Psyllid ID: psy12404

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120---
Protein Sequence
MVEEETRRYRPTKNYLEHIPPLDINKFETEIMRKDFERIQQRLPMEPLSMIRYKLPQPPTGKMSDIAAWTECVENSMSQLEHQSTRIVNLQLMLEYGPETWKEYLQTLVNCVSQAQSKLIQLR
Secondary Structure (PSIPRED)
cHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHc
Secondary Structure Prediction (SSPRO)
ccHHHHHHccccHHHHHHcccccccccccHHHHHHHHHHHcccccccccccHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
mveeetrryrptknylehippldinkFETEIMRKDFERIqqrlpmeplsmiryklpqpptgkmsdiAAWTECVENSMSQLEHQSTRIVNLQLMLEYGPETWKEYLQTLVNCVSQAQSKLIQLR
Flexible Loop (DISEMBL)
mveeetrryrptknylehippldinKFETEIMRKDFERIqqrlpmeplsMIRYKLPQPPTGKMSDIAAWTECVENSMSQLEHQSTRIVNLQLMLEYGPETWKEYLQTLVNCVSQAQSKLIQLR
Low Complexity Region (SEG)
MVEEETRRYRPTKNYLEHIPPLDINKFETEIMRKDFERIQQRLPMEPLSMIRYKLPQPPTGKMSDIAAWTECVENSMSQLEHQSTRIVNLQLMLEYGPETWKEYLQTLVNCVSQAQSKLIQLR
Disordered region (IsUnstruct)
**************YLEHIPPLDINKFETEIMRKDFERI***********IRY***********DIAAWTECVENSMSQLEHQSTRIVNLQLMLEYGPETWKEYLQTLVNCVSQ*********
Disordered Region (DISOPRED)
MV*************LEHIPPLDINKFETEIMRKDFE*******************************WTECVENSMSQLEHQSTRIVNLQLMLEYGPETWKEYLQTLVNCVSQAQS******
Disordered Region (DISEMBL)
*********RPTKNYLEHIPPLDINKFETEIMRKDFERIQQRLPMEPLSMIRYKLPQPPTGKMSDIAAWTECVENSMSQLEHQSTRIVNLQLMLEYGPETWKEYLQTLVNCVSQAQSKLIQLR
Disordered Region (DISPRO)
MVEEETRRYRPTKNYLEHIPPLDINKFETEIMRKDFERIQQRLPMEPLSMIRYKLPQPPTGKMSDIAAWTECVENSMSQLEHQSTRIVNLQLMLEYGPETWKEYLQTLVNCVSQAQSKLIQLR
Transmembrane Helix (TMHMM)
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Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
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TM Helix, Signal Peptide (MEMSAT_SVM)
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TM Helix, Signal Peptide (Phobius)
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Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MVEEETRRYRPTKNYLEHIPPLDINKFETEIMRKDFERIQQRLPMEPLSMIRYKLPQPPTGKMSDIAAWTECVENSMSQLEHQSTRIVNLQLMLEYGPETWKEYLQTLVNCVSQAQSKLIQLR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	123	2.2.26 [Sep-21-2011]
Q6PBE2	223	Pre-mRNA-splicing factor	yes	N/A	0.959	0.529	0.559	2e-33
Q9D287	225	Pre-mRNA-splicing factor	yes	N/A	0.959	0.524	0.550	2e-33
O75934	225	Pre-mRNA-splicing factor	yes	N/A	0.959	0.524	0.550	2e-33
Q5RAX7	226	Pre-mRNA-splicing factor	yes	N/A	0.959	0.522	0.563	3e-33
Q5RKQ0	225	Pre-mRNA-splicing factor	yes	N/A	0.959	0.524	0.533	2e-32
Q54SG7	226	Pre-mRNA-splicing factor	yes	N/A	0.861	0.469	0.312	9e-10
Q949S9	253	Pre-mRNA-splicing factor	yes	N/A	0.821	0.399	0.333	5e-09

>sp|Q6PBE2|SPF27_XENTR Pre-mRNA-splicing factor SPF27 OS=Xenopus tropicalis GN=bcas2 PE=2 SV=1

 Score =  140 bits (354), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 66/118 (55%), Positives = 86/118 (72%)

Query: 6   TRRYRPTKNYLEHIPPLDINKFETEIMRKDFERIQQRLPMEPLSMIRYKLPQPPTGKMSD 65
           TRRYRPTKNYL ++P  D + FETEIMR +FER+  R P+E LSM RY+LP P +G+ +D
Sbjct: 40  TRRYRPTKNYLSYLPTPDYSAFETEIMRNEFERLSSRQPLELLSMKRYELPAPLSGQRND 99

Query: 66  IAAWTECVENSMSQLEHQSTRIVNLQLMLEYGPETWKEYLQTLVNCVSQAQSKLIQLR 123
           I AW ECV NSM+QLEHQ+ RI NL+LM ++G   WK Y + L++ +  AQ  L +LR
Sbjct: 100 ITAWQECVNNSMAQLEHQAVRIENLELMSQHGCNAWKVYNENLLHMIDCAQKDLQKLR 157

Involved in mRNA splicing.
Xenopus tropicalis (taxid: 8364)

>sp|Q9D287|SPF27_MOUSE Pre-mRNA-splicing factor SPF27 OS=Mus musculus GN=Bcas2 PE=2 SV=1

 Score =  140 bits (353), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 65/118 (55%), Positives = 86/118 (72%)

Query: 6   TRRYRPTKNYLEHIPPLDINKFETEIMRKDFERIQQRLPMEPLSMIRYKLPQPPTGKMSD 65
           TRRYRPTKNYL ++   D + FET+IMR +FER+  R P+E LSM RY+LP P +G+ +D
Sbjct: 40  TRRYRPTKNYLSYLTAPDYSAFETDIMRNEFERLAARQPIELLSMKRYELPAPSSGQKND 99

Query: 66  IAAWTECVENSMSQLEHQSTRIVNLQLMLEYGPETWKEYLQTLVNCVSQAQSKLIQLR 123
           I AW ECV NSM+QLEHQ+ RI NL+LM ++G   WK Y + LV+ +  AQ +L +LR
Sbjct: 100 ITAWQECVNNSMAQLEHQAVRIENLELMSQHGCNAWKVYNENLVHMIEHAQKELQKLR 157

Involved in mRNA splicing.

Mus musculus (taxid: 10090)

>sp|O75934|SPF27_HUMAN Pre-mRNA-splicing factor SPF27 OS=Homo sapiens GN=BCAS2 PE=1 SV=1

 Score =  140 bits (353), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 65/118 (55%), Positives = 86/118 (72%)

Query: 6   TRRYRPTKNYLEHIPPLDINKFETEIMRKDFERIQQRLPMEPLSMIRYKLPQPPTGKMSD 65
           TRRYRPTKNYL ++   D + FET+IMR +FER+  R P+E LSM RY+LP P +G+ +D
Sbjct: 40  TRRYRPTKNYLSYLTAPDYSAFETDIMRNEFERLAARQPIELLSMKRYELPAPSSGQKND 99

Query: 66  IAAWTECVENSMSQLEHQSTRIVNLQLMLEYGPETWKEYLQTLVNCVSQAQSKLIQLR 123
           I AW ECV NSM+QLEHQ+ RI NL+LM ++G   WK Y + LV+ +  AQ +L +LR
Sbjct: 100 ITAWQECVNNSMAQLEHQAVRIENLELMSQHGCNAWKVYNENLVHMIEHAQKELQKLR 157

Involved in mRNA splicing.

Homo sapiens (taxid: 9606)

>sp|Q5RAX7|SPF27_PONAB Pre-mRNA-splicing factor SPF27 OS=Pongo abelii GN=BCAS2 PE=2 SV=1

 Score =  140 bits (352), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 67/119 (56%), Positives = 87/119 (73%), Gaps = 1/119 (0%)

Query: 6   TRRYRPTKNYLEHIPPLDINKFETEIMRKDFERIQQRLPMEPLSMIRYKLPQPPTG-KMS 64
           TRRYRPTKNYL ++   D + FET+IMR +FER+  R P+E LSM RY+LP PP+G K +
Sbjct: 40  TRRYRPTKNYLSYLTAPDYSAFETDIMRNEFERLAARQPIELLSMKRYELPAPPSGQKKN 99

Query: 65  DIAAWTECVENSMSQLEHQSTRIVNLQLMLEYGPETWKEYLQTLVNCVSQAQSKLIQLR 123
           DI AW ECV NSM+QLEHQ+ RI NL+LM ++G   WK Y + LV+ +  AQ +L +LR
Sbjct: 100 DITAWQECVNNSMAQLEHQAVRIENLELMSQHGCNAWKVYNENLVHMIEHAQKELQKLR 158

Involved in mRNA splicing.

Pongo abelii (taxid: 9601)

>sp|Q5RKQ0|SPF27_DANRE Pre-mRNA-splicing factor SPF27 OS=Danio rerio GN=bcas2 PE=2 SV=1

 Score =  137 bits (346), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 63/118 (53%), Positives = 82/118 (69%)

Query: 6   TRRYRPTKNYLEHIPPLDINKFETEIMRKDFERIQQRLPMEPLSMIRYKLPQPPTGKMSD 65
           TRRYRPTKNYL ++P  D + FETEIMR +FER+  R PME LSM RY+LP P +G+ +D
Sbjct: 40  TRRYRPTKNYLSYLPTPDFSAFETEIMRNEFERLAARQPMELLSMKRYELPAPSSGQKND 99

Query: 66  IAAWTECVENSMSQLEHQSTRIVNLQLMLEYGPETWKEYLQTLVNCVSQAQSKLIQLR 123
           + AW +CV NSM+QLEHQ+ RI NL+LM +YG   WK     L   +  +Q +L  +R
Sbjct: 100 MTAWQDCVNNSMAQLEHQAVRIENLELMAQYGTNAWKMSNDNLALMIENSQKELQNVR 157

Involved in mRNA splicing.

Danio rerio (taxid: 7955)

>sp|Q54SG7|SPF27_DICDI Pre-mRNA-splicing factor spf27 OS=Dictyostelium discoideum GN=spf27 PE=3 SV=2

 Score = 62.4 bits (150), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 62/112 (55%), Gaps = 6/112 (5%)

Query: 1   MVEEETRRYRPTKNYLEHIPP-LDINKFETEIMRKDFERIQQRLPMEPLSMIRYKLPQPP 59
           ++ +E   + P  +YL  +P  +DI+    + +  DF+R+++   M+   + RYK+ +P 
Sbjct: 32  LISDEMSTFTPP-DYLAQLPSFIDIDYNNFQFLENDFKRMEKEEKMKEFDIGRYKV-EPT 89

Query: 60  TGKMS---DIAAWTECVENSMSQLEHQSTRIVNLQLMLEYGPETWKEYLQTL 108
           T  +    +   W + + N+ SQLEHQ  R +NL+L+  YG  +WK YL  L
Sbjct: 90  TTMIKQQLNEKQWNDSLNNARSQLEHQDIRKINLELLQRYGGNSWKLYLSDL 141

Involved in mRNA splicing.

Dictyostelium discoideum (taxid: 44689)

>sp|Q949S9|SPF27_ARATH Pre-mRNA-splicing factor SPF27 homolog OS=Arabidopsis thaliana GN=MOS4 PE=1 SV=1

 Score = 59.7 bits (143), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 36/108 (33%), Positives = 63/108 (58%), Gaps = 7/108 (6%)

Query: 1   MVEEETRRY-RPTKNYLEHIPPLDINKFET-EIMRKDFERIQQRLPMEPLSM---IRYKL 55
           +VEEE RR  +   ++L+ +PPL    F+   ++ K++ER++   P  P+ +    RYKL
Sbjct: 52  LVEEEMRRSSKKPADFLKDLPPLPKFDFKNCPVLGKEYERVRAGKP--PVRIDFESRYKL 109

Query: 56  PQPPTGKMSDIAAWTECVENSMSQLEHQSTRIVNLQLMLEYGPETWKE 103
             PP  K +D AAW + ++ +   L+ +   + NL+LM + GPE W++
Sbjct: 110 EMPPANKRNDDAAWKQYLQKNQRSLQQKLIELENLELMSKLGPELWRQ 157

Component of the MAC complex that probably regulates defense responses through transcriptional control and thereby is essential for plant innate immunity. Involved in mRNA splicing.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	123
193718415	214	PREDICTED: pre-mRNA-splicing factor SPF2	1.0	0.574	0.634	3e-45
239791247	214	ACYPI009748 [Acyrthosiphon pisum]	1.0	0.574	0.634	4e-45
383858573	248	PREDICTED: pre-mRNA-splicing factor SPF2	1.0	0.495	0.699	9e-45
239792645	203	ACYPI003266 [Acyrthosiphon pisum]	0.991	0.600	0.631	1e-44
242014672	215	conserved hypothetical protein [Pediculu	1.0	0.572	0.691	5e-44
340725547	247	PREDICTED: pre-mRNA-splicing factor SPF2	1.0	0.497	0.691	8e-44
380024677	249	PREDICTED: pre-mRNA-splicing factor SPF2	1.0	0.493	0.682	4e-43
48098489	251	PREDICTED: pre-mRNA-splicing factor SPF2	1.0	0.490	0.682	5e-43
307182752	244	Pre-mRNA-splicing factor SPF27 [Camponot	1.0	0.504	0.650	3e-42
346470625	262	hypothetical protein [Amblyomma maculatu	1.0	0.469	0.634	4e-42

>gi|193718415|ref|XP_001946421.1| PREDICTED: pre-mRNA-splicing factor SPF27-like [Acyrthosiphon pisum] gi|328723378|ref|XP_003247827.1| PREDICTED: pre-mRNA-splicing factor SPF27-like [Acyrthosiphon pisum]

 Score =  185 bits (469), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 78/123 (63%), Positives = 106/123 (86%)

Query: 1   MVEEETRRYRPTKNYLEHIPPLDINKFETEIMRKDFERIQQRLPMEPLSMIRYKLPQPPT 60
           MVE+E RRYRP+KNYLEH+PPL+++ FETE+MR +F+R+QQRLPME +SM RY+LP PP 
Sbjct: 29  MVEDEKRRYRPSKNYLEHLPPLNVSAFETEMMRTEFDRLQQRLPMETMSMKRYELPPPPA 88

Query: 61  GKMSDIAAWTECVENSMSQLEHQSTRIVNLQLMLEYGPETWKEYLQTLVNCVSQAQSKLI 120
           GK++D++AW EC+ENSM+QLEHQ+TRI NL+LM +YG E WK YL+ LV CV+ AQ+++ 
Sbjct: 89  GKLTDMSAWNECLENSMAQLEHQATRITNLELMTDYGTEAWKSYLEVLVKCVAAAQTQVA 148

Query: 121 QLR 123
           +L+
Sbjct: 149 KLK 151

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|239791247|dbj|BAH72116.1| ACYPI009748 [Acyrthosiphon pisum]

 Score =  185 bits (469), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 78/123 (63%), Positives = 106/123 (86%)

Query: 1   MVEEETRRYRPTKNYLEHIPPLDINKFETEIMRKDFERIQQRLPMEPLSMIRYKLPQPPT 60
           MVE+E RRYRP+KNYLEH+PPL+++ FETE+MR +F+R+QQRLPME +SM RY+LP PP 
Sbjct: 29  MVEDEKRRYRPSKNYLEHLPPLNVSAFETEMMRTEFDRLQQRLPMETMSMKRYELPPPPA 88

Query: 61  GKMSDIAAWTECVENSMSQLEHQSTRIVNLQLMLEYGPETWKEYLQTLVNCVSQAQSKLI 120
           GK++D++AW EC+ENSM+QLEHQ+TRI NL+LM +YG E WK YL+ LV CV+ AQ+++ 
Sbjct: 89  GKLTDMSAWNECLENSMAQLEHQATRITNLELMTDYGTEAWKSYLEVLVKCVAAAQTQVA 148

Query: 121 QLR 123
           +L+
Sbjct: 149 KLK 151

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383858573|ref|XP_003704775.1| PREDICTED: pre-mRNA-splicing factor SPF27-like [Megachile rotundata]

 Score =  184 bits (466), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 86/123 (69%), Positives = 102/123 (82%)

Query: 1   MVEEETRRYRPTKNYLEHIPPLDINKFETEIMRKDFERIQQRLPMEPLSMIRYKLPQPPT 60
           MVEEETRRYRPTKNYLEH+PPL+I  FET++M+ +FER+Q RLPME LSM RY+LP PP 
Sbjct: 29  MVEEETRRYRPTKNYLEHLPPLNITAFETDVMKHEFERMQNRLPMEVLSMKRYELPPPPP 88

Query: 61  GKMSDIAAWTECVENSMSQLEHQSTRIVNLQLMLEYGPETWKEYLQTLVNCVSQAQSKLI 120
           GKM+D+AAW E VENS +QLEHQ+TRI NL+LM+EYG E WK YL+ LV  VSQAQ +L 
Sbjct: 89  GKMNDLAAWNESVENSSAQLEHQATRICNLELMMEYGCEAWKSYLEILVQLVSQAQKQLQ 148

Query: 121 QLR 123
            LR
Sbjct: 149 ALR 151

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|239792645|dbj|BAH72643.1| ACYPI003266 [Acyrthosiphon pisum]

 Score =  183 bits (465), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 77/122 (63%), Positives = 104/122 (85%)

Query: 1   MVEEETRRYRPTKNYLEHIPPLDINKFETEIMRKDFERIQQRLPMEPLSMIRYKLPQPPT 60
           MVE+E RRYRP+KNYLEH+PPL+++ FETE+MR +F+R+QQRLPME +SM RY+LP PP 
Sbjct: 29  MVEDEKRRYRPSKNYLEHLPPLNVSAFETEMMRTEFDRLQQRLPMETMSMKRYELPPPPA 88

Query: 61  GKMSDIAAWTECVENSMSQLEHQSTRIVNLQLMLEYGPETWKEYLQTLVNCVSQAQSKLI 120
           GK++D++AW EC+ENSM+QLEHQ+TRI NL+LM +YG E WK YL+ LV CV+ AQ+++ 
Sbjct: 89  GKLTDMSAWNECLENSMAQLEHQATRITNLELMTDYGTEAWKSYLEVLVKCVAAAQTQVA 148

Query: 121 QL 122
           + 
Sbjct: 149 KF 150

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242014672|ref|XP_002428009.1| conserved hypothetical protein [Pediculus humanus corporis] gi|212512528|gb|EEB15271.1| conserved hypothetical protein [Pediculus humanus corporis]

 Score =  181 bits (459), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 85/123 (69%), Positives = 104/123 (84%)

Query: 1   MVEEETRRYRPTKNYLEHIPPLDINKFETEIMRKDFERIQQRLPMEPLSMIRYKLPQPPT 60
           MVEEETRRYRPTKNYLEH+PPL++  FET+IMR + ER+QQRLPME LSM RY+LP PP 
Sbjct: 31  MVEEETRRYRPTKNYLEHLPPLNLTSFETKIMRNENERMQQRLPMEVLSMRRYELPLPPP 90

Query: 61  GKMSDIAAWTECVENSMSQLEHQSTRIVNLQLMLEYGPETWKEYLQTLVNCVSQAQSKLI 120
           GK++D++AW ECV+NS+SQLEHQ+TR+ NL+LMLEYG E W+ YL+ LVN VS AQ KL 
Sbjct: 91  GKLTDMSAWAECVDNSLSQLEHQATRVDNLELMLEYGCEAWRSYLEFLVNEVSCAQKKLQ 150

Query: 121 QLR 123
            +R
Sbjct: 151 DIR 153

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340725547|ref|XP_003401130.1| PREDICTED: pre-mRNA-splicing factor SPF27-like [Bombus terrestris] gi|350415273|ref|XP_003490588.1| PREDICTED: pre-mRNA-splicing factor SPF27-like [Bombus impatiens]

 Score =  180 bits (457), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 85/123 (69%), Positives = 101/123 (82%)

Query: 1   MVEEETRRYRPTKNYLEHIPPLDINKFETEIMRKDFERIQQRLPMEPLSMIRYKLPQPPT 60
           MVEEETRRYRPTKNYLEH+P L+I  FETE+M+ +FER+Q RLPME LSM RY+LP PP 
Sbjct: 29  MVEEETRRYRPTKNYLEHLPSLNITAFETEVMKHEFERMQNRLPMEVLSMKRYELPPPPP 88

Query: 61  GKMSDIAAWTECVENSMSQLEHQSTRIVNLQLMLEYGPETWKEYLQTLVNCVSQAQSKLI 120
           GKM+D+AAW E V+NS +QLEHQ+TRI NL+LM+EYG E WK YL+ LV  VSQAQ +L 
Sbjct: 89  GKMNDLAAWNESVKNSSAQLEHQATRICNLELMMEYGCEAWKSYLEVLVQLVSQAQKQLQ 148

Query: 121 QLR 123
            LR
Sbjct: 149 ALR 151

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380024677|ref|XP_003696119.1| PREDICTED: pre-mRNA-splicing factor SPF27-like [Apis florea]

 Score =  178 bits (451), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 84/123 (68%), Positives = 100/123 (81%)

Query: 1   MVEEETRRYRPTKNYLEHIPPLDINKFETEIMRKDFERIQQRLPMEPLSMIRYKLPQPPT 60
           MVEEETRRYRPTKNYLEH+  L+I  FETE+M+ +FER+Q RLPME LSM RY+LP PP 
Sbjct: 29  MVEEETRRYRPTKNYLEHLASLNITAFETEVMKHEFERMQNRLPMEVLSMKRYELPPPPP 88

Query: 61  GKMSDIAAWTECVENSMSQLEHQSTRIVNLQLMLEYGPETWKEYLQTLVNCVSQAQSKLI 120
           GKM+D+AAW E VENS +QLEHQ+TRI NL+LM+EYG E WK YL+ LV  V+QAQ +L 
Sbjct: 89  GKMNDLAAWNESVENSSAQLEHQATRICNLELMMEYGCEAWKSYLEILVQLVNQAQKQLQ 148

Query: 121 QLR 123
            LR
Sbjct: 149 ALR 151

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|48098489|ref|XP_392072.1| PREDICTED: pre-mRNA-splicing factor SPF27 [Apis mellifera]

 Score =  177 bits (450), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 84/123 (68%), Positives = 100/123 (81%)

Query: 1   MVEEETRRYRPTKNYLEHIPPLDINKFETEIMRKDFERIQQRLPMEPLSMIRYKLPQPPT 60
           MVEEETRRYRPTKNYLEH+  L+I  FETE+M+ +FER+Q RLPME LSM RY+LP PP 
Sbjct: 29  MVEEETRRYRPTKNYLEHLTSLNITAFETEVMKHEFERMQNRLPMEVLSMKRYELPPPPP 88

Query: 61  GKMSDIAAWTECVENSMSQLEHQSTRIVNLQLMLEYGPETWKEYLQTLVNCVSQAQSKLI 120
           GKM+D+AAW E VENS +QLEHQ+TRI NL+LM+EYG E WK YL+ LV  V+QAQ +L 
Sbjct: 89  GKMNDLAAWNESVENSSAQLEHQATRICNLELMMEYGCEAWKSYLEILVQLVNQAQKQLQ 148

Query: 121 QLR 123
            LR
Sbjct: 149 ALR 151

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307182752|gb|EFN69876.1| Pre-mRNA-splicing factor SPF27 [Camponotus floridanus]

 Score =  175 bits (444), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 80/123 (65%), Positives = 100/123 (81%)

Query: 1   MVEEETRRYRPTKNYLEHIPPLDINKFETEIMRKDFERIQQRLPMEPLSMIRYKLPQPPT 60
           MV+EETRRYRPTKNYLEH+ PL+I  FETE+M+ +FER+Q RLPME LSM RY+LP PP+
Sbjct: 29  MVDEETRRYRPTKNYLEHLQPLNITAFETEVMKHEFERMQNRLPMEVLSMKRYELPPPPS 88

Query: 61  GKMSDIAAWTECVENSMSQLEHQSTRIVNLQLMLEYGPETWKEYLQTLVNCVSQAQSKLI 120
           GK++D+AAW E V+NS +QLEHQ+TRI NL+LM++YG E WK YL+ LV  V Q Q +L 
Sbjct: 89  GKLNDLAAWNESVQNSSAQLEHQATRICNLELMMDYGCEAWKSYLEVLVQLVGQGQKQLQ 148

Query: 121 QLR 123
            LR
Sbjct: 149 VLR 151

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|346470625|gb|AEO35157.1| hypothetical protein [Amblyomma maculatum]

 Score =  175 bits (443), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 78/123 (63%), Positives = 98/123 (79%)

Query: 1   MVEEETRRYRPTKNYLEHIPPLDINKFETEIMRKDFERIQQRLPMEPLSMIRYKLPQPPT 60
           MVEEETRRYRPTKNYLEH+P L +++FE+EIM+ +FER+Q RLPME +SM RY+LPQPP 
Sbjct: 29  MVEEETRRYRPTKNYLEHLPQLSLHQFESEIMKTEFERLQSRLPMEMMSMKRYELPQPPA 88

Query: 61  GKMSDIAAWTECVENSMSQLEHQSTRIVNLQLMLEYGPETWKEYLQTLVNCVSQAQSKLI 120
           GK +D+A+W+ECV+NS +QLEHQ+TRI NL+LM  YG E WK Y   LV  + Q Q +L 
Sbjct: 89  GKTTDVASWSECVDNSSAQLEHQATRIANLELMARYGAEAWKAYNAALVRMLHQLQRQLQ 148

Query: 121 QLR 123
            LR
Sbjct: 149 DLR 151

Source: Amblyomma maculatum

Species: Amblyomma maculatum

Genus: Amblyomma

Family: Ixodidae

Order: Ixodida

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	123
FB|FBgn0039558	278	CG4980 [Drosophila melanogaste	1.0	0.442	0.593	1.7e-36
UNIPROTKB|E1BTS4	225	BCAS2 "Uncharacterized protein	1.0	0.546	0.585	2.4e-35
UNIPROTKB|Q5RAX7	226	BCAS2 "Pre-mRNA-splicing facto	1.0	0.544	0.572	4.6e-34
UNIPROTKB|G3N330	218	G3N330 "Uncharacterized protei	1.0	0.564	0.560	9.5e-34
UNIPROTKB|Q5E9D4	225	BCAS2 "Breast carcinoma amplif	1.0	0.546	0.560	9.5e-34
UNIPROTKB|E2RL57	225	BCAS2 "Uncharacterized protein	1.0	0.546	0.560	9.5e-34
UNIPROTKB|O75934	225	BCAS2 "Pre-mRNA-splicing facto	1.0	0.546	0.560	9.5e-34
UNIPROTKB|F1RPK5	228	F1RPK5 "Uncharacterized protei	1.0	0.539	0.560	9.5e-34
UNIPROTKB|I6L631	225	BCAS2 "Uncharacterized protein	1.0	0.546	0.560	9.5e-34
MGI|MGI:1915433	225	Bcas2 "breast carcinoma amplif	1.0	0.546	0.560	9.5e-34

FB|FBgn0039558 CG4980 [Drosophila melanogaster (taxid:7227)]

 Score = 393 (143.4 bits), Expect = 1.7e-36, P = 1.7e-36
 Identities = 73/123 (59%), Positives = 94/123 (76%)

Query:     1 MVEEETRRYRPTKNYLEHIPPLDINKFETEIMRKDFERIQQRLPMEPLSMIRYKLPQPPT 60
             MVEEE RRYRPTKNYL+H+P    + FET +M  +FERIQ RLPME LSM RY+LP PP+
Sbjct:    29 MVEEECRRYRPTKNYLDHLPLPASSPFETPLMANEFERIQNRLPMETLSMKRYELPPPPS 88

Query:    61 GKMSDIAAWTECVENSMSQLEHQSTRIVNLQLMLEYGPETWKEYLQTLVNCVSQAQSKLI 120
             GK+S+++AW E +ENSM+QLEHQ  R +NL+LML+YG E WK YL+      ++AQ +L 
Sbjct:    89 GKLSEVSAWQEAIENSMAQLEHQWVRSLNLELMLDYGTEAWKSYLEVFTAMQAKAQLQLQ 148

Query:   121 QLR 123
             QL+
Sbjct:   149 QLK 151

GO:0005681 "spliceosomal complex" evidence=ISS

GO:0006397 "mRNA processing" evidence=IEA

GO:0071011 "precatalytic spliceosome" evidence=IDA

GO:0071013 "catalytic step 2 spliceosome" evidence=IDA

GO:0000398 "mRNA splicing, via spliceosome" evidence=IC

UNIPROTKB|E1BTS4 BCAS2 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 382 (139.5 bits), Expect = 2.4e-35, P = 2.4e-35
 Identities = 72/123 (58%), Positives = 93/123 (75%)

Query:     1 MVEEETRRYRPTKNYLEHIPPLDINKFETEIMRKDFERIQQRLPMEPLSMIRYKLPQPPT 60
             +VEEETRRYRPTKNYL ++P  D + FETEIMR +FER+  R P+E LSM RY+LP P +
Sbjct:    35 LVEEETRRYRPTKNYLSYLPAHDCSAFETEIMRNEFERLAARQPLELLSMKRYELPAPSS 94

Query:    61 GKMSDIAAWTECVENSMSQLEHQSTRIVNLQLMLEYGPETWKEYLQTLVNCVSQAQSKLI 120
             G+ +DI AW ECV NSM+QLEHQ+ RI NL+LM ++G   WK Y + LV+ + QAQ +L 
Sbjct:    95 GQKNDITAWQECVNNSMAQLEHQAVRIENLELMSQHGCNAWKVYNEHLVHMIEQAQKELQ 154

Query:   121 QLR 123
             +LR
Sbjct:   155 KLR 157

GO:0006397 "mRNA processing" evidence=IEA

GO:0005681 "spliceosomal complex" evidence=IEA

UNIPROTKB|Q5RAX7 BCAS2 "Pre-mRNA-splicing factor SPF27" [Pongo abelii (taxid:9601)]

 Score = 370 (135.3 bits), Expect = 4.6e-34, P = 4.6e-34
 Identities = 71/124 (57%), Positives = 92/124 (74%)

Query:     1 MVEEETRRYRPTKNYLEHIPPLDINKFETEIMRKDFERIQQRLPMEPLSMIRYKLPQPPT 60
             +VEEETRRYRPTKNYL ++   D + FET+IMR +FER+  R P+E LSM RY+LP PP+
Sbjct:    35 LVEEETRRYRPTKNYLSYLTAPDYSAFETDIMRNEFERLAARQPIELLSMKRYELPAPPS 94

Query:    61 G-KMSDIAAWTECVENSMSQLEHQSTRIVNLQLMLEYGPETWKEYLQTLVNCVSQAQSKL 119
             G K +DI AW ECV NSM+QLEHQ+ RI NL+LM ++G   WK Y + LV+ +  AQ +L
Sbjct:    95 GQKKNDITAWQECVNNSMAQLEHQAVRIENLELMSQHGCNAWKVYNENLVHMIEHAQKEL 154

Query:   120 IQLR 123
              +LR
Sbjct:   155 QKLR 158

GO:0000398 "mRNA splicing, via spliceosome" evidence=ISS

GO:0000974 "Prp19 complex" evidence=ISS

UNIPROTKB|G3N330 G3N330 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 367 (134.2 bits), Expect = 9.5e-34, P = 9.5e-34
 Identities = 69/123 (56%), Positives = 91/123 (73%)

Query:     1 MVEEETRRYRPTKNYLEHIPPLDINKFETEIMRKDFERIQQRLPMEPLSMIRYKLPQPPT 60
             +VEEETRRYRPTKNYL ++   D + FET+IMR +FER+  R P+E LSM RY+LP P +
Sbjct:    35 LVEEETRRYRPTKNYLSYLTAPDYSAFETDIMRNEFERLAARQPIELLSMKRYELPAPSS 94

Query:    61 GKMSDIAAWTECVENSMSQLEHQSTRIVNLQLMLEYGPETWKEYLQTLVNCVSQAQSKLI 120
             G+ +DI AW ECV NSM+QLEHQ+ RI NL+LM ++G   WK Y + LV+ +  AQ +L 
Sbjct:    95 GQKNDITAWQECVNNSMAQLEHQAVRIENLELMSQHGCNAWKVYNENLVHMIEHAQKELQ 154

Query:   121 QLR 123
             +LR
Sbjct:   155 KLR 157

GO:0006397 "mRNA processing" evidence=IEA

UNIPROTKB|Q5E9D4 BCAS2 "Breast carcinoma amplified sequence 2" [Bos taurus (taxid:9913)]

 Score = 367 (134.2 bits), Expect = 9.5e-34, P = 9.5e-34
 Identities = 69/123 (56%), Positives = 91/123 (73%)

Query:     1 MVEEETRRYRPTKNYLEHIPPLDINKFETEIMRKDFERIQQRLPMEPLSMIRYKLPQPPT 60
             +VEEETRRYRPTKNYL ++   D + FET+IMR +FER+  R P+E LSM RY+LP P +
Sbjct:    35 LVEEETRRYRPTKNYLSYLTAPDYSAFETDIMRNEFERLAARQPIELLSMKRYELPAPSS 94

Query:    61 GKMSDIAAWTECVENSMSQLEHQSTRIVNLQLMLEYGPETWKEYLQTLVNCVSQAQSKLI 120
             G+ +DI AW ECV NSM+QLEHQ+ RI NL+LM ++G   WK Y + LV+ +  AQ +L 
Sbjct:    95 GQKNDITAWQECVNNSMAQLEHQAVRIENLELMSQHGCNAWKVYNENLVHMIEHAQKELQ 154

Query:   121 QLR 123
             +LR
Sbjct:   155 KLR 157

GO:0006397 "mRNA processing" evidence=IEA

UNIPROTKB|E2RL57 BCAS2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 367 (134.2 bits), Expect = 9.5e-34, P = 9.5e-34
 Identities = 69/123 (56%), Positives = 91/123 (73%)

Query:     1 MVEEETRRYRPTKNYLEHIPPLDINKFETEIMRKDFERIQQRLPMEPLSMIRYKLPQPPT 60
             +VEEETRRYRPTKNYL ++   D + FET+IMR +FER+  R P+E LSM RY+LP P +
Sbjct:    35 LVEEETRRYRPTKNYLSYLTAPDYSAFETDIMRNEFERLAARQPIELLSMKRYELPAPSS 94

Query:    61 GKMSDIAAWTECVENSMSQLEHQSTRIVNLQLMLEYGPETWKEYLQTLVNCVSQAQSKLI 120
             G+ +DI AW ECV NSM+QLEHQ+ RI NL+LM ++G   WK Y + LV+ +  AQ +L 
Sbjct:    95 GQKNDITAWQECVNNSMAQLEHQAVRIENLELMSQHGCNAWKVYNENLVHMIEHAQKELQ 154

Query:   121 QLR 123
             +LR
Sbjct:   155 KLR 157

GO:0005681 "spliceosomal complex" evidence=IEA

GO:0006397 "mRNA processing" evidence=IEA

UNIPROTKB|O75934 BCAS2 "Pre-mRNA-splicing factor SPF27" [Homo sapiens (taxid:9606)]

 Score = 367 (134.2 bits), Expect = 9.5e-34, P = 9.5e-34
 Identities = 69/123 (56%), Positives = 91/123 (73%)

Query:     1 MVEEETRRYRPTKNYLEHIPPLDINKFETEIMRKDFERIQQRLPMEPLSMIRYKLPQPPT 60
             +VEEETRRYRPTKNYL ++   D + FET+IMR +FER+  R P+E LSM RY+LP P +
Sbjct:    35 LVEEETRRYRPTKNYLSYLTAPDYSAFETDIMRNEFERLAARQPIELLSMKRYELPAPSS 94

Query:    61 GKMSDIAAWTECVENSMSQLEHQSTRIVNLQLMLEYGPETWKEYLQTLVNCVSQAQSKLI 120
             G+ +DI AW ECV NSM+QLEHQ+ RI NL+LM ++G   WK Y + LV+ +  AQ +L 
Sbjct:    95 GQKNDITAWQECVNNSMAQLEHQAVRIENLELMSQHGCNAWKVYNENLVHMIEHAQKELQ 154

Query:   121 QLR 123
             +LR
Sbjct:   155 KLR 157

GO:0006397 "mRNA processing" evidence=IEA

GO:0005730 "nucleolus" evidence=IEA

GO:0000375 "RNA splicing, via transesterification reactions" evidence=TAS

GO:0008380 "RNA splicing" evidence=TAS

GO:0005515 "protein binding" evidence=IPI

GO:0005681 "spliceosomal complex" evidence=IDA

UNIPROTKB|F1RPK5 F1RPK5 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 367 (134.2 bits), Expect = 9.5e-34, P = 9.5e-34
 Identities = 69/123 (56%), Positives = 91/123 (73%)

Query:     1 MVEEETRRYRPTKNYLEHIPPLDINKFETEIMRKDFERIQQRLPMEPLSMIRYKLPQPPT 60
             +VEEETRRYRPTKNYL ++   D + FET+IMR +FER+  R P+E LSM RY+LP P +
Sbjct:    36 LVEEETRRYRPTKNYLSYLTAPDYSAFETDIMRNEFERLAARQPIELLSMKRYELPAPSS 95

Query:    61 GKMSDIAAWTECVENSMSQLEHQSTRIVNLQLMLEYGPETWKEYLQTLVNCVSQAQSKLI 120
             G+ +DI AW ECV NSM+QLEHQ+ RI NL+LM ++G   WK Y + LV+ +  AQ +L 
Sbjct:    96 GQKNDITAWQECVNNSMAQLEHQAVRIENLELMSQHGCNAWKVYNENLVHMIEHAQKELQ 155

Query:   121 QLR 123
             +LR
Sbjct:   156 KLR 158

GO:0006397 "mRNA processing" evidence=IEA

UNIPROTKB|I6L631 BCAS2 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 367 (134.2 bits), Expect = 9.5e-34, P = 9.5e-34
 Identities = 69/123 (56%), Positives = 91/123 (73%)

Query:     1 MVEEETRRYRPTKNYLEHIPPLDINKFETEIMRKDFERIQQRLPMEPLSMIRYKLPQPPT 60
             +VEEETRRYRPTKNYL ++   D + FET+IMR +FER+  R P+E LSM RY+LP P +
Sbjct:    35 LVEEETRRYRPTKNYLSYLTAPDYSAFETDIMRNEFERLAARQPIELLSMKRYELPAPSS 94

Query:    61 GKMSDIAAWTECVENSMSQLEHQSTRIVNLQLMLEYGPETWKEYLQTLVNCVSQAQSKLI 120
             G+ +DI AW ECV NSM+QLEHQ+ RI NL+LM ++G   WK Y + LV+ +  AQ +L 
Sbjct:    95 GQKNDITAWQECVNNSMAQLEHQAVRIENLELMSQHGCNAWKVYNENLVHMIEHAQKELQ 154

Query:   121 QLR 123
             +LR
Sbjct:   155 KLR 157

GO:0006397 "mRNA processing" evidence=IEA

MGI|MGI:1915433 Bcas2 "breast carcinoma amplified sequence 2" [Mus musculus (taxid:10090)]

 Score = 367 (134.2 bits), Expect = 9.5e-34, P = 9.5e-34
 Identities = 69/123 (56%), Positives = 91/123 (73%)

Query:     1 MVEEETRRYRPTKNYLEHIPPLDINKFETEIMRKDFERIQQRLPMEPLSMIRYKLPQPPT 60
             +VEEETRRYRPTKNYL ++   D + FET+IMR +FER+  R P+E LSM RY+LP P +
Sbjct:    35 LVEEETRRYRPTKNYLSYLTAPDYSAFETDIMRNEFERLAARQPIELLSMKRYELPAPSS 94

Query:    61 GKMSDIAAWTECVENSMSQLEHQSTRIVNLQLMLEYGPETWKEYLQTLVNCVSQAQSKLI 120
             G+ +DI AW ECV NSM+QLEHQ+ RI NL+LM ++G   WK Y + LV+ +  AQ +L 
Sbjct:    95 GQKNDITAWQECVNNSMAQLEHQAVRIENLELMSQHGCNAWKVYNENLVHMIEHAQKELQ 154

Query:   121 QLR 123
             +LR
Sbjct:   155 KLR 157

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=IEA

GO:0005681 "spliceosomal complex" evidence=ISO

GO:0006397 "mRNA processing" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0008380 "RNA splicing" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q5RAX7	SPF27_PONAB	No assigned EC number	0.5630	0.9593	0.5221	yes	N/A
Q5RKQ0	SPF27_DANRE	No assigned EC number	0.5338	0.9593	0.5244	yes	N/A
O75934	SPF27_HUMAN	No assigned EC number	0.5508	0.9593	0.5244	yes	N/A
Q9D287	SPF27_MOUSE	No assigned EC number	0.5508	0.9593	0.5244	yes	N/A
Q6PBE2	SPF27_XENTR	No assigned EC number	0.5593	0.9593	0.5291	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	123
pfam05700	221	pfam05700, BCAS2, Breast carcinoma amplified seque	1e-39

>gnl|CDD|218703 pfam05700, BCAS2, Breast carcinoma amplified sequence 2 (BCAS2)

 Score =  131 bits (331), Expect = 1e-39
 Identities = 59/126 (46%), Positives = 85/126 (67%), Gaps = 3/126 (2%)

Query: 1   MVEEETRRYRPTKNYLEHIPPL---DINKFETEIMRKDFERIQQRLPMEPLSMIRYKLPQ 57
           +VEEE +RYRPTKNYLEH+P L   D + FET ++R +FER+Q   PM+ L M RY+LP+
Sbjct: 31  LVEEEMKRYRPTKNYLEHLPSLQGPDYSLFETPLLRNEFERVQAGQPMKGLDMSRYELPE 90

Query: 58  PPTGKMSDIAAWTECVENSMSQLEHQSTRIVNLQLMLEYGPETWKEYLQTLVNCVSQAQS 117
           PP GK +D  AW   + N+ +QLEHQ  RI+NL+L+ +YG   W  Y + L   + + + 
Sbjct: 91  PPAGKANDDKAWKAALNNARAQLEHQLIRIINLELLSKYGKNAWLVYNEQLEALLKRLEK 150

Query: 118 KLIQLR 123
           +L +L+
Sbjct: 151 ELAELK 156

This family consists of several eukaryotic sequences of unknown function. The mammalian members of this family are annotated as breast carcinoma amplified sequence 2 (BCAS2) proteins. BCAS2 is a putative spliceosome associated protein. Length = 221

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	123
KOG3096|consensus	225		100.0
PF05700	221	BCAS2: Breast carcinoma amplified sequence 2 (BCAS	100.0

>KOG3096|consensus

Probab=100.00  E-value=2e-44  Score=276.77  Aligned_cols=123  Identities=51%  Similarity=0.828  Sum_probs=120.9

Q ss_pred             ChHhhhcccCCCCCCcCCCCCCCCCcccchHHHHHHHHHhhCCCCCcCcccccCCCCCCCCCcccHHHHHHHHHHHHHHH
Q psy12404          1 MVEEETRRYRPTKNYLEHIPPLDINKFETEIMRKDFERIQQRLPMEPLSMIRYKLPQPPTGKMSDIAAWTECVENSMSQL   80 (123)
Q Consensus         1 LIeeEm~~~~p~~~yL~~LP~p~~~~f~tp~l~~E~eRv~~~~p~~~lD~sRY~l~~pp~~~~~d~~aW~~al~na~~ql   80 (123)
                      |||+||+||+|+++|+.++|.|++++|.||+|.+||+|+.++.||..+|||||++|.||+++.+|..+|+++|.|+++|+
T Consensus        29 lVEeE~rr~rptknyl~~lp~p~~s~f~t~~m~ne~er~~~k~pm~~l~msRyelp~Ppagkr~d~~aW~e~l~ns~aql  108 (225)
T KOG3096|consen   29 LVEEECRRYRPTKNYLDHLPLPDYSAFLTDRMENEFERAGKKEPMEALDMSRYELPAPPAGKRNDDAAWQESLLNSMAQL  108 (225)
T ss_pred             HHHHHHHhhcchhhhhhcCCCcccchhhhhHHHHHHHHHhccCcchhhhHHhhcCCCCCcCccchHHHHHHHHHHHHHHH
Confidence            69999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHHHhcC
Q psy12404         81 EHQSTRIVNLQLMLEYGPETWKEYLQTLVNCVSQAQSKLIQLR  123 (123)
Q Consensus        81 ehq~~R~~NLeLl~~yG~naW~~~n~~Le~~l~~~ek~l~~~k  123 (123)
                      |||.+|++|||||++||+++|+.+|+.||+++.++|++|+++|
T Consensus       109 Ehq~~r~~NLeLM~k~g~eaw~~~ne~le~~l~~aqkelq~~k  151 (225)
T KOG3096|consen  109 EHQLVRNENLELMSKHGEEAWKQYNEVLEVMLTHAQKELQKTK  151 (225)
T ss_pred             HHHHHHHhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999875

>PF05700 BCAS2: Breast carcinoma amplified sequence 2 (BCAS2); InterPro: IPR008409 This family consists of several eukaryotic sequences of unknown function

Probab=100.00  E-value=2.7e-42  Score=268.22  Aligned_cols=123  Identities=43%  Similarity=0.831  Sum_probs=117.6

Q ss_pred             ChHhhhcccCCCCCCcCCCCC---CCCCcccchHHHHHHHHHhhCCCCCcCcccccCCCCCCCCCcccHHHHHHHHHHHH
Q psy12404          1 MVEEETRRYRPTKNYLEHIPP---LDINKFETEIMRKDFERIQQRLPMEPLSMIRYKLPQPPTGKMSDIAAWTECVENSM   77 (123)
Q Consensus         1 LIeeEm~~~~p~~~yL~~LP~---p~~~~f~tp~l~~E~eRv~~~~p~~~lD~sRY~l~~pp~~~~~d~~aW~~al~na~   77 (123)
                      ||++||++++|+++||+.||+   |+++.|.||+|++||+||++|+||.+|||+||++|+||+++.+|+++|++||+||+
T Consensus        31 lI~eE~~~~~~~~~~l~~lp~~~~~~~~~~~t~~l~~E~~R~~~~~~~~~lD~sRY~l~~p~~~~~~d~~~w~~al~na~  110 (221)
T PF05700_consen   31 LIEEEMRRYRPTKNYLPHLPPPPEPPFSAFETPLLQAELERVASGEPMQGLDMSRYELPPPPSGKSNDVEAWKEALDNAY  110 (221)
T ss_pred             HHHHHHhhcCCCchhHHhCCCCCCCCcccccchhHHHHHHHHHcCCCCCccCHHhcCCCCCCCCCcccHHHHHHHHHHHH
Confidence            799999988899999999998   66667889999999999999999999999999999999999899999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHHHhcC
Q psy12404         78 SQLEHQSTRIVNLQLMLEYGPETWKEYLQTLVNCVSQAQSKLIQLR  123 (123)
Q Consensus        78 ~qlehq~~R~~NLeLl~~yG~naW~~~n~~Le~~l~~~ek~l~~~k  123 (123)
                      ++++||.+|++|||||.+||+|+|++||++|++++++++++|+++|
T Consensus       111 a~lehq~~R~~NLeLl~~~g~naW~~~n~~Le~~~~~le~~l~~~k  156 (221)
T PF05700_consen  111 AQLEHQRLRLENLELLSKYGENAWLIHNEQLEAMLKRLEKELAKLK  156 (221)
T ss_pred             HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999874

The mammalian members of this family are annotated as breast carcinoma amplified sequence 2 (BCAS2) proteins []. BCAS2 is a putative spliceosome associated protein [].

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00