Psyllid ID: psy11860


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120---
MTERDIGTYYEDSKWVQTLNFLLQCNWGARHLDSAKQVLKVGAKGKSDSLRYEYDDHYFLTDPREFIYEFFPLQPEWQLLKTSISLRDFEELPFVRSLFFRYGLYFPDTNTKAVMYTDQTGEY
ccccccccEEEccEEEEccccEEEcccccEEEcccccHHHccccccccccccccccEEEcccHHHHHHHccccccccccccccccHHHHHccccccHHHHHcccccccccccEEEEccccccc
cccEEccEEEccccccccHHEEEEccHcHHEEcccccccccccccccccEEEEEcccEEcccHHHHHHHHcccccccEcccccccHHHHHHcccccHHHHHcccEEccccccEEEEEcccccc
mterdigtyyedskWVQTLNFLLQCNWGARHLDSAKQVLKVGakgksdslryeyddhyfltdprefiyeffplqpewQLLKTSIslrdfeelpfvrslffryglyfpdtntkavmytdqtgey
mterdigtyyedskwvQTLNFLLQCNWGARHLDSAKQVLKVGakgksdslrYEYDDHYFLTDPREFIYEFFPLQPEWQLLKTSISLRDFEELPFVRSLFFryglyfpdtntkavmytdqtgey
MTERDIGTYYEDSKWVQTLNFLLQCNWGARHLDSAKQVLKVGAKGKSDSLRYEYDDHYFLTDPREFIYEFFPLQPEWQLLKTSISLRDFEELPFVRSLFFRYGLYFPDTNTKAVMYTDQTGEY
*****IGTYYEDSKWVQTLNFLLQCNWGARHLDSAKQVLKVGAKGKSDSLRYEYDDHYFLTDPREFIYEFFPLQPEWQLLKTSISLRDFEELPFVRSLFFRYGLYFPDTNTKAVMY*******
****DIGTYYEDSKWVQTLNFLLQCNWGARHLDSAKQVLKVGAKGKSDSLRYEYDDHYFLTDPREFIYEFFPLQPEWQLLKTSISLRDFEELPFVRSLFFRYGLYFPDTNTKAV*********
MTERDIGTYYEDSKWVQTLNFLLQCNWGARHLDSAKQVLKVGAKGKSDSLRYEYDDHYFLTDPREFIYEFFPLQPEWQLLKTSISLRDFEELPFVRSLFFRYGLYFPDTNTKAVMYTDQTGEY
*TERDIGTYYEDSKWVQTLNFLLQCNWGARHLDSAKQVLKVGAKGKSDSLRYEYDDHYFLTDPREFIYEFFPLQPEWQLLKTSISLRDFEELPFVRSLFFRYGLYFPDTNTKAVMYTDQ****
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MTERDIGTYYEDSKWVQTLNFLLQCNWGARHLDSAKQVLKVGAKGKSDSLRYEYDDHYFLTDPREFIYEFFPLQPEWQLLKTSISLRDFEELPFVRSLFFRYGLYFPDTNTKAVMYTDQTGEY
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query123 2.2.26 [Sep-21-2011]
Q8C8H8 661 Kyphoscoliosis peptidase yes N/A 0.666 0.124 0.301 5e-05
Q8NBH2 561 Kyphoscoliosis peptidase no N/A 0.495 0.108 0.393 7e-05
O14302 886 cytokinesis protein 3 OS= yes N/A 0.520 0.072 0.328 0.0008
>sp|Q8C8H8|KY_MOUSE Kyphoscoliosis peptidase OS=Mus musculus GN=Ky PE=1 SV=1 Back     alignment and function desciption
 Score = 46.6 bits (109), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 42/93 (45%), Gaps = 11/93 (11%)

Query: 22  LLQCNWGARHLDSAKQVLKVGAKGKSDSLRYEYDDHYFLTDPREFIYEFFPLQPEWQLLK 81
           L+   WG+  +D+            +    + Y++ YFLT P  FI + FP    WQLLK
Sbjct: 280 LVDSTWGSGLVDTT-----------TSKFTFLYNEFYFLTHPALFIEDHFPDNKNWQLLK 328

Query: 82  TSISLRDFEELPFVRSLFFRYGLYFPDTNTKAV 114
              SLR FE   + +S F+  G+      T  +
Sbjct: 329 PPQSLRQFENSMYHKSEFYNKGMLSAHPETSMI 361




Probable cytoskeleton-associated protease required for normal muscle growth. Involved in function, maturation and stabilization of the neuromuscular junction. May act by cleaving muscle-specific proteins such as FLNC.
Mus musculus (taxid: 10090)
EC: 3EC: .EC: 4EC: .EC: -EC: .EC: -
>sp|Q8NBH2|KY_HUMAN Kyphoscoliosis peptidase OS=Homo sapiens GN=KY PE=1 SV=2 Back     alignment and function description
>sp|O14302|CYK3_SCHPO cytokinesis protein 3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=cyk3 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query123
242015798 777 conserved hypothetical protein [Pediculu 0.934 0.148 0.707 1e-45
442761295 637 Putative tgc transglutaminase/protease-l 0.934 0.180 0.691 5e-44
332028160 893 Kyphoscoliosis peptidase [Acromyrmex ech 0.934 0.128 0.709 5e-44
321469946 648 hypothetical protein DAPPUDRAFT_50447 [D 0.934 0.177 0.691 5e-44
357618533 622 hypothetical protein KGM_16350 [Danaus p 0.934 0.184 0.699 6e-44
307189578 836 Kyphoscoliosis peptidase [Camponotus flo 0.934 0.137 0.701 2e-43
307200562 840 Kyphoscoliosis peptidase [Harpegnathos s 0.934 0.136 0.701 2e-43
380015364 866 PREDICTED: uncharacterized protein LOC10 0.934 0.132 0.701 3e-43
383862882 833 PREDICTED: uncharacterized protein LOC10 0.934 0.138 0.701 4e-43
383862880 813 PREDICTED: uncharacterized protein LOC10 0.934 0.141 0.701 4e-43
>gi|242015798|ref|XP_002428534.1| conserved hypothetical protein [Pediculus humanus corporis] gi|212513168|gb|EEB15796.1| conserved hypothetical protein [Pediculus humanus corporis] Back     alignment and taxonomy information
 Score =  186 bits (472), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 87/123 (70%), Positives = 103/123 (83%), Gaps = 8/123 (6%)

Query: 7   GTYYEDSKWVQTLNFL--------LQCNWGARHLDSAKQVLKVGAKGKSDSLRYEYDDHY 58
           G  +ED+++  + N +        +QCNWGARHL +AK+V K G KGK+DSLRYEYDDHY
Sbjct: 465 GVKFEDNRFRNSWNAVYAAGAWRFVQCNWGARHLVNAKEVPKPGIKGKTDSLRYEYDDHY 524

Query: 59  FLTDPREFIYEFFPLQPEWQLLKTSISLRDFEELPFVRSLFFRYGLYFPDTNTKAVMYTD 118
           FLTDPREFIYEFFPLQ EWQLLK+ I+L+DFEELPFVRSLFFRYGLYFPD+NTKAVM+TD
Sbjct: 525 FLTDPREFIYEFFPLQSEWQLLKSPITLQDFEELPFVRSLFFRYGLYFPDSNTKAVMHTD 584

Query: 119 QTG 121
           Q+G
Sbjct: 585 QSG 587




Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|442761295|gb|JAA72806.1| Putative tgc transglutaminase/protease-like domain-containing protein involved in cytokinesis, partial [Ixodes ricinus] Back     alignment and taxonomy information
>gi|332028160|gb|EGI68211.1| Kyphoscoliosis peptidase [Acromyrmex echinatior] Back     alignment and taxonomy information
>gi|321469946|gb|EFX80924.1| hypothetical protein DAPPUDRAFT_50447 [Daphnia pulex] Back     alignment and taxonomy information
>gi|357618533|gb|EHJ71478.1| hypothetical protein KGM_16350 [Danaus plexippus] Back     alignment and taxonomy information
>gi|307189578|gb|EFN73942.1| Kyphoscoliosis peptidase [Camponotus floridanus] Back     alignment and taxonomy information
>gi|307200562|gb|EFN80714.1| Kyphoscoliosis peptidase [Harpegnathos saltator] Back     alignment and taxonomy information
>gi|380015364|ref|XP_003691673.1| PREDICTED: uncharacterized protein LOC100868040 [Apis florea] Back     alignment and taxonomy information
>gi|383862882|ref|XP_003706912.1| PREDICTED: uncharacterized protein LOC100875804 isoform 2 [Megachile rotundata] Back     alignment and taxonomy information
>gi|383862880|ref|XP_003706911.1| PREDICTED: uncharacterized protein LOC100875804 isoform 1 [Megachile rotundata] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query123
FB|FBgn0050147 818 Hil "Hillarin" [Drosophila mel 0.796 0.119 0.737 5.3e-36
WB|WBGene00003089 723 ltd-1 [Caenorhabditis elegans 0.902 0.153 0.512 8.8e-26
UNIPROTKB|F1NIX3 655 KY "Uncharacterized protein" [ 0.739 0.138 0.329 4.4e-06
UNIPROTKB|F1SL89 662 KY "Uncharacterized protein" [ 0.691 0.128 0.320 4.4e-06
UNIPROTKB|Q8NBH2 561 KY "Kyphoscoliosis peptidase" 0.682 0.149 0.329 5.8e-06
MGI|MGI:96709 661 Ky "kyphoscoliosis peptidase" 0.463 0.086 0.423 9.3e-06
RGD|1305407 663 Ky "kyphoscoliosis peptidase" 0.699 0.129 0.333 1.2e-05
FB|FBgn0050147 Hil "Hillarin" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 397 (144.8 bits), Expect = 5.3e-36, P = 5.3e-36
 Identities = 73/99 (73%), Positives = 84/99 (84%)

Query:    23 LQCNWGARHLDSAKQVLKVGAKGKSDSLRYEYDDHYFLTDPREFIYEFFPLQPEWQLLKT 82
             +QCNWGARHL +AK+  K G +GK+DSLRYEYDDHYFLTDPREFIYEF+PLQ EWQLLK 
Sbjct:   482 VQCNWGARHLVNAKEAPKQG-RGKNDSLRYEYDDHYFLTDPREFIYEFYPLQEEWQLLKR 540

Query:    83 SISLRDFEELPFVRSLFFRYGLYFPDTNTKAVMYTDQTG 121
              I+LR+FE LPFVRSLFFRYGL+F D    AV++TD TG
Sbjct:   541 PITLREFENLPFVRSLFFRYGLHFADEGYGAVVFTDDTG 579




GO:0008270 "zinc ion binding" evidence=IEA
WB|WBGene00003089 ltd-1 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
UNIPROTKB|F1NIX3 KY "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|F1SL89 KY "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|Q8NBH2 KY "Kyphoscoliosis peptidase" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
MGI|MGI:96709 Ky "kyphoscoliosis peptidase" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|1305407 Ky "kyphoscoliosis peptidase" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query123
COG5279 521 COG5279, CYK3, Uncharacterized protein involved in 2e-06
>gnl|CDD|227604 COG5279, CYK3, Uncharacterized protein involved in cytokinesis, contains TGc (transglutaminase/protease-like) domain [Cell division and chromosome partitioning] Back     alignment and domain information
 Score = 44.9 bits (106), Expect = 2e-06
 Identities = 19/63 (30%), Positives = 28/63 (44%)

Query: 56  DHYFLTDPREFIYEFFPLQPEWQLLKTSISLRDFEELPFVRSLFFRYGLYFPDTNTKAVM 115
             YFL  P + I    P + +WQ +K  + +     LP+V  +FF  GL     NT  + 
Sbjct: 286 HSYFLLAPNQMIATHVPEKDDWQFIKPDLDMPIVMALPWVSPVFFTLGLKLRKFNTSILH 345

Query: 116 YTD 118
             D
Sbjct: 346 LND 348


Length = 521

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 123
COG5279 521 CYK3 Uncharacterized protein involved in cytokines 99.74
KOG4575|consensus 874 99.34
KOG4575|consensus 874 97.98
smart0046068 TGc Transglutaminase/protease-like homologues. Tra 84.88
>COG5279 CYK3 Uncharacterized protein involved in cytokinesis, contains TGc (transglutaminase/protease-like) domain [Cell division and chromosome partitioning] Back     alignment and domain information
Probab=99.74  E-value=1e-18  Score=149.95  Aligned_cols=94  Identities=24%  Similarity=0.496  Sum_probs=84.7

Q ss_pred             CCCceeee--------eeecccCCCcccchhhhhhhccCCCCCCccccCCccccccChhhhHHhcCCCCCCceeccCCCC
Q psy11860         14 KWVQTLNF--------LLQCNWGARHLDSAKQVLKVGAKGKSDSLRYEYDDHYFLTDPREFIYEFFPLQPEWQLLKTSIS   85 (123)
Q Consensus        14 ~~nHaWNa--------LiD~~Wgag~~~~~~~~~~~~~~~~~~~~~~~~~~~yFlt~P~~fi~tHfP~d~~wQlL~~pis   85 (123)
                      ..|||||+        +||.|||++...+.+.            -..+++..||++.|+++|++|+|..+.||++.++++
T Consensus       248 ~iNHaWN~VkiD~~yy~VDtTwgdPI~~d~~~------------~~~~~n~~YF~lap~qMi~tH~p~k~~wq~~~~~~d  315 (521)
T COG5279         248 NINHAWNIVKIDNEYYLVDTTWGDPIHPDQNS------------KSSKINHSYFLLAPNQMIATHVPEKDDWQFIKPDLD  315 (521)
T ss_pred             cccceeeEEEECCeEEEEeeecCCCCcccccc------------cccccCchhccCChHHHhhhcCCCcchhhccCCchh
Confidence            68999999        9999999998765321            125889999999999999999999999999999999


Q ss_pred             HHHHhcCCCCChHHHHcCCCCCCCCcceEEEeCC
Q psy11860         86 LRDFEELPFVRSLFFRYGLYFPDTNTKAVMYTDQ  119 (123)
Q Consensus        86 ~~~f~~~p~~~~~FF~~gL~l~s~~~~~~~~~~~  119 (123)
                      ...++.+|.++|.||+.||+|.++.++++...|.
T Consensus       316 ~~~~~~lp~vt~~~f~~~l~l~~~~~~~~~~~~~  349 (521)
T COG5279         316 MPIVMALPWVSPVFFTLGLKLRKFNTSILHLNDL  349 (521)
T ss_pred             hhhhhhcccccchhhcccceeeeccccccccCcc
Confidence            9999999999999999999999999998877654



>KOG4575|consensus Back     alignment and domain information
>KOG4575|consensus Back     alignment and domain information
>smart00460 TGc Transglutaminase/protease-like homologues Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00