLEHLAEKFRQKASTHETWAYGKEQILLQKDYESASLTEVRALLRKHEAFESDLAAHQDRVEQIAAIAQELNELDY   86 (124)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTTHHHHHHCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcc
Confidence            3444444457899999999999999999999999999999999999999999999999999999999999999995554

>d1u5pa2 a.7.1.1 (A:1772-1872) Spectrin alpha chain {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: Spectrin repeat-like
superfamily: Spectrin repeat
family: Spectrin repeat
domain: Spectrin alpha chain
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.20  E-value=9.1e-11  Score=71.70  Aligned_cols=68  Identities=15%  Similarity=0.364  Sum_probs=63.1

Q ss_pred             HHHHHHHHHHHHHHhhhHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHhhhcCC
Q psy11245         12 ALLLNLRELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLEDKRAIIENSILSGRQYLNEAS   80 (87)
Q Consensus        12 ~L~~sLqELl~Wl~~kd~eL~~q~PigGDv~~Vq~Q~~~Hk~f~rEL~~k~~~V~~~L~s~r~fl~~~p   80 (87)
                      +|...+++++.||..++..|+. .++|+|++.|+.+...|+.|+.++..+++.|.++...|..++...|
T Consensus         2 ~F~~~~~el~~Wl~e~~~~l~s-~~~g~d~~~~~~ll~~h~~~~~~i~~~~~~~~~l~~~~~~l~~~~~   69 (101)
T d1u5pa2           2 QFFRDMDDEESWIKEKKLLVSS-EDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQGVLDTGKKLSDDNT   69 (101)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTC-CCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCS
T ss_pred             hhHHHHHHHHHHHHHHHHHhhC-CCCCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCC
Confidence            5788999999999999999976 6789999999999999999999999999999999999999995554

>d1s35a1 a.7.1.1 (A:1063-1168) Spectrin beta chain {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: Spectrin repeat-like
superfamily: Spectrin repeat
family: Spectrin repeat
domain: Spectrin beta chain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.16  E-value=1.7e-10  Score=71.02  Aligned_cols=68  Identities=10%  Similarity=0.285  Sum_probs=62.5

Q ss_pred             HHHHHHHHHHHHHHhhhHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHhhh-cCC
Q psy11245         12 ALLLNLRELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLEDKRAIIENSILSGRQYLN-EAS   80 (87)
Q Consensus        12 ~L~~sLqELl~Wl~~kd~eL~~q~PigGDv~~Vq~Q~~~Hk~f~rEL~~k~~~V~~~L~s~r~fl~-~~p   80 (87)
                      +|+..+++|..||..++..|.. .++|+|++.|+.+...|+.|+.++.++++.|.++.+.|..++. .++
T Consensus         3 ~F~~~~~~l~~Wl~~~e~~l~~-~~~~~d~~~~~~~l~~h~~l~~ei~~~~~~~~~~~~~g~~L~~~~~~   71 (106)
T d1s35a1           3 AFLQDLDDFQAWLSITQKAVAS-EDMPESLPEAEQLLQQHAGIKDEIDGHQDSYQRVKESGEKVIQGQTD   71 (106)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHC-CCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCS
T ss_pred             cHHHHHHHHHHHHHHHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            5788999999999999999886 6779999999999999999999999999999999999999994 443

>d1s35a2 a.7.1.1 (A:1169-1273) Spectrin beta chain {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: Spectrin repeat-like
superfamily: Spectrin repeat
family: Spectrin repeat
domain: Spectrin beta chain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.09  E-value=6.8e-10  Score=68.62  Aligned_cols=70  Identities=10%  Similarity=0.179  Sum_probs=64.0

Q ss_pred             HHHHHHHHHHHHHHHHhhhHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHhhhcCC
Q psy11245         10 WNALLLNLRELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLEDKRAIIENSILSGRQYLNEAS   80 (87)
Q Consensus        10 w~~L~~sLqELl~Wl~~kd~eL~~q~PigGDv~~Vq~Q~~~Hk~f~rEL~~k~~~V~~~L~s~r~fl~~~p   80 (87)
                      |-+|+....++..||..++.-|+. .++|+|+++|+.+...|+.|+++|.++++.|.++...|+.++..++
T Consensus         2 ~q~F~~d~~~~~~Wi~~~e~~l~~-~~~g~dl~~v~~l~k~h~~l~~~l~~~~~~v~~l~~~a~~L~~~~~   71 (105)
T d1s35a2           2 FQEFQKDAKQAEAILSNQEYTLAH-LEPPDSLEAAEAGIRKFEDFLGSMENNRDKVLSPVDSGNKLVAEGN   71 (105)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHC-CCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcC-CCCCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCC
Confidence            567888999999999999888864 5899999999999999999999999999999999999999996554

>d1hcia4 a.7.1.1 (A:633-746) alpha-actinin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: Spectrin repeat-like
superfamily: Spectrin repeat
family: Spectrin repeat
domain: alpha-actinin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.09  E-value=2.1e-10  Score=72.56  Aligned_cols=69  Identities=10%  Similarity=0.153  Sum_probs=63.6

Q ss_pred             HHHHHHHHHHHHHHhhhHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHhhhcCCCC
Q psy11245         12 ALLLNLRELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLEDKRAIIENSILSGRQYLNEASLT   82 (87)
Q Consensus        12 ~L~~sLqELl~Wl~~kd~eL~~q~PigGDv~~Vq~Q~~~Hk~f~rEL~~k~~~V~~~L~s~r~fl~~~pl~   82 (87)
                      +|.....++..||..+.+.|+.  |++||+++|+.++..|++|+.||..+++.|.++...|..++..+|.+
T Consensus         9 ~F~~~a~~~~~Wi~e~~~~l~~--~~~~~~~~ve~~l~~h~~~e~el~~~~~~i~~l~~~g~~L~~~~~~~   77 (114)
T d1hcia4           9 QFAAQANAIGPWIQNKMEEIAR--SSIQITGALEDQMNQLKQYEHNIINYKNNIDKLEGDHQLIQEALVFD   77 (114)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHS--CSCTTTTSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHh--hhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCch
Confidence            5888999999999999999976  77899999999999999999999999999999999999999766544

>d1owaa_ a.7.1.1 (A:) Spectrin alpha chain {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: Spectrin repeat-like
superfamily: Spectrin repeat
family: Spectrin repeat
domain: Spectrin alpha chain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.93  E-value=5.9e-10  Score=72.44  Aligned_cols=76  Identities=14%  Similarity=0.271  Sum_probs=67.8

Q ss_pred             ChhhhhhHHHHHHHHHHHHHHHHHHhhhHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHhhhcC
Q psy11245          1 NRLESNSEHWNALLLNLRELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLEDKRAIIENSILSGRQYLNEA   79 (87)
Q Consensus         1 ~rLE~~~~~w~~L~~sLqELl~Wl~~kd~eL~~q~PigGDv~~Vq~Q~~~Hk~f~rEL~~k~~~V~~~L~s~r~fl~~~   79 (87)
                      .+||.+. ++-+|...+.++..||..++..+..  |+++|+..|+.++..|++|+.|+..+++.|..+...|..++...
T Consensus        47 ~~Le~~~-~~~~F~~~~~~l~~Wl~e~e~~~~~--~~~~d~~~~~~~~~~h~~l~~ei~~~~~~~~~l~~~g~~L~~~~  122 (156)
T d1owaa_          47 QKLEDSY-HLQVFKRDADDLGKWIMEKVNILTD--KSYEDPTNIQGKYQKHQSLEAEVQTKSRLMSELEKTREERFTMG  122 (156)
T ss_dssp             CCSCSCH-HHHHHHHHHHHHHHHHHHHHHHHHH--HHHCCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSSC
T ss_pred             HHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhcc--ccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            3677755 6889999999999999999888875  56799999999999999999999999999999999999998443

>d1quua2 a.7.1.1 (A:125-248) alpha-actinin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: Spectrin repeat-like
superfamily: Spectrin repeat
family: Spectrin repeat
domain: alpha-actinin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.87  E-value=2e-09  Score=68.32  Aligned_cols=66  Identities=12%  Similarity=0.128  Sum_probs=61.8

Q ss_pred             HHHHHHHHHHHHHHhhhHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHhhhc
Q psy11245         12 ALLLNLRELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLEDKRAIIENSILSGRQYLNE   78 (87)
Q Consensus        12 ~L~~sLqELl~Wl~~kd~eL~~q~PigGDv~~Vq~Q~~~Hk~f~rEL~~k~~~V~~~L~s~r~fl~~   78 (87)
                      .|.....+|.+||..++..|+. .++|.|+++|+.+...|++|..||.++++.|.++...|+.++..
T Consensus         9 ~F~~~a~~l~~Wl~~~e~~l~~-~~~g~dl~~v~~ll~kh~~fe~el~~~~~~v~~l~~~~~~L~~~   74 (124)
T d1quua2           9 EFAKRAAPFNNWMEGAMEDLQD-MFIVHSIEEIQSLITAHEQFKATLPEADGERQSIMAIQNEVEKV   74 (124)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTTC-CCCCCSTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhcC-CccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            6788899999999999999996 68999999999999999999999999999999999999999843

>d2spca_ a.7.1.1 (A:) Spectrin alpha chain {Drosophila sp. [TaxId: 7242]}

class: All alpha proteins
fold: Spectrin repeat-like
superfamily: Spectrin repeat
family: Spectrin repeat
domain: Spectrin alpha chain
species: Drosophila sp. [TaxId: 7242]

Probab=98.79  E-value=3.7e-09  Score=64.69  Aligned_cols=70  Identities=10%  Similarity=0.125  Sum_probs=64.3

Q ss_pred             HHHHHHHHHHHHHHHHHhhhHHHhhcCCCCCCHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHhhhcC
Q psy11245          9 HWNALLLNLRELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQLEDKRAIIENSILSGRQYLNEA   79 (87)
Q Consensus         9 ~w~~L~~sLqELl~Wl~~kd~eL~~q~PigGDv~~Vq~Q~~~Hk~f~rEL~~k~~~V~~~L~s~r~fl~~~   79 (87)
                      .+-.|...+++++.||..++..++.. .+|.|++.|+.+...|+.|+.++.++++.|.++...|..|+..+
T Consensus         4 ~lq~F~~~~~~~~~Wl~e~e~~l~~~-~~g~d~~~~~~l~~~h~~~~~ei~~~~~~~~~l~~~~~~L~~~~   73 (107)
T d2spca_           4 DLQLYMRDCELAESWMSAREAFLNAD-DDANAGGNVEALIKKHEDFDKAINGHEQKIAALQTVADQLIAQN   73 (107)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHCCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC
Confidence            46789999999999999999988764 68999999999999999999999999999999999999999543

>d1hcia1 a.7.1.1 (A:272-396) alpha-actinin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: Spectrin repeat-like
superfamily: Spectrin repeat
family: Spectrin repeat
domain: alpha-actinin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.02  E-value=0.018  Score=36.83  Aligned_cols=48  Identities=23%  Similarity=0.309  Sum_probs=41.7

Q ss_pred             HHHHHHHHHHHHHHHHHhhhHHHhhcCCCCCCHHHHHHHHHHHHHHHHH
Q psy11245          9 HWNALLLNLRELSDWVFRKDAELSRLGPIGGDINVLQKQEDDHRAFRRQ   57 (87)
Q Consensus         9 ~w~~L~~sLqELl~Wl~~kd~eL~~q~PigGDv~~Vq~Q~~~Hk~f~rE   57 (87)
                      -...|-.--.+|+.|+..+.+.|... .+.+.++.||++...|..|++.
T Consensus        11 l~~eY~~~As~Ll~Wi~~~~~~L~dr-~f~~t~~~iq~~l~~f~~yr~~   58 (125)
T d1hcia1          11 LMEEYERLASELLEWIRRTIPWLENR-TPEKTMQAMQKKLEDFRDYRRK   58 (125)
T ss_dssp             HHHHHHHHHHHHHTHHHHHHHHTTCC-CCCSSSTTTTHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhCC-CCCCCHHHHHHHHHHHHHHhcc
Confidence            34556666788999999999999975 5889999999999999999887