Psyllid ID: psy1246

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-
Protein Sequence
MSACPSSFAEACSGPSPTPANSGLYGNGPSGYTPTEKRPPYGQPENTPPYAPAENRPSYGQSENSPSYGQPENKPSYGQPENRPSYGQPGNGASYGQPENKPSYGQPENKPSYGQPENRPSYGQPENRPSYGQPGNGASYGQPENKPSYGQPENGAKVIMM
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEc
Coil and Loop (DISEMBL)
msacpssfaeacsgpsptpansglygngpsgytptekrppygqpentppyapaenrpsygqsenspsygqpenkpsygqpenrpsygqpgngasygqpenkpsygqpenkpsygqpenrpsygqpenrpsygqpgngasygqpenkpsygqpengakvimm
Flexible Loop (DISEMBL)
MSACPSSFAEACSGPSPTPANSGLYGNGPSGYTPTEKRPPYGQPENTPPYAPAENRPSYGQSENSPSYGQPENKPSYGQPENRPSYGQPGNGASYGQPENKPSYGQPENKPSYGQPENRPSYGQPENRPSYGQPGNGAsygqpenkpsygqpengakvimm
Low Complexity Region (SEG)
MSACPSSFAEACSGPSPTPANSGLYGNGPSGYTPTEKRPPYGQPENTPPYAPAENRPSYGQSENSPSYGQPENKPSYGQPENRPSYGQPGNGASYGQPENKPSYGQPENKPSYGQPENRPSYGQPENRPSYGQPGNGASYGQPENKPSYGQPENGAKVIMM
Disordered region (IsUnstruct)
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Disordered Region (DISOPRED)
*****************************************************************************************************************************************************************
Disordered Region (DISEMBL)
*****************TPANSGLYGNGPSGYTPTEKRPPYGQPENTPPYAPAE*****************************PSYGQPGN*************************************PSYGQPGNGASYGQPENKPSYGQPENGAKVIMM
Disordered Region (DISPRO)
*****************************************************************************************************************************************************************
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSACPSSFAEACSGPSPTPANSGLYGNGPSGYTPTEKRPPYGQPENTPPYAPAENRPSYGQSENSPSYGQPENKPSYGQPENRPSYGQPGNGASYGQPENKPSYGQPENKPSYGQPENRPSYGQPENRPSYGQPGNGASYGQPENKPSYGQPENGAKVIMM
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	161	2.2.26 [Sep-21-2011]
Q9UKF5	820	Disintegrin and metallopr	yes	N/A	0.571	0.112	0.380	8e-09
Q03110	386	Circumsporozoite protein	N/A	N/A	0.621	0.259	0.346	2e-05
P18899	430	Stress protein DDR48 OS=S	yes	N/A	0.739	0.276	0.367	2e-05
P08677	378	Circumsporozoite protein	N/A	N/A	0.621	0.264	0.346	2e-05
P13826	343	Circumsporozoite protein	N/A	N/A	0.621	0.291	0.346	5e-05

>sp|Q9UKF5|ADA29_HUMAN Disintegrin and metalloproteinase domain-containing protein 29 OS=Homo sapiens GN=ADAM29 PE=1 SV=3

 Score = 59.7 bits (143), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 35/92 (38%), Positives = 41/92 (44%)

Query: 43  QPENTPPYAPAENRPSYGQSENSPSYGQPENKPSYGQPENRPSYGQPGNGASYGQPENKP 102
           +P   PP +     PS  Q   +PS   P+  PS  QP   PS  QP    S  QP   P
Sbjct: 724 RPHELPPQSQPWVMPSQSQPPVTPSQSHPQVMPSQSQPPVTPSQSQPRVMPSQSQPPVMP 783

Query: 103 SYGQPENKPSYGQPENRPSYGQPENRPSYGQP 134
           S   P+  PS  QP   PS  QP+  PS  QP
Sbjct: 784 SQSHPQLTPSQSQPPVTPSQRQPQLMPSQSQP 815

May be involved in spermatogenesis and fertilization. Seems to be a non catalytic metalloprotease-like protein.
Homo sapiens (taxid: 9606)

>sp|Q03110|CSP_PLASI Circumsporozoite protein OS=Plasmodium simium GN=CS PE=3 SV=1

 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/101 (34%), Positives = 47/101 (46%), Gaps = 1/101 (0%)

Query: 52  PAENRPSYGQSENSPSYGQPENKPSYGQPENRPSYGQPGNGASYGQPENKPSYGQPENKP 111
           PA +R + GQ     + GQP    + GQP    + GQP    + GQP    + GQP    
Sbjct: 166 PAGDR-AAGQPAGDRAAGQPAGDRADGQPAGDRADGQPAGDRADGQPAGDRAAGQPAGDR 224

Query: 112 SYGQPENRPSYGQPENRPSYGQPGNGASYGQPENKPSYGQP 152
           + GQP    + GQP    + GQP    + GQP    + GQP
Sbjct: 225 AAGQPAGDRAAGQPAGDRAAGQPAGDRAAGQPAGDRAAGQP 265

The circumsporozoite protein is the immunodominant surface antigen on the sporozoite (the infective stage of the malaria parasite that is transmitted from the mosquito to the vertebrate host).

Plasmodium simium (taxid: 5859)

>sp|P18899|DDR48_YEAST Stress protein DDR48 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DDR48 PE=1 SV=4

 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/136 (36%), Positives = 57/136 (41%), Gaps = 17/136 (12%)

Query: 27  NGPSGYTPTEKRPPYGQPENTPPYAPA-ENRPSYGQSENSPSYGQPENKPSYGQP-ENRP 84
           N    Y  +     YG   N   Y  + +N+ SYG S N  SYG   N  SYG   + + 
Sbjct: 252 NNDDSYGSSNNNDSYG-SNNDDSYGSSNKNKSSYGSSSNDDSYGSSNNDDSYGSSNKKKS 310

Query: 85  SYGQPGNGASYGQPENKPSYGQP-ENKPSYGQPENRPSYGQPENRPSYGQ---------P 134
           SYG   N  SYG   N  SYG   + K SYG   N  SYG   N  SYG           
Sbjct: 311 SYGSN-NDDSYG-SNNDDSYGSSNKKKSSYGSS-NNDSYG-SNNDDSYGSSNKKKSSYGS 366

Query: 135 GNGASYGQPENKPSYG 150
            N  SYG   N  SYG
Sbjct: 367 NNDDSYGSSNNNDSYG 382

Dispensable for acquisition of thermotolerance and does not play a significant role in recovery or protection of cells from acute heat shock. May be implicated in one or possibly more pathways of mutagenesis in yeast. Hydrolyzes ATP and GTP yielding ppi.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

>sp|P08677|CSP_PLAVB Circumsporozoite protein OS=Plasmodium vivax (strain Belem) PE=3 SV=2

 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/101 (34%), Positives = 47/101 (46%), Gaps = 1/101 (0%)

Query: 52  PAENRPSYGQSENSPSYGQPENKPSYGQPENRPSYGQPGNGASYGQPENKPSYGQPENKP 111
           PA +R + GQ     + GQP    + GQP    + GQP    + GQP    + GQP    
Sbjct: 166 PAGDR-AAGQPAGDRAAGQPAGDRADGQPAGDRAAGQPAGDRADGQPAGDRAAGQPAGDR 224

Query: 112 SYGQPENRPSYGQPENRPSYGQPGNGASYGQPENKPSYGQP 152
           + GQP    + GQP    + GQP    + GQP    + GQP
Sbjct: 225 ADGQPAGDRAAGQPAGDRAAGQPAGDRAAGQPAGDRAAGQP 265

The circumsporozoite protein is the immunodominant surface antigen on the sporozoite (the infective stage of the malaria parasite that is transmitted from the mosquito to the vertebrate host).

Plasmodium vivax (strain Belem) (taxid: 31273)

>sp|P13826|CSP_PLAVS Circumsporozoite protein (Fragment) OS=Plasmodium vivax (strain Salvador I) PE=3 SV=1

 Score = 47.0 bits (110), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 35/101 (34%), Positives = 47/101 (46%), Gaps = 1/101 (0%)

Query: 52  PAENRPSYGQSENSPSYGQPENKPSYGQPENRPSYGQPGNGASYGQPENKPSYGQPENKP 111
           PA +R + GQ     + GQP    + GQP    + GQP    + GQP    + GQP    
Sbjct: 123 PAGDR-ADGQPAGDRADGQPAGDRAAGQPAGDRAAGQPAGDRADGQPAGDRAAGQPAGDR 181

Query: 112 SYGQPENRPSYGQPENRPSYGQPGNGASYGQPENKPSYGQP 152
           + GQP    + GQP    + GQP    + GQP    + GQP
Sbjct: 182 ADGQPAGDRAAGQPAGDRADGQPAGDRAAGQPAGDRAAGQP 222

The circumsporozoite protein is the immunodominant surface antigen on the sporozoite (the infective stage of the malaria parasite that is transmitted from the mosquito to the vertebrate host).

Plasmodium vivax (strain Salvador I) (taxid: 126793)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	161
366993156	560	hypothetical protein NCAS_0D04010 [Naumo	0.782	0.225	0.398	5e-19
156392813	207	predicted protein [Nematostella vectensi	0.788	0.613	0.367	5e-17
125599898	231	hypothetical protein OsJ_23902 [Oryza sa	0.409	0.285	0.326	4e-12
302886798	234	predicted protein [Nectria haematococca	0.472	0.324	0.385	5e-12
218199458	381	hypothetical protein OsI_25696 [Oryza sa	0.509	0.215	0.322	6e-12
374317369	894	putative SAM-dependent methyltransferase	0.664	0.119	0.364	7e-12
70937411	458	hypothetical protein [Plasmodium chabaud	0.763	0.268	0.330	9e-12
115471617	403	Os07g0295400 [Oryza sativa Japonica Grou	0.409	0.163	0.326	9e-11
357111000	401	PREDICTED: uncharacterized protein LOC10	0.571	0.229	0.304	1e-10
154416805	1609	hypothetical protein [Trichomonas vagina	0.577	0.057	0.418	3e-10

>gi|366993156|ref|XP_003676343.1| hypothetical protein NCAS_0D04010 [Naumovozyma castellii CBS 4309] gi|342302209|emb|CCC69982.1| hypothetical protein NCAS_0D04010 [Naumovozyma castellii CBS 4309]

 Score = 99.4 bits (246), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 51/128 (39%), Positives = 61/128 (47%)

Query: 27  NGPSGYTPTEKRPPYGQPENTPPYAPAENRPSYGQSENSPSYGQPENKPSYGQPENRPSY 86
           N    Y  + K+  YG  +NT  Y  + N  SYG S    SYG  +N  SYG   N  SY
Sbjct: 208 NNTDSYGSSNKKSSYGNDDNTDSYGSSNNDDSYGSSNKKSSYGNDDNTDSYGSSNNDDSY 267

Query: 87  GQPGNGASYGQPENKPSYGQPENKPSYGQPENRPSYGQPENRPSYGQPGNGASYGQPENK 146
           G     +SYG  +N  SYG   N  SYG    + SYG  +N  SYG   N  SYG    K
Sbjct: 268 GSSNKKSSYGNDDNTDSYGSSNNDDSYGSSNKKSSYGNDDNTDSYGSSNNNDSYGSSNKK 327

Query: 147 PSYGQPEN 154
            SYG  +N
Sbjct: 328 SSYGNDDN 335

Source: Naumovozyma castellii CBS 4309

Species: Naumovozyma castellii

Genus: Naumovozyma

Family: Saccharomycetaceae

Order: Saccharomycetales

Class: Saccharomycetes

Phylum: Ascomycota

Superkingdom: Eukaryota

>gi|156392813|ref|XP_001636242.1| predicted protein [Nematostella vectensis] gi|156223343|gb|EDO44179.1| predicted protein [Nematostella vectensis]

 Score = 92.4 bits (228), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 47/128 (36%), Positives = 83/128 (64%), Gaps = 1/128 (0%)

Query: 27  NGPSGYTPTEKRPPYGQPENTPPYAPAENRPSYGQSENSPSYGQPENKPSYGQPENRPSY 86
           + PS   P  + P + QP + P +    ++PS+ Q  + PS+ QP ++PS+ QP ++PS+
Sbjct: 5   HQPSFRQPLHQ-PSFRQPLHQPSFRQQFHQPSFRQPLHQPSFRQPLHQPSFRQPLHQPSF 63

Query: 87  GQPGNGASYGQPENKPSYGQPENKPSYGQPENRPSYGQPENRPSYGQPGNGASYGQPENK 146
            QP +  S+ QP ++PS+ Q  ++PS+ QP ++PS+ QP ++PS+ QP +  S+ QP ++
Sbjct: 64  RQPLHQPSFRQPLHQPSFRQQFHQPSFRQPLHQPSFRQPLHQPSFRQPLHQPSFRQPLHQ 123

Query: 147 PSYGQPEN 154
           PS+ QP +
Sbjct: 124 PSFRQPLH 131

Source: Nematostella vectensis

Species: Nematostella vectensis

Genus: Nematostella

Family: Edwardsiidae

Order: Actiniaria

Class: Anthozoa

Phylum: Cnidaria

Superkingdom: Eukaryota

>gi|125599898|gb|EAZ39474.1| hypothetical protein OsJ_23902 [Oryza sativa Japonica Group]

 Score = 76.3 bits (186), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 56/92 (60%)

Query: 59  YGQSENSPSYGQPENKPSYGQPENRPSYGQPGNGASYGQPENKPSYGQPENKPSYGQPEN 118
           +G   +SP +G P   P++G P + P++G P    ++G P + P++G P + PS+G P  
Sbjct: 2   FGTPASSPLFGTPSTTPAFGAPSSTPAFGTPSTNPAFGTPSSTPAFGAPSSTPSFGTPST 61

Query: 119 RPSYGQPENRPSYGQPGNGASYGQPENKPSYG 150
            P++G P + P++G P +  ++G P + P++G
Sbjct: 62  APAFGTPSSTPAFGAPSSTPAFGAPFSTPAFG 93

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302886798|ref|XP_003042288.1| predicted protein [Nectria haematococca mpVI 77-13-4] gi|256723198|gb|EEU36575.1| predicted protein [Nectria haematococca mpVI 77-13-4]

 Score = 75.9 bits (185), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 42/109 (38%), Positives = 52/109 (47%)

Query: 41  YGQPENTPPYAPAENRPSYGQSENSPSYGQPENKPSYGQPENRPSYGQPGNGASYGQPEN 100
           Y  PE  P Y     +PSY   E  P Y  P  KP+Y  PE +P Y  P    +Y  PE 
Sbjct: 64  YKAPEKKPEYKAPVKKPSYKAPEKKPVYKAPAKKPAYKAPEKKPEYKAPVKKPAYKAPEK 123

Query: 101 KPSYGQPENKPSYGQPENRPSYGQPENRPSYGQPGNGASYGQPENKPSY 149
           KP Y  P  KP+Y  PE +P Y  P  +P+Y  P     Y  P  KP++
Sbjct: 124 KPEYKAPAKKPAYKAPEKKPEYKAPVKKPAYKAPEKKPVYKAPAKKPAH 172

Source: Nectria haematococca mpVI 77-13-4

Species: Nectria haematococca

Genus: Fusarium

Family: Nectriaceae

Order: Hypocreales

Class: Sordariomycetes

Phylum: Ascomycota

Superkingdom: Eukaryota

>gi|218199458|gb|EEC81885.1| hypothetical protein OsI_25696 [Oryza sativa Indica Group]

 Score = 75.5 bits (184), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 57/96 (59%)

Query: 59  YGQSENSPSYGQPENKPSYGQPENRPSYGQPGNGASYGQPENKPSYGQPENKPSYGQPEN 118
           +G   +SP +G P   P++G P + P++G P     +G P + P++G P + PS+G P  
Sbjct: 2   FGTPSSSPLFGTPSTTPAFGAPSSTPAFGTPSTTPDFGTPSSTPAFGAPSSTPSFGTPST 61

Query: 119 RPSYGQPENRPSYGQPGNGASYGQPENKPSYGQPEN 154
            P++G P + P++G P +  ++G P + P++G P +
Sbjct: 62  APAFGTPSSTPAFGAPSSTPAFGAPSSTPAFGTPSS 97

Source: Oryza sativa Indica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|374317369|ref|YP_005063797.1| putative SAM-dependent methyltransferase [Sphaerochaeta pleomorpha str. Grapes] gi|359353013|gb|AEV30787.1| putative SAM-dependent methyltransferase [Sphaerochaeta pleomorpha str. Grapes]

 Score = 75.5 bits (184), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 43/118 (36%), Positives = 70/118 (59%), Gaps = 11/118 (9%)

Query: 36  EKRPPYGQPENTPPYA-PAENRPSYGQSENSPSYG-QPENKPSYGQPENRPSYGQPGNGA 93
           ++RP YG  ++ P +    + RPSYG  ++ PS+G   + +PSYG  +++PS+G      
Sbjct: 685 DRRPSYGDRDSKPSFGGDRDRRPSYGDRDSKPSFGGDRDRRPSYGDRDSKPSFG------ 738

Query: 94  SYGQPENKPSYGQPENKPSYGQPENRPSYGQPENRPSYGQPGNGA-SYGQPENKPSYG 150
             G  + +PSYG  ++KPS+G    R  YG  ++RPS+G   +   SYG  ++KPS+G
Sbjct: 739 --GDRDRRPSYGDRDSKPSFGGDRERRPYGDRDSRPSFGGDRDRRPSYGDRDSKPSFG 794

Source: Sphaerochaeta pleomorpha str. Grapes

Species: Sphaerochaeta pleomorpha

Genus: Sphaerochaeta

Family: Spirochaetaceae

Order: Spirochaetales

Class: Spirochaetia

Phylum: Spirochaetes

Superkingdom: Bacteria

>gi|70937411|ref|XP_739517.1| hypothetical protein [Plasmodium chabaudi chabaudi] gi|56516573|emb|CAH78975.1| hypothetical protein PC000007.03.0 [Plasmodium chabaudi chabaudi]

 Score = 75.1 bits (183), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 46/139 (33%), Positives = 54/139 (38%), Gaps = 16/139 (11%)

Query: 33  TPTEKRPPYGQPENTPPYAPAENRPSYGQSENSPSYGQPENKPSYGQP--------ENRP 84
              E +  Y Q EN   YA  E+   Y Q EN   Y Q E+   Y Q         E++ 
Sbjct: 135 IENESKIEYEQIENDREYAQIESDREYEQIENDREYEQIESDIEYAQIESHDEIENESKI 194

Query: 85  SYGQPGNGASYGQPENKPSYGQP--------ENKPSYGQPENRPSYGQPENRPSYGQPGN 136
            Y Q  N   Y Q E+   Y Q         E+K  Y + EN   Y Q EN   Y Q  N
Sbjct: 195 EYEQIENDREYAQIESDIEYEQIESHDEIENESKIEYEENENDREYAQIENDIEYEQIEN 254

Query: 137 GASYGQPENKPSYGQPENG 155
              Y Q EN   Y Q EN 
Sbjct: 255 DIEYAQIENDREYAQIEND 273

Source: Plasmodium chabaudi chabaudi

Species: Plasmodium chabaudi

Genus: Plasmodium

Order: Haemosporida

Class: Aconoidasida

Phylum: Apicomplexa

Superkingdom: Eukaryota

>gi|115471617|ref|NP_001059407.1| Os07g0295400 [Oryza sativa Japonica Group] gi|34394986|dbj|BAC84534.1| unknown protein [Oryza sativa Japonica Group] gi|50509044|dbj|BAD32058.1| unknown protein [Oryza sativa Japonica Group] gi|113610943|dbj|BAF21321.1| Os07g0295400 [Oryza sativa Japonica Group] gi|215765801|dbj|BAG87498.1| unnamed protein product [Oryza sativa Japonica Group]

 Score = 71.6 bits (174), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 56/92 (60%)

Query: 59  YGQSENSPSYGQPENKPSYGQPENRPSYGQPGNGASYGQPENKPSYGQPENKPSYGQPEN 118
           +G   +SP +G P   P++G P + P++G P    ++G P + P++G P + PS+G P  
Sbjct: 2   FGTPASSPLFGTPSTTPAFGAPSSTPAFGTPSTNPAFGTPSSTPAFGAPSSTPSFGTPST 61

Query: 119 RPSYGQPENRPSYGQPGNGASYGQPENKPSYG 150
            P++G P + P++G P +  ++G P + P++G
Sbjct: 62  APAFGTPSSTPAFGAPSSTPAFGAPFSTPAFG 93

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357111000|ref|XP_003557303.1| PREDICTED: uncharacterized protein LOC100830854 [Brachypodium distachyon]

 Score = 70.9 bits (172), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 57/92 (61%)

Query: 59  YGQSENSPSYGQPENKPSYGQPENRPSYGQPGNGASYGQPENKPSYGQPENKPSYGQPEN 118
           +G   +SP +G P + PS+G P   P++G   +  ++G P + P++G P + P++G P +
Sbjct: 2   FGTPSSSPLFGTPSSAPSFGTPSTTPAFGAAFSAPAFGTPSSTPAFGTPSSTPAFGTPSS 61

Query: 119 RPSYGQPENRPSYGQPGNGASYGQPENKPSYG 150
            P++G P + P++  P + +++G P + P++G
Sbjct: 62  TPAFGAPSSTPAFWTPSSTSAFGTPSSTPAFG 93

Source: Brachypodium distachyon

Species: Brachypodium distachyon

Genus: Brachypodium

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|154416805|ref|XP_001581424.1| hypothetical protein [Trichomonas vaginalis G3] gi|121915651|gb|EAY20438.1| hypothetical protein TVAG_110500 [Trichomonas vaginalis G3]

 Score = 70.1 bits (170), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 41/98 (41%), Positives = 51/98 (52%)

Query: 39   PPYGQPENTPPYAPAENRPSYGQSENSPSYGQPENKPSYGQPENRPSYGQPGNGASYGQP 98
            PPY  P+N PPY P +N P Y   +N P Y  P+N P Y  P+N P Y  P N   Y  P
Sbjct: 1510 PPYVPPKNIPPYVPPKNIPPYVPPKNIPPYVPPKNIPPYVPPKNIPPYVPPKNIPPYVPP 1569

Query: 99   ENKPSYGQPENKPSYGQPENRPSYGQPENRPSYGQPGN 136
            +N P Y  P+N P Y  P+N P     ++ P Y  P N
Sbjct: 1570 KNIPPYVPPKNIPPYVPPKNIPPNPPHQDIPKYIPPQN 1607

Source: Trichomonas vaginalis G3

Species: Trichomonas vaginalis

Genus: Trichomonas

Family: Trichomonadidae

Order: Trichomonadida

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	161
SGD|S000004784	430	DDR48 "DNA damage-responsive p	0.770	0.288	0.407	1e-14
FB|FBgn0038642	950	Muc91C "Mucin 91C" [Drosophila	0.900	0.152	0.386	2.4e-13
UNIPROTKB|P35637	526	FUS "RNA-binding protein FUS"	0.726	0.222	0.388	6.7e-13
UNIPROTKB|H3BPE7	527	FUS "RNA-binding protein FUS"	0.726	0.222	0.388	6.8e-13
RGD|628797	295	Prpmp5 "proline-rich protein M	0.788	0.430	0.316	8e-13
RGD|2324609	172	LOC100362849 "hypothetical pro	0.701	0.656	0.328	9.1e-13
RGD|1308864	518	Fus "fused in sarcoma" [Rattus	0.776	0.241	0.359	1.1e-12
MGI|MGI:1353633	518	Fus "fused in sarcoma" [Mus mu	0.776	0.241	0.359	1.4e-12
UNIPROTKB|G8ENL4	517	FUS "Uncharacterized protein"	0.782	0.243	0.361	1.8e-12
FB|FBgn0085362	578	Vml "Vitelline membrane-like"	0.875	0.243	0.377	4.5e-12

SGD|S000004784 DDR48 "DNA damage-responsive protein" [Saccharomyces cerevisiae (taxid:4932)]

 Score = 194 (73.4 bits), Expect = 1.0e-14, P = 1.0e-14
 Identities = 55/135 (40%), Positives = 64/135 (47%)

Query:    21 NSGLYG-NGPSGY-TPTEKRPPYGQPENTPPYAPAENRPSYGQSENSPSYGQP-ENKPSY 77
             N+  YG N    Y +  +K+  YG   N   Y  + N  SYG S N  SYG   +NK SY
Sbjct:   227 NNDSYGSNNDDSYGSSNKKKSSYGS-NNDDSYGSSNNNDSYG-SNNDDSYGSSNKNKSSY 284

Query:    78 GQPENRPSYGQPGNGASYGQP-ENKPSYGQPENKPSYGQPENRPSYGQP-ENRPSYGQPG 135
             G   N  SYG   N  SYG   + K SYG   N  SYG   N  SYG   + + SYG   
Sbjct:   285 GSSSNDDSYGSSNNDDSYGSSNKKKSSYGS-NNDDSYGS-NNDDSYGSSNKKKSSYGSSN 342

Query:   136 NGASYGQPENKPSYG 150
             N  SYG   N  SYG
Sbjct:   343 ND-SYGS-NNDDSYG 355

GO:0016887 "ATPase activity" evidence=IDA

GO:0006950 "response to stress" evidence=IEA

GO:0003924 "GTPase activity" evidence=IDA

GO:0006281 "DNA repair" evidence=IMP;IDA

GO:0005737 "cytoplasm" evidence=IDA

FB|FBgn0038642 Muc91C "Mucin 91C" [Drosophila melanogaster (taxid:7227)]

 Score = 187 (70.9 bits), Expect = 2.4e-13, P = 2.4e-13
 Identities = 68/176 (38%), Positives = 81/176 (46%)

Query:     6 SSFAEACSGPSPT--PANSGLYGNGPSGYTPTEKRPPYGQPENTPPYAPAENRPS--YGQ 61
             SS+    SGP+P+   A S  Y   PS    +    P   P  +  Y P  +RPS  YG 
Sbjct:   143 SSYLPPASGPAPSFNSAPSSSYA-APSQSASSGGPYPAAAPRPSSSYGPPASRPSSSYGP 201

Query:    62 SENSPS--YGQPEN--KP-------SYGQPENRP---SYGQPGNGASYGQPENKP---SY 104
               + PS  YG P    KP       SYG P   P   SYG P + ASYG P++ P   SY
Sbjct:   202 PPSRPSQSYGPPPQAKKPHHRRPSSSYGAPRPAPPSQSYGAPPS-ASYGPPKSAPPSQSY 260

Query:   105 GQPENKPS-YGQPENRPS--YGQPENR-PS--YGQPGN-GASYGQPEN-KPSYGQP 152
             G P    S YG P++ PS  YG P    PS  YG P    +SYG P     SYG P
Sbjct:   261 GAPAPPSSKYGPPKSAPSSSYGAPRPAAPSSSYGAPAPPSSSYGAPAAPSSSYGAP 316

GO:0005201 "extracellular matrix structural constituent" evidence=ISM

GO:0031012 "extracellular matrix" evidence=ISM

GO:0022008 "neurogenesis" evidence=IMP

UNIPROTKB|P35637 FUS "RNA-binding protein FUS" [Homo sapiens (taxid:9606)]

 Score = 179 (68.1 bits), Expect = 6.7e-13, P = 6.7e-13
 Identities = 52/134 (38%), Positives = 67/134 (50%)

Query:    23 GLYGNGPS-GYTPTEKRPPYGQPENTPPYAPAENRPSYGQSENSPSYGQPENKPSYGQPE 81
             G Y   P  GY+    +P YGQ ++   Y+ + +   YGQS  S SYGQ +N   YG   
Sbjct:    15 GAYPTQPGQGYSQQSSQP-YGQ-QSYSGYSQSTDTSGYGQSSYS-SYGQSQNT-GYGTQS 70

Query:    82 NRPSYGQPGNGASYGQPEN-KPSYGQPENKPSYGQ---PENRP-SYGQPENRPSYGQPGN 136
                 YG  G    YG  ++ + SYGQ  + P YGQ   P +   SYG      SYGQP +
Sbjct:    71 TPQGYGSTGG---YGSSQSSQSSYGQQSSYPGYGQQPAPSSTSGSYGSSSQSSSYGQPQS 127

Query:   137 GASYGQPENKPSYG 150
             G SY Q   +PSYG
Sbjct:   128 G-SYSQ---QPSYG 137

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0003723 "RNA binding" evidence=IEA

GO:0008219 "cell death" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0005634 "nucleus" evidence=IDA

GO:0000398 "mRNA splicing, via spliceosome" evidence=TAS

GO:0005654 "nucleoplasm" evidence=TAS

GO:0008380 "RNA splicing" evidence=TAS

GO:0010467 "gene expression" evidence=TAS

GO:0005730 "nucleolus" evidence=IDA

UNIPROTKB|H3BPE7 FUS "RNA-binding protein FUS" [Homo sapiens (taxid:9606)]

 Score = 179 (68.1 bits), Expect = 6.8e-13, P = 6.8e-13
 Identities = 52/134 (38%), Positives = 67/134 (50%)

Query:    23 GLYGNGPS-GYTPTEKRPPYGQPENTPPYAPAENRPSYGQSENSPSYGQPENKPSYGQPE 81
             G Y   P  GY+    +P YGQ ++   Y+ + +   YGQS  S SYGQ +N   YG   
Sbjct:    15 GAYPTQPGQGYSQQSSQP-YGQ-QSYSGYSQSTDTSGYGQSSYS-SYGQSQNT-GYGTQS 70

Query:    82 NRPSYGQPGNGASYGQPEN-KPSYGQPENKPSYGQ---PENRP-SYGQPENRPSYGQPGN 136
                 YG  G    YG  ++ + SYGQ  + P YGQ   P +   SYG      SYGQP +
Sbjct:    71 TPQGYGSTGG---YGSSQSSQSSYGQQSSYPGYGQQPAPSSTSGSYGSSSQSSSYGQPQS 127

Query:   137 GASYGQPENKPSYG 150
             G SY Q   +PSYG
Sbjct:   128 G-SYSQ---QPSYG 137

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

RGD|628797 Prpmp5 "proline-rich protein MP5" [Rattus norvegicus (taxid:10116)]

 Score = 172 (65.6 bits), Expect = 8.0e-13, P = 8.0e-13
 Identities = 45/142 (31%), Positives = 56/142 (39%)

Query:    15 PSPTPANSGLYGNGPSGYTPT--EKRPPY-GQPENTPPYAPAENRPSYGQSENSPSYGQP 71
             P   P   G     P G  P    +RPP  G P+  PP    + RP  G     P  G P
Sbjct:   115 PQGPPPPGGPQQRPPQGPPPQGGPQRPPQPGSPQGPPPPGGPQQRPPQGP----PPQGGP 170

Query:    72 ENKPSYGQPENRPSYGQPGNGASYGQPENKPSYGQPENKPSYGQPENRPSYGQPENRPSY 131
             +  P  G P+  P  G P   A    P+  P  G P+  P  G P+  P  G P+ RP  
Sbjct:   171 QRPPQPGSPQGPPPPGGPQQRA----PQGPPPQGGPQRPPQPGSPQGPPPPGGPQQRPPQ 226

Query:   132 GQPGNGASYGQPENKPSYGQPE 153
             G P  G     P+  P  G P+
Sbjct:   227 GPPPQGG----PQRPPQPGSPQ 244

GO:0005576 "extracellular region" evidence=IEA

RGD|2324609 LOC100362849 "hypothetical protein LOC100362849" [Rattus norvegicus (taxid:10116)]

 Score = 169 (64.5 bits), Expect = 9.1e-13, P = 9.1e-13
 Identities = 41/125 (32%), Positives = 60/125 (48%)

Query:    33 TPTEKRPPYGQPENTPPYAPAENRPSYGQSENSPSY-GQPENKPSYGQPENRPSYGQPGN 91
             TP +K PP G P   P     +  P  G  + SP   G+P++ P  G P+ +P   QPG 
Sbjct:    29 TPNQKPPPPGFPPRPPANGSQQGPPPQGGPQQSPLQPGKPQDPPPQGSPQQKPP--QPG- 85

Query:    92 GASYGQPENKPSYGQPENKPSY-GQPENRPSYGQPENRPSY-GQPGNGASYGQPENKPSY 149
                  +P+  P  G P+ KP   G+P+  P  G P+ +P   G+P      G P+ KP  
Sbjct:    86 -----KPQGPPPPGGPQKKPPQPGKPQGPPPPGGPQKKPPQPGKPQGPTPPGGPQQKPPQ 140

Query:   150 -GQPE 153
              G+P+
Sbjct:   141 AGKPQ 145

GO:0005576 "extracellular region" evidence=IEA

RGD|1308864 Fus "fused in sarcoma" [Rattus norvegicus (taxid:10116)]

 Score = 177 (67.4 bits), Expect = 1.1e-12, P = 1.1e-12
 Identities = 51/142 (35%), Positives = 67/142 (47%)

Query:    23 GLYGNGPS-GYTPTEKRPPYGQPENTPPYAPAENRPSYGQSENSPSYGQPENKPSYGQPE 81
             G Y   P  GY+  +   PYGQ ++   Y  + +   YGQS    SYGQ +N   YG   
Sbjct:    15 GAYPTQPGQGYSQ-QSNQPYGQ-QSYSGYGQSADTSGYGQSSYGSSYGQTQNT-GYGTQS 71

Query:    82 NRPSYGQPGNGASYGQPEN-KPSYGQPENKPSYGQ---PENRP-SYGQPENRPSYGQPGN 136
                 YG  G    YG  ++ + SYGQ  + P YGQ   P +   SYG      SYGQP +
Sbjct:    72 APQGYGSTGG---YGSSQSSQSSYGQQSSYPGYGQQPAPSSTSGSYGGSSQSSSYGQPQS 128

Query:   137 GASYGQPEN----KPSYGQPEN 154
             G  YGQ       + SYGQ ++
Sbjct:   129 GG-YGQQSGYGGQQQSYGQQQS 149

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA;ISO

GO:0005737 "cytoplasm" evidence=IEA;ISO

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005730 "nucleolus" evidence=ISO

MGI|MGI:1353633 Fus "fused in sarcoma" [Mus musculus (taxid:10090)]

 Score = 176 (67.0 bits), Expect = 1.4e-12, P = 1.4e-12
 Identities = 51/142 (35%), Positives = 67/142 (47%)

Query:    23 GLYGNGPS-GYTPTEKRPPYGQPENTPPYAPAENRPSYGQSENSPSYGQPENKPSYGQPE 81
             G Y   P  GY+    +P YGQ ++   Y  + +   YGQS    SYGQ +N   YG   
Sbjct:    15 GAYPTQPGQGYSQQSSQP-YGQ-QSYSGYGQSADTSGYGQSSYGSSYGQTQNT-GYGTQS 71

Query:    82 NRPSYGQPGNGASYGQPEN-KPSYGQPENKPSYGQ---PENRP-SYGQPENRPSYGQPGN 136
                 YG  G    YG  ++ + SYGQ  + P YGQ   P +   SYG      SYGQP +
Sbjct:    72 APQGYGSTGG---YGSSQSSQSSYGQQSSYPGYGQQPAPSSTSGSYGGSSQSSSYGQPQS 128

Query:   137 GASYGQPEN----KPSYGQPEN 154
             G  YGQ       + SYGQ ++
Sbjct:   129 GG-YGQQSGYGGQQQSYGQQQS 149

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0003723 "RNA binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISO;IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|G8ENL4 FUS "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 175 (66.7 bits), Expect = 1.8e-12, P = 1.8e-12
 Identities = 51/141 (36%), Positives = 66/141 (46%)

Query:    23 GLYGNGPS-GYTPTEKRPPYGQPENTPPYAPAENRPSYGQSENSPSYGQPENKPSYGQPE 81
             G Y   P  GY+  +   PYGQ ++   Y  + +   YGQS    SYGQ +N   YG   
Sbjct:    15 GAYPTQPGQGYSQ-QSNQPYGQ-QSYSGYGQSADTSGYGQSSYGSSYGQTQNT-GYGAQS 71

Query:    82 NRPSYGQPGNGASYGQPENKPSYGQPENKPSYGQ---PENRP-SYGQPENRPSYGQPGNG 137
                 YG  G G   GQ  ++ SYGQ  + P YGQ   P +   SYG       YGQP +G
Sbjct:    72 APQGYGSTG-GYGSGQG-SQSSYGQQSSYPGYGQQPAPSSTSGSYGTSSQSSGYGQPQSG 129

Query:   138 ASYGQPEN----KPSYGQPEN 154
               YGQ       + SYGQ ++
Sbjct:   130 G-YGQQSGYGGQQQSYGQQQS 149

GO:0005737 "cytoplasm" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

FB|FBgn0085362 Vml "Vitelline membrane-like" [Drosophila melanogaster (taxid:7227)]

 Score = 172 (65.6 bits), Expect = 4.5e-12, P = 4.5e-12
 Identities = 60/159 (37%), Positives = 70/159 (44%)

Query:     3 ACPSSFAEACSGPS---PT-PANSGLYGNGPSGYTPTEKRPPYGQPENTPPY-APAENRP 57
             A P+S   A +GPS   P  P+ S    + P+      K P Y  P   P Y APA   P
Sbjct:   245 AAPASSYSAPAGPSYSAPAAPSYSAPSYSAPASSYSALKAPSYSAPA-APSYSAPAA--P 301

Query:    58 SYGQSENSPSYGQPENKPSYGQPENRPSYGQPGNGASYGQPENKPSYGQPENKPSYGQPE 117
             SY  S  SPSY  P +  SY  P   P+Y  P    SY  P   PSY  P   PSY  P 
Sbjct:   302 SYSSSA-SPSYSSPASS-SYSAPA-APTYSAP-KAQSYSAPA-APSYSAPA-APSYSAPA 355

Query:   118 NRPSYGQPENRPSYGQPGNGASYGQPENKPSYGQPENGA 156
             +  SY  P   PSY  P    SY  P   PSY  P + +
Sbjct:   356 SS-SYSAPA-APSYSAPA-APSYSAPA-APSYSAPASSS 390

GO:0009950 "dorsal/ventral axis specification" evidence=IGI

GO:0060388 "vitelline envelope" evidence=IDA

GO:0007305 "vitelline membrane formation involved in chorion-containing eggshell formation" evidence=ISM

GO:0008316 "structural constituent of vitelline membrane" evidence=ISM

GO:0035805 "egg coat" evidence=ISM

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	161
TIGR03490	541	TIGR03490, Mycoplas_LppA, mycoides cluster lipopro	4e-04
PTZ00395	1560	PTZ00395, PTZ00395, Sec24-related protein; Provisi	0.004

>gnl|CDD|234229 TIGR03490, Mycoplas_LppA, mycoides cluster lipoprotein, LppA/P72 family

 Score = 39.0 bits (91), Expect = 4e-04
 Identities = 25/107 (23%), Positives = 38/107 (35%), Gaps = 17/107 (15%)

Query: 44  PENTPPYAPAENRPSYGQSENSPSYGQPENKPSYGQPENRPSYGQPGNGASYGQPENKPS 103
             +  P    E +P+    EN+P    P+   +    EN  +     N     + E  PS
Sbjct: 29  SNSKQPEKKPEIKPN----ENTP--KIPKKPDNKEPSENNNNKSNNEN-----KDEENPS 77

Query: 104 YGQPENKPSYGQPENRPSYG-----QPENRPSYGQPGNGASYGQPEN 145
              PE KP   + +           +P+ +P   QP N     QP N
Sbjct: 78  STNPEKKPDPSKNKEEIEKPKDEPKKPDKKPQADQP-NNVHADQPNN 123

Members of this protein family occur in Mycoplasma mycoides, Mycoplasma hyopneumoniae, and related Mycoplasmas in small paralogous families that may also include truncated forms and/or pseudogenes. Members are predicted lipoproteins with a conserved signal peptidase II processing and lipid attachment site. Note that the name for certain characterized members, p72, reflects an anomalous apparent molecular weight, given a theoretical MW of about 61 kDa. Length = 541

>gnl|CDD|185594 PTZ00395, PTZ00395, Sec24-related protein; Provisional

 Score = 36.6 bits (84), Expect = 0.004
 Identities = 33/137 (24%), Positives = 49/137 (35%), Gaps = 11/137 (8%)

Query: 13  SGPSPTPANSGLYGNGPSGYTPTEKRPPYGQPENTPPYA--PAENRPSYGQSENSPSYGQ 70
           +G S    ++  Y N P+  TP    P    P + PP +  P  N P      ++     
Sbjct: 412 AGYSNPGNSNPGYNNAPNSNTPYNNPPNSNTPYSNPPNSNPPYSNLPYSNTPYSNAPL-- 469

Query: 71  PENKPSYGQPENRPSYGQPGNGASYGQPE-NKPSYGQPENKPSYGQPEN---RPSYGQPE 126
             N P     ++  +Y       +  QP  N P+  QP     +G   N    P   +P 
Sbjct: 470 -SNAPPSSAKDHHSAYHAAYQHRAANQPAANLPTANQPAANNFHGAAGNSVGNPFASRPF 528

Query: 127 NRPSYGQPGNGASYGQP 143
               YG  GN A+   P
Sbjct: 529 GSAPYG--GNAATTADP 543

Length = 1560

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

No hit with probability above 80.00

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	161
1m2v_B	926	SEC24, protein transport protein SEC24, SEC24P, SE	2e-05
1m2v_B	926	SEC24, protein transport protein SEC24, SEC24P, SE	6e-05
1m2v_B	926	SEC24, protein transport protein SEC24, SEC24P, SE	6e-05
1m2v_B	926	SEC24, protein transport protein SEC24, SEC24P, SE	1e-04
1m2v_B	926	SEC24, protein transport protein SEC24, SEC24P, SE	5e-04

>1m2v_B SEC24, protein transport protein SEC24, SEC24P, SEC24 protein, abnormal nuclear; zinc-finger, beta barrel, VWA domain, gelsolin domain,; 2.75A {Saccharomyces cerevisiae} SCOP: a.71.2.1 b.2.8.1 c.62.1.2 d.109.2.1 g.41.10.1 Length = 926

 Score = 42.5 bits (99), Expect = 2e-05
 Identities = 18/116 (15%), Positives = 30/116 (25%), Gaps = 3/116 (2%)

Query: 37  KRPPYGQPENTPPYAPAENRPSYGQSENSPSYGQPENKPSYGQPENRPSYGQPGNGASYG 96
           K+  Y Q +           P    ++  P         SYGQ    P    P  G    
Sbjct: 5   KKRVYPQAQLQYGQNAT---PLQQPAQFMPPQDPAAAGMSYGQMGMPPQGAVPSMGQQQF 61

Query: 97  QPENKPSYGQPENKPSYGQPENRPSYGQPENRPSYGQPGNGASYGQPENKPSYGQP 152
               +    Q  ++ +    +         +  +Y QP      G P  +      
Sbjct: 62  LTPAQEQLHQQIDQATTSMNDMHLHNVPLVDPNAYMQPQVPVQMGTPLQQQQQPMA 117

>1m2v_B SEC24, protein transport protein SEC24, SEC24P, SEC24 protein, abnormal nuclear; zinc-finger, beta barrel, VWA domain, gelsolin domain,; 2.75A {Saccharomyces cerevisiae} SCOP: a.71.2.1 b.2.8.1 c.62.1.2 d.109.2.1 g.41.10.1 Length = 926

 Score = 41.3 bits (96), Expect = 6e-05
 Identities = 23/139 (16%), Positives = 36/139 (25%), Gaps = 4/139 (2%)

Query: 19  PANSGLYGNGPSGYTPTEKRPPYGQPENTPPYAPAENRPSYGQSENSPSYGQPENKPSYG 78
           P     YG   +      +  P   P            P  G   +              
Sbjct: 10  PQAQLQYGQNATPLQQPAQFMPPQDPAAAGMSYGQMGMPPQGAVPSMGQQQFLTPAQEQL 69

Query: 79  QPENRPSYGQPGNGASYGQPENKP-SYGQPENKPSYGQPENRPSYGQPENRPSYGQPGNG 137
             +   +     +   +  P   P +Y QP+     G P  +    QP   P+YGQP   
Sbjct: 70  HQQIDQATTSMNDMHLHNVPLVDPNAYMQPQVPVQMGTPLQQQQ--QPMAAPAYGQPSAA 127

Query: 138 ASYG-QPENKPSYGQPENG 155
                +P N+         
Sbjct: 128 MGQNMRPMNQLYPIDLLTE 146

>1m2v_B SEC24, protein transport protein SEC24, SEC24P, SEC24 protein, abnormal nuclear; zinc-finger, beta barrel, VWA domain, gelsolin domain,; 2.75A {Saccharomyces cerevisiae} SCOP: a.71.2.1 b.2.8.1 c.62.1.2 d.109.2.1 g.41.10.1 Length = 926

 Score = 41.3 bits (96), Expect = 6e-05
 Identities = 28/129 (21%), Positives = 37/129 (28%), Gaps = 5/129 (3%)

Query: 25  YGNGPSGYTPTEKRPPYGQPENT-PPYAPAENRPSYGQSENSPSYGQPENKPSYGQPENR 83
           Y      Y       P  QP    PP  PA    SYGQ    P    P           +
Sbjct: 9   YPQAQLQYGQN--ATPLQQPAQFMPPQDPAAAGMSYGQMGMPPQGAVPSMGQQQFLTPAQ 66

Query: 84  PSYGQPGNGASYGQPENKPSYGQPENKPSYGQPENRPSYGQPENRPSYGQPGNGASYGQP 143
               Q  + A+    +         +  +Y QP+     G P  +    QP    +YGQP
Sbjct: 67  EQLHQQIDQATTSMNDMHLHNVPLVDPNAYMQPQVPVQMGTPLQQQQ--QPMAAPAYGQP 124

Query: 144 ENKPSYGQP 152
                    
Sbjct: 125 SAAMGQNMR 133

>1m2v_B SEC24, protein transport protein SEC24, SEC24P, SEC24 protein, abnormal nuclear; zinc-finger, beta barrel, VWA domain, gelsolin domain,; 2.75A {Saccharomyces cerevisiae} SCOP: a.71.2.1 b.2.8.1 c.62.1.2 d.109.2.1 g.41.10.1 Length = 926

 Score = 40.6 bits (94), Expect = 1e-04
 Identities = 14/122 (11%), Positives = 28/122 (22%)

Query: 13  SGPSPTPANSGLYGNGPSGYTPTEKRPPYGQPENTPPYAPAENRPSYGQSENSPSYGQPE 72
               P    +     G  G  P    P  GQ +   P     ++     + +        
Sbjct: 28  QFMPPQDPAAAGMSYGQMGMPPQGAVPSMGQQQFLTPAQEQLHQQIDQATTSMNDMHLHN 87

Query: 73  NKPSYGQPENRPSYGQPGNGASYGQPENKPSYGQPENKPSYGQPENRPSYGQPENRPSYG 132
                     +P            Q +   +    +   + GQ     +   P +  +  
Sbjct: 88  VPLVDPNAYMQPQVPVQMGTPLQQQQQPMAAPAYGQPSAAMGQNMRPMNQLYPIDLLTEL 147

Query: 133 QP 134
            P
Sbjct: 148 PP 149

>1m2v_B SEC24, protein transport protein SEC24, SEC24P, SEC24 protein, abnormal nuclear; zinc-finger, beta barrel, VWA domain, gelsolin domain,; 2.75A {Saccharomyces cerevisiae} SCOP: a.71.2.1 b.2.8.1 c.62.1.2 d.109.2.1 g.41.10.1 Length = 926

 Score = 38.7 bits (89), Expect = 5e-04
 Identities = 21/129 (16%), Positives = 37/129 (28%), Gaps = 4/129 (3%)

Query: 13  SGPSPTPANSGLYGNGPSGYTPTEKRPPYGQPENTPPYAPAENRPSYGQSENSPSYGQPE 72
             P+    + G  G  P G  P+  +  +  P     +   +   +     +  +    +
Sbjct: 33  QDPAAAGMSYGQMGMPPQGAVPSMGQQQFLTPAQEQLHQQIDQATTSMNDMHLHNVPLVD 92

Query: 73  NKPSYGQPENRPSYGQPGNGASYGQPENKPSYGQPENKPSYG-QPENRPSYGQPENRPSY 131
              +Y QP+     G P       QP   P+YGQP        +P N+            
Sbjct: 93  P-NAYMQPQVPVQMGTPLQQQQ--QPMAAPAYGQPSAAMGQNMRPMNQLYPIDLLTELPP 149

Query: 132 GQPGNGASY 140
                    
Sbjct: 150 PITDLTLPP 158

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00