Psyllid ID: psy11519

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150
Protein Sequence
MNDQITSALELTISMSLKMCSLSTHSRPAVNRCRLNRPYCLDNIDSLLHLVDPPSIDFRSTVSRSLCRLENVTNFTEFVKAFSQFGGEMVELAHVTGERGGDLKDERRRAQMSAARQVLERSTMLLLTSSKTCLRHPDSETARQNRDTVF
Secondary Structure (PSIPRED)
cHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHcccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHcccHHHHccHHHcccccHHHHHHHccccc
Coil and Loop (DISEMBL)
MNDQITSALELTISMSLKMcslsthsrpavnrcrlnrpycldnidsllhlvdppsidfrstVSRSLCRLENVTNFTEFVKAFSQFGGEMVELAHVtgerggdlKDERRRAQMSAARQVLERSTMLLLTssktclrhpdsetarqnrdtvf
Flexible Loop (DISEMBL)
MNDQITSALELTISMSLKMCSLSTHSRPAVNRCRLNRPYCLDNIDSLLHLVDPPSIDFRSTVSRSLCRLENVTNFTEFVKAFSQFGGEMVELAHVtgerggdlkdERRRAQMSAARQVLERSTMLLltssktclrhpdsetarqnrdtvf
Low Complexity Region (SEG)
MNDQITSALELTISMSLKMCSLSTHSRPAVNRCRLNRPYCLDNIDSLLHLVDPPSIDFRSTVSRSLCRLENVTNFTEFVKAFSQFGGEMVELAHVTGERGGDLKDERRRAQMSAARQVLERSTMLLLTSSKTCLRHPDSETARQNRDTVF
Disordered region (IsUnstruct)
**********LTISMSLKMCSLSTHSRPAVNRCRLNRPYCLDNIDSLLHLVDPPSIDFRSTVSRSLCRLENVTNFTEFVKAFSQFGGEMVELAHVT******************************************************
Disordered Region (DISOPRED)
*********ELTISMS******************LNRPYCLDNIDSLLHLVDPPSIDFRSTVSRSLCRLENVTNFTEFVKAFSQFGGEMVELAHVTGERGGDLKDERRRAQMSAARQVLERSTMLLLTSSKTCLRHPDSETARQNRDTVF
Disordered Region (DISEMBL)
MNDQITSALELTISMSLKMCSLSTHSRPAVNRCRLNRPYCLDNIDSLLHLVDPPSIDFRSTVSRSLCRLENVTNFTEFVKAFSQFGGEMVELAHVTGERGGDLKDERRRAQMSAARQVLERSTMLLLTSSKTCLRH**************
Disordered Region (DISPRO)
MNDQITSALELTISMSLKMCSLSTHSRPAVNRCRLNRPYCLDNIDSLLHLVDPPSIDFRSTVSRSLCRLENVTNFTEFVKAFSQFGGEMVELAHVTGERGGDLKDERRRAQMSAARQVLERSTMLLLTSSKTCLRHPDSETARQNR****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MNDQITSALELTISMSLKMCSLSTHSRPAVNRCRLNRPYCLDNIDSLLHLVDPPSIDFRSTVSRSLCRLENVTNFTEFVKAFSQFGGEMVELAHVTGERGGDLKDERRRAQMSAARQVLERSTMLLLTSSKTCLRHPDSETARQNRDTVF
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	150	2.2.26 [Sep-21-2011]
O88327	731	Alpha-catulin OS=Mus musc	yes	N/A	0.613	0.125	0.576	9e-27
Q5RC06	734	Alpha-catulin OS=Pongo ab	yes	N/A	0.633	0.129	0.578	1e-20
Q9UBT7	734	Alpha-catulin OS=Homo sap	yes	N/A	0.633	0.129	0.578	1e-20
P30997	906	Catenin alpha-2 OS=Gallus	no	N/A	0.593	0.098	0.415	2e-13
Q5R416	905	Catenin alpha-2 OS=Pongo	no	N/A	0.593	0.098	0.415	2e-13
Q61301	953	Catenin alpha-2 OS=Mus mu	no	N/A	0.593	0.093	0.415	2e-13
P26232	953	Catenin alpha-2 OS=Homo s	no	N/A	0.593	0.093	0.415	2e-13
A4IGI7	966	Catenin alpha-2 OS=Xenopu	no	N/A	0.593	0.092	0.415	3e-13
Q6GLP0	966	Catenin alpha-2 OS=Xenopu	N/A	N/A	0.593	0.092	0.404	4e-12
P35220	917	Catenin alpha OS=Drosophi	no	N/A	0.593	0.097	0.348	8e-09

>sp|O88327|CTNL1_MOUSE Alpha-catulin OS=Mus musculus GN=Ctnnal1 PE=2 SV=1

 Score =  119 bits (297), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 53/92 (57%), Positives = 72/92 (78%)

Query: 59  RSTVSRSLCRLENVTNFTEFVKAFSQFGGEMVELAHVTGERGGDLKDERRRAQMSAARQV 118
           R+ +  ++ RLE V +F EFV+ FSQFG EMVE AH+TG+R  DLKDE+++A+M+ AR V
Sbjct: 170 RNKILATMERLEKVNSFQEFVQIFSQFGNEMVEFAHLTGDRQNDLKDEKKKARMAVARAV 229

Query: 119 LERSTMLLLTSSKTCLRHPDSETARQNRDTVF 150
           LE+ TM+LLT+SKTCLRHP  E+A  N++ VF
Sbjct: 230 LEKGTMMLLTASKTCLRHPSCESAHTNKEGVF 261

May modulate the Rho pathway signaling by providing a scaffold for the Lbc Rho guanine nucleotide exchange factor (ARHGEF1).
Mus musculus (taxid: 10090)

>sp|Q5RC06|CTNL1_PONAB Alpha-catulin OS=Pongo abelii GN=CTNNAL1 PE=2 SV=1

 Score = 98.2 bits (243), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 55/95 (57%), Positives = 76/95 (80%)

Query: 56  IDFRSTVSRSLCRLENVTNFTEFVKAFSQFGGEMVELAHVTGERGGDLKDERRRAQMSAA 115
           I  R+ V  ++ RLE V +F EFV+ FSQFG EMVE AH++G+R  DLKDE+++A+M+AA
Sbjct: 168 ITSRNKVLATMERLEKVNSFQEFVQIFSQFGNEMVEFAHLSGDRQNDLKDEKKKAKMAAA 227

Query: 116 RQVLERSTMLLLTSSKTCLRHPDSETARQNRDTVF 150
           R VLE+ TM+LLT+SKTCLRHP+ E+A +N++ VF
Sbjct: 228 RAVLEKCTMMLLTASKTCLRHPNCESAHKNKEGVF 262

May modulate the Rho pathway signaling by providing a scaffold for the Lbc Rho guanine nucleotide exchange factor (ARHGEF1).

Pongo abelii (taxid: 9601)

>sp|Q9UBT7|CTNL1_HUMAN Alpha-catulin OS=Homo sapiens GN=CTNNAL1 PE=1 SV=2

 Score = 98.2 bits (243), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 55/95 (57%), Positives = 76/95 (80%)

Query: 56  IDFRSTVSRSLCRLENVTNFTEFVKAFSQFGGEMVELAHVTGERGGDLKDERRRAQMSAA 115
           I  R+ V  ++ RLE V +F EFV+ FSQFG EMVE AH++G+R  DLKDE+++A+M+AA
Sbjct: 168 ITSRNKVLATMERLEKVNSFQEFVQIFSQFGNEMVEFAHLSGDRQNDLKDEKKKAKMAAA 227

Query: 116 RQVLERSTMLLLTSSKTCLRHPDSETARQNRDTVF 150
           R VLE+ TM+LLT+SKTCLRHP+ E+A +N++ VF
Sbjct: 228 RAVLEKCTMMLLTASKTCLRHPNCESAHKNKEGVF 262

May modulate the Rho pathway signaling by providing a scaffold for the Lbc Rho guanine nucleotide exchange factor (ARHGEF1).

Homo sapiens (taxid: 9606)

>sp|P30997|CTNA2_CHICK Catenin alpha-2 OS=Gallus gallus GN=CTNNA2 PE=1 SV=1

 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 37/89 (41%), Positives = 53/89 (59%)

Query: 62  VSRSLCRLENVTNFTEFVKAFSQFGGEMVELAHVTGERGGDLKDERRRAQMSAARQVLER 121
           V  +L  ++N TN  +    F +FG EMV+L +V   R  +LKD   R +M+AAR  L++
Sbjct: 156 VEEALEAVKNATNEQDLANRFKEFGKEMVKLNYVAARRQQELKDPHCRDEMAAARGALKK 215

Query: 122 STMLLLTSSKTCLRHPDSETARQNRDTVF 150
           +  +L T+S+  LRHPD    R NRD VF
Sbjct: 216 NATMLYTASQAFLRHPDVAATRANRDYVF 244

May function as a linker between cadherin adhesion receptors and the cytoskeleton to regulate cell-cell adhesion and differentiation in the nervous system.

Gallus gallus (taxid: 9031)

>sp|Q5R416|CTNA2_PONAB Catenin alpha-2 OS=Pongo abelii GN=CTNNA2 PE=2 SV=3

 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 37/89 (41%), Positives = 53/89 (59%)

Query: 62  VSRSLCRLENVTNFTEFVKAFSQFGGEMVELAHVTGERGGDLKDERRRAQMSAARQVLER 121
           V  +L  ++N TN  +    F +FG EMV+L +V   R  +LKD   R +M+AAR  L++
Sbjct: 156 VEEALEAVKNATNEQDLANRFKEFGKEMVKLNYVAARRQQELKDPHCRDEMAAARGALKK 215

Query: 122 STMLLLTSSKTCLRHPDSETARQNRDTVF 150
           +  +L T+S+  LRHPD    R NRD VF
Sbjct: 216 NATMLYTASQAFLRHPDVAATRANRDYVF 244

May function as a linker between cadherin adhesion receptors and the cytoskeleton to regulate cell-cell adhesion and differentiation in the nervous system. Regulates morphological plasticity of synapses and cerebellar and hippocampal lamination during development. Functions in the control of startle modulation.

Pongo abelii (taxid: 9601)

>sp|Q61301|CTNA2_MOUSE Catenin alpha-2 OS=Mus musculus GN=Ctnna2 PE=1 SV=3

 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 37/89 (41%), Positives = 53/89 (59%)

Query: 62  VSRSLCRLENVTNFTEFVKAFSQFGGEMVELAHVTGERGGDLKDERRRAQMSAARQVLER 121
           V  +L  ++N TN  +    F +FG EMV+L +V   R  +LKD   R +M+AAR  L++
Sbjct: 156 VEEALEAVKNATNEQDLANRFKEFGKEMVKLNYVAARRQQELKDPHCRDEMAAARGALKK 215

Query: 122 STMLLLTSSKTCLRHPDSETARQNRDTVF 150
           +  +L T+S+  LRHPD    R NRD VF
Sbjct: 216 NATMLYTASQAFLRHPDVAATRANRDYVF 244

May function as a linker between cadherin adhesion receptors and the cytoskeleton to regulate cell-cell adhesion and differentiation in the nervous system. Regulates morphological plasticity of synapses and cerebellar and hippocampal lamination during development. Functions in the control of startle modulation.

Mus musculus (taxid: 10090)

>sp|P26232|CTNA2_HUMAN Catenin alpha-2 OS=Homo sapiens GN=CTNNA2 PE=1 SV=5

 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 37/89 (41%), Positives = 53/89 (59%)

Query: 62  VSRSLCRLENVTNFTEFVKAFSQFGGEMVELAHVTGERGGDLKDERRRAQMSAARQVLER 121
           V  +L  ++N TN  +    F +FG EMV+L +V   R  +LKD   R +M+AAR  L++
Sbjct: 156 VEEALEAVKNATNEQDLANRFKEFGKEMVKLNYVAARRQQELKDPHCRDEMAAARGALKK 215

Query: 122 STMLLLTSSKTCLRHPDSETARQNRDTVF 150
           +  +L T+S+  LRHPD    R NRD VF
Sbjct: 216 NATMLYTASQAFLRHPDVAATRANRDYVF 244

May function as a linker between cadherin adhesion receptors and the cytoskeleton to regulate cell-cell adhesion and differentiation in the nervous system. Regulates morphological plasticity of synapses and cerebellar and hippocampal lamination during development. Functions in the control of startle modulation.

Homo sapiens (taxid: 9606)

>sp|A4IGI7|CTNA2_XENTR Catenin alpha-2 OS=Xenopus tropicalis GN=ctnna2 PE=2 SV=1

 Score = 74.3 bits (181), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 37/89 (41%), Positives = 53/89 (59%)

Query: 62  VSRSLCRLENVTNFTEFVKAFSQFGGEMVELAHVTGERGGDLKDERRRAQMSAARQVLER 121
           V  +L  ++N TN  +    F +FG EMV+L +V   R  +LKD   R +M+AAR  L++
Sbjct: 156 VEEALESVKNATNEQDLAHRFKEFGKEMVKLNYVAARRQQELKDPHCRDEMAAARGALKK 215

Query: 122 STMLLLTSSKTCLRHPDSETARQNRDTVF 150
           +  +L T+S+  LRHPD    R NRD VF
Sbjct: 216 NATMLYTASQAFLRHPDVAATRANRDYVF 244

May function as a linker between cadherin adhesion receptors and the cytoskeleton to regulate cell-cell adhesion and differentiation in the nervous system.

Xenopus tropicalis (taxid: 8364)

>sp|Q6GLP0|CTNA2_XENLA Catenin alpha-2 OS=Xenopus laevis GN=ctnna2 PE=2 SV=1

 Score = 70.1 bits (170), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 36/89 (40%), Positives = 52/89 (58%)

Query: 62  VSRSLCRLENVTNFTEFVKAFSQFGGEMVELAHVTGERGGDLKDERRRAQMSAARQVLER 121
           V  +L  ++N TN  +    F +FG EMV+L +V   R  +LKD   R +M+AAR  L++
Sbjct: 156 VEEALEMVKNATNEQDLAHRFKEFGKEMVKLNYVAARRQQELKDPHCRDEMAAARGALKK 215

Query: 122 STMLLLTSSKTCLRHPDSETARQNRDTVF 150
           +  +L T+S+  LRH D    R NRD VF
Sbjct: 216 NATMLYTASQAFLRHSDVAATRANRDYVF 244

May function as a linker between cadherin adhesion receptors and the cytoskeleton to regulate cell-cell adhesion and differentiation in the nervous system.

Xenopus laevis (taxid: 8355)

>sp|P35220|CTNA_DROME Catenin alpha OS=Drosophila melanogaster GN=alpha-Cat PE=1 SV=2

 Score = 59.3 bits (142), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 52/89 (58%)

Query: 62  VSRSLCRLENVTNFTEFVKAFSQFGGEMVELAHVTGERGGDLKDERRRAQMSAARQVLER 121
           V   L +L+N ++  E +    QFG    EL     +R  +LKD + R  ++AAR +L++
Sbjct: 162 VEDDLNKLKNASSQDELMDNMRQFGRNAGELIKQAAKRQQELKDPQLRDDLAAARAMLKK 221

Query: 122 STMLLLTSSKTCLRHPDSETARQNRDTVF 150
            + +LLT+SK  +RHP+ + A+ NRD + 
Sbjct: 222 HSTMLLTASKVYVRHPELDLAKVNRDFIL 250

Associates with the cytoplasmic domain of a variety of cadherins. The association of catenins to cadherins produces a complex which is linked to the actin filament network, and which seems to be of primary importance for cadherins cell-adhesion properties. Can associate with the armadillo protein.

Drosophila melanogaster (taxid: 7227)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	150
242013151	734	alpha-catulin, putative [Pediculus human	0.613	0.125	0.793	2e-35
328717366	366	PREDICTED: alpha-catulin-like, partial [	0.633	0.259	0.789	4e-35
321465664	734	hypothetical protein DAPPUDRAFT_54984 [D	0.613	0.125	0.728	2e-32
158287550	833	AGAP011097-PA [Anopheles gambiae str. PE	0.593	0.106	0.775	4e-32
291233455	743	PREDICTED: alpha-catulin, putative-like	0.613	0.123	0.673	2e-29
307167509	756	Alpha-catulin [Camponotus floridanus]	0.66	0.130	0.719	3e-29
332030215	823	Alpha-catulin [Acromyrmex echinatior]	0.66	0.120	0.719	3e-29
350401125	845	PREDICTED: alpha-catulin-like isoform 3	0.613	0.108	0.793	1e-28
340709563	845	PREDICTED: alpha-catulin-like isoform 3	0.613	0.108	0.793	1e-28
340709561	838	PREDICTED: alpha-catulin-like isoform 2	0.613	0.109	0.793	1e-28

>gi|242013151|ref|XP_002427278.1| alpha-catulin, putative [Pediculus humanus corporis] gi|212511619|gb|EEB14540.1| alpha-catulin, putative [Pediculus humanus corporis]

 Score =  153 bits (387), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 73/92 (79%), Positives = 81/92 (88%)

Query: 59  RSTVSRSLCRLENVTNFTEFVKAFSQFGGEMVELAHVTGERGGDLKDERRRAQMSAARQV 118
           +  V+RSL RLENVTNFTEFVKAFSQFG EMVELAH+TG+R  D KDERRRAQM AARQV
Sbjct: 143 KDKVTRSLGRLENVTNFTEFVKAFSQFGAEMVELAHLTGDRQNDTKDERRRAQMQAARQV 202

Query: 119 LERSTMLLLTSSKTCLRHPDSETARQNRDTVF 150
           LERSTM+LL SSKTCLRHP+  +AR+NRDTVF
Sbjct: 203 LERSTMMLLVSSKTCLRHPECHSARENRDTVF 234

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328717366|ref|XP_003246185.1| PREDICTED: alpha-catulin-like, partial [Acyrthosiphon pisum]

 Score =  152 bits (384), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 75/95 (78%), Positives = 80/95 (84%)

Query: 56  IDFRSTVSRSLCRLENVTNFTEFVKAFSQFGGEMVELAHVTGERGGDLKDERRRAQMSAA 115
           I  +  VSRSL RLE V NFTEFVKAFS FG EMVELAH+TGER  DLKDERRR+Q++AA
Sbjct: 217 ISVKDKVSRSLGRLEGVNNFTEFVKAFSHFGTEMVELAHLTGERQNDLKDERRRSQIAAA 276

Query: 116 RQVLERSTMLLLTSSKTCLRHPDSETARQNRDTVF 150
           RQVLERSTMLLLTSSK CLRHPDS  A QNRDTVF
Sbjct: 277 RQVLERSTMLLLTSSKACLRHPDSSEASQNRDTVF 311

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|321465664|gb|EFX76664.1| hypothetical protein DAPPUDRAFT_54984 [Daphnia pulex]

 Score =  143 bits (361), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 67/92 (72%), Positives = 79/92 (85%)

Query: 59  RSTVSRSLCRLENVTNFTEFVKAFSQFGGEMVELAHVTGERGGDLKDERRRAQMSAARQV 118
           +  VS +L RLE V NFTEFVKAFSQFG EMV+ AHVTG+R  DLKDERRRAQMSAAR +
Sbjct: 116 KDKVSNTLTRLEGVNNFTEFVKAFSQFGSEMVDFAHVTGDRQNDLKDERRRAQMSAARTI 175

Query: 119 LERSTMLLLTSSKTCLRHPDSETARQNRDTVF 150
           LERST++LLT+SKTCLRHP+  ++R+NRDTVF
Sbjct: 176 LERSTLMLLTASKTCLRHPECTSSRENRDTVF 207

Source: Daphnia pulex

Species: Daphnia pulex

Genus: Daphnia

Family: Daphniidae

Order: Diplostraca

Class: Branchiopoda

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|158287550|ref|XP_309552.4| AGAP011097-PA [Anopheles gambiae str. PEST] gi|157019705|gb|EAA05079.5| AGAP011097-PA [Anopheles gambiae str. PEST]

 Score =  142 bits (358), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 69/89 (77%), Positives = 78/89 (87%)

Query: 62  VSRSLCRLENVTNFTEFVKAFSQFGGEMVELAHVTGERGGDLKDERRRAQMSAARQVLER 121
           V+R+L RLE+V NFTEFVKAFS FG EMVELAHVTG R  DLKDERRRAQMS+ARQVLER
Sbjct: 131 VARTLGRLESVANFTEFVKAFSVFGAEMVELAHVTGNRQNDLKDERRRAQMSSARQVLER 190

Query: 122 STMLLLTSSKTCLRHPDSETARQNRDTVF 150
           STM+LLTSSKTCLRH +   +++NRDTVF
Sbjct: 191 STMMLLTSSKTCLRHSECAHSKENRDTVF 219

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|291233455|ref|XP_002736668.1| PREDICTED: alpha-catulin, putative-like [Saccoglossus kowalevskii]

 Score =  134 bits (336), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 62/92 (67%), Positives = 76/92 (82%)

Query: 59  RSTVSRSLCRLENVTNFTEFVKAFSQFGGEMVELAHVTGERGGDLKDERRRAQMSAARQV 118
           +  V  SL +LE V+NFT+FV+AFSQFG EMVELAH+TG+R  DLKDE+ RA+M AAR V
Sbjct: 148 KDKVDSSLSKLEYVSNFTDFVQAFSQFGSEMVELAHLTGDRQNDLKDEKHRAKMGAARAV 207

Query: 119 LERSTMLLLTSSKTCLRHPDSETARQNRDTVF 150
           LE+STM+LLTS KT LRHPD E+A++NRD VF
Sbjct: 208 LEKSTMMLLTSCKTSLRHPDCESAKENRDGVF 239

Source: Saccoglossus kowalevskii

Species: Saccoglossus kowalevskii

Genus: Saccoglossus

Family: Harrimaniidae

Class: Enteropneusta

Phylum: Hemichordata

Superkingdom: Eukaryota

>gi|307167509|gb|EFN61082.1| Alpha-catulin [Camponotus floridanus]

 Score =  133 bits (334), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 77/107 (71%), Positives = 90/107 (84%), Gaps = 8/107 (7%)

Query: 44  IDSLLHLVDPPSIDFRSTVSRSLCRLENVTNFTEFVKAFSQFGGEMVELAHVTGERGGDL 103
           ++ LLH  D         V+RSL RLE+V+NFTEFVKAFSQFGGEMVELAH+TG+R  DL
Sbjct: 56  VNQLLHAKD--------KVARSLGRLESVSNFTEFVKAFSQFGGEMVELAHLTGDRQNDL 107

Query: 104 KDERRRAQMSAARQVLERSTMLLLTSSKTCLRHPDSETARQNRDTVF 150
           KDERRRAQM+AARQVLERSTM+LLTSSKTCLRHP+  +A++NRDTVF
Sbjct: 108 KDERRRAQMAAARQVLERSTMMLLTSSKTCLRHPECPSAKENRDTVF 154

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332030215|gb|EGI69998.1| Alpha-catulin [Acromyrmex echinatior]

 Score =  133 bits (334), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 77/107 (71%), Positives = 90/107 (84%), Gaps = 8/107 (7%)

Query: 44  IDSLLHLVDPPSIDFRSTVSRSLCRLENVTNFTEFVKAFSQFGGEMVELAHVTGERGGDL 103
           ++ LLH  D         V+RSL RLE+V+NFTEFVKAFSQFGGEMVELAH+TG+R  DL
Sbjct: 120 VNQLLHAKD--------KVARSLGRLESVSNFTEFVKAFSQFGGEMVELAHLTGDRQNDL 171

Query: 104 KDERRRAQMSAARQVLERSTMLLLTSSKTCLRHPDSETARQNRDTVF 150
           KDERRRAQM+AARQVLERSTM+LLTSSKTCLRHP+  +A++NRDTVF
Sbjct: 172 KDERRRAQMAAARQVLERSTMMLLTSSKTCLRHPECPSAKENRDTVF 218

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350401125|ref|XP_003486055.1| PREDICTED: alpha-catulin-like isoform 3 [Bombus impatiens]

 Score =  131 bits (329), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 73/92 (79%), Positives = 84/92 (91%)

Query: 59  RSTVSRSLCRLENVTNFTEFVKAFSQFGGEMVELAHVTGERGGDLKDERRRAQMSAARQV 118
           +  V+RSL RLE+V+NFTEFVKAFSQFG EMVELAH+TG+R  DLKDERRRAQM+AARQV
Sbjct: 144 KKKVARSLGRLESVSNFTEFVKAFSQFGAEMVELAHLTGDRQNDLKDERRRAQMAAARQV 203

Query: 119 LERSTMLLLTSSKTCLRHPDSETARQNRDTVF 150
           LERSTM+LLTSSKTCLRHP+  +AR+NRDTVF
Sbjct: 204 LERSTMMLLTSSKTCLRHPECPSARENRDTVF 235

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340709563|ref|XP_003393375.1| PREDICTED: alpha-catulin-like isoform 3 [Bombus terrestris]

 Score =  131 bits (329), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 73/92 (79%), Positives = 84/92 (91%)

Query: 59  RSTVSRSLCRLENVTNFTEFVKAFSQFGGEMVELAHVTGERGGDLKDERRRAQMSAARQV 118
           +  V+RSL RLE+V+NFTEFVKAFSQFG EMVELAH+TG+R  DLKDERRRAQM+AARQV
Sbjct: 144 KKKVARSLGRLESVSNFTEFVKAFSQFGAEMVELAHLTGDRQNDLKDERRRAQMAAARQV 203

Query: 119 LERSTMLLLTSSKTCLRHPDSETARQNRDTVF 150
           LERSTM+LLTSSKTCLRHP+  +AR+NRDTVF
Sbjct: 204 LERSTMMLLTSSKTCLRHPECPSARENRDTVF 235

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340709561|ref|XP_003393374.1| PREDICTED: alpha-catulin-like isoform 2 [Bombus terrestris]

 Score =  130 bits (328), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 73/92 (79%), Positives = 84/92 (91%)

Query: 59  RSTVSRSLCRLENVTNFTEFVKAFSQFGGEMVELAHVTGERGGDLKDERRRAQMSAARQV 118
           +  V+RSL RLE+V+NFTEFVKAFSQFG EMVELAH+TG+R  DLKDERRRAQM+AARQV
Sbjct: 137 KKKVARSLGRLESVSNFTEFVKAFSQFGAEMVELAHLTGDRQNDLKDERRRAQMAAARQV 196

Query: 119 LERSTMLLLTSSKTCLRHPDSETARQNRDTVF 150
           LERSTM+LLTSSKTCLRHP+  +AR+NRDTVF
Sbjct: 197 LERSTMMLLTSSKTCLRHPECPSARENRDTVF 228

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	150
ZFIN|ZDB-GENE-060503-507	754	ctnnal1 "catenin (cadherin-ass	0.966	0.192	0.470	4.6e-26
UNIPROTKB|F1NMC0	722	CTNNAL1 "Uncharacterized prote	0.953	0.198	0.456	1.9e-25
UNIPROTKB|F1Q370	684	CTNNAL1 "Uncharacterized prote	0.633	0.138	0.589	9.3e-25
UNIPROTKB|F1PPY7	698	CTNNAL1 "Uncharacterized prote	0.633	0.136	0.589	9.8e-25
UNIPROTKB|E1BBP2	731	CTNNAL1 "Uncharacterized prote	0.613	0.125	0.597	1.1e-24
UNIPROTKB|F1SP25	720	CTNNAL1 "Uncharacterized prote	0.613	0.127	0.597	1.3e-24
UNIPROTKB|Q9UBT7	734	CTNNAL1 "Alpha-catulin" [Homo	0.633	0.129	0.578	2.9e-24
MGI|MGI:1859649	731	Ctnnal1 "catenin (cadherin ass	0.613	0.125	0.576	7.9e-24
RGD|1311434	731	Ctnnal1 "catenin (cadherin ass	0.613	0.125	0.576	1.7e-23
WB|WBGene00000832	820	ctn-1 [Caenorhabditis elegans	1.0	0.182	0.455	2.1e-23

ZFIN|ZDB-GENE-060503-507 ctnnal1 "catenin (cadherin-associated protein), alpha-like 1" [Danio rerio (taxid:7955)]

 Score = 304 (112.1 bits), Expect = 4.6e-26, P = 4.6e-26
 Identities = 71/151 (47%), Positives = 96/151 (63%)

Query:     6 TSALELTISMSLKMCSLSTHSRPAVNRCRLNRP--YCLDNIDSLLHLVD----PPSIDFR 59
             T   +LT   SL+ C     S    +R  + +     L ++  +L L D       I  R
Sbjct:    97 TGIAQLTDVSSLEHCDGDGRSTVFSDRTGMVKAARMLLSSVTKVLVLADCIVIKQIISSR 156

Query:    60 STVSRSLCRLENVTNFTEFVKAFSQFGGEMVELAHVTGERGGDLKDERRRAQMSAARQVL 119
             + V  +L +LE V+ F EFV+ FSQFG EMVE AH+TG+R  DLKDE++RA+M+AAR VL
Sbjct:   157 NKVLVTLEQLERVSTFQEFVQIFSQFGNEMVEFAHLTGDRQNDLKDEKKRARMAAARAVL 216

Query:   120 ERSTMLLLTSSKTCLRHPDSETARQNRDTVF 150
             E+ TM+LLT+SKTCLRHPD E+AR N++ VF
Sbjct:   217 EKCTMMLLTASKTCLRHPDCESARINKEAVF 247

GO:0005198 "structural molecule activity" evidence=IEA

GO:0007155 "cell adhesion" evidence=IEA

GO:0015629 "actin cytoskeleton" evidence=IEA

GO:0045296 "cadherin binding" evidence=IEA

UNIPROTKB|F1NMC0 CTNNAL1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 298 (110.0 bits), Expect = 1.9e-25, P = 1.9e-25
 Identities = 69/151 (45%), Positives = 95/151 (62%)

Query:     4 QITSALELTISMSLKMCSLSTHSRPAVNRCRLNRPYCLDNIDSLLHLVD----PPSIDFR 59
             Q+T    L    S    ++ T     V   RL     L ++  +L L D       I  R
Sbjct:    70 QLTDVASLDHPESDSHITIFTDKTGVVKAARL----LLSSVTKVLVLADRVVIKQIITSR 125

Query:    60 STVSRSLCRLENVTNFTEFVKAFSQFGGEMVELAHVTGERGGDLKDERRRAQMSAARQVL 119
             + V  ++ +LE V++F EFV+ FSQFG EMVE AH+TG+R  DLKDE+++A+M+A+R VL
Sbjct:   126 NKVLATMEQLEKVSSFQEFVQIFSQFGNEMVEFAHLTGDRQNDLKDEKKKARMAASRAVL 185

Query:   120 ERSTMLLLTSSKTCLRHPDSETARQNRDTVF 150
             E+ TM+LLT+SKTCLRHPD E+AR N+D VF
Sbjct:   186 EKCTMMLLTASKTCLRHPDCESARINKDGVF 216

GO:0005198 "structural molecule activity" evidence=IEA

GO:0007155 "cell adhesion" evidence=IEA

GO:0015629 "actin cytoskeleton" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0007266 "Rho protein signal transduction" evidence=IEA

UNIPROTKB|F1Q370 CTNNAL1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 291 (107.5 bits), Expect = 9.3e-25, P = 9.3e-25
 Identities = 56/95 (58%), Positives = 76/95 (80%)

Query:    56 IDFRSTVSRSLCRLENVTNFTEFVKAFSQFGGEMVELAHVTGERGGDLKDERRRAQMSAA 115
             I  R+ V  ++ RLE V +F EFV+ FSQFG EMVE AH+TG+R  DLKDE+++A+M+AA
Sbjct:   121 ITSRNKVLATMERLEKVNSFQEFVQIFSQFGNEMVEFAHLTGDRQNDLKDEKKKAKMAAA 180

Query:   116 RQVLERSTMLLLTSSKTCLRHPDSETARQNRDTVF 150
             R VLE+ TM+LLT+SKTCLRHP+ E+A +N++ VF
Sbjct:   181 RAVLEKCTMMLLTASKTCLRHPNCESAHKNKEGVF 215

GO:0015629 "actin cytoskeleton" evidence=IEA

GO:0007155 "cell adhesion" evidence=IEA

GO:0005198 "structural molecule activity" evidence=IEA

UNIPROTKB|F1PPY7 CTNNAL1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 291 (107.5 bits), Expect = 9.8e-25, P = 9.8e-25
 Identities = 56/95 (58%), Positives = 76/95 (80%)

Query:    56 IDFRSTVSRSLCRLENVTNFTEFVKAFSQFGGEMVELAHVTGERGGDLKDERRRAQMSAA 115
             I  R+ V  ++ RLE V +F EFV+ FSQFG EMVE AH+TG+R  DLKDE+++A+M+AA
Sbjct:   132 ITSRNKVLATMERLEKVNSFQEFVQIFSQFGNEMVEFAHLTGDRQNDLKDEKKKAKMAAA 191

Query:   116 RQVLERSTMLLLTSSKTCLRHPDSETARQNRDTVF 150
             R VLE+ TM+LLT+SKTCLRHP+ E+A +N++ VF
Sbjct:   192 RAVLEKCTMMLLTASKTCLRHPNCESAHKNKEGVF 226

GO:0015629 "actin cytoskeleton" evidence=IEA

GO:0007155 "cell adhesion" evidence=IEA

GO:0005198 "structural molecule activity" evidence=IEA

UNIPROTKB|E1BBP2 CTNNAL1 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 291 (107.5 bits), Expect = 1.1e-24, P = 1.1e-24
 Identities = 55/92 (59%), Positives = 75/92 (81%)

Query:    59 RSTVSRSLCRLENVTNFTEFVKAFSQFGGEMVELAHVTGERGGDLKDERRRAQMSAARQV 118
             R+ V  ++ RLE V +F EFV+ FSQFG EMVE AH+TG+R  DLKDE+++A+M+AAR V
Sbjct:   171 RNKVLATMERLEKVNSFQEFVQIFSQFGNEMVEFAHLTGDRQNDLKDEKKKAKMAAARSV 230

Query:   119 LERSTMLLLTSSKTCLRHPDSETARQNRDTVF 150
             LE+ TM+LLT+SKTCLRHP+ E+A +N++ VF
Sbjct:   231 LEKCTMMLLTASKTCLRHPNCESAHKNKEGVF 262

GO:0007266 "Rho protein signal transduction" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0045296 "cadherin binding" evidence=IEA

GO:0015629 "actin cytoskeleton" evidence=IEA

GO:0007155 "cell adhesion" evidence=IEA

GO:0005198 "structural molecule activity" evidence=IEA

UNIPROTKB|F1SP25 CTNNAL1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 290 (107.1 bits), Expect = 1.3e-24, P = 1.3e-24
 Identities = 55/92 (59%), Positives = 75/92 (81%)

Query:    59 RSTVSRSLCRLENVTNFTEFVKAFSQFGGEMVELAHVTGERGGDLKDERRRAQMSAARQV 118
             R+ V  ++ RLE V +F EFV+ FSQFG EMVE AH+TG+R  DLKDE+++A+M+AAR V
Sbjct:   171 RNKVLATMERLEKVNSFQEFVQIFSQFGNEMVEFAHLTGDRQNDLKDEKKKAKMAAARAV 230

Query:   119 LERSTMLLLTSSKTCLRHPDSETARQNRDTVF 150
             LE+ TM+LLT+SKTCLRHP+ E+A +N++ VF
Sbjct:   231 LEKCTMMLLTASKTCLRHPNCESAHKNKEGVF 262

GO:0007266 "Rho protein signal transduction" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0045296 "cadherin binding" evidence=IEA

GO:0015629 "actin cytoskeleton" evidence=IEA

GO:0007155 "cell adhesion" evidence=IEA

GO:0005198 "structural molecule activity" evidence=IEA

UNIPROTKB|Q9UBT7 CTNNAL1 "Alpha-catulin" [Homo sapiens (taxid:9606)]

 Score = 287 (106.1 bits), Expect = 2.9e-24, P = 2.9e-24
 Identities = 55/95 (57%), Positives = 76/95 (80%)

Query:    56 IDFRSTVSRSLCRLENVTNFTEFVKAFSQFGGEMVELAHVTGERGGDLKDERRRAQMSAA 115
             I  R+ V  ++ RLE V +F EFV+ FSQFG EMVE AH++G+R  DLKDE+++A+M+AA
Sbjct:   168 ITSRNKVLATMERLEKVNSFQEFVQIFSQFGNEMVEFAHLSGDRQNDLKDEKKKAKMAAA 227

Query:   116 RQVLERSTMLLLTSSKTCLRHPDSETARQNRDTVF 150
             R VLE+ TM+LLT+SKTCLRHP+ E+A +N++ VF
Sbjct:   228 RAVLEKCTMMLLTASKTCLRHPNCESAHKNKEGVF 262

GO:0005198 "structural molecule activity" evidence=IEA

GO:0007155 "cell adhesion" evidence=IEA

GO:0015629 "actin cytoskeleton" evidence=IEA

GO:0045296 "cadherin binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0005829 "cytosol" evidence=IDA

GO:0007266 "Rho protein signal transduction" evidence=IDA

MGI|MGI:1859649 Ctnnal1 "catenin (cadherin associated protein), alpha-like 1" [Mus musculus (taxid:10090)]

 Score = 283 (104.7 bits), Expect = 7.9e-24, P = 7.9e-24
 Identities = 53/92 (57%), Positives = 72/92 (78%)

Query:    59 RSTVSRSLCRLENVTNFTEFVKAFSQFGGEMVELAHVTGERGGDLKDERRRAQMSAARQV 118
             R+ +  ++ RLE V +F EFV+ FSQFG EMVE AH+TG+R  DLKDE+++A+M+ AR V
Sbjct:   170 RNKILATMERLEKVNSFQEFVQIFSQFGNEMVEFAHLTGDRQNDLKDEKKKARMAVARAV 229

Query:   119 LERSTMLLLTSSKTCLRHPDSETARQNRDTVF 150
             LE+ TM+LLT+SKTCLRHP  E+A  N++ VF
Sbjct:   230 LEKGTMMLLTASKTCLRHPSCESAHTNKEGVF 261

GO:0005198 "structural molecule activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005829 "cytosol" evidence=ISO

GO:0005856 "cytoskeleton" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0007155 "cell adhesion" evidence=IEA

GO:0007266 "Rho protein signal transduction" evidence=ISO

GO:0015629 "actin cytoskeleton" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0045296 "cadherin binding" evidence=IEA

RGD|1311434 Ctnnal1 "catenin (cadherin associated protein), alpha-like 1" [Rattus norvegicus (taxid:10116)]

 Score = 280 (103.6 bits), Expect = 1.7e-23, P = 1.7e-23
 Identities = 53/92 (57%), Positives = 73/92 (79%)

Query:    59 RSTVSRSLCRLENVTNFTEFVKAFSQFGGEMVELAHVTGERGGDLKDERRRAQMSAARQV 118
             R+ V  ++ RLE V +F EFV+ FSQFG EMVE A++TG+R  DLKDE+++A+M+ AR V
Sbjct:   170 RNKVLATMERLERVNSFQEFVQIFSQFGNEMVEFAYLTGDRQNDLKDEKKKARMAVARAV 229

Query:   119 LERSTMLLLTSSKTCLRHPDSETARQNRDTVF 150
             LE+ TM+LLT+SKTCLRHP  E+A +N++ VF
Sbjct:   230 LEKGTMMLLTASKTCLRHPSCESAHKNKEGVF 261

GO:0005198 "structural molecule activity" evidence=IEA

GO:0005829 "cytosol" evidence=IEA;ISO

GO:0007155 "cell adhesion" evidence=IEA

GO:0007266 "Rho protein signal transduction" evidence=IEA;ISO

GO:0015629 "actin cytoskeleton" evidence=IEA

GO:0045296 "cadherin binding" evidence=IEA

WB|WBGene00000832 ctn-1 [Caenorhabditis elegans (taxid:6239)]

 Score = 280 (103.6 bits), Expect = 2.1e-23, P = 2.1e-23
 Identities = 71/156 (45%), Positives = 94/156 (60%)

Query:     1 MNDQITSALELTISMSLKMCSLSTHSRPAVNRCRLNRP--YCLDNIDSLLHLVDPPSID- 57
             M D  T A     SM+   C+ +      V++  L R     L ++  +L L D   +  
Sbjct:   108 MYDACTEARLAGASMANLSCACNDDPNSVVDKAVLVRASRQLLSSVTRVLLLADRVLVKQ 167

Query:    58 -FRST--VSRSLCRLENVTNFTEFVKAFSQFGGEMVELAHVTGERGGDLKDERRRAQMSA 114
               R+   ++ SL RLE+  +F +FVK F+ FGGEMVELAH +G+R  DLK E+R+AQMS 
Sbjct:   168 VLRAEDKIAFSLSRLESTRSFNDFVKVFAVFGGEMVELAHRSGDRQHDLKSEKRKAQMSI 227

Query:   115 ARQVLERSTMLLLTSSKTCLRHPDSETARQNRDTVF 150
             AR  LER TMLLLT+SKT LRHPD ++A Q RD VF
Sbjct:   228 ARTSLERLTMLLLTASKTYLRHPDCDSALQCRDGVF 263

GO:0005198 "structural molecule activity" evidence=IEA

GO:0007155 "cell adhesion" evidence=IEA

GO:0015629 "actin cytoskeleton" evidence=IEA

GO:0045296 "cadherin binding" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0005886 "plasma membrane" evidence=IDA

GO:0040012 "regulation of locomotion" evidence=IMP

GO:0055120 "striated muscle dense body" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9UBT7	CTNL1_HUMAN	No assigned EC number	0.5789	0.6333	0.1294	yes	N/A
O88327	CTNL1_MOUSE	No assigned EC number	0.5760	0.6133	0.1258	yes	N/A
Q5RC06	CTNL1_PONAB	No assigned EC number	0.5789	0.6333	0.1294	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	150
pfam01044	850	pfam01044, Vinculin, Vinculin family	2e-13

>gnl|CDD|216263 pfam01044, Vinculin, Vinculin family

 Score = 66.3 bits (162), Expect = 2e-13
 Identities = 25/85 (29%), Positives = 41/85 (48%)

Query: 66  LCRLENVTNFTEFVKAFSQFGGEMVELAHVTGERGGDLKDERRRAQMSAARQVLERSTML 125
           L   E      + V+ +   G  M +L  +   R  +L  +  R  ++AAR  L++   +
Sbjct: 141 LAVAEVAETMEDLVQFYKDLGPNMTKLNKMVDRRQQELTHQVHRDILAAARDTLKKLAPI 200

Query: 126 LLTSSKTCLRHPDSETARQNRDTVF 150
           L+T+ K  +RHP  E AR+NRD   
Sbjct: 201 LITAMKIFVRHPGVEEARENRDYTA 225

Length = 850

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	150
KOG3681|consensus	835		100.0
PF01044	968	Vinculin: Vinculin family; InterPro: IPR006077 Vin	100.0
PF01044	968	Vinculin: Vinculin family; InterPro: IPR006077 Vin	95.81
PF08913	125	VBS: Vinculin Binding Site; InterPro: IPR015009 Vi	90.33

>KOG3681|consensus

Probab=100.00  E-value=8.8e-51  Score=371.11  Aligned_cols=150  Identities=38%  Similarity=0.524  Sum_probs=149.1

Q ss_pred             ChHHHHHHHHHhHHHHHhhhhhhcCCCcchhccccccc--hhhHHHhHHHhhcChh----hHhhHhHHHHHHhhHhhcCC
Q psy11519          1 MNDQITSALELTISMSLKMCSLSTHSRPAVNRCRLNRP--YCLDNIDSLLHLVDPP----SIDFRSTVSRSLCRLENVTN   74 (150)
Q Consensus         1 m~~A~~~v~~aG~~m~~aa~~f~~dp~s~~~R~~lvra--~lLs~vtrlLllaD~~----il~~~~~v~~~l~~~~~~~s   74 (150)
                      ||+||++|+++|+.|.+++++|.+||||+++|+.||+|  +||||||||||||||+    ||++|++|+++|+++++++|
T Consensus        74 m~~A~~~V~~~~~~m~~aa~~~~~Dp~s~~~R~~~i~aaR~LLsavtrlLllaD~~dV~~ii~~~~~V~~~l~~le~~~t  153 (835)
T KOG3681|consen   74 MPAALEEVRKAGDLMKQAAREFDDDPCSVPKRGNLIRAARGLLSAVTRLLLLADMVDVKKIIRSCKKVLETLEVLENVNT  153 (835)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhccCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence            89999999999999999999999999999999999999  9999999999999999    99999999999999999999


Q ss_pred             hHHHHHHHHHHhHHHHHHHHHHhhhhccCccHHHHHHHHHHHHHHHhhhHHHHHhhhhhhcCCCcHHHHhccccCC
Q psy11519         75 FTEFVKAFSQFGGEMVELAHVTGERGGDLKDERRRAQMSAARQVLERSTMLLLTSSKTCLRHPDSETARQNRDTVF  150 (150)
Q Consensus        75 ~~el~~~f~~f~~~m~~l~~~~~~Rq~dLk~~~~rd~l~aAr~~Lk~~~~~L~ts~kt~l~hp~~~~A~~nRd~v~  150 (150)
                      |+||+++|++|||+|++|++.+++||+|||||.|||+|++||+.||+++|||||||||||+||+++.+++||||+|
T Consensus       154 ~~dlv~~~k~lg~~m~~l~~~~~~RqqeLk~~~~rd~laaar~~lk~~~p~L~task~~lrhp~~~~a~~NRd~v~  229 (835)
T KOG3681|consen  154 MQDLVQIFKQLGPEMVKLAHMAGKRQQELKDPKHRDQLAAARAVLKKLAPMLLTASKTCLRHPNCESAKKNRDYVF  229 (835)
T ss_pred             HHHHHHHHHHHhHHHHHHHHHHHHHHHhhcChhhHHHHHHHHHHHHHHhHHHHHHHHHHHcCccHHHHHhhhhHHH
Confidence            9999999999999999999999999999999999999999999999999999999999999999999999999986

>PF01044 Vinculin: Vinculin family; InterPro: IPR006077 Vinculin is a eukaryotic protein that seems to be involved in the attachment of the actin-based microfilaments to the plasma membrane

Probab=100.00  E-value=9.8e-44  Score=335.56  Aligned_cols=150  Identities=40%  Similarity=0.525  Sum_probs=146.8

Q ss_pred             ChHHHHHHHHHhHHHHHhhhhhhcCCCcchhccccccc--hhhHHHhHHHhhcChh----hHhhHhHHHHHHhhHhhcCC
Q psy11519          1 MNDQITSALELTISMSLKMCSLSTHSRPAVNRCRLNRP--YCLDNIDSLLHLVDPP----SIDFRSTVSRSLCRLENVTN   74 (150)
Q Consensus         1 m~~A~~~v~~aG~~m~~aa~~f~~dp~s~~~R~~lvra--~lLs~vtrlLllaD~~----il~~~~~v~~~l~~~~~~~s   74 (150)
                      ||+||++|+.+|+.|..+++.|.+|||++++|+.||+|  +||++||||||+||++    ||+.+++|+++|+++++++|
T Consensus        72 M~~A~~~v~~ag~~l~~aa~~l~~dP~s~~~R~~lv~aar~lL~~vt~lLllaD~~~Vr~Ii~~~~~v~~~l~~~e~~~s  151 (968)
T PF01044_consen   72 MPEACEEVRDAGKNLLQAAQELRDDPCSSPKRKKLVRAARGLLSGVTRLLLLADMADVRKIIRACKKVLDYLERLESAES  151 (968)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHSTT-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGCT-SS
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            89999999999999999999999999999999999999  9999999999999999    99999999999999999999


Q ss_pred             hHHHHHHHHHHhHHHHHHHHHHhhhhccCccHHHHHHHHHHHHHHHhhhHHHHHhhhhhhcC---C--CcHHHHhccccC
Q psy11519         75 FTEFVKAFSQFGGEMVELAHVTGERGGDLKDERRRAQMSAARQVLERSTMLLLTSSKTCLRH---P--DSETARQNRDTV  149 (150)
Q Consensus        75 ~~el~~~f~~f~~~m~~l~~~~~~Rq~dLk~~~~rd~l~aAr~~Lk~~~~~L~ts~kt~l~h---p--~~~~A~~nRd~v  149 (150)
                      ++||+++|++||++|++|++++++||+||+||.||++|.+||++||+++||||||||+|++|   |  ++++|++||||+
T Consensus       152 ~~el~~~~~~f~~~~~~l~~~~~~Rq~eL~~~~~r~~l~~a~~~Lk~~~p~L~ts~k~~l~h~~~p~~~~~~a~~nRd~v  231 (968)
T PF01044_consen  152 MEELVQAFKDFGPEMVELAKLTGRRQQELKDPEHRDQLAAARAVLKKCSPMLLTSSKTYLRHPNDPGKEVEEARENRDYV  231 (968)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHCTBSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTSSTHHHHHHHHHHH
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            99999999999999999999999999999999999999999999999999999999999999   9  999999999998


Q ss_pred             C
Q psy11519        150 F  150 (150)
Q Consensus       150 ~  150 (150)
                      |
T Consensus       232 ~  232 (968)
T PF01044_consen  232 F  232 (968)
T ss_dssp             H
T ss_pred             c
Confidence            5

Vinculin is located at the cytoplasmic side of focal contacts or adhesion plaques []. In addition to actin, vinculin interacts with other structural proteins such as talin and alpha-actinins. Vinculin is a large protein of 116 kDa (about a 1000 residues). Structurally the protein consists of an acidic N-terminal domain of about 90 kDa separated from a basic C-terminal domain of about 25 kDa by a proline-rich region of about 50 residues. The central part of the N-terminal domain consists of a variable number (3 in vertebrates, 2 in Caenorhabditis elegans) of repeats of a 110 amino acids domain. Alpha-catenins are evolutionary related to vinculin IPR001033 from INTERPRO []. Catenins are proteins that associate with the cytoplasmic domain of a variety of cadherins. The association of catenins to cadherins produces a complex which is linked to the actin filament network, and which seems to be of primary importance for cadherins cell-adhesion properties. Three different types of catenins seem to exist: alpha, beta, and gamma. Alpha-catenins are proteins of about 100 kDa which are evolutionary related to vinculin. In terms of their structure the most significant differences are the absence, in alpha-catenin, of the repeated domain and of the proline-rich segment.; GO: 0005198 structural molecule activity, 0007155 cell adhesion, 0015629 actin cytoskeleton; PDB: 3S90_B 1TR2_B 2IBF_A 1RKC_A 3TJ5_A 3RF3_B 4DJ9_A 2GWW_A 2HSQ_A 3TJ6_A ....

>PF01044 Vinculin: Vinculin family; InterPro: IPR006077 Vinculin is a eukaryotic protein that seems to be involved in the attachment of the actin-based microfilaments to the plasma membrane

Probab=95.81  E-value=0.092  Score=51.11  Aligned_cols=141  Identities=16%  Similarity=0.140  Sum_probs=110.1

Q ss_pred             HHHHHHHHhHHHHHhhhhhhcCCCcchhccccccc--hhhHHHhHHHhhcChh-----hHhh-HhHHHHHHhh---Hhhc
Q psy11519          4 QITSALELTISMSLKMCSLSTHSRPAVNRCRLNRP--YCLDNIDSLLHLVDPP-----SIDF-RSTVSRSLCR---LENV   72 (150)
Q Consensus         4 A~~~v~~aG~~m~~aa~~f~~dp~s~~~R~~lvra--~lLs~vtrlLllaD~~-----il~~-~~~v~~~l~~---~~~~   72 (150)
                      +...++.-+.-+..|++.+..+|.+...+++|=-=  ..-..|.+|.-+.|.+     .|.. ...+.+.+..   .-..
T Consensus       555 aa~~l~~L~pqvi~Aa~~l~~~P~sk~A~e~le~~~~~W~~~v~~L~~~vd~i~d~~eFl~vSe~~i~~d~~~c~~Al~~  634 (968)
T PF01044_consen  555 AAEQLEKLTPQVINAARILAANPSSKAAKEHLEVFREAWEDAVEDLTEAVDEITDVDEFLAVSEEHILKDVDKCEKALRS  634 (968)
T ss_dssp             HHHHHHHHHHHHHHHHHHCTTSTTSHHHHHHHHHHHHHHHHHHHHHHHHHHCTS-HHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            45566677777788899999999998887777555  7778888888888877     2221 2333333333   3356


Q ss_pred             CChHHHHHHHHHHhHHHHHHHHHHhhhhccCccHHHHHHHHHHHHHHHhhhHHHHHhhhhhhcCCCcHHHHh
Q psy11519         73 TNFTEFVKAFSQFGGEMVELAHVTGERGGDLKDERRRAQMSAARQVLERSTMLLLTSSKTCLRHPDSETARQ  144 (150)
Q Consensus        73 ~s~~el~~~f~~f~~~m~~l~~~~~~Rq~dLk~~~~rd~l~aAr~~Lk~~~~~L~ts~kt~l~hp~~~~A~~  144 (150)
                      ++.+.|+..-..+......+...+.+-..--.||..|..+..+-..|++.+|-++..-|.+..+|....++.
T Consensus       635 ~d~~~~~~~a~~I~~ra~rV~~va~~e~dn~eDp~y~~~v~~a~~~L~~~i~~~v~~ak~va~n~~d~~a~~  706 (968)
T PF01044_consen  635 GDPQELDRAASSIAGRANRVIQVAKREMDNSEDPIYRNRVLEAIDQLEQAIPPMVAAAKEVATNPLDKNAQQ  706 (968)
T ss_dssp             T-HHHHHHHHHHHHHHHHHHHHHHHHHHHTS-SCHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTTTHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCcCCcchhh
Confidence            899999999999999999999999988888899999999999999999999999999999988876655543

Vinculin is located at the cytoplasmic side of focal contacts or adhesion plaques []. In addition to actin, vinculin interacts with other structural proteins such as talin and alpha-actinins. Vinculin is a large protein of 116 kDa (about a 1000 residues). Structurally the protein consists of an acidic N-terminal domain of about 90 kDa separated from a basic C-terminal domain of about 25 kDa by a proline-rich region of about 50 residues. The central part of the N-terminal domain consists of a variable number (3 in vertebrates, 2 in Caenorhabditis elegans) of repeats of a 110 amino acids domain. Alpha-catenins are evolutionary related to vinculin IPR001033 from INTERPRO []. Catenins are proteins that associate with the cytoplasmic domain of a variety of cadherins. The association of catenins to cadherins produces a complex which is linked to the actin filament network, and which seems to be of primary importance for cadherins cell-adhesion properties. Three different types of catenins seem to exist: alpha, beta, and gamma. Alpha-catenins are proteins of about 100 kDa which are evolutionary related to vinculin. In terms of their structure the most significant differences are the absence, in alpha-catenin, of the repeated domain and of the proline-rich segment.; GO: 0005198 structural molecule activity, 0007155 cell adhesion, 0015629 actin cytoskeleton; PDB: 3S90_B 1TR2_B 2IBF_A 1RKC_A 3TJ5_A 3RF3_B 4DJ9_A 2GWW_A 2HSQ_A 3TJ6_A ....

>PF08913 VBS: Vinculin Binding Site; InterPro: IPR015009 Vinculin binding sites are predominantly found in talin and talin-like molecules, enabling binding of vinculin to talin, stabilising integrin-mediated cell-matrix junctions

Probab=90.33  E-value=5.3  Score=30.07  Aligned_cols=89  Identities=15%  Similarity=0.162  Sum_probs=73.0

Q ss_pred             hHhhHhHHHHHHhhHh--hcCChHHHHHHHHHHhHHHHHHHHHHhhhhccCccHHHHHHHHHHHHHHHhhhHHHHHhhhh
Q psy11519         55 SIDFRSTVSRSLCRLE--NVTNFTEFVKAFSQFGGEMVELAHVTGERGGDLKDERRRAQMSAARQVLERSTMLLLTSSKT  132 (150)
Q Consensus        55 il~~~~~v~~~l~~~~--~~~s~~el~~~f~~f~~~m~~l~~~~~~Rq~dLk~~~~rd~l~aAr~~Lk~~~~~L~ts~kt  132 (150)
                      |++.++.+..+-..|.  +..+++||...=++|+.+-.+|+..+..=..-+.+++-..+|..+-..|=..+.=|+.+.+.
T Consensus         9 mv~~ak~ia~~a~emv~ks~~~p~eL~~la~~lt~~y~~La~~~~~aaat~~~~ev~~~i~~~vq~LG~sc~~Lv~aag~   88 (125)
T PF08913_consen    9 MVEAAKEIARTAQEMVTKSRTNPEELGTLANDLTHDYSQLAQDAKGAAATTPSAEVQNRIKSAVQDLGMSCIELVQAAGA   88 (125)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhCc
Confidence            6677777777776665  45788899999999999999999988887888889999999999999999999999999999


Q ss_pred             hhcCCCcHHHH
Q psy11519        133 CLRHPDSETAR  143 (150)
Q Consensus       133 ~l~hp~~~~A~  143 (150)
                      +=-||+.+.++
T Consensus        89 ~~~~P~d~~~k   99 (125)
T PF08913_consen   89 VQSNPSDPYAK   99 (125)
T ss_dssp             HHH-TT-HHHH
T ss_pred             CCCCCCchhHH
Confidence            98899877654

Talin, in turn, links integrins to the actin cytoskeleton. The consensus sequence for Vinculin binding sites is LxxAAxxVAxxVxxLIxxA, with a secondary structure prediction of four amphipathic helices. The hydrophobic residues that define the VBS are themselves 'masked' and are buried in the core of a series of helical bundles that make up the talin rod []. ; PDB: 2L10_A 2KVP_A 2B0H_A 1RKC_B 1XWJ_B.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	150
1dov_A	181	Crystal Structure Of The Alpha-Catenin Dimerization		1e-09
1dow_A	205	Crystal Structure Of A Chimera Of Beta-Catenin And		2e-08
4igg_A	832	Full-Length Human Alpha-Catenin Crystal Structure L		2e-08

>pdb|1DOV|A Chain A, Crystal Structure Of The Alpha-Catenin Dimerization Domain Length = 181

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 49/90 (54%)
Query: 61  TVSRSLCRLENVTNFTEFVKAFSQFGGEMVELAHVTGERGGDLKDERRRAQMSAARQVLE 120
            V   + +L N  N  +    +     E+ +L  +  +R  +LKD   R QM+AAR +L+
Sbjct: 75  VVEDGILKLRNAGNEQDLGIQYKALKPEVDKLNIMAAKRQQELKDVGNRDQMAAARGILQ 134
Query: 121 RSTMLLLTSSKTCLRHPDSETARQNRDTVF 150
           ++  +L T+S+ CL+HPD    + NRD ++
Sbjct: 135 KNVPILYTASQACLQHPDVAAYKANRDLIY 164

>pdb|1DOW|A Chain A, Crystal Structure Of A Chimera Of Beta-Catenin And Alpha- Catenin Length = 205

Iteration: 1
 Score = 55.1 bits (131), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 47/90 (52%)
Query: 61  TVSRSLCRLENVTNFTEFVKAFSQFGGEMVELAHVTGERGGDLKDERRRAQMSAARQVLE 120
            V   + +L N  N  +    +     E+ +L     +R  +LKD   R Q +AAR +L+
Sbjct: 100 VVEDGILKLRNAGNEQDLGIQYKALKPEVDKLNIXAAKRQQELKDVGNRDQXAAARGILQ 159
Query: 121 RSTMLLLTSSKTCLRHPDSETARQNRDTVF 150
           ++  +L T+S+ CL+HPD    + NRD ++
Sbjct: 160 KNVPILYTASQACLQHPDVAAYKANRDLIY 189

>pdb|4IGG|A Chain A, Full-Length Human Alpha-Catenin Crystal Structure Length = 832

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/89 (31%), Positives = 49/89 (55%)
Query: 62  VSRSLCRLENVTNFTEFVKAFSQFGGEMVELAHVTGERGGDLKDERRRAQMSAARQVLER 121
           V   + +L N  N  +    +     E+ +L  +  +R  +LKD   R QM+AAR +L++
Sbjct: 76  VEDGILKLRNAGNEQDLGIQYKALKPEVDKLNIMAAKRQQELKDVGHRDQMAAARGILQK 135
Query: 122 STMLLLTSSKTCLRHPDSETARQNRDTVF 150
           +  +L T+S+ CL+HPD    + NRD ++
Sbjct: 136 NVPILYTASQACLQHPDVAAYKANRDLIY 164

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	150
1dow_A	205	Alpha-catenin; four-helix bundle, cell adhesion; 1	1e-27
3rf3_A	258	Vinculin, metavinculin; alpha-helix bundle domain,	4e-24
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	7e-04

>1dow_A Alpha-catenin; four-helix bundle, cell adhesion; 1.80A {Mus musculus} SCOP: a.24.9.1 PDB: 1dov_A Length = 205

 Score =  100 bits (251), Expect = 1e-27
 Identities = 33/115 (28%), Positives = 56/115 (48%), Gaps = 4/115 (3%)

Query: 40  CLDNIDSLLHLVDPPS----IDFRSTVSRSLCRLENVTNFTEFVKAFSQFGGEMVELAHV 95
            L  +  LL L D       +     V   + +L N  N  +    +     E+ +L  +
Sbjct: 75  LLSAVTRLLILADMADVYKLLVQLKVVEDGILKLRNAGNEQDLGIQYKALKPEVDKLNIM 134

Query: 96  TGERGGDLKDERRRAQMSAARQVLERSTMLLLTSSKTCLRHPDSETARQNRDTVF 150
             +R  +LKD   R QM+AAR +L+++  +L T+S+ CL+HPD    + NRD ++
Sbjct: 135 AAKRQQELKDVGNRDQMAAARGILQKNVPILYTASQACLQHPDVAAYKANRDLIY 189

>3rf3_A Vinculin, metavinculin; alpha-helix bundle domain, cytoskeletal protein, protein-Pro interactions, cell adhesion, cytoskeleton; 1.61A {Homo sapiens} PDB: 4dj9_A 1rke_A 1rkc_A 1syq_A 1ydi_A 2gww_A 2hsq_A 2ibf_A 3tj6_A 2gdc_A 3tj5_A 1u6h_A 1xwj_A 1zvz_A 1zw2_A 1zw3_A 3s90_A 4ehp_A 1t01_A Length = 258

 Score = 92.9 bits (230), Expect = 4e-24
 Identities = 18/100 (18%), Positives = 38/100 (38%), Gaps = 5/100 (5%)

Query: 56  IDFRSTVSRSLCRLENVTNFTEFVKAFSQFGGEMVELAHVTGERGGDLKDERRRAQMSAA 115
           I     +   L   E V    + V      G  M ++A +  ER  +L  +  R  +  +
Sbjct: 135 IRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQELTHQEHRVMLVNS 194

Query: 116 RQVLERSTMLLLTSSKTCL-----RHPDSETARQNRDTVF 150
              ++    +L+++ K  +     ++   E A +NR+   
Sbjct: 195 MNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTV 234

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 37.9 bits (87), Expect = 7e-04
 Identities = 29/163 (17%), Positives = 54/163 (33%), Gaps = 36/163 (22%)

Query: 11  LTISMSLKMCSLSTHSRPAVNRCRLNRPYCLDNIDSLLHLVDPPSID--FRSTVSRSLCR 68
           + + + +K+ +     R  V+   + + +  D++        PP +D  F S +   L  
Sbjct: 431 IYLELKVKLENEYALHRSIVDHYNIPKTFDSDDL-------IPPYLDQYFYSHIGHHLKN 483

Query: 69  LENVTNFTEFVKAFSQFGGEMVELAHVT---GERGG------DLK---------DERRRA 110
           +E+    T F   F  F     ++ H +      G        LK         D +   
Sbjct: 484 IEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYER 543

Query: 111 QMSAARQVLERSTMLLLTSSKTC-----LRHPDS----ETARQ 144
            ++A    L +    L+ S  T      L   D     E  +Q
Sbjct: 544 LVNAILDFLPKIEENLICSKYTDLLRIALMAEDEAIFEEAHKQ 586

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	150
1dow_A	205	Alpha-catenin; four-helix bundle, cell adhesion; 1	100.0
3rf3_A	258	Vinculin, metavinculin; alpha-helix bundle domain,	100.0
4igg_A	832	Catenin alpha-1; asymmetric dimer, adherens juncti	100.0
1tr2_A	1066	Vinculin isoform 1; actin-binding, cell adhesion;	99.96
1h6g_A	256	Alpha-1 catenin; adhesion modulation, cytoskeleton	97.57
1u89_A	139	Talin 1, talin; 4-helix bundle, LEFT-handed, struc	96.3
2l7a_A	131	Talin-1; vinculin, bundle, focal adhesion, integri	96.22
1h6g_A	256	Alpha-1 catenin; adhesion modulation, cytoskeleton	95.57
4igg_A	832	Catenin alpha-1; asymmetric dimer, adherens juncti	95.08
1tr2_A	1066	Vinculin isoform 1; actin-binding, cell adhesion;	94.27
2b0h_A	137	Talin-1; vinculin, helical bundle, VBS, structural	87.03
3dyj_A	332	Talin-1; helix bundles, cytoskeletal protein, inte	86.59
2kvp_A	165	Talin-1; VBS, vinculin, helical bundle, cytoplasm,	84.07
2x0c_A	309	Talin-1; cytoskeleton, cell membrane, actin, synem	83.72

>1dow_A Alpha-catenin; four-helix bundle, cell adhesion; 1.80A {Mus musculus} SCOP: a.24.9.1 PDB: 1dov_A

Probab=100.00  E-value=9.8e-58  Score=365.90  Aligned_cols=150  Identities=25%  Similarity=0.354  Sum_probs=149.1

Q ss_pred             ChHHHHHHHHHhHHHHHhhhhhhcCCCcchhccccccc--hhhHHHhHHHhhcChh----hHhhHhHHHHHHhhHhhcCC
Q psy11519          1 MNDQITSALELTISMSLKMCSLSTHSRPAVNRCRLNRP--YCLDNIDSLLHLVDPP----SIDFRSTVSRSLCRLENVTN   74 (150)
Q Consensus         1 m~~A~~~v~~aG~~m~~aa~~f~~dp~s~~~R~~lvra--~lLs~vtrlLllaD~~----il~~~~~v~~~l~~~~~~~s   74 (150)
                      ||+||++|+++|+.|..++++|..||||.++|+.||+|  +||+|||||||+||++    |++++++|+++|+++++++|
T Consensus        34 M~~A~~~v~~ag~~l~~a~~~~~~dP~s~~~R~~lV~aaR~lLs~vtrlLllaD~~~Vrkil~~~~~v~~~L~~le~~~s  113 (205)
T 1dow_A           34 LVVAVEDVRKQGDLMKSAAGEFADDPCSSVKRGNMVRAARALLSAVTRLLILADMADVYKLLVQLKVVEDGILKLRNAGN  113 (205)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSS
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhccCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            89999999999999999999999999999999999999  9999999999999999    99999999999999999999


Q ss_pred             hHHHHHHHHHHhHHHHHHHHHHhhhhccCccHHHHHHHHHHHHHHHhhhHHHHHhhhhhhcCCCcHHHHhccccCC
Q psy11519         75 FTEFVKAFSQFGGEMVELAHVTGERGGDLKDERRRAQMSAARQVLERSTMLLLTSSKTCLRHPDSETARQNRDTVF  150 (150)
Q Consensus        75 ~~el~~~f~~f~~~m~~l~~~~~~Rq~dLk~~~~rd~l~aAr~~Lk~~~~~L~ts~kt~l~hp~~~~A~~nRd~v~  150 (150)
                      |+||+++|++||++|.+|++++++||+|||||.|||+|++||++||+++||||||||+||+||++++|++||||+|
T Consensus       114 ~~el~~~f~~f~~~m~~l~~l~~~Rq~dLk~~~~rd~l~aAr~~Lk~~sp~L~ta~k~~lrhp~~~~a~~nRd~v~  189 (205)
T 1dow_A          114 EQDLGIQYKALKPEVDKLNIMAAKRQQELKDVGNRDQMAAARGILQKNVPILYTASQACLQHPDVAAYKANRDLIY  189 (205)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhhHHHHHHHHHHhcCCCCHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999999999999999999999999999999986

>3rf3_A Vinculin, metavinculin; alpha-helix bundle domain, cytoskeletal protein, protein-Pro interactions, cell adhesion, cytoskeleton; 1.61A {Homo sapiens} PDB: 4dj9_A 1rke_A 1rkc_A 1syq_A 1ydi_A 2gww_A 2hsq_A 2ibf_A 3tj6_A 2gdc_A 4e17_A 4e18_A 3tj5_A 1u6h_A 1xwj_A 1zvz_A 1zw2_A 1zw3_A 3s90_A 4ehp_A ...

Probab=100.00  E-value=2.9e-52  Score=343.80  Aligned_cols=150  Identities=17%  Similarity=0.176  Sum_probs=148.9

Q ss_pred             ChHHHHHHHHHhHHHHHhhhhhhcCCCcchhccccccc--hhhHHHhHHHhhcChh----hHhhHhHHHHHHhhHhhcCC
Q psy11519          1 MNDQITSALELTISMSLKMCSLSTHSRPAVNRCRLNRP--YCLDNIDSLLHLVDPP----SIDFRSTVSRSLCRLENVTN   74 (150)
Q Consensus         1 m~~A~~~v~~aG~~m~~aa~~f~~dp~s~~~R~~lvra--~lLs~vtrlLllaD~~----il~~~~~v~~~l~~~~~~~s   74 (150)
                      ||+||++|+++|+.|..++++|.+|||++++|+.||+|  +||++||||||+||++    |+.++++|+++|+++++++|
T Consensus        74 M~~A~~~v~~ag~~l~~aa~~~~~dP~s~~~R~~lV~aAR~lLs~vtrlLllaD~~dVr~il~~~~~v~~~l~~l~~~~~  153 (258)
T 3rf3_A           74 MPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTSDLLLTFDEAEVRKIIRVCKGILEYLTVAEVVET  153 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGGCCS
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            89999999999999999999999999999999999999  9999999999999999    99999999999999999999


Q ss_pred             hHHHHHHHHHHhHHHHHHHHHHhhhhccCccHHHHHHHHHHHHHHHhhhHHHHHhhhhhhcC-----CCcHHHHhccccC
Q psy11519         75 FTEFVKAFSQFGGEMVELAHVTGERGGDLKDERRRAQMSAARQVLERSTMLLLTSSKTCLRH-----PDSETARQNRDTV  149 (150)
Q Consensus        75 ~~el~~~f~~f~~~m~~l~~~~~~Rq~dLk~~~~rd~l~aAr~~Lk~~~~~L~ts~kt~l~h-----p~~~~A~~nRd~v  149 (150)
                      ++||+++|++||++|++|++++++||+|||||.||++|++||++||+++||||||||+|++|     |++++|++||||+
T Consensus       154 ~~el~~~~~~f~~~~~~L~~~~~~Rq~eL~~~~~r~~l~~Ar~~Lk~~~p~L~ta~k~~lrh~~~~~~~~~~a~~nRd~v  233 (258)
T 3rf3_A          154 MEDLVTYTKNLGPGMTKMAKMIDERQQELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFT  233 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHTTBSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCcHHHHHhHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999     9999999999998


Q ss_pred             C
Q psy11519        150 F  150 (150)
Q Consensus       150 ~  150 (150)
                      |
T Consensus       234 ~  234 (258)
T 3rf3_A          234 V  234 (258)
T ss_dssp             H
T ss_pred             H
Confidence            5

>4igg_A Catenin alpha-1; asymmetric dimer, adherens junctions, F-actin binding, cell; 3.66A {Homo sapiens}

Probab=100.00  E-value=1.4e-48  Score=362.39  Aligned_cols=150  Identities=25%  Similarity=0.362  Sum_probs=149.1

Q ss_pred             ChHHHHHHHHHhHHHHHhhhhhhcCCCcchhccccccc--hhhHHHhHHHhhcChh----hHhhHhHHHHHHhhHhhcCC
Q psy11519          1 MNDQITSALELTISMSLKMCSLSTHSRPAVNRCRLNRP--YCLDNIDSLLHLVDPP----SIDFRSTVSRSLCRLENVTN   74 (150)
Q Consensus         1 m~~A~~~v~~aG~~m~~aa~~f~~dp~s~~~R~~lvra--~lLs~vtrlLllaD~~----il~~~~~v~~~l~~~~~~~s   74 (150)
                      ||+||++|+++|++|..++++|.+|||++++|+.||+|  +||++|||||||||++    ||..+++|+++|+++++++|
T Consensus         9 M~~A~~~v~~ag~~l~~aa~~l~~DP~s~~~R~~lV~aAR~LLs~vTrLLllaD~~~VrkIi~~~~~Vl~~L~~le~v~s   88 (832)
T 4igg_A            9 LVAAVEDVRKQGDLMKAAAGEFADDPCSSVKRGNMVRAARALLSAVTRLLILADMADVYKLLVQLKVVEDGILKLRNAGN   88 (832)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCS
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            89999999999999999999999999999999999999  9999999999999999    99999999999999999999


Q ss_pred             hHHHHHHHHHHhHHHHHHHHHHhhhhccCccHHHHHHHHHHHHHHHhhhHHHHHhhhhhhcCCCcHHHHhccccCC
Q psy11519         75 FTEFVKAFSQFGGEMVELAHVTGERGGDLKDERRRAQMSAARQVLERSTMLLLTSSKTCLRHPDSETARQNRDTVF  150 (150)
Q Consensus        75 ~~el~~~f~~f~~~m~~l~~~~~~Rq~dLk~~~~rd~l~aAr~~Lk~~~~~L~ts~kt~l~hp~~~~A~~nRd~v~  150 (150)
                      |+||+++|++||++|++|++++++||+|||||.||++|++||++||+++||||||||+||+||++++|++||||||
T Consensus        89 ~~eLv~~f~~f~~~m~eL~~lt~~Rq~dLk~~~~R~~L~aAr~~Lk~~spmLlta~Kt~lrhp~~~~A~~nRd~v~  164 (832)
T 4igg_A           89 EQDLGIQYKALKPEVDKLNIMAAKRQQELKDVGHRDQMAAARGILQKNVPILYTASQACLQHPDVAAYKANRDLIY  164 (832)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999999999999999999999999999999986

>1tr2_A Vinculin isoform 1; actin-binding, cell adhesion; 2.90A {Homo sapiens} PDB: 1st6_A

Probab=99.96  E-value=3.4e-30  Score=244.03  Aligned_cols=150  Identities=17%  Similarity=0.180  Sum_probs=147.3

Q ss_pred             ChHHHHHHHHHhHHHHHhhhhhhcCCCcchhccccccc--hhhHHHhHHHhhcChh----hHhhHhHHHHHHhhHhhcCC
Q psy11519          1 MNDQITSALELTISMSLKMCSLSTHSRPAVNRCRLNRP--YCLDNIDSLLHLVDPP----SIDFRSTVSRSLCRLENVTN   74 (150)
Q Consensus         1 m~~A~~~v~~aG~~m~~aa~~f~~dp~s~~~R~~lvra--~lLs~vtrlLllaD~~----il~~~~~v~~~l~~~~~~~s   74 (150)
                      ||+||++|+.+|..|..+++.|..||+++++|+.||+|  +||++|++||++||++    |+..|++|+++|+.++++++
T Consensus        74 m~~A~~~v~~a~s~L~~aak~l~~dp~s~~~r~~Li~aAR~vl~sv~~LL~~~D~a~v~kl~~a~~~v~~~L~~~~~~~~  153 (1066)
T 1tr2_A           74 MPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTSDLLLTFDEAEVRKIIRVCKGILEYLTVAEVVET  153 (1066)
T ss_dssp             HHHHHHHHHHHHTTHHHHHHHHHHCTTCTTTTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGCCS
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            79999999999999999999999999999999999999  9999999999999999    89999999999999999999


Q ss_pred             hHHHHHHHHHHhHHHHHHHHHHhhhhccCccHHHHHHHHHHHHHHHhhhHHHHHhhhhhhc--C---CCcHHHHhccccC
Q psy11519         75 FTEFVKAFSQFGGEMVELAHVTGERGGDLKDERRRAQMSAARQVLERSTMLLLTSSKTCLR--H---PDSETARQNRDTV  149 (150)
Q Consensus        75 ~~el~~~f~~f~~~m~~l~~~~~~Rq~dLk~~~~rd~l~aAr~~Lk~~~~~L~ts~kt~l~--h---p~~~~A~~nRd~v  149 (150)
                      ++||+++||+||++|.+|++.+++||+||+|+.+|++|.+|+..|++++|+|++|+|+|++  |   |++++|++||+|+
T Consensus       154 ~~elv~~~k~l~~~m~~l~~~~~~r~~~l~d~~~r~~L~~A~~~L~~~~~~L~~a~k~~~~~~~~~~~~~~~A~~~r~~~  233 (1066)
T 1tr2_A          154 MEDLVTYTKNLGPGMTKMAKMIDERQQELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFT  233 (1066)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHHHHHHTBSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCCCCcccHHHHHhhhHH
Confidence            9999999999999999999999999999999999999999999999999999999999999  6   8999999999997


Q ss_pred             C
Q psy11519        150 F  150 (150)
Q Consensus       150 ~  150 (150)
                      |
T Consensus       234 ~  234 (1066)
T 1tr2_A          234 V  234 (1066)
T ss_dssp             H
T ss_pred             H
Confidence            4

>1h6g_A Alpha-1 catenin; adhesion modulation, cytoskeleton; 2.2A {Homo sapiens} SCOP: a.24.9.1 a.24.9.1 PDB: 1l7c_A

Probab=97.57  E-value=0.0013  Score=53.30  Aligned_cols=138  Identities=8%  Similarity=0.052  Sum_probs=109.6

Q ss_pred             HHHHHHHHhHHHHHhhhhhhcCCCcchhccccccc--hhhHHHhHHHhhcChh------hHhhHhHHHHHH---hhHhhc
Q psy11519          4 QITSALELTISMSLKMCSLSTHSRPAVNRCRLNRP--YCLDNIDSLLHLVDPP------SIDFRSTVSRSL---CRLENV   72 (150)
Q Consensus         4 A~~~v~~aG~~m~~aa~~f~~dp~s~~~R~~lvra--~lLs~vtrlLllaD~~------il~~~~~v~~~l---~~~~~~   72 (150)
                      |...++..+.-+..+++.+...|.|...+++|--.  ..-..|..|.-++|.+      |--+...+.++.   ...-..
T Consensus        77 aa~~~~~l~pQvv~aar~l~~~p~s~~a~E~l~~~~~~w~~~v~~L~~~vd~~~~~~~fl~ase~~i~~~~~~c~~al~~  156 (256)
T 1h6g_A           77 SASQLEALCPQVINAALALAAKPQSKLAQENMDLFKEQWEKQVRVLTDAVDDITSIDDFLAVSENHILEDVNKCVIALQE  156 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHhHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHc
Confidence            44556777777889999999999999999999666  6677777777777766      112222222222   233477


Q ss_pred             CChHHHHHHHHHHhHHHHHHHHHHhhhhccCccHHHHHHHHHHHHHHHhh-hHHHHHhhhhh----hcCCCcHH
Q psy11519         73 TNFTEFVKAFSQFGGEMVELAHVTGERGGDLKDERRRAQMSAARQVLERS-TMLLLTSSKTC----LRHPDSET  141 (150)
Q Consensus        73 ~s~~el~~~f~~f~~~m~~l~~~~~~Rq~dLk~~~~rd~l~aAr~~Lk~~-~~~L~ts~kt~----l~hp~~~~  141 (150)
                      ++.++++...+.+......+...+..-..--.||..|+.+..|-..|... +|-+..+.|.|    -.+|+.+.
T Consensus       157 ~d~~~~~~~a~~i~~~a~rv~~v~k~e~d~~ed~~~~~~v~~a~~~L~~a~~p~mv~~ak~~~~~~a~np~d~~  230 (256)
T 1h6g_A          157 KDVDGLDRTAGAIRGRAARVIHVVTSEMDNYEPGVYTEKVLEATKLLSNTVMPRFTEQVEAAVEALSSDPAQPM  230 (256)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHHHHHTTTSCSSHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSSCCCC
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHhhcCCCCHH
Confidence            88999999999999999999999998888889999999999999999997 99999999998    77887644

>1u89_A Talin 1, talin; 4-helix bundle, LEFT-handed, structural protein; NMR {Mus musculus} SCOP: a.216.1.1

Probab=96.30  E-value=0.037  Score=41.47  Aligned_cols=74  Identities=18%  Similarity=0.270  Sum_probs=67.3

Q ss_pred             HhhcCChHHHHHHHHHHhHHHHHHHHHHhhhhccCccHHHHHHHHHHHHHHHhhhHHHHHhhhhhhcCCCcHHH
Q psy11519         69 LENVTNFTEFVKAFSQFGGEMVELAHVTGERGGDLKDERRRAQMSAARQVLERSTMLLLTSSKTCLRHPDSETA  142 (150)
Q Consensus        69 ~~~~~s~~el~~~f~~f~~~m~~l~~~~~~Rq~dLk~~~~rd~l~aAr~~Lk~~~~~L~ts~kt~l~hp~~~~A  142 (150)
                      +.+..+.+|.++..+.++.....|-+........-.||.+|+.|..|=..|-..+.-|+=+.|-|-.||++++.
T Consensus        63 ~~s~gd~~eMvrqak~Laqat~~LV~~iK~eAe~~~D~~~q~rLL~AAk~lAdATa~mVeAAk~~a~nP~~~~~  136 (139)
T 1u89_A           63 FSSMGDAGEMVRQARILAQATSDLVNAIKADAEGESDLENSRKLLSAAKILADATAKMVEAAKGAAAHPDSEEQ  136 (139)
T ss_dssp             HHTTTTSHHHHHHHHHHHHHHHHHHHHHHHHGGGCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSCCSSCC
T ss_pred             HHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhh
Confidence            34566788999999999999999999999999999999999999999999999999999999999999998654

>2l7a_A Talin-1; vinculin, bundle, focal adhesion, integrin, cell ADHE; NMR {Mus musculus}

Probab=96.22  E-value=0.084  Score=39.09  Aligned_cols=75  Identities=19%  Similarity=0.276  Sum_probs=66.5

Q ss_pred             hhcCChHHHHHHHHHHhHHHHHHHHHHhhhhccCccHHHHHHHHHHHHHHHhhhHHHHHhhhhhhcCCCcHHHHh
Q psy11519         70 ENVTNFTEFVKAFSQFGGEMVELAHVTGERGGDLKDERRRAQMSAARQVLERSTMLLLTSSKTCLRHPDSETARQ  144 (150)
Q Consensus        70 ~~~~s~~el~~~f~~f~~~m~~l~~~~~~Rq~dLk~~~~rd~l~aAr~~Lk~~~~~L~ts~kt~l~hp~~~~A~~  144 (150)
                      -+-.+.++.+...+.++.....|-.........-.||..|+.|..|=..|-..++=|.=+.|.|-.||++++++.
T Consensus        34 ~s~~~p~~Mv~~ak~iAr~a~~Li~~~K~eAd~seDp~~~~rLl~AAk~La~At~~MVeaAK~~A~NP~d~~~q~  108 (131)
T 2l7a_A           34 SSMGDAGEMVRQARILAQATSDLVNAIKADAEGESDLENSRKLLSAAKILADATAKMVEAAKGAAAHPDSEEQQQ  108 (131)
T ss_dssp             HHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCHHHHH
T ss_pred             HhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHH
Confidence            456778899999999999998888877777778899999999999999999999999999999999999976543

>1h6g_A Alpha-1 catenin; adhesion modulation, cytoskeleton; 2.2A {Homo sapiens} SCOP: a.24.9.1 a.24.9.1 PDB: 1l7c_A

Probab=95.57  E-value=0.17  Score=40.69  Aligned_cols=68  Identities=16%  Similarity=0.277  Sum_probs=58.3

Q ss_pred             hHHHHHHHHHHhHHHHHHHHHHhhhhccCccHHHHHHHHHHHHHHHhhhHHHHHhhhhhhcCCCcHHHHhc
Q psy11519         75 FTEFVKAFSQFGGEMVELAHVTGERGGDLKDERRRAQMSAARQVLERSTMLLLTSSKTCLRHPDSETARQN  145 (150)
Q Consensus        75 ~~el~~~f~~f~~~m~~l~~~~~~Rq~dLk~~~~rd~l~aAr~~Lk~~~~~L~ts~kt~l~hp~~~~A~~n  145 (150)
                      +.+....|.++...|.+.++++..   -=.||.....+..|-..++..+|-++++.|+...||++..|++|
T Consensus        40 ~~~~~~~f~~~~~~l~~~aklva~---~s~~~~~~~~v~~aa~~~~~l~pQvv~aar~l~~~p~s~~a~E~  107 (256)
T 1h6g_A           40 VKEYAQVFREHANKLIEVANLACS---ISNNEEGVKLVRMSASQLEALCPQVINAALALAAKPQSKLAQEN  107 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHT---TCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH---hCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCCHHHHHH
Confidence            455667778888888888888765   33589999999999999999999999999999999999999887

>4igg_A Catenin alpha-1; asymmetric dimer, adherens junctions, F-actin binding, cell; 3.66A {Homo sapiens}

Probab=95.08  E-value=0.45  Score=44.56  Aligned_cols=70  Identities=16%  Similarity=0.271  Sum_probs=61.5

Q ss_pred             CChHHHHHHHHHHhHHHHHHHHHHhhhhccCccHHHHHHHHHHHHHHHhhhHHHHHhhhhhhcCCCcHHHHhc
Q psy11519         73 TNFTEFVKAFSQFGGEMVELAHVTGERGGDLKDERRRAQMSAARQVLERSTMLLLTSSKTCLRHPDSETARQN  145 (150)
Q Consensus        73 ~s~~el~~~f~~f~~~m~~l~~~~~~Rq~dLk~~~~rd~l~aAr~~Lk~~~~~L~ts~kt~l~hp~~~~A~~n  145 (150)
                      .++++....|.++...|.+.++++.  .- -.|+.....+..+-..|+..+|-+++|.++...||++..|++|
T Consensus       333 e~~~e~a~~F~eha~~lvevA~Lv~--~~-s~ne~~v~~i~~aa~~le~L~PQVI~Aar~L~~~P~Sk~A~En  402 (832)
T 4igg_A          333 KEVKEYAQVFREHANKLIEVANLAC--SI-SNNEEGVKLVRMSASQLEALCPQVINAALALAAKPQSKLAQEN  402 (832)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHH--HT-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHH--hh-cCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCcHHHHHH
Confidence            4566677788888899999999993  33 5588899999999999999999999999999999999999988

>1tr2_A Vinculin isoform 1; actin-binding, cell adhesion; 2.90A {Homo sapiens} PDB: 1st6_A

Probab=94.27  E-value=0.76  Score=43.78  Aligned_cols=138  Identities=14%  Similarity=0.156  Sum_probs=100.7

Q ss_pred             HHHHHHHHhHHHHHhhhhhhcCCCcchhccccccc--hhhHHHhHHHhhcChh--h---Hhh-HhHHHHHHhhHhh---c
Q psy11519          4 QITSALELTISMSLKMCSLSTHSRPAVNRCRLNRP--YCLDNIDSLLHLVDPP--S---IDF-RSTVSRSLCRLEN---V   72 (150)
Q Consensus         4 A~~~v~~aG~~m~~aa~~f~~dp~s~~~R~~lvra--~lLs~vtrlLllaD~~--i---l~~-~~~v~~~l~~~~~---~   72 (150)
                      |...+++.+..+..+++....+|.+...+.++...  .+-..|.+|+-..|.+  +   +.. -+.+.+....+..   .
T Consensus       664 aa~~l~~~t~~lv~aar~~~~~p~n~~Ak~~l~~~~~~~~~~v~~L~~~V~~i~dl~~f~aas~~~i~ed~~~~~~a~~~  743 (1066)
T 1tr2_A          664 SVKTARELTPQVVSAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTKSLLDASEEAIKKDLDKCKVAMAN  743 (1066)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTSSCSCTHHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhhHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            44566777788889999999999999999999888  8888888887777665  1   111 1233333333322   3


Q ss_pred             CChHHHHHHHHHHhHHHHHHHHHHhhhhccCccHHHHHHHHHHHHHHHhhhHHHHHhhhhhhcCCCcHH
Q psy11519         73 TNFTEFVKAFSQFGGEMVELAHVTGERGGDLKDERRRAQMSAARQVLERSTMLLLTSSKTCLRHPDSET  141 (150)
Q Consensus        73 ~s~~el~~~f~~f~~~m~~l~~~~~~Rq~dLk~~~~rd~l~aAr~~Lk~~~~~L~ts~kt~l~hp~~~~  141 (150)
                      +..+.|...-+.....+..|...+..=..---||..+..+..|-..|...++=|+.+.|.+...|..+.
T Consensus       744 ~~~~~l~~~a~~i~~~~~~l~~vv~~~~~~s~~p~~q~~v~~a~k~l~~s~~~li~~aK~~a~~p~d~~  812 (1066)
T 1tr2_A          744 IQPQMLVAGATSIARRANRILLVAKREVENSEDPKFREAVKAASDELSKTISPMVMDAKAVAGNISDPG  812 (1066)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHHHHHHHTBCCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHCTTCTT
T ss_pred             cChHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCCCChH
Confidence            455678888888888888887777655555678999999987777777777777778899988886654

>2b0h_A Talin-1; vinculin, helical bundle, VBS, structural protein; NMR {Mus musculus} SCOP: a.24.9.2

Probab=87.03  E-value=7.5  Score=28.68  Aligned_cols=89  Identities=13%  Similarity=0.103  Sum_probs=78.5

Q ss_pred             hHhhHhHHHHHHhhH--hhcCChHHHHHHHHHHhHHHHHHHHHHhhhhccCccHHHHHHHHHHHHHHHhhhHHHHHhhhh
Q psy11519         55 SIDFRSTVSRSLCRL--ENVTNFTEFVKAFSQFGGEMVELAHVTGERGGDLKDERRRAQMSAARQVLERSTMLLLTSSKT  132 (150)
Q Consensus        55 il~~~~~v~~~l~~~--~~~~s~~el~~~f~~f~~~m~~l~~~~~~Rq~dLk~~~~rd~l~aAr~~Lk~~~~~L~ts~kt  132 (150)
                      |++.++.+..+...+  ....+++||...-++++..-.+|+..+..=..-+-+++-..+|..+-..|=..+.=|+.+.+.
T Consensus        21 m~~~~K~iA~~aqemv~ks~~~p~eL~~la~~lt~~Y~~La~~~~~A~~~~~~~~v~~~Ir~~Vq~LG~ac~~lV~~ag~  100 (137)
T 2b0h_A           21 MVRTAKAIAVTVQEMVTKSNTSPEELGPLANQLTSDYGRLASQAKPAAVAAENEEIGAHIKHRVQELGHGCSALVTKAGA  100 (137)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTCSSTHHHHHHHHHHHHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHhHHHHHHHHHHhh
Confidence            778888888888877  467899999999999999999999999999999999999999999998998888889999999


Q ss_pred             hhcCCCcHHHH
Q psy11519        133 CLRHPDSETAR  143 (150)
Q Consensus       133 ~l~hp~~~~A~  143 (150)
                      +=.||++..++
T Consensus       101 ~q~~p~d~~~q  111 (137)
T 2b0h_A          101 LQCSPSDVYTK  111 (137)
T ss_dssp             HHHCTTCHHHH
T ss_pred             ccCCcccHHHH
Confidence            98899876653

>3dyj_A Talin-1; helix bundles, cytoskeletal protein, integrin-bindin site, IBS2, cell membrane, cell projection, cytoplasm, cytoskeleton, membrane; 1.85A {Mus musculus} PDB: 4dj9_B

Probab=86.59  E-value=13  Score=31.17  Aligned_cols=128  Identities=12%  Similarity=0.142  Sum_probs=90.3

Q ss_pred             HHHHHHHHHhHHHHHhhhhhhcCCCcchhccccccc--hhhHHHhHHHhhc----Chh--hHhhHhHHHHHHhh----Hh
Q psy11519          3 DQITSALELTISMSLKMCSLSTHSRPAVNRCRLNRP--YCLDNIDSLLHLV----DPP--SIDFRSTVSRSLCR----LE   70 (150)
Q Consensus         3 ~A~~~v~~aG~~m~~aa~~f~~dp~s~~~R~~lvra--~lLs~vtrlLlla----D~~--il~~~~~v~~~l~~----~~   70 (150)
                      .|+.+|-.+-..|..+++.-...|...+.-..+-.+  .+.++|++||=..    |..  -++.++.+.+.+..    +.
T Consensus       121 na~kdVa~al~~Li~atK~A~G~~~~dpa~~~Lk~aAk~mv~nV~sLlktVk~vede~~rG~RaLEaai~~I~~el~~~~  200 (332)
T 3dyj_A          121 NAVKDVAKALGDLISATKAAAGKVGDDPAVWQLKNSAKVMVTNVTSLLKTVKAVEDEATKGTRALEATTEHIRQELAVFC  200 (332)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTCCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccccchhHHHHHHHHHHHHHHHccC
Confidence            467888888889999998888888877777777777  8999999998875    555  66666665555422    11


Q ss_pred             ------hcCChHHHHHHHHHHhHHHHHHHHHHhhhhccCccHHHHHHHHHHHHHHHhhhHHHHHhhhhhhcCCC
Q psy11519         71 ------NVTNFTEFVKAFSQFGGEMVELAHVTGERGGDLKDERRRAQMSAARQVLERSTMLLLTSSKTCLRHPD  138 (150)
Q Consensus        71 ------~~~s~~el~~~f~~f~~~m~~l~~~~~~Rq~dLk~~~~rd~l~aAr~~Lk~~~~~L~ts~kt~l~hp~  138 (150)
                            +..+.+||.+.-+.+.....++-....-        ..++++..+-...++.+-=|+.++|.-..|++
T Consensus       201 s~~~p~~~~tpE~li~~ak~vt~atakaVaA~ns--------~~qeDii~aan~~r~aV~dll~~~k~aa~~~~  266 (332)
T 3dyj_A          201 SPEPPAKTSTPEDFIRMTKGITMATAKAVAAGNS--------CRQEDVIATANLSRRAIADMLRACKEAAFHPE  266 (332)
T ss_dssp             SSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHH--------CCHHHHHHHHHHHHHHHHHHHHHHHHHHTSTT
T ss_pred             CCCCCcCCCCHHHHHHHHHHHHHHHHHHHHhcCC--------CCHHHHHHHHHhHHHHHHHHHHHHHHHHhccC
Confidence                  2245778888888877776555444332        23355667777777777777778887777776

>2kvp_A Talin-1; VBS, vinculin, helical bundle, cytoplasm, cytoskeleto membrane, phosphoprotein, structural protein, acetylation, membrane; NMR {Mus musculus}

Probab=84.07  E-value=12  Score=28.36  Aligned_cols=89  Identities=13%  Similarity=0.103  Sum_probs=78.3

Q ss_pred             hHhhHhHHHHHHhhH--hhcCChHHHHHHHHHHhHHHHHHHHHHhhhhccCccHHHHHHHHHHHHHHHhhhHHHHHhhhh
Q psy11519         55 SIDFRSTVSRSLCRL--ENVTNFTEFVKAFSQFGGEMVELAHVTGERGGDLKDERRRAQMSAARQVLERSTMLLLTSSKT  132 (150)
Q Consensus        55 il~~~~~v~~~l~~~--~~~~s~~el~~~f~~f~~~m~~l~~~~~~Rq~dLk~~~~rd~l~aAr~~Lk~~~~~L~ts~kt  132 (150)
                      |++.++.+..+...+  ....+++||...-++++..-.+|+..+..=..-+-+++-..+|..+-..|=..+.=|+.+.+.
T Consensus        49 m~~~~K~iA~~aq~mv~k~~~~p~eL~~la~~it~~y~~La~~~~~A~~t~~~~~i~~~Ik~~Vq~LG~sc~~lV~~ag~  128 (165)
T 2kvp_A           49 MVRTAKAIAVTVQEMVTKSNTSPEELGPLANQLTSDYGRLASQAKPAAVAAENEEIGAHIKHRVQELGHGCSALVTKAGA  128 (165)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHhHHHHHHHHHHhh
Confidence            888888888888877  467899999999999999999999999998999999999999999988888888889999999


Q ss_pred             hhcCCCcHHHH
Q psy11519        133 CLRHPDSETAR  143 (150)
Q Consensus       133 ~l~hp~~~~A~  143 (150)
                      +=.||++..++
T Consensus       129 ~q~~p~d~~~q  139 (165)
T 2kvp_A          129 LQCSPSDVYTK  139 (165)
T ss_dssp             HHHCTTCHHHH
T ss_pred             ccCCCccHHHH
Confidence            98899866543

>2x0c_A Talin-1; cytoskeleton, cell membrane, actin, synemin, integrin, vincu cell adhesion, cell projection; 2.00A {Mus musculus} PDB: 1zw3_B

Probab=83.72  E-value=16  Score=30.13  Aligned_cols=121  Identities=11%  Similarity=0.122  Sum_probs=75.2

Q ss_pred             HHHHHHhHHHHHhhhhhhcCCCcchhccccccc--hhhHHHhHHHhhcChhhHhhHhHHHHHHhhHhhc---CChHHHHH
Q psy11519          6 TSALELTISMSLKMCSLSTHSRPAVNRCRLNRP--YCLDNIDSLLHLVDPPSIDFRSTVSRSLCRLENV---TNFTEFVK   80 (150)
Q Consensus         6 ~~v~~aG~~m~~aa~~f~~dp~s~~~R~~lvra--~lLs~vtrlLllaD~~il~~~~~v~~~l~~~~~~---~s~~el~~   80 (150)
                      ..|-+....|..+++.-...|.....|..++.+  .+-.+++.|+               .++..+...   .+.+++..
T Consensus       146 ~~va~~t~~L~~~cr~as~~~~n~~~k~ql~~~ak~va~st~~lV---------------~~iK~ld~~~~~~~r~~~~~  210 (309)
T 2x0c_A          146 TIVAKHTSALCNSCRLASARTANPTAKRQFVQSAKEVANSTANLV---------------KTIKALDGDFTEENRAQCRA  210 (309)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHH---------------HHHHHHTTSCCHHHHHHHHH
T ss_pred             HHHHHhhHHHHHHHHHHhcCcCCchHHHHHHHHHHHHHHHHHHHH---------------HHHHHHhccCCchhHHHHHH
Confidence            444555556666666666677777777777777  6666655543               233333333   34466888


Q ss_pred             HHHHHhHHHHHHHHHHhhhhccCc------c----HHHHHHHHHHHHHHHhhhHHHHHhhhhhhcCCCcHHHHh
Q psy11519         81 AFSQFGGEMVELAHVTGERGGDLK------D----ERRRAQMSAARQVLERSTMLLLTSSKTCLRHPDSETARQ  144 (150)
Q Consensus        81 ~f~~f~~~m~~l~~~~~~Rq~dLk------~----~~~rd~l~aAr~~Lk~~~~~L~ts~kt~l~hp~~~~A~~  144 (150)
                      +.+.|.....+|-..+.  .-|+-      .    ..++..+.++|.++..++- |+...|.+.-||+.+..+.
T Consensus       211 aa~~L~~Av~~Lv~~A~--spefa~~~~~is~~~~~aq~~il~a~r~v~~~s~~-ll~taK~la~~P~dp~~~~  281 (309)
T 2x0c_A          211 ATAPLLEAVDNLSAFAS--NPEFSSVPAQISPEGRAAMEPIVISAKTMLESAGG-LIQTARALAVNPRDPPRWS  281 (309)
T ss_dssp             HHHHHHHHHHHHHHHHT--SSSSSCBCCBCCHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHTTCCCCHHHHH
T ss_pred             HHHHHHHHHHHHHHHhc--ChhhhhcccccChhhHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhcCCCCchHHH
Confidence            88888887777777653  11221      1    2355667777777765554 5556688889999887654

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	150
d1dova_	181	a.24.9.1 (A:) alpha-catenin {Mouse (Mus musculus)	2e-31
d1t01a2	127	a.24.9.1 (A:126-252) Vinculin {Chicken (Gallus gal	5e-30

>d1dova_ a.24.9.1 (A:) alpha-catenin {Mouse (Mus musculus) [TaxId: 10090]} Length = 181

class: All alpha proteins
fold: Four-helical up-and-down bundle
superfamily: alpha-catenin/vinculin-like
family: alpha-catenin/vinculin
domain: alpha-catenin
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  108 bits (272), Expect = 2e-31
 Identities = 28/89 (31%), Positives = 49/89 (55%)

Query: 62  VSRSLCRLENVTNFTEFVKAFSQFGGEMVELAHVTGERGGDLKDERRRAQMSAARQVLER 121
           V   + +L N  N  +    +     E+ +L  +  +R  +LKD   R QM+AAR +L++
Sbjct: 76  VEDGILKLRNAGNEQDLGIQYKALKPEVDKLNIMAAKRQQELKDVGNRDQMAAARGILQK 135

Query: 122 STMLLLTSSKTCLRHPDSETARQNRDTVF 150
           +  +L T+S+ CL+HPD    + NRD ++
Sbjct: 136 NVPILYTASQACLQHPDVAAYKANRDLIY 164

>d1t01a2 a.24.9.1 (A:126-252) Vinculin {Chicken (Gallus gallus) [TaxId: 9031]} Length = 127

class: All alpha proteins
fold: Four-helical up-and-down bundle
superfamily: alpha-catenin/vinculin-like
family: alpha-catenin/vinculin
domain: Vinculin
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score =  103 bits (259), Expect = 5e-30
 Identities = 17/94 (18%), Positives = 37/94 (39%), Gaps = 5/94 (5%)

Query: 62  VSRSLCRLENVTNFTEFVKAFSQFGGEMVELAHVTGERGGDLKDERRRAQMSAARQVLER 121
           +   L   E V    + V      G  M ++A +  ER  +L  +  R  +  +   ++ 
Sbjct: 16  ILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQELTHQEHRVMLVNSMNTVKE 75

Query: 122 STMLLLTSSKTCLRHPDS-----ETARQNRDTVF 150
              +L+++ K  +   ++     E A +NR+   
Sbjct: 76  LLPVLISAMKIFVTTKNTKSQGIEEALKNRNFTV 109

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	150
d1dova_	181	alpha-catenin {Mouse (Mus musculus) [TaxId: 10090]	100.0
d1t01a2	127	Vinculin {Chicken (Gallus gallus) [TaxId: 9031]}	100.0
d1t01a1	125	Vinculin {Chicken (Gallus gallus) [TaxId: 9031]}	99.43
d1u89a1	138	Talin 1 {Mouse (Mus musculus) [TaxId: 10090]}	96.43
d1h6ga1	131	alpha-catenin {Human (Homo sapiens) [TaxId: 9606]}	95.63
d2b0ha1	136	Talin 1 {Mouse (Mus musculus) [TaxId: 10090]}	94.59
d1sj8a2	125	Talin 1 {Mouse (Mus musculus) [TaxId: 10090]}	89.27
d1st6a6	72	Vinculin {Chicken (Gallus gallus) [TaxId: 9031]}	87.91
d1t01a1	125	Vinculin {Chicken (Gallus gallus) [TaxId: 9031]}	81.41

>d1dova_ a.24.9.1 (A:) alpha-catenin {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: Four-helical up-and-down bundle
superfamily: alpha-catenin/vinculin-like
family: alpha-catenin/vinculin
domain: alpha-catenin
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=8.8e-57  Score=352.53  Aligned_cols=150  Identities=25%  Similarity=0.354  Sum_probs=149.1

Q ss_pred             ChHHHHHHHHHhHHHHHhhhhhhcCCCcchhccccccc--hhhHHHhHHHhhcChh----hHhhHhHHHHHHhhHhhcCC
Q psy11519          1 MNDQITSALELTISMSLKMCSLSTHSRPAVNRCRLNRP--YCLDNIDSLLHLVDPP----SIDFRSTVSRSLCRLENVTN   74 (150)
Q Consensus         1 m~~A~~~v~~aG~~m~~aa~~f~~dp~s~~~R~~lvra--~lLs~vtrlLllaD~~----il~~~~~v~~~l~~~~~~~s   74 (150)
                      ||+||++|+++|+.|..+++.|.+||||+++|+.||+|  +||++||||||+||++    |+.++++|+++|+++++++|
T Consensus         9 m~~A~~~v~~ag~~l~~aa~~~~~dp~s~~~R~~lv~aaR~lLs~vt~lLllaD~~~Vr~il~~~~~v~~~l~~le~v~s   88 (181)
T d1dova_           9 LVVAVEDVRKQGDLMKSAAGEFADDPCSSVKRGNMVRAARALLSAVTRLLILADMADVYKLLVQLKVVEDGILKLRNAGN   88 (181)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCS
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhCCCChHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence            89999999999999999999999999999999999999  9999999999999999    99999999999999999999


Q ss_pred             hHHHHHHHHHHhHHHHHHHHHHhhhhccCccHHHHHHHHHHHHHHHhhhHHHHHhhhhhhcCCCcHHHHhccccCC
Q psy11519         75 FTEFVKAFSQFGGEMVELAHVTGERGGDLKDERRRAQMSAARQVLERSTMLLLTSSKTCLRHPDSETARQNRDTVF  150 (150)
Q Consensus        75 ~~el~~~f~~f~~~m~~l~~~~~~Rq~dLk~~~~rd~l~aAr~~Lk~~~~~L~ts~kt~l~hp~~~~A~~nRd~v~  150 (150)
                      |+||+++|++||++|++|++++++||+|||||.||++|++||++||+++|||+||||+||+||++++|++||||+|
T Consensus        89 ~~el~~~~~~f~~~~~~L~~~~~~Rq~dL~d~~~R~~l~~ar~~Lk~~~p~L~ts~k~~lrhp~~~~a~~nRd~v~  164 (181)
T d1dova_          89 EQDLGIQYKALKPEVDKLNIMAAKRQQELKDVGNRDQMAAARGILQKNVPILYTASQACLQHPDVAAYKANRDLIY  164 (181)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcHHHHHhHHHHH
Confidence            9999999999999999999999999999999999999999999999999999999999999999999999999986

>d1t01a2 a.24.9.1 (A:126-252) Vinculin {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: Four-helical up-and-down bundle
superfamily: alpha-catenin/vinculin-like
family: alpha-catenin/vinculin
domain: Vinculin
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=100.00  E-value=6.3e-39  Score=238.49  Aligned_cols=100  Identities=19%  Similarity=0.264  Sum_probs=97.8

Q ss_pred             cChh----hHhhHhHHHHHHhhHhhcCChHHHHHHHHHHhHHHHHHHHHHhhhhccCccHHHHHHHHHHHHHHHhhhHHH
Q psy11519         51 VDPP----SIDFRSTVSRSLCRLENVTNFTEFVKAFSQFGGEMVELAHVTGERGGDLKDERRRAQMSAARQVLERSTMLL  126 (150)
Q Consensus        51 aD~~----il~~~~~v~~~l~~~~~~~s~~el~~~f~~f~~~m~~l~~~~~~Rq~dLk~~~~rd~l~aAr~~Lk~~~~~L  126 (150)
                      |||+    |++.|++|+++|+++++++||+||+++|++|||+|.+|++++++||+|||||.|||+|++||++||+++|||
T Consensus         1 ~D~~eVrkIl~~~~~V~~~L~~~e~v~s~~dLv~~~k~f~~~m~~L~~~~~~Rq~dL~~~~~Rd~L~~ar~~Lk~~sp~L   80 (127)
T d1t01a2           1 FDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQELTHQEHRVMLVNSMNTVKELLPVL   80 (127)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTTTCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHBSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhHHH
Confidence            6888    999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhhhhhhcCCC-----cHHHHhccccCC
Q psy11519        127 LTSSKTCLRHPD-----SETARQNRDTVF  150 (150)
Q Consensus       127 ~ts~kt~l~hp~-----~~~A~~nRd~v~  150 (150)
                      +||||+||+||+     +++|++||||+|
T Consensus        81 ~ts~K~~v~~~~~~~~~~~eA~~NRd~v~  109 (127)
T d1t01a2          81 ISAMKIFVTTKNTKSQGIEEALKNRNFTV  109 (127)
T ss_dssp             HHHHHHHHHHTTSSSSCHHHHHHHHHHHH
T ss_pred             HHHHHHHHhCCCccccccHHHHHhHHHHH
Confidence            999999999998     699999999985

>d1t01a1 a.24.9.1 (A:1-125) Vinculin {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: Four-helical up-and-down bundle
superfamily: alpha-catenin/vinculin-like
family: alpha-catenin/vinculin
domain: Vinculin
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.43  E-value=1.6e-14  Score=105.77  Aligned_cols=49  Identities=14%  Similarity=0.011  Sum_probs=48.5

Q ss_pred             ChHHHHHHHHHhHHHHHhhhhhhcCCCcchhccccccc--hhhHHHhHHHh
Q psy11519          1 MNDQITSALELTISMSLKMCSLSTHSRPAVNRCRLNRP--YCLDNIDSLLH   49 (150)
Q Consensus         1 m~~A~~~v~~aG~~m~~aa~~f~~dp~s~~~R~~lvra--~lLs~vtrlLl   49 (150)
                      ||+||++|+++|..|..+++.|.+|||+.++|+.||+|  +||++||||||
T Consensus        74 M~~A~~~vr~ag~~l~~aa~~l~~dP~s~~~R~~lV~aaR~lL~~vtrlLl  124 (125)
T d1t01a1          74 MPPAFIKVENACTKLVRAAQMLQADPYSVPARDYLIDGSRGILSGTSDLLL  124 (125)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHHHHHHHHHc
Confidence            89999999999999999999999999999999999999  99999999998

>d1u89a1 a.216.1.1 (A:752-889) Talin 1 {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: I/LWEQ domain
superfamily: I/LWEQ domain
family: I/LWEQ domain
domain: Talin 1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.43  E-value=0.038  Score=38.90  Aligned_cols=74  Identities=19%  Similarity=0.279  Sum_probs=66.3

Q ss_pred             hcCChHHHHHHHHHHhHHHHHHHHHHhhhhccCccHHHHHHHHHHHHHHHhhhHHHHHhhhhhhcCCCcHHHHh
Q psy11519         71 NVTNFTEFVKAFSQFGGEMVELAHVTGERGGDLKDERRRAQMSAARQVLERSTMLLLTSSKTCLRHPDSETARQ  144 (150)
Q Consensus        71 ~~~s~~el~~~f~~f~~~m~~l~~~~~~Rq~dLk~~~~rd~l~aAr~~Lk~~~~~L~ts~kt~l~hp~~~~A~~  144 (150)
                      ..++.++++..-|.++.....|...+..-...-.||..+++|..|=..+-..++-|+.++|.+-.+|+++.+++
T Consensus        64 ~~~~~~~li~aAk~va~a~~~Lv~aak~~a~~~~d~~~q~~li~aA~~va~~t~qLV~aak~~a~~p~~~~~qq  137 (138)
T d1u89a1          64 SMGDAGEMVRQARILAQATSDLVNAIKADAEGESDLENSRKLLSAAKILADATAKMVEAAKGAAAHPDSEEQQQ  137 (138)
T ss_dssp             TTTTSHHHHHHHHHHHHHHHHHHHHHHHHGGGCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSCCSSCCCC
T ss_pred             ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHhhcc
Confidence            45677889999999999999999999888888889999999999999999999999999999999998876653

>d1h6ga1 a.24.9.1 (A:377-507) alpha-catenin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: Four-helical up-and-down bundle
superfamily: alpha-catenin/vinculin-like
family: alpha-catenin/vinculin
domain: alpha-catenin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.63  E-value=0.11  Score=36.49  Aligned_cols=73  Identities=16%  Similarity=0.272  Sum_probs=57.9

Q ss_pred             hcCChHHHHHHHHHHhHHHHHHHHHHhhhhccCccHHHHHHHHHHHHHHHhhhHHHHHhhhhhhcCCCcHHHHhcc
Q psy11519         71 NVTNFTEFVKAFSQFGGEMVELAHVTGERGGDLKDERRRAQMSAARQVLERSTMLLLTSSKTCLRHPDSETARQNR  146 (150)
Q Consensus        71 ~~~s~~el~~~f~~f~~~m~~l~~~~~~Rq~dLk~~~~rd~l~aAr~~Lk~~~~~L~ts~kt~l~hp~~~~A~~nR  146 (150)
                      +-.+++|-...|.++...|.+.++++..  -- .|+..-..+..|-..|+..+|-++++-++...||++-.|++|=
T Consensus        36 ~~~~~~e~a~~F~eh~~~l~e~a~l~~~--~s-~ne~~v~~i~~aa~~l~~L~PQVi~Aar~l~~~P~sk~a~en~  108 (131)
T d1h6ga1          36 NEKEVKEYAQVFREHANKLIEVANLACS--IS-NNEEGVKLVRMSASQLEALCPQVINAALALAAKPQSKLAQENM  108 (131)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHT--TC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred             chhhHHHHHHHHHHHHHHHHHHHHHHHH--hc-CChHHHHHHHHHHHHHHHHChHHHHHHHHHHhCCCcHHHHHHH
Confidence            3344555666788888888888888633  33 4677777777888889999999999999999999999999883

>d2b0ha1 a.24.9.2 (A:1838-1973) Talin 1 {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: Four-helical up-and-down bundle
superfamily: alpha-catenin/vinculin-like
family: VBS domain
domain: Talin 1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=94.59  E-value=0.27  Score=33.86  Aligned_cols=89  Identities=13%  Similarity=0.091  Sum_probs=63.2

Q ss_pred             hHhhHhHHHHHHhhHh--hcCChHHHHHHHHHHhHHHHHHHHHHhhhhccCccHHHHHHHHHHHHHHHhhhHHHHHhhhh
Q psy11519         55 SIDFRSTVSRSLCRLE--NVTNFTEFVKAFSQFGGEMVELAHVTGERGGDLKDERRRAQMSAARQVLERSTMLLLTSSKT  132 (150)
Q Consensus        55 il~~~~~v~~~l~~~~--~~~s~~el~~~f~~f~~~m~~l~~~~~~Rq~dLk~~~~rd~l~aAr~~Lk~~~~~L~ts~kt  132 (150)
                      |+...+.+......+.  .-++.++|...-++++.....|...+..=..-..||..+.+|..+-..+-..+-=|+.+.|.
T Consensus        20 ~~~~ak~l~~~~~~lv~~a~~~~~~L~~~a~~~a~~~~~L~~~~k~~A~~~~~~~~q~~ll~~ak~v~~s~~~Lv~aak~   99 (136)
T d2b0ha1          20 MVRTAKAIAVTVQEMVTKSNTSPEELGPLANQLTSDYGRLASQAKPAAVAAENEEIGAHIKHRVQELGHGCSALVTKAGA   99 (136)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTCSSTHHHHHHHHHHHHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4455555555554443  34456667777778888887777777777777788888888887777777777777888888


Q ss_pred             hhcCCCcHHHH
Q psy11519        133 CLRHPDSETAR  143 (150)
Q Consensus       133 ~l~hp~~~~A~  143 (150)
                      +-.+|+.+.++
T Consensus       100 ~~~nP~d~~~~  110 (136)
T d2b0ha1         100 LQCSPSDVYTK  110 (136)
T ss_dssp             HHHCTTCHHHH
T ss_pred             hccCCCcHHHH
Confidence            88888777654

>d1sj8a2 a.216.1.1 (A:658-782) Talin 1 {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: I/LWEQ domain
superfamily: I/LWEQ domain
family: I/LWEQ domain
domain: Talin 1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=89.27  E-value=0.67  Score=31.30  Aligned_cols=59  Identities=14%  Similarity=0.088  Sum_probs=40.4

Q ss_pred             CChHHHHHHHHHHhHHHHHHHHHHhhhhccCccHHHHHHHHHHHHHHHhhhHHHHHhhh
Q psy11519         73 TNFTEFVKAFSQFGGEMVELAHVTGERGGDLKDERRRAQMSAARQVLERSTMLLLTSSK  131 (150)
Q Consensus        73 ~s~~el~~~f~~f~~~m~~l~~~~~~Rq~dLk~~~~rd~l~aAr~~Lk~~~~~L~ts~k  131 (150)
                      ...++|....+++.....+|-..++.=.....||..+.+|..+=..+...+--|+.+++
T Consensus        40 ~~q~~Li~aa~~v~~~t~qLv~~aK~~a~~~~d~~~q~~L~~aak~V~~a~~~Lv~a~~   98 (125)
T d1sj8a2          40 GLQTQVIAAATQCALSTSQLVACTKVVAPTISSPVCQEQLVEAGRLVAKAVEGCVSASQ   98 (125)
T ss_dssp             SSSHHHHHHHHHHHHHHHHHHHHHHHHTTTCSSHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            45566777777777777777777776666777777777777666666666666665554

>d1st6a6 a.24.9.1 (A:647-718) Vinculin {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: Four-helical up-and-down bundle
superfamily: alpha-catenin/vinculin-like
family: alpha-catenin/vinculin
domain: Vinculin
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=87.91  E-value=0.49  Score=29.95  Aligned_cols=42  Identities=14%  Similarity=0.233  Sum_probs=34.9

Q ss_pred             cHHHHHHHHHHHHHHHhhhHHHHHhhhhhhcCCCcHHHHhcc
Q psy11519        105 DERRRAQMSAARQVLERSTMLLLTSSKTCLRHPDSETARQNR  146 (150)
Q Consensus       105 ~~~~rd~l~aAr~~Lk~~~~~L~ts~kt~l~hp~~~~A~~nR  146 (150)
                      ++..=+-+..|-..|+..+|-++++.++...||++-.|++|=
T Consensus         8 n~~~ve~i~~aa~qle~L~PQVi~AariL~~~P~sK~a~En~   49 (72)
T d1st6a6           8 NKTTVEGIQATVKSARELTPQVVSAARILLRNPGNQAAYEHF   49 (72)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSTTCHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCcHHHHHHH
Confidence            344445566777789999999999999999999999999873

>d1t01a1 a.24.9.1 (A:1-125) Vinculin {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: Four-helical up-and-down bundle
superfamily: alpha-catenin/vinculin-like
family: alpha-catenin/vinculin
domain: Vinculin
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=81.41  E-value=4.7  Score=27.42  Aligned_cols=63  Identities=21%  Similarity=0.191  Sum_probs=39.9

Q ss_pred             HHHHhHHHHHHHHHHhhhhccCccHHHHHHHHHHHHHHHhhhHHHHHhhhhhhcCCCcHHHHh
Q psy11519         82 FSQFGGEMVELAHVTGERGGDLKDERRRAQMSAARQVLERSTMLLLTSSKTCLRHPDSETARQ  144 (150)
Q Consensus        82 f~~f~~~m~~l~~~~~~Rq~dLk~~~~rd~l~aAr~~Lk~~~~~L~ts~kt~l~hp~~~~A~~  144 (150)
                      -+.....+.+|-.....=.+|=.|+.-|++|-.|-.-+++.+--|.-++..+-.+|.+-.+|.
T Consensus        44 ~~aV~~Av~~fv~vG~~~a~~s~d~~lk~eM~~A~~~vr~ag~~l~~aa~~l~~dP~s~~~R~  106 (125)
T d1t01a1          44 VSAVQAAVSNLVRVGKETVQTTEDQILKRDMPPAFIKVENACTKLVRAAQMLQADPYSVPARD  106 (125)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCChhhHH
Confidence            334444444444433333444456777777777777778777777777777777777766553