Psyllid ID: psy11930

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270----
Protein Sequence
MEYQGSKDFFMPNKREDSYSTLSWRKAIKSTLWKNGGWMNIPQGRPANCPPGLEYLTTVDQLMVKQKVELLEALIGWETNNKFTVKNAQGQKVFLAVEINDCCTRNCCGPLRPFEMKVLDNYKNEVIHFERPLACDSCWFPCCLQSLNVFSPPGALIGSIEQEWSLLTPIFVIKNGAGDIVLRIEGPICRYSMCGGDVDFKILSRDGQTEVGRISKQWSGLLREAFTDADYFGISFPGDLDVRMKAVMLGACFLIDAMFYEKAGNRESDGIGML
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEcHHHHHHHccccccEEEEEcccccEEEEEEEEcccEEcccccccccEEEEEEEccccEEEEEEcccccccccccccccccEEEcccccEEEEEEcccccccccEEEEcccccEEEEEEcccEEEcccccccccEEEcccccEEEEEEEEcccccccccccccccEEEEccccccHHHHHHHHHHHHHHHHHHHcccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccEEEEcccccEEEEEEEccccccHHcccccccEEEEEEEccccEEEEEEccccccccccccccEEEEEEcccccEEEEEEEEccccccEEEEEccccccEEEEEccEEEEEcccccEEEEEEEccccEEEEEEEEcccHHHHHHHcccccccEEccccccHHHHHHHHHHHHHHHHHHEEccccccccccccc
Coil and Loop (DISEMBL)
meyqgskdffmpnkredsysTLSWRKAIKSTLWknggwmnipqgrpancppgleyltTVDQLMVKQKVELLEALIGwetnnkftvknaQGQKVFLAVEINdcctrnccgplrpfemKVLDNYknevihferplacdscwfpcclqslnvfsppgaligsIEQEWSLLTPIFvikngagdivlriegpicrysmcggdvdfkilsrdgqtevgRISKQWSGLLReaftdadyfgisfpgdLDVRMKAVMLGACFLIDAMFYEkagnresdgigml
Flexible Loop (DISEMBL)
meyqgskdffmpnkredsystLSWRKAIKSTLWKNGGWMNIPQGRPANCPPGLEYLTTVDQLMVKQKVELLEALIGWETNNKFTVKNAQGQKVFLAVEINDCCTRNCCGPLRPFEMKVLDNYKNEVIHFERPLACDSCWFPCCLQSLNVFSPPGALIGSIEQEWSLLTPIFVIKNGAGDIVLRIEGPICRYSMCGGDVDFKILSRDGQTEVGRISKQWSGLLREAFTDADYFGISFPGDLDVRMKAVMLGACFLIDAMFYEKAgnresdgigml
Low Complexity Region (SEG)
MEYQGSKDFFMPNKREDSYSTLSWRKAIKSTLWKNGGWMNIPQGRPANCPPGLEYLTTVDQLMVKQKVELLEALIGWETNNKFTVKNAQGQKVFLAVEINDCCTRNCCGPLRPFEMKVLDNYKNEVIHFERPLACDSCWFPCCLQSLNVFSPPGALIGSIEQEWSLLTPIFVIKNGAGDIVLRIEGPICRYSMCGGDVDFKILSRDGQTEVGRISKQWSGLLREAFTDADYFGISFPGDLDVRMKAVMLGACFLIDAMFYEKAGNRESDGIGML
Disordered region (IsUnstruct)
*******************STLSWRKAIKSTLWKNGGWMNIPQGRPANCPPGLEYLTTVDQLMVKQKVELLEALIGWETNNKFTVKNAQGQKVFLAVEINDCCTRNCCGPLRPFEMKVLDNYKNEVIHFERPLACDSCWFPCCLQSLNVFSPPGALIGSIEQEWSLLTPIFVIKNGAGDIVLRIEGPICRYSMCGGDVDFKILSRDGQTEVGRISKQWSGLLREAFTDADYFGISFPGDLDVRMKAVMLGACFLIDAMFYE*************
Disordered Region (DISOPRED)
**********************************************ANCPPGLEYLTTVDQLMVKQKVELLEALIGWETNNKFTVKNAQGQKVFLAVEINDCCTRNCCGPLRPFEMKVLDNYKNEVIHFERPLACDSCWFPCCLQSLNVFSPPGALIGSIEQEWSLLTPIFVIKNGAGDIVLRIEGPICRYSMCGGDVDFKILSRDGQTEVGRISKQWSGLLREAFTDADYFGISFPGDLDVRMKAVMLGACFLIDAM****************
Disordered Region (DISEMBL)
MEYQGSKDFFMPNKREDSYSTLSWRKAIKSTLWKNGGWMNIPQGRPANCPPGLEYLTTVDQLMVKQKVELLEALIGWETNNKFTVKNAQGQKVFLAVEINDCCTRNCCGPLRPFEMKVLDNYKNEVIHFERPLACDSCWFPCCLQSLNVFSPPGALIGSIEQEWSLLTPIFVIKNGAGDIVLRIEGPICRYSMCGGDVDFKILSRDGQTEVGRISKQWSGLLREAFTDADYFGISFPGDLDVRMKAVMLGACFLIDAMFYEKAGNRESDGIGML
Disordered Region (DISPRO)
*******DFFMPNKREDSYSTLSWRKAIKSTLWKNGGWMNIPQGRPANCPPGLEYLTTVDQLMVKQKVELLEALIGWETNNKFTVKNAQGQKVFLAVEINDCCTRNCCGPLRPFEMKVLDNYKNEVIHFERPLACDSCWFPCCLQSLNVFSPPGALIGSIEQEWSLLTPIFVIKNGAGDIVLRIEGPICRYSMCGGDVDFKILSRDGQTEVGRISKQWSGLLREAFTDADYFGISFPGDLDVRMKAVMLGACFLIDAMFYEKA***********
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MEYQGSKDFFMPNKREDSYSTLSWRKAIKSTLWKNGGWMNIPQGRPANCPPGLEYLTTVDQLMVKQKVELLEALIGWETNNKFTVKNAQGQKVFLAVEINDCCTRNCCGPLRPFEMKVLDNYKNEVIHFERPLACDSCWFPCCLQSLNVFSPPGALIGSIEQEWSLLTPIFVIKNGAGDIVLRIEGPICRYSMCGGDVDFKILSRDGQTEVGRISKQWSGLLREAFTDADYFGISFPGDLDVRMKAVMLGACFLIDAMFYEKAGNRESDGIGML
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	274	2.2.26 [Sep-21-2011]
Q3ZBG9	293	Phospholipid scramblase 2	yes	N/A	0.810	0.757	0.580	6e-74
Q9JJ00	328	Phospholipid scramblase 1	yes	N/A	0.788	0.658	0.571	4e-71
P58195	335	Phospholipid scramblase 1	yes	N/A	0.788	0.644	0.571	2e-70
O15162	318	Phospholipid scramblase 1	yes	N/A	0.832	0.716	0.582	8e-70
Q9DCW2	307	Phospholipid scramblase 2	no	N/A	0.843	0.752	0.532	1e-69
Q6QBQ4	296	Phospholipid scramblase 3	no	N/A	0.806	0.746	0.468	4e-55
A0PG75	271	Phospholipid scramblase f	no	N/A	0.777	0.785	0.462	4e-55
Q9JIZ9	296	Phospholipid scramblase 3	no	N/A	0.806	0.746	0.472	4e-55
Q9NRY6	295	Phospholipid scramblase 3	no	N/A	0.784	0.728	0.476	8e-55
Q9NRY7	224	Phospholipid scramblase 2	no	N/A	0.770	0.941	0.523	4e-53

>sp|Q3ZBG9|PLS2_BOVIN Phospholipid scramblase 2 OS=Bos taurus GN=PLSCR2 PE=2 SV=1

 Score =  277 bits (708), Expect = 6e-74,   Method: Compositional matrix adjust.
 Identities = 130/224 (58%), Positives = 161/224 (71%), Gaps = 2/224 (0%)

Query: 38  WMNIPQGRPANCPPGLEYLTTVDQLMVKQKVELLEALIGWETNNKFTVKNAQGQKVFLAV 97
           WM  P   P NCPPGLEYLT +DQL++ Q++ELLE LIG+ETNNK+ +KN+ GQ+++ A 
Sbjct: 67  WMPAPL-PPLNCPPGLEYLTQIDQLLIHQQIELLEVLIGFETNNKYEIKNSLGQRIYFAA 125

Query: 98  EINDCCTRNCCGPLRPFEMKVLDNYKNEVIHFERPLACDSCWFPCCLQSLNVFSPPGALI 157
           E  DCCTRNCCGP RPF M++LDN   EVI  ERPL C SC FPCCLQ + + +PPG  +
Sbjct: 126 EDTDCCTRNCCGPSRPFTMRILDNMGREVITLERPLRCTSCCFPCCLQEIEIQAPPGVPV 185

Query: 158 GSIEQEWSLLTPIFVIKNGAGDIVLRIEGPICRYSMCGGDVDFKILSRDGQTEVGRISKQ 217
           G + Q W    P F I+N   + VLRI GP C    C  D+DF++ S D +  VG+ISK 
Sbjct: 186 GYVTQTWHPCLPKFTIQNERREDVLRISGP-CVICSCCADIDFEVKSLDDKYVVGKISKH 244

Query: 218 WSGLLREAFTDADYFGISFPGDLDVRMKAVMLGACFLIDAMFYE 261
           W+GL++E FTD D FGI FP DLDV+MKAVMLGACFLID MF+E
Sbjct: 245 WTGLIKELFTDVDNFGIQFPLDLDVKMKAVMLGACFLIDFMFFE 288

May mediate accelerated ATP-independent bidirectional transbilayer migration of phospholipids upon binding calcium ions that results in a loss of phospholipid asymmetry in the plasma membrane. May play a central role in the initiation of fibrin clot formation, in the activation of mast cells and in the recognition of apoptotic and injured cells by the reticuloendothelial system.
Bos taurus (taxid: 9913)

>sp|Q9JJ00|PLS1_MOUSE Phospholipid scramblase 1 OS=Mus musculus GN=Plscr1 PE=2 SV=1

 Score =  268 bits (684), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 124/217 (57%), Positives = 157/217 (72%), Gaps = 1/217 (0%)

Query: 52  GLEYLTTVDQLMVKQKVELLEALIGWETNNKFTVKNAQGQKVFLAVEINDCCTRNCCGPL 111
           GLEYL  +DQL+V Q++ELLE L G+ETNNK+ +KN+ GQ+V+ AVE  DCCTRNCCG  
Sbjct: 107 GLEYLAQIDQLLVHQQIELLEVLTGFETNNKYEIKNSLGQRVYFAVEDTDCCTRNCCGAS 166

Query: 112 RPFEMKVLDNYKNEVIHFERPLACDSCWFPCCLQSLNVFSPPGALIGSIEQEWSLLTPIF 171
           RPF +++LDN   EV+  ERPL C SC FPCCLQ + + +PPG  +G + Q W    P F
Sbjct: 167 RPFTLRILDNLGREVMTLERPLRCSSCCFPCCLQEIEIQAPPGVPVGYVTQTWHPCLPKF 226

Query: 172 VIKNGAGDIVLRIEGPICRYSMCGGDVDFKILSRDGQTEVGRISKQWSGLLREAFTDADY 231
            ++N     VL++ GP C    C  D+DF++ S D ++ VG+ISKQWSG +REAFTDAD 
Sbjct: 227 TLQNEKKQDVLKVVGP-CVVCSCCSDIDFELKSLDEESVVGKISKQWSGFVREAFTDADN 285

Query: 232 FGISFPGDLDVRMKAVMLGACFLIDAMFYEKAGNRES 268
           FGI FP DLDV+MKAVMLGACFLID MF+E+ GN E 
Sbjct: 286 FGIQFPLDLDVKMKAVMLGACFLIDFMFFERTGNEEQ 322

May play a role in the antiviral response of interferon (IFN) by amplifying and enhancing the IFN response through increased expression of select subset of potent antiviral genes. May contribute to cytokine-regulated cell proliferation and differentiation.

Mus musculus (taxid: 10090)

>sp|P58195|PLS1_RAT Phospholipid scramblase 1 OS=Rattus norvegicus GN=Plscr1 PE=1 SV=1

 Score =  266 bits (679), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 124/217 (57%), Positives = 158/217 (72%), Gaps = 1/217 (0%)

Query: 52  GLEYLTTVDQLMVKQKVELLEALIGWETNNKFTVKNAQGQKVFLAVEINDCCTRNCCGPL 111
           GLEYLT +DQ++V Q++ELLE L G+ETNNK+ +KN+ GQ+V+ AVE  DCCTRNCCG  
Sbjct: 115 GLEYLTQIDQILVHQQIELLEVLTGFETNNKYEIKNSLGQRVYFAVEDTDCCTRNCCGAS 174

Query: 112 RPFEMKVLDNYKNEVIHFERPLACDSCWFPCCLQSLNVFSPPGALIGSIEQEWSLLTPIF 171
           RPF +++LDN   EV+  ERPL C SC FPCCLQ + + +PPG  +G + Q W    P F
Sbjct: 175 RPFTLRILDNMGREVMTLERPLRCSSCCFPCCLQEIEIQAPPGVPVGYVIQTWHPCLPKF 234

Query: 172 VIKNGAGDIVLRIEGPICRYSMCGGDVDFKILSRDGQTEVGRISKQWSGLLREAFTDADY 231
            ++N     VL++ GP C    C  D+DF++ S D ++ VG+ISKQWSG +REAFTDAD 
Sbjct: 235 TLQNEKRQDVLKVVGP-CVVCSCCSDIDFELKSLDEESVVGKISKQWSGFVREAFTDADN 293

Query: 232 FGISFPGDLDVRMKAVMLGACFLIDAMFYEKAGNRES 268
           FGI FP DLDV+MKAVMLGACFLID MF+E+ GN E 
Sbjct: 294 FGIQFPLDLDVKMKAVMLGACFLIDFMFFERTGNEEQ 330

May play a role in the antiviral response of interferon (IFN) by amplifying and enhancing the IFN response through increased expression of select subset of potent antiviral genes. May contribute to cytokine-regulated cell proliferation and differentiation.

Rattus norvegicus (taxid: 10116)

>sp|O15162|PLS1_HUMAN Phospholipid scramblase 1 OS=Homo sapiens GN=PLSCR1 PE=1 SV=1

 Score =  263 bits (673), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 134/230 (58%), Positives = 167/230 (72%), Gaps = 2/230 (0%)

Query: 38  WMNIPQGRPANCPPGLEYLTTVDQLMVKQKVELLEALIGWETNNKFTVKNAQGQKVFLAV 97
           WM  PQ  P NCPPGLEYL+ +DQ+++ Q++ELLE L G+ETNNK+ +KN+ GQ+V+ A 
Sbjct: 85  WMPAPQ-PPLNCPPGLEYLSQIDQILIHQQIELLEVLTGFETNNKYEIKNSFGQRVYFAA 143

Query: 98  EINDCCTRNCCGPLRPFEMKVLDNYKNEVIHFERPLACDSCWFPCCLQSLNVFSPPGALI 157
           E  DCCTRNCCGP RPF ++++DN   EVI  ERPL C SC  PCCLQ + + +PPG  I
Sbjct: 144 EDTDCCTRNCCGPSRPFTLRIIDNMGQEVITLERPLRCSSCCCPCCLQEIEIQAPPGVPI 203

Query: 158 GSIEQEWSLLTPIFVIKNGAGDIVLRIEGPICRYSMCGGDVDFKILSRDGQTEVGRISKQ 217
           G + Q W    P F I+N   + VL+I GP C    C GDVDF+I S D Q  VG+ISK 
Sbjct: 204 GYVIQTWHPCLPKFTIQNEKREDVLKISGP-CVVCSCCGDVDFEIKSLDEQCVVGKISKH 262

Query: 218 WSGLLREAFTDADYFGISFPGDLDVRMKAVMLGACFLIDAMFYEKAGNRE 267
           W+G+LREAFTDAD FGI FP DLDV+MKAVM+GACFLID MF+E  G++E
Sbjct: 263 WTGILREAFTDADNFGIQFPLDLDVKMKAVMIGACFLIDFMFFESTGSQE 312

May play a role in the antiviral response of interferon (IFN) by amplifying and enhancing the IFN response through increased expression of select subset of potent antiviral genes. May contribute to cytokine-regulated cell proliferation and differentiation.

Homo sapiens (taxid: 9606)

>sp|Q9DCW2|PLS2_MOUSE Phospholipid scramblase 2 OS=Mus musculus GN=Plscr2 PE=2 SV=3

 Score =  263 bits (672), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 124/233 (53%), Positives = 161/233 (69%), Gaps = 2/233 (0%)

Query: 29  KSTLWKNGGWMNIPQGRPANCPPGLEYLTTVDQLMVKQKVELLEALIGWETNNKFTVKNA 88
           ++ +  N  WM  P     NCPPGLEYL  +DQL++ Q+VELLE L G+ETNNKF +KN+
Sbjct: 74  QTIVLANTQWMPAPPPI-LNCPPGLEYLNQIDQLLIHQQVELLEVLTGFETNNKFEIKNS 132

Query: 89  QGQKVFLAVEINDCCTRNCCGPLRPFEMKVLDNYKNEVIHFERPLACDSCWFPCCLQSLN 148
            GQ V++AVE  DCCTRNCC   RPF +++LD+   EV+  ERPL C SC FPCCLQ + 
Sbjct: 133 LGQMVYVAVEDTDCCTRNCCEASRPFTLRILDHLGQEVMTLERPLKCSSCCFPCCLQEIE 192

Query: 149 VFSPPGALIGSIEQEWSLLTPIFVIKNGAGDIVLRIEGPICRYSMCGGDVDFKILSRDGQ 208
           + +PPG  IG + Q W    P   ++N   + VL++ GP C    C  D+DF+I S D  
Sbjct: 193 IQAPPGVPIGYVTQTWHPCLPKLTLQNDKRENVLKVVGP-CVACTCCSDIDFEIKSLDEV 251

Query: 209 TEVGRISKQWSGLLREAFTDADYFGISFPGDLDVRMKAVMLGACFLIDAMFYE 261
           T +G+I+KQWSG ++EAFTD+D FGI FP DL+V+MKAV LGACFLID MF+E
Sbjct: 252 TRIGKITKQWSGCVKEAFTDSDNFGIQFPLDLEVKMKAVTLGACFLIDYMFFE 304

May mediate accelerated ATP-independent bidirectional transbilayer migration of phospholipids upon binding calcium ions that results in a loss of phospholipid asymmetry in the plasma membrane. May play a central role in the initiation of fibrin clot formation, in the activation of mast cells and in the recognition of apoptotic and injured cells by the reticuloendothelial system.

Mus musculus (taxid: 10090)

>sp|Q6QBQ4|PLS3_RAT Phospholipid scramblase 3 OS=Rattus norvegicus GN=Plscr3 PE=2 SV=1

 Score =  214 bits (546), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 104/222 (46%), Positives = 138/222 (62%), Gaps = 1/222 (0%)

Query: 50  PPGLEYLTTVDQLMVKQKVELLEALIGWETNNKFTVKNAQGQKVFLAVEINDCCTRNCCG 109
           P GLE+L  +DQ+++ QK E +E  +GWET N++ +++  GQ++  A E ++CC R CCG
Sbjct: 74  PSGLEFLVQIDQILIHQKAERVETFLGWETCNRYELRSGTGQQLGQAAEESNCCARLCCG 133

Query: 110 PLRPFEMKVLDNYKNEVIHFERPLACDSCWFPCCLQSLNVFSPPGALIGSIEQEWSLLTP 169
             RP  +++ D    EV+   RPL C     PC LQ + V +PPG  IG + Q W    P
Sbjct: 134 ARRPLRIRLADPGDREVLRLLRPLHCGCSCCPCGLQEMEVQAPPGTTIGHVLQTWHPFIP 193

Query: 170 IFVIKNGAGDIVLRIEGPICRYSMCGGDVDFKILSRDGQTEVGRISKQWSGLLREAFTDA 229
            F I +     VLR+ GP C    CG D +F++ ++D    VGRISKQW GLLREA TDA
Sbjct: 194 KFSILDADRQPVLRVVGPCCTCG-CGTDTNFEVKTKDESRSVGRISKQWGGLLREALTDA 252

Query: 230 DYFGISFPGDLDVRMKAVMLGACFLIDAMFYEKAGNRESDGI 271
           D FG+ FP DLDVR+KAV+LGA FLID MF+EK G      I
Sbjct: 253 DDFGLQFPVDLDVRVKAVLLGATFLIDYMFFEKRGGAGPSAI 294

May mediate accelerated ATP-independent bidirectional transbilayer migration of phospholipids upon binding calcium ions that results in a loss of phospholipid asymmetry in the plasma membrane. May play a central role in the initiation of fibrin clot formation, in the activation of mast cells and in the recognition of apoptotic and injured cells by the reticuloendothelial system.

Rattus norvegicus (taxid: 10116)

>sp|A0PG75|PLS5_HUMAN Phospholipid scramblase family member 5 OS=Homo sapiens GN=PLSCR5 PE=2 SV=2

 Score =  214 bits (546), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 99/214 (46%), Positives = 143/214 (66%), Gaps = 1/214 (0%)

Query: 50  PPGLEYLTTVDQLMVKQKVELLEALIGWETNNKFTVKNAQGQKVFLAVEINDCCTRNCCG 109
           PPGLEYL+ +D +++ Q+VELL  ++G ET+NK+ +KN+ GQ+++ AVE + C  R  C 
Sbjct: 55  PPGLEYLSQLDLIIIHQQVELLGMILGTETSNKYEIKNSLGQRIYFAVEESICFNRTFCS 114

Query: 110 PLRPFEMKVLDNYKNEVIHFERPLACDSCWFPCCLQSLNVFSPPGALIGSIEQEWSLLTP 169
            LR   +++ DN   EVI   RPL C+SCW PC LQ L + +PPG ++G + Q+W    P
Sbjct: 115 TLRSCTLRITDNSGREVITVNRPLRCNSCWCPCYLQELEIQAPPGTIVGYVTQKWDPFLP 174

Query: 170 IFVIKNGAGDIVLRIEGPICRYSMCGGDVDFKILSRDGQTEVGRISKQWSGLLREAFTDA 229
            F I+N   + +L+I GP C    C GDVDF++ + + +  +G+ISK WSG + + FT+A
Sbjct: 175 KFTIQNANKEDILKIVGP-CVTCGCFGDVDFEVKTINEKLTIGKISKYWSGFVNDVFTNA 233

Query: 230 DYFGISFPGDLDVRMKAVMLGACFLIDAMFYEKA 263
           D FGI  P DLDV +KA M+GACFL D MF+E +
Sbjct: 234 DNFGIHVPADLDVTVKAAMIGACFLFDFMFFEHS 267

Homo sapiens (taxid: 9606)

>sp|Q9JIZ9|PLS3_MOUSE Phospholipid scramblase 3 OS=Mus musculus GN=Plscr3 PE=1 SV=1

 Score =  214 bits (546), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 105/222 (47%), Positives = 139/222 (62%), Gaps = 1/222 (0%)

Query: 50  PPGLEYLTTVDQLMVKQKVELLEALIGWETNNKFTVKNAQGQKVFLAVEINDCCTRNCCG 109
           PPGLE+L  +DQ+++ QK E +E  +GWET N + +++  GQ++  A E ++CC R CCG
Sbjct: 74  PPGLEFLVQIDQILIHQKAERVETFLGWETCNMYELRSGTGQQLGQAAEESNCCARLCCG 133

Query: 110 PLRPFEMKVLDNYKNEVIHFERPLACDSCWFPCCLQSLNVFSPPGALIGSIEQEWSLLTP 169
             RPF +++ D    EV+   RPL C     PC LQ + V +PPG  IG + Q W    P
Sbjct: 134 ARRPFRIRLADPGDREVLRLLRPLHCGCSCCPCGLQEMEVQAPPGTTIGHVLQTWHPFLP 193

Query: 170 IFVIKNGAGDIVLRIEGPICRYSMCGGDVDFKILSRDGQTEVGRISKQWSGLLREAFTDA 229
            F I +     VLR+ GP C    CG D +F++ ++D    VGRISKQW GLLREA TDA
Sbjct: 194 KFSILDADRQPVLRVVGP-CWTCGCGTDTNFEVKTKDESRSVGRISKQWGGLLREALTDA 252

Query: 230 DYFGISFPGDLDVRMKAVMLGACFLIDAMFYEKAGNRESDGI 271
           D FG+ FP DLDV++KAV+LGA FLID MF+EK G      I
Sbjct: 253 DDFGLQFPVDLDVKVKAVLLGATFLIDYMFFEKRGGAGPSAI 294

May mediate accelerated ATP-independent bidirectional transbilayer migration of phospholipids upon binding calcium ions that results in a loss of phospholipid asymmetry in the plasma membrane. May play a central role in the initiation of fibrin clot formation, in the activation of mast cells and in the recognition of apoptotic and injured cells by the reticuloendothelial system.

Mus musculus (taxid: 10090)

>sp|Q9NRY6|PLS3_HUMAN Phospholipid scramblase 3 OS=Homo sapiens GN=PLSCR3 PE=1 SV=2

 Score =  213 bits (543), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 103/216 (47%), Positives = 137/216 (63%), Gaps = 1/216 (0%)

Query: 50  PPGLEYLTTVDQLMVKQKVELLEALIGWETNNKFTVKNAQGQKVFLAVEINDCCTRNCCG 109
           P GLE+L  +DQ+++ QK E +E  +GWET N++ +++  GQ +  A E ++CC R CCG
Sbjct: 73  PSGLEFLVQIDQILIHQKAERVETFLGWETCNRYELRSGAGQPLGQAAEESNCCARLCCG 132

Query: 110 PLRPFEMKVLDNYKNEVIHFERPLACDSCWFPCCLQSLNVFSPPGALIGSIEQEWSLLTP 169
             RP  +++ D    EV+   RPL C     PC LQ + V +PPG  IG + Q W    P
Sbjct: 133 ARRPLRVRLADPGDREVLRLLRPLHCGCSCCPCGLQEMEVQAPPGTTIGHVLQTWHPFLP 192

Query: 170 IFVIKNGAGDIVLRIEGPICRYSMCGGDVDFKILSRDGQTEVGRISKQWSGLLREAFTDA 229
            F I++     VLR+ GP C    CG D +F++ +RD    VGRISKQW GL+REA TDA
Sbjct: 193 KFSIQDADRQTVLRVVGP-CWTCGCGTDTNFEVKTRDESRSVGRISKQWGGLVREALTDA 251

Query: 230 DYFGISFPGDLDVRMKAVMLGACFLIDAMFYEKAGN 265
           D FG+ FP DLDVR+KAV+LGA FLID MF+EK G 
Sbjct: 252 DDFGLQFPLDLDVRVKAVLLGATFLIDYMFFEKRGG 287

May mediate accelerated ATP-independent bidirectional transbilayer migration of phospholipids upon binding calcium ions that results in a loss of phospholipid asymmetry in the plasma membrane. May play a central role in the initiation of fibrin clot formation, in the activation of mast cells and in the recognition of apoptotic and injured cells by the reticuloendothelial system.

Homo sapiens (taxid: 9606)

>sp|Q9NRY7|PLS2_HUMAN Phospholipid scramblase 2 OS=Homo sapiens GN=PLSCR2 PE=1 SV=1

 Score =  208 bits (529), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 111/212 (52%), Positives = 144/212 (67%), Gaps = 1/212 (0%)

Query: 52  GLEYLTTVDQLMVKQKVELLEALIGWETNNKFTVKNAQGQKVFLAVEINDCCTRNCCGPL 111
           GLEYL+ +D +++ Q++ELLE L  +E++N + +KN+ GQ+++ A E  + C RNCCG  
Sbjct: 13  GLEYLSQIDMILIHQQIELLEVLFSFESSNMYEIKNSFGQRIYFAAEDTNFCIRNCCGRS 72

Query: 112 RPFEMKVLDNYKNEVIHFERPLACDSCWFPCCLQSLNVFSPPGALIGSIEQEWSLLTPIF 171
           RPF +++ DN   EVI  ERPL C+ C  PCCLQ + + +PPG  +G + Q W      F
Sbjct: 73  RPFTLRITDNVGREVITLERPLRCNCCCCPCCLQEIEIQAPPGVPVGYVTQTWHPCLTKF 132

Query: 172 VIKNGAGDIVLRIEGPICRYSMCGGDVDFKILSRDGQTEVGRISKQWSGLLREAFTDADY 231
            IKN   + VL+I GP C    C   VDF+I S D Q  VGRISK WSG LREAFTDAD 
Sbjct: 133 TIKNQKREDVLKISGP-CIVCSCIAGVDFEITSLDEQIVVGRISKHWSGFLREAFTDADN 191

Query: 232 FGISFPGDLDVRMKAVMLGACFLIDAMFYEKA 263
           FGI FP DLDV+MKAVM+GACFLID MF+E+ 
Sbjct: 192 FGIQFPRDLDVKMKAVMIGACFLIDYMFFERT 223

May mediate accelerated ATP-independent bidirectional transbilayer migration of phospholipids upon binding calcium ions that results in a loss of phospholipid asymmetry in the plasma membrane. May play a central role in the initiation of fibrin clot formation, in the activation of mast cells and in the recognition of apoptotic and injured cells by the reticuloendothelial system.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	274
195169234	399	GL11735 [Drosophila persimilis] gi|19410	0.854	0.586	0.721	5e-97
125979471	397	GA16644 [Drosophila pseudoobscura pseudo	0.854	0.589	0.721	8e-97
195493133	408	GE20277 [Drosophila yakuba] gi|194180389	0.861	0.578	0.707	4e-96
357605731	234	hypothetical protein KGM_11873 [Danaus p	0.854	1.0	0.686	2e-95
195442698	399	GK24075 [Drosophila willistoni] gi|19416	0.861	0.591	0.711	3e-95
194750969	392	GF23835 [Drosophila ananassae] gi|190625	0.854	0.596	0.713	6e-95
195326539	416	GM24815 [Drosophila sechellia] gi|194118	0.861	0.567	0.694	3e-94
85726470	416	scramblase 1, isoform A [Drosophila mela	0.861	0.567	0.694	4e-94
194868305	408	GG13979 [Drosophila erecta] gi|190654052	0.901	0.605	0.672	6e-94
195589252	416	GD12867 [Drosophila simulans] gi|1941963	0.861	0.567	0.694	6e-94

>gi|195169234|ref|XP_002025430.1| GL11735 [Drosophila persimilis] gi|194108898|gb|EDW30941.1| GL11735 [Drosophila persimilis]

 Score =  359 bits (922), Expect = 5e-97,   Method: Compositional matrix adjust.
 Identities = 171/237 (72%), Positives = 200/237 (84%), Gaps = 3/237 (1%)

Query: 38  WMNIPQGRPANCPPGLEYLTTVDQLMVKQKVELLEALIGWETNNKFTVKNAQGQKVFLAV 97
           WM+IP G P NCP GLEYLTT+DQL+VKQKVELLEA  G+ETNNKF++KNA GQKV+ AV
Sbjct: 166 WMSIPAGIP-NCPRGLEYLTTIDQLLVKQKVELLEAFTGFETNNKFSIKNALGQKVYYAV 224

Query: 98  EINDCCTRNCCGPLRPFEMKVLDNYKNEVIHFERPLACDSCWFPCCLQSLNVFSPPGALI 157
           E NDCCTRNCCGP RPFEMKV DNY+ EVIH  RPLAC +C FPCCLQS+ V +PPG +I
Sbjct: 225 EDNDCCTRNCCGPSRPFEMKVFDNYRQEVIHMHRPLACSACCFPCCLQSIEVSAPPGNVI 284

Query: 158 GSIEQEWSLLTPIFVIKNGAGDIVLRIEGPICRYSMCGGDVDFKILSRDGQTEVGRISKQ 217
           G+IEQEWS+ +P F I N  GD VLRIEGP+C YS+C GDV+F ++S  G+ ++G+ISKQ
Sbjct: 285 GTIEQEWSICSPSFRILNHIGDTVLRIEGPLCTYSLC-GDVEFNVVSLTGE-KIGKISKQ 342

Query: 218 WSGLLREAFTDADYFGISFPGDLDVRMKAVMLGACFLIDAMFYEKAGNRESDGIGML 274
           WSGL RE FTDAD+FGISFP DLDVRMKAV+LGA FLIDAMF+EK+GNRE+DG GML
Sbjct: 343 WSGLAREIFTDADFFGISFPLDLDVRMKAVLLGATFLIDAMFFEKSGNRETDGPGML 399

Source: Drosophila persimilis

Species: Drosophila persimilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|125979471|ref|XP_001353768.1| GA16644 [Drosophila pseudoobscura pseudoobscura] gi|54640751|gb|EAL29502.1| GA16644 [Drosophila pseudoobscura pseudoobscura]

 Score =  359 bits (921), Expect = 8e-97,   Method: Compositional matrix adjust.
 Identities = 171/237 (72%), Positives = 200/237 (84%), Gaps = 3/237 (1%)

Query: 38  WMNIPQGRPANCPPGLEYLTTVDQLMVKQKVELLEALIGWETNNKFTVKNAQGQKVFLAV 97
           WM+IP G P NCP GLEYLTT+DQL+VKQKVELLEA  G+ETNNKF++KNA GQKV+ AV
Sbjct: 164 WMSIPAGIP-NCPRGLEYLTTIDQLLVKQKVELLEAFTGFETNNKFSIKNALGQKVYYAV 222

Query: 98  EINDCCTRNCCGPLRPFEMKVLDNYKNEVIHFERPLACDSCWFPCCLQSLNVFSPPGALI 157
           E NDCCTRNCCGP RPFEMKV DNY+ EVIH  RPLAC +C FPCCLQS+ V +PPG +I
Sbjct: 223 EDNDCCTRNCCGPSRPFEMKVFDNYRQEVIHMHRPLACSACCFPCCLQSIEVSAPPGNVI 282

Query: 158 GSIEQEWSLLTPIFVIKNGAGDIVLRIEGPICRYSMCGGDVDFKILSRDGQTEVGRISKQ 217
           G+IEQEWS+ +P F I N  GD VLRIEGP+C YS+C GDV+F ++S  G+ ++G+ISKQ
Sbjct: 283 GTIEQEWSICSPSFRILNHIGDTVLRIEGPLCTYSLC-GDVEFNVVSLTGE-KIGKISKQ 340

Query: 218 WSGLLREAFTDADYFGISFPGDLDVRMKAVMLGACFLIDAMFYEKAGNRESDGIGML 274
           WSGL RE FTDAD+FGISFP DLDVRMKAV+LGA FLIDAMF+EK+GNRE+DG GML
Sbjct: 341 WSGLAREIFTDADFFGISFPLDLDVRMKAVLLGATFLIDAMFFEKSGNRETDGPGML 397

Source: Drosophila pseudoobscura pseudoobscura

Species: Drosophila pseudoobscura

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195493133|ref|XP_002094288.1| GE20277 [Drosophila yakuba] gi|194180389|gb|EDW94000.1| GE20277 [Drosophila yakuba]

 Score =  357 bits (915), Expect = 4e-96,   Method: Compositional matrix adjust.
 Identities = 169/239 (70%), Positives = 199/239 (83%), Gaps = 3/239 (1%)

Query: 36  GGWMNIPQGRPANCPPGLEYLTTVDQLMVKQKVELLEALIGWETNNKFTVKNAQGQKVFL 95
           G WM+IP G P NCP GLEYLTT+DQL+VKQKVELLEA  G+ETNNKFT+KNA GQKV+ 
Sbjct: 173 GDWMSIPTGIP-NCPRGLEYLTTIDQLLVKQKVELLEAFTGFETNNKFTIKNALGQKVYF 231

Query: 96  AVEINDCCTRNCCGPLRPFEMKVLDNYKNEVIHFERPLACDSCWFPCCLQSLNVFSPPGA 155
           A E NDCCTRNCCGP RPF+M+V DN++ EVIH  RPLAC SC FPCCLQS+ V +PPG 
Sbjct: 232 AAEDNDCCTRNCCGPARPFDMRVFDNFQQEVIHMHRPLACSSCLFPCCLQSIEVSAPPGN 291

Query: 156 LIGSIEQEWSLLTPIFVIKNGAGDIVLRIEGPICRYSMCGGDVDFKILSRDGQTEVGRIS 215
           +IGSIEQEWS+ +P F I N  GD V+RIEGP C +S+C GDV+F ++S  G+ ++G+IS
Sbjct: 292 VIGSIEQEWSICSPSFRILNHVGDTVMRIEGPFCTFSLC-GDVEFNVVSLTGE-KIGKIS 349

Query: 216 KQWSGLLREAFTDADYFGISFPGDLDVRMKAVMLGACFLIDAMFYEKAGNRESDGIGML 274
           KQWSGL RE FTDAD+FGI+FP DLDVRMKAV+LGA FLIDAMF+EKAGNRE+DG GML
Sbjct: 350 KQWSGLAREIFTDADFFGINFPLDLDVRMKAVLLGATFLIDAMFFEKAGNRETDGPGML 408

Source: Drosophila yakuba

Species: Drosophila yakuba

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|357605731|gb|EHJ64756.1| hypothetical protein KGM_11873 [Danaus plexippus]

 Score =  354 bits (908), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 162/236 (68%), Positives = 201/236 (85%), Gaps = 2/236 (0%)

Query: 39  MNIPQGRPANCPPGLEYLTTVDQLMVKQKVELLEALIGWETNNKFTVKNAQGQKVFLAVE 98
           M IPQG   NCPPGLEYL+ +DQL+V QKVELLEA +G+ETNNK+T+KN+ GQKV+ AVE
Sbjct: 1   MTIPQGL-TNCPPGLEYLSLIDQLLVHQKVELLEAFVGFETNNKYTIKNSLGQKVYYAVE 59

Query: 99  INDCCTRNCCGPLRPFEMKVLDNYKNEVIHFERPLACDSCWFPCCLQSLNVFSPPGALIG 158
            NDCCTRNCCGP RPF+MK++DN+KNEVIH  RPLACDSC  PC LQ++ V SPPG +IG
Sbjct: 60  DNDCCTRNCCGPTRPFDMKIMDNFKNEVIHLHRPLACDSCLCPCWLQTMEVTSPPGTVIG 119

Query: 159 SIEQEWSLLTPIFVIKNGAGDIVLRIEGPICRYSMCGGDVDFKILSRDGQTEVGRISKQW 218
           SIEQ+WS+  P + IKN AGD+VL+I+GP+C +S+C GD++F + SRDG+T+VG+I+KQW
Sbjct: 120 SIEQQWSICKPCYDIKNAAGDVVLKIKGPVCTFSIC-GDIEFNVYSRDGETKVGKITKQW 178

Query: 219 SGLLREAFTDADYFGISFPGDLDVRMKAVMLGACFLIDAMFYEKAGNRESDGIGML 274
           SGL RE FTD+DYFGI+FP DLDV++KAV+LGACFLID MF+EK+GN ESD  GML
Sbjct: 179 SGLAREVFTDSDYFGITFPMDLDVKIKAVLLGACFLIDFMFFEKSGNNESDRPGML 234

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195442698|ref|XP_002069083.1| GK24075 [Drosophila willistoni] gi|194165168|gb|EDW80069.1| GK24075 [Drosophila willistoni]

 Score =  353 bits (907), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 170/239 (71%), Positives = 198/239 (82%), Gaps = 3/239 (1%)

Query: 36  GGWMNIPQGRPANCPPGLEYLTTVDQLMVKQKVELLEALIGWETNNKFTVKNAQGQKVFL 95
           G WMNIP G P NCP GLEYLTT+DQL+VKQKVELLEA  G+ETNNKF++KNA GQKV+ 
Sbjct: 164 GDWMNIPTGIP-NCPRGLEYLTTIDQLLVKQKVELLEAFTGFETNNKFSIKNALGQKVYY 222

Query: 96  AVEINDCCTRNCCGPLRPFEMKVLDNYKNEVIHFERPLACDSCWFPCCLQSLNVFSPPGA 155
           AVE NDCCTRNCCGP RPF+MK+ DN++ EVIH  RPLAC +C FPCCLQSL V +PPG 
Sbjct: 223 AVEDNDCCTRNCCGPSRPFDMKIFDNFQQEVIHLYRPLACSACCFPCCLQSLEVSAPPGN 282

Query: 156 LIGSIEQEWSLLTPIFVIKNGAGDIVLRIEGPICRYSMCGGDVDFKILSRDGQTEVGRIS 215
           +IG IEQEWS+ +P F I N  GD VLRIEGP C +S+C GDV+F ++S  G+ +VG+IS
Sbjct: 283 VIGRIEQEWSICSPSFRILNHIGDTVLRIEGPFCTFSLC-GDVEFNVVSLTGE-KVGKIS 340

Query: 216 KQWSGLLREAFTDADYFGISFPGDLDVRMKAVMLGACFLIDAMFYEKAGNRESDGIGML 274
           KQWSG  RE FTDAD+FGI+FP DLDVRMKAV+LGA FLIDAMF+EK+GNRESDG GML
Sbjct: 341 KQWSGFAREIFTDADFFGINFPQDLDVRMKAVLLGATFLIDAMFFEKSGNRESDGPGML 399

Source: Drosophila willistoni

Species: Drosophila willistoni

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194750969|ref|XP_001957802.1| GF23835 [Drosophila ananassae] gi|190625084|gb|EDV40608.1| GF23835 [Drosophila ananassae]

 Score =  353 bits (905), Expect = 6e-95,   Method: Compositional matrix adjust.
 Identities = 169/237 (71%), Positives = 199/237 (83%), Gaps = 3/237 (1%)

Query: 38  WMNIPQGRPANCPPGLEYLTTVDQLMVKQKVELLEALIGWETNNKFTVKNAQGQKVFLAV 97
           WM+IP G P NCP GLEYLTT+DQL+VKQKVELLEA  G+ETNNKF++KNA GQKV+ AV
Sbjct: 159 WMSIPSGIP-NCPRGLEYLTTIDQLLVKQKVELLEAFTGFETNNKFSIKNALGQKVYYAV 217

Query: 98  EINDCCTRNCCGPLRPFEMKVLDNYKNEVIHFERPLACDSCWFPCCLQSLNVFSPPGALI 157
           E NDCCTRNCCGP RPF+MKV DN++NEVIH  RPLAC SC FPCCLQS+ V +PPG +I
Sbjct: 218 EDNDCCTRNCCGPARPFDMKVFDNFQNEVIHMHRPLACSSCLFPCCLQSIEVSAPPGNVI 277

Query: 158 GSIEQEWSLLTPIFVIKNGAGDIVLRIEGPICRYSMCGGDVDFKILSRDGQTEVGRISKQ 217
           G+IEQEWS+ +P F I N  GD VLRIEGP C +S+C GDV+F ++S  G+ +VG+ISKQ
Sbjct: 278 GTIEQEWSICSPSFRILNHIGDTVLRIEGPFCTFSLC-GDVEFNVVSLTGE-KVGKISKQ 335

Query: 218 WSGLLREAFTDADYFGISFPGDLDVRMKAVMLGACFLIDAMFYEKAGNRESDGIGML 274
           WSGL RE FTDAD+FGISFP DLDVRMKAV+LGA FLIDAMF+EK+GN+E+D  GML
Sbjct: 336 WSGLAREIFTDADFFGISFPLDLDVRMKAVLLGATFLIDAMFFEKSGNQETDRPGML 392

Source: Drosophila ananassae

Species: Drosophila ananassae

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195326539|ref|XP_002029986.1| GM24815 [Drosophila sechellia] gi|194118929|gb|EDW40972.1| GM24815 [Drosophila sechellia]

 Score =  350 bits (899), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 166/239 (69%), Positives = 198/239 (82%), Gaps = 3/239 (1%)

Query: 36  GGWMNIPQGRPANCPPGLEYLTTVDQLMVKQKVELLEALIGWETNNKFTVKNAQGQKVFL 95
           G WM+IP G P NCP GLEYLTT+DQL+VKQKVELLEA  G+ETNNKFT+KNA GQKV+ 
Sbjct: 181 GDWMSIPTGIP-NCPRGLEYLTTIDQLLVKQKVELLEAFTGFETNNKFTIKNALGQKVYF 239

Query: 96  AVEINDCCTRNCCGPLRPFEMKVLDNYKNEVIHFERPLACDSCWFPCCLQSLNVFSPPGA 155
           A E NDCCTRNCCGP RPF+M+V DN++ EVIH  RPLAC SC FPCCLQS+ V +PPG 
Sbjct: 240 AAEDNDCCTRNCCGPARPFDMRVFDNFQQEVIHMHRPLACSSCLFPCCLQSIEVSAPPGN 299

Query: 156 LIGSIEQEWSLLTPIFVIKNGAGDIVLRIEGPICRYSMCGGDVDFKILSRDGQTEVGRIS 215
           +IG+IEQEWS+ +P F I N  GD V+RIEGP C +S+C GDV+F ++S  G+ ++G+IS
Sbjct: 300 VIGTIEQEWSICSPSFRILNHVGDTVMRIEGPFCTFSLC-GDVEFNVVSLTGE-KIGKIS 357

Query: 216 KQWSGLLREAFTDADYFGISFPGDLDVRMKAVMLGACFLIDAMFYEKAGNRESDGIGML 274
           KQWSGL RE FTDAD+FGI+FP DLDVRMKAV+LGA FLIDAMF+EKAGN+E+D  GML
Sbjct: 358 KQWSGLAREIFTDADFFGINFPLDLDVRMKAVLLGATFLIDAMFFEKAGNQETDRPGML 416

Source: Drosophila sechellia

Species: Drosophila sechellia

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|85726470|ref|NP_648389.3| scramblase 1, isoform A [Drosophila melanogaster] gi|16197907|gb|AAL13715.1| GM13876p [Drosophila melanogaster] gi|84796119|gb|AAF50165.3| scramblase 1, isoform A [Drosophila melanogaster] gi|220944796|gb|ACL84941.1| scramb1-PA [synthetic construct] gi|220954576|gb|ACL89831.1| scramb1-PA [synthetic construct]

 Score =  350 bits (898), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 166/239 (69%), Positives = 198/239 (82%), Gaps = 3/239 (1%)

Query: 36  GGWMNIPQGRPANCPPGLEYLTTVDQLMVKQKVELLEALIGWETNNKFTVKNAQGQKVFL 95
           G WM+IP G P NCP GLEYLTT+DQL+VKQKVELLEA  G+ETNNKFT+KNA GQKV+ 
Sbjct: 181 GDWMSIPTGIP-NCPRGLEYLTTIDQLLVKQKVELLEAFTGFETNNKFTIKNALGQKVYF 239

Query: 96  AVEINDCCTRNCCGPLRPFEMKVLDNYKNEVIHFERPLACDSCWFPCCLQSLNVFSPPGA 155
           A E NDCCTRNCCGP RPF+M+V DN++ EVIH  RPLAC SC FPCCLQS+ V +PPG 
Sbjct: 240 AAEDNDCCTRNCCGPARPFDMRVFDNFQQEVIHMHRPLACSSCLFPCCLQSIEVSAPPGN 299

Query: 156 LIGSIEQEWSLLTPIFVIKNGAGDIVLRIEGPICRYSMCGGDVDFKILSRDGQTEVGRIS 215
           +IG+IEQEWS+ +P F I N  GD V+RIEGP C +S+C GDV+F ++S  G+ ++G+IS
Sbjct: 300 VIGTIEQEWSICSPSFRILNHVGDTVMRIEGPFCTFSLC-GDVEFNVVSLTGE-KIGKIS 357

Query: 216 KQWSGLLREAFTDADYFGISFPGDLDVRMKAVMLGACFLIDAMFYEKAGNRESDGIGML 274
           KQWSGL RE FTDAD+FGI+FP DLDVRMKAV+LGA FLIDAMF+EKAGN+E+D  GML
Sbjct: 358 KQWSGLAREIFTDADFFGINFPLDLDVRMKAVLLGATFLIDAMFFEKAGNQETDRPGML 416

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194868305|ref|XP_001972269.1| GG13979 [Drosophila erecta] gi|190654052|gb|EDV51295.1| GG13979 [Drosophila erecta]

 Score =  349 bits (896), Expect = 6e-94,   Method: Compositional matrix adjust.
 Identities = 168/250 (67%), Positives = 199/250 (79%), Gaps = 3/250 (1%)

Query: 25  RKAIKSTLWKNGGWMNIPQGRPANCPPGLEYLTTVDQLMVKQKVELLEALIGWETNNKFT 84
           R  I S     G WM+IP G P NCP GLEYLTT+DQL+VKQKVELLEA  G+ETNNKF 
Sbjct: 162 RPRIPSRGGTAGDWMSIPTGIP-NCPRGLEYLTTIDQLLVKQKVELLEAFTGFETNNKFI 220

Query: 85  VKNAQGQKVFLAVEINDCCTRNCCGPLRPFEMKVLDNYKNEVIHFERPLACDSCWFPCCL 144
           +KNA GQKV+ A E NDCCTRNCCGP RPF+M+V DN++ EVIH  RPLAC SC FPCCL
Sbjct: 221 IKNALGQKVYFAAEDNDCCTRNCCGPSRPFDMRVFDNFQQEVIHMHRPLACSSCLFPCCL 280

Query: 145 QSLNVFSPPGALIGSIEQEWSLLTPIFVIKNGAGDIVLRIEGPICRYSMCGGDVDFKILS 204
           QS+ V +PPG +IG+IEQEWS+ +P F I N  GD V+RIEGP C YS+C GDV+F ++S
Sbjct: 281 QSIEVSAPPGNVIGTIEQEWSICSPSFRILNHVGDTVMRIEGPFCTYSIC-GDVEFNVVS 339

Query: 205 RDGQTEVGRISKQWSGLLREAFTDADYFGISFPGDLDVRMKAVMLGACFLIDAMFYEKAG 264
             G+ ++G+ISKQWSGL RE FTDAD+FGI+FP DLDVRMKAV+LGA FLIDAMF+EK+ 
Sbjct: 340 LTGE-KIGKISKQWSGLAREIFTDADFFGINFPLDLDVRMKAVLLGATFLIDAMFFEKSA 398

Query: 265 NRESDGIGML 274
           N+ESD  GML
Sbjct: 399 NQESDRPGML 408

Source: Drosophila erecta

Species: Drosophila erecta

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195589252|ref|XP_002084369.1| GD12867 [Drosophila simulans] gi|194196378|gb|EDX09954.1| GD12867 [Drosophila simulans]

 Score =  349 bits (896), Expect = 6e-94,   Method: Compositional matrix adjust.
 Identities = 166/239 (69%), Positives = 198/239 (82%), Gaps = 3/239 (1%)

Query: 36  GGWMNIPQGRPANCPPGLEYLTTVDQLMVKQKVELLEALIGWETNNKFTVKNAQGQKVFL 95
           G WM+IP G P NCP GLEYLTT+DQL+VKQKVELLEA  G+ETNNKFT+KNA GQKV+ 
Sbjct: 181 GDWMSIPTGIP-NCPRGLEYLTTIDQLLVKQKVELLEAFTGFETNNKFTIKNALGQKVYF 239

Query: 96  AVEINDCCTRNCCGPLRPFEMKVLDNYKNEVIHFERPLACDSCWFPCCLQSLNVFSPPGA 155
           A E NDCCTRNCCGP RPF+M+V DN++ EVIH  RPLAC SC FPCCLQS+ V +PPG 
Sbjct: 240 AAEDNDCCTRNCCGPARPFDMRVFDNFQQEVIHMHRPLACSSCLFPCCLQSIEVSAPPGN 299

Query: 156 LIGSIEQEWSLLTPIFVIKNGAGDIVLRIEGPICRYSMCGGDVDFKILSRDGQTEVGRIS 215
           +IG+IEQEWS+ +P F I N  GD V+RIEGP C +S+C GDV+F I+S  G+ ++G+IS
Sbjct: 300 VIGTIEQEWSICSPSFRILNHVGDTVMRIEGPFCTFSLC-GDVEFNIVSLTGE-KIGKIS 357

Query: 216 KQWSGLLREAFTDADYFGISFPGDLDVRMKAVMLGACFLIDAMFYEKAGNRESDGIGML 274
           KQWSGL R+ FTDAD+FGI+FP DLDVRMKAV+LGA FLIDAMF+EKAGN+E+D  GML
Sbjct: 358 KQWSGLARDIFTDADFFGINFPLDLDVRMKAVLLGATFLIDAMFFEKAGNQETDRPGML 416

Source: Drosophila simulans

Species: Drosophila simulans

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	274
FB|FBgn0052056	416	scramb1 "scramblase 1" [Drosop	0.861	0.567	0.694	3.5e-91
UNIPROTKB|F7FQB2	301	LOC100091857 "Uncharacterized	0.824	0.750	0.614	4.5e-75
UNIPROTKB|F7IKX5	317	LOC100408594 "Uncharacterized	0.832	0.719	0.582	7.5e-73
UNIPROTKB|O15162	318	PLSCR1 "Phospholipid scramblas	0.832	0.716	0.582	1.6e-72
MGI|MGI:893575	328	Plscr1 "phospholipid scramblas	0.839	0.701	0.572	4.1e-72
UNIPROTKB|F7DWS2	318	PLSCR1 "Uncharacterized protei	0.832	0.716	0.573	6.7e-72
RGD|620521	335	Plscr1 "phospholipid scramblas	0.839	0.686	0.568	6.7e-72
UNIPROTKB|Q3ZBG9	293	PLSCR2 "Phospholipid scramblas	0.810	0.757	0.580	6.1e-71
FB|FBgn0035390	263	scramb2 "scramblase 2" [Drosop	0.821	0.855	0.575	6.3e-69
ZFIN|ZDB-GENE-040426-2517	314	plscr3b "phospholipid scrambla	0.813	0.710	0.56	1.7e-68

FB|FBgn0052056 scramb1 "scramblase 1" [Drosophila melanogaster (taxid:7227)]

 Score = 909 (325.0 bits), Expect = 3.5e-91, P = 3.5e-91
 Identities = 166/239 (69%), Positives = 198/239 (82%)

Query:    36 GGWMNIPQGRPANCPPGLEYLTTVDQLMVKQKVELLEALIGWETNNKFTVKNAQGQKVFL 95
             G WM+IP G P NCP GLEYLTT+DQL+VKQKVELLEA  G+ETNNKFT+KNA GQKV+ 
Sbjct:   181 GDWMSIPTGIP-NCPRGLEYLTTIDQLLVKQKVELLEAFTGFETNNKFTIKNALGQKVYF 239

Query:    96 AVEINDCCTRNCCGPLRPFEMKVLDNYKNEVIHFERPLACDSCWFPCCLQSLNVFSPPGA 155
             A E NDCCTRNCCGP RPF+M+V DN++ EVIH  RPLAC SC FPCCLQS+ V +PPG 
Sbjct:   240 AAEDNDCCTRNCCGPARPFDMRVFDNFQQEVIHMHRPLACSSCLFPCCLQSIEVSAPPGN 299

Query:   156 LIGSIEQEWSLLTPIFVIKNGAGDIVLRIEGPICRYSMCGGDVDFKILSRDGQTEVGRIS 215
             +IG+IEQEWS+ +P F I N  GD V+RIEGP C +S+CG DV+F ++S  G+ ++G+IS
Sbjct:   300 VIGTIEQEWSICSPSFRILNHVGDTVMRIEGPFCTFSLCG-DVEFNVVSLTGE-KIGKIS 357

Query:   216 KQWSGLLREAFTDADYFGISFPGDLDVRMKAVMLGACFLIDAMFYEKAGNRESDGIGML 274
             KQWSGL RE FTDAD+FGI+FP DLDVRMKAV+LGA FLIDAMF+EKAGN+E+D  GML
Sbjct:   358 KQWSGLAREIFTDADFFGINFPLDLDVRMKAVLLGATFLIDAMFFEKAGNQETDRPGML 416

GO:0017128 "phospholipid scramblase activity" evidence=ISS

GO:0017121 "phospholipid scrambling" evidence=ISS

GO:0007268 "synaptic transmission" evidence=IMP

GO:0048812 "neuron projection morphogenesis" evidence=IMP

UNIPROTKB|F7FQB2 LOC100091857 "Uncharacterized protein" [Ornithorhynchus anatinus (taxid:9258)]

 Score = 757 (271.5 bits), Expect = 4.5e-75, P = 4.5e-75
 Identities = 140/228 (61%), Positives = 168/228 (73%)

Query:    38 WMNIPQGRPANCPPGLEYLTTVDQLMVKQKVELLEALIGWETNNKFTVKNAQGQKVFLAV 97
             WM +P   P NCPPGLEYL+ VDQ+++ Q++ELLE L+G+ETNNK+ +KN+ GQ+V+ AV
Sbjct:    74 WM-VPPPLPPNCPPGLEYLSQVDQILIHQQIELLEVLVGFETNNKYEIKNSLGQRVYFAV 132

Query:    98 EINDCCTRNCCGPLRPFEMKVLDNYKNEVIHFERPLACDSCWFPCCLQSLNVFSPPGALI 157
             E NDCCTRNCCG  RPF +K+LDN   EVI  +RPL C SC FPCCLQ L V SPPG  I
Sbjct:   133 EENDCCTRNCCGAARPFTLKILDNLGREVISLQRPLRCSSCCFPCCLQELEVQSPPGVTI 192

Query:   158 GSIEQEWSLLTPIFVIKNGAGDIVLRIEGPICRYSMCGGDVDFKILSRDGQTEVGRISKQ 217
             G + Q W L  P F I+N     VL+I GP    S C  DVDF++   D QT VG+ISKQ
Sbjct:   193 GFVIQNWHLCLPKFTIQNEHRQDVLKITGPFVVCSCCS-DVDFQVKGLDDQTVVGKISKQ 251

Query:   218 WSGLLREAFTDADYFGISFPGDLDVRMKAVMLGACFLIDAMFYEKAGN 265
             WSGL+REAFTD+D FGI FP DLDV+MKAVMLGACFLID M++E  GN
Sbjct:   252 WSGLVREAFTDSDNFGIQFPLDLDVKMKAVMLGACFLIDFMYFENPGN 299

GO:0001077 "RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription" evidence=ISS

GO:0005154 "epidermal growth factor receptor binding" evidence=ISS

GO:0005509 "calcium ion binding" evidence=ISS

GO:0005730 "nucleolus" evidence=ISS

GO:0005794 "Golgi apparatus" evidence=ISS

GO:0005829 "cytosol" evidence=ISS

GO:0005887 "integral to plasma membrane" evidence=ISS

GO:0006915 "apoptotic process" evidence=ISS

GO:0017121 "phospholipid scrambling" evidence=ISS

GO:0017124 "SH3 domain binding" evidence=ISS

GO:0017128 "phospholipid scramblase activity" evidence=ISS

GO:0031012 "extracellular matrix" evidence=ISS

GO:0033003 "regulation of mast cell activation" evidence=ISS

GO:0042609 "CD4 receptor binding" evidence=ISS

GO:0045071 "negative regulation of viral genome replication" evidence=ISS

GO:0045089 "positive regulation of innate immune response" evidence=ISS

GO:0045121 "membrane raft" evidence=ISS

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=ISS

GO:0051607 "defense response to virus" evidence=ISS

GO:0060368 "regulation of Fc receptor mediated stimulatory signaling pathway" evidence=ISS

GO:2000373 "positive regulation of DNA topoisomerase (ATP-hydrolyzing) activity" evidence=ISS

UNIPROTKB|F7IKX5 LOC100408594 "Uncharacterized protein" [Callithrix jacchus (taxid:9483)]

 Score = 736 (264.1 bits), Expect = 7.5e-73, P = 7.5e-73
 Identities = 134/230 (58%), Positives = 168/230 (73%)

Query:    38 WMNIPQGRPANCPPGLEYLTTVDQLMVKQKVELLEALIGWETNNKFTVKNAQGQKVFLAV 97
             WM  P   P NCPPGLEYL+ +DQ+++ Q++ELLE L G+ETNNK+ +KN+ GQ+V+ AV
Sbjct:    84 WMPAPP-TPLNCPPGLEYLSQIDQILIHQQIELLEVLTGFETNNKYEIKNSFGQRVYFAV 142

Query:    98 EINDCCTRNCCGPLRPFEMKVLDNYKNEVIHFERPLACDSCWFPCCLQSLNVFSPPGALI 157
             E  DCCTRNCCGP RPF ++++DN   EV+  ERPL C SC  PCCLQ + + +PPG  +
Sbjct:   143 EDTDCCTRNCCGPSRPFTLRIIDNMGQEVMTLERPLRCSSCCCPCCLQEIEIQAPPGVPV 202

Query:   158 GSIEQEWSLLTPIFVIKNGAGDIVLRIEGPICRYSMCGGDVDFKILSRDGQTEVGRISKQ 217
             G + Q W    P F I+N   + VL+I GP C    C GDVDF+I S D Q  VG+ISK 
Sbjct:   203 GYVIQTWHPCLPKFTIQNEKREDVLKISGP-CVVCSCCGDVDFEIKSLDEQNIVGKISKH 261

Query:   218 WSGLLREAFTDADYFGISFPGDLDVRMKAVMLGACFLIDAMFYEKAGNRE 267
             W+G+LREAFTDAD FGI FP DLDV+MKAVMLGACFLID MF+E +GN+E
Sbjct:   262 WTGILREAFTDADNFGIQFPLDLDVKMKAVMLGACFLIDFMFFESSGNQE 311

GO:0001077 "RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription" evidence=ISS

GO:0005154 "epidermal growth factor receptor binding" evidence=ISS

GO:0005509 "calcium ion binding" evidence=ISS

GO:0005730 "nucleolus" evidence=ISS

GO:0005794 "Golgi apparatus" evidence=ISS

GO:0005829 "cytosol" evidence=ISS

GO:0005887 "integral to plasma membrane" evidence=ISS

GO:0006915 "apoptotic process" evidence=ISS

GO:0017121 "phospholipid scrambling" evidence=ISS

GO:0017124 "SH3 domain binding" evidence=ISS

GO:0017128 "phospholipid scramblase activity" evidence=ISS

GO:0031012 "extracellular matrix" evidence=ISS

GO:0033003 "regulation of mast cell activation" evidence=ISS

GO:0042609 "CD4 receptor binding" evidence=ISS

GO:0045071 "negative regulation of viral genome replication" evidence=ISS

GO:0045089 "positive regulation of innate immune response" evidence=ISS

GO:0045121 "membrane raft" evidence=ISS

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=ISS

GO:0051607 "defense response to virus" evidence=ISS

GO:0060368 "regulation of Fc receptor mediated stimulatory signaling pathway" evidence=ISS

GO:2000373 "positive regulation of DNA topoisomerase (ATP-hydrolyzing) activity" evidence=ISS

UNIPROTKB|O15162 PLSCR1 "Phospholipid scramblase 1" [Homo sapiens (taxid:9606)]

 Score = 733 (263.1 bits), Expect = 1.6e-72, P = 1.6e-72
 Identities = 134/230 (58%), Positives = 167/230 (72%)

Query:    38 WMNIPQGRPANCPPGLEYLTTVDQLMVKQKVELLEALIGWETNNKFTVKNAQGQKVFLAV 97
             WM  PQ  P NCPPGLEYL+ +DQ+++ Q++ELLE L G+ETNNK+ +KN+ GQ+V+ A 
Sbjct:    85 WMPAPQP-PLNCPPGLEYLSQIDQILIHQQIELLEVLTGFETNNKYEIKNSFGQRVYFAA 143

Query:    98 EINDCCTRNCCGPLRPFEMKVLDNYKNEVIHFERPLACDSCWFPCCLQSLNVFSPPGALI 157
             E  DCCTRNCCGP RPF ++++DN   EVI  ERPL C SC  PCCLQ + + +PPG  I
Sbjct:   144 EDTDCCTRNCCGPSRPFTLRIIDNMGQEVITLERPLRCSSCCCPCCLQEIEIQAPPGVPI 203

Query:   158 GSIEQEWSLLTPIFVIKNGAGDIVLRIEGPICRYSMCGGDVDFKILSRDGQTEVGRISKQ 217
             G + Q W    P F I+N   + VL+I GP C    C GDVDF+I S D Q  VG+ISK 
Sbjct:   204 GYVIQTWHPCLPKFTIQNEKREDVLKISGP-CVVCSCCGDVDFEIKSLDEQCVVGKISKH 262

Query:   218 WSGLLREAFTDADYFGISFPGDLDVRMKAVMLGACFLIDAMFYEKAGNRE 267
             W+G+LREAFTDAD FGI FP DLDV+MKAVM+GACFLID MF+E  G++E
Sbjct:   263 WTGILREAFTDADNFGIQFPLDLDVKMKAVMIGACFLIDFMFFESTGSQE 312

GO:0003677 "DNA binding" evidence=IEA

GO:0005887 "integral to plasma membrane" evidence=IDA

GO:0030168 "platelet activation" evidence=NAS

GO:0017121 "phospholipid scrambling" evidence=IDA

GO:0017128 "phospholipid scramblase activity" evidence=IDA

GO:0005509 "calcium ion binding" evidence=IDA;NAS

GO:0042609 "CD4 receptor binding" evidence=IPI

GO:0005829 "cytosol" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0019899 "enzyme binding" evidence=IPI

GO:0005730 "nucleolus" evidence=IDA

GO:2000373 "positive regulation of DNA topoisomerase (ATP-hydrolyzing) activity" evidence=IDA

GO:0001077 "RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription" evidence=IDA

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0006915 "apoptotic process" evidence=IDA

GO:0017124 "SH3 domain binding" evidence=IDA

GO:0045089 "positive regulation of innate immune response" evidence=IMP

GO:0035456 "response to interferon-beta" evidence=IMP

GO:0010628 "positive regulation of gene expression" evidence=IMP

GO:0051607 "defense response to virus" evidence=IMP

GO:0045071 "negative regulation of viral genome replication" evidence=IMP

GO:0031012 "extracellular matrix" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0005634 "nucleus" evidence=IDA

GO:0045121 "membrane raft" evidence=IDA

GO:0005154 "epidermal growth factor receptor binding" evidence=IPI

GO:0006953 "acute-phase response" evidence=ISS

GO:0033003 "regulation of mast cell activation" evidence=ISS

GO:0006659 "phosphatidylserine biosynthetic process" evidence=ISS

GO:0060368 "regulation of Fc receptor mediated stimulatory signaling pathway" evidence=ISS

MGI|MGI:893575 Plscr1 "phospholipid scramblase 1" [Mus musculus (taxid:10090)]

 Score = 729 (261.7 bits), Expect = 4.1e-72, P = 4.1e-72
 Identities = 134/234 (57%), Positives = 167/234 (71%)

Query:    36 GG--WMNIPQGRPANCPPGLEYLTTVDQLMVKQKVELLEALIGWETNNKFTVKNAQGQKV 93
             GG  WM  P   P NCPPGLEYL  +DQL+V Q++ELLE L G+ETNNK+ +KN+ GQ+V
Sbjct:    90 GGTPWMPAPPP-PLNCPPGLEYLAQIDQLLVHQQIELLEVLTGFETNNKYEIKNSLGQRV 148

Query:    94 FLAVEINDCCTRNCCGPLRPFEMKVLDNYKNEVIHFERPLACDSCWFPCCLQSLNVFSPP 153
             + AVE  DCCTRNCCG  RPF +++LDN   EV+  ERPL C SC FPCCLQ + + +PP
Sbjct:   149 YFAVEDTDCCTRNCCGASRPFTLRILDNLGREVMTLERPLRCSSCCFPCCLQEIEIQAPP 208

Query:   154 GALIGSIEQEWSLLTPIFVIKNGAGDIVLRIEGPICRYSMCGGDVDFKILSRDGQTEVGR 213
             G  +G + Q W    P F ++N     VL++ GP C    C  D+DF++ S D ++ VG+
Sbjct:   209 GVPVGYVTQTWHPCLPKFTLQNEKKQDVLKVVGP-CVVCSCCSDIDFELKSLDEESVVGK 267

Query:   214 ISKQWSGLLREAFTDADYFGISFPGDLDVRMKAVMLGACFLIDAMFYEKAGNRE 267
             ISKQWSG +REAFTDAD FGI FP DLDV+MKAVMLGACFLID MF+E+ GN E
Sbjct:   268 ISKQWSGFVREAFTDADNFGIQFPLDLDVKMKAVMLGACFLIDFMFFERTGNEE 321

GO:0001077 "RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription" evidence=ISO

GO:0003677 "DNA binding" evidence=IEA

GO:0005154 "epidermal growth factor receptor binding" evidence=ISO

GO:0005509 "calcium ion binding" evidence=ISO

GO:0005634 "nucleus" evidence=ISO;IDA

GO:0005730 "nucleolus" evidence=ISO

GO:0005794 "Golgi apparatus" evidence=ISO

GO:0005829 "cytosol" evidence=ISO;IDA

GO:0005886 "plasma membrane" evidence=ISO;IDA

GO:0005887 "integral to plasma membrane" evidence=ISO

GO:0006659 "phosphatidylserine biosynthetic process" evidence=IDA

GO:0006915 "apoptotic process" evidence=ISO;IDA

GO:0006955 "immune response" evidence=ISO

GO:0010225 "response to UV-C" evidence=IDA

GO:0010628 "positive regulation of gene expression" evidence=ISO

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0017121 "phospholipid scrambling" evidence=ISO;IDA

GO:0017124 "SH3 domain binding" evidence=ISO

GO:0017128 "phospholipid scramblase activity" evidence=ISO

GO:0019899 "enzyme binding" evidence=ISO

GO:0030099 "myeloid cell differentiation" evidence=IMP

GO:0031012 "extracellular matrix" evidence=ISO

GO:0032091 "negative regulation of protein binding" evidence=IDA

GO:0033003 "regulation of mast cell activation" evidence=ISO

GO:0035455 "response to interferon-alpha" evidence=IMP

GO:0035456 "response to interferon-beta" evidence=ISO

GO:0042609 "CD4 receptor binding" evidence=ISO

GO:0043065 "positive regulation of apoptotic process" evidence=IGI

GO:0045071 "negative regulation of viral genome replication" evidence=ISO;IMP

GO:0045089 "positive regulation of innate immune response" evidence=ISO;IMP

GO:0045121 "membrane raft" evidence=ISO

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=ISO

GO:0051607 "defense response to virus" evidence=ISO;IMP

GO:0060368 "regulation of Fc receptor mediated stimulatory signaling pathway" evidence=ISO

GO:0097193 "intrinsic apoptotic signaling pathway" evidence=IDA

GO:2000373 "positive regulation of DNA topoisomerase (ATP-hydrolyzing) activity" evidence=ISO

UNIPROTKB|F7DWS2 PLSCR1 "Uncharacterized protein" [Macaca mulatta (taxid:9544)]

 Score = 727 (261.0 bits), Expect = 6.7e-72, P = 6.7e-72
 Identities = 132/230 (57%), Positives = 167/230 (72%)

Query:    38 WMNIPQGRPANCPPGLEYLTTVDQLMVKQKVELLEALIGWETNNKFTVKNAQGQKVFLAV 97
             WM  P   P NCPPGLEYL+ +DQ+++ Q++ELLE L G+ETNNK+ +KN+ GQ+V+ A 
Sbjct:    85 WMPAPPP-PLNCPPGLEYLSQIDQILIHQQIELLEVLTGFETNNKYEIKNSFGQRVYFAA 143

Query:    98 EINDCCTRNCCGPLRPFEMKVLDNYKNEVIHFERPLACDSCWFPCCLQSLNVFSPPGALI 157
             E  DCCTRNCCGP RPF ++++DN   EVI  ERPL C+SC  PCCLQ + + +PPG  +
Sbjct:   144 EDTDCCTRNCCGPSRPFTLRIIDNMGREVITLERPLRCNSCCCPCCLQEIEIQAPPGVPV 203

Query:   158 GSIEQEWSLLTPIFVIKNGAGDIVLRIEGPICRYSMCGGDVDFKILSRDGQTEVGRISKQ 217
             G + Q W    P F I+N   + VL+I GP C    C GDVDF+I S D Q  VG+ISK 
Sbjct:   204 GYVIQTWHPCLPKFTIQNEKREDVLKISGP-CVVCSCCGDVDFEIKSLDEQCVVGKISKH 262

Query:   218 WSGLLREAFTDADYFGISFPGDLDVRMKAVMLGACFLIDAMFYEKAGNRE 267
             W+G+LREAFTDAD FGI FP DLDV+MKAVM+GACFLID MF+E  G++E
Sbjct:   263 WTGILREAFTDADNFGIQFPLDLDVKMKAVMIGACFLIDFMFFESTGSQE 312

GO:0001077 "RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription" evidence=ISS

GO:0005154 "epidermal growth factor receptor binding" evidence=ISS

GO:0005509 "calcium ion binding" evidence=ISS

GO:0005730 "nucleolus" evidence=ISS

GO:0005794 "Golgi apparatus" evidence=ISS

GO:0005829 "cytosol" evidence=ISS

GO:0005887 "integral to plasma membrane" evidence=ISS

GO:0006915 "apoptotic process" evidence=ISS

GO:0017121 "phospholipid scrambling" evidence=ISS

GO:0017124 "SH3 domain binding" evidence=ISS

GO:0017128 "phospholipid scramblase activity" evidence=ISS

GO:0031012 "extracellular matrix" evidence=ISS

GO:0033003 "regulation of mast cell activation" evidence=ISS

GO:0042609 "CD4 receptor binding" evidence=ISS

GO:0045071 "negative regulation of viral genome replication" evidence=ISS

GO:0045089 "positive regulation of innate immune response" evidence=ISS

GO:0045121 "membrane raft" evidence=ISS

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=ISS

GO:0051607 "defense response to virus" evidence=ISS

GO:0060368 "regulation of Fc receptor mediated stimulatory signaling pathway" evidence=ISS

GO:2000373 "positive regulation of DNA topoisomerase (ATP-hydrolyzing) activity" evidence=ISS

RGD|620521 Plscr1 "phospholipid scramblase 1" [Rattus norvegicus (taxid:10116)]

 Score = 727 (261.0 bits), Expect = 6.7e-72, P = 6.7e-72
 Identities = 133/234 (56%), Positives = 168/234 (71%)

Query:    36 GG--WMNIPQGRPANCPPGLEYLTTVDQLMVKQKVELLEALIGWETNNKFTVKNAQGQKV 93
             GG  WM  P   P +CPPGLEYLT +DQ++V Q++ELLE L G+ETNNK+ +KN+ GQ+V
Sbjct:    98 GGTPWMQAPPP-PLDCPPGLEYLTQIDQILVHQQIELLEVLTGFETNNKYEIKNSLGQRV 156

Query:    94 FLAVEINDCCTRNCCGPLRPFEMKVLDNYKNEVIHFERPLACDSCWFPCCLQSLNVFSPP 153
             + AVE  DCCTRNCCG  RPF +++LDN   EV+  ERPL C SC FPCCLQ + + +PP
Sbjct:   157 YFAVEDTDCCTRNCCGASRPFTLRILDNMGREVMTLERPLRCSSCCFPCCLQEIEIQAPP 216

Query:   154 GALIGSIEQEWSLLTPIFVIKNGAGDIVLRIEGPICRYSMCGGDVDFKILSRDGQTEVGR 213
             G  +G + Q W    P F ++N     VL++ GP C    C  D+DF++ S D ++ VG+
Sbjct:   217 GVPVGYVIQTWHPCLPKFTLQNEKRQDVLKVVGP-CVVCSCCSDIDFELKSLDEESVVGK 275

Query:   214 ISKQWSGLLREAFTDADYFGISFPGDLDVRMKAVMLGACFLIDAMFYEKAGNRE 267
             ISKQWSG +REAFTDAD FGI FP DLDV+MKAVMLGACFLID MF+E+ GN E
Sbjct:   276 ISKQWSGFVREAFTDADNFGIQFPLDLDVKMKAVMLGACFLIDFMFFERTGNEE 329

GO:0001077 "RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription" evidence=ISO;ISS

GO:0003677 "DNA binding" evidence=IEA

GO:0005154 "epidermal growth factor receptor binding" evidence=ISO;ISS

GO:0005509 "calcium ion binding" evidence=ISO;ISS

GO:0005634 "nucleus" evidence=IEA;ISO

GO:0005730 "nucleolus" evidence=ISO;ISS

GO:0005794 "Golgi apparatus" evidence=ISO;ISS

GO:0005829 "cytosol" evidence=IEA;ISO;ISS

GO:0005886 "plasma membrane" evidence=IEA;ISO;IDA

GO:0005887 "integral to plasma membrane" evidence=ISO;ISS

GO:0006659 "phosphatidylserine biosynthetic process" evidence=IEA;ISO

GO:0006915 "apoptotic process" evidence=ISO;ISS

GO:0006953 "acute-phase response" evidence=IEA

GO:0006955 "immune response" evidence=IMP

GO:0010225 "response to UV-C" evidence=IEA;ISO

GO:0010628 "positive regulation of gene expression" evidence=ISO

GO:0015914 "phospholipid transport" evidence=TAS

GO:0017121 "phospholipid scrambling" evidence=IEA;ISO;IMP

GO:0017124 "SH3 domain binding" evidence=ISO;ISS

GO:0017128 "phospholipid scramblase activity" evidence=ISO;ISS

GO:0019899 "enzyme binding" evidence=ISO;IPI

GO:0030099 "myeloid cell differentiation" evidence=IEA;ISO

GO:0031012 "extracellular matrix" evidence=ISO;ISS

GO:0032091 "negative regulation of protein binding" evidence=IEA;ISO

GO:0033003 "regulation of mast cell activation" evidence=IMP

GO:0035455 "response to interferon-alpha" evidence=IEA;ISO

GO:0035456 "response to interferon-beta" evidence=ISO

GO:0042609 "CD4 receptor binding" evidence=ISO;ISS

GO:0043065 "positive regulation of apoptotic process" evidence=IEA;ISO

GO:0045071 "negative regulation of viral genome replication" evidence=IEA;ISO;ISS

GO:0045089 "positive regulation of innate immune response" evidence=IEA;ISO;ISS

GO:0045121 "membrane raft" evidence=ISO;IDA

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=ISO;ISS

GO:0051607 "defense response to virus" evidence=IEA;ISO;ISS

GO:0060368 "regulation of Fc receptor mediated stimulatory signaling pathway" evidence=IMP

GO:0071222 "cellular response to lipopolysaccharide" evidence=IEA

GO:0071345 "cellular response to cytokine stimulus" evidence=IEA

GO:0097193 "intrinsic apoptotic signaling pathway" evidence=IEA;ISO

GO:2000373 "positive regulation of DNA topoisomerase (ATP-hydrolyzing) activity" evidence=ISO;ISS

UNIPROTKB|Q3ZBG9 PLSCR2 "Phospholipid scramblase 2" [Bos taurus (taxid:9913)]

 Score = 718 (257.8 bits), Expect = 6.1e-71, P = 6.1e-71
 Identities = 130/224 (58%), Positives = 161/224 (71%)

Query:    38 WMNIPQGRPANCPPGLEYLTTVDQLMVKQKVELLEALIGWETNNKFTVKNAQGQKVFLAV 97
             WM  P   P NCPPGLEYLT +DQL++ Q++ELLE LIG+ETNNK+ +KN+ GQ+++ A 
Sbjct:    67 WMPAPLP-PLNCPPGLEYLTQIDQLLIHQQIELLEVLIGFETNNKYEIKNSLGQRIYFAA 125

Query:    98 EINDCCTRNCCGPLRPFEMKVLDNYKNEVIHFERPLACDSCWFPCCLQSLNVFSPPGALI 157
             E  DCCTRNCCGP RPF M++LDN   EVI  ERPL C SC FPCCLQ + + +PPG  +
Sbjct:   126 EDTDCCTRNCCGPSRPFTMRILDNMGREVITLERPLRCTSCCFPCCLQEIEIQAPPGVPV 185

Query:   158 GSIEQEWSLLTPIFVIKNGAGDIVLRIEGPICRYSMCGGDVDFKILSRDGQTEVGRISKQ 217
             G + Q W    P F I+N   + VLRI GP C    C  D+DF++ S D +  VG+ISK 
Sbjct:   186 GYVTQTWHPCLPKFTIQNERREDVLRISGP-CVICSCCADIDFEVKSLDDKYVVGKISKH 244

Query:   218 WSGLLREAFTDADYFGISFPGDLDVRMKAVMLGACFLIDAMFYE 261
             W+GL++E FTD D FGI FP DLDV+MKAVMLGACFLID MF+E
Sbjct:   245 WTGLIKELFTDVDNFGIQFPLDLDVKMKAVMLGACFLIDFMFFE 288

GO:0046872 "metal ion binding" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

FB|FBgn0035390 scramb2 "scramblase 2" [Drosophila melanogaster (taxid:7227)]

 Score = 699 (251.1 bits), Expect = 6.3e-69, P = 6.3e-69
 Identities = 133/231 (57%), Positives = 170/231 (73%)

Query:    35 NG--GWMNIPQGRPANCPPGLEYLTTVDQLMVKQKVELLEALIGWETNNKFTVKNAQGQK 92
             NG   WM+IP G P NCP GLEYLT +DQL+V QK+E LE L G+ET N+F VKN+ GQ 
Sbjct:    36 NGPENWMSIPVGMP-NCPQGLEYLTALDQLLVSQKIEKLELLTGFETKNRFKVKNSLGQN 94

Query:    93 VFLAVEINDCCTRNCCGPLRPFEMKVLDNYKNEVIHFERPLACDS-CWFPCCLQSLNVFS 151
             V+ A E +DCCTRN  G  RPFEMK+LDN++NEV+H  RP  CD  C FP C+ ++ V +
Sbjct:    95 VYFAYEESDCCTRNMLGRSRPFEMKILDNFQNEVLHLYRPFKCDILCCFPSCMNAVEVSA 154

Query:   152 PPGALIGSIEQEWSLLTPIFVIKNGAGDIVLRIEGPICRYSMCGGDVDFKILSRDGQTEV 211
             PPG +IGS+EQ  + + P F IKN  GD VL+IEGP+C    C  D +FK+LS + + E+
Sbjct:   155 PPGQVIGSVEQVCTFMRPKFNIKNTCGDTVLQIEGPVCPCK-CFSDTNFKVLSANNE-EI 212

Query:   212 GRISKQWSGLLREAFTDADYFGISFPGDLDVRMKAVMLGACFLIDAMFYEK 262
             G+ISKQWSGL RE FTDADYF ++FP +LDVRMKA++  A FLIDA++YE+
Sbjct:   213 GKISKQWSGLGRELFTDADYFSVTFPLNLDVRMKALIFAALFLIDAVYYEQ 263

GO:0017121 "phospholipid scrambling" evidence=ISS

GO:0017128 "phospholipid scramblase activity" evidence=ISS

GO:0007268 "synaptic transmission" evidence=IMP

ZFIN|ZDB-GENE-040426-2517 plscr3b "phospholipid scramblase 3b" [Danio rerio (taxid:7955)]

 Score = 695 (249.7 bits), Expect = 1.7e-68, P = 1.7e-68
 Identities = 126/225 (56%), Positives = 162/225 (72%)

Query:    42 PQGRPANCPPGLEYLTTVDQLMVKQKVELLEALIGWETNNKFTVKNAQGQKVFLAVEIND 101
             P   PA  PPGLEYLT +DQ+++ QKVELLEA IG+ETNN++ +KN+ GQK++ A E ND
Sbjct:    82 PIAVPAGVPPGLEYLTQIDQILIHQKVELLEAFIGFETNNQYEIKNSLGQKIYSAKEKND 141

Query:   102 CCTRNCCGPLRPFEMKVLDNYKNEVIHFERPLACDSCWFPCCLQSLNVFSPPGALIGSIE 161
             CCTRNCCG LR F+MK+ DN   EVI   RP  C SCW PCCLQ + + +PPG  IG ++
Sbjct:   142 CCTRNCCGALRSFDMKIKDNMDREVIRLIRPYRCVSCWCPCCLQEMEIQAPPGTPIGYVK 201

Query:   162 QEWSLLTPIFVIKNGAGDIVLRIEGPICRYSMCGGDVDFKILSRDGQTE-VGRISKQWSG 220
             Q+W    P F I     + V+++EGP C    C GDV F++  +DG  + +GRISKQW+G
Sbjct:   202 QDWHPCYPKFSIMGPNKETVMKLEGP-CMACNCCGDVHFELKGKDGTGKPIGRISKQWTG 260

Query:   221 LLREAFTDADYFGISFPGDLDVRMKAVMLGACFLIDAMFYEKAGN 265
             LL+E FTDAD FGI FP D+DV+MKAV++G CFLID MF+EK G+
Sbjct:   261 LLKEVFTDADNFGIQFPLDMDVKMKAVLMGTCFLIDFMFFEKVGD 305

GO:0008150 "biological_process" evidence=ND

GO:0005575 "cellular_component" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9JJ00	PLS1_MOUSE	No assigned EC number	0.5714	0.7883	0.6585	yes	N/A
O15162	PLS1_HUMAN	No assigned EC number	0.5826	0.8321	0.7169	yes	N/A
Q3ZBG9	PLS2_BOVIN	No assigned EC number	0.5803	0.8102	0.7576	yes	N/A
P58195	PLS1_RAT	No assigned EC number	0.5714	0.7883	0.6447	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	274
pfam03803	223	pfam03803, Scramblase, Scramblase	1e-100

>gnl|CDD|217740 pfam03803, Scramblase, Scramblase

 Score =  291 bits (747), Expect = e-100
 Identities = 109/224 (48%), Positives = 150/224 (66%), Gaps = 1/224 (0%)

Query: 39  MNIPQGRPANCPPGLEYLTTVDQLMVKQKVELLEALIGWETNNKFTVKNAQGQKVFLAVE 98
           M+ P   PANCP GLEYL  +D ++V Q++E LE   G+ET N++ +KN  GQ ++ A+E
Sbjct: 1   MSGPGQPPANCPAGLEYLLQLDTILVHQQIEPLEIFTGFETKNRYVIKNVNGQPLYYAME 60

Query: 99  INDCCTRNCCGPLRPFEMKVLDNYKNEVIHFERPLACDSCWFPCCLQSLNVFSPPGALIG 158
            ++CC R CCG  RPF M++ DN+ NEV+  +RP  C SC  P CLQ   + +PPG  IG
Sbjct: 61  RSNCCARQCCGTHRPFVMRITDNFGNEVLTLKRPFRCCSCCCPSCLQEQEIQAPPGTTIG 120

Query: 159 SIEQEWSLLTPIFVIKNGAGDIVLRIEGPICRYSMCGGDVDFKILSRDGQTEVGRISKQW 218
            + Q W L  P + +++  G+ VL I GP C+ S CGGD DF + + DG   VG IS++W
Sbjct: 121 EVLQTWHLWRPNYELQDADGNQVLLIFGPCCKCS-CGGDWDFPVKTADGSEVVGSISRKW 179

Query: 219 SGLLREAFTDADYFGISFPGDLDVRMKAVMLGACFLIDAMFYEK 262
            GL REAFTDAD + + FP DLDV++KAV+LGA FLID  ++E+
Sbjct: 180 GGLGREAFTDADTYVVRFPLDLDVKLKAVLLGAAFLIDFDYFER 223

Scramblase is palmitoylated and contains a potential protein kinase C phosphorylation site. Scramblase exhibits Ca2+-activated phospholipid scrambling activity in vitro. There are also possible SH3 and WW binding motifs. Scramblase is involved in the redistribution of phospholipids after cell activation or injury. Length = 223

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	274
PF03803	221	Scramblase: Scramblase ; InterPro: IPR005552 Scram	100.0
KOG0621|consensus	292		100.0
COG4894	159	Uncharacterized conserved protein [Function unknow	99.88
PF04525	187	Tub_2: Tubby C 2; InterPro: IPR007612 This is a fa	99.72
PF03803	221	Scramblase: Scramblase ; InterPro: IPR005552 Scram	97.87
COG4894	159	Uncharacterized conserved protein [Function unknow	97.21
PF04525	187	Tub_2: Tubby C 2; InterPro: IPR007612 This is a fa	96.82
KOG0621|consensus	292		92.67

>PF03803 Scramblase: Scramblase ; InterPro: IPR005552 Scramblase is palmitoylated and contains a potential protein kinase C phosphorylation site

Probab=100.00  E-value=5.4e-68  Score=467.17  Aligned_cols=221  Identities=53%  Similarity=1.003  Sum_probs=214.0

Q ss_pred             cccCCCCCCCCCCccccccCCCeEEEEEeeehhhhhhCcccCceEEEEcCCCCEEEEEEeecCeeeecccCCCCCeEEEE
Q psy11930         39 MNIPQGRPANCPPGLEYLTTVDQLMVKQKVELLEALIGWETNNKFTVKNAQGQKVFLAVEINDCCTRNCCGPLRPFEMKV  118 (274)
Q Consensus        39 m~~P~~~~~~~p~gLe~L~~l~~l~IkQ~~e~~E~~~g~e~~N~Y~I~d~~Gq~v~~~~E~s~~~~R~~~~~~R~f~l~v  118 (274)
                      ||.|..++++||+|||+|+++++|+|+|+++++|+++|++++|+|.|+|++||+||+++|+++++.|+||+++|+|+|+|
T Consensus         1 ~~~~~~~~~~~p~gLe~L~~~~~l~I~Q~~e~~e~~~~~e~~N~Y~I~n~~g~~i~~~~E~s~~~~R~~~~~~R~f~~~i   80 (221)
T PF03803_consen    1 MPGPLATPPNCPPGLEYLAGLDQLLIKQQIEPLEIFTGFETPNRYDIKNPNGQQIYYAVEESDCCSRQCCGSHRPFKMHI   80 (221)
T ss_pred             CCCCCCCCCCCChHHHHHhCCCEEEEEEEEEEeceecccccCceEEEECCCCCEEEEEEEeCcceeeeecCCCCCEEEEE
Confidence            78886555599999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EeCCCCeEEEEEeecccccCCCCCcccEEEEEcCCCCEEEEEEeecccccceEEEEcCCCCEEEEEEcCceeeccCCCce
Q psy11930        119 LDNYKNEVIHFERPLACDSCWFPCCLQSLNVFSPPGALIGSIEQEWSLLTPIFVIKNGAGDIVLRIEGPICRYSMCGGDV  198 (274)
Q Consensus       119 ~D~~g~~vl~i~Rp~~c~~cc~~cc~~~~~V~~p~G~~iG~I~q~~~~~~~~f~I~d~~g~~~~~I~Gp~~~~~~cc~~~  198 (274)
                      +|+.|++|++++||++|.. ||+||.++++|++|+|++||+|+|+|++|+++|+|+|++|+.+++|+||+|.|+ ||.++
T Consensus        81 ~D~~g~~vl~i~Rp~~c~~-C~~~~~~~~~V~~p~g~~iG~I~q~~~~~~~~f~I~d~~~~~~~~I~gp~~~~~-~~~~~  158 (221)
T PF03803_consen   81 YDNYGREVLTIERPFKCCS-CCPCCLQEMEVESPPGNLIGSIRQPFSCCRPNFDIFDANGNPIFTIKGPCCCCS-CCCDW  158 (221)
T ss_pred             EecCCCEEEEEEcCCccee-cccccceeEEEecCCCcEEEEEEEcCcccceEEEEEECCCceEEEEeCCcceec-cccce
Confidence            9999999999999999987 588999999999999999999999999999999999999999999999999988 99999


Q ss_pred             EEEEEEcCCCeEEEEEEeeccccccccccCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHhhhc
Q psy11930        199 DFKILSRDGQTEVGRISKQWSGLLREAFTDADYFGISFPGDLDVRMKAVMLGACFLIDAMFYEK  262 (274)
Q Consensus       199 ~F~I~~~~g~~~VG~I~Kkw~G~~~e~ft~~D~y~I~Fp~dld~~~KallLaa~ilID~~~fe~  262 (274)
                      +|+|+|++|+ .||+|+|+|+|+.+|+||++|+|.|+||+++|+++|||||||+|+|||+|||+
T Consensus       159 ~F~I~~~~~~-~vg~I~k~w~G~~~e~~t~~d~f~i~Fp~~l~~~~Kalll~a~~liD~~~Fe~  221 (221)
T PF03803_consen  159 EFEIKDPNGQ-EVGSITKKWSGFCRELFTDADNFVIEFPPDLDVEQKALLLGAAFLIDYMYFER  221 (221)
T ss_pred             eeeeecccCc-EEEEEEEecCCcchhhccccceEEEEcCCCCCHHHHHHHHHHHHHhhhhhhcC
Confidence            9999999995 99999999999999999999999999999999999999999999999999996

Scramblase exhibits Ca2+-activated phospholipid scrambling activity in vitro. There are also possible SH3 and WW binding motifs. Scramblase is involved in the redistribution of phospholipids after cell activation or injury [].

>KOG0621|consensus

Probab=100.00  E-value=4.9e-59  Score=421.18  Aligned_cols=247  Identities=38%  Similarity=0.672  Sum_probs=230.7

Q ss_pred             hcccccccccCCCccccCCCCCCC---CCCccccccCCCeEEEEEeeehhhhhhCcccCceEEEEcCCCCEEEEEEeecC
Q psy11930         25 RKAIKSTLWKNGGWMNIPQGRPAN---CPPGLEYLTTVDQLMVKQKVELLEALIGWETNNKFTVKNAQGQKVFLAVEIND  101 (274)
Q Consensus        25 ~~~~~~~~~~~~~wm~~P~~~~~~---~p~gLe~L~~l~~l~IkQ~~e~~E~~~g~e~~N~Y~I~d~~Gq~v~~~~E~s~  101 (274)
                      ..+..+++-+..+||+.|++.. +   +|+||++|+.+|+++|.|++|++|+++|||++|||.|+|.+|+++|++.|+|+
T Consensus        41 ~p~~~~~p~~v~~~~~a~p~~~-~~~~~~~~l~~L~~~~~~~V~q~~E~~ei~tG~et~NRY~v~~~~g~~v~~~~E~S~  119 (292)
T KOG0621|consen   41 LPQARDTPMVVPNQVAAMPVQM-TQLAPPNGLEYLAHLDSLMVVQQIEPLEIFTGFETANRYVVHDMYGQPLYYAMERSN  119 (292)
T ss_pred             CCCCccCCCCCccccccCCCCC-CCcCCCChhheeecCCceEEEEeeeehhhhccCccCcEEEEEcCCcChhHHHHhhch
Confidence            3455556666677999998877 6   99999999999999999999999999999999999999999999999999999


Q ss_pred             eeeecccCCCCCeEEEEEeCCCCeEEEEEeecccccC-CCCCcccEEEEEcCCCCEEEEEEeecccccceEEEEcCCCCE
Q psy11930        102 CCTRNCCGPLRPFEMKVLDNYKNEVIHFERPLACDSC-WFPCCLQSLNVFSPPGALIGSIEQEWSLLTPIFVIKNGAGDI  180 (274)
Q Consensus       102 ~~~R~~~~~~R~f~l~v~D~~g~~vl~i~Rp~~c~~c-c~~cc~~~~~V~~p~G~~iG~I~q~~~~~~~~f~I~d~~g~~  180 (274)
                      .+.|+++|.+|||.++|.|+.|++|++++||+.|.+| |++||.++++|+.|++.++|+|.|.|+++.++|+|.|..++.
T Consensus       120 ~~~Rq~~g~~RpF~~~i~D~~g~eVl~~~R~~~c~~~~c~~~~~~~~~v~~p~~~~lG~v~q~~~~~~~~f~i~~~~~~~  199 (292)
T KOG0621|consen  120 VFARQYLGTHRPFAMRIMDNFGQEVLTCKRPFPCCSSACALCLAQEIEIQSPPMGLLGKVLQTWGCVNPNFHLWDRDGNL  199 (292)
T ss_pred             HHHHHhhccCCcceeEeecccCcEEEEEeccccccccccccccccEEEEEcCCCceEEEEEEeeccccceEEEEccccee
Confidence            9999999999999999999999999999999999875 789999999999999999999999999999999999999999


Q ss_pred             EEEEEcC-ceeeccCCCceEEEEEEcCCCeEEEEEEeeccccccccccCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHh
Q psy11930        181 VLRIEGP-ICRYSMCGGDVDFKILSRDGQTEVGRISKQWSGLLREAFTDADYFGISFPGDLDVRMKAVMLGACFLIDAMF  259 (274)
Q Consensus       181 ~~~I~Gp-~~~~~~cc~~~~F~I~~~~g~~~VG~I~Kkw~G~~~e~ft~~D~y~I~Fp~dld~~~KallLaa~ilID~~~  259 (274)
                      ++.|+|| +|.|. ||.+..|.|+..+++..||+|+|+|+|+.+|+|||+|+|.|+||.|||+++||+|||++|+|||++
T Consensus       200 v~~v~gp~~~~~~-~~~d~~f~~~~~d~~~~vg~I~k~w~g~~rE~fTDad~f~v~FPldLdvk~kavllga~flID~~~  278 (292)
T KOG0621|consen  200 VFLVEGPRCCTFA-CCDDTVFFPKTTDNGRIVGSISRKWAGLVREAFTDADTFVVHFPLDLDVKLKALLLGSTFLIDYMS  278 (292)
T ss_pred             EEEEEcCceeEEE-eecCcceeEEEcCCCeEEEEEeecccchhhhheeccceeeEecCCcCCHHHHhhhhhheeeEEEEE
Confidence            9999999 77777 888899999888887789999999999999999999999999999999999999999999999999


Q ss_pred             hhccCCCCCCCCCC
Q psy11930        260 YEKAGNRESDGIGM  273 (274)
Q Consensus       260 fe~~~~~~~~~~~~  273 (274)
                      ||++...++-.+|+
T Consensus       279 Fe~~~~~~~~~~~~  292 (292)
T KOG0621|consen  279 FESRGIPSNMDIGG  292 (292)
T ss_pred             EecCCCCCccccCC
Confidence            99998776666654

>COG4894 Uncharacterized conserved protein [Function unknown]

Probab=99.88  E-value=3.6e-22  Score=161.25  Aligned_cols=153  Identities=19%  Similarity=0.345  Sum_probs=130.0

Q ss_pred             CeEEEEEeeehhhhhhCcccCceEEEEcCCCCEEEEEEeecCeeeecccCCCCCeEEEEEeCCCCeEEEEEeecccccCC
Q psy11930         60 DQLMVKQKVELLEALIGWETNNKFTVKNAQGQKVFLAVEINDCCTRNCCGPLRPFEMKVLDNYKNEVIHFERPLACDSCW  139 (274)
Q Consensus        60 ~~l~IkQ~~e~~E~~~g~e~~N~Y~I~d~~Gq~v~~~~E~s~~~~R~~~~~~R~f~l~v~D~~g~~vl~i~Rp~~c~~cc  139 (274)
                      +++.|||+..        ...|.|.|+|++||.+|++.+.  ++.   .    +-++.++|+.|++|+.++.|...-   
T Consensus         6 ~tl~mkQk~~--------~~gd~f~I~d~dgE~af~VeGs--~f~---i----~dtlti~Da~G~~l~~i~~kll~l---   65 (159)
T COG4894           6 ITLFMKQKMF--------SFGDAFHIYDRDGEEAFKVEGS--FFS---I----GDTLTITDASGKTLVSIEQKLLSL---   65 (159)
T ss_pred             HhHhhhhhhh--------hcccceEEECCCCcEEEEEeee--EEe---e----CceEEEEecCCCChHHHHHHHhhc---
Confidence            5677888886        4689999999999999999754  221   1    225788999999999999996643   


Q ss_pred             CCCcccEEEEEcCCCCEEEEEEeecccccceEEEEcCCCCEEEEEEcCceeeccCCCceEEEEEEcCCCeEEEEEEeecc
Q psy11930        140 FPCCLQSLNVFSPPGALIGSIEQEWSLLTPIFVIKNGAGDIVLRIEGPICRYSMCGGDVDFKILSRDGQTEVGRISKQWS  219 (274)
Q Consensus       140 ~~cc~~~~~V~~p~G~~iG~I~q~~~~~~~~f~I~d~~g~~~~~I~Gp~~~~~~cc~~~~F~I~~~~g~~~VG~I~Kkw~  219 (274)
                          +|+++|++++|+ +..|++++++++++|+| |..+   +.|.|+.|       +.+|++.+.+  ..+++|+||| 
T Consensus        66 ----~~~yeI~d~~g~-~~~vrKK~tf~Rdk~e~-d~~~---~eihGNi~-------d~efkl~dg~--~~~aeVsKkw-  126 (159)
T COG4894          66 ----LPRYEISDGGGT-VCEVRKKVTFSRDKFEI-DGLN---WEIHGNIW-------DDEFKLTDGE--NVRAEVSKKW-  126 (159)
T ss_pred             ----cceeEEEcCCCC-EEEEEEEEEEEeeeEEE-cCCC---eEEeccee-------ceEEEEecCC--ceehhheeee-
Confidence                899999999888 77888899999999999 4434   99999999       9999999743  3899999999 


Q ss_pred             ccccccccCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHhh
Q psy11930        220 GLLREAFTDADYFGISFPGDLDVRMKAVMLGACFLIDAMFY  260 (274)
Q Consensus       220 G~~~e~ft~~D~y~I~Fp~dld~~~KallLaa~ilID~~~f  260 (274)
                            |..+|+|.++|.++   +.++|+||.+++||++.+
T Consensus       127 ------f~~rdTY~l~vapd---e~a~lii~i~VaLD~v~~  158 (159)
T COG4894         127 ------FSWRDTYHLQVAPD---EDALLIIAIAVALDMVLY  158 (159)
T ss_pred             ------EeccceEEEEEcCc---hhhHHHHHHHHHHHHHhc
Confidence                  99999999999775   667999999999999865

>PF04525 Tub_2: Tubby C 2; InterPro: IPR007612 This is a family of plant and bacterial uncharacterised proteins

Probab=99.72  E-value=2.3e-16  Score=135.69  Aligned_cols=164  Identities=20%  Similarity=0.298  Sum_probs=86.5

Q ss_pred             ccccCCC-eEEEEEeeehhhhhhCcccCceEEEEcCCCCEEEEEEeecCeeeecccCCCCCeEEEEEeCCCCeEEEEEee
Q psy11930         54 EYLTTVD-QLMVKQKVELLEALIGWETNNKFTVKNAQGQKVFLAVEINDCCTRNCCGPLRPFEMKVLDNYKNEVIHFERP  132 (274)
Q Consensus        54 e~L~~l~-~l~IkQ~~e~~E~~~g~e~~N~Y~I~d~~Gq~v~~~~E~s~~~~R~~~~~~R~f~l~v~D~~g~~vl~i~Rp  132 (274)
                      ++.+.-. .+.|+++...+       ..+.|.|+|++|+.+|.+.. ...     +..  +-++.++|++|++|++|+|+
T Consensus         7 ~~~~~~~~~l~v~~k~~~~-------~~~~f~V~D~~G~~vf~V~g-~~~-----~s~--~~~~~l~D~~G~~L~~i~~k   71 (187)
T PF04525_consen    7 QYCSPQPVTLTVKKKSLSF-------SGDDFTVYDENGNVVFRVDG-GKF-----FSI--GKKRTLMDASGNPLFTIRRK   71 (187)
T ss_dssp             GGB-SS-EEEEEE-----------------EEEEETTS-EEEEEE---SC-----TTB--TTEEEEE-TTS-EEEEEE--
T ss_pred             HHcCCCceEEEEEEEEeee-------cCCCEEEEcCCCCEEEEEEE-ecc-----cCC--CCEEEEECCCCCEEEEEEee
Confidence            4444443 44586666432       47999999999999999988 111     111  22789999999999999996


Q ss_pred             -cccccCCCCCcccEEEEEcCCCC----EEEEEEeeccc-ccceEEEEcC---------CCCEEEEEEcCceeeccCCCc
Q psy11930        133 -LACDSCWFPCCLQSLNVFSPPGA----LIGSIEQEWSL-LTPIFVIKNG---------AGDIVLRIEGPICRYSMCGGD  197 (274)
Q Consensus       133 -~~c~~cc~~cc~~~~~V~~p~G~----~iG~I~q~~~~-~~~~f~I~d~---------~g~~~~~I~Gp~~~~~~cc~~  197 (274)
                       +..        +++.+|+.+++.    ++++|++.+.+ .++.+.++..         .+.+-+.|+|+++       +
T Consensus        72 ~~~l--------~~~w~i~~~~~~~~~~~i~tvkk~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~i~G~~~-------~  136 (187)
T PF04525_consen   72 LFSL--------RPTWEIYRGGGSEGKKPIFTVKKKSMLQNKDSFDVFLPPKSNISIDDSEGPDFEIKGNFW-------D  136 (187)
T ss_dssp             --------------EEEEEETT---GGGEEEEEE----------EEEEET--T----------SEEEES-TT-------T
T ss_pred             eccc--------ceEEEEEECCCCccCceEEEEEEecccCCCcceeEEEecccceeecCCCCceEEEEEEec-------C
Confidence             443        799999998776    59999998222 2333444432         3445699999988       8


Q ss_pred             eEEEEEEcCCCeEEEEEEeeccccccccccCCceEEEEeCCCCCHHHHHHHHHHHH
Q psy11930        198 VDFKILSRDGQTEVGRISKQWSGLLREAFTDADYFGISFPGDLDVRMKAVMLGACF  253 (274)
Q Consensus       198 ~~F~I~~~~g~~~VG~I~Kkw~G~~~e~ft~~D~y~I~Fp~dld~~~KallLaa~i  253 (274)
                      ++|.|++.+|+ .||+|++++.  .++++...|+|.|++.|+.|.   |+++|.++
T Consensus       137 ~~~~I~~~~g~-~VA~i~rk~~--~k~~~~~~dty~l~V~pg~D~---~lv~alvv  186 (187)
T PF04525_consen  137 RSFTIYDSGGR-VVAEISRKYS--SKKWFSGRDTYTLTVAPGVDQ---ALVVALVV  186 (187)
T ss_dssp             T--EEEECC---EEEEEEE------------B-SEEEEE-TTSBH---HHHHHHHH
T ss_pred             cEEEEEEcCCC-EEEEEecccc--eeeEEecCcEEEEEEcCCCCH---HHheeEEe
Confidence            99999986664 9999998887  677899999999999998776   77777765

; PDB: 1ZXU_A 2Q4M_A.

>PF03803 Scramblase: Scramblase ; InterPro: IPR005552 Scramblase is palmitoylated and contains a potential protein kinase C phosphorylation site

Probab=97.87  E-value=0.00041  Score=60.92  Aligned_cols=100  Identities=13%  Similarity=0.249  Sum_probs=79.3

Q ss_pred             CeEEEEEeCCCCeEEEEEeecccc-cCCC-CCcccEEEEEcCCCCEEEEEEeeccccc------ceEEEEcCCCCEEEEE
Q psy11930        113 PFEMKVLDNYKNEVIHFERPLACD-SCWF-PCCLQSLNVFSPPGALIGSIEQEWSLLT------PIFVIKNGAGDIVLRI  184 (274)
Q Consensus       113 ~f~l~v~D~~g~~vl~i~Rp~~c~-~cc~-~cc~~~~~V~~p~G~~iG~I~q~~~~~~------~~f~I~d~~g~~~~~I  184 (274)
                      +-+..|.|.+|++|+.....-.|. ..|| +...-+|.|.++.|+.+-++++++.++.      .+.+|.++.|+.+.+|
T Consensus        42 ~N~Y~I~n~~g~~i~~~~E~s~~~~R~~~~~~R~f~~~i~D~~g~~vl~i~Rp~~c~~C~~~~~~~~~V~~p~g~~iG~I  121 (221)
T PF03803_consen   42 PNRYDIKNPNGQQIYYAVEESDCCSRQCCGSHRPFKMHIYDNYGREVLTIERPFKCCSCCPCCLQEMEVESPPGNLIGSI  121 (221)
T ss_pred             CceEEEECCCCCEEEEEEEeCcceeeeecCCCCCEEEEEEecCCCEEEEEEcCCcceecccccceeEEEecCCCcEEEEE
Confidence            346788999999999887765443 2344 3345678999999999999999888754      6788999999999999


Q ss_pred             EcCceeeccCCCceEEEEEEcCCCeEEEEEEeec
Q psy11930        185 EGPICRYSMCGGDVDFKILSRDGQTEVGRISKQW  218 (274)
Q Consensus       185 ~Gp~~~~~~cc~~~~F~I~~~~g~~~VG~I~Kkw  218 (274)
                      +-++.    || ...|.|.|.+|+ .+..|.-.+
T Consensus       122 ~q~~~----~~-~~~f~I~d~~~~-~~~~I~gp~  149 (221)
T PF03803_consen  122 RQPFS----CC-RPNFDIFDANGN-PIFTIKGPC  149 (221)
T ss_pred             EEcCc----cc-ceEEEEEECCCc-eEEEEeCCc
Confidence            98775    33 688999999996 899997654

Scramblase exhibits Ca2+-activated phospholipid scrambling activity in vitro. There are also possible SH3 and WW binding motifs. Scramblase is involved in the redistribution of phospholipids after cell activation or injury [].

>COG4894 Uncharacterized conserved protein [Function unknown]

Probab=97.21  E-value=0.00026  Score=58.05  Aligned_cols=77  Identities=18%  Similarity=0.326  Sum_probs=48.3

Q ss_pred             ccEEEEEcCCCCEEEEEEeecccccceEEEEcCCCCEEEEEEcCceeeccCCCceEEEEEEcCCCeEEEEEEeecccccc
Q psy11930        144 LQSLNVFSPPGALIGSIEQEWSLLTPIFVIKNGAGDIVLRIEGPICRYSMCGGDVDFKILSRDGQTEVGRISKQWSGLLR  223 (274)
Q Consensus       144 ~~~~~V~~p~G~~iG~I~q~~~~~~~~f~I~d~~g~~~~~I~Gp~~~~~~cc~~~~F~I~~~~g~~~VG~I~Kkw~G~~~  223 (274)
                      -..+.|++++|+..=+|.-++--.+-+|.|.|+.|.+++.|+-+...-     --.|+|.+.+|.  +..|+||..    
T Consensus        18 gd~f~I~d~dgE~af~VeGs~f~i~dtlti~Da~G~~l~~i~~kll~l-----~~~yeI~d~~g~--~~~vrKK~t----   86 (159)
T COG4894          18 GDAFHIYDRDGEEAFKVEGSFFSIGDTLTITDASGKTLVSIEQKLLSL-----LPRYEISDGGGT--VCEVRKKVT----   86 (159)
T ss_pred             ccceEEECCCCcEEEEEeeeEEeeCceEEEEecCCCChHHHHHHHhhc-----cceeEEEcCCCC--EEEEEEEEE----
Confidence            355666776776666666544444555777777777777776665522     356778777663  777777762    


Q ss_pred             ccccCCceEEE
Q psy11930        224 EAFTDADYFGI  234 (274)
Q Consensus       224 e~ft~~D~y~I  234 (274)
                        |+ .|.|.+
T Consensus        87 --f~-Rdk~e~   94 (159)
T COG4894          87 --FS-RDKFEI   94 (159)
T ss_pred             --EE-eeeEEE
Confidence              44 666665

>PF04525 Tub_2: Tubby C 2; InterPro: IPR007612 This is a family of plant and bacterial uncharacterised proteins

Probab=96.82  E-value=0.0041  Score=53.31  Aligned_cols=84  Identities=10%  Similarity=0.209  Sum_probs=50.0

Q ss_pred             CCeEEEEEee-cccccCCCCCcccEEEEEcCCCCEEEEEEe-ecccccceEEEEcCCCCEEEEEEcCceeeccCCCceEE
Q psy11930        123 KNEVIHFERP-LACDSCWFPCCLQSLNVFSPPGALIGSIEQ-EWSLLTPIFVIKNGAGDIVLRIEGPICRYSMCGGDVDF  200 (274)
Q Consensus       123 g~~vl~i~Rp-~~c~~cc~~cc~~~~~V~~p~G~~iG~I~q-~~~~~~~~f~I~d~~g~~~~~I~Gp~~~~~~cc~~~~F  200 (274)
                      ..+.|++.+. ....       ...+.|++.+|+++-+|.. ++..++.+..|+|++|+++++|+-....     -...|
T Consensus        12 ~~~~l~v~~k~~~~~-------~~~f~V~D~~G~~vf~V~g~~~~s~~~~~~l~D~~G~~L~~i~~k~~~-----l~~~w   79 (187)
T PF04525_consen   12 QPVTLTVKKKSLSFS-------GDDFTVYDENGNVVFRVDGGKFFSIGKKRTLMDASGNPLFTIRRKLFS-----LRPTW   79 (187)
T ss_dssp             S-EEEEEE-----------------EEEEETTS-EEEEEE--SCTTBTTEEEEE-TTS-EEEEEE-------------EE
T ss_pred             CceEEEEEEEEeeec-------CCCEEEEcCCCCEEEEEEEecccCCCCEEEEECCCCCEEEEEEeeecc-----cceEE
Confidence            4466788554 3322       5788999999999999999 7888999999999999999999985441     14689


Q ss_pred             EEEEcCCC---eEEEEEEeec
Q psy11930        201 KILSRDGQ---TEVGRISKQW  218 (274)
Q Consensus       201 ~I~~~~g~---~~VG~I~Kkw  218 (274)
                      +|+..++.   ..+++|+|++
T Consensus        80 ~i~~~~~~~~~~~i~tvkk~~  100 (187)
T PF04525_consen   80 EIYRGGGSEGKKPIFTVKKKS  100 (187)
T ss_dssp             EEEETT---GGGEEEEEE---
T ss_pred             EEEECCCCccCceEEEEEEec
Confidence            99988774   1499999994

; PDB: 1ZXU_A 2Q4M_A.

>KOG0621|consensus

Probab=92.67  E-value=1.7  Score=40.16  Aligned_cols=56  Identities=21%  Similarity=0.293  Sum_probs=37.9

Q ss_pred             EEEEEeCCCCeEEEEEeecccccCCCCCcccEEEEEcCCCCEEEEEEeecccccceE
Q psy11930        115 EMKVLDNYKNEVIHFERPLACDSCWFPCCLQSLNVFSPPGALIGSIEQEWSLLTPIF  171 (274)
Q Consensus       115 ~l~v~D~~g~~vl~i~Rp~~c~~cc~~cc~~~~~V~~p~G~~iG~I~q~~~~~~~~f  171 (274)
                      +.+|.|..++.++.++.|--|.+|||.- .....+...+|..+|+|.++|..+....
T Consensus       189 ~f~i~~~~~~~v~~v~gp~~~~~~~~~d-~~f~~~~~d~~~~vg~I~k~w~g~~rE~  244 (292)
T KOG0621|consen  189 NFHLWDRDGNLVFLVEGPRCCTFACCDD-TVFFPKTTDNGRIVGSISRKWAGLVREA  244 (292)
T ss_pred             eEEEEcccceeEEEEEcCceeEEEeecC-cceeEEEcCCCeEEEEEeecccchhhhh
Confidence            5677787788888888885555445431 1223445557888999999998776543

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	274
1zxu_A	217	AT5G01750 protein; PFAM PF01167, TULP, structural	2e-05

>1zxu_A AT5G01750 protein; PFAM PF01167, TULP, structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 1.70A {Arabidopsis thaliana} SCOP: d.23.1.2 PDB: 2q4m_A Length = 217

 Score = 43.9 bits (103), Expect = 2e-05
 Identities = 24/205 (11%), Positives = 62/205 (30%), Gaps = 30/205 (14%)

Query: 62  LMVKQKVELLEALIGWETNNKFTVKNAQGQKVFLAVEINDCCTRNCCGPLRPFEMKVLDN 121
           + + +K+  L       T+  F + +  G  +F  V+       +        +  +LD 
Sbjct: 40  MAIVRKMMSL-------TDGNFVITDVNGNLLFK-VKEPVFGLHD--------KRVLLDG 83

Query: 122 YKNEVIHFERPLACDSCWFPCCLQSLNVFSPPGALI--GSIEQEWSLLTPIFVIKNGAGD 179
               V+     +      +                +   S+ Q  + L            
Sbjct: 84  SGTPVVTLREKMVSMHDRWQVFRGGSTDQRDLLYTVKRSSMLQLKTKLDVFLGHNKDEKR 143

Query: 180 IVLRIEGPICRYSMCGGDVDFKILSRDGQTEVGRISKQWSGLLREAFTDADYFGISFPGD 239
              R++G     S         + + +    V ++ ++ +  ++  F   D F ++   +
Sbjct: 144 CDFRVKGSWLERS-------CVVYAGESDAIVAQMHRKHT--VQSVFLGKDNFSVTVYPN 194

Query: 240 LDVRMKAVMLGACFLIDAMFYEKAG 264
           +D    A +     ++D +  E   
Sbjct: 195 VDY---AFIASLVVILDDVNREDRA 216

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	274
1zxu_A	217	AT5G01750 protein; PFAM PF01167, TULP, structural	99.95
1zxu_A	217	AT5G01750 protein; PFAM PF01167, TULP, structural	97.43

>1zxu_A AT5G01750 protein; PFAM PF01167, TULP, structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 1.70A {Arabidopsis thaliana} SCOP: d.23.1.2 PDB: 2q4m_A

Probab=99.95  E-value=2.1e-27  Score=207.56  Aligned_cols=177  Identities=15%  Similarity=0.246  Sum_probs=129.5

Q ss_pred             ccccccC-CCeEEEEEeeehhhhhhCcccCceEEEEcCCCCEEEEEEeecCeeeecccCCCCCeEEEEEeCCCCeEEEEE
Q psy11930         52 GLEYLTT-VDQLMVKQKVELLEALIGWETNNKFTVKNAQGQKVFLAVEINDCCTRNCCGPLRPFEMKVLDNYKNEVIHFE  130 (274)
Q Consensus        52 gLe~L~~-l~~l~IkQ~~e~~E~~~g~e~~N~Y~I~d~~Gq~v~~~~E~s~~~~R~~~~~~R~f~l~v~D~~g~~vl~i~  130 (274)
                      |-++++. -.+++|+||...+       ..|+|.|+|++|+.+|.|.++.  +       .++.+++|+|++|++|++|+
T Consensus        29 ~~~~~~~~~~~l~vkqk~~~~-------~~~~f~V~D~~G~~vf~V~~~~--~-------~~~~~~~l~D~~G~~l~~i~   92 (217)
T 1zxu_A           29 DPKYCAPYPIDMAIVRKMMSL-------TDGNFVITDVNGNLLFKVKEPV--F-------GLHDKRVLLDGSGTPVVTLR   92 (217)
T ss_dssp             CGGGBCSSCEEEEEECC------------CCCEEEEETTSCEEEEEECSS--T-------TCCSEEEEECTTSCEEEEEE
T ss_pred             CccccCCCCcEEEEEEEEeEe-------eCCCEEEEeCCCCEEEEEEccc--c-------CCCCEEEEECCCCCEEEEEE
Confidence            3467764 5778999998754       3579999999999999998852  1       34679999999999999999


Q ss_pred             eecccccCCCCCcccEEEEEcCCCC----EEEEEEee--cccccceEEEEcCC----CCEEEEEEcCceeeccCCCceEE
Q psy11930        131 RPLACDSCWFPCCLQSLNVFSPPGA----LIGSIEQE--WSLLTPIFVIKNGA----GDIVLRIEGPICRYSMCGGDVDF  200 (274)
Q Consensus       131 Rp~~c~~cc~~cc~~~~~V~~p~G~----~iG~I~q~--~~~~~~~f~I~d~~----g~~~~~I~Gp~~~~~~cc~~~~F  200 (274)
                      |+..+       +.++++|+.+++.    ++|+|+++  ++ ++++|+|.+++    +...++|+|+++       +++|
T Consensus        93 rk~~~-------~~~~~~v~~~~~~~~~~~i~~vrk~~~~~-~~~~~~V~~~~~~~~~~~~~~I~G~~~-------~~~f  157 (217)
T 1zxu_A           93 EKMVS-------MHDRWQVFRGGSTDQRDLLYTVKRSSMLQ-LKTKLDVFLGHNKDEKRCDFRVKGSWL-------ERSC  157 (217)
T ss_dssp             C-------------CEEEEEETTCCCGGGEEEEEEC--------CCEEEEETTCCC-CCCSEEEESCTT-------TTCC
T ss_pred             ccccc-------cCcEEEEEcCCCCCCCcEEEEEEEecccc-CCCeEEEEECCCCCCCceEEEEEEeEe-------CCEE
Confidence            98543       2678889887654    79999998  78 89999999875    346799999987       8999


Q ss_pred             EEEEcCCCeEEEEEEeeccccccccccCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHhhhccC
Q psy11930        201 KILSRDGQTEVGRISKQWSGLLREAFTDADYFGISFPGDLDVRMKAVMLGACFLIDAMFYEKAG  264 (274)
Q Consensus       201 ~I~~~~g~~~VG~I~Kkw~G~~~e~ft~~D~y~I~Fp~dld~~~KallLaa~ilID~~~fe~~~  264 (274)
                      .|++.+++..||+|+|+|+  ++++|+++|+|.|+|++++|.   +++||++++||+++++++.
T Consensus       158 ~I~~~~~~~~Va~I~kk~~--~~~~~~~~D~y~l~V~p~~D~---aliialvv~iD~~~~~~~~  216 (217)
T 1zxu_A          158 VVYAGESDAIVAQMHRKHT--VQSVFLGKDNFSVTVYPNVDY---AFIASLVVILDDVNREDRA  216 (217)
T ss_dssp             EEEETTTCCEEEEEEEC----------CBCSEEEEECTTSBH---HHHHHHHHHHHHHHC----
T ss_pred             EEEECCCCEEEEEEEeeee--ccccccCCcEEEEEECCCCCH---HHHHHHHHHHHHhhhhccC
Confidence            9999874359999999996  688999999999999999885   9999999999999998753

>1zxu_A AT5G01750 protein; PFAM PF01167, TULP, structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 1.70A {Arabidopsis thaliana} SCOP: d.23.1.2 PDB: 2q4m_A

Probab=97.43  E-value=0.002  Score=55.35  Aligned_cols=99  Identities=8%  Similarity=0.098  Sum_probs=65.2

Q ss_pred             CCCCEEEEEEeecCeeeecccCCCCCeEEEEEeCCCCeEEEEEeecccccCCCCCcccEEEEEcCCCCEEEEEEeecccc
Q psy11930         88 AQGQKVFLAVEINDCCTRNCCGPLRPFEMKVLDNYKNEVIHFERPLACDSCWFPCCLQSLNVFSPPGALIGSIEQEWSLL  167 (274)
Q Consensus        88 ~~Gq~v~~~~E~s~~~~R~~~~~~R~f~l~v~D~~g~~vl~i~Rp~~c~~cc~~cc~~~~~V~~p~G~~iG~I~q~~~~~  167 (274)
                      ..++..+++.++...+.      ..  ...|+|.+|+.+++++... +.      ...++.|.+..|+.+.+|+++.-.+
T Consensus        34 ~~~~~~l~vkqk~~~~~------~~--~f~V~D~~G~~vf~V~~~~-~~------~~~~~~l~D~~G~~l~~i~rk~~~~   98 (217)
T 1zxu_A           34 APYPIDMAIVRKMMSLT------DG--NFVITDVNGNLLFKVKEPV-FG------LHDKRVLLDGSGTPVVTLREKMVSM   98 (217)
T ss_dssp             CSSCEEEEEECC-----------CC--CEEEEETTSCEEEEEECSS-TT------CCSEEEEECTTSCEEEEEEC-----
T ss_pred             CCCCcEEEEEEEEeEee------CC--CEEEEeCCCCEEEEEEccc-cC------CCCEEEEECCCCCEEEEEEcccccc
Confidence            35778888888754331      12  4578999999999998863 21      2678999999999999999976667


Q ss_pred             cceEEEEcCCCC----EEEEEEcCc-eeeccCCCceEEEEEEcC
Q psy11930        168 TPIFVIKNGAGD----IVLRIEGPI-CRYSMCGGDVDFKILSRD  206 (274)
Q Consensus       168 ~~~f~I~d~~g~----~~~~I~Gp~-~~~~~cc~~~~F~I~~~~  206 (274)
                      .++|+|++.++.    ++++|+-.. +..     ...|+|.+.+
T Consensus        99 ~~~~~v~~~~~~~~~~~i~~vrk~~~~~~-----~~~~~V~~~~  137 (217)
T 1zxu_A           99 HDRWQVFRGGSTDQRDLLYTVKRSSMLQL-----KTKLDVFLGH  137 (217)
T ss_dssp             -CEEEEEETTCCCGGGEEEEEEC------------CCEEEEETT
T ss_pred             CcEEEEEcCCCCCCCcEEEEEEEeccccC-----CCeEEEEECC
Confidence            899999988764    689998762 211     4578898764

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	274
d2q4ma1	189	d.23.1.2 (A:24-212) Hypothetical protein At5g01750	4e-04

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	274
d2q4ma1	189	Hypothetical protein At5g01750 {Thale cress (Arabi	99.82
d2q4ma1	189	Hypothetical protein At5g01750 {Thale cress (Arabi	97.0