Psyllid ID: psy11503

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170--
Protein Sequence
LGNVPVSEASVVIAISSPHRQTALSAVEHAINKLKEMAPIWKKEEYAPGTHTDAQWKENSECMWRVVSLHYEAYKSMALKVFKDICNNLRETWPDIVNVAIYHRLGNVPVSEASVVIAISSPHRQTALSAVEHAINKLKEMAPIWKKEEYAPGTHTDAQWKENSECMWRVKH
Secondary Structure (PSIPRED)
cccccccccEEEEEEEcccHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccEEEEEEcccHHHHHHHHHHHHHHHHHccccccEEEEEEEEccccccccEEEEEEEcccHHHHHHHHHHHHHHHcccccccccEEccccccccccccccccHHHHHcc
Secondary Structure Prediction (SSPRO)
cccEccccEEEEEEEccHcHHHHHHHHHHHHHHHHHccccHHHccccccEEEEEEEEEcccccccEEEEEEEccHHHHHHHHHHHHHHHHHHcccccEEEEEEEEcccccccEEEEEEEccHHHHHHHHHHHHHHHHHHHccccEEEEccccccccccccccHHHHHHHHcc
Coil and Loop (DISEMBL)
LGNVPVSEASVVIAISSPHRQTALSAVEHAINKLKEMapiwkkeeyapgthtdaqwkensECMWRVVSLHYEAYKSMALKVFKDICNNLRETWPDIVNVAIYHrlgnvpvseASVVIAISSPHRQTALSAVEHAINKLKEMapiwkkeeyapgthtdaqwkensecmwrvkh
Flexible Loop (DISEMBL)
LGNVPVSEASVVIaissphrqtALSAVEHAINKLKEMAPIWKKEEYAPGTHTDAQWKENSECMWRVVSLHYEAYKSMALKVFKDICNNLRETWPDIVNVAIYHRLGNVPVSEASVVIAISSPHRQTALSAVEHAINKLKEMAPIWKKeeyapgthtdaqwkensecmwrvkh
Low Complexity Region (SEG)
LGNvpvseasvviaisspHRQTALSAVEHAINKLKEMAPIWKKEEYAPGTHTDAQWKENSECMWRVVSLHYEAYKSMALKVFKDICNNLRETWPDIVNVAIYHRLGNvpvseasvviaisspHRQTALSAVEHAINKLKEMAPIWKKEEYAPGTHTDAQWKENSECMWRVKH
Disordered region (IsUnstruct)
***********VIAI*******ALSAVEHAINKLKEMAPIWKKEEYAPGTHTDAQWKENSECMWRVVSLHYEAYKSMALKVFKDICNNLRETWPDIVNVAIYHRLGNVPVSEASVVIAISSPHRQTALSAVEHAINKLKEMAPIWKKEEYA*********************
Disordered Region (DISOPRED)
LGNVPVSEASVVIAISSPHRQTALSAVEHAINKLKEMAPIWKKEEYAPGTHTDAQWKENSECMWRVVSLHYEAYKSMALKVFKDICNNLRETWPDIVNVAIYHRLGNVPVSEASVVIAISSPHRQTALSAVEHAINKLKEMAPIWKKEEYAPGTHTDAQWKENSECM*****
Disordered Region (DISEMBL)
LGNVPVSEASVVIAISSPHRQTALSAVEHAINKLKEMAPIWKKEEYAPGTHTDAQWKENSECMWRVVSLHYEAYKSMALKVFKDICNNLRETWPDIVNVAIYHRLGNVPVSEASVVIAISSPHRQTALSAVEHAINKLKEMAPIWKKEEYAPGTHTDAQWKENSECMWRVKH
Disordered Region (DISPRO)
*GNVPVSEASVVIAISSPHRQTALSAVEHAINKLKEMAPIWKKEEYAPGTHTDAQWKENSECMWRVVSLHYEAYKSMALKVFKDICNNLRETWPDIVNVAIYHRLGNVPVSEASVVIAISSPHRQTALSAVEHAINKLKEMAPIWKKEEYAPGTHTDAQWKENSECM*****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
LGNVPVSEASVVIAISSPHRQTALSAVEHAINKLKEMAPIWKKEEYAPGTHTDAQWKENSECMWRVVSLHYEAYKSMALKVFKDICNNLRETWPDIVNVAIYHRLGNVPVSEASVVIAISSPHRQTALSAVEHAINKLKEMAPIWKKEEYAPGTHTDAQWKENSECMWRVKH
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	172	2.2.26 [Sep-21-2011]
Q171H3	155	Molybdopterin synthase ca	N/A	N/A	0.616	0.683	0.579	3e-30
Q1DGL6	155	Molybdopterin synthase ca	N/A	N/A	0.616	0.683	0.579	4e-30
B0X1V5	157	Molybdopterin synthase ca	N/A	N/A	0.593	0.649	0.601	2e-29
B4GE20	361	Molybdopterin synthase ca	N/A	N/A	0.575	0.274	0.633	6e-29
Q297G3	361	Molybdopterin synthase ca	yes	N/A	0.575	0.274	0.633	9e-29
Q7QAD7	154	Molybdopterin synthase ca	yes	N/A	0.610	0.681	0.551	1e-28
B4PUD1	367	Molybdopterin synthase ca	N/A	N/A	0.575	0.269	0.613	9e-28
B4JHP4	362	Molybdopterin synthase ca	N/A	N/A	0.593	0.281	0.567	2e-27
B4NJW0	372	Molybdopterin synthase ca	N/A	N/A	0.610	0.282	0.564	4e-27
B3P6R5	367	Molybdopterin synthase ca	N/A	N/A	0.575	0.269	0.613	4e-27

>sp|Q171H3|MO2B1_AEDAE Molybdopterin synthase catalytic subunit 1 OS=Aedes aegypti GN=AAEL007640 PE=3 SV=1

 Score =  130 bits (328), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 62/107 (57%), Positives = 78/107 (72%), Gaps = 1/107 (0%)

Query: 66  VVSLHYEAYKSMALKVFKDICNNLRETWPDIVNVAIYHRLGNVPVSEASVVIAISSPHRQ 125
           VV L YEAY++MALK    IC  LR  WPDI ++ I+HRLG VPV EASVVIA+SSPHR+
Sbjct: 44  VVLLEYEAYEAMALKTMNQICEELRARWPDIKHIGIHHRLGTVPVKEASVVIAVSSPHRK 103

Query: 126 TALSAVEHAINKLKEMAPIWKKEEYAPGTHTDAQWKENSECMWRVKH 172
           ++L AV  AI++LK+  P+WKKE+YA G    ++WKEN EC W   H
Sbjct: 104 SSLEAVHFAIDELKKSVPVWKKEQYADGEGC-SEWKENKECSWSKSH 149

Catalytic subunit of the molybdopterin synthase complex, a complex that catalyzes the conversion of precursor Z into molybdopterin. Acts by mediating the incorporation of 2 sulfur atoms from thiocarboxylated MOCS2A into precursor Z to generate a dithiolene group.
Aedes aegypti (taxid: 7159)
EC: 2EC: .EC: 8EC: .EC: 1EC: .EC: 1EC: 2

>sp|Q1DGL6|MO2B2_AEDAE Molybdopterin synthase catalytic subunit 2 OS=Aedes aegypti GN=AAEL015584 PE=3 SV=1

 Score =  130 bits (328), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 62/107 (57%), Positives = 78/107 (72%), Gaps = 1/107 (0%)

Query: 66  VVSLHYEAYKSMALKVFKDICNNLRETWPDIVNVAIYHRLGNVPVSEASVVIAISSPHRQ 125
           VV L YEAY++MALK    IC  LR  WPDI ++ I+HRLG VPV EASVVIA+SSPHR+
Sbjct: 44  VVLLEYEAYEAMALKTMNQICEELRARWPDIKHIGIHHRLGTVPVKEASVVIAVSSPHRK 103

Query: 126 TALSAVEHAINKLKEMAPIWKKEEYAPGTHTDAQWKENSECMWRVKH 172
           ++L AV  AI++LK+  P+WKKE+YA G    ++WKEN EC W   H
Sbjct: 104 SSLEAVHFAIDELKKSVPVWKKEQYAEGEGC-SEWKENKECSWSKSH 149

Catalytic subunit of the molybdopterin synthase complex, a complex that catalyzes the conversion of precursor Z into molybdopterin. Acts by mediating the incorporation of 2 sulfur atoms from thiocarboxylated MOCS2A into precursor Z to generate a dithiolene group.

Aedes aegypti (taxid: 7159)

EC: 2

EC: .

EC: 8

EC: .

EC: 1

EC: .

EC: 1

EC: 2

>sp|B0X1V5|MOC2B_CULQU Molybdopterin synthase catalytic subunit OS=Culex quinquefasciatus GN=CPIJ013435 PE=3 SV=2

 Score =  127 bits (320), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 62/103 (60%), Positives = 76/103 (73%), Gaps = 1/103 (0%)

Query: 66  VVSLHYEAYKSMALKVFKDICNNLRETWPDIVNVAIYHRLGNVPVSEASVVIAISSPHRQ 125
           VV L YEAY++MALK    IC  LR  W D+V++ I+HRLG VPV EASVVIAISSPHR+
Sbjct: 46  VVLLQYEAYEAMALKSMNHICEELRGRWTDLVHIGIHHRLGTVPVKEASVVIAISSPHRE 105

Query: 126 TALSAVEHAINKLKEMAPIWKKEEYAPGTHTDAQWKENSECMW 168
            AL AV  AI++LK+  P+WKKE+YA G    ++WKEN EC W
Sbjct: 106 AALEAVRWAIDELKKSVPVWKKEQYAEGQGC-SEWKENKECTW 147

Catalytic subunit of the molybdopterin synthase complex, a complex that catalyzes the conversion of precursor Z into molybdopterin. Acts by mediating the incorporation of 2 sulfur atoms from thiocarboxylated MOCS2A into precursor Z to generate a dithiolene group.

Culex quinquefasciatus (taxid: 7176)

EC: 2

EC: .

EC: 8

EC: .

EC: 1

EC: .

EC: 1

EC: 2

>sp|B4GE20|MOC2B_DROPE Molybdopterin synthase catalytic subunit OS=Drosophila persimilis GN=GL21938 PE=3 SV=1

 Score =  126 bits (317), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 64/101 (63%), Positives = 77/101 (76%), Gaps = 2/101 (1%)

Query: 65  RVVSLHYEAYKSMALKVFKDICNNLRETWPDIVNVAIYHRLGNVPVSEASVVIAISSPHR 124
           +VVSL YEAY++MALK    IC++LR TWPD+ ++ IYHRLG VP +EASVVIA S+PHR
Sbjct: 43  KVVSLAYEAYENMALKEMDKICSDLRATWPDLKHILIYHRLGTVPENEASVVIAASAPHR 102

Query: 125 QTALSAVEHAINKLKEMAPIWKKEEYAPGTHTDAQWKENSE 165
             AL AV  AI++LK   PIWKKE Y  G H DA+WKENSE
Sbjct: 103 SAALKAVTFAIDQLKSRVPIWKKELYE-GNH-DAEWKENSE 141

Catalytic subunit of the molybdopterin synthase complex, a complex that catalyzes the conversion of precursor Z into molybdopterin. Acts by mediating the incorporation of 2 sulfur atoms from thiocarboxylated MOCS2A into precursor Z to generate a dithiolene group.

Drosophila persimilis (taxid: 7234)

EC: 2

EC: .

EC: 8

EC: .

EC: 1

EC: .

EC: 1

EC: 2

>sp|Q297G3|MOC2B_DROPS Molybdopterin synthase catalytic subunit OS=Drosophila pseudoobscura pseudoobscura GN=GA10181 PE=3 SV=2

 Score =  126 bits (316), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 64/101 (63%), Positives = 77/101 (76%), Gaps = 2/101 (1%)

Query: 65  RVVSLHYEAYKSMALKVFKDICNNLRETWPDIVNVAIYHRLGNVPVSEASVVIAISSPHR 124
           +VVSL YEAY++MALK    IC++LR TWPD+ ++ IYHRLG VP +EASVVIA S+PHR
Sbjct: 43  KVVSLAYEAYENMALKEMDKICSDLRATWPDLKHILIYHRLGTVPENEASVVIAASAPHR 102

Query: 125 QTALSAVEHAINKLKEMAPIWKKEEYAPGTHTDAQWKENSE 165
             AL AV  AI++LK   PIWKKE Y  G H DA+WKENSE
Sbjct: 103 SAALKAVTFAIDQLKSRVPIWKKEIY-EGNH-DAEWKENSE 141

Catalytic subunit of the molybdopterin synthase complex, a complex that catalyzes the conversion of precursor Z into molybdopterin. Acts by mediating the incorporation of 2 sulfur atoms from thiocarboxylated MOCS2A into precursor Z to generate a dithiolene group.

Drosophila pseudoobscura pseudoobscura (taxid: 46245)

EC: 2

EC: .

EC: 8

EC: .

EC: 1

EC: .

EC: 1

EC: 2

>sp|Q7QAD7|MOC2B_ANOGA Molybdopterin synthase catalytic subunit OS=Anopheles gambiae GN=AGAP013168 PE=3 SV=4

 Score =  125 bits (314), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 59/107 (55%), Positives = 77/107 (71%), Gaps = 2/107 (1%)

Query: 66  VVSLHYEAYKSMALKVFKDICNNLRETWPDIVNVAIYHRLGNVPVSEASVVIAISSPHRQ 125
           VV L YEAY++MA+K    +C  +R  WPD+VN+ I+HRLG VPV EASVVIAISSPHR+
Sbjct: 44  VVLLEYEAYEAMAIKTMNLLCEEVRARWPDVVNIGIHHRLGTVPVKEASVVIAISSPHRK 103

Query: 126 TALSAVEHAINKLKEMAPIWKKEEYAPGTHTDAQWKENSECMWRVKH 172
           ++L AV   I++LK+  P+WKKE Y       ++WKENSEC W  K+
Sbjct: 104 SSLEAVHFTIDELKKSVPVWKKELY--DGEGSSEWKENSECTWSKKY 148

Catalytic subunit of the molybdopterin synthase complex, a complex that catalyzes the conversion of precursor Z into molybdopterin. Acts by mediating the incorporation of 2 sulfur atoms from thiocarboxylated MOCS2A into precursor Z to generate a dithiolene group.

Anopheles gambiae (taxid: 7165)

EC: 2

EC: .

EC: 8

EC: .

EC: 1

EC: .

EC: 1

EC: 2

>sp|B4PUD1|MOC2B_DROYA Molybdopterin synthase catalytic subunit OS=Drosophila yakuba GN=GE10737 PE=3 SV=1

 Score =  122 bits (307), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 62/101 (61%), Positives = 74/101 (73%), Gaps = 2/101 (1%)

Query: 65  RVVSLHYEAYKSMALKVFKDICNNLRETWPDIVNVAIYHRLGNVPVSEASVVIAISSPHR 124
           +VVSL YEAY SMALK    IC++LR  WPD+ ++ IYHRLG VPV EASVVIA SSPHR
Sbjct: 43  KVVSLAYEAYDSMALKEMNKICSDLRSKWPDLKHIVIYHRLGTVPVCEASVVIAASSPHR 102

Query: 125 QTALSAVEHAINKLKEMAPIWKKEEYAPGTHTDAQWKENSE 165
             AL +V  AI++LK   PIWKKE Y  G + D++WKEN E
Sbjct: 103 SEALESVSFAIDQLKTRVPIWKKEIYE-GDY-DSEWKENKE 141

Catalytic subunit of the molybdopterin synthase complex, a complex that catalyzes the conversion of precursor Z into molybdopterin. Acts by mediating the incorporation of 2 sulfur atoms from thiocarboxylated MOCS2A into precursor Z to generate a dithiolene group.

Drosophila yakuba (taxid: 7245)

EC: 2

EC: .

EC: 8

EC: .

EC: 1

EC: .

EC: 1

EC: 2

>sp|B4JHP4|MOC2B_DROGR Molybdopterin synthase catalytic subunit OS=Drosophila grimshawi GN=GH19575 PE=3 SV=1

 Score =  122 bits (305), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 59/104 (56%), Positives = 72/104 (69%), Gaps = 2/104 (1%)

Query: 65  RVVSLHYEAYKSMALKVFKDICNNLRETWPDIVNVAIYHRLGNVPVSEASVVIAISSPHR 124
           +V+SL YE+Y+ MALK    IC+ LR  WPD+ ++AIYHRLG VPV EASVVIA S+PHR
Sbjct: 43  KVISLEYESYEKMALKEMSKICSQLRARWPDLKHIAIYHRLGTVPVKEASVVIATSAPHR 102

Query: 125 QTALSAVEHAINKLKEMAPIWKKEEYAPGTHTDAQWKENSECMW 168
             AL +V  A+ +LK   PIWKKE Y     T  +WKEN EC W
Sbjct: 103 AAALESVTFAVEQLKSRVPIWKKEIYE--NDTIGEWKENMECPW 144

Catalytic subunit of the molybdopterin synthase complex, a complex that catalyzes the conversion of precursor Z into molybdopterin. Acts by mediating the incorporation of 2 sulfur atoms from thiocarboxylated MOCS2A into precursor Z to generate a dithiolene group.

Drosophila grimshawi (taxid: 7222)

EC: 2

EC: .

EC: 8

EC: .

EC: 1

EC: .

EC: 1

EC: 2

>sp|B4NJW0|MOC2B_DROWI Molybdopterin synthase catalytic subunit OS=Drosophila willistoni GN=GK13883 PE=3 SV=1

 Score =  120 bits (301), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 61/108 (56%), Positives = 77/108 (71%), Gaps = 3/108 (2%)

Query: 65  RVVSLHYEAYKSMALKVFKDICNNLRETWPDIVNVAIYHRLGNVPVSEASVVIAISSPHR 124
           +V+SL YEAY+ MA+K  K IC +LR  WPD+ ++ IYHRLG+VPV EASVVIA S+PHR
Sbjct: 43  KVLSLEYEAYEPMAIKEMKTICTDLRAKWPDLKHIVIYHRLGSVPVGEASVVIATSAPHR 102

Query: 125 QTALSAVEHAINKLKEMAPIWKKEEYAPGTHTDAQWKENSECMWRVKH 172
            +AL +V  A+++LK   PIWKKE Y       AQWKEN E + R KH
Sbjct: 103 LSALESVSLAVDQLKTRVPIWKKELYE--GDDPAQWKENKESL-RPKH 147

Catalytic subunit of the molybdopterin synthase complex, a complex that catalyzes the conversion of precursor Z into molybdopterin. Acts by mediating the incorporation of 2 sulfur atoms from thiocarboxylated MOCS2A into precursor Z to generate a dithiolene group.

Drosophila willistoni (taxid: 7260)

EC: 2

EC: .

EC: 8

EC: .

EC: 1

EC: .

EC: 1

EC: 2

>sp|B3P6R5|MOC2B_DROER Molybdopterin synthase catalytic subunit OS=Drosophila erecta GN=GG12284 PE=3 SV=1

 Score =  120 bits (301), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 62/101 (61%), Positives = 72/101 (71%), Gaps = 2/101 (1%)

Query: 65  RVVSLHYEAYKSMALKVFKDICNNLRETWPDIVNVAIYHRLGNVPVSEASVVIAISSPHR 124
           +VVSL YEAY SMALK    IC +LR  WPD+ ++ IYHRLG VPV EASVVIA SSPHR
Sbjct: 43  KVVSLAYEAYDSMALKEMNKICLDLRSKWPDLKHIVIYHRLGTVPVCEASVVIAASSPHR 102

Query: 125 QTALSAVEHAINKLKEMAPIWKKEEYAPGTHTDAQWKENSE 165
             AL +V  AI++LK   PIWKKE Y  G H  ++WKEN E
Sbjct: 103 SEALESVSFAIDQLKTRVPIWKKEIYE-GDHV-SEWKENKE 141

Catalytic subunit of the molybdopterin synthase complex, a complex that catalyzes the conversion of precursor Z into molybdopterin. Acts by mediating the incorporation of 2 sulfur atoms from thiocarboxylated MOCS2A into precursor Z to generate a dithiolene group.

Drosophila erecta (taxid: 7220)

EC: 2

EC: .

EC: 8

EC: .

EC: 1

EC: .

EC: 1

EC: 2

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	172
312382622	206	hypothetical protein AND_04547 [Anophele	0.616	0.514	0.579	1e-29
157116548	155	molybdopterin synthase large subunit, pu	0.616	0.683	0.579	1e-28
157140219	155	molybdopterin synthase large subunit, pu	0.616	0.683	0.579	2e-28
289740959	153	molybdopterin converting factor subunit	0.587	0.660	0.586	7e-28
170055540	243	molybdenum cofactor synthesis protein 2	0.593	0.419	0.601	8e-28
226707549	157	RecName: Full=Molybdopterin synthase cat	0.593	0.649	0.601	1e-27
195151657	361	GL21938 [Drosophila persimilis] gi|22670	0.575	0.274	0.633	3e-27
198453170	361	GA10181 [Drosophila pseudoobscura pseudo	0.575	0.274	0.633	4e-27
347971640	154	AGAP013168-PA [Anopheles gambiae str. PE	0.610	0.681	0.551	6e-27
270009873	315	hypothetical protein TcasGA2_TC009192 [T	0.593	0.323	0.592	7e-27

>gi|312382622|gb|EFR28018.1| hypothetical protein AND_04547 [Anopheles darlingi]

 Score =  134 bits (336), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 62/107 (57%), Positives = 80/107 (74%), Gaps = 1/107 (0%)

Query: 66  VVSLHYEAYKSMALKVFKDICNNLRETWPDIVNVAIYHRLGNVPVSEASVVIAISSPHRQ 125
           VV L YEAY++MALK    +C  +R  WPD+VN+ I+HRLG VPV EASVVIAISSPHRQ
Sbjct: 95  VVLLQYEAYEAMALKTMNHLCEEVRGRWPDVVNIGIHHRLGTVPVKEASVVIAISSPHRQ 154

Query: 126 TALSAVEHAINKLKEMAPIWKKEEYAPGTHTDAQWKENSECMWRVKH 172
           ++L AV   I++LK+  P+WKKE+Y  G  + ++WKENSEC W  K+
Sbjct: 155 SSLEAVHFTIDELKKSVPVWKKEQYREGEGS-SEWKENSECTWSQKY 200

Source: Anopheles darlingi

Species: Anopheles darlingi

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157116548|ref|XP_001658545.1| molybdopterin synthase large subunit, putative [Aedes aegypti] gi|122068178|sp|Q171H3.1|MO2B1_AEDAE RecName: Full=Molybdopterin synthase catalytic subunit 1; AltName: Full=Molybdenum cofactor synthesis protein 2 large subunit 1; AltName: Full=Molybdenum cofactor synthesis protein 2B 1; Short=MOCS2B 1 gi|108876418|gb|EAT40643.1| AAEL007640-PA [Aedes aegypti]

 Score =  130 bits (328), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 62/107 (57%), Positives = 78/107 (72%), Gaps = 1/107 (0%)

Query: 66  VVSLHYEAYKSMALKVFKDICNNLRETWPDIVNVAIYHRLGNVPVSEASVVIAISSPHRQ 125
           VV L YEAY++MALK    IC  LR  WPDI ++ I+HRLG VPV EASVVIA+SSPHR+
Sbjct: 44  VVLLEYEAYEAMALKTMNQICEELRARWPDIKHIGIHHRLGTVPVKEASVVIAVSSPHRK 103

Query: 126 TALSAVEHAINKLKEMAPIWKKEEYAPGTHTDAQWKENSECMWRVKH 172
           ++L AV  AI++LK+  P+WKKE+YA G    ++WKEN EC W   H
Sbjct: 104 SSLEAVHFAIDELKKSVPVWKKEQYADGEGC-SEWKENKECSWSKSH 149

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157140219|ref|XP_001647626.1| molybdopterin synthase large subunit, putative [Aedes aegypti] gi|122096054|sp|Q1DGL6.1|MO2B2_AEDAE RecName: Full=Molybdopterin synthase catalytic subunit 2; AltName: Full=Molybdenum cofactor synthesis protein 2 large subunit 2; AltName: Full=Molybdenum cofactor synthesis protein 2B 2; Short=MOCS2B 2 gi|108866552|gb|EAT32294.1| AAEL015584-PA [Aedes aegypti]

 Score =  130 bits (328), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 62/107 (57%), Positives = 78/107 (72%), Gaps = 1/107 (0%)

Query: 66  VVSLHYEAYKSMALKVFKDICNNLRETWPDIVNVAIYHRLGNVPVSEASVVIAISSPHRQ 125
           VV L YEAY++MALK    IC  LR  WPDI ++ I+HRLG VPV EASVVIA+SSPHR+
Sbjct: 44  VVLLEYEAYEAMALKTMNQICEELRARWPDIKHIGIHHRLGTVPVKEASVVIAVSSPHRK 103

Query: 126 TALSAVEHAINKLKEMAPIWKKEEYAPGTHTDAQWKENSECMWRVKH 172
           ++L AV  AI++LK+  P+WKKE+YA G    ++WKEN EC W   H
Sbjct: 104 SSLEAVHFAIDELKKSVPVWKKEQYAEGEGC-SEWKENKECSWSKSH 149

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|289740959|gb|ADD19227.1| molybdopterin converting factor subunit 2 [Glossina morsitans morsitans]

 Score =  128 bits (322), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 61/104 (58%), Positives = 77/104 (74%), Gaps = 3/104 (2%)

Query: 65  RVVSLHYEAYKSMALKVFKDICNNLRETWPDIVNVAIYHRLGNVPVSEASVVIAISSPHR 124
           RVVSL YEAY+ MALK   +IC+ +R+ WPD +N+AIYHRLG VPV +ASVVI ISSPHR
Sbjct: 43  RVVSLEYEAYEPMALKQLGNICDEIRKRWPDCLNIAIYHRLGLVPVGQASVVIGISSPHR 102

Query: 125 QTALSAVEHAINKLKEMAPIWKKEEYAPGTHTDAQWKENSECMW 168
           Q +L +V  AI++LK+  PIWKKE Y    + ++ WK N EC W
Sbjct: 103 QVSLESVAFAIDELKKTVPIWKKEVY---DNHESAWKANKECQW 143

Source: Glossina morsitans morsitans

Species: Glossina morsitans

Genus: Glossina

Family: Glossinidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170055540|ref|XP_001863627.1| molybdenum cofactor synthesis protein 2 large subunit [Culex quinquefasciatus] gi|167875450|gb|EDS38833.1| molybdenum cofactor synthesis protein 2 large subunit [Culex quinquefasciatus]

 Score =  128 bits (322), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 62/103 (60%), Positives = 76/103 (73%), Gaps = 1/103 (0%)

Query: 66  VVSLHYEAYKSMALKVFKDICNNLRETWPDIVNVAIYHRLGNVPVSEASVVIAISSPHRQ 125
           VV L YEAY++MALK    IC  LR  W D+V++ I+HRLG VPV EASVVIAISSPHR+
Sbjct: 132 VVLLQYEAYEAMALKSMNHICEELRGRWTDLVHIGIHHRLGTVPVKEASVVIAISSPHRE 191

Query: 126 TALSAVEHAINKLKEMAPIWKKEEYAPGTHTDAQWKENSECMW 168
            AL AV  AI++LK+  P+WKKE+YA G    ++WKEN EC W
Sbjct: 192 AALEAVRWAIDELKKSVPVWKKEQYAEGQGC-SEWKENKECTW 233

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|226707549|sp|B0X1V5.2|MOC2B_CULQU RecName: Full=Molybdopterin synthase catalytic subunit; AltName: Full=Molybdenum cofactor synthesis protein 2 large subunit; AltName: Full=Molybdenum cofactor synthesis protein 2B; Short=MOCS2B

 Score =  127 bits (320), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 62/103 (60%), Positives = 76/103 (73%), Gaps = 1/103 (0%)

Query: 66  VVSLHYEAYKSMALKVFKDICNNLRETWPDIVNVAIYHRLGNVPVSEASVVIAISSPHRQ 125
           VV L YEAY++MALK    IC  LR  W D+V++ I+HRLG VPV EASVVIAISSPHR+
Sbjct: 46  VVLLQYEAYEAMALKSMNHICEELRGRWTDLVHIGIHHRLGTVPVKEASVVIAISSPHRE 105

Query: 126 TALSAVEHAINKLKEMAPIWKKEEYAPGTHTDAQWKENSECMW 168
            AL AV  AI++LK+  P+WKKE+YA G    ++WKEN EC W
Sbjct: 106 AALEAVRWAIDELKKSVPVWKKEQYAEGQGC-SEWKENKECTW 147

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195151657|ref|XP_002016755.1| GL21938 [Drosophila persimilis] gi|226707488|sp|B4GE20.1|MOC2B_DROPE RecName: Full=Molybdopterin synthase catalytic subunit; AltName: Full=Molybdenum cofactor synthesis protein 2 large subunit; AltName: Full=Molybdenum cofactor synthesis protein 2B; Short=MOCS2B gi|194111812|gb|EDW33855.1| GL21938 [Drosophila persimilis]

 Score =  126 bits (317), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 64/101 (63%), Positives = 77/101 (76%), Gaps = 2/101 (1%)

Query: 65  RVVSLHYEAYKSMALKVFKDICNNLRETWPDIVNVAIYHRLGNVPVSEASVVIAISSPHR 124
           +VVSL YEAY++MALK    IC++LR TWPD+ ++ IYHRLG VP +EASVVIA S+PHR
Sbjct: 43  KVVSLAYEAYENMALKEMDKICSDLRATWPDLKHILIYHRLGTVPENEASVVIAASAPHR 102

Query: 125 QTALSAVEHAINKLKEMAPIWKKEEYAPGTHTDAQWKENSE 165
             AL AV  AI++LK   PIWKKE Y  G H DA+WKENSE
Sbjct: 103 SAALKAVTFAIDQLKSRVPIWKKELYE-GNH-DAEWKENSE 141

Source: Drosophila persimilis

Species: Drosophila persimilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|198453170|ref|XP_001359099.2| GA10181 [Drosophila pseudoobscura pseudoobscura] gi|226707545|sp|Q297G3.2|MOC2B_DROPS RecName: Full=Molybdopterin synthase catalytic subunit; AltName: Full=Molybdenum cofactor synthesis protein 2 large subunit; AltName: Full=Molybdenum cofactor synthesis protein 2B; Short=MOCS2B gi|198132241|gb|EAL28242.2| GA10181 [Drosophila pseudoobscura pseudoobscura]

 Score =  126 bits (316), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 64/101 (63%), Positives = 77/101 (76%), Gaps = 2/101 (1%)

Query: 65  RVVSLHYEAYKSMALKVFKDICNNLRETWPDIVNVAIYHRLGNVPVSEASVVIAISSPHR 124
           +VVSL YEAY++MALK    IC++LR TWPD+ ++ IYHRLG VP +EASVVIA S+PHR
Sbjct: 43  KVVSLAYEAYENMALKEMDKICSDLRATWPDLKHILIYHRLGTVPENEASVVIAASAPHR 102

Query: 125 QTALSAVEHAINKLKEMAPIWKKEEYAPGTHTDAQWKENSE 165
             AL AV  AI++LK   PIWKKE Y  G H DA+WKENSE
Sbjct: 103 SAALKAVTFAIDQLKSRVPIWKKEIY-EGNH-DAEWKENSE 141

Source: Drosophila pseudoobscura pseudoobscura

Species: Drosophila pseudoobscura

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|347971640|ref|XP_003436776.1| AGAP013168-PA [Anopheles gambiae str. PEST] gi|226707555|sp|Q7QAD7.4|MOC2B_ANOGA RecName: Full=Molybdopterin synthase catalytic subunit; AltName: Full=Molybdenum cofactor synthesis protein 2 large subunit; AltName: Full=Molybdenum cofactor synthesis protein 2B; Short=MOCS2B gi|333468962|gb|EGK97134.1| AGAP013168-PA [Anopheles gambiae str. PEST]

 Score =  125 bits (314), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 59/107 (55%), Positives = 77/107 (71%), Gaps = 2/107 (1%)

Query: 66  VVSLHYEAYKSMALKVFKDICNNLRETWPDIVNVAIYHRLGNVPVSEASVVIAISSPHRQ 125
           VV L YEAY++MA+K    +C  +R  WPD+VN+ I+HRLG VPV EASVVIAISSPHR+
Sbjct: 44  VVLLEYEAYEAMAIKTMNLLCEEVRARWPDVVNIGIHHRLGTVPVKEASVVIAISSPHRK 103

Query: 126 TALSAVEHAINKLKEMAPIWKKEEYAPGTHTDAQWKENSECMWRVKH 172
           ++L AV   I++LK+  P+WKKE Y       ++WKENSEC W  K+
Sbjct: 104 SSLEAVHFTIDELKKSVPVWKKELY--DGEGSSEWKENSECTWSKKY 148

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270009873|gb|EFA06321.1| hypothetical protein TcasGA2_TC009192 [Tribolium castaneum]

 Score =  125 bits (314), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 61/103 (59%), Positives = 73/103 (70%), Gaps = 1/103 (0%)

Query: 66  VVSLHYEAYKSMALKVFKDICNNLRETWPDIVNVAIYHRLGNVPVSEASVVIAISSPHRQ 125
           V+ L YEAY++MALK  + +C  +R  WP + N+AIYHRLG V V EAS+VIAI+SPHR 
Sbjct: 44  VLKLEYEAYEAMALKCLEKVCGEIRAKWPQVENIAIYHRLGVVGVKEASIVIAIASPHRT 103

Query: 126 TALSAVEHAINKLKEMAPIWKKEEYAPGTHTDAQWKENSECMW 168
            AL A +  INK+KE  PIWKKE YA  T T  QWKEN EC W
Sbjct: 104 EALQATDWCINKVKESVPIWKKEIYAE-TETPPQWKENKECGW 145

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	172
UNIPROTKB|B4GE20	361	GL21938 "Molybdopterin synthas	0.575	0.274	0.524	1.3e-22
UNIPROTKB|Q297G3	361	GA10181 "Molybdopterin synthas	0.575	0.274	0.524	1.3e-22
UNIPROTKB|B4JHP4	362	GH19575 "Molybdopterin synthas	0.593	0.281	0.451	3e-21
UNIPROTKB|B4PUD1	367	GE10737 "Molybdopterin synthas	0.575	0.269	0.485	2.6e-20
UNIPROTKB|B4NJW0	372	GK13883 "Molybdopterin synthas	0.610	0.282	0.462	2.9e-20
UNIPROTKB|B4KBH3	366	GI23778 "Molybdopterin synthas	0.593	0.278	0.451	4.4e-20
UNIPROTKB|B3P6R5	367	GG12284 "Molybdopterin synthas	0.575	0.269	0.485	7.7e-20
UNIPROTKB|F1N8S9	189	MOCS2 "Uncharacterized protein	0.581	0.529	0.423	1.9e-19
UNIPROTKB|B3M268	363	GF17098 "Molybdopterin synthas	0.604	0.286	0.448	3.6e-19
RGD|1359477	200	Mocs2 "molybdenum cofactor syn	0.581	0.5	0.413	6.5e-19

UNIPROTKB|B4GE20 GL21938 "Molybdopterin synthase catalytic subunit" [Drosophila persimilis (taxid:7234)]

 Score = 262 (97.3 bits), Expect = 1.3e-22, P = 1.3e-22
 Identities = 53/101 (52%), Positives = 64/101 (63%)

Query:    65 RVVSLHYEAYKSMALKVFKDICNNLRETWPDIVNVAIYHRLGNXXXXXXXXXXXXXXXHR 124
             +VVSL YEAY++MALK    IC++LR TWPD+ ++ IYHRLG                HR
Sbjct:    43 KVVSLAYEAYENMALKEMDKICSDLRATWPDLKHILIYHRLGTVPENEASVVIAASAPHR 102

Query:   125 QTALSAVEHAINKLKEMAPIWKKEEYAPGTHTDAQWKENSE 165
               AL AV  AI++LK   PIWKKE Y  G H DA+WKENSE
Sbjct:   103 SAALKAVTFAIDQLKSRVPIWKKELYE-GNH-DAEWKENSE 141

GO:0005829 "cytosol" evidence=ISS

GO:0006777 "Mo-molybdopterin cofactor biosynthetic process" evidence=ISS

GO:0030366 "Mo-molybdopterin synthase activity" evidence=ISS

UNIPROTKB|Q297G3 GA10181 "Molybdopterin synthase catalytic subunit" [Drosophila pseudoobscura pseudoobscura (taxid:46245)]

 Score = 262 (97.3 bits), Expect = 1.3e-22, P = 1.3e-22
 Identities = 53/101 (52%), Positives = 64/101 (63%)

Query:    65 RVVSLHYEAYKSMALKVFKDICNNLRETWPDIVNVAIYHRLGNXXXXXXXXXXXXXXXHR 124
             +VVSL YEAY++MALK    IC++LR TWPD+ ++ IYHRLG                HR
Sbjct:    43 KVVSLAYEAYENMALKEMDKICSDLRATWPDLKHILIYHRLGTVPENEASVVIAASAPHR 102

Query:   125 QTALSAVEHAINKLKEMAPIWKKEEYAPGTHTDAQWKENSE 165
               AL AV  AI++LK   PIWKKE Y  G H DA+WKENSE
Sbjct:   103 SAALKAVTFAIDQLKSRVPIWKKEIYE-GNH-DAEWKENSE 141

GO:0005829 "cytosol" evidence=ISS

GO:0006777 "Mo-molybdopterin cofactor biosynthetic process" evidence=ISS

GO:0030366 "Mo-molybdopterin synthase activity" evidence=ISS

UNIPROTKB|B4JHP4 GH19575 "Molybdopterin synthase catalytic subunit" [Drosophila grimshawi (taxid:7222)]

 Score = 249 (92.7 bits), Expect = 3.0e-21, P = 3.0e-21
 Identities = 47/104 (45%), Positives = 59/104 (56%)

Query:    65 RVVSLHYEAYKSMALKVFKDICNNLRETWPDIVNVAIYHRLGNXXXXXXXXXXXXXXXHR 124
             +V+SL YE+Y+ MALK    IC+ LR  WPD+ ++AIYHRLG                HR
Sbjct:    43 KVISLEYESYEKMALKEMSKICSQLRARWPDLKHIAIYHRLGTVPVKEASVVIATSAPHR 102

Query:   125 QTALSAVEHAINKLKEMAPIWKKEEYAPGTHTDAQWKENSECMW 168
               AL +V  A+ +LK   PIWKKE Y     T  +WKEN EC W
Sbjct:   103 AAALESVTFAVEQLKSRVPIWKKEIYE--NDTIGEWKENMECPW 144

GO:0005829 "cytosol" evidence=ISS

GO:0006777 "Mo-molybdopterin cofactor biosynthetic process" evidence=ISS

GO:0030366 "Mo-molybdopterin synthase activity" evidence=ISS

UNIPROTKB|B4PUD1 GE10737 "Molybdopterin synthase catalytic subunit" [Drosophila yakuba (taxid:7245)]

 Score = 241 (89.9 bits), Expect = 2.6e-20, P = 2.6e-20
 Identities = 49/101 (48%), Positives = 61/101 (60%)

Query:    65 RVVSLHYEAYKSMALKVFKDICNNLRETWPDIVNVAIYHRLGNXXXXXXXXXXXXXXXHR 124
             +VVSL YEAY SMALK    IC++LR  WPD+ ++ IYHRLG                HR
Sbjct:    43 KVVSLAYEAYDSMALKEMNKICSDLRSKWPDLKHIVIYHRLGTVPVCEASVVIAASSPHR 102

Query:   125 QTALSAVEHAINKLKEMAPIWKKEEYAPGTHTDAQWKENSE 165
               AL +V  AI++LK   PIWKKE Y  G + D++WKEN E
Sbjct:   103 SEALESVSFAIDQLKTRVPIWKKEIYE-GDY-DSEWKENKE 141

GO:0005829 "cytosol" evidence=ISS

GO:0006777 "Mo-molybdopterin cofactor biosynthetic process" evidence=ISS

GO:0030366 "Mo-molybdopterin synthase activity" evidence=ISS

UNIPROTKB|B4NJW0 GK13883 "Molybdopterin synthase catalytic subunit" [Drosophila willistoni (taxid:7260)]

 Score = 241 (89.9 bits), Expect = 2.9e-20, P = 2.9e-20
 Identities = 50/108 (46%), Positives = 65/108 (60%)

Query:    65 RVVSLHYEAYKSMALKVFKDICNNLRETWPDIVNVAIYHRLGNXXXXXXXXXXXXXXXHR 124
             +V+SL YEAY+ MA+K  K IC +LR  WPD+ ++ IYHRLG+               HR
Sbjct:    43 KVLSLEYEAYEPMAIKEMKTICTDLRAKWPDLKHIVIYHRLGSVPVGEASVVIATSAPHR 102

Query:   125 QTALSAVEHAINKLKEMAPIWKKEEYAPGTHTDAQWKENSECMWRVKH 172
              +AL +V  A+++LK   PIWKKE Y  G    AQWKEN E + R KH
Sbjct:   103 LSALESVSLAVDQLKTRVPIWKKELYE-GDDP-AQWKENKESL-RPKH 147

GO:0005829 "cytosol" evidence=ISS

GO:0006777 "Mo-molybdopterin cofactor biosynthetic process" evidence=ISS

GO:0030366 "Mo-molybdopterin synthase activity" evidence=ISS

UNIPROTKB|B4KBH3 GI23778 "Molybdopterin synthase catalytic subunit" [Drosophila mojavensis (taxid:7230)]

 Score = 239 (89.2 bits), Expect = 4.4e-20, P = 4.4e-20
 Identities = 47/104 (45%), Positives = 59/104 (56%)

Query:    65 RVVSLHYEAYKSMALKVFKDICNNLRETWPDIVNVAIYHRLGNXXXXXXXXXXXXXXXHR 124
             +V+SL YEAY+SMALK    IC+ LR  WP + ++AIYHRLG+               HR
Sbjct:    43 KVISLEYEAYESMALKEMGKICSELRIRWPTLKHIAIYHRLGSVPVAEESVVIAVSAPHR 102

Query:   125 QTALSAVEHAINKLKEMAPIWKKEEYAPGTHTDAQWKENSECMW 168
               AL +V  A++KLK   PIWKKE Y        +WK N EC W
Sbjct:   103 PAALESVSFAVDKLKSSVPIWKKEIYE--NDQIGEWKANMECPW 144

GO:0005829 "cytosol" evidence=ISS

GO:0006777 "Mo-molybdopterin cofactor biosynthetic process" evidence=ISS

GO:0030366 "Mo-molybdopterin synthase activity" evidence=ISS

UNIPROTKB|B3P6R5 GG12284 "Molybdopterin synthase catalytic subunit" [Drosophila erecta (taxid:7220)]

 Score = 237 (88.5 bits), Expect = 7.7e-20, P = 7.7e-20
 Identities = 49/101 (48%), Positives = 59/101 (58%)

Query:    65 RVVSLHYEAYKSMALKVFKDICNNLRETWPDIVNVAIYHRLGNXXXXXXXXXXXXXXXHR 124
             +VVSL YEAY SMALK    IC +LR  WPD+ ++ IYHRLG                HR
Sbjct:    43 KVVSLAYEAYDSMALKEMNKICLDLRSKWPDLKHIVIYHRLGTVPVCEASVVIAASSPHR 102

Query:   125 QTALSAVEHAINKLKEMAPIWKKEEYAPGTHTDAQWKENSE 165
               AL +V  AI++LK   PIWKKE Y  G H  ++WKEN E
Sbjct:   103 SEALESVSFAIDQLKTRVPIWKKEIYE-GDHV-SEWKENKE 141

GO:0005829 "cytosol" evidence=ISS

GO:0006777 "Mo-molybdopterin cofactor biosynthetic process" evidence=ISS

GO:0030366 "Mo-molybdopterin synthase activity" evidence=ISS

UNIPROTKB|F1N8S9 MOCS2 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 232 (86.7 bits), Expect = 1.9e-19, P = 1.9e-19
 Identities = 44/104 (42%), Positives = 57/104 (54%)

Query:    65 RVVSLHYEAYKSMALKVFKDICNNLRETWPDIVNVAIYHRLGNXXXXXXXXXXXXXXXHR 124
             +V+ L YEAY SMA    K IC ++R+ WP + ++A++HRLG                HR
Sbjct:    85 KVIHLEYEAYTSMAEMEIKKICRDVRQKWPSVKHIALHHRLGVVPVTEASVIIAVSSPHR 144

Query:   125 QTALSAVEHAINKLKEMAPIWKKEEYAPGTHTDAQWKENSECMW 168
               +L AV H IN LK + PIWKKE Y      +  WKEN EC W
Sbjct:   145 AESLEAVTHCINTLKAIVPIWKKEIY----EDEYSWKENKECFW 184

GO:0005634 "nucleus" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0019008 "molybdopterin synthase complex" evidence=IEA

GO:0030366 "Mo-molybdopterin synthase activity" evidence=IEA

GO:0042802 "identical protein binding" evidence=IEA

UNIPROTKB|B3M268 GF17098 "Molybdopterin synthase catalytic subunit" [Drosophila ananassae (taxid:7217)]

 Score = 231 (86.4 bits), Expect = 3.6e-19, P = 3.6e-19
 Identities = 48/107 (44%), Positives = 63/107 (58%)

Query:    65 RVVSLHYEAYKSMALKVFKDICNNLRETWPDIVNVAIYHRLGNXXXXXXXXXXXXXXXHR 124
             +VVSL YEAY +MA+K    IC++LR  WP + ++ I+HRLG                HR
Sbjct:    43 KVVSLAYEAYDNMAIKEMNKICSDLRSKWPGLKHIVIHHRLGTVPVREASVVIAASSPHR 102

Query:   125 QTALSAVEHAINKLKEMAPIWKKEEYAPGTHTDAQWKENSECMWRVK 171
               AL +V  AI++LK   PIWKKE Y  G H +A+WKEN E + R K
Sbjct:   103 SEALESVSFAIDQLKTRVPIWKKEIYE-GDH-EAEWKENKESI-RAK 146

GO:0005829 "cytosol" evidence=ISS

GO:0006777 "Mo-molybdopterin cofactor biosynthetic process" evidence=ISS

GO:0030366 "Mo-molybdopterin synthase activity" evidence=ISS

RGD|1359477 Mocs2 "molybdenum cofactor synthesis 2" [Rattus norvegicus (taxid:10116)]

 Score = 227 (85.0 bits), Expect = 6.5e-19, P = 6.5e-19
 Identities = 43/104 (41%), Positives = 58/104 (55%)

Query:    65 RVVSLHYEAYKSMALKVFKDICNNLRETWPDIVNVAIYHRLGNXXXXXXXXXXXXXXXHR 124
             +V+SL YEAY  MA    + ICN++R+ WP + ++A++HRLG                HR
Sbjct:    97 KVISLEYEAYLPMAENEIRKICNDIRQKWP-VRHIAVFHRLGLVPVSEASTVIAVSSAHR 155

Query:   125 QTALSAVEHAINKLKEMAPIWKKEEYAPGTHTDAQWKENSECMW 168
               +L AV +AI+ LK   PIWKKE Y   T   + WK N EC W
Sbjct:   156 AASLEAVSYAIDSLKAKVPIWKKEIYEEST---SSWKRNKECFW 196

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0005634 "nucleus" evidence=IEA;ISO

GO:0005737 "cytoplasm" evidence=ISO

GO:0005829 "cytosol" evidence=ISO;ISS

GO:0006777 "Mo-molybdopterin cofactor biosynthetic process" evidence=IEA;ISO;ISS

GO:0008150 "biological_process" evidence=ND

GO:0016740 "transferase activity" evidence=IEA

GO:0019008 "molybdopterin synthase complex" evidence=IEA;ISO

GO:0030366 "Mo-molybdopterin synthase activity" evidence=ISO;ISS

GO:0042802 "identical protein binding" evidence=IEA;ISO

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q297G3	MOC2B_DROPS	2, ., 8, ., 1, ., 1, 2	0.6336	0.5755	0.2742	yes	N/A
Q7QAD7	MOC2B_ANOGA	2, ., 8, ., 1, ., 1, 2	0.5514	0.6104	0.6818	yes	N/A
Q6AY59	MOC2B_RAT	2, ., 8, ., 1, ., 1, 2	0.5288	0.5813	0.5	yes	N/A
O22827	MOC2B_ARATH	2, ., 8, ., 1, ., 1, 2	0.5098	0.5639	0.4898	yes	N/A
Q9VBX2	MOC2B_DROME	2, ., 8, ., 1, ., 1, 2	0.5841	0.5755	0.2697	yes	N/A
Q9Z223	MOC2B_MOUSE	2, ., 8, ., 1, ., 1, 2	0.5288	0.5813	0.5291	yes	N/A
B5FXU9	MOC2B_TAEGU	2, ., 8, ., 1, ., 1, 2	0.5192	0.5813	0.6451	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	172
cd00756	124	cd00756, MoaE, MoaE family	4e-32
PLN02390	111	PLN02390, PLN02390, molybdopterin synthase catalyt	6e-31
COG0314	149	COG0314, MoaE, Molybdopterin converting factor, la	2e-28
pfam02391	117	pfam02391, MoaE, MoaE protein	6e-23
PLN02390	111	PLN02390, PLN02390, molybdopterin synthase catalyt	1e-15
cd00756	124	cd00756, MoaE, MoaE family	3e-15
PRK14493	274	PRK14493, PRK14493, putative bifunctional molybdop	4e-15
COG0314	149	COG0314, MoaE, Molybdopterin converting factor, la	1e-11
PRK10678	150	PRK10678, moaE, molybdopterin guanine dinucleotide	1e-10
pfam02391	117	pfam02391, MoaE, MoaE protein	2e-07
PRK14493	274	PRK14493, PRK14493, putative bifunctional molybdop	2e-07
PRK10678	150	PRK10678, moaE, molybdopterin guanine dinucleotide	0.004

>gnl|CDD|238385 cd00756, MoaE, MoaE family

 Score =  111 bits (279), Expect = 4e-32
 Identities = 43/97 (44%), Positives = 58/97 (59%), Gaps = 5/97 (5%)

Query: 65  RVVSLHYEAYKSMALKVFKDICNNLRETWPDIVNVAIYHRLGNVPVSEASVVIAISSPHR 124
            V +L YEAY  MA K  ++I    RE W  ++ VAI HR+G +P  EA V++A+SSPHR
Sbjct: 33  GVEALEYEAYPPMAEKELEEIAEEARERWG-LLRVAIIHRVGRLPPGEAIVLVAVSSPHR 91

Query: 125 QTALSAVEHAINKLKEMAPIWKKEEYAPGTHTDAQWK 161
           + A  A E  I++LK  APIWKKE +        +W 
Sbjct: 92  KEAFEACEFLIDRLKHRAPIWKKEIFE----GGEEWV 124

Members of this family are involved in biosynthesis of the molybdenum cofactor (Moco), an essential cofactor for a diverse group of redox enzymes. Moco biosynthesis is an evolutionarily conserved pathway present in eubacteria, archaea and eukaryotes. Moco contains a tricyclic pyranopterin, termed molybdopterin (MPT), which carries the cis-dithiolene group responsible for molybdenum ligation. This dithiolene group is generated by MPT synthase in the second major step in Moco biosynthesis. MPT synthase is a heterotetramer consisting of two large (MoaE) and two small (MoaD) subunits. Length = 124

>gnl|CDD|178014 PLN02390, PLN02390, molybdopterin synthase catalytic subunit

 Score =  107 bits (270), Expect = 6e-31
 Identities = 43/89 (48%), Positives = 55/89 (61%), Gaps = 1/89 (1%)

Query: 65  RVVSLHYEAYKSMALKVFKDICNNLRETWPDIVNVAIYHRLGNVPVSEASVVIAISSPHR 124
            V+ L YEAY  MAL+  + IC+  R  W  +  +A+ HRLG VPV E SV +A+SS HR
Sbjct: 22  TVLELRYEAYVPMALRELRKICDEARSRW-SLHKIAVAHRLGPVPVGETSVFVAVSSVHR 80

Query: 125 QTALSAVEHAINKLKEMAPIWKKEEYAPG 153
             AL A +  I++LK   PIWKKE Y  G
Sbjct: 81  ADALDACKFLIDELKASVPIWKKEVYDDG 109

Length = 111

>gnl|CDD|223391 COG0314, MoaE, Molybdopterin converting factor, large subunit [Coenzyme metabolism]

 Score =  102 bits (256), Expect = 2e-28
 Identities = 39/91 (42%), Positives = 56/91 (61%), Gaps = 1/91 (1%)

Query: 65  RVVSLHYEAYKSMALKVFKDICNNLRETWPDIVNVAIYHRLGNVPVSEASVVIAISSPHR 124
           RV +L YEAY  MA K  ++I    +E W  ++ VAI HR+G + + EA V++ ++S HR
Sbjct: 46  RVEALEYEAYPEMAEKELEEIAAEAKEKWG-LLRVAIIHRIGELKIGEAIVLVGVASAHR 104

Query: 125 QTALSAVEHAINKLKEMAPIWKKEEYAPGTH 155
           + A  A E+ I++LK  APIWKKE    G  
Sbjct: 105 KEAFEACEYIIDRLKHRAPIWKKEHTEDGER 135

Length = 149

>gnl|CDD|111299 pfam02391, MoaE, MoaE protein

 Score = 87.3 bits (217), Expect = 6e-23
 Identities = 37/76 (48%), Positives = 52/76 (68%), Gaps = 1/76 (1%)

Query: 65  RVVSLHYEAYKSMALKVFKDICNNLRETWPDIVNVAIYHRLGNVPVSEASVVIAISSPHR 124
           RV  L YEAY  MA K   +I    RE WP  ++VA+ HRLG + + EA+V+IA+S+PHR
Sbjct: 41  RVSRLEYEAYPEMAEKELAEIVEEAREKWP-GIDVAVVHRLGELQIGEAAVLIAVSAPHR 99

Query: 125 QTALSAVEHAINKLKE 140
           + A  A E+AI++LK+
Sbjct: 100 KEAFEACEYAIDELKK 115

This family contains the MoaE protein that is involved in biosynthesis of molybdopterin. Molybdopterin, the universal component of the pterin molybdenum cofactors, contains a dithiolene group serving to bind Mo. Addition of the dithiolene sulfurs to a molybdopterin precursor requires the activity of the converting factor. Converting factor contains the MoaE and MoaD proteins. Length = 117

>gnl|CDD|178014 PLN02390, PLN02390, molybdopterin synthase catalytic subunit

 Score = 68.9 bits (169), Expect = 1e-15
 Identities = 27/49 (55%), Positives = 32/49 (65%)

Query: 1   LGNVPVSEASVVIAISSPHRQTALSAVEHAINKLKEMAPIWKKEEYAPG 49
           LG VPV E SV +A+SS HR  AL A +  I++LK   PIWKKE Y  G
Sbjct: 61  LGPVPVGETSVFVAVSSVHRADALDACKFLIDELKASVPIWKKEVYDDG 109

Length = 111

>gnl|CDD|238385 cd00756, MoaE, MoaE family

 Score = 67.9 bits (167), Expect = 3e-15
 Identities = 25/57 (43%), Positives = 35/57 (61%), Gaps = 4/57 (7%)

Query: 1   LGNVPVSEASVVIAISSPHRQTALSAVEHAINKLKEMAPIWKKEEYAPGTHTDAQWK 57
           +G +P  EA V++A+SSPHR+ A  A E  I++LK  APIWKKE +        +W 
Sbjct: 72  VGRLPPGEAIVLVAVSSPHRKEAFEACEFLIDRLKHRAPIWKKEIFE----GGEEWV 124

Members of this family are involved in biosynthesis of the molybdenum cofactor (Moco), an essential cofactor for a diverse group of redox enzymes. Moco biosynthesis is an evolutionarily conserved pathway present in eubacteria, archaea and eukaryotes. Moco contains a tricyclic pyranopterin, termed molybdopterin (MPT), which carries the cis-dithiolene group responsible for molybdenum ligation. This dithiolene group is generated by MPT synthase in the second major step in Moco biosynthesis. MPT synthase is a heterotetramer consisting of two large (MoaE) and two small (MoaD) subunits. Length = 124

>gnl|CDD|237730 PRK14493, PRK14493, putative bifunctional molybdopterin-guanine dinucleotide biosynthesis protein MobB/MoaE; Provisional

 Score = 70.4 bits (173), Expect = 4e-15
 Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 1/84 (1%)

Query: 65  RVVSLHYEAYKSMALKVFKDICNNLRETWPDIVNVAIYHRLGNVPVSEASVVIAISSPHR 124
               L +E Y  +A +    I   L++    +  V ++HR G +   E  V + + + HR
Sbjct: 179 PTEYLEFEKYDGVADERMAAIREELKQR-DGVFEVLLHHRTGVIEAGEDIVFVVVLAGHR 237

Query: 125 QTALSAVEHAINKLKEMAPIWKKE 148
           Q A  AV   I++LK+  PI+KKE
Sbjct: 238 QEAFRAVSDGIDRLKDEVPIFKKE 261

Length = 274

>gnl|CDD|223391 COG0314, MoaE, Molybdopterin converting factor, large subunit [Coenzyme metabolism]

 Score = 59.2 bits (144), Expect = 1e-11
 Identities = 21/51 (41%), Positives = 32/51 (62%)

Query: 1   LGNVPVSEASVVIAISSPHRQTALSAVEHAINKLKEMAPIWKKEEYAPGTH 51
           +G + + EA V++ ++S HR+ A  A E+ I++LK  APIWKKE    G  
Sbjct: 85  IGELKIGEAIVLVGVASAHRKEAFEACEYIIDRLKHRAPIWKKEHTEDGER 135

Length = 149

>gnl|CDD|182642 PRK10678, moaE, molybdopterin guanine dinucleotide biosynthesis protein MoaE; Provisional

 Score = 56.7 bits (137), Expect = 1e-10
 Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 1/89 (1%)

Query: 65  RVVSLHYEAYKSMALKVFKDICNNLRETWPDIVNVAIYHRLGNVPVSEASVVIAISSPHR 124
            V +L  E Y  M  K   +I +  R  WP +  V + HR+G +   +  V + ++S HR
Sbjct: 46  SVKALTLEHYPGMTEKALAEIVDEARSRWP-LGRVTVIHRVGELWPGDEIVFVGVTSAHR 104

Query: 125 QTALSAVEHAINKLKEMAPIWKKEEYAPG 153
            +A  A +  ++ LK  AP WK+E    G
Sbjct: 105 SSAFEAGQFIMDYLKTRAPFWKREATPEG 133

Length = 150

>gnl|CDD|111299 pfam02391, MoaE, MoaE protein

 Score = 47.3 bits (113), Expect = 2e-07
 Identities = 18/36 (50%), Positives = 29/36 (80%)

Query: 1   LGNVPVSEASVVIAISSPHRQTALSAVEHAINKLKE 36
           LG + + EA+V+IA+S+PHR+ A  A E+AI++LK+
Sbjct: 80  LGELQIGEAAVLIAVSAPHRKEAFEACEYAIDELKK 115

This family contains the MoaE protein that is involved in biosynthesis of molybdopterin. Molybdopterin, the universal component of the pterin molybdenum cofactors, contains a dithiolene group serving to bind Mo. Addition of the dithiolene sulfurs to a molybdopterin precursor requires the activity of the converting factor. Converting factor contains the MoaE and MoaD proteins. Length = 117

>gnl|CDD|237730 PRK14493, PRK14493, putative bifunctional molybdopterin-guanine dinucleotide biosynthesis protein MobB/MoaE; Provisional

 Score = 49.2 bits (118), Expect = 2e-07
 Identities = 17/43 (39%), Positives = 25/43 (58%)

Query: 2   GNVPVSEASVVIAISSPHRQTALSAVEHAINKLKEMAPIWKKE 44
           G +   E  V + + + HRQ A  AV   I++LK+  PI+KKE
Sbjct: 219 GVIEAGEDIVFVVVLAGHRQEAFRAVSDGIDRLKDEVPIFKKE 261

Length = 274

>gnl|CDD|182642 PRK10678, moaE, molybdopterin guanine dinucleotide biosynthesis protein MoaE; Provisional

 Score = 35.9 bits (83), Expect = 0.004
 Identities = 14/39 (35%), Positives = 22/39 (56%)

Query: 11  VVIAISSPHRQTALSAVEHAINKLKEMAPIWKKEEYAPG 49
           V + ++S HR +A  A +  ++ LK  AP WK+E    G
Sbjct: 95  VFVGVTSAHRSSAFEAGQFIMDYLKTRAPFWKREATPEG 133

Length = 150

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	172
PRK10678	150	moaE molybdopterin guanine dinucleotide biosynthes	100.0
PLN02390	111	molybdopterin synthase catalytic subunit	100.0
COG0314	149	MoaE Molybdopterin converting factor, large subuni	100.0
cd00756	124	MoaE MoaE family. Members of this family are invol	100.0
KOG3307|consensus	150		100.0
PRK14493	274	putative bifunctional molybdopterin-guanine dinucl	100.0
PF02391	117	MoaE: MoaE protein; InterPro: IPR003448 This famil	99.97
PLN02390	111	molybdopterin synthase catalytic subunit	99.75
PRK10678	150	moaE molybdopterin guanine dinucleotide biosynthes	99.75
COG0314	149	MoaE Molybdopterin converting factor, large subuni	99.73
cd00756	124	MoaE MoaE family. Members of this family are invol	99.73
KOG3307|consensus	150		99.63
PRK11538	105	ribosome-associated protein; Provisional	83.6

>PRK10678 moaE molybdopterin guanine dinucleotide biosynthesis protein MoaE; Provisional

Probab=100.00  E-value=6.6e-41  Score=262.98  Aligned_cols=113  Identities=28%  Similarity=0.488  Sum_probs=107.7

Q ss_pred             CccccccccccccccceeeEEEEeeChhHHHHHHHHHHHHHHhhCCCccEEEEEEeeeccCCCCeEEEEEeeCcchHHHH
Q psy11503         49 GTHTDAQWKENSECMWRVVSLHYEAYKSMALKVFKDICNNLRETWPDIVNVAIYHRLGNVPVSEASVVIAISSPHRQTAL  128 (172)
Q Consensus        49 G~~~~~~wv~nse~G~~V~~L~ye~y~~ma~~~l~~I~~e~~~~~~gi~~v~i~Hr~G~l~vGe~~v~Vavas~hR~~af  128 (172)
                      +..+|.|+||+.++|++|++|+||+|++||++.|++|++++.++|| +.++.|+||+|.|+|||++|+|+|+|+||++||
T Consensus        30 Aiv~F~G~VR~~~~g~~V~~L~yeay~~ma~k~l~~I~~ea~~~~~-~~~v~i~HR~G~l~~Ge~~v~Vav~s~HR~~Af  108 (150)
T PRK10678         30 AVVTFTGKVRNHNLGDSVKALTLEHYPGMTEKALAEIVDEARSRWP-LGRVTVIHRVGELWPGDEIVFVGVTSAHRSSAF  108 (150)
T ss_pred             eEEEEEEEECCCCCCCceeEEEEEecCcHHHHHHHHHHHHHHHhCC-CCcEEEEEeEecccCCCEEEEEEEECCCHHHHH
Confidence            4556899999999999999999999999999999999999999997 999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhhCcceeeeecCCCccccccccccccc
Q psy11503        129 SAVEHAINKLKEMAPIWKKEEYAPGTHTDAQWKENSEC  166 (172)
Q Consensus       129 ~A~~~~id~lK~~vpiWKkE~~~dg~~~~~~W~~~~~~  166 (172)
                      +||+++||+||+++||||||++.||+    .|+++++.
T Consensus       109 ~A~~~~id~lK~~vPIWKkE~~~dG~----~Wv~~~~~  142 (150)
T PRK10678        109 EAGQFIMDYLKTRAPFWKREATPEGD----RWVEARDS  142 (150)
T ss_pred             HHHHHHHHHHhhcCCeEEeEEcCCCC----EEecCCcc
Confidence            99999999999999999999999996    89987654

>PLN02390 molybdopterin synthase catalytic subunit

Probab=100.00  E-value=1.1e-40  Score=250.15  Aligned_cols=105  Identities=42%  Similarity=0.673  Sum_probs=101.2

Q ss_pred             CccccccccccccccceeeEEEEeeChhHHHHHHHHHHHHHHhhCCCccEEEEEEeeeccCCCCeEEEEEeeCcchHHHH
Q psy11503         49 GTHTDAQWKENSECMWRVVSLHYEAYKSMALKVFKDICNNLRETWPDIVNVAIYHRLGNVPVSEASVVIAISSPHRQTAL  128 (172)
Q Consensus        49 G~~~~~~wv~nse~G~~V~~L~ye~y~~ma~~~l~~I~~e~~~~~~gi~~v~i~Hr~G~l~vGe~~v~Vavas~hR~~af  128 (172)
                      +..+|.|.||+..+|++|++|+||+|+|||++.|++|+++++++|| +.++.|+||+|.|+|||++++|+|+|+||++||
T Consensus         6 Aiv~F~G~VR~~~~g~~V~~L~yeay~~ma~~~l~~I~~e~~~~~~-~~~v~i~HR~G~l~vge~~v~v~v~s~HR~~Af   84 (111)
T PLN02390          6 AIATFSGTTRDTFEGKTVLELRYEAYVPMALRELRKICDEARSRWS-LHKIAVAHRLGPVPVGETSVFVAVSSVHRADAL   84 (111)
T ss_pred             EEEEEEEEECCCCCCCcEeeEEEEEcHHHHHHHHHHHHHHHHHhCC-CceEEEEEeeecccCCCEEEEEEEECCCHHHHH
Confidence            3456889999988999999999999999999999999999999996 999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhhCcceeeeecCCCc
Q psy11503        129 SAVEHAINKLKEMAPIWKKEEYAPGT  154 (172)
Q Consensus       129 ~A~~~~id~lK~~vpiWKkE~~~dg~  154 (172)
                      +||+++||+||+++||||||+|+||+
T Consensus        85 ~A~~~~id~lK~~vPIWKkE~~~dG~  110 (111)
T PLN02390         85 DACKFLIDELKASVPIWKKEVYDDGE  110 (111)
T ss_pred             HHHHHHHHHHhhcCCEEEeeecCCCC
Confidence            99999999999999999999999996

>COG0314 MoaE Molybdopterin converting factor, large subunit [Coenzyme metabolism]

Probab=100.00  E-value=2.2e-40  Score=259.74  Aligned_cols=128  Identities=37%  Similarity=0.565  Sum_probs=114.9

Q ss_pred             HHHHHHhhhcCCcccccccCCCccccccccccccccceeeEEEEeeChhHHHHHHHHHHHHHHhhCCCccEEEEEEeeec
Q psy11503         28 EHAINKLKEMAPIWKKEEYAPGTHTDAQWKENSECMWRVVSLHYEAYKSMALKVFKDICNNLRETWPDIVNVAIYHRLGN  107 (172)
Q Consensus        28 ~~lId~lK~~~PIwKke~~~~G~~~~~~wv~nse~G~~V~~L~ye~y~~ma~~~l~~I~~e~~~~~~gi~~v~i~Hr~G~  107 (172)
                      ..+++.+.+..     +++  +.++|.|+||+..+|.+|++|+||+|++||++.|.+|+++++++|| +.++.++||+|.
T Consensus        16 ~~~i~~~~~~~-----~~G--AivtF~G~VR~~~~G~~v~~L~yEaY~~ma~k~l~~I~~e~~~k~~-~~~v~i~HriG~   87 (149)
T COG0314          16 EELIEALSEPS-----EAG--AIVTFVGIVREENDGRRVEALEYEAYPEMAEKELEEIAAEAKEKWG-LLRVAIIHRIGE   87 (149)
T ss_pred             HHHHHHHhCcc-----cCc--eEEEEEEEEecCCCCceeeeEEEecCHHHHHHHHHHHHHHHHHhCC-ceeEEEEEeecc
Confidence            34555555544     233  4556889999999999999999999999999999999999999997 899999999999


Q ss_pred             cCCCCeEEEEEeeCcchHHHHHHHHHHHHHHhhhCcceeeeecCCCcccccccccccccc
Q psy11503        108 VPVSEASVVIAISSPHRQTALSAVEHAINKLKEMAPIWKKEEYAPGTHTDAQWKENSECM  167 (172)
Q Consensus       108 l~vGe~~v~Vavas~hR~~af~A~~~~id~lK~~vpiWKkE~~~dg~~~~~~W~~~~~~~  167 (172)
                      |.|||++|+|+|+|+||++||+||+|+||+||+++||||+|++.||+    .|+.+.+.+
T Consensus        88 l~~Ge~~v~v~v~s~HR~~Af~a~~~~id~lK~~aPiWKkE~~~dg~----~Wv~~~~~~  143 (149)
T COG0314          88 LKIGEAIVLVGVASAHRKEAFEACEYIIDRLKHRAPIWKKEHTEDGE----RWVGDREHD  143 (149)
T ss_pred             ccCCCcEEEEEEecccHHHHHHHHHHHHHHHHhhCCceEEEecCCCC----eEEeccccc
Confidence            99999999999999999999999999999999999999999999998    699877654

>cd00756 MoaE MoaE family

Probab=100.00  E-value=1.4e-39  Score=248.37  Aligned_cols=108  Identities=42%  Similarity=0.670  Sum_probs=102.9

Q ss_pred             CccccccccccccccceeeEEEEeeChhHHHHHHHHHHHHHHhhCCCccEEEEEEeeeccCCCCeEEEEEeeCcchHHHH
Q psy11503         49 GTHTDAQWKENSECMWRVVSLHYEAYKSMALKVFKDICNNLRETWPDIVNVAIYHRLGNVPVSEASVVIAISSPHRQTAL  128 (172)
Q Consensus        49 G~~~~~~wv~nse~G~~V~~L~ye~y~~ma~~~l~~I~~e~~~~~~gi~~v~i~Hr~G~l~vGe~~v~Vavas~hR~~af  128 (172)
                      +..+|.|.||+...|++|++|+||+|++||++.|++|+++++++|+ +.++.++||+|.|+|||++++|+|+|+||++||
T Consensus        17 Aiv~F~G~VR~~~~~~~v~~L~ye~y~~ma~~~l~~I~~e~~~k~~-~~~v~v~HR~G~l~vGe~~v~i~v~a~hR~~af   95 (124)
T cd00756          17 AVVTFVGTVRDHDEGKGVEALEYEAYPPMAEKELEEIAEEARERWG-LLRVAIIHRVGRLPPGEAIVLVAVSSPHRKEAF   95 (124)
T ss_pred             EEEEEEEEECCCCCCCcEeEEEEEECchHHHHHHHHHHHHHHHhCC-CceEEEEEEEcccCCCCEEEEEEEecCCHHHHH
Confidence            3445789999988899999999999999999999999999999996 999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhhCcceeeeecCCCcccccccc
Q psy11503        129 SAVEHAINKLKEMAPIWKKEEYAPGTHTDAQWK  161 (172)
Q Consensus       129 ~A~~~~id~lK~~vpiWKkE~~~dg~~~~~~W~  161 (172)
                      +||+++||+||+++||||+|+|.||+    .|+
T Consensus        96 ~A~~~~id~lK~~~PiWKkE~~~~~~----~Wv  124 (124)
T cd00756          96 EACEFLIDRLKHRAPIWKKEIFEGGE----EWV  124 (124)
T ss_pred             HHHHHHHHHHHhhCCEEEEEEeCCCC----EEC
Confidence            99999999999999999999999886    785

Members of this family are involved in biosynthesis of the molybdenum cofactor (Moco), an essential cofactor for a diverse group of redox enzymes. Moco biosynthesis is an evolutionarily conserved pathway present in eubacteria, archaea and eukaryotes. Moco contains a tricyclic pyranopterin, termed molybdopterin (MPT), which carries the cis-dithiolene group responsible for molybdenum ligation. This dithiolene group is generated by MPT synthase in the second major step in Moco biosynthesis. MPT synthase is a heterotetramer consisting of two large (MoaE) and two small (MoaD) subunits.

>KOG3307|consensus

Probab=100.00  E-value=1.4e-36  Score=230.34  Aligned_cols=113  Identities=47%  Similarity=0.751  Sum_probs=109.4

Q ss_pred             ccccccccccccceeeEEEEeeChhHHHHHHHHHHHHHHhhCCCccEEEEEEeeeccCCCCeEEEEEeeCcchHHHHHHH
Q psy11503         52 TDAQWKENSECMWRVVSLHYEAYKSMALKVFKDICNNLRETWPDIVNVAIYHRLGNVPVSEASVVIAISSPHRQTALSAV  131 (172)
Q Consensus        52 ~~~~wv~nse~G~~V~~L~ye~y~~ma~~~l~~I~~e~~~~~~gi~~v~i~Hr~G~l~vGe~~v~Vavas~hR~~af~A~  131 (172)
                      +|.|.+||.+.|++|..|+||+|.|||.+.|+.||.+++++|| +..+.+.||+|.+++||.+|+|+|+|+||..+++||
T Consensus        35 tF~GtTRdnfeGk~V~~L~Yeay~pMA~~~lr~IC~~iR~~wp-vkkIAvfHRLG~VpvgEsSviIavSS~HRa~~l~A~  113 (150)
T KOG3307|consen   35 TFNGTTRDNFEGKDVSNLSYEAYDPMAYKKLRGICAEIRAEWP-VKKIAVFHRLGKVPVGESSVIIAVSSPHRATALQAT  113 (150)
T ss_pred             eeccccccccCCceeeeeehhhhcHHHHHHHHHHHHHHHhhCc-hhhhhhhhhccCcccCcceEEEEecChhhHHHHHHH
Confidence            4679999999999999999999999999999999999999999 999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhhCcceeeeecCCCcccccccccccccccc
Q psy11503        132 EHAINKLKEMAPIWKKEEYAPGTHTDAQWKENSECMWR  169 (172)
Q Consensus       132 ~~~id~lK~~vpiWKkE~~~dg~~~~~~W~~~~~~~~~  169 (172)
                      +++||.||..+||||||.|+.++    .|++|.+++|.
T Consensus       114 ~~~ID~LKa~vPIwKkE~Ye~~~----vWK~N~E~~~~  147 (150)
T KOG3307|consen  114 EKCIDLLKAHVPIWKKEEYEVDG----VWKSNIEDSKQ  147 (150)
T ss_pred             HHHHHHHHhcCCcccceeeecCc----cccccHHHHHh
Confidence            99999999999999999999886    99999999875

>PRK14493 putative bifunctional molybdopterin-guanine dinucleotide biosynthesis protein MobB/MoaE; Provisional

Probab=100.00  E-value=1.7e-34  Score=245.76  Aligned_cols=110  Identities=25%  Similarity=0.341  Sum_probs=104.0

Q ss_pred             ccccccccc--cccccceeeEEEEeeChhHHHHHHHHHHHHHHhhCCCccEEEEEEeeeccCCCCeEEEEEeeCcchHHH
Q psy11503         50 THTDAQWKE--NSECMWRVVSLHYEAYKSMALKVFKDICNNLRETWPDIVNVAIYHRLGNVPVSEASVVIAISSPHRQTA  127 (172)
Q Consensus        50 ~~~~~~wv~--nse~G~~V~~L~ye~y~~ma~~~l~~I~~e~~~~~~gi~~v~i~Hr~G~l~vGe~~v~Vavas~hR~~a  127 (172)
                      ..+|.|+||  +..+|+.|+.|+|++|++||+++|++|+++++++|+ +.++.++||+|.|+|||+||+|+|+|+||++|
T Consensus       162 i~~F~G~VR~r~~~~g~~v~~L~ye~y~~~A~~~l~~I~~e~~~~~~-~~~v~v~Hr~G~l~vge~~v~v~v~a~hR~~a  240 (274)
T PRK14493        162 IATFTGRVRAKEDADDEPTEYLEFEKYDGVADERMAAIREELKQRDG-VFEVLLHHRTGVIEAGEDIVFVVVLAGHRQEA  240 (274)
T ss_pred             EEEEEeEEEccccCCCCcEEEEEEEeCCHHHHHHHHHHHHHHHHhCC-CceEEEEEeeccccCCCeEEEEEEecCCHHHH
Confidence            445889999  777899999999999999999999999999999996 99999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhhhCcceeeeecCCCccccccccccc
Q psy11503        128 LSAVEHAINKLKEMAPIWKKEEYAPGTHTDAQWKENS  164 (172)
Q Consensus       128 f~A~~~~id~lK~~vpiWKkE~~~dg~~~~~~W~~~~  164 (172)
                      |+||+|+||+||+++||||||+|.||.    .|++..
T Consensus       241 f~a~~~~id~lK~~~piwK~e~~~~g~----~Wv~~~  273 (274)
T PRK14493        241 FRAVSDGIDRLKDEVPIFKKEVTVDEE----FWVHDR  273 (274)
T ss_pred             HHHHHHHHHHHhhcCCeEEEEEcCCCC----EeecCC
Confidence            999999999999999999999999996    899753

>PF02391 MoaE: MoaE protein; InterPro: IPR003448 This family contains the MoaE protein that is involved in biosynthesis of molybdopterin []

Probab=99.97  E-value=2e-31  Score=201.40  Aligned_cols=92  Identities=37%  Similarity=0.522  Sum_probs=85.4

Q ss_pred             ccccccccccccccceeeEEEEeeChhHHHHHHHHHHHHHHhhCCCccEEEEEEeeeccCCCCeEEEEEeeCcchHHHHH
Q psy11503         50 THTDAQWKENSECMWRVVSLHYEAYKSMALKVFKDICNNLRETWPDIVNVAIYHRLGNVPVSEASVVIAISSPHRQTALS  129 (172)
Q Consensus        50 ~~~~~~wv~nse~G~~V~~L~ye~y~~ma~~~l~~I~~e~~~~~~gi~~v~i~Hr~G~l~vGe~~v~Vavas~hR~~af~  129 (172)
                      ..+|.|+||+..+|++|++|+|++|++||++.|++|+++++++|| +..+.|+||+|+|+|||++|+|+|+|+||++||+
T Consensus        26 i~~F~G~VR~~~~~~~v~~L~ye~y~~ma~~~l~~I~~e~~~~~~-~~~v~i~HR~G~l~vGe~~v~V~vsa~hR~eaf~  104 (117)
T PF02391_consen   26 IVIFNGIVRNHSDGKKVEALEYEAYEEMAEKELEEIAEEARERFG-IVDVAIVHRVGRLKVGEPIVLVAVSAPHRKEAFE  104 (117)
T ss_dssp             EEEEEEE--CCCTCCCEEEEEEEE-HHHHHHHHHHHHHHHHHHST-TCEEEEEEEEEEEETTSEEEEEEEEESSHHHHHH
T ss_pred             EEEEEEEECCCCCCccEEEEEEEEccHHHHHHHHHHHHHHHHhCC-CeEEEEEEeeCCCCCCCeEEEEEEecCCHHHHHH
Confidence            445789999999999999999999999999999999999999997 9999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhhC
Q psy11503        130 AVEHAINKLKEMA  142 (172)
Q Consensus       130 A~~~~id~lK~~v  142 (172)
                      ||+++||+||++|
T Consensus       105 A~~~~id~iK~~V  117 (117)
T PF02391_consen  105 ACEYIIDRIKKEV  117 (117)
T ss_dssp             HHHHHHHHHHHHS
T ss_pred             HHHHHHHHHhhcC
Confidence            9999999999986

Molybdopterin, the universal component of the pterin molybdenum cofactors, contains a dithiolene group serving to bind Mo. Addition of the dithiolene sulphurs to a molybdopterin precursor requires the activity of the converting factor. Converting factor contains the MoaE and MoaD proteins.; GO: 0006777 Mo-molybdopterin cofactor biosynthetic process; PDB: 2WP4_B 2OMD_B 1NVJ_E 1FM0_E 3BII_E 1NVI_E 1FMA_E 2QIE_K 2Q5W_E 3RPF_A ....

>PLN02390 molybdopterin synthase catalytic subunit

Probab=99.75  E-value=1e-18  Score=131.26  Aligned_cols=50  Identities=54%  Similarity=0.838  Sum_probs=48.5

Q ss_pred             CCcccCCCcEEEEEEeCCChHHHHHHHHHHHHHhhhcCCcccccccCCCc
Q psy11503          1 LGNVPVSEASVVIAISSPHRQTALSAVEHAINKLKEMAPIWKKEEYAPGT   50 (172)
Q Consensus         1 ~G~~~~ge~~v~v~v~s~hR~~af~a~~~lId~lK~~~PIwKke~~~~G~   50 (172)
                      +|.|++||++|+|+|+|+||++||+||+++||+||+++||||||.+.+|.
T Consensus        61 ~G~l~vge~~v~v~v~s~HR~~Af~A~~~~id~lK~~vPIWKkE~~~dG~  110 (111)
T PLN02390         61 LGPVPVGETSVFVAVSSVHRADALDACKFLIDELKASVPIWKKEVYDDGE  110 (111)
T ss_pred             eecccCCCEEEEEEEECCCHHHHHHHHHHHHHHHhhcCCEEEeeecCCCC
Confidence            69999999999999999999999999999999999999999999999885

>PRK10678 moaE molybdopterin guanine dinucleotide biosynthesis protein MoaE; Provisional

Probab=99.75  E-value=1e-18  Score=137.43  Aligned_cols=56  Identities=30%  Similarity=0.602  Sum_probs=53.1

Q ss_pred             CCcccCCCcEEEEEEeCCChHHHHHHHHHHHHHhhhcCCcccccccCCCccccccccccc
Q psy11503          1 LGNVPVSEASVVIAISSPHRQTALSAVEHAINKLKEMAPIWKKEEYAPGTHTDAQWKENS   60 (172)
Q Consensus         1 ~G~~~~ge~~v~v~v~s~hR~~af~a~~~lId~lK~~~PIwKke~~~~G~~~~~~wv~ns   60 (172)
                      +|.|++||++|+|+|+|+||++||+||+++||+||+++||||||.+.+|.    .|+.+.
T Consensus        85 ~G~l~~Ge~~v~Vav~s~HR~~Af~A~~~~id~lK~~vPIWKkE~~~dG~----~Wv~~~  140 (150)
T PRK10678         85 VGELWPGDEIVFVGVTSAHRSSAFEAGQFIMDYLKTRAPFWKREATPEGD----RWVEAR  140 (150)
T ss_pred             EecccCCCEEEEEEEECCCHHHHHHHHHHHHHHHhhcCCeEEeEEcCCCC----EEecCC
Confidence            69999999999999999999999999999999999999999999999994    799864

>COG0314 MoaE Molybdopterin converting factor, large subunit [Coenzyme metabolism]

Probab=99.73  E-value=3e-18  Score=134.68  Aligned_cols=57  Identities=40%  Similarity=0.763  Sum_probs=53.9

Q ss_pred             CCcccCCCcEEEEEEeCCChHHHHHHHHHHHHHhhhcCCcccccccCCCcccccccccccc
Q psy11503          1 LGNVPVSEASVVIAISSPHRQTALSAVEHAINKLKEMAPIWKKEEYAPGTHTDAQWKENSE   61 (172)
Q Consensus         1 ~G~~~~ge~~v~v~v~s~hR~~af~a~~~lId~lK~~~PIwKke~~~~G~~~~~~wv~nse   61 (172)
                      +|.|.+||++|+|+|+|+||++||+||+++||++|+++||||+|...+|.    .|+.+..
T Consensus        85 iG~l~~Ge~~v~v~v~s~HR~~Af~a~~~~id~lK~~aPiWKkE~~~dg~----~Wv~~~~  141 (149)
T COG0314          85 IGELKIGEAIVLVGVASAHRKEAFEACEYIIDRLKHRAPIWKKEHTEDGE----RWVGDRE  141 (149)
T ss_pred             eccccCCCcEEEEEEecccHHHHHHHHHHHHHHHHhhCCceEEEecCCCC----eEEeccc
Confidence            69999999999999999999999999999999999999999999999997    5998643

>cd00756 MoaE MoaE family

Probab=99.73  E-value=3.4e-18  Score=130.58  Aligned_cols=53  Identities=49%  Similarity=0.896  Sum_probs=50.0

Q ss_pred             CCcccCCCcEEEEEEeCCChHHHHHHHHHHHHHhhhcCCcccccccCCCcccccccc
Q psy11503          1 LGNVPVSEASVVIAISSPHRQTALSAVEHAINKLKEMAPIWKKEEYAPGTHTDAQWK   57 (172)
Q Consensus         1 ~G~~~~ge~~v~v~v~s~hR~~af~a~~~lId~lK~~~PIwKke~~~~G~~~~~~wv   57 (172)
                      +|.|++||++|+|+|+|+||++||+||+++||+||+++||||+|.+.+|.    .|+
T Consensus        72 ~G~l~vGe~~v~i~v~a~hR~~af~A~~~~id~lK~~~PiWKkE~~~~~~----~Wv  124 (124)
T cd00756          72 VGRLPPGEAIVLVAVSSPHRKEAFEACEFLIDRLKHRAPIWKKEIFEGGE----EWV  124 (124)
T ss_pred             EcccCCCCEEEEEEEecCCHHHHHHHHHHHHHHHHhhCCEEEEEEeCCCC----EEC
Confidence            59999999999999999999999999999999999999999999998775    575

Members of this family are involved in biosynthesis of the molybdenum cofactor (Moco), an essential cofactor for a diverse group of redox enzymes. Moco biosynthesis is an evolutionarily conserved pathway present in eubacteria, archaea and eukaryotes. Moco contains a tricyclic pyranopterin, termed molybdopterin (MPT), which carries the cis-dithiolene group responsible for molybdenum ligation. This dithiolene group is generated by MPT synthase in the second major step in Moco biosynthesis. MPT synthase is a heterotetramer consisting of two large (MoaE) and two small (MoaD) subunits.

>KOG3307|consensus

Probab=99.63  E-value=2.3e-16  Score=120.15  Aligned_cols=60  Identities=58%  Similarity=0.866  Sum_probs=55.6

Q ss_pred             CCcccCCCcEEEEEEeCCChHHHHHHHHHHHHHhhhcCCcccccccCCCccccccccccccccc
Q psy11503          1 LGNVPVSEASVVIAISSPHRQTALSAVEHAINKLKEMAPIWKKEEYAPGTHTDAQWKENSECMW   64 (172)
Q Consensus         1 ~G~~~~ge~~v~v~v~s~hR~~af~a~~~lId~lK~~~PIwKke~~~~G~~~~~~wv~nse~G~   64 (172)
                      +|.+++||++|+|+|||+||..+++||+++||.||+.+||||||.|..+.    -|+.|.++.+
T Consensus        87 LG~VpvgEsSviIavSS~HRa~~l~A~~~~ID~LKa~vPIwKkE~Ye~~~----vWK~N~E~~~  146 (150)
T KOG3307|consen   87 LGKVPVGESSVIIAVSSPHRATALQATEKCIDLLKAHVPIWKKEEYEVDG----VWKSNIEDSK  146 (150)
T ss_pred             ccCcccCcceEEEEecChhhHHHHHHHHHHHHHHHhcCCcccceeeecCc----cccccHHHHH
Confidence            69999999999999999999999999999999999999999999997765    6999977654

>PRK11538 ribosome-associated protein; Provisional

Probab=83.60  E-value=11  Score=27.96  Aligned_cols=63  Identities=8%  Similarity=0.140  Sum_probs=44.0

Q ss_pred             HHHHHHHHHhhCCCccEEEEEEeeeccCCCCeEEEEEeeCcchHHHHHHHHHHHHHHhhh-Ccceeee
Q psy11503         82 FKDICNNLRETWPDIVNVAIYHRLGNVPVSEASVVIAISSPHRQTALSAVEHAINKLKEM-APIWKKE  148 (172)
Q Consensus        82 l~~I~~e~~~~~~gi~~v~i~Hr~G~l~vGe~~v~Vavas~hR~~af~A~~~~id~lK~~-vpiWKkE  148 (172)
                      ++.|++-+..+-  ..+|.++---|.-...|  .+|.++|......-..+..+.+.+|.. .+....|
T Consensus         7 ~~~i~~~l~dkK--a~DI~vlDv~~~~~~~D--y~VIatg~S~rh~~aia~~v~~~~k~~~~~~~~~e   70 (105)
T PRK11538          7 QDFVIDKIDDLK--GQDIIALDVQGKSSITD--CMIICTGTSSRHVMSIADHVVQESRAAGLLPLGVE   70 (105)
T ss_pred             HHHHHHHHHHcC--CCCeEEEECCCCCcccC--EEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCCccc
Confidence            444555555553  57898888888877777  667777777777888889999999863 3333444

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	172
4ap8_A	135	Crystal Structure Of Human Molybdopterin Synthase C		2e-13
2qie_A	148	Staphylococcus Aureus Molybdopterin Synthase In Com		7e-10
2q5w_E	149	The X-Ray Crystal Structure Of Molybdopterin Syntha		7e-10
2omd_A	154	Crystal Structure Of Molybdopterin Converting Facto		2e-06
2wp4_A	147	Crystal Structure Of Rv3119 From Mycobacterium Tube		5e-06
1fm0_E	150	Molybdopterin Synthase (MoadMOAE) Length = 150		1e-05
3bii_E	149	Crystal Structure Of Activated Mpt Synthase Length		1e-05
1nvj_A	140	Deletion Mutant (Delta 141) Of Molybdopterin Syntha		2e-05

>pdb|4AP8|A Chain A, Crystal Structure Of Human Molybdopterin Synthase Catalytic Subunit (Mocs2b) Length = 135

Iteration: 1
 Score = 71.6 bits (174), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 35/86 (40%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
Query: 65  RVVSLHYEAYKSMALKVFKDICNNLRETWPDIVNVAIYHRLGNXXXXXXXXXXXXXXXHR 124
           +V+SL YEAY  MA    + IC+++R+ WP + ++A++HRLG                HR
Sbjct: 49  KVISLEYEAYLPMAENEVRKICSDIRQKWP-VKHIAVFHRLGLVPVSEASIIIAVSSAHR 107
Query: 125 QTALSAVEHAINKLKEMAPIWKKEEY 150
             +L AV +AI+ LK   PIWKKE Y
Sbjct: 108 AASLEAVSYAIDTLKAKVPIWKKEIY 133

>pdb|2QIE|A Chain A, Staphylococcus Aureus Molybdopterin Synthase In Complex With Precursor Z Length = 148

Iteration: 1
 Score = 60.1 bits (144), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 35/97 (36%), Positives = 47/97 (48%), Gaps = 1/97 (1%)
Query: 69  LHYEAYKSMALKVFKDICNNLRETWPDIVNVAIYHRLGNXXXXXXXXXXXXXXXHRQTAL 128
           L YEAY  MA K    I + + E WP  +  +I HR+G                HR+ A 
Sbjct: 47  LEYEAYIPMAEKKLAQIGDEINEKWPGTIT-SIVHRIGPLQISDIAVLIAVSSPHRKDAY 105
Query: 129 SAVEHAINKLKEMAPIWKKEEYAPGTHTDAQWKENSE 165
            A E+AI ++KE+ PIWKKE +  G+      K N E
Sbjct: 106 RANEYAIERIKEIVPIWKKEIWEDGSKWQGHQKGNYE 142

>pdb|2Q5W|E Chain E, The X-Ray Crystal Structure Of Molybdopterin Synthase From Staphylococcus Aureus Length = 149

Iteration: 1
 Score = 59.7 bits (143), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 35/97 (36%), Positives = 47/97 (48%), Gaps = 1/97 (1%)
Query: 69  LHYEAYKSMALKVFKDICNNLRETWPDIVNVAIYHRLGNXXXXXXXXXXXXXXXHRQTAL 128
           L YEAY  MA K    I + + E WP  +  +I HR+G                HR+ A 
Sbjct: 48  LEYEAYIPMAEKKLAQIGDEINEKWPGTIT-SIVHRIGPLQISDIAVLIAVSSPHRKDAY 106
Query: 129 SAVEHAINKLKEMAPIWKKEEYAPGTHTDAQWKENSE 165
            A E+AI ++KE+ PIWKKE +  G+      K N E
Sbjct: 107 RANEYAIERIKEIVPIWKKEIWEDGSKWQGHQKGNYE 143

>pdb|2OMD|A Chain A, Crystal Structure Of Molybdopterin Converting Factor Subunit 2 (Aq_2181) From Aquifex Aeolicus Vf5 Length = 154

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 41/86 (47%), Gaps = 1/86 (1%)
Query: 68  SLHYEAYKSMALKVFKDICNNLRETWPDIVNVAIYHRLGNXXXXXXXXXXXXXXXHRQTA 127
           +L YEAY  MA+K  + I     E +  +  V I+HRLG                HR+  
Sbjct: 53  ALEYEAYPEMAIKEMEKIRQETIEKF-GVKEVFIHHRLGLVKIGEPSFLVLAVGGHREET 111
Query: 128 LSAVEHAINKLKEMAPIWKKEEYAPG 153
             A  +A+++ K+  PIWKKE +  G
Sbjct: 112 FKACRYAVDETKKRVPIWKKEIFKEG 137

>pdb|2WP4|A Chain A, Crystal Structure Of Rv3119 From Mycobacterium Tuberculosis Length = 147

Iteration: 1
 Score = 47.0 bits (110), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 38/95 (40%), Gaps = 5/95 (5%)
Query: 66  VVSLHYEAYKSMALKVFKDICNNLRETWPDIVNVAIYHRLGNXXXXXXXXXXXXXXXHRQ 125
           V  L YEAY  M ++    I     E   + V VA+ HR G                HR 
Sbjct: 53  VTRLFYEAYPPMVIRTLMSIIGRC-EDKAEGVRVAVAHRTGELQIGDAAVVIGASAPHRA 111
Query: 126 TALSAVEHAINKLKEMAPIWKKEEYAPGTHTDAQW 160
            A  A    I  LK+  PIWKKE     + T A+W
Sbjct: 112 EAFDAARMCIELLKQEVPIWKKEF----SSTGAEW 142

>pdb|1FM0|E Chain E, Molybdopterin Synthase (MoadMOAE) Length = 150

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 37/88 (42%), Gaps = 1/88 (1%)
Query: 66  VVSLHYEAYKSMALKVFKDICNNLRETWPDIVNVAIYHRLGNXXXXXXXXXXXXXXXHRQ 125
           V +L  E Y  M  K   +I +  R  WP +  V + HR+G                HR 
Sbjct: 47  VNALTLEHYPGMTEKALAEIVDEARNRWP-LGRVTVIHRIGELWPGDEIVFVGVTSAHRS 105
Query: 126 TALSAVEHAINKLKEMAPIWKKEEYAPG 153
           +A  A +  ++ LK  AP WK+E    G
Sbjct: 106 SAFEAGQFIMDYLKTRAPFWKREATPEG 133

>pdb|3BII|E Chain E, Crystal Structure Of Activated Mpt Synthase Length = 149

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 37/88 (42%), Gaps = 1/88 (1%)
Query: 66  VVSLHYEAYKSMALKVFKDICNNLRETWPDIVNVAIYHRLGNXXXXXXXXXXXXXXXHRQ 125
           V +L  E Y  M  K   +I +  R  WP +  V + HR+G                HR 
Sbjct: 46  VNALTLEHYPGMTEKALAEIVDEARNRWP-LGRVTVIHRIGELWPGDEIVFVGVTSAHRS 104
Query: 126 TALSAVEHAINKLKEMAPIWKKEEYAPG 153
           +A  A +  ++ LK  AP WK+E    G
Sbjct: 105 SAFEAGQFIMDYLKTRAPFWKREATPEG 132

>pdb|1NVJ|A Chain A, Deletion Mutant (Delta 141) Of Molybdopterin Synthase Length = 140

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 37/88 (42%), Gaps = 1/88 (1%)
Query: 66  VVSLHYEAYKSMALKVFKDICNNLRETWPDIVNVAIYHRLGNXXXXXXXXXXXXXXXHRQ 125
           V +L  E Y  M  K   +I +  R  WP +  V + HR+G                HR 
Sbjct: 47  VNALTLEHYPGMTEKALAEIVDEARNRWP-LGRVTVIHRIGELWPGDEIVFVGVTSAHRS 105
Query: 126 TALSAVEHAINKLKEMAPIWKKEEYAPG 153
           +A  A +  ++ LK  AP WK+E    G
Sbjct: 106 SAFEAGQFIMDYLKTRAPFWKREATPEG 133

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	172
2omd_A	154	Molybdopterin-converting factor subunit 2; MOAE, c	7e-36
2omd_A	154	Molybdopterin-converting factor subunit 2; MOAE, c	5e-18
2q5w_E	149	Molybdopterin-converting factor subunit 2; MOCO, M	2e-35
2q5w_E	149	Molybdopterin-converting factor subunit 2; MOCO, M	7e-18
2wp4_A	147	Molybdopterin-converting factor subunit 2 1; trans	3e-35
2wp4_A	147	Molybdopterin-converting factor subunit 2 1; trans	3e-17
1fm0_E	150	Molybdopterin convertin factor, subunit 2; molybde	1e-34
1fm0_E	150	Molybdopterin convertin factor, subunit 2; molybde	3e-17
3rpf_A	148	Molybdopterin synthase catalytic subunit; MCSG, PS	5e-32
3rpf_A	148	Molybdopterin synthase catalytic subunit; MCSG, PS	1e-16

>2omd_A Molybdopterin-converting factor subunit 2; MOAE, coenzyme biosynthesis, structural genomics, NPPSFA; 2.00A {Aquifex aeolicus} Length = 154

 Score =  121 bits (305), Expect = 7e-36
 Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 4/102 (3%)

Query: 65  RVVSLHYEAYKSMALKVFKDICNNLRETWPDIVNVAIYHRLGNVPVSEASVVIAISSPHR 124
            + +L YEAY  MA+K  + I     E +  +  V I+HRLG V + E S ++     HR
Sbjct: 50  NIEALEYEAYPEMAIKEMEKIRQETIEKFG-VKEVFIHHRLGLVKIGEPSFLVLAVGGHR 108

Query: 125 QTALSAVEHAINKLKEMAPIWKKEEYAPGTHTDAQWKENSEC 166
           +    A  +A+++ K+  PIWKKE +  G     +W    + 
Sbjct: 109 EETFKACRYAVDETKKRVPIWKKEIFKEGK---GEWVLGEKK 147

>2omd_A Molybdopterin-converting factor subunit 2; MOAE, coenzyme biosynthesis, structural genomics, NPPSFA; 2.00A {Aquifex aeolicus} Length = 154

 Score = 75.4 bits (186), Expect = 5e-18
 Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 3/62 (4%)

Query: 1   LGNVPVSEASVVIAISSPHRQTALSAVEHAINKLKEMAPIWKKEEYAPGTHTDAQWKENS 60
           LG V + E S ++     HR+    A  +A+++ K+  PIWKKE +  G     +W    
Sbjct: 89  LGLVKIGEPSFLVLAVGGHREETFKACRYAVDETKKRVPIWKKEIFKEGK---GEWVLGE 145

Query: 61  EC 62
           + 
Sbjct: 146 KK 147

>2q5w_E Molybdopterin-converting factor subunit 2; MOCO, MPT synthase, MOAD, MOAE, transferase, molybdenum cofactor biosynthesis; 2.00A {Staphylococcus aureus} PDB: 2qie_A* Length = 149

 Score =  120 bits (302), Expect = 2e-35
 Identities = 40/104 (38%), Positives = 62/104 (59%), Gaps = 5/104 (4%)

Query: 65  RVVSLHYEAYKSMALKVFKDICNNLRETWPDIVNVAIYHRLGNVPVSEASVVIAISSPHR 124
           +   L YEAY  MA K    I + + E WP     +I HR+G + +S+ +V+IA+SSPHR
Sbjct: 44  KTEYLEYEAYIPMAEKKLAQIGDEINEKWP-GTITSIVHRIGPLQISDIAVLIAVSSPHR 102

Query: 125 QTALSAVEHAINKLKEMAPIWKKEEYAPGTHTDAQWKENSECMW 168
           + A  A E+AI ++KE+ PIWKKE +  G+     W+ + +  +
Sbjct: 103 KDAYRANEYAIERIKEIVPIWKKEIWEDGSK----WQGHQKGNY 142

>2q5w_E Molybdopterin-converting factor subunit 2; MOCO, MPT synthase, MOAD, MOAE, transferase, molybdenum cofactor biosynthesis; 2.00A {Staphylococcus aureus} PDB: 2qie_A* Length = 149

 Score = 75.0 bits (185), Expect = 7e-18
 Identities = 25/64 (39%), Positives = 43/64 (67%), Gaps = 4/64 (6%)

Query: 1   LGNVPVSEASVVIAISSPHRQTALSAVEHAINKLKEMAPIWKKEEYAPGTHTDAQWKENS 60
           +G + +S+ +V+IA+SSPHR+ A  A E+AI ++KE+ PIWKKE +  G+     W+ + 
Sbjct: 83  IGPLQISDIAVLIAVSSPHRKDAYRANEYAIERIKEIVPIWKKEIWEDGSK----WQGHQ 138

Query: 61  ECMW 64
           +  +
Sbjct: 139 KGNY 142

>2wp4_A Molybdopterin-converting factor subunit 2 1; transferase; 2.49A {Mycobacterium tuberculosis} Length = 147

 Score =  119 bits (300), Expect = 3e-35
 Identities = 35/99 (35%), Positives = 47/99 (47%), Gaps = 5/99 (5%)

Query: 65  RVVSLHYEAYKSMALKVFKDICNNLRETWPDIVNVAIYHRLGNVPVSEASVVIAISSPHR 124
            V  L YEAY  M ++    I     +     V VA+ HR G + + +A+VVI  S+PHR
Sbjct: 52  DVTRLFYEAYPPMVIRTLMSIIGRCEDKAE-GVRVAVAHRTGELQIGDAAVVIGASAPHR 110

Query: 125 QTALSAVEHAINKLKEMAPIWKKEEYAPGTHTDAQWKEN 163
             A  A    I  LK+  PIWKKE  + G      W  +
Sbjct: 111 AEAFDAARMCIELLKQEVPIWKKEFSSTGAE----WVGD 145

>2wp4_A Molybdopterin-converting factor subunit 2 1; transferase; 2.49A {Mycobacterium tuberculosis} Length = 147

 Score = 73.1 bits (180), Expect = 3e-17
 Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 4/59 (6%)

Query: 1   LGNVPVSEASVVIAISSPHRQTALSAVEHAINKLKEMAPIWKKEEYAPGTHTDAQWKEN 59
            G + + +A+VVI  S+PHR  A  A    I  LK+  PIWKKE  + G      W  +
Sbjct: 91  TGELQIGDAAVVIGASAPHRAEAFDAARMCIELLKQEVPIWKKEFSSTGAE----WVGD 145

>1fm0_E Molybdopterin convertin factor, subunit 2; molybdenum cofactor biosynthesis, transferase; 1.45A {Escherichia coli} SCOP: d.41.5.1 PDB: 1fma_E 1nvi_E 3bii_E 1nvj_A Length = 150

 Score =  117 bits (296), Expect = 1e-34
 Identities = 31/102 (30%), Positives = 47/102 (46%), Gaps = 5/102 (4%)

Query: 65  RVVSLHYEAYKSMALKVFKDICNNLRETWPDIVNVAIYHRLGNVPVSEASVVIAISSPHR 124
            V +L  E Y  M  K   +I +  R  WP +  V + HR+G +   +  V + ++S HR
Sbjct: 46  SVNALTLEHYPGMTEKALAEIVDEARNRWP-LGRVTVIHRIGELWPGDEIVFVGVTSAHR 104

Query: 125 QTALSAVEHAINKLKEMAPIWKKEEYAPGTHTDAQWKENSEC 166
            +A  A +  ++ LK  AP WK+E    G      W E  E 
Sbjct: 105 SSAFEAGQFIMDYLKTRAPFWKREATPEGDR----WVEARES 142

>1fm0_E Molybdopterin convertin factor, subunit 2; molybdenum cofactor biosynthesis, transferase; 1.45A {Escherichia coli} SCOP: d.41.5.1 PDB: 1fma_E 1nvi_E 3bii_E 1nvj_A Length = 150

 Score = 73.1 bits (180), Expect = 3e-17
 Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 4/62 (6%)

Query: 1   LGNVPVSEASVVIAISSPHRQTALSAVEHAINKLKEMAPIWKKEEYAPGTHTDAQWKENS 60
           +G +   +  V + ++S HR +A  A +  ++ LK  AP WK+E    G      W E  
Sbjct: 85  IGELWPGDEIVFVGVTSAHRSSAFEAGQFIMDYLKTRAPFWKREATPEGDR----WVEAR 140

Query: 61  EC 62
           E 
Sbjct: 141 ES 142

>3rpf_A Molybdopterin synthase catalytic subunit; MCSG, PSI-biology, structural genomics, midwest center for S genomics, transferase; 1.90A {Helicobacter pylori} Length = 148

 Score =  111 bits (279), Expect = 5e-32
 Identities = 19/100 (19%), Positives = 42/100 (42%), Gaps = 7/100 (7%)

Query: 66  VVSLHYEAYKSMALKVFKDICNNLRETWPDIVNVAIYHRLGNVPVSEASVVIAISSPHRQ 125
           +  L ++ Y+++    F+   +  ++       + + H LG+V + ++S +      +R+
Sbjct: 46  IQGLSFDIYEALLKTWFEKWHHKAKDLGVV---LKMAHSLGDVLIGQSSFLCVSMGKNRK 102

Query: 126 TALSAVEHAINKLKEMAPIWKKEEYAPGTHTDAQWKENSE 165
            AL   E+ I   K  APIWK +           + +   
Sbjct: 103 NALELYENFIEDFKHNAPIWKYDLIHNKRI----YAKERS 138

>3rpf_A Molybdopterin synthase catalytic subunit; MCSG, PSI-biology, structural genomics, midwest center for S genomics, transferase; 1.90A {Helicobacter pylori} Length = 148

 Score = 71.6 bits (176), Expect = 1e-16
 Identities = 15/61 (24%), Positives = 26/61 (42%), Gaps = 4/61 (6%)

Query: 1   LGNVPVSEASVVIAISSPHRQTALSAVEHAINKLKEMAPIWKKEEYAPGTHTDAQWKENS 60
           LG+V + ++S +      +R+ AL   E+ I   K  APIWK +           + +  
Sbjct: 82  LGDVLIGQSSFLCVSMGKNRKNALELYENFIEDFKHNAPIWKYDLIHNKRI----YAKER 137

Query: 61  E 61
            
Sbjct: 138 S 138

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	172
1fm0_E	150	Molybdopterin convertin factor, subunit 2; molybde	100.0
2wp4_A	147	Molybdopterin-converting factor subunit 2 1; trans	100.0
2omd_A	154	Molybdopterin-converting factor subunit 2; MOAE, c	100.0
2q5w_E	149	Molybdopterin-converting factor subunit 2; MOCO, M	100.0
4ap8_A	135	Molybdopterin synthase catalytic subunit; transfer	100.0
3rpf_A	148	Molybdopterin synthase catalytic subunit; MCSG, PS	100.0
1fm0_E	150	Molybdopterin convertin factor, subunit 2; molybde	99.77
2wp4_A	147	Molybdopterin-converting factor subunit 2 1; trans	99.76
2q5w_E	149	Molybdopterin-converting factor subunit 2; MOCO, M	99.76
2omd_A	154	Molybdopterin-converting factor subunit 2; MOAE, c	99.76
3rpf_A	148	Molybdopterin synthase catalytic subunit; MCSG, PS	99.75
4ap8_A	135	Molybdopterin synthase catalytic subunit; transfer	99.73
2id1_A	130	Hypothetical protein; alpha-beta protein, structur	85.1
2o5a_A	125	BH1328 protein; BHR21, NESG, structural genomics,	84.56

>1fm0_E Molybdopterin convertin factor, subunit 2; molybdenum cofactor biosynthesis, transferase; 1.45A {Escherichia coli} SCOP: d.41.5.1 PDB: 1fma_E 1nvi_E 3bii_E 1nvj_A

Probab=100.00  E-value=7.7e-42  Score=267.32  Aligned_cols=114  Identities=29%  Similarity=0.481  Sum_probs=101.7

Q ss_pred             CccccccccccccccceeeEEEEeeChhHHHHHHHHHHHHHHhhCCCccEEEEEEeeeccCCCCeEEEEEeeCcchHHHH
Q psy11503         49 GTHTDAQWKENSECMWRVVSLHYEAYKSMALKVFKDICNNLRETWPDIVNVAIYHRLGNVPVSEASVVIAISSPHRQTAL  128 (172)
Q Consensus        49 G~~~~~~wv~nse~G~~V~~L~ye~y~~ma~~~l~~I~~e~~~~~~gi~~v~i~Hr~G~l~vGe~~v~Vavas~hR~~af  128 (172)
                      +..+|.|+||+.++|++|.+|+||+|++||++.|++|+++++++|| +.++.|+||+|.|+|||+||+|+|+|+||++||
T Consensus        30 Avv~F~G~VR~~~~g~~V~~L~ye~Y~~ma~~~l~~I~~ea~~r~~-~~~v~v~HR~G~l~vGe~~v~VaVss~HR~~Af  108 (150)
T 1fm0_E           30 AVVTFTGKVRNHNLGDSVNALTLEHYPGMTEKALAEIVDEARNRWP-LGRVTVIHRIGELWPGDEIVFVGVTSAHRSSAF  108 (150)
T ss_dssp             EEEEEEEECC-------CCCEEEEECHHHHHHHHHHHHHHHHHHSC-EEEEEEEEECEEECTTCEEEEEEEEESSHHHHH
T ss_pred             eEEEEEEEECCCCCCCcEeEEEEEecchHHHHHHHHHHHHHHHhCC-CceEEEEEEEcccCCCCEEEEEEEEcCcHHHHH
Confidence            3456889999999999999999999999999999999999999996 999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhhCcceeeeecCCCcccccccccccccc
Q psy11503        129 SAVEHAINKLKEMAPIWKKEEYAPGTHTDAQWKENSECM  167 (172)
Q Consensus       129 ~A~~~~id~lK~~vpiWKkE~~~dg~~~~~~W~~~~~~~  167 (172)
                      +||+++||+||+++||||||+|.||+    .|+++++++
T Consensus       109 ~A~~~~iD~lK~~aPiWKkE~~~dG~----~Wv~~~~~d  143 (150)
T 1fm0_E          109 EAGQFIMDYLKTRAPFWKREATPEGD----RWVEARESD  143 (150)
T ss_dssp             HHHHHHHHHHHHHSCEEEEEEETTEE----EECCCCHHH
T ss_pred             HHHHHHHHHHHhcCCEEEEEEcCCCC----EecCCCcCc
Confidence            99999999999999999999999997    899887654

>2wp4_A Molybdopterin-converting factor subunit 2 1; transferase; 2.49A {Mycobacterium tuberculosis}

Probab=100.00  E-value=1.7e-41  Score=264.60  Aligned_cols=110  Identities=32%  Similarity=0.493  Sum_probs=91.6

Q ss_pred             ccccccccccccccceeeEEEEeeChhHHHHHHHHHHHHHHhhCCCccEEEEEEeeeccCCCCeEEEEEeeCcchHHHHH
Q psy11503         50 THTDAQWKENSECMWRVVSLHYEAYKSMALKVFKDICNNLRETWPDIVNVAIYHRLGNVPVSEASVVIAISSPHRQTALS  129 (172)
Q Consensus        50 ~~~~~~wv~nse~G~~V~~L~ye~y~~ma~~~l~~I~~e~~~~~~gi~~v~i~Hr~G~l~vGe~~v~Vavas~hR~~af~  129 (172)
                      ..+|.|+||+..+|++|.+|+||+|++||++.|++|+++++++|| +.++.|+||+|.|+|||+||+|+|+|+||++||+
T Consensus        37 vv~F~G~VR~~~~g~~V~~Leye~y~~ma~~~l~~I~~ea~~r~~-~~~v~i~HR~G~l~vGe~~v~VaVss~HR~~Af~  115 (147)
T 2wp4_A           37 IVIFVGNVRDHNAGHDVTRLFYEAYPPMVIRTLMSIIGRCEDKAE-GVRVAVAHRTGELQIGDAAVVIGASAPHRAEAFD  115 (147)
T ss_dssp             EEEEEEECCC-------CEEEEECCHHHHHHHHHHHHHHHHTSST-TCEEEEEEECEEECTTCEEEEEEEEESSHHHHHH
T ss_pred             EEEEEEEECCCCCCCcEEEEEEEeCchHHHHHHHHHHHHHHHhCC-CceEEEEEEEcccCCCCeEEEEEEeccCHHHHHH
Confidence            445889999999999999999999999999999999999999997 9999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhhCcceeeeecCCCccccccccccc
Q psy11503        130 AVEHAINKLKEMAPIWKKEEYAPGTHTDAQWKENS  164 (172)
Q Consensus       130 A~~~~id~lK~~vpiWKkE~~~dg~~~~~~W~~~~  164 (172)
                      ||+++||+||+++||||||+|.||+    .|+++.
T Consensus       116 A~~~~iD~lK~~aPiWKkE~~~dG~----~Wv~~~  146 (147)
T 2wp4_A          116 AARMCIELLKQEVPIWKKEFSSTGA----EWVGDR  146 (147)
T ss_dssp             HHHHHHHHHHHHCCCEEEEECC-------------
T ss_pred             HHHHHHHHHHhhCCEEEEEEeCCCC----EEeCCC
Confidence            9999999999999999999999997    899864

>2omd_A Molybdopterin-converting factor subunit 2; MOAE, coenzyme biosynthesis, structural genomics, NPPSFA; 2.00A {Aquifex aeolicus}

Probab=100.00  E-value=1.2e-41  Score=267.18  Aligned_cols=114  Identities=29%  Similarity=0.434  Sum_probs=98.6

Q ss_pred             Cccccccccccccccc-eeeEEEEeeChhHHHHHHHHHHHHHHhhCCCccEEEEEEeeeccCCCCeEEEEEeeCcchHHH
Q psy11503         49 GTHTDAQWKENSECMW-RVVSLHYEAYKSMALKVFKDICNNLRETWPDIVNVAIYHRLGNVPVSEASVVIAISSPHRQTA  127 (172)
Q Consensus        49 G~~~~~~wv~nse~G~-~V~~L~ye~y~~ma~~~l~~I~~e~~~~~~gi~~v~i~Hr~G~l~vGe~~v~Vavas~hR~~a  127 (172)
                      +..+|.|+||+.++|+ +|.+|+||+|++||++.|++|+++++++|| |.++.|+||+|.|+|||+||+|+|+|+||++|
T Consensus        33 Avv~F~G~VR~~~~g~~~V~~Leye~y~~mae~~l~~I~~ea~~r~~-l~~v~v~HR~G~l~vGe~iv~VaVss~HR~~A  111 (154)
T 2omd_A           33 AQVLFLGIPRNAPEDGGNIEALEYEAYPEMAIKEMEKIRQETIEKFG-VKEVFIHHRLGLVKIGEPSFLVLAVGGHREET  111 (154)
T ss_dssp             EEEEEEECCCCCGGGTSCEEEEEEEECHHHHHHHHHHHHHHHHHHHC-CSEEEEEEECEEEETTSCCEEEEEEESSHHHH
T ss_pred             EEEEEEEEECCCCCCcccEEEEEEEeCchHHHHHHHHHHHHHHHhCC-CceEEEEEEEcccCCCCeEEEEEEeccCHHHH
Confidence            3456889999999999 999999999999999999999999999996 99999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhhhCcceeeeecCCCccccccccccccc
Q psy11503        128 LSAVEHAINKLKEMAPIWKKEEYAPGTHTDAQWKENSEC  166 (172)
Q Consensus       128 f~A~~~~id~lK~~vpiWKkE~~~dg~~~~~~W~~~~~~  166 (172)
                      |+||+++||+||+++||||||++.||+   +.|+++++.
T Consensus       112 f~A~~~~iD~lK~~aPiWKkE~~~dG~---~~Wv~~~~~  147 (154)
T 2omd_A          112 FKACRYAVDETKKRVPIWKKEIFKEGK---GEWVLGEKK  147 (154)
T ss_dssp             HHHHHHHHHHHHHHSCEEEEEEEC---------------
T ss_pred             HHHHHHHHHHHHhhCCEEEEEEeCCCC---ceecCCCCC
Confidence            999999999999999999999999996   589988754

>2q5w_E Molybdopterin-converting factor subunit 2; MOCO, MPT synthase, MOAD, MOAE, transferase, molybdenum cofactor biosynthesis; 2.00A {Staphylococcus aureus} PDB: 2qie_A*

Probab=100.00  E-value=3e-41  Score=263.68  Aligned_cols=112  Identities=36%  Similarity=0.593  Sum_probs=105.7

Q ss_pred             CccccccccccccccceeeEEEEeeChhHHHHHHHHHHHHHHhhCCCccEEEEEEeeeccCCCCeEEEEEeeCcchHHHH
Q psy11503         49 GTHTDAQWKENSECMWRVVSLHYEAYKSMALKVFKDICNNLRETWPDIVNVAIYHRLGNVPVSEASVVIAISSPHRQTAL  128 (172)
Q Consensus        49 G~~~~~~wv~nse~G~~V~~L~ye~y~~ma~~~l~~I~~e~~~~~~gi~~v~i~Hr~G~l~vGe~~v~Vavas~hR~~af  128 (172)
                      +..+|.|+||+..+|++|.+|+||+|++||++.|++|+++++++|| +.++.|+||+|.|+|||+||+|+|+|+||++||
T Consensus        28 Avv~F~G~VR~~~~g~~V~~L~ye~y~~ma~~~l~~I~~ea~~r~~-~~~v~v~HR~G~l~vGe~~v~VaVss~HR~~Af  106 (149)
T 2q5w_E           28 AVVVFTGHVREWTKGVKTEYLEYEAYIPMAEKKLAQIGDEINEKWP-GTITSIVHRIGPLQISDIAVLIAVSSPHRKDAY  106 (149)
T ss_dssp             EEEEEEEECCSCSSSSCEEEEEEEECHHHHHHHHHHHHHHHHHHST-TCEEEEEEECEEECTTCEEEEEEEEESSHHHHH
T ss_pred             EEEEEEEEECCCCCCCcEEEEEEEeCchHHHHHHHHHHHHHHHhCC-CcEEEEEEEEcccCCCCeEEEEEEEcccHHHHH
Confidence            3445889999999999999999999999999999999999999997 999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhhCcceeeeecCCCcccccccccccc
Q psy11503        129 SAVEHAINKLKEMAPIWKKEEYAPGTHTDAQWKENSE  165 (172)
Q Consensus       129 ~A~~~~id~lK~~vpiWKkE~~~dg~~~~~~W~~~~~  165 (172)
                      +||+++||+||+++||||||+|.||+    .|+++..
T Consensus       107 ~A~~~~iD~lK~~aPiWKkE~~~dG~----~Wv~~~~  139 (149)
T 2q5w_E          107 RANEYAIERIKEIVPIWKKEIWEDGS----KWQGHQK  139 (149)
T ss_dssp             HHHHHHHHHHHHHCCEEEEEEETTEE----EECCC--
T ss_pred             HHHHHHHHHHHhhCCEEEEEEcCCCC----EEecCCC
Confidence            99999999999999999999999997    8998754

>4ap8_A Molybdopterin synthase catalytic subunit; transferase; 2.78A {Homo sapiens}

Probab=100.00  E-value=5.7e-40  Score=252.69  Aligned_cols=103  Identities=46%  Similarity=0.736  Sum_probs=98.7

Q ss_pred             CccccccccccccccceeeEEEEeeChhHHHHHHHHHHHHHHhhCCCccEEEEEEeeeccCCCCeEEEEEeeCcchHHHH
Q psy11503         49 GTHTDAQWKENSECMWRVVSLHYEAYKSMALKVFKDICNNLRETWPDIVNVAIYHRLGNVPVSEASVVIAISSPHRQTAL  128 (172)
Q Consensus        49 G~~~~~~wv~nse~G~~V~~L~ye~y~~ma~~~l~~I~~e~~~~~~gi~~v~i~Hr~G~l~vGe~~v~Vavas~hR~~af  128 (172)
                      +..+|.|+||+..+|++|.+|+||+|++||++.|++|+++++++|| +.++.|+||+|.|+|||+||+|+|+|+||++||
T Consensus        33 Avv~F~G~VR~~~~g~~V~~L~ye~y~~ma~~~l~~I~~ea~~r~~-l~~v~i~HR~G~l~~ge~~v~Vav~s~HR~~Af  111 (135)
T 4ap8_A           33 AISLFVGTTRNNFEGKKVISLEYEAYLPMAENEVRKICSDIRQKWP-VKHIAVFHRLGLVPVSEASIIIAVSSAHRAASL  111 (135)
T ss_dssp             EEEEEEEECCSEETTEEEEEEEEEEEETHHHHHHHHHHHHHHHHSC-EEEEEEEEECEEEETTSEEEEEEEEESSHHHHH
T ss_pred             eEEEEEEEECCCCCCCcEEEEEEEecchHHHHHHHHHHHHHHHhcC-CcceeehhhcccccCCCeEEEEEEEccCHHHHH
Confidence            3455889999999999999999999999999999999999999997 999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhhCcceeeeecCC
Q psy11503        129 SAVEHAINKLKEMAPIWKKEEYAP  152 (172)
Q Consensus       129 ~A~~~~id~lK~~vpiWKkE~~~d  152 (172)
                      +||+|+||+||+++||||||+|+|
T Consensus       112 ~A~~~~id~lK~~~PiWKkE~~~D  135 (135)
T 4ap8_A          112 EAVSYAIDTLKAKVPIWKKEIYEE  135 (135)
T ss_dssp             HHHHHHHHHHHHHSCEEEEEEEC-
T ss_pred             HHHHHHHHHHhhcCCceeceeccC
Confidence            999999999999999999999986

>3rpf_A Molybdopterin synthase catalytic subunit; MCSG, PSI-biology, structural genomics, midwest center for S genomics, transferase; 1.90A {Helicobacter pylori}

Probab=100.00  E-value=6e-38  Score=244.76  Aligned_cols=110  Identities=17%  Similarity=0.292  Sum_probs=101.3

Q ss_pred             CccccccccccccccceeeEEEEeeChhHHHHHHHHHHHHHHhhCCCccEEEEEEeeeccCCCCeEEEEEeeCcchHHHH
Q psy11503         49 GTHTDAQWKENSECMWRVVSLHYEAYKSMALKVFKDICNNLRETWPDIVNVAIYHRLGNVPVSEASVVIAISSPHRQTAL  128 (172)
Q Consensus        49 G~~~~~~wv~nse~G~~V~~L~ye~y~~ma~~~l~~I~~e~~~~~~gi~~v~i~Hr~G~l~vGe~~v~Vavas~hR~~af  128 (172)
                      +..+|.|+||+.+   .|++|+||+|++||++.|++|+++++++|  + ++.|+||+|.|+|||++|+|+|+|+||++||
T Consensus        32 Avv~F~G~VR~~~---~V~~L~ye~y~~ma~~~l~~I~~ea~~~~--~-~v~i~HR~G~l~~Ge~~v~VaVss~HR~~Af  105 (148)
T 3rpf_A           32 AFCVFVGIVRKED---NIQGLSFDIYEALLKTWFEKWHHKAKDLG--V-VLKMAHSLGDVLIGQSSFLCVSMGKNRKNAL  105 (148)
T ss_dssp             EEEEEEEECCCCT---TCCEEEEEECHHHHHHHHHHHHHHHHHTT--E-EEEEEEEEEEEETTCEEEEEEEEESSHHHHH
T ss_pred             EEEEEEEEEECCC---CEeEEEEEcCHHHHHHHHHHHHHHHhhcC--C-EEEEEEEEcccCCCCEEEEEEEEcccHHHHH
Confidence            3456889999862   49999999999999999999999999975  5 8999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhhCcceeeeecCCCccccccccccccccc
Q psy11503        129 SAVEHAINKLKEMAPIWKKEEYAPGTHTDAQWKENSECMW  168 (172)
Q Consensus       129 ~A~~~~id~lK~~vpiWKkE~~~dg~~~~~~W~~~~~~~~  168 (172)
                      +||+++||+||+++||||||++.||+    .|+.+.+..-
T Consensus       106 ~A~~~~id~lK~~~PiWKkE~~~~g~----~Wv~~r~~~~  141 (148)
T 3rpf_A          106 ELYENFIEDFKHNAPIWKYDLIHNKR----IYAKERSHPL  141 (148)
T ss_dssp             HHHHHHHHHHHHHSCEEEEEEETTEE----EECGGGCBCC
T ss_pred             HHHHHHHHHHHhcCCEEEEEEeCCCc----EEecCCcccc
Confidence            99999999999999999999998886    9999987653

>1fm0_E Molybdopterin convertin factor, subunit 2; molybdenum cofactor biosynthesis, transferase; 1.45A {Escherichia coli} SCOP: d.41.5.1 PDB: 1fma_E 1nvi_E 3bii_E 1nvj_A

Probab=99.77  E-value=1.2e-19  Score=141.56  Aligned_cols=56  Identities=30%  Similarity=0.608  Sum_probs=53.4

Q ss_pred             CCcccCCCcEEEEEEeCCChHHHHHHHHHHHHHhhhcCCcccccccCCCccccccccccc
Q psy11503          1 LGNVPVSEASVVIAISSPHRQTALSAVEHAINKLKEMAPIWKKEEYAPGTHTDAQWKENS   60 (172)
Q Consensus         1 ~G~~~~ge~~v~v~v~s~hR~~af~a~~~lId~lK~~~PIwKke~~~~G~~~~~~wv~ns   60 (172)
                      +|.|+|||+||+|+|+|+||++||+||+++||+||+++||||||.+.+|.    .||.+.
T Consensus        85 ~G~l~vGe~~v~VaVss~HR~~Af~A~~~~iD~lK~~aPiWKkE~~~dG~----~Wv~~~  140 (150)
T 1fm0_E           85 IGELWPGDEIVFVGVTSAHRSSAFEAGQFIMDYLKTRAPFWKREATPEGD----RWVEAR  140 (150)
T ss_dssp             CEEECTTCEEEEEEEEESSHHHHHHHHHHHHHHHHHHSCEEEEEEETTEE----EECCCC
T ss_pred             EcccCCCCEEEEEEEEcCcHHHHHHHHHHHHHHHHhcCCEEEEEEcCCCC----EecCCC
Confidence            69999999999999999999999999999999999999999999999996    799764

>2wp4_A Molybdopterin-converting factor subunit 2 1; transferase; 2.49A {Mycobacterium tuberculosis}

Probab=99.76  E-value=2.2e-19  Score=139.71  Aligned_cols=55  Identities=40%  Similarity=0.728  Sum_probs=46.4

Q ss_pred             CCcccCCCcEEEEEEeCCChHHHHHHHHHHHHHhhhcCCcccccccCCCcccccccccc
Q psy11503          1 LGNVPVSEASVVIAISSPHRQTALSAVEHAINKLKEMAPIWKKEEYAPGTHTDAQWKEN   59 (172)
Q Consensus         1 ~G~~~~ge~~v~v~v~s~hR~~af~a~~~lId~lK~~~PIwKke~~~~G~~~~~~wv~n   59 (172)
                      +|.|++||+||+|+|+|+||++||+||+++||+||+++||||||.+.+|.    .||.+
T Consensus        91 ~G~l~vGe~~v~VaVss~HR~~Af~A~~~~iD~lK~~aPiWKkE~~~dG~----~Wv~~  145 (147)
T 2wp4_A           91 TGELQIGDAAVVIGASAPHRAEAFDAARMCIELLKQEVPIWKKEFSSTGA----EWVGD  145 (147)
T ss_dssp             CEEECTTCEEEEEEEEESSHHHHHHHHHHHHHHHHHHCCCEEEEECC------------
T ss_pred             EcccCCCCeEEEEEEeccCHHHHHHHHHHHHHHHHhhCCEEEEEEeCCCC----EEeCC
Confidence            69999999999999999999999999999999999999999999999996    79875

>2q5w_E Molybdopterin-converting factor subunit 2; MOCO, MPT synthase, MOAD, MOAE, transferase, molybdenum cofactor biosynthesis; 2.00A {Staphylococcus aureus} PDB: 2qie_A*

Probab=99.76  E-value=2.2e-19  Score=139.91  Aligned_cols=57  Identities=44%  Similarity=0.859  Sum_probs=53.1

Q ss_pred             CCcccCCCcEEEEEEeCCChHHHHHHHHHHHHHhhhcCCcccccccCCCcccccccccccc
Q psy11503          1 LGNVPVSEASVVIAISSPHRQTALSAVEHAINKLKEMAPIWKKEEYAPGTHTDAQWKENSE   61 (172)
Q Consensus         1 ~G~~~~ge~~v~v~v~s~hR~~af~a~~~lId~lK~~~PIwKke~~~~G~~~~~~wv~nse   61 (172)
                      +|.|+|||+||+|+|+|+||++||+||+++||+||+++||||||.+.+|.    .||.+..
T Consensus        83 ~G~l~vGe~~v~VaVss~HR~~Af~A~~~~iD~lK~~aPiWKkE~~~dG~----~Wv~~~~  139 (149)
T 2q5w_E           83 IGPLQISDIAVLIAVSSPHRKDAYRANEYAIERIKEIVPIWKKEIWEDGS----KWQGHQK  139 (149)
T ss_dssp             CEEECTTCEEEEEEEEESSHHHHHHHHHHHHHHHHHHCCEEEEEEETTEE----EECCC--
T ss_pred             EcccCCCCeEEEEEEEcccHHHHHHHHHHHHHHHHhhCCEEEEEEcCCCC----EEecCCC
Confidence            69999999999999999999999999999999999999999999999996    7998643

>2omd_A Molybdopterin-converting factor subunit 2; MOAE, coenzyme biosynthesis, structural genomics, NPPSFA; 2.00A {Aquifex aeolicus}

Probab=99.76  E-value=2.4e-19  Score=140.47  Aligned_cols=57  Identities=32%  Similarity=0.594  Sum_probs=46.4

Q ss_pred             CCcccCCCcEEEEEEeCCChHHHHHHHHHHHHHhhhcCCcccccccCCCccccccccccc
Q psy11503          1 LGNVPVSEASVVIAISSPHRQTALSAVEHAINKLKEMAPIWKKEEYAPGTHTDAQWKENS   60 (172)
Q Consensus         1 ~G~~~~ge~~v~v~v~s~hR~~af~a~~~lId~lK~~~PIwKke~~~~G~~~~~~wv~ns   60 (172)
                      +|.|+|||+||+|+|+|+||++||+||+++||+||+++||||||.+.+|+.   .||.+.
T Consensus        89 ~G~l~vGe~iv~VaVss~HR~~Af~A~~~~iD~lK~~aPiWKkE~~~dG~~---~Wv~~~  145 (154)
T 2omd_A           89 LGLVKIGEPSFLVLAVGGHREETFKACRYAVDETKKRVPIWKKEIFKEGKG---EWVLGE  145 (154)
T ss_dssp             CEEEETTSCCEEEEEEESSHHHHHHHHHHHHHHHHHHSCEEEEEEEC-------------
T ss_pred             EcccCCCCeEEEEEEeccCHHHHHHHHHHHHHHHHhhCCEEEEEEeCCCCc---eecCCC
Confidence            699999999999999999999999999999999999999999999999942   799764

>3rpf_A Molybdopterin synthase catalytic subunit; MCSG, PSI-biology, structural genomics, midwest center for S genomics, transferase; 1.90A {Helicobacter pylori}

Probab=99.75  E-value=3.8e-19  Score=138.48  Aligned_cols=57  Identities=26%  Similarity=0.427  Sum_probs=53.7

Q ss_pred             CCcccCCCcEEEEEEeCCChHHHHHHHHHHHHHhhhcCCcccccccCCCcccccccccccc
Q psy11503          1 LGNVPVSEASVVIAISSPHRQTALSAVEHAINKLKEMAPIWKKEEYAPGTHTDAQWKENSE   61 (172)
Q Consensus         1 ~G~~~~ge~~v~v~v~s~hR~~af~a~~~lId~lK~~~PIwKke~~~~G~~~~~~wv~nse   61 (172)
                      +|.|+|||++|+|+|+|+||++||+||+++||+||+++||||||.+.+|.    .|+.+++
T Consensus        82 ~G~l~~Ge~~v~VaVss~HR~~Af~A~~~~id~lK~~~PiWKkE~~~~g~----~Wv~~r~  138 (148)
T 3rpf_A           82 LGDVLIGQSSFLCVSMGKNRKNALELYENFIEDFKHNAPIWKYDLIHNKR----IYAKERS  138 (148)
T ss_dssp             EEEEETTCEEEEEEEEESSHHHHHHHHHHHHHHHHHHSCEEEEEEETTEE----EECGGGC
T ss_pred             EcccCCCCEEEEEEEEcccHHHHHHHHHHHHHHHHhcCCEEEEEEeCCCc----EEecCCc
Confidence            59999999999999999999999999999999999999999999998886    7998754

>4ap8_A Molybdopterin synthase catalytic subunit; transferase; 2.78A {Homo sapiens}

Probab=99.73  E-value=1.7e-18  Score=132.98  Aligned_cols=48  Identities=60%  Similarity=0.888  Sum_probs=45.8

Q ss_pred             CCcccCCCcEEEEEEeCCChHHHHHHHHHHHHHhhhcCCcccccccCC
Q psy11503          1 LGNVPVSEASVVIAISSPHRQTALSAVEHAINKLKEMAPIWKKEEYAP   48 (172)
Q Consensus         1 ~G~~~~ge~~v~v~v~s~hR~~af~a~~~lId~lK~~~PIwKke~~~~   48 (172)
                      +|.|+|||+||+|+|+|+||++||+||+++||.||+++||||||.|.|
T Consensus        88 ~G~l~~ge~~v~Vav~s~HR~~Af~A~~~~id~lK~~~PiWKkE~~~D  135 (135)
T 4ap8_A           88 LGLVPVSEASIIIAVSSAHRAASLEAVSYAIDTLKAKVPIWKKEIYEE  135 (135)
T ss_dssp             CEEEETTSEEEEEEEEESSHHHHHHHHHHHHHHHHHHSCEEEEEEEC-
T ss_pred             cccccCCCeEEEEEEEccCHHHHHHHHHHHHHHHhhcCCceeceeccC
Confidence            699999999999999999999999999999999999999999999864

>2id1_A Hypothetical protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 3.00A {Chromobacterium violaceum} SCOP: d.218.1.12

Probab=85.10  E-value=5.2  Score=29.75  Aligned_cols=73  Identities=14%  Similarity=0.104  Sum_probs=51.2

Q ss_pred             HHHHHHHHHHHhhCCCccEEEEEEeeeccCCCCeEEEEEeeCcchHHHHHHHHHHHHHHhhh-CcceeeeecCCCccccc
Q psy11503         80 KVFKDICNNLRETWPDIVNVAIYHRLGNVPVSEASVVIAISSPHRQTALSAVEHAINKLKEM-APIWKKEEYAPGTHTDA  158 (172)
Q Consensus        80 ~~l~~I~~e~~~~~~gi~~v~i~Hr~G~l~vGe~~v~Vavas~hR~~af~A~~~~id~lK~~-vpiWKkE~~~dg~~~~~  158 (172)
                      +.++.|++-+..+-  -.+|.+.---|.....|  .||.++|......-..+..+.+.+|.. .+..+.|=..+     +
T Consensus         5 ~l~~~i~~al~dkK--a~DI~vlDv~~~s~~~D--yfVIaTg~S~rqv~Aiad~v~~~lk~~g~~~~~~EG~~~-----~   75 (130)
T 2id1_A            5 EISKLAIEALEDIK--GKDIIELDTSKLTSLFQ--RMIVATGDSNRQVKALANSVQVKLKEAGVDIVGSEGHES-----G   75 (130)
T ss_dssp             HHHHHHHHHHHHTT--CEEEEEEEGGGTCSSCS--EEEEEECSSHHHHHHHHHHHHHHHHHTTCCCCBCCSTTT-----S
T ss_pred             HHHHHHHHHHHHcC--CCCeEEEEcCCCCcccC--EEEEEEcCCHHHHHHHHHHHHHHHHHcCCcCccccCCCC-----C
Confidence            33444544455553  58899998889888888  677888888888999999999999864 22335553333     4


Q ss_pred             ccc
Q psy11503        159 QWK  161 (172)
Q Consensus       159 ~W~  161 (172)
                      .|+
T Consensus        76 ~Wv   78 (130)
T 2id1_A           76 EWV   78 (130)
T ss_dssp             SEE
T ss_pred             CEE
Confidence            586

>2o5a_A BH1328 protein; BHR21, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.70A {Bacillus halodurans} SCOP: d.218.1.12

Probab=84.56  E-value=5.4  Score=29.42  Aligned_cols=73  Identities=11%  Similarity=0.170  Sum_probs=49.7

Q ss_pred             HHHHHHHHHHHhhCCCccEEEEEEeeeccCCCCeEEEEEeeCcchHHHHHHHHHHHHHHhhh-CcceeeeecCCCccccc
Q psy11503         80 KVFKDICNNLRETWPDIVNVAIYHRLGNVPVSEASVVIAISSPHRQTALSAVEHAINKLKEM-APIWKKEEYAPGTHTDA  158 (172)
Q Consensus        80 ~~l~~I~~e~~~~~~gi~~v~i~Hr~G~l~vGe~~v~Vavas~hR~~af~A~~~~id~lK~~-vpiWKkE~~~dg~~~~~  158 (172)
                      +.++.|++-+..+-  -.++.+.---|.....|  .||.++|......-..+..+.+.+|.. .+..+.|-..+|     
T Consensus         5 ~l~~~i~~al~dkK--a~DI~vlDv~~~s~~~D--yfVIatg~S~rqv~Aiad~v~~~lk~~g~~~~~~EG~~~~-----   75 (125)
T 2o5a_A            5 ELLQLAVNAVDDKK--AEQVVALNMKGISLIAD--FFLICHGNSEKQVQAIAHELKKVAQEQGIEIKRLEGYEQA-----   75 (125)
T ss_dssp             HHHHHHHHHHHHTT--CEEEEEEECBTTBC--C--EEEEEEESSHHHHHHHHHHHHHHHHHTTCCCCEEESTTTT-----
T ss_pred             HHHHHHHHHHHHcC--CCCeEEEEcCCCCcccC--EEEEEEcCCHHHHHHHHHHHHHHHHHcCCccccccCCCCC-----
Confidence            33444555555553  58898988888888887  577777888888888999999999874 233466644444     


Q ss_pred             ccc
Q psy11503        159 QWK  161 (172)
Q Consensus       159 ~W~  161 (172)
                      .|+
T Consensus        76 ~Wv   78 (125)
T 2o5a_A           76 RWV   78 (125)
T ss_dssp             SEE
T ss_pred             CEE
Confidence            586

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	172
d1fm0e_	149	d.41.5.1 (E:) Molybdopterin synthase subunit MoaE	2e-21
d1fm0e_	149	d.41.5.1 (E:) Molybdopterin synthase subunit MoaE	4e-12

>d1fm0e_ d.41.5.1 (E:) Molybdopterin synthase subunit MoaE {Escherichia coli [TaxId: 562]} Length = 149

class: Alpha and beta proteins (a+b)
fold: alpha/beta-Hammerhead
superfamily: Molybdopterin synthase subunit MoaE
family: Molybdopterin synthase subunit MoaE
domain: Molybdopterin synthase subunit MoaE
species: Escherichia coli [TaxId: 562]

 Score = 82.7 bits (204), Expect = 2e-21
 Identities = 31/102 (30%), Positives = 47/102 (46%), Gaps = 5/102 (4%)

Query: 65  RVVSLHYEAYKSMALKVFKDICNNLRETWPDIVNVAIYHRLGNVPVSEASVVIAISSPHR 124
            V +L  E Y  M  K   +I +  R  WP +  V + HR+G +   +  V + ++S HR
Sbjct: 45  SVNALTLEHYPGMTEKALAEIVDEARNRWP-LGRVTVIHRIGELWPGDEIVFVGVTSAHR 103

Query: 125 QTALSAVEHAINKLKEMAPIWKKEEYAPGTHTDAQWKENSEC 166
            +A  A +  ++ LK  AP WK+E    G      W E  E 
Sbjct: 104 SSAFEAGQFIMDYLKTRAPFWKREATPEGDR----WVEARES 141

>d1fm0e_ d.41.5.1 (E:) Molybdopterin synthase subunit MoaE {Escherichia coli [TaxId: 562]} Length = 149

class: Alpha and beta proteins (a+b)
fold: alpha/beta-Hammerhead
superfamily: Molybdopterin synthase subunit MoaE
family: Molybdopterin synthase subunit MoaE
domain: Molybdopterin synthase subunit MoaE
species: Escherichia coli [TaxId: 562]

 Score = 58.4 bits (141), Expect = 4e-12
 Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 4/62 (6%)

Query: 1   LGNVPVSEASVVIAISSPHRQTALSAVEHAINKLKEMAPIWKKEEYAPGTHTDAQWKENS 60
           +G +   +  V + ++S HR +A  A +  ++ LK  AP WK+E    G      W E  
Sbjct: 84  IGELWPGDEIVFVGVTSAHRSSAFEAGQFIMDYLKTRAPFWKREATPEGDR----WVEAR 139

Query: 61  EC 62
           E 
Sbjct: 140 ES 141

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	172
d1fm0e_	149	Molybdopterin synthase subunit MoaE {Escherichia c	100.0
d1fm0e_	149	Molybdopterin synthase subunit MoaE {Escherichia c	99.74
d2id1a1	120	Hypothetical protein CV0518 {Chromobacterium viola	83.43
d2o5aa1	113	Uncharacterized protein BH1328 {Bacillus haloduran	81.32

>d1fm0e_ d.41.5.1 (E:) Molybdopterin synthase subunit MoaE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: alpha/beta-Hammerhead
superfamily: Molybdopterin synthase subunit MoaE
family: Molybdopterin synthase subunit MoaE
domain: Molybdopterin synthase subunit MoaE
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.1e-41  Score=264.41  Aligned_cols=115  Identities=29%  Similarity=0.469  Sum_probs=102.6

Q ss_pred             CccccccccccccccceeeEEEEeeChhHHHHHHHHHHHHHHhhCCCccEEEEEEeeeccCCCCeEEEEEeeCcchHHHH
Q psy11503         49 GTHTDAQWKENSECMWRVVSLHYEAYKSMALKVFKDICNNLRETWPDIVNVAIYHRLGNVPVSEASVVIAISSPHRQTAL  128 (172)
Q Consensus        49 G~~~~~~wv~nse~G~~V~~L~ye~y~~ma~~~l~~I~~e~~~~~~gi~~v~i~Hr~G~l~vGe~~v~Vavas~hR~~af  128 (172)
                      +..+|.|+||+..+|++|++|+||+|++||++.|++|++++.++|+ +.++.|+||+|.|+|||+||+|+|+|+||++||
T Consensus        29 Aiv~F~G~VR~~~~g~~V~~L~ye~y~~ma~k~l~~I~~ea~~k~~-l~~v~i~HR~G~l~vGe~~v~v~v~s~HR~~Af  107 (149)
T d1fm0e_          29 AVVTFTGKVRNHNLGDSVNALTLEHYPGMTEKALAEIVDEARNRWP-LGRVTVIHRIGELWPGDEIVFVGVTSAHRSSAF  107 (149)
T ss_dssp             EEEEEEEECC-------CCCEEEEECHHHHHHHHHHHHHHHHHHSC-EEEEEEEEECEEECTTCEEEEEEEEESSHHHHH
T ss_pred             eEEEEEEEECCCCCCCceeEEEEEechhHHHHHHHHHHHHHHhccC-cccEEEEEeeceecCCCeeEEEEEecCCHHHHH
Confidence            3556889999999999999999999999999999999999999996 999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhhCcceeeeecCCCccccccccccccccc
Q psy11503        129 SAVEHAINKLKEMAPIWKKEEYAPGTHTDAQWKENSECMW  168 (172)
Q Consensus       129 ~A~~~~id~lK~~vpiWKkE~~~dg~~~~~~W~~~~~~~~  168 (172)
                      +||+++||+||+++||||||++.||+    .|+.+++++.
T Consensus       108 ~a~~~~id~lK~~vPiWKkE~~~dg~----~Wv~~~~~d~  143 (149)
T d1fm0e_         108 EAGQFIMDYLKTRAPFWKREATPEGD----RWVEARESDQ  143 (149)
T ss_dssp             HHHHHHHHHHHHHSCEEEEEEETTEE----EECCCCHHHH
T ss_pred             HHHHHHHHHHHhcCCeEeeEecCCcC----eEccCcccCH
Confidence            99999999999999999999999997    8999887653

>d1fm0e_ d.41.5.1 (E:) Molybdopterin synthase subunit MoaE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: alpha/beta-Hammerhead
superfamily: Molybdopterin synthase subunit MoaE
family: Molybdopterin synthase subunit MoaE
domain: Molybdopterin synthase subunit MoaE
species: Escherichia coli [TaxId: 562]

Probab=99.74  E-value=2.5e-19  Score=137.77  Aligned_cols=57  Identities=32%  Similarity=0.618  Sum_probs=54.0

Q ss_pred             CCcccCCCcEEEEEEeCCChHHHHHHHHHHHHHhhhcCCcccccccCCCcccccccccccc
Q psy11503          1 LGNVPVSEASVVIAISSPHRQTALSAVEHAINKLKEMAPIWKKEEYAPGTHTDAQWKENSE   61 (172)
Q Consensus         1 ~G~~~~ge~~v~v~v~s~hR~~af~a~~~lId~lK~~~PIwKke~~~~G~~~~~~wv~nse   61 (172)
                      +|.|+|||++|+|+|+|+||++||+||+++||.||+++||||||.+.+|.    .||.+..
T Consensus        84 ~G~l~vGe~~v~v~v~s~HR~~Af~a~~~~id~lK~~vPiWKkE~~~dg~----~Wv~~~~  140 (149)
T d1fm0e_          84 IGELWPGDEIVFVGVTSAHRSSAFEAGQFIMDYLKTRAPFWKREATPEGD----RWVEARE  140 (149)
T ss_dssp             CEEECTTCEEEEEEEEESSHHHHHHHHHHHHHHHHHHSCEEEEEEETTEE----EECCCCH
T ss_pred             eceecCCCeeEEEEEecCCHHHHHHHHHHHHHHHHhcCCeEeeEecCCcC----eEccCcc
Confidence            69999999999999999999999999999999999999999999999996    6998654

>d2id1a1 d.218.1.12 (A:1-120) Hypothetical protein CV0518 {Chromobacterium violaceum [TaxId: 536]}

class: Alpha and beta proteins (a+b)
fold: Nucleotidyltransferase
superfamily: Nucleotidyltransferase
family: Iojap/YbeB-like
domain: Hypothetical protein CV0518
species: Chromobacterium violaceum [TaxId: 536]

Probab=83.43  E-value=3.3  Score=28.44  Aligned_cols=59  Identities=10%  Similarity=0.030  Sum_probs=43.6

Q ss_pred             HHHHHHHHHHHhhCCCccEEEEEEeeeccCCCCeEEEEEeeCcchHHHHHHHHHHHHHHhhh
Q psy11503         80 KVFKDICNNLRETWPDIVNVAIYHRLGNVPVSEASVVIAISSPHRQTALSAVEHAINKLKEM  141 (172)
Q Consensus        80 ~~l~~I~~e~~~~~~gi~~v~i~Hr~G~l~vGe~~v~Vavas~hR~~af~A~~~~id~lK~~  141 (172)
                      ++|.+++-++...-. ..++.+.---|.-...|  .+|.++|..+...-..++.+.+.+|..
T Consensus         4 ~~l~~~i~~~l~d~K-a~DI~vldv~~~~~~~D--~~VI~Tg~S~rh~~aia~~i~~~lk~~   62 (120)
T d2id1a1           4 QEISKLAIEALEDIK-GKDIIELDTSKLTSLFQ--RMIVATGDSNRQVKALANSVQVKLKEA   62 (120)
T ss_dssp             HHHHHHHHHHHHHTT-CEEEEEEEGGGTCSSCS--EEEEEECSSHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHcC-CCCeEEEECCCCCcccc--EEEEEEecCHHHHHHHHHHHHHHHHHc
Confidence            445555545444443 68898887777778887  577788888888888899999999865

>d2o5aa1 d.218.1.12 (A:2-114) Uncharacterized protein BH1328 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a+b)
fold: Nucleotidyltransferase
superfamily: Nucleotidyltransferase
family: Iojap/YbeB-like
domain: Uncharacterized protein BH1328
species: Bacillus halodurans [TaxId: 86665]

Probab=81.32  E-value=6  Score=26.75  Aligned_cols=73  Identities=12%  Similarity=0.178  Sum_probs=48.5

Q ss_pred             HHHHHHHHHHHhhCCCccEEEEEEeeeccCCCCeEEEEEeeCcchHHHHHHHHHHHHHHhhh-CcceeeeecCCCccccc
Q psy11503         80 KVFKDICNNLRETWPDIVNVAIYHRLGNVPVSEASVVIAISSPHRQTALSAVEHAINKLKEM-APIWKKEEYAPGTHTDA  158 (172)
Q Consensus        80 ~~l~~I~~e~~~~~~gi~~v~i~Hr~G~l~vGe~~v~Vavas~hR~~af~A~~~~id~lK~~-vpiWKkE~~~dg~~~~~  158 (172)
                      +.++.|++-+..+-  -.++.++---|..+..|  .+|.++|..+...-..++.+.+.+|.. .+..+.|-..+     +
T Consensus         4 el~~~i~~~l~dkK--a~dI~vldv~~~~~~~D--~~VIatg~S~rh~~aia~~v~~~~k~~~~~~~~~eG~~~-----~   74 (113)
T d2o5aa1           4 ELLQLAVNAVDDKK--AEQVVALNMKGISLIAD--FFLICHGNSEKQVQAIAHELKKVAQEQGIEIKRLEGYEQ-----A   74 (113)
T ss_dssp             HHHHHHHHHHHHTT--CEEEEEEECBTTBC--C--EEEEEEESSHHHHHHHHHHHHHHHHHTTCCCCEEESTTT-----T
T ss_pred             HHHHHHHHHHHHcC--CCCeEEEECCCCCcccC--EEEEEEeCCHHHHHHHHHHHHHHHHHhccccccccCCCC-----C
Confidence            34444555555553  57898888878887777  566778888888888888999888865 35556664433     4


Q ss_pred             ccc
Q psy11503        159 QWK  161 (172)
Q Consensus       159 ~W~  161 (172)
                      .|+
T Consensus        75 ~Wv   77 (113)
T d2o5aa1          75 RWV   77 (113)
T ss_dssp             SEE
T ss_pred             CEE
Confidence            586