Psyllid ID: psy12187


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110--
MVDCGSGRANETWLETTSTITLVLVPIYKKLDKALAVLQPFSSRDWYFENGNVQTAWNRLSPADQSRFPFDIRDLDWDDYLETYVRGTMVYHLRDSFEPEVRKKALARYFRS
cccccccHHHHHHHHHHcccccHHHHHHHHHHHHHccccccccccEEEEccHHHHHHHHccccccccEEcccccccHHHHHHHHHHHHcHHHccccccHHHHHHHHHHHccc
cccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEcccHHHHHHHHccHHHHHHccccHHcccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHcc
mvdcgsgranetwlETTSTITLVLVPIYKKLDKALAvlqpfssrdwyfENGNVqtawnrlspadqsrfpfdirdldwddylETYVRGTMVyhlrdsfePEVRKKALARYFRS
mvdcgsgranetwlettstITLVLVPIYKKLDKALAVLQPFSSRDWYFENGNVQTawnrlspadqsrFPFDIRDLDWDDYLETYVRGTMVyhlrdsfepevrkKALARYFRS
MVDCGSGRANETWLETTSTITLVLVPIYKKLDKALAVLQPFSSRDWYFENGNVQTAWNRLSPADQSRFPFDIRDLDWDDYLETYVRGTMVYHLRDSFEPEVRKKALARYFRS
**********ETWLETTSTITLVLVPIYKKLDKALAVLQPFSSRDWYFENGNVQTAWNRLSPADQSRFPFDIRDLDWDDYLETYVRGTMVYHLRDSFE**************
*****SGRANETWLETTSTITLVLVPIYKKLDKALAVLQPFSSRDWYFENGNVQTAWNRLSPADQSRFPFDIRDLDWDDYLETYVRGTMVYHLRDSFEPEVRKKALARYFRS
*********NETWLETTSTITLVLVPIYKKLDKALAVLQPFSSRDWYFENGNVQTAWNRLSPADQSRFPFDIRDLDWDDYLETYVRGTMVYHLRDSFEPEVRKKALARYFRS
*********NETWLETTSTITLVLVPIYKKLDKALAVLQPFSSRDWYFENGNVQTAWNRLSPADQSRFPFDIRDLDWDDYLETYVRGTMVYHLRDSFEPEVRKKALARYFRS
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MVDCGSGRANETWLETTSTITLVLVPIYKKLDKALAVLQPFSSRDWYFENGNVQTAWNRLSPADQSRFPFDIRDLDWDDYLETYVRGTMVYHLRDSFEPEVRKKALARYFRS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query112 2.2.26 [Sep-21-2011]
A1ZAI5625 Putative fatty acyl-CoA r yes N/A 0.776 0.139 0.359 2e-10
Q5ZM72515 Fatty acyl-CoA reductase yes N/A 0.660 0.143 0.381 4e-09
Q7ZXF5515 Fatty acyl-CoA reductase N/A N/A 0.660 0.143 0.368 8e-09
Q922J9515 Fatty acyl-CoA reductase yes N/A 0.660 0.143 0.368 2e-08
Q66H50515 Fatty acyl-CoA reductase yes N/A 0.660 0.143 0.368 2e-08
Q5R834515 Fatty acyl-CoA reductase yes N/A 0.660 0.143 0.368 2e-08
Q8WVX9515 Fatty acyl-CoA reductase yes N/A 0.660 0.143 0.368 2e-08
Q7TNT2515 Fatty acyl-CoA reductase no N/A 0.794 0.172 0.303 5e-08
Q0P5J1515 Fatty acyl-CoA reductase no N/A 0.714 0.155 0.329 7e-08
Q96K12515 Fatty acyl-CoA reductase no N/A 0.642 0.139 0.333 3e-07
>sp|A1ZAI5|FACR1_DROME Putative fatty acyl-CoA reductase CG5065 OS=Drosophila melanogaster GN=CG5065 PE=3 SV=1 Back     alignment and function desciption
 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 51/89 (57%), Gaps = 2/89 (2%)

Query: 24  LVPIYKKLDKALAVLQPFSSRDWYFENGNVQTAWNRLSPADQSRFPFDIRDLDWDDYLET 83
           +V +  K+ KA+  L+ F++R W F++ NV    + LSP D+  F FD+R ++WD Y+E 
Sbjct: 492 VVNVQNKIAKAVECLEYFATRQWRFKDDNVHALLHTLSPKDREIFVFDVRHINWDKYVER 551

Query: 84  YVRG--TMVYHLRDSFEPEVRKKALARYF 110
           YV G    ++  R    P  RK+ L  Y+
Sbjct: 552 YVLGFREFLFKQRPESLPASRKRMLRLYY 580




Catalyzes the reduction of saturated fatty acyl-CoA to fatty alcohols.
Drosophila melanogaster (taxid: 7227)
EC: 1EC: .EC: 2EC: .EC: 1EC: .EC: nEC: 2
>sp|Q5ZM72|FACR1_CHICK Fatty acyl-CoA reductase 1 OS=Gallus gallus GN=FAR1 PE=2 SV=1 Back     alignment and function description
>sp|Q7ZXF5|FACR1_XENLA Fatty acyl-CoA reductase 1 OS=Xenopus laevis GN=far1 PE=2 SV=1 Back     alignment and function description
>sp|Q922J9|FACR1_MOUSE Fatty acyl-CoA reductase 1 OS=Mus musculus GN=Far1 PE=1 SV=1 Back     alignment and function description
>sp|Q66H50|FACR1_RAT Fatty acyl-CoA reductase 1 OS=Rattus norvegicus GN=Far1 PE=2 SV=1 Back     alignment and function description
>sp|Q5R834|FACR1_PONAB Fatty acyl-CoA reductase 1 OS=Pongo abelii GN=FAR1 PE=2 SV=1 Back     alignment and function description
>sp|Q8WVX9|FACR1_HUMAN Fatty acyl-CoA reductase 1 OS=Homo sapiens GN=FAR1 PE=1 SV=1 Back     alignment and function description
>sp|Q7TNT2|FACR2_MOUSE Fatty acyl-CoA reductase 2 OS=Mus musculus GN=Far2 PE=2 SV=1 Back     alignment and function description
>sp|Q0P5J1|FACR2_BOVIN Fatty acyl-CoA reductase 2 OS=Bos taurus GN=FAR2 PE=2 SV=1 Back     alignment and function description
>sp|Q96K12|FACR2_HUMAN Fatty acyl-CoA reductase 2 OS=Homo sapiens GN=FAR2 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query112
328722128 505 PREDICTED: putative fatty acyl-CoA reduc 0.785 0.174 0.433 2e-15
195129697 506 GI13956 [Drosophila mojavensis] gi|19392 0.767 0.169 0.454 1e-13
195109246 508 GI24376 [Drosophila mojavensis] gi|19391 0.776 0.171 0.386 2e-12
189239820 526 PREDICTED: similar to conserved hypothet 0.651 0.138 0.438 2e-12
270012026 542 hypothetical protein TcasGA2_TC006124 [T 0.651 0.134 0.438 2e-12
300116409 541 uncharacterized protein LOC411983 [Apis 0.723 0.149 0.397 7e-12
380028667 429 PREDICTED: putative fatty acyl-CoA reduc 0.723 0.188 0.397 1e-11
270008642 516 hypothetical protein TcasGA2_TC015188 [T 0.732 0.158 0.392 2e-11
195450686 505 GK13679 [Drosophila willistoni] gi|19416 0.767 0.170 0.409 2e-11
91084633 522 PREDICTED: similar to conserved hypothet 0.732 0.157 0.392 2e-11
>gi|328722128|ref|XP_001945465.2| PREDICTED: putative fatty acyl-CoA reductase CG5065-like [Acyrthosiphon pisum] Back     alignment and taxonomy information
 Score = 86.3 bits (212), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 39/90 (43%), Positives = 59/90 (65%), Gaps = 2/90 (2%)

Query: 22  LVLVPIYKKLDKALAVLQPFSSRDWYFENGNVQTAWNRLSPADQSRFPFDIRDLDWDDYL 81
           L LV  YKK+ +   +L+ FS+R+W F N NVQ+ WN L+  DQ+ FPFDI+ + W++YL
Sbjct: 388 LRLVDQYKKIGRFTDILEYFSTREWIFSNKNVQSLWNSLNNDDQTLFPFDIKKMHWEEYL 447

Query: 82  ETYVRGTMVYHLRDSFE--PEVRKKALARY 109
           +TY +G M + L++  +  PE RK+    Y
Sbjct: 448 DTYHKGIMTFLLKEGQDKLPEARKRLHGLY 477




Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195129697|ref|XP_002009292.1| GI13956 [Drosophila mojavensis] gi|193920901|gb|EDW19768.1| GI13956 [Drosophila mojavensis] Back     alignment and taxonomy information
>gi|195109246|ref|XP_001999198.1| GI24376 [Drosophila mojavensis] gi|193915792|gb|EDW14659.1| GI24376 [Drosophila mojavensis] Back     alignment and taxonomy information
>gi|189239820|ref|XP_971534.2| PREDICTED: similar to conserved hypothetical protein [Tribolium castaneum] Back     alignment and taxonomy information
>gi|270012026|gb|EFA08474.1| hypothetical protein TcasGA2_TC006124 [Tribolium castaneum] Back     alignment and taxonomy information
>gi|300116409|ref|NP_001177849.1| uncharacterized protein LOC411983 [Apis mellifera] gi|298569767|gb|ADI87412.1| putative fatty acyl-CoA reductase [Apis mellifera] Back     alignment and taxonomy information
>gi|380028667|ref|XP_003698013.1| PREDICTED: putative fatty acyl-CoA reductase CG5065-like, partial [Apis florea] Back     alignment and taxonomy information
>gi|270008642|gb|EFA05090.1| hypothetical protein TcasGA2_TC015188 [Tribolium castaneum] Back     alignment and taxonomy information
>gi|195450686|ref|XP_002072589.1| GK13679 [Drosophila willistoni] gi|194168674|gb|EDW83575.1| GK13679 [Drosophila willistoni] Back     alignment and taxonomy information
>gi|91084633|ref|XP_974667.1| PREDICTED: similar to conserved hypothetical protein [Tribolium castaneum] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query112
FB|FBgn0034145625 CG5065 [Drosophila melanogaste 0.776 0.139 0.359 1.6e-10
FB|FBgn0032055523 CG13091 [Drosophila melanogast 0.785 0.168 0.314 3.3e-10
UNIPROTKB|E9PPB8139 FAR1 "Fatty acyl-CoA reductase 0.660 0.532 0.368 6.6e-10
UNIPROTKB|Q5ZM72515 FAR1 "Fatty acyl-CoA reductase 0.660 0.143 0.381 1.4e-09
ZFIN|ZDB-GENE-060503-367515 si:dkey-97m3.1 "si:dkey-97m3.1 0.714 0.155 0.353 1.4e-09
UNIPROTKB|G8ENM4515 FAR1 "Uncharacterized protein" 0.660 0.143 0.368 2.4e-09
UNIPROTKB|E2R4R9514 FAR1 "Uncharacterized protein" 0.660 0.143 0.368 3.9e-09
UNIPROTKB|A5PJQ0515 FAR1 "Uncharacterized protein" 0.660 0.143 0.368 3.9e-09
MGI|MGI:1914670515 Far1 "fatty acyl CoA reductase 0.660 0.143 0.368 3.9e-09
RGD|1306647515 Far1 "fatty acyl CoA reductase 0.660 0.143 0.368 3.9e-09
FB|FBgn0034145 CG5065 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 158 (60.7 bits), Expect = 1.6e-10, P = 1.6e-10
 Identities = 32/89 (35%), Positives = 51/89 (57%)

Query:    24 LVPIYKKLDKALAVLQPFSSRDWYFENGNVQTAWNRLSPADQSRFPFDIRDLDWDDYLET 83
             +V +  K+ KA+  L+ F++R W F++ NV    + LSP D+  F FD+R ++WD Y+E 
Sbjct:   492 VVNVQNKIAKAVECLEYFATRQWRFKDDNVHALLHTLSPKDREIFVFDVRHINWDKYVER 551

Query:    84 YVRG--TMVYHLRDSFEPEVRKKALARYF 110
             YV G    ++  R    P  RK+ L  Y+
Sbjct:   552 YVLGFREFLFKQRPESLPASRKRMLRLYY 580




GO:0080019 "fatty-acyl-CoA reductase (alcohol-forming) activity" evidence=IEA
GO:0000166 "nucleotide binding" evidence=IEA
FB|FBgn0032055 CG13091 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
UNIPROTKB|E9PPB8 FAR1 "Fatty acyl-CoA reductase 1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|Q5ZM72 FAR1 "Fatty acyl-CoA reductase 1" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-060503-367 si:dkey-97m3.1 "si:dkey-97m3.1" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|G8ENM4 FAR1 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|E2R4R9 FAR1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|A5PJQ0 FAR1 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
MGI|MGI:1914670 Far1 "fatty acyl CoA reductase 1" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|1306647 Far1 "fatty acyl CoA reductase 1" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query112
cd0907192 cd09071, FAR_C, C-terminal domain of fatty acyl Co 4e-24
pfam0301594 pfam03015, Sterile, Male sterility protein 2e-17
PLN02503605 PLN02503, PLN02503, fatty acyl-CoA reductase 2 4e-07
>gnl|CDD|176924 cd09071, FAR_C, C-terminal domain of fatty acyl CoA reductases Back     alignment and domain information
 Score = 87.6 bits (218), Expect = 4e-24
 Identities = 30/68 (44%), Positives = 44/68 (64%)

Query: 24 LVPIYKKLDKALAVLQPFSSRDWYFENGNVQTAWNRLSPADQSRFPFDIRDLDWDDYLET 83
          L+ +Y+K+ K L +L+ F++ +W F+N N +  W RLS  D+  F FDIR +DWDDY E 
Sbjct: 23 LLKLYRKIHKLLDLLEYFTTNEWRFDNDNTRALWERLSEEDRELFNFDIRSIDWDDYFEN 82

Query: 84 YVRGTMVY 91
          Y+ G   Y
Sbjct: 83 YIPGLRKY 90


C-terminal domain of fatty acyl CoA reductases, a family of SDR-like proteins. SDRs or short-chain dehydrogenases/reductases are Rossmann-fold NAD(P)H-binding proteins. Many proteins in this FAR_C family may function as fatty acyl-CoA reductases (FARs), acting on medium and long chain fatty acids, and have been reported to be involved in diverse processes such as the biosynthesis of insect pheromones, plant cuticular wax production, and mammalian wax biosynthesis. In Arabidopsis thaliana, proteins with this particular architecture have also been identified as the MALE STERILITY 2 (MS2) gene product, which is implicated in male gametogenesis. Mutations in MS2 inhibit the synthesis of exine (sporopollenin), rendering plants unable to reduce pollen wall fatty acids to corresponding alcohols. The function of this C-terminal domain is unclear. Length = 92

>gnl|CDD|111859 pfam03015, Sterile, Male sterility protein Back     alignment and domain information
>gnl|CDD|215279 PLN02503, PLN02503, fatty acyl-CoA reductase 2 Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 112
PF0301594 Sterile: Male sterility protein; InterPro: IPR0042 99.98
cd0907192 FAR_C C-terminal domain of fatty acyl CoA reductas 99.96
KOG1221|consensus467 99.94
PLN02996491 fatty acyl-CoA reductase 99.86
PLN02503605 fatty acyl-CoA reductase 2 99.85
PTZ00374 1108 dihydroxyacetone phosphate acyltransferase; Provis 93.36
>PF03015 Sterile: Male sterility protein; InterPro: IPR004262 This family represents the C-terminal region of the male sterility protein in a number of organisms Back     alignment and domain information
Probab=99.98  E-value=1.5e-32  Score=181.01  Aligned_cols=86  Identities=37%  Similarity=0.766  Sum_probs=84.5

Q ss_pred             cHHHHHHhhCcCchHHHHHHHHHHHHhhccccccceeEeecccHHHHHhhCCcCCCCceeccCCCCCHHHHHHHHHHHHH
Q psy12187         10 NETWLETTSTITLVLVPIYKKLDKALAVLQPFSSRDWYFENGNVQTAWNRLSPADQSRFPFDIRDLDWDDYLETYVRGTM   89 (112)
Q Consensus        10 ~~~~l~~~~g~Kp~l~k~~rki~~~~~~l~~Ft~~eW~F~n~n~~~L~~~ls~~Dr~~F~fD~~~IdW~~Y~~~~i~Gir   89 (112)
                      ..|.+++++|+||+++|+|+|+.+++++++||++++|+|+|+|+.+|++.|+|+|++.|+||+++|||++|+.++++|+|
T Consensus         9 ~~D~~~~l~g~kp~~~k~~~ki~~~~~~~~~F~~~eW~F~~~n~~~L~~~l~~~D~~~F~fD~~~idW~~Y~~~~~~G~r   88 (94)
T PF03015_consen    9 LLDLILRLFGQKPRMVKIYRKIRKALEVLEYFTTNEWIFDNDNTRRLWERLSPEDREIFNFDIRSIDWEEYFRNYIPGIR   88 (94)
T ss_pred             HHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHhCceeecchHHHHHHHhCchhcCceecCCCCCCCHHHHHHHHHHHHH
Confidence            46899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhCC
Q psy12187         90 VYHLRD   95 (112)
Q Consensus        90 kyllKE   95 (112)
                      +|++||
T Consensus        89 kyllke   94 (94)
T PF03015_consen   89 KYLLKE   94 (94)
T ss_pred             HHHhCC
Confidence            999998



The Arabidopsis thaliana male sterility 2 (MS2) protein is involved in male gametogenesis. The MS2 protein shows sequence similarity to a jojoba protein (also a member of this group) that converts wax fatty acids to fatty alcohols. It has been suggested that a possible function of the MS2 protein may be as a fatty acyl reductase in the formation of pollen wall substances [].; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0055114 oxidation-reduction process

>cd09071 FAR_C C-terminal domain of fatty acyl CoA reductases Back     alignment and domain information
>KOG1221|consensus Back     alignment and domain information
>PLN02996 fatty acyl-CoA reductase Back     alignment and domain information
>PLN02503 fatty acyl-CoA reductase 2 Back     alignment and domain information
>PTZ00374 dihydroxyacetone phosphate acyltransferase; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00