Psyllid ID: psy12389

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100----
Protein Sequence
MKFELLLDLMHTLHIRTAQIYRWWADENPETEMSSLWSQGWCPLLQGIARLCCDTRKEPADSDLPLSKVSAPHPIINIVTQPQSYSISGSLDPGAPPQDGETIV
Secondary Structure (PSIPRED)
cHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHcHHHHHHHHHHHHHccccccccccHHHHHHccccHHcccccccHHHHccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHcccccEEEcccccccccccccccEc
Coil and Loop (DISEMBL)
MKFELLLDLMHTLHIRTAQIYRWwadenpetemsslwsqgwcplLQGIARLCCdtrkepadsdlplskvsaphpiinivtqpqsysisgsldpgappqdgetiv
Flexible Loop (DISEMBL)
MKFELLLDLMHTLHIRTAQIYRWWADENPETEMSSLWSQGWCPLLQGIARLCCDTRKEPADSDLPLSKVSAPHPIINIVTQPQSYSisgsldpgappqdgetiv
Low Complexity Region (SEG)
MKFELLLDLMHTLHIRTAQIYRWWADENPETEMSSLWSQGWCPLLQGIARLCCDTRKEPADSDLPLSKVSAPHPIINIVTQPQSYSISGSLDPGAPPQDGETIV
Disordered region (IsUnstruct)
**FELLLDLMHTLHIRTAQIYRWWADENPETEMSSLWSQGWCPLLQGIARLCCDT*******************IINIV*************************
Disordered Region (DISOPRED)
MKFELLLDLMHTLHIRTAQIYRWWA******EMSSLWSQGWCPLLQGIARLCCDTRKEPADSDLPLSKVSAPHPIINIVTQPQSYS******************
Disordered Region (DISEMBL)
MKFELLLDLMHTLHIRTAQIYRWWADENPETEMSSLWSQGWCPLLQGIARLCCDTRKEPADSDLPLSKVSAPHPIINIVTQPQSYSI*****************
Disordered Region (DISPRO)
*KFELLLDLMHTLHIRTAQIYRWWADENPETEMSSLWSQGWCPLLQGIARLCCDTRKEPADSDLPLSKVSAPHPIINIVTQPQSYSIS*SLDPG**********
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MKFELLLDLMHTLHIRTAQIYRWWADENPETEMSSLWSQGWCPLLQGIARLCCDTRKEPADSDLPLSKVSAPHPIINIVTQPQSYSISGSLDPGAPPQDGETIV
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	104	2.2.26 [Sep-21-2011]
Q92538	1859	Golgi-specific brefeldin	yes	N/A	0.509	0.028	0.532	3e-12
Q9R1D7	1856	Golgi-specific brefeldin	yes	N/A	0.509	0.028	0.532	3e-12

>sp|Q92538|GBF1_HUMAN Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 OS=Homo sapiens GN=GBF1 PE=1 SV=2

 Score = 70.1 bits (170), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 33/62 (53%), Positives = 39/62 (62%), Gaps = 9/62 (14%)

Query: 6    LLDLMHTLHIRTAQIYRWWADENP---------ETEMSSLWSQGWCPLLQGIARLCCDTR 56
            LLDLMHTLH R A IY  WA+E           E +  +LW+  WCPLLQGIA LCCD R
Sbjct: 1498 LLDLMHTLHTRAASIYSSWAEEQRHLETGGQKIEADSRTLWAHCWCPLLQGIACLCCDAR 1557

Query: 57   KE 58
            ++
Sbjct: 1558 RQ 1559

Promotes guanine-nucleotide exchange on ARF5. Promotes the activation of ARF5 through replacement of GDP with GTP.
Homo sapiens (taxid: 9606)

>sp|Q9R1D7|GBF1_CRIGR Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 OS=Cricetulus griseus GN=GBF1 PE=2 SV=1

 Score = 70.1 bits (170), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 33/62 (53%), Positives = 39/62 (62%), Gaps = 9/62 (14%)

Query: 6    LLDLMHTLHIRTAQIYRWWADENP---------ETEMSSLWSQGWCPLLQGIARLCCDTR 56
            LLDLMHTLH R A IY  WA+E           E +  +LW+  WCPLLQGIA LCCD R
Sbjct: 1498 LLDLMHTLHTRAASIYSSWAEEQRHLESGGRKIEADSRTLWAHCWCPLLQGIACLCCDAR 1557

Query: 57   KE 58
            ++
Sbjct: 1558 RQ 1559

Promotes guanine-nucleotide exchange on ARF5. Promotes the activation of ARF5 through replacement of GDP with GTP.

Cricetulus griseus (taxid: 10029)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	104
242020495	1993	golgi-specific brefeldin A-resistance gu	0.509	0.026	0.792	2e-20
328706091	1670	PREDICTED: golgi-specific brefeldin A-re	0.509	0.031	0.754	9e-19
189240049	1786	PREDICTED: similar to golgi-specific bre	0.509	0.029	0.722	3e-17
270011755	1742	hypothetical protein TcasGA2_TC005830 [T	0.509	0.030	0.722	3e-17
347966090	2134	AGAP001527-PA [Anopheles gambiae str. PE	0.509	0.024	0.722	8e-16
380021966	1894	PREDICTED: LOW QUALITY PROTEIN: golgi-sp	0.509	0.027	0.698	9e-16
328786075	1869	PREDICTED: golgi-specific brefeldin A-re	0.509	0.028	0.698	1e-15
383852794	1845	PREDICTED: LOW QUALITY PROTEIN: golgi-sp	0.509	0.028	0.679	2e-15
321468534	1678	hypothetical protein DAPPUDRAFT_197351 [	0.509	0.031	0.565	3e-15
170029975	1868	golgi-specific brefeldin a-resistance fa	0.509	0.028	0.703	4e-15

>gi|242020495|ref|XP_002430688.1| golgi-specific brefeldin A-resistance guanine nucleotide exchange factor, putative [Pediculus humanus corporis] gi|212515878|gb|EEB17950.1| golgi-specific brefeldin A-resistance guanine nucleotide exchange factor, putative [Pediculus humanus corporis]

 Score =  102 bits (255), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 42/53 (79%), Positives = 47/53 (88%)

Query: 6    LLDLMHTLHIRTAQIYRWWADENPETEMSSLWSQGWCPLLQGIARLCCDTRKE 58
            LLDLMHTLH RTAQI+RWWA EN +T  +SLW QGWCPLLQGIARLCCD+RK+
Sbjct: 1437 LLDLMHTLHTRTAQIFRWWAAENADTNFTSLWFQGWCPLLQGIARLCCDSRKQ 1489

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328706091|ref|XP_001948659.2| PREDICTED: golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1-like [Acyrthosiphon pisum]

 Score = 97.4 bits (241), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 40/53 (75%), Positives = 46/53 (86%)

Query: 6    LLDLMHTLHIRTAQIYRWWADENPETEMSSLWSQGWCPLLQGIARLCCDTRKE 58
            LLDLMHTLH  TA IYRWW++ENP+TE+ SLWS GWCPLLQGIA LCCD R++
Sbjct: 1329 LLDLMHTLHTSTADIYRWWSEENPDTELISLWSYGWCPLLQGIASLCCDCRRD 1381

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|189240049|ref|XP_967092.2| PREDICTED: similar to golgi-specific brefeldin a-resistance factor [Tribolium castaneum]

 Score = 92.4 bits (228), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 39/54 (72%), Positives = 46/54 (85%), Gaps = 1/54 (1%)

Query: 6    LLDLMHTLHIRTAQIYRWWADENPE-TEMSSLWSQGWCPLLQGIARLCCDTRKE 58
            LLDLMHTLH RTAQI++WWA+E     + +SLW+QGWCPLLQGIARLCCD R+E
Sbjct: 1393 LLDLMHTLHTRTAQIFKWWAEEGGALAKETSLWTQGWCPLLQGIARLCCDVRRE 1446

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270011755|gb|EFA08203.1| hypothetical protein TcasGA2_TC005830 [Tribolium castaneum]

 Score = 92.4 bits (228), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 39/54 (72%), Positives = 46/54 (85%), Gaps = 1/54 (1%)

Query: 6    LLDLMHTLHIRTAQIYRWWADENPE-TEMSSLWSQGWCPLLQGIARLCCDTRKE 58
            LLDLMHTLH RTAQI++WWA+E     + +SLW+QGWCPLLQGIARLCCD R+E
Sbjct: 1349 LLDLMHTLHTRTAQIFKWWAEEGGALAKETSLWTQGWCPLLQGIARLCCDVRRE 1402

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|347966090|ref|XP_321598.5| AGAP001527-PA [Anopheles gambiae str. PEST] gi|333470216|gb|EAA00837.5| AGAP001527-PA [Anopheles gambiae str. PEST]

 Score = 87.8 bits (216), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 39/54 (72%), Positives = 44/54 (81%), Gaps = 1/54 (1%)

Query: 6    LLDLMHTLHIRTAQIYRWWADENPET-EMSSLWSQGWCPLLQGIARLCCDTRKE 58
            LLDLMHTLH RTAQI+RWWA+E     + SSLWSQGWCPLLQGIARL  D R++
Sbjct: 1525 LLDLMHTLHTRTAQIFRWWAEEGGAVPQCSSLWSQGWCPLLQGIARLATDQRRQ 1578

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380021966|ref|XP_003694826.1| PREDICTED: LOW QUALITY PROTEIN: golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1-like [Apis florea]

 Score = 87.4 bits (215), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 37/53 (69%), Positives = 42/53 (79%)

Query: 6    LLDLMHTLHIRTAQIYRWWADENPETEMSSLWSQGWCPLLQGIARLCCDTRKE 58
            LLDLMHTLH R AQ++RWWA+E   TE  SLW Q W PLLQGIARLCCD R++
Sbjct: 1398 LLDLMHTLHTRIAQVFRWWAEEGNATENXSLWLQVWRPLLQGIARLCCDARRQ 1450

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328786075|ref|XP_001123021.2| PREDICTED: golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 [Apis mellifera]

 Score = 87.0 bits (214), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 37/53 (69%), Positives = 42/53 (79%)

Query: 6    LLDLMHTLHIRTAQIYRWWADENPETEMSSLWSQGWCPLLQGIARLCCDTRKE 58
            LLDLMHTLH R AQ++RWWA+E    E  SLW Q W PLLQGIARLCCDTR++
Sbjct: 1385 LLDLMHTLHTRIAQVFRWWAEEGNAMENVSLWLQVWRPLLQGIARLCCDTRRQ 1437

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383852794|ref|XP_003701910.1| PREDICTED: LOW QUALITY PROTEIN: golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1-like [Megachile rotundata]

 Score = 86.7 bits (213), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 36/53 (67%), Positives = 41/53 (77%)

Query: 6    LLDLMHTLHIRTAQIYRWWADENPETEMSSLWSQGWCPLLQGIARLCCDTRKE 58
            LLDLMHTLH RT Q++RWWA+E    E  SLW Q W PLLQGIARLCCD R++
Sbjct: 1423 LLDLMHTLHTRTGQVFRWWAEEGNAMEGVSLWPQAWRPLLQGIARLCCDARRQ 1475

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|321468534|gb|EFX79518.1| hypothetical protein DAPPUDRAFT_197351 [Daphnia pulex]

 Score = 85.9 bits (211), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 39/69 (56%), Positives = 46/69 (66%), Gaps = 16/69 (23%)

Query: 6    LLDLMHTLHIRTAQIYRWWADENPETEMSS----------------LWSQGWCPLLQGIA 49
            LLDLMHTLH R AQIY+WWA E+ E +++S                LW +GWCPLLQGIA
Sbjct: 1428 LLDLMHTLHTRAAQIYQWWASESGEADVASADKEKNATTSFQLGPSLWCRGWCPLLQGIA 1487

Query: 50   RLCCDTRKE 58
            RLCCD RK+
Sbjct: 1488 RLCCDARKQ 1496

Source: Daphnia pulex

Species: Daphnia pulex

Genus: Daphnia

Family: Daphniidae

Order: Diplostraca

Class: Branchiopoda

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170029975|ref|XP_001842866.1| golgi-specific brefeldin a-resistance factor [Culex quinquefasciatus] gi|167865326|gb|EDS28709.1| golgi-specific brefeldin a-resistance factor [Culex quinquefasciatus]

 Score = 85.5 bits (210), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 38/54 (70%), Positives = 44/54 (81%), Gaps = 1/54 (1%)

Query: 6    LLDLMHTLHIRTAQIYRWWADENPET-EMSSLWSQGWCPLLQGIARLCCDTRKE 58
            LLDLMHTLH RTAQI+RWWA+E     + S+LWSQGWCPLLQGIARL  D R++
Sbjct: 1417 LLDLMHTLHTRTAQIFRWWAEEGGALPQCSALWSQGWCPLLQGIARLATDQRRQ 1470

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	104
FB|FBgn0264560	1983	garz "gartenzwerg" [Drosophila	0.509	0.026	0.666	2.6e-14
RGD|1307160	1807	Gbf1 "golgi brefeldin A resist	0.509	0.029	0.532	1.1e-11
UNIPROTKB|F1NGJ3	1804	GBF1 "Uncharacterized protein"	0.509	0.029	0.564	3.4e-11
UNIPROTKB|F1PB58	1820	GBF1 "Uncharacterized protein"	0.509	0.029	0.532	1.2e-10
UNIPROTKB|F1PB51	1857	GBF1 "Uncharacterized protein"	0.509	0.028	0.532	1.2e-10
UNIPROTKB|Q92538	1859	GBF1 "Golgi-specific brefeldin	0.509	0.028	0.532	1.2e-10
UNIPROTKB|E1BMC4	1861	GBF1 "Uncharacterized protein"	0.509	0.028	0.532	1.2e-10
UNIPROTKB|F1S8S9	1865	GBF1 "Uncharacterized protein"	0.509	0.028	0.532	1.2e-10
ZFIN|ZDB-GENE-081107-54	1786	si:dkey-183c23.1 "si:dkey-183c	0.509	0.029	0.507	3.8e-10
UNIPROTKB|H8ESE7	485	gbf-1 "Protein GBF-1, isoform	0.5	0.107	0.403	5.5e-07

FB|FBgn0264560 garz "gartenzwerg" [Drosophila melanogaster (taxid:7227)]

 Score = 193 (73.0 bits), Expect = 2.6e-14, Sum P(2) = 2.6e-14
 Identities = 36/54 (66%), Positives = 42/54 (77%)

Query:     6 LLDLMHTLHIRTAQIYRWWADENPETEMSS-LWSQGWCPLLQGIARLCCDTRKE 58
             LLDLM+TL+ RTAQI+RWWA+E      S+ LWS GWCPLLQGIARL  D R+E
Sbjct:  1449 LLDLMYTLYTRTAQIFRWWAEEGCTVPQSAALWSPGWCPLLQGIARLAMDRRRE 1502

GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=ISS

GO:0006891 "intra-Golgi vesicle-mediated transport" evidence=ISS

GO:0005798 "Golgi-associated vesicle" evidence=ISS

GO:0005085 "guanyl-nucleotide exchange factor activity" evidence=ISS

GO:0006911 "phagocytosis, engulfment" evidence=IMP

GO:0000902 "cell morphogenesis" evidence=IMP

GO:0007431 "salivary gland development" evidence=IDA

GO:0002064 "epithelial cell development" evidence=IDA

GO:0005801 "cis-Golgi network" evidence=IDA

GO:0035149 "lumen formation, open tracheal system" evidence=IDA

GO:0032940 "secretion by cell" evidence=IDA

GO:0000137 "Golgi cis cisterna" evidence=IDA

GO:0007030 "Golgi organization" evidence=IMP

GO:0009306 "protein secretion" evidence=IMP

GO:0032312 "regulation of ARF GTPase activity" evidence=IGI

GO:0005086 "ARF guanyl-nucleotide exchange factor activity" evidence=IGI;IBA

GO:0035158 "regulation of tube diameter, open tracheal system" evidence=IMP

GO:0005802 "trans-Golgi network" evidence=IBA

RGD|1307160 Gbf1 "golgi brefeldin A resistant guanine nucleotide exchange factor 1" [Rattus norvegicus (taxid:10116)]

 Score = 165 (63.1 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
 Identities = 33/62 (53%), Positives = 39/62 (62%)

Query:     6 LLDLMHTLHIRTAQIYRWWADENP---------ETEMSSLWSQGWCPLLQGIARLCCDTR 56
             LLDLMHTLH R A IY  WA+E           E +  +LW+  WCPLLQGIA LCCD R
Sbjct:  1446 LLDLMHTLHTRAASIYSSWAEEQRHLETGGRKIEADSRTLWAHCWCPLLQGIACLCCDAR 1505

Query:    57 KE 58
             ++
Sbjct:  1506 RQ 1507

GO:0003674 "molecular_function" evidence=ND

GO:0005086 "ARF guanyl-nucleotide exchange factor activity" evidence=IBA

GO:0005739 "mitochondrion" evidence=IDA

GO:0005777 "peroxisome" evidence=IDA

GO:0005788 "endoplasmic reticulum lumen" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=ISO

GO:0005795 "Golgi stack" evidence=IDA

GO:0005801 "cis-Golgi network" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IBA

GO:0008150 "biological_process" evidence=ND

GO:0016192 "vesicle-mediated transport" evidence=IBA

GO:0032012 "regulation of ARF protein signal transduction" evidence=IEA

UNIPROTKB|F1NGJ3 GBF1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 170 (64.9 bits), Expect = 3.4e-11, P = 3.4e-11
 Identities = 35/62 (56%), Positives = 39/62 (62%)

Query:     6 LLDLMHTLHIRTAQIYRWWADENPETEMS---------SLWSQGWCPLLQGIARLCCDTR 56
             LLDLMHTLH R A IY  WA+E    E S         +LWS  WCPLLQGIA LCCD R
Sbjct:  1439 LLDLMHTLHTRAASIYSSWAEEQRHLETSGRKIEADSRTLWSNCWCPLLQGIAWLCCDAR 1498

Query:    57 KE 58
             ++
Sbjct:  1499 RQ 1500

GO:0005086 "ARF guanyl-nucleotide exchange factor activity" evidence=IEA

GO:0032012 "regulation of ARF protein signal transduction" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

UNIPROTKB|F1PB58 GBF1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 165 (63.1 bits), Expect = 1.2e-10, P = 1.2e-10
 Identities = 33/62 (53%), Positives = 39/62 (62%)

Query:     6 LLDLMHTLHIRTAQIYRWWADENP---------ETEMSSLWSQGWCPLLQGIARLCCDTR 56
             LLDLMHTLH R A IY  WA+E           E +  +LW+  WCPLLQGIA LCCD R
Sbjct:  1459 LLDLMHTLHTRAASIYSSWAEEQRHLETGGRKIEADSRTLWAHCWCPLLQGIACLCCDAR 1518

Query:    57 KE 58
             ++
Sbjct:  1519 RQ 1520

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0032012 "regulation of ARF protein signal transduction" evidence=IEA

GO:0005086 "ARF guanyl-nucleotide exchange factor activity" evidence=IEA

UNIPROTKB|F1PB51 GBF1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 165 (63.1 bits), Expect = 1.2e-10, P = 1.2e-10
 Identities = 33/62 (53%), Positives = 39/62 (62%)

Query:     6 LLDLMHTLHIRTAQIYRWWADENP---------ETEMSSLWSQGWCPLLQGIARLCCDTR 56
             LLDLMHTLH R A IY  WA+E           E +  +LW+  WCPLLQGIA LCCD R
Sbjct:  1496 LLDLMHTLHTRAASIYSSWAEEQRHLETGGRKIEADSRTLWAHCWCPLLQGIACLCCDAR 1555

Query:    57 KE 58
             ++
Sbjct:  1556 RQ 1557

GO:0032012 "regulation of ARF protein signal transduction" evidence=IEA

GO:0005086 "ARF guanyl-nucleotide exchange factor activity" evidence=IEA

UNIPROTKB|Q92538 GBF1 "Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1" [Homo sapiens (taxid:9606)]

 Score = 165 (63.1 bits), Expect = 1.2e-10, P = 1.2e-10
 Identities = 33/62 (53%), Positives = 39/62 (62%)

Query:     6 LLDLMHTLHIRTAQIYRWWADENP---------ETEMSSLWSQGWCPLLQGIARLCCDTR 56
             LLDLMHTLH R A IY  WA+E           E +  +LW+  WCPLLQGIA LCCD R
Sbjct:  1498 LLDLMHTLHTRAASIYSSWAEEQRHLETGGQKIEADSRTLWAHCWCPLLQGIACLCCDAR 1557

Query:    57 KE 58
             ++
Sbjct:  1558 RQ 1559

GO:0032012 "regulation of ARF protein signal transduction" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0005777 "peroxisome" evidence=IEA

GO:0005788 "endoplasmic reticulum lumen" evidence=IEA

GO:0005795 "Golgi stack" evidence=IEA

GO:0005801 "cis-Golgi network" evidence=IEA

GO:0005086 "ARF guanyl-nucleotide exchange factor activity" evidence=IBA

GO:0005802 "trans-Golgi network" evidence=IBA

GO:0016192 "vesicle-mediated transport" evidence=IBA

GO:0000139 "Golgi membrane" evidence=TAS

GO:0006890 "retrograde vesicle-mediated transport, Golgi to ER" evidence=TAS

GO:0006892 "post-Golgi vesicle-mediated transport" evidence=TAS

GO:0016044 "cellular membrane organization" evidence=TAS

GO:0048205 "COPI coating of Golgi vesicle" evidence=TAS

GO:0005794 "Golgi apparatus" evidence=IDA

UNIPROTKB|E1BMC4 GBF1 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 165 (63.1 bits), Expect = 1.2e-10, P = 1.2e-10
 Identities = 33/62 (53%), Positives = 39/62 (62%)

Query:     6 LLDLMHTLHIRTAQIYRWWADENP---------ETEMSSLWSQGWCPLLQGIARLCCDTR 56
             LLDLMHTLH R A IY  WA+E           E +  +LW+  WCPLLQGIA LCCD R
Sbjct:  1500 LLDLMHTLHTRAASIYSSWAEEQRHLETGGRKIEADSRTLWAHCWCPLLQGIACLCCDAR 1559

Query:    57 KE 58
             ++
Sbjct:  1560 RQ 1561

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0032012 "regulation of ARF protein signal transduction" evidence=IEA

GO:0005086 "ARF guanyl-nucleotide exchange factor activity" evidence=IEA

UNIPROTKB|F1S8S9 GBF1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 165 (63.1 bits), Expect = 1.2e-10, P = 1.2e-10
 Identities = 33/62 (53%), Positives = 39/62 (62%)

Query:     6 LLDLMHTLHIRTAQIYRWWADENP---------ETEMSSLWSQGWCPLLQGIARLCCDTR 56
             LLDLMHTLH R A IY  WA+E           E +  +LW+  WCPLLQGIA LCCD R
Sbjct:  1504 LLDLMHTLHTRAASIYSSWAEEQRHLETGGRKIEADSRTLWAHCWCPLLQGIACLCCDAR 1563

Query:    57 KE 58
             ++
Sbjct:  1564 RQ 1565

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0032012 "regulation of ARF protein signal transduction" evidence=IEA

GO:0005086 "ARF guanyl-nucleotide exchange factor activity" evidence=IEA

ZFIN|ZDB-GENE-081107-54 si:dkey-183c23.1 "si:dkey-183c23.1" [Danio rerio (taxid:7955)]

 Score = 152 (58.6 bits), Expect = 3.8e-10, Sum P(2) = 3.8e-10
 Identities = 32/63 (50%), Positives = 39/63 (61%)

Query:     6 LLDLMHTLHIRTAQIYRWWADENP---------ETEMSSLWSQGWCPLLQ-GIARLCCDT 55
             LLDLMHTLH R A IY  WA+E           E +  +LW+  WCPLLQ G+A LCCD 
Sbjct:  1434 LLDLMHTLHTRAAGIYSSWAEEQRHLEDAGKKIEADSQTLWTSCWCPLLQVGMAWLCCDA 1493

Query:    56 RKE 58
             R++
Sbjct:  1494 RRQ 1496

GO:0032012 "regulation of ARF protein signal transduction" evidence=IEA

GO:0005086 "ARF guanyl-nucleotide exchange factor activity" evidence=IEA

UNIPROTKB|H8ESE7 gbf-1 "Protein GBF-1, isoform b" [Caenorhabditis elegans (taxid:6239)]

 Score = 100 (40.3 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
 Identities = 23/57 (40%), Positives = 31/57 (54%)

Query:     6 LLDLMHTLHIRTAQIYRWWAD-ENPETE----MSSLWSQGWCPLLQGIARLCCDTRK 57
             LLDL   LH +T  I+  WA   +P       ++ +W+  W PLLQ I RL CD R+
Sbjct:     5 LLDLCSQLHSQTPAIFAKWAQGASPAASDLATVAFIWTDIWRPLLQAIGRLSCDCRR 61

GO:0005802 "trans-Golgi network" evidence=IBA

GO:0005086 "ARF guanyl-nucleotide exchange factor activity" evidence=IBA

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9R1D7	GBF1_CRIGR	No assigned EC number	0.5322	0.5096	0.0285	yes	N/A
Q92538	GBF1_HUMAN	No assigned EC number	0.5322	0.5096	0.0285	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	104
KOG0928|consensus	1386		97.62
PLN03076	1780	ARF guanine nucleotide exchange factor (ARF-GEF);	96.72
PF02985	31	HEAT: HEAT repeat; InterPro: IPR000357 The HEAT re	85.92

>KOG0928|consensus

Probab=97.62  E-value=1.8e-05  Score=75.02  Aligned_cols=51  Identities=20%  Similarity=0.184  Sum_probs=43.7

Q ss_pred             hhhhhhhhHHHHHHHhhhcCCCchhhhhhhhhccccCCcchhhhcCCCceee
Q psy12389         35 SLWSQGWCPLLQGIARLCCDTRKEPADSDLPLSKVSAPHPIINIVTQPQSYS   86 (104)
Q Consensus        35 ~lWs~~W~PLLqgiarqC~d~rReVR~~Ait~LQRsLLsPeL~~l~~~~~~s   86 (104)
                      ..=+..|+||++++.++|+|.||+||++|+++||| ++....+-+.++.|.+
T Consensus      1181 ~~~~~~wl~l~~~~~kl~L~~r~~vRn~aL~~lqr-~~~~~~q~l~~~~~~~ 1231 (1386)
T KOG0928|consen 1181 NYRSEIWLILLQIIRKLCLLSRRGVRNAALTKLQR-IIGALDQGLAHSYWNP 1231 (1386)
T ss_pred             hhhHHHHHHHHHHhhhcchhhhhhhHHHHHHHHHH-HHHhhhcccchHHHHH
Confidence            33333999999999999999999999999999999 4777778888877765

>PLN03076 ARF guanine nucleotide exchange factor (ARF-GEF); Provisional

Probab=96.72  E-value=0.0014  Score=63.96  Aligned_cols=37  Identities=30%  Similarity=0.340  Sum_probs=34.2

Q ss_pred             hhhhhhhHHHHHHHhhhcCCCchhhhhhhhhccccCC
Q psy12389         36 LWSQGWCPLLQGIARLCCDTRKEPADSDLPLSKVSAP   72 (104)
Q Consensus        36 lWs~~W~PLLqgiarqC~d~rReVR~~Ait~LQRsLL   72 (104)
                      .-..+|.|||.++...|.|+|.|||+.|+.+|.|+|.
T Consensus      1340 ~~~~lW~pLL~~Ls~l~~D~RlEVR~~ALqtLF~iL~ 1376 (1780)
T PLN03076       1340 DHLYFWFPLLAGLSELSFDPRPEIRKSALQVLFDTLR 1376 (1780)
T ss_pred             hHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHH
Confidence            3457999999999999999999999999999999985

>PF02985 HEAT: HEAT repeat; InterPro: IPR000357 The HEAT repeat is a tandemly repeated, 37-47 amino acid long module occurring in a number of cytoplasmic proteins, including the four name-giving proteins huntingtin, elongation factor 3 (EF3), the 65 Kd alpha regulatory subunit of protein phosphatase 2A (PP2A) and the yeast PI3-kinase TOR1 []

Probab=85.92  E-value=0.54  Score=25.56  Aligned_cols=25  Identities=16%  Similarity=0.052  Sum_probs=19.2

Q ss_pred             HHHHHhhhcCCCchhhhhhhhhccc
Q psy12389         45 LQGIARLCCDTRKEPADSDLPLSKV   69 (104)
Q Consensus        45 LqgiarqC~d~rReVR~~Ait~LQR   69 (104)
                      +..+-.++.|+..+||.+|+..|..
T Consensus         2 lp~l~~~l~D~~~~VR~~a~~~l~~   26 (31)
T PF02985_consen    2 LPILLQLLNDPSPEVRQAAAECLGA   26 (31)
T ss_dssp             HHHHHHHHT-SSHHHHHHHHHHHHH
T ss_pred             HHHHHHHcCCCCHHHHHHHHHHHHH
Confidence            4456678889999999999987754

Arrays of HEAT repeats consists of 3 to 36 units forming a rod-like helical structure and appear to function as protein-protein interaction surfaces. It has been noted that many HEAT repeat-containing proteins are involved in intracellular transport processes. In the crystal structure of PP2A PR65/A [], the HEAT repeats consist of pairs of antiparallel alpha helices [].; GO: 0005515 protein binding; PDB: 3FGA_A 2PF4_C 2IAE_A 2BKU_D 3EA5_B 3ND2_A 2BPT_A 2NYL_A 2NPP_D 2PKG_B ....

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00