Psyllid ID: psy12614
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
|
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 708 | 2.2.26 [Sep-21-2011] | |||||||
| Q969X6 | 686 | Cirhin OS=Homo sapiens GN | yes | N/A | 0.932 | 0.962 | 0.312 | 6e-84 | |
| Q8R2N2 | 686 | Cirhin OS=Mus musculus GN | yes | N/A | 0.932 | 0.962 | 0.305 | 8e-80 | |
| Q06679 | 776 | U3 small nucleolar RNA-as | yes | N/A | 0.912 | 0.832 | 0.257 | 3e-47 | |
| O60161 | 710 | U3 small nucleolar RNA-as | yes | N/A | 0.895 | 0.892 | 0.235 | 1e-39 | |
| O13282 | 643 | Transcription initiation | no | N/A | 0.144 | 0.158 | 0.288 | 3e-07 | |
| O61585 | 690 | Katanin p80 WD40 repeat-c | no | N/A | 0.305 | 0.313 | 0.219 | 2e-06 | |
| Q54PE0 | 922 | Periodic tryptophan prote | no | N/A | 0.278 | 0.213 | 0.258 | 4e-06 | |
| Q42384 | 486 | Protein pleiotropic regul | no | N/A | 0.255 | 0.372 | 0.242 | 2e-05 | |
| Q26613 | 686 | 77 kDa echinoderm microtu | no | N/A | 0.446 | 0.460 | 0.207 | 2e-05 | |
| O02482 | 612 | Transcription factor unc- | no | N/A | 0.227 | 0.263 | 0.232 | 2e-05 |
| >sp|Q969X6|CIR1A_HUMAN Cirhin OS=Homo sapiens GN=CIRH1A PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 312 bits (800), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 219/700 (31%), Positives = 345/700 (49%), Gaps = 40/700 (5%)
Query: 11 MGTYGVHNIKFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPL 70
MG + VH ++F+ P I C+A +S+RLAVSR D ++EI+++S ++ F G
Sbjct: 1 MGEFKVHRVRFFNYVPSGIRCVAYNNQSNRLAVSRTDGTVEIYNLSANYFQEKFFPGHE- 59
Query: 71 SNSIECLTWFN-DRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAG 129
S + E L W RLFS GL G + EYD++ LNIK + G W ++ L G
Sbjct: 60 SRATEALCWAEGQRLFSAGLNGEIMEYDLQALNIKYAMDAFGGPIWSMAASPSGSQLLVG 119
Query: 130 TEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAAAVRVWDIHKGHAI 189
E G + LFQI+ + + +E+ DRQ+ RIL +WH SG ++ G + V+D+ G A+
Sbjct: 120 CEDGSVKLFQITPDKIQFERNFDRQKSRILSLSWHPSGTHIAAGSIDYISVFDVKSGSAV 179
Query: 190 HKMSLDKS--SKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVKTH---K 244
HKM +D+ + VW VAF +D TII+ DS G V+FWD TG VK+H
Sbjct: 180 HKMIVDRQYMGVSKRKCIVWGVAFLSDGTIISVDSAGKVQFWDSATGTL---VKSHLIAN 236
Query: 245 KDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGD 304
D+ ++ V++ E+ + TV FQ V S S +Q WVR+ H D
Sbjct: 237 ADVQSIAVADQEDSFVVGTAEGTVFHFQLV---PVTSNSSEKQ----WVRTKPFQHHTHD 289
Query: 305 VKSLALHGNRLYSGGLDSYLSLSYYPPKTLVK-YPCTLAQST-----PVSLAKDIQHVLL 358
V+++A L SGG D++L K VK Y L + T +S +K Q +L
Sbjct: 290 VRTVAHSPTALISGGTDTHLVFRPLMEKVEVKNYDAALRKITFPHRCLISCSKKRQLLLF 349
Query: 359 QYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYV 418
Q+ HLELW LGS +T N +PL ++ + I CS +S G ++
Sbjct: 350 QFAHHLELWRLGSTVATG----KNGDTLPLSKNADHLLHLKTKGPENIICSCISPCGSWI 405
Query: 419 AYSTESCVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVLISADSTLLLAVSLNGPLYI 478
AYST S L+ L+ + D + R+ +PA L ++ +L S DST L S G L+I
Sbjct: 406 AYSTVSRFFLYRLNYEHDNISLKRVSKMPAFLRSAL--QILFSEDSTKLFVASNQGALHI 463
Query: 479 IDLSSLEIKYCVDPYKSNLMSDVISLVQMSECKQYIVCADRKS--HVVIWKNGQHHASLP 536
+ LS K+ + + + L+ +S ++ + + HV K + H ++P
Sbjct: 464 VQLSGGSFKHLHAFQPQSGTVEAMCLLAVSPDGNWLAASGTSAGVHVYNVKQLKLHCTVP 523
Query: 537 RYRKPSTAMAIHPTLSTLVTVYSDHRIVEFDLNRKAFTTFSRKLETNHPNE-WLSRQLPV 595
Y P TAMAI P + LV +SD ++ E+ + K +T +SR ++ + WL R P+
Sbjct: 524 AYNFPVTAMAIAPNTNNLVIAHSDQQVFEYSIPDKQYTDWSRTVQKQGFHHLWLQRDTPI 583
Query: 596 LGIEFDPQDSSLIYLMDDSALCVINKNKSLAHADAKIPRLGPKVVSGDSSNSTHVIESKV 655
I F P+ I L D C+I+K+ L + + P +N + VI +
Sbjct: 584 THISFHPKRPMHILLHDAYMFCIIDKSLPLPNDKTLLYNPFP------PTNESDVIRRRT 637
Query: 656 --AFHFVRRNKHLVYFGSLNDKEMLSVQVNPLSFMEKLPP 693
AF + K L++ L+++ +++V+ + +LPP
Sbjct: 638 AHAFKISKIYKPLLFMDLLDERTLVAVERPLDDIIAQLPP 677
|
Homo sapiens (taxid: 9606) |
| >sp|Q8R2N2|CIR1A_MOUSE Cirhin OS=Mus musculus GN=Cirh1a PE=2 SV=3 | Back alignment and function description |
|---|
Score = 298 bits (764), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 214/700 (30%), Positives = 339/700 (48%), Gaps = 40/700 (5%)
Query: 11 MGTYGVHNIKFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPL 70
MG + VH ++F+ P I C+A +S+RLAVSR D ++EI+++S ++ F G
Sbjct: 1 MGEFKVHRVRFFNYVPSGIRCVAYNNQSNRLAVSRTDGTVEIYNLSANYFQEKFFPGHE- 59
Query: 71 SNSIECLTWFN-DRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAG 129
S E L W RLFS GL G + EYD++ LNIK + G W ++ L G
Sbjct: 60 SRGTEALCWAGGQRLFSAGLNGEILEYDLQALNIKYTLDAFGGPIWSMTASPSGSQLLVG 119
Query: 130 TEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAAAVRVWDIHKGHAI 189
E G + LF+++ E + + + DRQ+ RIL WH +G ++ G + V+D+ G I
Sbjct: 120 CEDGSVKLFEVTPEKIQFARNFDRQKSRILSLCWHPAGTHVAAGSLDYISVFDVKSGSII 179
Query: 190 HKMSLDKS--SKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVKTH---K 244
KM LD+ VW VAF +D T+I+ DS G V+ WD TG + VK+H
Sbjct: 180 RKMVLDRQHLGVTKSRCIVWGVAFLSDGTVISVDSVGKVQLWDSATG---TLVKSHLVAN 236
Query: 245 KDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGD 304
D+ ++ V++ E+ + TV FQ + S S +Q WVR+ H D
Sbjct: 237 ADVQSIAVADQEDSFVVGTAEGTVFHFQLV---SMTSNSSEKQ----WVRTKPFQHHTHD 289
Query: 305 VKSLALHGNRLYSGGLDSYLSLSYYPPKTLVK-YPCTLAQST-----PVSLAKDIQHVLL 358
V+++A L SGG D++L + + VK Y L + T +S +K Q +L
Sbjct: 290 VRAVAHSPTALISGGTDTHLVIRPLMERVEVKNYDAALRKITFPHRRLISCSKRRQLLLF 349
Query: 359 QYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYV 418
Q+ HLELW LGS +T N +PL ++ + I CS VS G ++
Sbjct: 350 QFAHHLELWRLGSTSATG----KNGDTLPLSKNADHLLHLKTKGPENIICSCVSPCGSWI 405
Query: 419 AYSTESCVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVLISADSTLLLAVSLNGPLYI 478
AYST S L+ L + D + R+ LP+ L ++ H+L S DST LL S G L+I
Sbjct: 406 AYSTASRFFLYRLKYERDNISLQRVSKLPSFLRSAL--HILFSEDSTKLLVASNQGSLHI 463
Query: 479 IDLSSLEIKYCVDPYKSNLMSDVISLVQMSECKQYIVCADRKS--HVVIWKNGQHHASLP 536
+ LS K+ + + + L+ +S ++ + + HV + + H ++P
Sbjct: 464 VHLSEGSFKHLHTFQPQSGTVEAMCLLAVSPDGNWLAASGTSAGVHVYDLHHLKLHCTVP 523
Query: 537 RYRKPSTAMAIHPTLSTLVTVYSDHRIVEFDLNRKAFTTFSRKLETNHPNE-WLSRQLPV 595
Y P TA+AI P + LV +SD ++ EF + K +T +SR L+ ++ WL R P+
Sbjct: 524 AYNFPVTALAIAPNTNNLVIAHSDQQVFEFSIPEKQYTEWSRSLQKQGFHQLWLQRDTPI 583
Query: 596 LGIEFDPQDSSLIYLMDDSALCVINKNKSLAHADAKIPRLGPKVVSGDS--SNSTHVIES 653
I F P+ I L D C+I+K+ L + + P D +TH
Sbjct: 584 THISFHPKRPMHILLHDAYMFCIIDKSLPLPNEKTVLYNPLPPKNESDVFLRRTTH---- 639
Query: 654 KVAFHFVRRNKHLVYFGSLNDKEMLSVQVNPLSFMEKLPP 693
F + K L++ L+++ +++V+ + +LPP
Sbjct: 640 --GFKMSKIYKPLLFMDLLDERTLVAVERPLDDIIAQLPP 677
|
Mus musculus (taxid: 10090) |
| >sp|Q06679|UTP4_YEAST U3 small nucleolar RNA-associated protein 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=UTP4 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 190 bits (482), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 196/762 (25%), Positives = 331/762 (43%), Gaps = 116/762 (15%)
Query: 16 VHNIKFYAPEPKVINCIACEPKSS---------RLAVSRADQSIEIWDISETPHVDRVFI 66
VH +F P I +A KS+ RLA+ R++ +IEIW+ + V
Sbjct: 33 VHRCRFVDFTPATITSLAFSHKSNINKLTPSDLRLAIGRSNGNIEIWNPRNNWFQEMVIE 92
Query: 67 GDPLSNSIECLTWFND-----RLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHK 121
G SIE L W N RLFS G V E+D+ + SG W +S++
Sbjct: 93 GGK-DRSIEGLCWSNVNGESLRLFSIGGSTVVTEWDLATGLPLRNYDCNSGVIWSISIND 151
Query: 122 KKRLLAAGTEQGHINLFQISD-EGLL-YEKLLDRQQGRILCTAWHSSGDYLVTGCA-AAV 178
+ L+ G + G + L IS G+L ++ +L RQ+ R+L AW D+++ GC+ +
Sbjct: 152 SQDKLSVGCDNGTVVLIDISGGPGVLEHDTILMRQEARVLTLAWKKD-DFVIGGCSDGRI 210
Query: 179 RVWDIHK-----GHAIHKMSLDKSSKFSKNTAVWCVAFCADF-TIITGDSGGFVRFWDGK 232
R+W K G +H M +DK+ K S T VW V + I +GDS G ++FWD +
Sbjct: 211 RIWSAQKNDENMGRLLHTMKVDKAKKES--TLVWSVIYLPRTDQIASGDSTGSIKFWDFQ 268
Query: 233 TGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCF-QRTRKPQVCSTSGPEQGSSV 291
K H D+L LT D NY++ AGVD + F Q T K Q ++
Sbjct: 269 FATLNQSFKAHDADVLCLTTDTDNNYVFSAGVDRKIFQFSQNTNKS---------QKNNR 319
Query: 292 WVRSVNRVIHEGDVKSLALHGNR----LYSGGLDSYL---SLSYYPPKTLVKYPCTLAQS 344
WV S NR++H D++++ + ++ L SGG++ L SL+ + K P S
Sbjct: 320 WVNSSNRLLHGNDIRAICAYQSKGADFLVSGGVEKTLVINSLTSFSNGNYRKMPTVEPYS 379
Query: 345 TPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNA 404
V + K+ + V+ S +++W++G TD S+ N +L+ K++ ++
Sbjct: 380 KNVLVNKEQRLVVSWSESTVKIWTMG----TDSSTEQNY---------KLVCKLTLKDDQ 426
Query: 405 TIRCSVVSNDGKYVAYSTESCVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVLISADS 464
I +S DG+ + S ++ L G+K +++++ N L T ++ D+
Sbjct: 427 NISTCSLSPDGQVLVVGRPSTTKVFHLQPVGNKLKVTKLDN---DLLLRTSTKLVKFIDN 483
Query: 465 TLLLAVSLNGPLYIIDLSSLEIK-------YCVDPYKSNLMSDVISLVQMSECKQYIVCA 517
+ ++ S ++I+DL S E + V KS++ I+ + E Q I
Sbjct: 484 SKIVICSCEDDVFIVDLESEEDEKPQEVELLEVTSTKSSIKVPYINRINHLEVDQNIAVI 543
Query: 518 DRKSHVVIWKNGQHHASLP--RYRKPSTAMAIHPTLSTLVTVYSDHRIVEFDLN------ 569
R VV + + S P R TA+ I+ + ++V + +D++I EF++N
Sbjct: 544 SRGCGVVDILDLKARISKPLARLNNFITAVHINTSRKSVVVITADNKIYEFNMNLNSEAE 603
Query: 570 ----RKAFTTFSRKLETNHPNEWLSRQLPVLGIEFDPQDSSLIYLMDDSALCVIN----- 620
T +S+ N P EW + + +GI D ++SS ++ + + I+
Sbjct: 604 NEDSESVLTQWSKNNTDNLPKEWKTLKENCVGIFSDIENSSRLWFWGATWISRIDFDVDF 663
Query: 621 ------KNKSLAHADAKI-----------------------PRLGPKVVSGDSSNSTHVI 651
K K H I L + G+ ST V
Sbjct: 664 PINKRRKQKKRTHEGLTITDESNFMNDEEDDEDDDIDMEISENLNVLLNQGNKIKSTDVQ 723
Query: 652 ---ESKVAFHFVRRNKHLVYFGSLNDKEMLSVQVNPLSFMEK 690
ES F F + K L++ ++ E+ ++ NPL+F K
Sbjct: 724 RNEESSGHFFFTDKYKPLLFVDLISSNELAIIERNPLTFHSK 765
|
Involved in nucleolar processing of pre-18S ribosomal RNA. Required for optimal pre-ribosomal RNA transcription by RNA polymerase I together with a subset of U3 proteins required for transcription (t-UTPs). Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) |
| >sp|O60161|UTP4_SCHPO U3 small nucleolar RNA-associated protein 4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=utp4 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 165 bits (418), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 172/730 (23%), Positives = 312/730 (42%), Gaps = 96/730 (13%)
Query: 16 VHNIKFYAPEPKVINCIACEPKSSR---------LAVSRADQSIEIWDISETPHVDRVFI 66
+H +F P I +A KS + LAV RA +IEIW+ + V
Sbjct: 3 IHRCRFIDYTPSAITAMAFSHKSGQNDSMPNNLLLAVGRASGNIEIWNPRNDWCLKTVLY 62
Query: 67 GDPLSNSIECLTWFND----RLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKK 122
G + SIE + W RLFS G + E+++ + +G W +++ +
Sbjct: 63 GG-VDRSIEGIVWSTGEEELRLFSIGFSTTITEWNLHTGKPLVNQDSNAGAIWSIAICDE 121
Query: 123 KRLLAAGTEQGHINLFQISD-EGLL-YEKLLDRQQGRILCTAWHSSGDYLVTGCA-AAVR 179
+ LA G + G LF IS G++ ++++L RQ RIL + + D+LV GCA ++
Sbjct: 122 TKTLAVGCDDGSCVLFDISGGPGVIEFKRVLMRQTSRILSLDFQTK-DHLVGGCADGVIK 180
Query: 180 VWDIHKGHA--IHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQW 237
VWD+ ++ I +M +D++ K + +W V D TI++ DS G V+FW+GK
Sbjct: 181 VWDLSTPNSAIISRMQVDRARK-GEAALIWAVKSLRDGTIVSADSSGAVKFWNGKFFTLS 239
Query: 238 SDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVN 297
K H D L L VS + + ++ +G+D + + R E G WV +
Sbjct: 240 QSFKLHLADALCLGVSANGDMVFSSGIDRKTIQYSR------------EGGKREWVSNSF 287
Query: 298 RVIHEGDVKSLALHGNR----LYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTP----VSL 349
R H DV+ +A+ + L SGG+D + L+ P + + + + P +++
Sbjct: 288 RRFHSHDVRCMAVFECKSLDVLISGGMD--MMLAVIPVRQFNRKNHRMISAVPQRPRMAV 345
Query: 350 AKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCS 409
A + +L + LW +GS R ++K+ + I +
Sbjct: 346 APKARLFMLWNDHEVLLWRIGSPGY------------------RFLLKIVLADEENISHA 387
Query: 410 VVSNDGKYVAYSTESCVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVL-ISADSTLLL 468
+S DG+ +A S+ +L+ L + ++ +++ +I +L + D L+
Sbjct: 388 AISPDGELIAISSVLRTKLYQLQYSDENVKVETVED---SFLSNIGASLLSFTVDKNKLI 444
Query: 469 AVSLNGPLYIIDLS-----SLEIKYCVDP--------YKSNL--MSDVISLVQMSECKQY 513
VS + +++I+LS LE+ P +SN+ M D I + +S Y
Sbjct: 445 LVSNDSEIFLIELSRLDSRQLEVFELSQPTSKKIAPRQRSNVSSMCDGICSIAVSSDGDY 504
Query: 514 IVCADRKSHVVIWK-NGQHHASLPRYRKPSTAMAIHPTL-STLVTVYSDHRIVEFDLNRK 571
AD ++ + + ++ LPR AMA P + L + +++ EFD+ +
Sbjct: 505 FAVADTVGNIFCYSLSNLTYSELPRVNTYVRAMAFRPDVRGRLAVATAGNQVYEFDVQSR 564
Query: 572 AFTTFSRKLETNHPNEWLSRQLPVLGIEFDPQDSSLIYLMDDSALCVINKNKSLAHADAK 631
+ +S+ TN P E+ G FD + S ++ + + + N L A
Sbjct: 565 KLSEWSKNNSTNMPKEFSQLLDKAFGAFFDSKHPSRFWIWSANWVSFFDLNLQLPAPRAA 624
Query: 632 IPR-----------LGPKVVSGDSSN--STHVIESKVAFHFVRRNKHLVYFGSLNDKEML 678
R L K ++ +SN S + F + + ++ GS+ + E+L
Sbjct: 625 GKRKIEMNATVDGNLNDKKLANANSNGISNYGTGDSRCFWITHKYRPMLLVGSVGNSELL 684
Query: 679 SVQVNPLSFM 688
V+ P++ M
Sbjct: 685 VVE-RPIADM 693
|
Involved in nucleolar processing of pre-18S ribosomal RNA. Required for optimal pre-ribosomal RNA transcription by RNA polymerase I together with a subset of U3 proteins required for transcription (t-UTPs). Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) |
| >sp|O13282|TAF5_SCHPO Transcription initiation factor TFIID subunit 5 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=taf5 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 57.8 bits (138), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 9/111 (8%)
Query: 160 CTAWHSSGDYLVTGCA-AAVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCAD-FTI 217
C +H + Y++TG + R+WD+H+GH++ + V VA D T+
Sbjct: 468 CVTFHPNSAYVLTGSSDKTCRLWDVHRGHSVRVFN-------GHTQPVTAVAIAPDGHTM 520
Query: 218 ITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTV 268
+ DS G + WD TG + ++ H+ +I +L+ S + L G D TV
Sbjct: 521 ASADSEGLIHLWDIGTGRRIKTMRGHRGNIYSLSFSRESTVLVSGGSDCTV 571
|
TAFs are components of the transcription factor IID (TFIID) complex that are essential for mediating regulation of RNA polymerase transcription. Regulates the genes involved in ubiquitin-dependent proteolysis during the progression of M-phase of mitosis. Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) |
| >sp|O61585|KTNB1_STRPU Katanin p80 WD40 repeat-containing subunit B1 OS=Strongylocentrotus purpuratus GN=KATNB1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 103/251 (41%), Gaps = 35/251 (13%)
Query: 29 INCIACEPKSSRLAVSRA-DQSIEIWDISE----------TPHVDRVFIGDPLSNSIECL 77
+NC+A P S R+ V+ D+ + +W + + T VD V NS E L
Sbjct: 19 VNCLALGPMSGRVMVTGGEDKKVNLWAVGKQNCIISLSGHTSPVDSVKF-----NSSEEL 73
Query: 78 TWFNDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINL 137
+ +G G + YD+ I + + C+ H +A+G+ ++ L
Sbjct: 74 ------VVAGSQSGTMKIYDLEPAKIVRTLTGHRNSIRCMDFHPFGEFVASGSTDTNVKL 127
Query: 138 FQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCA-AAVRVWDIHKGHAIHKMSLDK 196
+ + +G +Y Q ++ + G +LVT +++WD+ G +
Sbjct: 128 WDVRRKGCIYTYKGHSDQVNMI--KFSPDGKWLVTASEDTTIKLWDLTMGKLFQE----- 180
Query: 197 SSKFSKNTA-VWCVAFCA-DFTIITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSE 254
F +T V + F +F + +G S V+FWD +T S + +++
Sbjct: 181 ---FKNHTGGVTGIEFHPNEFLLASGSSDRTVQFWDLETFQLVSSTSPGASAVRSISFHP 237
Query: 255 DENYLYCAGVD 265
D +YL+C+ D
Sbjct: 238 DGSYLFCSSQD 248
|
Participates in a complex which severs microtubules in an ATP-dependent manner. May act to target the enzymatic subunit of this complex to sites of action such as the centrosome. Microtubule severing may promote rapid reorganization of cellular microtubule arrays and the release of microtubules from the centrosome following nucleation. Strongylocentrotus purpuratus (taxid: 7668) |
| >sp|Q54PE0|PWP2_DICDI Periodic tryptophan protein 2 homolog OS=Dictyostelium discoideum GN=pwp2 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 53.9 bits (128), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 94/213 (44%), Gaps = 16/213 (7%)
Query: 120 HKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCA--AA 177
H K +LL G G L+++ LY+ L+ I +A +++G++L GC+
Sbjct: 282 HLKSKLLLVGFSTGQFILYEMPGFNQLYK--LNISSHGISTSAINNTGEWLAFGCSELGQ 339
Query: 178 VRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADF-TIITGDSGGFVRFWDGKTGVQ 236
+ VW+ I K + ++ NT VA+ D TI TG G V+ W+ +G
Sbjct: 340 LLVWEWRSETYILKQ---QGHSYNMNT----VAYSPDGQTIATGGEDGKVKIWNTTSGYC 392
Query: 237 WSDVKTHKKDILALTVS--EDENYLYCAGVDPTVVCFQ--RTRKPQVCSTSGPEQGSSVW 292
+ H+ + A+ S +N ++ AGVD T+ F R R + + Q S +
Sbjct: 393 YITFTEHEGPVTAVKYSPVSSQNVVFSAGVDGTIRAFDLVRYRNFRTFVSPNKTQFSCLA 452
Query: 293 VRSVNRVIHEGDVKSLALHGNRLYSGGLDSYLS 325
V +I G + S ++ + +G L LS
Sbjct: 453 VDPSGEIIAAGSLDSFEIYVWSVRTGRLTDILS 485
|
Dictyostelium discoideum (taxid: 44689) |
| >sp|Q42384|PRL1_ARATH Protein pleiotropic regulatory locus 1 OS=Arabidopsis thaliana GN=PRL1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 96/247 (38%), Gaps = 66/247 (26%)
Query: 29 INCIACEPKSSRLAVSRADQSIEIWDISE-------TPHVDRVFIGDPLSNSIECLTWFN 81
+ +A +P + AD++I+IWD++ T H+++V G +SN +
Sbjct: 179 VRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIEQVR-GLAVSNR-------H 230
Query: 82 DRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQIS 141
+FS G D +++ CW L +K R + GH++
Sbjct: 231 TYMFSAG--------DDKQVK-----------CWDLEQNKVIR-----SYHGHLS----- 261
Query: 142 DEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAAAV-RVWDIHKGHAIHKMSLDKSSKF 200
+ C A H + D L+TG +V RVWDI I +S
Sbjct: 262 ---------------GVYCLALHPTLDVLLTGGRDSVCRVWDIRTKMQIFALS------G 300
Query: 201 SKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLY 260
NT D ++TG ++FWD + G S + HKK + A+T+ EN
Sbjct: 301 HDNTVCSVFTRPTDPQVVTGSHDTTIKFWDLRYGKTMSTLTHHKKSVRAMTLHPKENAFA 360
Query: 261 CAGVDPT 267
A D T
Sbjct: 361 SASADNT 367
|
Pleiotropic regulator of glucose, stress and hormone responses. Also regulates cytochrome P450 CYP90A1/CPD. Coordinates the expression of hormone- and stress-related genes and genes related to cell wall modification and growth, leading to altered sugar-dependent growth and developmental responses. Component of the MAC complex that probably regulates defense responses through transcriptional control and thereby is essential for plant innate immunity. By suppressing the expression of several (1)O(2)-responsive genes, PRL1 seems to play a major role in modulating responses of plants to environmental changes by interconnecting (1)O(2)-mediated retrograde signaling with other signaling pathways. Acts as negative regulator of SNF1-related protein kinases AKIN10 and AKIN11 via the inhibition of their interaction with SKP1/ASK1. Component of the CUL4-RBX1-DDB1-PRL1 E3 ubiquitin-protein ligase complex, PRL1 may function as the substrate recognition module within this complex, leading to the AKIN10 degradation. Arabidopsis thaliana (taxid: 3702) |
| >sp|Q26613|EMAP_STRPU 77 kDa echinoderm microtubule-associated protein OS=Strongylocentrotus purpuratus GN=EMAP PE=2 SV=1 | Back alignment and function description |
|---|
Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 75/362 (20%), Positives = 142/362 (39%), Gaps = 46/362 (12%)
Query: 148 EKLLDRQ--QGRILCTAWHSSGD-YLVTGCAAAVRVWDIHKGHAIHKMSLDKSSKFSKNT 204
+KL D + Q +L +H D ++T + W+ G + K + K+ K
Sbjct: 233 KKLSDTKSSQDPVLACEYHPMNDEQIITLGKGHIHFWNTTGGKLVKKSGI--FEKYDKPK 290
Query: 205 AVWCVAFCADFTIITGDSGGFVRFWD-GKTGVQWSDVKTHKKDILALTVSEDENYLYCAG 263
V +AF + +ITGDS G + W G T + + + H+ I +L V D L G
Sbjct: 291 FVLSLAFTGNGDVITGDSNGNMYIWGKGNTRISQAILGAHEGGIFSLCVMNDGQILSGGG 350
Query: 264 VDPTVVC----FQRTRKPQVCSTSGP------EQGSSVWVRSVNRVIHEGDVKSLALHGN 313
D V+ +Q++ QV +GP +G +V + I G+ + N
Sbjct: 351 KDKKVILWTADYQQSEVTQVTEATGPVRTLCKGKGEDFYVGTTRNAILSGN---MGGEFN 407
Query: 314 RLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSL---G 370
L + L+ +P + L ++ D ++ + H +W+
Sbjct: 408 TLVQAHTEELWGLALHPTQGLF-----------LTCGYDKNVIMWDFEQHKPMWNKLMED 456
Query: 371 SAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSV--------VSNDGKYVAYST 422
QS + + S + + + + + T+ S DG ++A ++
Sbjct: 457 GCQSAGFHPSGAVVAIGMTSGRWVALDVESQDLITVHTDGKEQHDIIRYSPDGNFLAVAS 516
Query: 423 -ESCVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVLISADSTLLLAVSLNGPLYIIDL 481
++ + ++S+ +G K S++ S TH+ SADST L + S + L D
Sbjct: 517 HDNYIYIYSVTEEGRK--YSKVGKCSG--HSSFVTHIDWSADSTKLQSNSGDYELLFWDA 572
Query: 482 SS 483
++
Sbjct: 573 AT 574
|
May modify the assembly dynamics of microtubules, such that microtubules are slightly longer, but more dynamic. Strongylocentrotus purpuratus (taxid: 7668) |
| >sp|O02482|UNC37_CAEEL Transcription factor unc-37 OS=Caenorhabditis elegans GN=unc-37 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 76/181 (41%), Gaps = 20/181 (11%)
Query: 148 EKLLDRQQGRILCTAWHSSGDYLV-TGCAAAVRVWDIHKGH-----AIHKMSLDKSSKFS 201
+K ++ G ++C A S + V TG V++WD+ + +++ +
Sbjct: 314 KKKMELNHGEVVCAATISRDNSRVYTGGKGCVKIWDVKESDISGATVVNRPPIASLDCLK 373
Query: 202 KNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYC 261
+N C F T++ G V WD T + D++T + AL +S DE L+
Sbjct: 374 ENYIRSCKLFEDGNTLLIGGEASTVALWDLTTETKTLDLETDSQACYALAMSPDEKLLFA 433
Query: 262 AGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALHGNRLYSGGLD 321
D ++ + K +V + G + G+S L+ G +L+SGGLD
Sbjct: 434 CLADGNILIYDIHNKVKVGTLPGHQDGASCL--------------DLSKDGTKLWSGGLD 479
Query: 322 S 322
+
Sbjct: 480 N 480
|
Transcription factor that functions with the neural specificity gene unc-4 to govern motor neuron identity. Caenorhabditis elegans (taxid: 6239) |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 708 | ||||||
| 91078406 | 679 | PREDICTED: similar to conserved hypothet | 0.923 | 0.963 | 0.378 | 1e-138 | |
| 321476030 | 705 | hypothetical protein DAPPUDRAFT_97204 [D | 0.936 | 0.940 | 0.4 | 1e-136 | |
| 350410231 | 685 | PREDICTED: cirhin-like [Bombus impatiens | 0.937 | 0.969 | 0.374 | 1e-131 | |
| 328697727 | 655 | PREDICTED: cirhin-like [Acyrthosiphon pi | 0.915 | 0.989 | 0.369 | 1e-130 | |
| 383848155 | 687 | PREDICTED: cirhin-like [Megachile rotund | 0.936 | 0.965 | 0.375 | 1e-130 | |
| 340719822 | 685 | PREDICTED: LOW QUALITY PROTEIN: cirhin-l | 0.937 | 0.969 | 0.371 | 1e-130 | |
| 328779134 | 687 | PREDICTED: cirhin-like [Apis mellifera] | 0.940 | 0.969 | 0.371 | 1e-128 | |
| 380028830 | 687 | PREDICTED: cirhin-like [Apis florea] | 0.940 | 0.969 | 0.371 | 1e-128 | |
| 332031585 | 687 | Cirhin [Acromyrmex echinatior] | 0.942 | 0.970 | 0.372 | 1e-128 | |
| 322802261 | 687 | hypothetical protein SINV_03216 [Solenop | 0.937 | 0.966 | 0.363 | 1e-127 |
| >gi|91078406|ref|XP_974522.1| PREDICTED: similar to conserved hypothetical protein [Tribolium castaneum] gi|270003991|gb|EFA00439.1| hypothetical protein TcasGA2_TC003293 [Tribolium castaneum] | Back alignment and taxonomy information |
|---|
Score = 499 bits (1285), Expect = e-138, Method: Compositional matrix adjust.
Identities = 267/705 (37%), Positives = 425/705 (60%), Gaps = 51/705 (7%)
Query: 4 MCKKRNTMGTYGVHNIKFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDR 63
M K RN +HN++FY P+P + C+A +P+ ++LAVSRAD S+EIW+++ ++R
Sbjct: 1 MSKPRNPK----IHNVRFYKPKPNAVYCMALQPQGNKLAVSRADASVEIWNLTHCAFIER 56
Query: 64 VFIGDPLSNSIECLTWFNDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKK 123
+ SIE L W +DRLFS GL G + EYD+ +L++KS + VT +CL V+K+K
Sbjct: 57 TIASSTENFSIEGLAWCDDRLFSVGLHGLLIEYDLMKLDLKSRSVVTGEAAFCLDVNKEK 116
Query: 124 RLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAAAVRVWDI 183
+A GTEQG++N+FQI+++ +L+EK LD+Q+GRILC + +SG+++V+G A+R+W +
Sbjct: 117 TQIAIGTEQGYLNIFQITEDEVLFEKFLDKQEGRILCLKFDNSGEFIVSGSMDAIRIWSV 176
Query: 184 HKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVKTH 243
A+HKM + ++ +K T VWC+A DFT+I+GDS G + WDGK G Q ++H
Sbjct: 177 KTNQALHKM-IPGRAEHNKPTIVWCLAITQDFTVISGDSRGILTVWDGKVGAQLESYQSH 235
Query: 244 KKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEG 303
+ DIL+L +SEDEN LYCAG+DP VV + R + G+ WVRS+ R IH+
Sbjct: 236 RADILSLCLSEDENSLYCAGIDPNVVNYVRIE---------VKDGAHKWVRSIQRKIHDH 286
Query: 304 DVKSLALHGNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSH 363
DV++L L+GN+LYS G+D YL+ SY+PPKTL+KYP L Q+ V++ ++V+L+Y
Sbjct: 287 DVRALVLNGNKLYSSGVDGYLTCSYHPPKTLLKYPPIL-QNPCVTICAKGRYVMLRYPKL 345
Query: 364 LELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAV--------NNATIRCSVVSNDG 415
+E+WSLG S D H+ V PR +V + V + I CS +S+DG
Sbjct: 346 IEIWSLGEIGS-DRDKHTGLYNVE--KAPRKLVALQKVVTDDEGVEKHEGIICSTISDDG 402
Query: 416 KYVAYSTESCVRLHSLDLDGDKPQISRIKNLP---APLFKSIFTHVLISADSTLLLAVSL 472
+ YST VRL LD P++ I+ +P + FT ++ L+LA +
Sbjct: 403 TLILYSTRLGVRLLKLDCGESTPKLVPIETDGLGVSPCVSAKFTK-----NNRLILAPN- 456
Query: 473 NGPLYIIDLSSLEIKYCVDPYKSNLMSDVISLVQMSECKQYIVCADRKSHVVIW--KNGQ 530
+G L ++ +SS + + D+I L+ +S+ Q++V D + ++ +W KN Q
Sbjct: 457 SGGLQVVAISSCNAVLMQNINTETEIEDMIVLLAVSDSAQFLVGGDVRGNIAVWTLKNDQ 516
Query: 531 H--HASLPRYRKPSTAMAIHPTLSTLVTVYSDHRIVEFDLNRKAFTTFSRKLETNHPNEW 588
+ H LP+Y+ TA+AI P + LV ++++ I+E+D+NR+ T FSR L N P +
Sbjct: 517 YVFHCKLPKYKLSPTAIAIQPNSANLVVAFNNNNIIEYDMNRRELTKFSRSLAKNLPKQL 576
Query: 589 LSRQLPVLGIEFDPQDSSLIYLMDDSALCVINKNKSLAHADAKIPRLGPKVVSGDSSNST 648
SR P+ I FD + +I L DD ++ V++K K+ + ++K+ + + G+S
Sbjct: 577 TSRVSPIRNITFDSRVKDVIILHDDDSVLVVDKEKTTTNRESKVRK-----IDGES---- 627
Query: 649 HVIESKVAFHFVRRNKHLVYFGSLNDKEMLSVQVNPLSFMEKLPP 693
+ + A +++ KHLV+ ++D EM++V+VNPLS +E+LPP
Sbjct: 628 ---KEQFAVRCIKKFKHLVHLSWISDDEMVAVEVNPLSLIEQLPP 669
|
Source: Tribolium castaneum Species: Tribolium castaneum Genus: Tribolium Family: Tenebrionidae Order: Coleoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|321476030|gb|EFX86991.1| hypothetical protein DAPPUDRAFT_97204 [Daphnia pulex] | Back alignment and taxonomy information |
|---|
Score = 492 bits (1267), Expect = e-136, Method: Compositional matrix adjust.
Identities = 284/710 (40%), Positives = 415/710 (58%), Gaps = 47/710 (6%)
Query: 14 YGVHNIKFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNS 73
+ +H+ +FY EPK I+ +A E S+RLA+SR+D SIEIW++ +PH++++ G P S
Sbjct: 6 FKIHSTRFYDVEPKAIHSMAYE--SNRLALSRSDNSIEIWNLEHSPHIEKLIPGSP-EGS 62
Query: 74 IECLTWFNDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQG 133
IE L W RLFS GL GFV EYD+ L+ K+S AVTSG+ WCL+V+K LAAG+E+G
Sbjct: 63 IEALVWSKGRLFSTGLHGFVVEYDLVALSPKASYAVTSGSAWCLAVNKAHTHLAAGSEEG 122
Query: 134 HINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAAAVRVWDIHKGHAIHKMS 193
++ LF+I +EGL+Y K+ D+Q+GRIL +WHSSGD++VTG + A+RVW++ GHA++++S
Sbjct: 123 YVCLFEIFEEGLMYYKVFDKQEGRILSLSWHSSGDFIVTGSSNAIRVWNVKTGHAVNRLS 182
Query: 194 LDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVS 253
L ++ F K T VWCV DF II+GDS G FW+GK G +V HK D+L L +S
Sbjct: 183 LGRADSF-KETLVWCVCITDDFVIISGDSRGMTSFWNGKLGTLIDEVNAHKADVLCLCLS 241
Query: 254 EDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALHGN 313
ED+ LY AGVDP +V F R T+G W+RSV R IH DV+SLAL G+
Sbjct: 242 EDQKTLYSAGVDPVIVLFARV-------TAGVRNQ---WIRSVQRAIHTHDVRSLALAGS 291
Query: 314 RLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQ 373
+L SGG+D+YL +S YPPK L +YP L Q+ V +A+ + +LL+Y + L++W LG+A
Sbjct: 292 KLISGGVDAYLCISSYPPKALNRYP-PLPQAPCVQMAQGKRQLLLRYPTSLDVWQLGAAA 350
Query: 374 STDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYSTESCVRLHSLDL 433
+ +NT + L P ++++ A ++ I C+ VS G YVAY+TES V ++
Sbjct: 351 PSVYQLSANTF-LKLSQEPARLLQLKAKDDEWIVCATVSPGGDYVAYATESNVYIYHFIQ 409
Query: 434 DGDKPQISRIKNLP----APLFKSIFTHVLISAD-STLLLAVSLNGPLYIIDLSSLEIKY 488
Q+ ++ +P + +F H D S LL + L ++D+ S
Sbjct: 410 SAGTLQLKKL--VPPEDVGTCHRMMFIHHPTEPDLSARLLLATPKLTLQLVDVGSSGSMK 467
Query: 489 CVDPYKSN----LMSDVISLVQMSECKQYIVCADRKSHVVI--WKNGQHHASLPRYRKPS 542
V + M D I L+ S + AD S++VI K+ + HA+LPRY+
Sbjct: 468 VVHTFSRESGQFTMGDCIHLMDCSADGRLAAVADHTSNIVILDLKSYKVHATLPRYKSHP 527
Query: 543 TAMAIHPTLSTLVTVYSDHRIVEFDLNRKAFTTFSRKLETNHPNEWLSRQLPVLGIEFDP 602
TA+A HP+ LV Y+DH+IVE+D+ R+ +T FS+KL P +WLSR V I FD
Sbjct: 528 TALAFHPSSHLLVVSYADHKIVEYDVIRRQYTPFSKKLSEKLPVQWLSRSCAVRHITFDV 587
Query: 603 QDSSLIYLMDDSALCVINKNKSLAHADAKIPRL---------GPKVVSGDSSNSTHVIES 653
+ +I L DDS + I+KNK + DAKI + P S + S
Sbjct: 588 RHPDVIILHDDSVIYTIDKNKEFSEPDAKITKFDTGTEDSLDAPPAPLKAPSAQQQKLNS 647
Query: 654 KVA--------FHFVRRNKHLVYFGSLN-DKEMLSVQVNPLSFMEKLPPT 694
A F ++ KHL YFG+L+ E+++V+V+PL+ + LPP
Sbjct: 648 TAAGSGPSSSCFGMSKKYKHLAYFGALDVGGELVAVEVSPLALEKHLPPA 697
|
Source: Daphnia pulex Species: Daphnia pulex Genus: Daphnia Family: Daphniidae Order: Diplostraca Class: Branchiopoda Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|350410231|ref|XP_003488988.1| PREDICTED: cirhin-like [Bombus impatiens] | Back alignment and taxonomy information |
|---|
Score = 474 bits (1220), Expect = e-131, Method: Compositional matrix adjust.
Identities = 261/697 (37%), Positives = 399/697 (57%), Gaps = 33/697 (4%)
Query: 11 MGTYGVHNIKFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPL 70
M T +HNI+FY EP+ + C++ E K+ +LA++R D SIE+W++ P V+ G P
Sbjct: 1 MSTCKIHNIRFYNLEPRSVTCLSYECKTKKLALARNDNSIEVWNVGNAPFVECTIPGHP- 59
Query: 71 SNSIECLTWFNDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGT 130
NSIE + W RLFS GL G + EYD+ L+IKS AVT G WC+ V+ KK LA GT
Sbjct: 60 ENSIENILWIGPRLFSTGLHGMITEYDLTTLSIKSEVAVTGGAAWCMDVNHKKTCLAVGT 119
Query: 131 EQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAAAVRVWDIHKGHAIH 190
E G+IN F ++ L+YE++ D+Q+GRILC W ++G+ + TG +RVW+ GHAIH
Sbjct: 120 EDGYINTFSVTPHSLIYERIFDKQKGRILCIKWDNTGEMIYTGSVDTIRVWNAVSGHAIH 179
Query: 191 KMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVKTHKKDILAL 250
KM+ + K T +WC+A D II+GDS G++ FWD G ++H D+LA+
Sbjct: 180 KMTTSRKEA-KKETIIWCLAVTDDNIIISGDSRGYLSFWDPHMGTLIESHESHTADVLAV 238
Query: 251 TVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLAL 310
T+S D N +YCAGVDP V F C + G WV+ + R +H DV++L
Sbjct: 239 TLSHDMNIVYCAGVDPVVRSF--------CKITMKSSGRPQWVKGIERRLHAHDVRALVD 290
Query: 311 HGNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSLG 370
+LYS G+D YL+ S YPPK LVKYP L Q ++ + + +LLQYT+ LELW LG
Sbjct: 291 ADGKLYSAGVDGYLAQSSYPPKILVKYP-PLLQLPCATVCRKSRCILLQYTNFLELWRLG 349
Query: 371 SAQSTDLSSHSNTTGV--PLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYSTESCVRL 428
S ST +SS S G+ L P ++++ + I ++ D K + YST+ VR+
Sbjct: 350 S--STKVSSESIRPGMVHQLEEEPIKLLQLKTKRDEHILSCAINKDAKTIVYSTDDHVRV 407
Query: 429 HSLDLDGDKPQISRIKNLPAPLFKSIFTHVLISADSTLLLAVSLNGPLYIIDLSSLEIKY 488
+ D+ Q+SR + + +L S + L + ++ + I L +E K+
Sbjct: 408 FNFDVIEGDAQLSRND---TDISATRIQKMLFSPNGKLFVTINNDEKNSTITLYKVEKKH 464
Query: 489 C--VDPYKSNLMSDV-ISLVQMSECKQYIVCADRKSHVVIW-------KNGQHHASLPRY 538
+ + +N S + + LV S ++ VCADR+ + ++ +G LP+Y
Sbjct: 465 LRHLGFFYTNKESIISVGLVCFSPDSKFFVCADRQGRIAVYNVSDTTNNDGPVAWLLPKY 524
Query: 539 RKPSTAMAIHPTLSTLVTVYSDHRIVEFDLNRKAFTTFSRKLETNHPNEWLSRQLPVLGI 598
P TAMAI LV VYSDH+I+E+++ ++ +T FS L++ P +WL+R P+ I
Sbjct: 525 SCPPTAMAIQKGTLNLVIVYSDHKIIEYNILQRQYTKFSNNLQSRLPKQWLARPFPITNI 584
Query: 599 EFDPQDSSLIYLMDDSALCVINKNKSLAHADAKIPRLGPKVVSGDSS-NSTHVIESKVAF 657
FDP++ ++I + DDS + VI+K + + KI + +GD++ ++ VI S+ F
Sbjct: 585 IFDPRNENIIIMHDDSTVYVIDKLNEFSEKETKILKRD----NGDTTEDNNSVINSQQVF 640
Query: 658 HFVRRNKHLVYFGSLNDKEMLSVQVNPLSFMEKLPPT 694
+++ KHLVY L D+E+++V+VNP+S EKLPPT
Sbjct: 641 QVLKKYKHLVYLDWLTDEELVAVEVNPISLTEKLPPT 677
|
Source: Bombus impatiens Species: Bombus impatiens Genus: Bombus Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|328697727|ref|XP_001943160.2| PREDICTED: cirhin-like [Acyrthosiphon pisum] | Back alignment and taxonomy information |
|---|
Score = 473 bits (1216), Expect = e-130, Method: Compositional matrix adjust.
Identities = 259/701 (36%), Positives = 411/701 (58%), Gaps = 53/701 (7%)
Query: 11 MGTYGVHNIKFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPL 70
MG++ VH + F++PE I C+ E ++ +LAV R++ SIE+WD+S PH+DRV I D
Sbjct: 1 MGSFDVHRVNFFSPELLSIQCMVIESETQKLAVGRSNASIEVWDVSYKPHIDRVLICD-- 58
Query: 71 SNSIECLTWFNDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGT 130
+S+E L W+N RLFS G V E+D+ L+ + VTSG+CWC+++HK LAAGT
Sbjct: 59 -SSVEGLAWYNGRLFSCSANGTVTEHDLHSLSPLYNKTVTSGSCWCIAIHKNSGRLAAGT 117
Query: 131 EQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAAAVRVWDIHKGHAIH 190
+ G+IN+F+I+ +GL Y++L+D+Q+G+I C +W SSG++LVTG A+R++ GHA+H
Sbjct: 118 QDGYINIFEITSDGLTYDRLMDKQEGKINCISWDSSGEWLVTGSINALRIYSRRSGHALH 177
Query: 191 KMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVKTHKKDILAL 250
K+ ++ T V +A DFTII+ DS G + FWDG G ++ + K L +
Sbjct: 178 KLPTGQT-----ETIVSSIAVTNDFTIISADSRGKLCFWDGNKGTNIANYQALKSIALTV 232
Query: 251 TVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLAL 310
+ E + +YC+GVDP +VC++ + S + WVRSV V H +V+SL
Sbjct: 233 CLDESQTKVYCSGVDPLIVCYEL-----ISMKSDMSLECNKWVRSVQLVAHTVEVRSLVH 287
Query: 311 HGNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSLG 370
+L+SGG+D YLS+S YPPK +VKYP + S+ +SLA + ++VL+ + SHL++W LG
Sbjct: 288 FKGKLFSGGIDGYLSVSSYPPKHMVKYPPLM--SSTISLASEARYVLMLHLSHLDVWYLG 345
Query: 371 SAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYSTESCVRLHS 430
D + N +V + N +RCS +S DG +V YSTE +++ S
Sbjct: 346 -----DKHKYENKLSK--------LVTIKYSKNDYVRCSAISPDGTWVVYSTEEKLKIFS 392
Query: 431 LDLDGDKPQISRIKNLPAPLFKSIFTHVLISADSTLL-LAVSLNGPLYIIDLS---SLEI 486
L +D + K P+ + T + S+DS L A L +++S L
Sbjct: 393 LIMDSATCEPMIKKTGIQPVECDVSTQLAFSSDSKYLWFATKHENTLVCLEMSHKFDLST 452
Query: 487 KYCVD--PYKSNLMSDVISLVQMSECKQYIVCADRKSHVVIWKNGQHHASLPRYRKPSTA 544
KYC+D PY D+I L+++S+ +Y+V ADRKS++V++ G+H+ +LP+Y T+
Sbjct: 453 KYCIDTTPY----FKDLIHLLEVSKWNKYVVAADRKSNIVVFNEGKHYCTLPKYHCSPTS 508
Query: 545 MAIHPTLSTLVTVYSDHRIVEFDLNRKAFTTFSRKLETNHPNEWLSRQLPVLGIEFDPQD 604
M IHPT LV Y++ +VE++L+R+ +T FS +L N P+E ++R P+ I FD
Sbjct: 509 MKIHPTTENLVIAYANRNVVEYNLSRQEYTDFSEQLFLNPPSELINRSFPINCITFDASR 568
Query: 605 SSLIYLMDDSALCVINKNKSLAH-ADAKIPRLGPKVVSGDSSNSTHVIESKVAFHFVRRN 663
+ I DD+ +CV+ K+++ + + KI +L K + K + ++
Sbjct: 569 NDSIIFSDDNTICVLTKDENNSKDPEKKIKKLESKPI-------------KFSLKIIQNY 615
Query: 664 KHLVYFGSLNDKEMLSVQVNPLSFMEKLPPTWTLTLVVGLT 704
+HLV+F LN +E+++V+VNP SF+EKLP + L G+T
Sbjct: 616 EHLVFFDFLNREELVAVEVNPCSFVEKLPAVYKKKL-FGMT 655
|
Source: Acyrthosiphon pisum Species: Acyrthosiphon pisum Genus: Acyrthosiphon Family: Aphididae Order: Hemiptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|383848155|ref|XP_003699717.1| PREDICTED: cirhin-like [Megachile rotundata] | Back alignment and taxonomy information |
|---|
Score = 472 bits (1215), Expect = e-130, Method: Compositional matrix adjust.
Identities = 263/700 (37%), Positives = 406/700 (58%), Gaps = 37/700 (5%)
Query: 11 MGTYGVHNIKFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPL 70
M + +HN++FY EP+ + C++ E K+ +LA++R D SIE+W++ P V+ IG
Sbjct: 1 MSSCKIHNVRFYNLEPRSVTCLSYESKTKKLALARNDNSIEVWNVGNAPFVE-CTIGGHA 59
Query: 71 SNSIECLTWFNDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGT 130
NSIE + W RLFS GL G + EY++ L++K+ AVT G WC+ V+ ++ LA GT
Sbjct: 60 ENSIESILWIGPRLFSTGLHGMITEYNLSTLSVKNEVAVTGGAAWCMDVNHQQTCLAVGT 119
Query: 131 EQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAAAVRVWDIHKGHAIH 190
E G+IN F ++ + L+YE++ D+Q+GRILC W ++G+ + +G +RVW+ GHAIH
Sbjct: 120 EDGYINTFTVNPDVLMYERIFDKQKGRILCIKWDNTGEMIYSGSVDTIRVWNAISGHAIH 179
Query: 191 KMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVKTHKKDILAL 250
KM+ + K T +WC+ D II+GDS G + FWD G ++H DILA+
Sbjct: 180 KMTTGRKEA-KKETIIWCLEVTDDNVIISGDSRGCLSFWDPHMGTLIESHESHTADILAV 238
Query: 251 TVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLAL 310
T+S D N +YCAGVDP V F + S G + WV+ + R +H DV++L
Sbjct: 239 TLSHDGNTVYCAGVDPVVRSFSK--------ISMKSTGRAQWVKGIERRLHAHDVRALVE 290
Query: 311 HGNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSLG 370
+LYS G+D YL+ S YPPK LVKYP L Q ++ + + +LL+YT+ LELW LG
Sbjct: 291 ADGKLYSAGVDGYLAQSSYPPKVLVKYP-PLLQPPCATVCRKSRCILLRYTNFLELWRLG 349
Query: 371 SAQSTDLSSHSNTTGV--PLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYSTESCVRL 428
S ST + S G+ L P ++++ + +I ++ D K + YST++ VR+
Sbjct: 350 S--STKVPPESVRPGMFHQLEEEPLKLLQLKTKRDESIISCAINKDSKTIVYSTDNHVRV 407
Query: 429 HSLDLDGDKPQISRIKNLPAPLFKSIFTHVLISADSTLLLAVSLNGPLYIIDLSSLEIKY 488
+ D+ Q+S+ + + +L S + L L ++ NG ++ L +E K
Sbjct: 408 FNFDVVEGDAQLSKND---TDVSVNRIQKMLFSPNGKLFLTINNNGKKNVVTLYKVEKKR 464
Query: 489 C--VDPYKSNLMSDV-ISLVQMSECKQYIVCADRKSHVVIWKNGQHHAS--------LPR 537
+ + +N S V + LV +S +Y VCADR+ + ++ N AS LP+
Sbjct: 465 LRHLGSFHTNKESIVDVGLVCISPDSKYFVCADRQGSIAVY-NFSETASIDAPMAWLLPK 523
Query: 538 YRKPSTAMAIHPTLSTLVTVYSDHRIVEFDLNRKAFTTFSRKLETNHPNEWLSRQLPVLG 597
Y P TAMAI LV VYSDH+IVE+++ ++ FT FS L++ P +WL+R P+
Sbjct: 524 YSCPPTAMAIQKNTLNLVIVYSDHKIVEYNILQRQFTKFSNSLQSRLPKQWLARPFPITN 583
Query: 598 IEFDPQDSSLIYLMDDSALCVINKNKSLAHADAKIPRLGPKVVSGD-SSNSTHVI--ESK 654
I FDP++ ++I + DDS + VI+K L+ +AKI PK +GD + + T +I S+
Sbjct: 584 IIFDPRNENIIIMHDDSTVYVIDKLNELSENNAKI----PKRENGDITEDGTSIIGSHSQ 639
Query: 655 VAFHFVRRNKHLVYFGSLNDKEMLSVQVNPLSFMEKLPPT 694
AF +++ KHLVY LND+E+++V+VNP+S EKLPPT
Sbjct: 640 QAFQVLKKYKHLVYLDWLNDEELVAVEVNPISLTEKLPPT 679
|
Source: Megachile rotundata Species: Megachile rotundata Genus: Megachile Family: Megachilidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|340719822|ref|XP_003398344.1| PREDICTED: LOW QUALITY PROTEIN: cirhin-like [Bombus terrestris] | Back alignment and taxonomy information |
|---|
Score = 472 bits (1215), Expect = e-130, Method: Compositional matrix adjust.
Identities = 259/697 (37%), Positives = 399/697 (57%), Gaps = 33/697 (4%)
Query: 11 MGTYGVHNIKFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPL 70
M T +HNI+FY EP+ + C++ E K+ +LA++R D SIE+W++ P V+ G P
Sbjct: 1 MSTCKIHNIRFYNLEPRSVTCLSYECKTKKLALARNDNSIEVWNVGNAPFVECTIPGHP- 59
Query: 71 SNSIECLTWFNDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGT 130
NSIE + W RLFS GL G + EYD+ L+IKS AVT G WC+ V+ KK LA GT
Sbjct: 60 ENSIENILWIGPRLFSTGLHGMITEYDLTTLSIKSEVAVTGGAAWCMDVNHKKTCLAVGT 119
Query: 131 EQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAAAVRVWDIHKGHAIH 190
E G+IN F ++ L+YE++ D+Q+GRILC W ++G+ + TG +RVW+ GHAIH
Sbjct: 120 EDGYINTFSVTPHSLIYERIFDKQKGRILCIKWDNTGEMIYTGSVDTIRVWNAISGHAIH 179
Query: 191 KMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVKTHKKDILAL 250
KM+ + K T +WC+A D II+GDS G++ FWD G ++H D+LA+
Sbjct: 180 KMTTSRKEA-KKETIIWCLAVTDDNIIISGDSRGYLSFWDPHMGTLIESHESHTADVLAV 238
Query: 251 TVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLAL 310
T+S D N +YCAGVDP V F C + G WV+ + R +H DV++L
Sbjct: 239 TLSHDMNIVYCAGVDPVVRSF--------CKITMKSSGRPQWVKGIERRLHAHDVRALVE 290
Query: 311 HGNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSLG 370
+LYS G+D YL+ S YPPK LVKYP L Q ++ + + +LL+YT+ LELW LG
Sbjct: 291 ADGKLYSAGVDGYLAQSSYPPKILVKYP-PLLQLPCATVCRKSRCILLRYTNFLELWRLG 349
Query: 371 SAQSTDLSSHSNTTGV--PLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYSTESCVRL 428
S T +SS + G+ L P ++++ + I ++ D K + YST+ VR+
Sbjct: 350 SP--TKVSSDTIRPGMVHQLEEEPIKLLQLKTKRDEHILSCAINKDAKTIVYSTDDHVRV 407
Query: 429 HSLDLDGDKPQISRIKNLPAPLFKSIFTHVLISADSTLLLAVSLNGPLYIIDLSSLEIKY 488
+ D+ Q+SR + + +L S + L + ++ + I L +E K+
Sbjct: 408 FNFDVIEGDAQLSRND---TDISATRIQKMLFSPNGKLFVTINNDEKNSTITLYKVEKKH 464
Query: 489 C--VDPYKSNLMSDV-ISLVQMSECKQYIVCADRKSHVVIW-------KNGQHHASLPRY 538
+ + +N S + + LV S +++VCADR+ + ++ +G LP+Y
Sbjct: 465 LRHLGXFYTNKESIISVGLVCFSPDSKFLVCADRQGRIAVYNVSDTTNNDGPVAWLLPKY 524
Query: 539 RKPSTAMAIHPTLSTLVTVYSDHRIVEFDLNRKAFTTFSRKLETNHPNEWLSRQLPVLGI 598
P TAMAI LV VYSDH+I+E+++ ++ +T FS L++ P +WL+R P+ I
Sbjct: 525 SCPPTAMAIQKDTLNLVIVYSDHKIIEYNILQRQYTKFSNNLQSRLPKQWLARPFPITNI 584
Query: 599 EFDPQDSSLIYLMDDSALCVINKNKSLAHADAKIPRLGPKVVSGDSS-NSTHVIESKVAF 657
FDP++ ++I + DDS + VI+K + + KI K +GD++ ++ VI S+ F
Sbjct: 585 IFDPRNENIIIMHDDSTVYVIDKLNEFSEKETKI----LKRENGDTTEDNNSVINSQQVF 640
Query: 658 HFVRRNKHLVYFGSLNDKEMLSVQVNPLSFMEKLPPT 694
+++ KHLVY L D+E+++V+VNP+S EKLPPT
Sbjct: 641 QVLKKYKHLVYLDWLTDEELVAVEVNPISLTEKLPPT 677
|
Source: Bombus terrestris Species: Bombus terrestris Genus: Bombus Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|328779134|ref|XP_003249595.1| PREDICTED: cirhin-like [Apis mellifera] | Back alignment and taxonomy information |
|---|
Score = 467 bits (1201), Expect = e-128, Method: Compositional matrix adjust.
Identities = 259/697 (37%), Positives = 399/697 (57%), Gaps = 31/697 (4%)
Query: 11 MGTYGVHNIKFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPL 70
M + +HNI+FY EP+ C++ E K+ RL ++R+D SIE+W++ P V+ G
Sbjct: 1 MSSCKIHNIRFYNLEPRSATCLSYESKTKRLTLARSDNSIEVWNVGNAPFVECTIPGHT- 59
Query: 71 SNSIECLTWFNDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGT 130
NS+E + W RLFS GL G V EY++ L+IKS AVT G WC+ V+ K LA GT
Sbjct: 60 ENSVESILWIGPRLFSTGLHGMVAEYNLTTLSIKSEVAVTGGAAWCMDVNHKNTCLAVGT 119
Query: 131 EQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAAAVRVWDIHKGHAIH 190
E G+IN F ++ + L+YE++ D+Q+GRILC W ++G+ + TG +RVW+ GHAIH
Sbjct: 120 EDGYINTFTVTCDALIYERIFDKQKGRILCIKWDNTGEMIYTGSTDTIRVWNAISGHAIH 179
Query: 191 KMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVKTHKKDILAL 250
KM+ + K T +WC+ D II+GDS G + FWD G ++H DILA+
Sbjct: 180 KMTTSRKEA-KKETIIWCLEVTDDNIIISGDSRGCLSFWDPHMGTLIESHESHTADILAV 238
Query: 251 TVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLAL 310
T+S D N +YCAGVDP V F C + G WV+ + R +H DV++L
Sbjct: 239 TLSHDMNIVYCAGVDPVVRSF--------CKITMKSSGRPQWVKGIERRLHAHDVRALVE 290
Query: 311 HGNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSLG 370
+LYS G+D YL+ S YPPK LVKYP L Q ++ K + +LL+Y + LELW LG
Sbjct: 291 ADGKLYSAGVDGYLAQSSYPPKVLVKYP-PLLQIPCATVCKKSRCILLRYPNFLELWRLG 349
Query: 371 SAQSTDLSSHSNTTGV--PLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYSTESCVRL 428
S ST +SS S G+ L P ++++ + I ++ D K + YST+S VR+
Sbjct: 350 S--STKVSSESIRPGMLYQLEEEPIKLLQLKTKKDENIISCAINKDSKTIVYSTDSHVRV 407
Query: 429 HSLD-LDGDKPQISRIKNLPAPLFKSIFTHVLISADSTLLLAVSLNGPLYIIDLSSLEIK 487
+ D ++GD + ++ A + + L S + L + V+ +G I+ L +E K
Sbjct: 408 FNFDVIEGDAQLLRNDTDISANRIQKM----LFSPNGKLFVTVNNDGKKNIVTLYKVEKK 463
Query: 488 YC--VDPYKSNLMSDV-ISLVQMSECKQYIVCADRKSHVVIWKNGQHHAS-------LPR 537
+ + + +N S + + L+ S +Y+VCAD + ++ + ++ LP+
Sbjct: 464 HLRHLGSFYTNKESIINVGLMCFSPDSKYLVCADYHGRIAVYNISETVSNDTSEAWLLPK 523
Query: 538 YRKPSTAMAIHPTLSTLVTVYSDHRIVEFDLNRKAFTTFSRKLETNHPNEWLSRQLPVLG 597
Y PSTAMAI LV VYSDH+IVE+++ +K +T FS L++ P +WL+R P+
Sbjct: 524 YSCPSTAMAIQKDTLNLVIVYSDHKIVEYNILQKQYTKFSNNLQSRLPKQWLARPFPITN 583
Query: 598 IEFDPQDSSLIYLMDDSALCVINKNKSLAHADAKIPRLGPKVVSGDSSNSTHVIESKVAF 657
I FDP++ ++I + DDS + +I+K + + KI + ++ D SNS +S+ F
Sbjct: 584 IIFDPRNENIIIMHDDSTVYIIDKLNEFSERETKILKRENGDLNED-SNSFISWQSQQVF 642
Query: 658 HFVRRNKHLVYFGSLNDKEMLSVQVNPLSFMEKLPPT 694
+++ KHL+Y LND+E+++V+VNP+S EKLPPT
Sbjct: 643 QVLKKYKHLIYLDWLNDEELVAVEVNPMSLTEKLPPT 679
|
Source: Apis mellifera Species: Apis mellifera Genus: Apis Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|380028830|ref|XP_003698089.1| PREDICTED: cirhin-like [Apis florea] | Back alignment and taxonomy information |
|---|
Score = 466 bits (1199), Expect = e-128, Method: Compositional matrix adjust.
Identities = 259/697 (37%), Positives = 398/697 (57%), Gaps = 31/697 (4%)
Query: 11 MGTYGVHNIKFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPL 70
M + +HNI+FY EP+ C++ E K+ RL ++R+D SIE+W++ P V+ G
Sbjct: 1 MSSCKIHNIRFYNLEPRSATCLSYESKTKRLTLARSDNSIEVWNVGNAPFVECTIPGHT- 59
Query: 71 SNSIECLTWFNDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGT 130
NS+E + W RLFS GL G V EY++ L+IKS AVT G WC+ V+ K LA GT
Sbjct: 60 ENSVESILWIGPRLFSTGLHGMVAEYNLTTLSIKSEVAVTGGAAWCMDVNHKNTCLAVGT 119
Query: 131 EQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAAAVRVWDIHKGHAIH 190
E G+IN F ++ E L+YE++ D+Q+GRILC W ++G+ + TG +RVW+ GHAIH
Sbjct: 120 EDGYINTFTVTCEALIYERIFDKQKGRILCIKWDNTGEMIYTGSTDTIRVWNAISGHAIH 179
Query: 191 KMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVKTHKKDILAL 250
KM+ + K T +WC+ D II+GDS G + FWD G ++H DILA+
Sbjct: 180 KMTTSRKEA-KKETIIWCLEVTDDNIIISGDSRGCLSFWDPHMGTLIESHESHTADILAV 238
Query: 251 TVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLAL 310
T+S D N +YCAGVDP V F C + G WV+ + R +H DV++L
Sbjct: 239 TLSHDMNIVYCAGVDPVVRSF--------CKITMKSSGRPQWVKGIERRLHAHDVRALVE 290
Query: 311 HGNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSLG 370
+LYS G+D YL+ S YPPK LVKYP L Q ++ + + +LL+Y + LELW LG
Sbjct: 291 ADGKLYSAGVDGYLAQSSYPPKVLVKYP-PLLQIPCATVCRKSRCILLRYPNFLELWRLG 349
Query: 371 SAQSTDLSSHSNTTGV--PLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYSTESCVRL 428
S ST +SS S G+ L P ++++ + I ++ D K + YST+S VR+
Sbjct: 350 S--STKVSSESIRPGMLYQLEEEPIKLLQLKTKKDENIISCAINKDSKTIVYSTDSHVRV 407
Query: 429 HSLD-LDGDKPQISRIKNLPAPLFKSIFTHVLISADSTLLLAVSLNGPLYIIDLSSLEIK 487
+ D ++GD + ++ + + L S + L + V+ +G I+ L +E K
Sbjct: 408 FNFDVIEGDAQLLRNDTDISTNRIQKM----LFSPNGKLFVTVNNDGKKNIVTLYKVEKK 463
Query: 488 YC--VDPYKSNLMSDV-ISLVQMSECKQYIVCADRKSHVVIWKNGQHHAS-------LPR 537
+ + + +N S + + L+ S +Y+VCAD + ++ + ++ LP+
Sbjct: 464 HLRHLGSFYTNKESIINVGLMCFSPDSKYLVCADYHGRIAVYNISETVSNDMSEAWLLPK 523
Query: 538 YRKPSTAMAIHPTLSTLVTVYSDHRIVEFDLNRKAFTTFSRKLETNHPNEWLSRQLPVLG 597
Y PSTAMAI LV VYSDH+IVE+++ +K +T FS L++ P +WL+R P+
Sbjct: 524 YSCPSTAMAIQKDTLNLVIVYSDHKIVEYNILQKQYTKFSNNLQSRLPKQWLARPFPITN 583
Query: 598 IEFDPQDSSLIYLMDDSALCVINKNKSLAHADAKIPRLGPKVVSGDSSNSTHVIESKVAF 657
I FDP++ ++I + DDS + +I+K + + KI + ++ D SNS +S+ F
Sbjct: 584 IIFDPRNENIIIMHDDSTVYIIDKLNEFSERETKILKRENGDLNED-SNSFISWQSQQVF 642
Query: 658 HFVRRNKHLVYFGSLNDKEMLSVQVNPLSFMEKLPPT 694
+++ KHLVY LND+E+++V+VNP+S EKLPPT
Sbjct: 643 QVLKKYKHLVYLDWLNDEELVAVEVNPMSLTEKLPPT 679
|
Source: Apis florea Species: Apis florea Genus: Apis Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|332031585|gb|EGI71057.1| Cirhin [Acromyrmex echinatior] | Back alignment and taxonomy information |
|---|
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 259/696 (37%), Positives = 400/696 (57%), Gaps = 29/696 (4%)
Query: 11 MGTYGVHNIKFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPL 70
M + +HNI+FY EPK + C+ E K+ +LA++R++ SIEIW++ P ++ G
Sbjct: 1 MASNRIHNIRFYNLEPKSVTCLCHELKTKKLALARSNNSIEIWNVENAPFIECTIAGHA- 59
Query: 71 SNSIECLTWFNDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGT 130
NS+E + W + RLFS GLQG V EYD++ L++K V G WC+ V+++K LA GT
Sbjct: 60 ENSVESILWIDSRLFSTGLQGVVIEYDLKTLSVKHEAIVIGGAAWCMDVNQEKTRLAVGT 119
Query: 131 EQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAAAVRVWDIHKGHAIH 190
E G+IN F + + L+YE++ D+Q GRILC W ++G+ + TG +RVW GHAIH
Sbjct: 120 EDGYINTFTVHKDKLIYERIFDKQNGRILCIKWDNTGEMIYTGSTDTIRVWSAISGHAIH 179
Query: 191 KMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVKTHKKDILAL 250
KM K++ + T VWC+A D II+GDS GF+ FWD + GV ++H DILA+
Sbjct: 180 KMITSKNN-IKEETIVWCLAVTDDNIIISGDSLGFLSFWDPQMGVLIESHESHTADILAI 238
Query: 251 TVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLAL 310
T+S D+N +YCAGVDP V F C G WV+ + R +H DV++L
Sbjct: 239 TLSHDKNVVYCAGVDPVVRSF--------CKIIMKSSGKPQWVKGIERRLHVHDVRALVE 290
Query: 311 HGNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSLG 370
+LYS G+D YL++S YPPK LVKYP L QS + + + +LL+Y ++LELW LG
Sbjct: 291 ANGKLYSAGVDGYLAVSSYPPKNLVKYP-PLLQSPCAIICRKSRCILLRYRNYLELWRLG 349
Query: 371 SAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYSTESCVRLHS 430
SA ++ L P ++++ + +I ++ D K + YST++ VR+ +
Sbjct: 350 SATKDPPELIRSSMLHQLDEEPIKLLQLQTKGDESIISYAINKDSKTIVYSTDTHVRVFN 409
Query: 431 LDLDGDKPQISRIKNLPAPLFKSIFTHVLISADSTLLLAVSLNG-----PLYIIDLSSLE 485
D+ +SR N K I +L S + L +A++ +G L+ +D SL
Sbjct: 410 FDVVEGDAMLSR--NDTDLSMKRI-QKMLFSPNGKLFVAINNDGNENTVTLFKVDKKSLS 466
Query: 486 IKYCVDPYKSNLMSDVISLVQMSECKQYIVCADRKSHVVIWKNGQHHAS-------LPRY 538
+ K ++ + ISLV S +Y+VCADR+ + ++ G + LP+Y
Sbjct: 467 LIGSFQTTKESIEN--ISLVCFSPDNKYLVCADRQCGIAVYFIGDGITAESLKAWRLPKY 524
Query: 539 RKPSTAMAIHPTLSTLVTVYSDHRIVEFDLNRKAFTTFSRKLETNHPNEWLSRQLPVLGI 598
P+TA+A+ LV VYSDH+IVE+++ K++T FS L++ +WL+R P+ I
Sbjct: 525 SCPATAIAVQKNTLNLVIVYSDHKIVEYNVPTKSYTEFSNHLQSRLSKQWLARPFPITNI 584
Query: 599 EFDPQDSSLIYLMDDSALCVINKNKSLAHADAKIPRLGPKVVSGDSSNSTHVIESKVAFH 658
FDP++ ++I + DD ++ +INK+ L+ + KI + S + SNS +S+ F
Sbjct: 585 IFDPRNENIIIMQDDLSVYIINKSSELSEKEVKIFK-RENGESAEDSNSISSSQSQYTFQ 643
Query: 659 FVRRNKHLVYFGSLNDKEMLSVQVNPLSFMEKLPPT 694
++ KHLVY LND+E+++V+VNP S +EKLPPT
Sbjct: 644 VAKKYKHLVYLNWLNDEELVAVEVNPTSLLEKLPPT 679
|
Source: Acromyrmex echinatior Species: Acromyrmex echinatior Genus: Acromyrmex Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|322802261|gb|EFZ22657.1| hypothetical protein SINV_03216 [Solenopsis invicta] | Back alignment and taxonomy information |
|---|
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 254/699 (36%), Positives = 401/699 (57%), Gaps = 35/699 (5%)
Query: 11 MGTYGVHNIKFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPL 70
M ++ +HN++FY E K + C++ E K+ +LA++R + SIE+W++ P V+ G
Sbjct: 1 MASHRIHNVRFYNLESKSVTCLSYESKTKKLALARNNNSIEVWNVENAPFVECTIAGHA- 59
Query: 71 SNSIECLTWFNDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGT 130
NS+E + W + RLFS GL G V EYD++ L+IK V G WC+ V++ K LA GT
Sbjct: 60 ENSVESILWIDSRLFSTGLHGAVVEYDLQTLSIKHEVMVIGGAAWCMDVNQTKTRLAVGT 119
Query: 131 EQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAAAVRVWDIHKGHAIH 190
E G+IN F + + L++E++ D+Q+GRI+C W ++G+ + TG +RVW GHAIH
Sbjct: 120 EDGYINTFTVHKDKLIFERIFDKQKGRIMCIKWDNTGEMVYTGSTDTIRVWSAMSGHAIH 179
Query: 191 KMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVKTHKKDILAL 250
KM+ +S+ K+T VWC+A D II+GDS GF+ FWD + GV ++H DILA+
Sbjct: 180 KMTTCRSN-IKKDTIVWCLAVTDDNIIISGDSQGFLCFWDPQMGVLIESHESHTADILAV 238
Query: 251 TVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLAL 310
T+S D N +YC GVDP V F C + G WV+ + R +H DV++L
Sbjct: 239 TLSHDMNVVYCTGVDPVVRSF--------CKITLKSSGRPQWVKGIERRLHVHDVRALVE 290
Query: 311 HGNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSLG 370
+LYS G+D YL++S YPPK LVKYP L Q ++ + + +LL+YT++LELW LG
Sbjct: 291 ANGKLYSAGVDGYLAVSSYPPKNLVKYP-PLLQPPCATICRKSRCILLRYTNYLELWRLG 349
Query: 371 SAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYSTESCVRLHS 430
SA ++ L P ++++ + +I V+ D K + YST++ VR+ +
Sbjct: 350 SATKEPPELVRSSMLHQLDEEPMKLLQLQTKGDESIISYAVNKDSKTIVYSTDTHVRVFN 409
Query: 431 LDLDGDKPQISRIKNLPAPLFKSIFTHVLISADSTLLLAVSLNGP-----LYIIDLSSLE 485
D+ Q+SR N K I +L S + L +A++ +G ++ +D SL
Sbjct: 410 FDVMEGDAQLSR--NDTDLSMKRI-QKMLFSPNGKLFIAINNDGSESTITVFKVDKKSLS 466
Query: 486 IKYCVDPYKSNLMSDVISLVQMSECKQYIVCADRKSHVVIWKNGQHHAS-------LPRY 538
+ K ++ + +SLV S +Y+VC DR+ V ++ G + LP+Y
Sbjct: 467 LIGSFQTTKESIKN--VSLVCFSPDSKYLVCTDRQRGVAVYFIGDGITAESLKAWQLPKY 524
Query: 539 RKPSTAMAIHPTLSTLVTVYSDHRIVEFDLNRKAFTTFSRKLETNHPNEWLSRQLPVLGI 598
P+TA+A+ + LV YSDH+IVE+++ +T FS L++ +WL+R P+ I
Sbjct: 525 SCPATAIAVQKSTLNLVIAYSDHKIVEYNIPTNNYTEFSNNLQSRLSKQWLARPFPITNI 584
Query: 599 EFDPQDSSLIYLMDDSALCVINKNKSLAHADAKIPRLGPKVVSGDSSNSTHVIESKVA-- 656
FD + +I + DDS++ +INK+ L+ + KI PK +G+S+ ++ I S +
Sbjct: 585 MFDSHNKDIIIMQDDSSVYIINKSSELSEKEIKI----PKRENGESAEDSNSISSSQSQH 640
Query: 657 -FHFVRRNKHLVYFGSLNDKEMLSVQVNPLSFMEKLPPT 694
F V++ KHLVY LND+E+++++VNP S +EKLPPT
Sbjct: 641 MFQVVKKYKHLVYLNWLNDEELVAIEVNPTSLLEKLPPT 679
|
Source: Solenopsis invicta Species: Solenopsis invicta Genus: Solenopsis Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 708 | ||||||
| UNIPROTKB|Q5R994 | 686 | DKFZp459B1739 "Putative unchar | 0.927 | 0.957 | 0.308 | 7.9e-78 | |
| UNIPROTKB|Q969X6 | 686 | CIRH1A "Cirhin" [Homo sapiens | 0.927 | 0.957 | 0.312 | 1.3e-77 | |
| ZFIN|ZDB-GENE-040426-2466 | 685 | cirh1a "cirrhosis, autosomal r | 0.932 | 0.963 | 0.288 | 2.5e-74 | |
| MGI|MGI:1096573 | 686 | Cirh1a "cirrhosis, autosomal r | 0.932 | 0.962 | 0.301 | 3.1e-74 | |
| FB|FBgn0263605 | 696 | l(3)72Dn "lethal (3) 72Dn" [Dr | 0.939 | 0.955 | 0.282 | 1.1e-73 | |
| RGD|1311341 | 686 | Cirh1a "cirrhosis, autosomal r | 0.932 | 0.962 | 0.298 | 1.6e-72 | |
| UNIPROTKB|E1BC40 | 687 | CIRH1A "Uncharacterized protei | 0.932 | 0.960 | 0.303 | 2.9e-71 | |
| SGD|S000002732 | 776 | UTP4 "Subunit of U3-containing | 0.766 | 0.699 | 0.259 | 3e-38 | |
| POMBASE|SPBC19F5.02c | 710 | utp4 "U3 snoRNP protein Utp4 ( | 0.395 | 0.394 | 0.287 | 4.9e-34 | |
| UNIPROTKB|I3LIQ3 | 372 | CIRH1A "Uncharacterized protei | 0.467 | 0.889 | 0.303 | 3.1e-31 |
| UNIPROTKB|Q5R994 DKFZp459B1739 "Putative uncharacterized protein DKFZp459B1739" [Pongo abelii (taxid:9601)] | Back alignment and assigned GO terms |
|---|
Score = 783 (280.7 bits), Expect = 7.9e-78, P = 7.9e-78
Identities = 217/703 (30%), Positives = 341/703 (48%)
Query: 11 MGTYGVHNIKFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPL 70
MG + VH ++F+ P I C+A +S+RLAVSR D ++EI+++S ++ F G
Sbjct: 1 MGEFKVHRVRFFNYVPSGIRCVAYNNQSNRLAVSRTDGTVEIYNLSANYFQEKFFPGHE- 59
Query: 71 SNSIECLTWFN-DRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAG 129
S + E L W RLFS GL G + EYD++ LNIK + G W ++ L G
Sbjct: 60 SRATEALCWAEGQRLFSAGLNGEIMEYDLQALNIKYAMDAFGGPIWSMAASPSGSQLLVG 119
Query: 130 TEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAAAVRVWDIHKGHAI 189
E G + LFQI+ + + +E+ DRQ+ RIL +WHSSG ++ G + V+D+ G A+
Sbjct: 120 CEDGSVKLFQITPDKIQFERNFDRQKSRILSLSWHSSGTHIAAGSIDYISVFDVKSGSAV 179
Query: 190 HKMSLDKS--SKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVKTH---K 244
HKM +D+ + VW VAF +D T+I+ DS G V+FWD TG VK+H
Sbjct: 180 HKMIVDRQYMGASKRKCIVWGVAFLSDGTVISVDSAGKVQFWDSATGTL---VKSHLIAN 236
Query: 245 KDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGD 304
D+ ++ V++ E+ + TV FQ P V S S +Q WVR+ H D
Sbjct: 237 ADVQSIAVADQEDSFVVGTAEGTVFHFQLV--P-VTSNSNEKQ----WVRTKPFQHHTHD 289
Query: 305 VKSLALHGNRXXXXXXXXXXXXXXXPPKTLVK-YPCTLAQST-P----VSLAKDIQHVLL 358
V+++A K VK Y L + T P +S +K Q +L
Sbjct: 290 VRTVAHSPTALISGGTDTHLVIRPLMEKVEVKNYDAALRKITFPHRCLISCSKKRQLLLF 349
Query: 359 QYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYV 418
Q+ HLELW LGS +T N +PL ++ + I CS +S G ++
Sbjct: 350 QFAHHLELWRLGSTVATG----KNGDTLPLSKNADHLLHLKTKGPENIICSCISPCGSWI 405
Query: 419 AYSTESCVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVLISADSTLLLAVSLNGPLYI 478
AYST S L+ L+ + D + R+ +PA F +L S DST L S G L+I
Sbjct: 406 AYSTVSRFFLYRLNYEHDNISLKRVSKMPA--FLRCALQILFSEDSTKLFVASNQGALHI 463
Query: 479 IDLSSLEIKY--CVDPYKSNLMSDVISLVQMSECKQYIVCADRKS--HVVIWKNGQHHAS 534
+ LS K+ P + + + L+ +S ++ + + HV K + H +
Sbjct: 464 VQLSGGSFKHLHAFQPQSGTV--EAMCLLAVSPDGHWLAASGTSAGVHVYDVKQLKLHCT 521
Query: 535 LPRYRKPSTAMAIHPTLSTLVTVYSDHRIVEFDLNRKAFTTFSRKLETNHPNE-WLSRQL 593
+P Y P TAMAI P + LV +SD ++ E+ + K +T +SR ++ + WL R
Sbjct: 522 VPAYNFPVTAMAIAPNTNNLVIAHSDQQVFEYSIPDKQYTDWSRTVQKQGFHHLWLQRDT 581
Query: 594 PVLGIEFDPQDSSLIYLMDDSALCVINKNKSLAHADAKIPRLGPKVVSGDSSNSTHVIES 653
P+ I F P+ I L D C+I+K+ L + + P +N + V+
Sbjct: 582 PITHISFHPKRPMHILLHDAYMFCIIDKSLPLPNDKTLLYNPFPP------TNESDVVRR 635
Query: 654 KVA--FHFVRRNKHLVYFGSLNDKEMLSVQVNPLS-FMEKLPP 693
+ A F + K L++ L+++ +++V+ PL + +LPP
Sbjct: 636 RTAHAFKISKIYKPLLFMDLLDERTLVAVE-RPLDDIIAQLPP 677
|
|
| UNIPROTKB|Q969X6 CIRH1A "Cirhin" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 781 (280.0 bits), Expect = 1.3e-77, P = 1.3e-77
Identities = 220/703 (31%), Positives = 343/703 (48%)
Query: 11 MGTYGVHNIKFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPL 70
MG + VH ++F+ P I C+A +S+RLAVSR D ++EI+++S ++ F G
Sbjct: 1 MGEFKVHRVRFFNYVPSGIRCVAYNNQSNRLAVSRTDGTVEIYNLSANYFQEKFFPGHE- 59
Query: 71 SNSIECLTWFN-DRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAG 129
S + E L W RLFS GL G + EYD++ LNIK + G W ++ L G
Sbjct: 60 SRATEALCWAEGQRLFSAGLNGEIMEYDLQALNIKYAMDAFGGPIWSMAASPSGSQLLVG 119
Query: 130 TEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAAAVRVWDIHKGHAI 189
E G + LFQI+ + + +E+ DRQ+ RIL +WH SG ++ G + V+D+ G A+
Sbjct: 120 CEDGSVKLFQITPDKIQFERNFDRQKSRILSLSWHPSGTHIAAGSIDYISVFDVKSGSAV 179
Query: 190 HKMSLDKSSK-FSKNTA-VWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVKTH---K 244
HKM +D+ SK VW VAF +D TII+ DS G V+FWD TG VK+H
Sbjct: 180 HKMIVDRQYMGVSKRKCIVWGVAFLSDGTIISVDSAGKVQFWDSATGTL---VKSHLIAN 236
Query: 245 KDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGD 304
D+ ++ V++ E+ + TV FQ P V S S +Q WVR+ H D
Sbjct: 237 ADVQSIAVADQEDSFVVGTAEGTVFHFQLV--P-VTSNSSEKQ----WVRTKPFQHHTHD 289
Query: 305 VKSLALHGNRXXXXXXXXXXXXXXXPPKTLVK-YPCTLAQST-P----VSLAKDIQHVLL 358
V+++A K VK Y L + T P +S +K Q +L
Sbjct: 290 VRTVAHSPTALISGGTDTHLVFRPLMEKVEVKNYDAALRKITFPHRCLISCSKKRQLLLF 349
Query: 359 QYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYV 418
Q+ HLELW LGS +T N +PL ++ + I CS +S G ++
Sbjct: 350 QFAHHLELWRLGSTVATG----KNGDTLPLSKNADHLLHLKTKGPENIICSCISPCGSWI 405
Query: 419 AYSTESCVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVLISADSTLLLAVSLNGPLYI 478
AYST S L+ L+ + D + R+ +PA L ++ +L S DST L S G L+I
Sbjct: 406 AYSTVSRFFLYRLNYEHDNISLKRVSKMPAFLRSAL--QILFSEDSTKLFVASNQGALHI 463
Query: 479 IDLSSLEIKY--CVDPYKSNLMSDVISLVQMSECKQYIVCADRKS--HVVIWKNGQHHAS 534
+ LS K+ P + + + L+ +S ++ + + HV K + H +
Sbjct: 464 VQLSGGSFKHLHAFQPQSGTV--EAMCLLAVSPDGNWLAASGTSAGVHVYNVKQLKLHCT 521
Query: 535 LPRYRKPSTAMAIHPTLSTLVTVYSDHRIVEFDLNRKAFTTFSRKLETNHPNE-WLSRQL 593
+P Y P TAMAI P + LV +SD ++ E+ + K +T +SR ++ + WL R
Sbjct: 522 VPAYNFPVTAMAIAPNTNNLVIAHSDQQVFEYSIPDKQYTDWSRTVQKQGFHHLWLQRDT 581
Query: 594 PVLGIEFDPQDSSLIYLMDDSALCVINKNKSLAHADAKIPRLGPKVVSGDSSNSTHVIES 653
P+ I F P+ I L D C+I+K+ L + + P +N + VI
Sbjct: 582 PITHISFHPKRPMHILLHDAYMFCIIDKSLPLPNDKTLLYNPFPP------TNESDVIRR 635
Query: 654 KVA--FHFVRRNKHLVYFGSLNDKEMLSVQVNPLS-FMEKLPP 693
+ A F + K L++ L+++ +++V+ PL + +LPP
Sbjct: 636 RTAHAFKISKIYKPLLFMDLLDERTLVAVE-RPLDDIIAQLPP 677
|
|
| ZFIN|ZDB-GENE-040426-2466 cirh1a "cirrhosis, autosomal recessive 1A (cirhin)" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 750 (269.1 bits), Expect = 2.5e-74, P = 2.5e-74
Identities = 201/697 (28%), Positives = 347/697 (49%)
Query: 11 MGTYGVHNIKFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPL 70
MG + VH ++F+ P I +A + R+A ++ + S+EI+ S+ +++ G
Sbjct: 1 MGEFKVHRVRFFEYVPSGIRALAFNQHNERMAAAKMNGSVEIFHCSDRFFQEKIIPGREQ 60
Query: 71 SNSIECLTWFNDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGT 130
+ IE LTW +RLFS GL G + EYD+ +K + G W ++ +++ LA G
Sbjct: 61 AG-IEGLTWVGERLFSAGLNGVITEYDLTNQRVKYTIDAYGGPIWAITGNQQGTHLAVGC 119
Query: 131 EQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAAAVRVWDIHKGHAIH 190
E G + LF+++++ + +E+ LDRQ+GRI+ +WH SG + G ++V+++ GH+ H
Sbjct: 120 EDGTVKLFEVTEDKIQFERNLDRQKGRIISLSWHPSGSKIAAGMMDMIQVFNVETGHSKH 179
Query: 191 KMSLDKSSKFS--KNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVKTHKKDIL 248
++ +D+ S K VW V + +D TII+GDS G V+ W TG K D+L
Sbjct: 180 RILVDRGYGTSRGKECVVWSVVYLSDGTIISGDSVGMVKMWRDDTGTLIKSHNITKSDVL 239
Query: 249 ALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSL 308
+L+VS++E+ + + VV FQ V E WVR+ H DV+++
Sbjct: 240 SLSVSQNEDSIVAGTSEGFVVQFQFLS--MVL-----ENNEKDWVRTRTFRNHTHDVRAV 292
Query: 309 ALHGNRXXXXXXXXXXXXXXXPPKTLVKYPCTLAQST--P----VSLAKDIQHVLLQYTS 362
A K VK + + P VS A+ +L QY
Sbjct: 293 AEITTAVVSGGMDTQLVVRPLLDKHEVKSSASKLRKIQFPHRSLVSCARKAGTLLFQYPG 352
Query: 363 HLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYST 422
HLELW LG ++ + S + L P ++ + IRCS VS G+++AYST
Sbjct: 353 HLELWRLGESEGEGIPGSS----LLLKRKPEKLLHLKVKGEDHIRCSAVSPCGEWIAYST 408
Query: 423 ESCVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVLISADSTLLLAVSLNGPLYIIDLS 482
S +RL+ L D + I++I LP L + + + S+DST L + S ++++ LS
Sbjct: 409 TSSLRLYKLHCDSNNVSITKISKLPKVLGSA--SQLCFSSDSTHLFSASTQSSVHMVSLS 466
Query: 483 SLEIKYCVDPYKSNLMS-DVISLVQMSECKQYIVCA--DRKSHVVIWKNGQHHASLPRYR 539
E K+ V +K+ S I L+ SE +++ A D + H+ + + H ++P Y
Sbjct: 467 QPECKF-VATFKTKSGSHQAIHLLAASEDGKWLASANIDNEVHIYNLQTRKAHCTVPIYS 525
Query: 540 KPSTAMAIHPTLSTLVTVYSDHRIVEFDLNRKAFTTFSRKLETNHPNE-WLSRQLPVLGI 598
+AMAIHPT + L V++D +I EF + +K +T +SR ++ + WL R P L +
Sbjct: 526 SAVSAMAIHPTTNCLFMVHADQQIFEFSIEQKEYTDWSRLVQRQGLHRIWLERDTPCLNV 585
Query: 599 EFDPQDSSLIYLMDDSALCVINKNKSLAHADAK-IPRLGPKVVSGDSSNS-THVIESKVA 656
F+ ++ S + L D C+I++++ L + ++ + +L + + + S +H A
Sbjct: 586 TFNQKNPSHVILHDMYMFCIIDQSQPLPDSKSQFLNQLTLRSLPEEQRKSYSH------A 639
Query: 657 FHFVRRNKHLVYFGSLNDKEMLSVQVNPLS-FMEKLP 692
F + K L+ + D+ ++ V+ PL +LP
Sbjct: 640 FKVCKTFKELLCVDVMGDQSLVVVE-RPLEDITAQLP 675
|
|
| MGI|MGI:1096573 Cirh1a "cirrhosis, autosomal recessive 1A (human)" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 749 (268.7 bits), Expect = 3.1e-74, P = 3.1e-74
Identities = 211/700 (30%), Positives = 337/700 (48%)
Query: 11 MGTYGVHNIKFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPL 70
MG + VH ++F+ P I C+A +S+RLAVSR D ++EI+++S ++ F G
Sbjct: 1 MGEFKVHRVRFFNYVPSGIRCVAYNNQSNRLAVSRTDGTVEIYNLSANYFQEKFFPGHE- 59
Query: 71 SNSIECLTWFN-DRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAG 129
S E L W RLFS GL G + EYD++ LNIK + G W ++ L G
Sbjct: 60 SRGTEALCWAGGQRLFSAGLNGEILEYDLQALNIKYTLDAFGGPIWSMTASPSGSQLLVG 119
Query: 130 TEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAAAVRVWDIHKGHAI 189
E G + LF+++ E + + + DRQ+ RIL WH +G ++ G + V+D+ G I
Sbjct: 120 CEDGSVKLFEVTPEKIQFARNFDRQKSRILSLCWHPAGTHVAAGSLDYISVFDVKSGSII 179
Query: 190 HKMSLDKSSK-FSKNTA-VWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVKTH---K 244
KM LD+ +K+ VW VAF +D T+I+ DS G V+ WD TG VK+H
Sbjct: 180 RKMVLDRQHLGVTKSRCIVWGVAFLSDGTVISVDSVGKVQLWDSATGTL---VKSHLVAN 236
Query: 245 KDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGD 304
D+ ++ V++ E+ + TV FQ + S S +Q WVR+ H D
Sbjct: 237 ADVQSIAVADQEDSFVVGTAEGTVFHFQLV---SMTSNSSEKQ----WVRTKPFQHHTHD 289
Query: 305 VKSLALHGNRXXXXXXXXXXXXXXXPPKTLVK-YPCTLAQST-P----VSLAKDIQHVLL 358
V+++A + VK Y L + T P +S +K Q +L
Sbjct: 290 VRAVAHSPTALISGGTDTHLVIRPLMERVEVKNYDAALRKITFPHRRLISCSKRRQLLLF 349
Query: 359 QYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYV 418
Q+ HLELW LGS +T N +PL ++ + I CS VS G ++
Sbjct: 350 QFAHHLELWRLGSTSATG----KNGDTLPLSKNADHLLHLKTKGPENIICSCVSPCGSWI 405
Query: 419 AYSTESCVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVLISADSTLLLAVSLNGPLYI 478
AYST S L+ L + D + R+ LP+ L ++ H+L S DST LL S G L+I
Sbjct: 406 AYSTASRFFLYRLKYERDNISLQRVSKLPSFLRSAL--HILFSEDSTKLLVASNQGSLHI 463
Query: 479 IDLSSLEIKYCVDPYKSNLMSDVISLVQMSECKQYIVCADRKS--HVVIWKNGQHHASLP 536
+ LS K+ + + + L+ +S ++ + + HV + + H ++P
Sbjct: 464 VHLSEGSFKHLHTFQPQSGTVEAMCLLAVSPDGNWLAASGTSAGVHVYDLHHLKLHCTVP 523
Query: 537 RYRKPSTAMAIHPTLSTLVTVYSDHRIVEFDLNRKAFTTFSRKLETNHPNE-WLSRQLPV 595
Y P TA+AI P + LV +SD ++ EF + K +T +SR L+ ++ WL R P+
Sbjct: 524 AYNFPVTALAIAPNTNNLVIAHSDQQVFEFSIPEKQYTEWSRSLQKQGFHQLWLQRDTPI 583
Query: 596 LGIEFDPQDSSLIYLMDDSALCVINKNKSLAHADAKIPR-LGPKVVSGDSSNSTHVIESK 654
I F P+ I L D C+I+K+ L + + L PK + + + +
Sbjct: 584 THISFHPKRPMHILLHDAYMFCIIDKSLPLPNEKTVLYNPLPPK-----NESDVFLRRTT 638
Query: 655 VAFHFVRRNKHLVYFGSLNDKEMLSVQVNPLS-FMEKLPP 693
F + K L++ L+++ +++V+ PL + +LPP
Sbjct: 639 HGFKMSKIYKPLLFMDLLDERTLVAVE-RPLDDIIAQLPP 677
|
|
| FB|FBgn0263605 l(3)72Dn "lethal (3) 72Dn" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 744 (267.0 bits), Expect = 1.1e-73, P = 1.1e-73
Identities = 203/718 (28%), Positives = 362/718 (50%)
Query: 1 MSHMCKKR-NTMGTYGVHNIKFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETP 59
M++ KK G + VHN++FY +P+ I +A S LA+SRA IE+W++ P
Sbjct: 1 MTNNAKKEPQQRGKHQVHNVRFYTIKPREIVSLAYSKSSKCLALSRATPVIELWNLEHAP 60
Query: 60 HVDRVFIGDPLSNSIECLTWFNDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSV 119
++DRV I P + +E + W +RLFS L G + E+D+ +L + + T W + V
Sbjct: 61 YLDRV-IHLPTDSHVESIAWAGNRLFSVDLSGKLIEWDVIKLKQRYEHSPTGNALWSIDV 119
Query: 120 HKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAAAVR 179
+ + +A G+E+GHIN+ I ++ + Y+ L ++Q+GR+LC + +G LVTG VR
Sbjct: 120 NPAETDIAIGSEEGHINILSIENDEITYKSLFNKQKGRVLCIKFDKTGTKLVTGTEGFVR 179
Query: 180 VWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSD 239
+W++ KG +H M+L + KN VW + +D TII GDS GFV WD Q
Sbjct: 180 IWNVLKGTTLHTMTLSE-----KNVIVWSLQVLSDNTIIAGDSAGFVTVWDADNATQIDS 234
Query: 240 VKTHKKDILALTVSEDENYLYCAGVDPTVV-CFQRTRKPQVCSTSGPEQGSSVWVRSVNR 298
+ K++ AL V+ E+ L C+G+ P ++ F +T+ + STS E+ W++ + R
Sbjct: 235 TRVLDKNVFALVVNNKEDRLVCSGMQPPLIRIFSKTKIKREESTS--ER----WIKFLQR 288
Query: 299 VIHEGDVKSLALHGNRXXXXXXXXXXXXXXXPP-KTLVKYPCTLAQSTPVSLAKDIQHVL 357
H+ VKSL + ++ + + + + S+A + +L
Sbjct: 289 DAHKHYVKSLLVIDDQIYSGGRDGILTITSSERMQAHLSQHAPFLKGSVASMAISKKLLL 348
Query: 358 LQYTSHLELWSLGSA--QSTDLSSH----SNTTGVPLLSFP-RLIVKMSAVNNATIRCSV 410
L+Y + + LW LGS Q D T LL P + +++++ + I+ +
Sbjct: 349 LRYPNSVHLWRLGSVAPQGEDKKKPWALPVGHTEEQLLELPPQKLLQLNVKEHNFIQSAA 408
Query: 411 VSNDGKYVAYSTESCVRLHSLDLDGDKPQISR-IKNLPAPLFKSIFTHVLISADSTLLLA 469
+S+D ++ YST +R+ L D Q+ R + +LP L + +H++ + L+L
Sbjct: 409 ISSDANWICYSTLKELRISRLK--SDPLQVERLVDDLPEELQPA--SHIIFTKQGDLVLL 464
Query: 470 VSLNGPL--YIIDLSSLEIKYCVDPYKSNLMSDVISLVQMSECKQYIVCADRKSHVV-IW 526
N L + ++ + KY +D S + IS V +S +YIV A H++ +W
Sbjct: 465 NPQNNHLSWFTLEEDLVTFKYTID--LSEKCKNTISHVVISSHGEYIVAAS-SDHIISVW 521
Query: 527 K-NGQ---HHASLPRYRKPSTAMAIHPTLSTLVTVYSDHRIVEFDLNRKAFTTFSRKLET 582
K +G+ H +LPR+R +TA+++H +V Y++ ++VE+DL + FT ET
Sbjct: 522 KLHGKQYKHLLNLPRHRAGTTALSMHEDYPRVVVAYANGQLVEYDLVNRIFTC-----ET 576
Query: 583 NHPNEWL---SRQLPVLGIEFDPQDSSLIYLMDDSALCVINKNKSLAHADAK--IPRLGP 637
N E+L +R+ + GI DPQ+ ++ + + L V+ +++ H D K +
Sbjct: 577 N---EYLIPETRRHCINGISLDPQNRNIFIVHTEGNLYVLERDQ---HLDPKELVSNSKS 630
Query: 638 KVVSGDSSNSTHVIESKVAFHFVRRNKHLVYFGSLNDKEMLSVQVNPLSFMEKLPPTW 695
K +S + +S ++ +HLV+ L+ E+++V ++ + + LPP +
Sbjct: 631 KKLSNGNRSSVDGGSKGLSLKTTLSRQHLVHVSRLSPNELVNVSISTNNLLAPLPPPY 688
|
|
| RGD|1311341 Cirh1a "cirrhosis, autosomal recessive 1A (cirhin)" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 733 (263.1 bits), Expect = 1.6e-72, P = 1.6e-72
Identities = 209/700 (29%), Positives = 336/700 (48%)
Query: 11 MGTYGVHNIKFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPL 70
MG + VH ++F+ P I C+A +S+RLAVSR D ++EI+++S ++ F G
Sbjct: 1 MGEFKVHRVRFFNYVPSGIRCVAYNNQSNRLAVSRTDGTVEIYNLSANYFQEKFFPGHE- 59
Query: 71 SNSIECLTWFN-DRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAG 129
S E L W RLFS GL G + EYD++ LNIK + G W ++ L G
Sbjct: 60 SRGTEALCWAEGQRLFSAGLNGEILEYDLQALNIKYTLDAFGGPIWSMTASPSGSQLLVG 119
Query: 130 TEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAAAVRVWDIHKGHAI 189
E G + LF+++ + + + + DRQ+ RIL +WH +G ++ G + V+D+ G
Sbjct: 120 CEDGSVKLFEVTPDKIQFARNFDRQKSRILSLSWHPAGTHVAAGSIDYISVFDVKSGSIT 179
Query: 190 HKMSLDKSSK-FSKNTA-VWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVKTH---K 244
KM LD+ +K+ VW VAF +D T+I+ DS G V+ WD TG VK+H
Sbjct: 180 RKMVLDRQHLGVTKSRCIVWGVAFLSDGTVISVDSVGKVQLWDSATGTL---VKSHLIAN 236
Query: 245 KDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGD 304
D+ ++ V++ E+ + TV FQ V S S +Q WVR+ H D
Sbjct: 237 ADVQSIAVADQEDSFVVGTAEGTVFHFQLV---SVTSNSSEKQ----WVRTKPFQHHTHD 289
Query: 305 VKSLALHGNRXXXXXXXXXXXXXXXPPKTLVK-YPCTLAQST-P----VSLAKDIQHVLL 358
V+++A K VK Y L + T P +S +K Q +L
Sbjct: 290 VRTVAHSPTALISGGTDTHLVIRPLMEKVEVKNYDAALRKITFPHRRLISCSKRRQLLLF 349
Query: 359 QYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYV 418
Q+ HLELW LGS +T N +PL ++ + I CS VS G ++
Sbjct: 350 QFAHHLELWRLGSTAATG----KNGDTLPLSKNADHLLHLKTKGPENIICSCVSPCGSWI 405
Query: 419 AYSTESCVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVLISADSTLLLAVSLNGPLYI 478
AYST S L+ L + D + R+ LPA L ++ H+L S DST L S G L++
Sbjct: 406 AYSTASRFFLYRLKYERDNISLQRVSKLPAFLRSAL--HILFSEDSTKLFVASNQGSLHV 463
Query: 479 IDLSSLEIKYCVDPYKSNLMSDVISLVQMSECKQYIVCADRKSHVVIWK--NGQHHASLP 536
I LS K+ + + + L+ +S ++ + + V I+ + + H ++P
Sbjct: 464 IHLSEGSFKHLHTFQPQSGTVEAMCLLAVSPDGNWLAASGTSAGVHIYDLHHLKLHCTVP 523
Query: 537 RYRKPSTAMAIHPTLSTLVTVYSDHRIVEFDLNRKAFTTFSRKLETNHPNE-WLSRQLPV 595
Y P TA+AI P + LV +SD ++ EF + K +T +SR ++ ++ WL R P+
Sbjct: 524 AYNFPVTALAIAPNTNNLVIAHSDQQVFEFSIPDKQYTEWSRSVQKQGFHQLWLQRDTPI 583
Query: 596 LGIEFDPQDSSLIYLMDDSALCVINKNKSLAHADAKIPR-LGPKVVSGDSSNSTHVIESK 654
I P+ I L D C+I+K+ L + + L PK + + + +
Sbjct: 584 THISIHPKRPMHILLHDAYMFCIIDKSLPLPNDKTVLYNPLPPK-----NESDVFLRRTT 638
Query: 655 VAFHFVRRNKHLVYFGSLNDKEMLSVQVNPLS-FMEKLPP 693
F + K L++ L+++ +++V+ PL + +LPP
Sbjct: 639 HGFKMSKIYKPLLFMDLLDERTLVAVE-RPLDDIIAQLPP 677
|
|
| UNIPROTKB|E1BC40 CIRH1A "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 721 (258.9 bits), Expect = 2.9e-71, P = 2.9e-71
Identities = 213/701 (30%), Positives = 331/701 (47%)
Query: 11 MGTYGVHNIKFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPL 70
MG + VH ++F+ P I C+A +S+RLAVSR D ++EI+++S ++ F G
Sbjct: 1 MGEFNVHRVRFFNYVPSGIRCVAYNNQSNRLAVSRTDGTVEIYNLSANYFQEKFFPGHE- 59
Query: 71 SNSIECLTWFN-DRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAG 129
S + E L W RLFS GL G + EYD++ L IK + G W ++ L G
Sbjct: 60 SRATEALCWAKGQRLFSAGLNGEIIEYDLQALTIKYAVDAFGGPIWSMAASPNASQLLVG 119
Query: 130 TEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAAAVRVWDIHK-GHA 188
E G + LFQI+ + + +E+ DRQ+ RIL +WH +G ++ G + V+D G A
Sbjct: 120 CEDGSVKLFQITPDKIQFERNFDRQKSRILSLSWHPAGTHVAAGSIDYISVFDSKSAGSA 179
Query: 189 IHKMSLDKSSK-FSKNTAV-WCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVKTHKKD 246
I KM +D+ SK + W VAF +D T+I+ DS G V+ WD TG + D
Sbjct: 180 IGKMLVDRQYMGVSKRKCIIWGVAFLSDGTVISVDSAGKVQIWDSATGTLVKNHLVSNAD 239
Query: 247 ILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVK 306
+ ++ VS E+ + TV FQ V S+S +Q WVR+ H DV+
Sbjct: 240 VQSIAVSPQEDSFVVGTAEGTVFHFQLV---SVTSSSSEKQ----WVRTKPFQHHTHDVR 292
Query: 307 SLALHGNRXXXXXXXXXXXXXXXPPKTLVK-YPCTLAQST-P----VSLAKDIQHVLLQY 360
++A K VK Y L + T P VS AK Q +L Q+
Sbjct: 293 AVAHSPTALISGGTDTHLVIRPLMEKVEVKNYDAALRKITFPHRRLVSCAKKKQLLLFQF 352
Query: 361 TSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAY 420
HLELW LGS +T N +PL ++ + I CS +S G ++A
Sbjct: 353 AHHLELWRLGSTVATG----KNGDTLPLSKNADHLLHLKTKGPENIICSCISPCGGWIAC 408
Query: 421 STESCVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVLISADSTLLLAVSLNGPLYIID 480
ST S L+ L+ + D + R+ +P L ++ +L S DST L S G L +I
Sbjct: 409 STASRFFLYRLNYEHDNISLQRVSKMPVFLRSAL--QILFSEDSTKLFVASNQGSLRVIR 466
Query: 481 LSSLEIKY--CVDPYKSNLMSDVISLVQMSECKQYIVCADRKS--HVVIWKNGQHHASLP 536
L + P + S + L+ +S ++ + + HV K + H ++P
Sbjct: 467 LQEGGFTHPRAFQPQSGTVQS--MCLLAVSPDGNWLAASGSSAGVHVYNVKQLKLHCTVP 524
Query: 537 RYRKPSTAMAIHPTLSTLVTVYSDHRIVEFDLNRKAFTTFSRKLETNHPNE-WLSRQLPV 595
Y P TA+AI P + LV +SD ++ E+ + K +T +SR ++ + WL R P+
Sbjct: 525 AYNFPVTALAIAPNTNNLVIAHSDQQVFEYSIPDKQYTEWSRTVQKQGFHHLWLQRDTPI 584
Query: 596 LGIEFDPQDSSLIYLMDDSALCVINKNKSLAHADAKIPRLGPKVVSGDSSNSTHVIESKV 655
I F P+ I L D C+I+K SL + K P +N + VI +
Sbjct: 585 THISFHPKRPMHILLHDTYMFCLIDK--SLPLPNDKTLLYNPL----PPTNESDVIRRRT 638
Query: 656 A--FHFVRRNKHLVYFGSLNDKEMLSVQVNPLS-FMEKLPP 693
A F ++ K L++ L++K +++V+ PL + +LPP
Sbjct: 639 AHAFKISKKYKPLLFVDLLDEKTLVAVE-RPLDDIVAQLPP 678
|
|
| SGD|S000002732 UTP4 "Subunit of U3-containing 90S preribosome and SSU processome" [Saccharomyces cerevisiae (taxid:4932)] | Back alignment and assigned GO terms |
|---|
Score = 421 (153.3 bits), Expect = 3.0e-38, Sum P(2) = 3.0e-38
Identities = 160/617 (25%), Positives = 273/617 (44%)
Query: 36 PKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWFND-----RLFSGGLQ 90
P RLA+ R++ +IEIW+ + V G SIE L W N RLFS G
Sbjct: 62 PSDLRLAIGRSNGNIEIWNPRNNWFQEMVIEGGK-DRSIEGLCWSNVNGESLRLFSIGGS 120
Query: 91 GFVNEYDMRR-LNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISD-EGLL-Y 147
V E+D+ L +++ SG W +S++ + L+ G + G + L IS G+L +
Sbjct: 121 TVVTEWDLATGLPLRNYDC-NSGVIWSISINDSQDKLSVGCDNGTVVLIDISGGPGVLEH 179
Query: 148 EKLLDRQQGRILCTAWHSSGDYLVTGCA-AAVRVWDIHK-----GHAIHKMSLDKSSKFS 201
+ +L RQ+ R+L AW D+++ GC+ +R+W K G +H M +DK+ K
Sbjct: 180 DTILMRQEARVLTLAWKKD-DFVIGGCSDGRIRIWSAQKNDENMGRLLHTMKVDKAKK-- 236
Query: 202 KNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLY 260
++T VW V + I +GDS G ++FWD + K H D+L LT D NY++
Sbjct: 237 ESTLVWSVIYLPRTDQIASGDSTGSIKFWDFQFATLNQSFKAHDADVLCLTTDTDNNYVF 296
Query: 261 CAGVDPTVVCF-QRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALHGNRXXXXX 319
AGVD + F Q T K Q ++ WV S NR++H D++++ + ++
Sbjct: 297 SAGVDRKIFQFSQNTNK---------SQKNNRWVNSSNRLLHGNDIRAICAYQSKGADFL 347
Query: 320 XXXXX-------XXXXXPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSLGSA 372
K P S V + K+ + V+ S +++W++G
Sbjct: 348 VSGGVEKTLVINSLTSFSNGNYRKMPTVEPYSKNVLVNKEQRLVVSWSESTVKIWTMG-- 405
Query: 373 QSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYSTESCVRLHSLD 432
TD S+ N +L+ K++ ++ I +S DG+ + S ++ L
Sbjct: 406 --TDSSTEQNY---------KLVCKLTLKDDQNISTCSLSPDGQVLVVGRPSTTKVFHLQ 454
Query: 433 LDGDKPQISRIKN-----LPAPLFKSIFTH--VLISADSTLLLAVSLNGPLYIIDLSSLE 485
G+K +++++ N L K I V+ S + + + V L D E
Sbjct: 455 PVGNKLKVTKLDNDLLLRTSTKLVKFIDNSKIVICSCEDDVFI-VDLESEE---DEKPQE 510
Query: 486 IKYC-VDPYKSNLMSDVISLVQMSECKQYIVCADRKSHVVIWKNGQHHASLPRYRKPSTA 544
++ V KS++ I+ + E Q I R VV + + S P R +
Sbjct: 511 VELLEVTSTKSSIKVPYINRINHLEVDQNIAVISRGCGVVDILDLKARISKPLARLNNFI 570
Query: 545 MAIHPTLS--TLVTVYSDHRIVEFDLN----------RKAFTTFSRKLETNHPNEWLSRQ 592
A+H S ++V + +D++I EF++N T +S+ N P EW + +
Sbjct: 571 TAVHINTSRKSVVVITADNKIYEFNMNLNSEAENEDSESVLTQWSKNNTDNLPKEWKTLK 630
Query: 593 LPVLGIEFDPQDSSLIY 609
+GI D ++SS ++
Sbjct: 631 ENCVGIFSDIENSSRLW 647
|
|
| POMBASE|SPBC19F5.02c utp4 "U3 snoRNP protein Utp4 (predicted)" [Schizosaccharomyces pombe (taxid:4896)] | Back alignment and assigned GO terms |
|---|
Score = 300 (110.7 bits), Expect = 4.9e-34, Sum P(2) = 4.9e-34
Identities = 90/313 (28%), Positives = 147/313 (46%)
Query: 16 VHNIKFYAPEPKVINCIACEPKSSR---------LAVSRADQSIEIWDISETPHVDRVFI 66
+H +F P I +A KS + LAV RA +IEIW+ + V
Sbjct: 3 IHRCRFIDYTPSAITAMAFSHKSGQNDSMPNNLLLAVGRASGNIEIWNPRNDWCLKTVLY 62
Query: 67 GDPLSNSIECLTWFND----RLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKK 122
G + SIE + W RLFS G + E+++ + +G W +++ +
Sbjct: 63 GG-VDRSIEGIVWSTGEEELRLFSIGFSTTITEWNLHTGKPLVNQDSNAGAIWSIAICDE 121
Query: 123 KRLLAAGTEQGHINLFQISD-EGLL-YEKLLDRQQGRILCTAWHSSGDYLVTGCA-AAVR 179
+ LA G + G LF IS G++ ++++L RQ RIL + + D+LV GCA ++
Sbjct: 122 TKTLAVGCDDGSCVLFDISGGPGVIEFKRVLMRQTSRILSLDFQTK-DHLVGGCADGVIK 180
Query: 180 VWDIHKGHA--IHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQW 237
VWD+ ++ I +M +D++ K + +W V D TI++ DS G V+FW+GK
Sbjct: 181 VWDLSTPNSAIISRMQVDRARK-GEAALIWAVKSLRDGTIVSADSSGAVKFWNGKFFTLS 239
Query: 238 SDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVN 297
K H D L L VS + + ++ +G+D + + R E G WV +
Sbjct: 240 QSFKLHLADALCLGVSANGDMVFSSGIDRKTIQYSR------------EGGKREWVSNSF 287
Query: 298 RVIHEGDVKSLAL 310
R H DV+ +A+
Sbjct: 288 RRFHSHDVRCMAV 300
|
|
| UNIPROTKB|I3LIQ3 CIRH1A "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 351 (128.6 bits), Expect = 3.1e-31, P = 3.1e-31
Identities = 108/356 (30%), Positives = 174/356 (48%)
Query: 347 VSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATI 406
V AK Q +L Q+ HLELW LGS +T H +T +PL ++ + I
Sbjct: 24 VFCAKKKQLLLFQFAHHLELWRLGSTVAT--GKHGDT--LPLSKNADHLLHLKTKGPENI 79
Query: 407 RCSVVSNDGKYVAYSTESCVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVLISADSTL 466
CS +S G +VAYST S L+ L+ D D + R+ +PA L ++ H+L S DS+
Sbjct: 80 ICSCISPCGSWVAYSTASRFFLYRLNYDHDSVSLQRVSKMPAFLRSAL--HILFSEDSSK 137
Query: 467 LLAVSLNGPLYIIDL--SSLEIKYCVDPYKSNLMSDVISLVQMSECKQYIVCADRKSHVV 524
L S G L+II L S + + P + S + L+ +S ++ + + V
Sbjct: 138 LFVASSQGSLHIIRLLEGSFKHLHTFQPQSGTVES--MCLLAVSPDGNWLAASGTSAGVH 195
Query: 525 IWKNGQH---HASLPRYRKPSTAMAIHPTLSTLVTVYSDHRIVEFDLNRKAFTTFSRKLE 581
++ N +H H ++P Y P TA+AI P + LV +SD ++ E+ + K +T +SR ++
Sbjct: 196 VY-NVKHLKLHCTVPAYNFPVTALAIAPKTNNLVIAHSDQQVFEYSIPDKQYTEWSRTIQ 254
Query: 582 TNHPNE-WLSRQLPVLGIEFDPQDSSLIYLMDDSALCVINKNKSLAHADAKIPRLGPKVV 640
+ WL R P+ I F P+ I L D C+I+K SL + K P
Sbjct: 255 KQGFHHLWLQRDTPITHISFHPKRPMHILLHDAYMFCIIDK--SLPLPNDKTLLYNPL-- 310
Query: 641 SGDSSNSTHVIESKVA--FHFVRRNKHLVYFGSLNDKEMLSVQVNPLS-FMEKLPP 693
+N + VI + A F + K L++ L++K +++V+ PL + +LPP
Sbjct: 311 --PPTNESDVIRRRTAHAFKISKIYKPLLFMDLLDEKTLVAVE-RPLDDIIAQLPP 363
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q8R2N2 | CIR1A_MOUSE | No assigned EC number | 0.3057 | 0.9322 | 0.9620 | yes | N/A |
| O60161 | UTP4_SCHPO | No assigned EC number | 0.2356 | 0.8954 | 0.8929 | yes | N/A |
| Q06679 | UTP4_YEAST | No assigned EC number | 0.2572 | 0.9124 | 0.8324 | yes | N/A |
| Q969X6 | CIR1A_HUMAN | No assigned EC number | 0.3128 | 0.9322 | 0.9620 | yes | N/A |
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 708 | |||
| cd00200 | 289 | cd00200, WD40, WD40 domain, found in a number of e | 8e-22 | |
| cd00200 | 289 | cd00200, WD40, WD40 domain, found in a number of e | 5e-19 | |
| COG2319 | 466 | COG2319, COG2319, FOG: WD40 repeat [General functi | 6e-15 | |
| cd00200 | 289 | cd00200, WD40, WD40 domain, found in a number of e | 1e-12 | |
| COG2319 | 466 | COG2319, COG2319, FOG: WD40 repeat [General functi | 9e-08 | |
| cd00200 | 289 | cd00200, WD40, WD40 domain, found in a number of e | 1e-05 | |
| cd00200 | 289 | cd00200, WD40, WD40 domain, found in a number of e | 1e-05 |
| >gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment | Back alignment and domain information |
|---|
Score = 95.9 bits (239), Expect = 8e-22
Identities = 59/302 (19%), Positives = 109/302 (36%), Gaps = 34/302 (11%)
Query: 26 PKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWFND--R 83
+ C+A P LA D +I++WD+ ET + R G + + + D
Sbjct: 9 TGGVTCVAFSPDGKLLATGSGDGTIKVWDL-ETGELLRTLKG--HTGPVRDVAASADGTY 65
Query: 84 LFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDE 143
L SG + +D+ + + ++ R+L++ + I ++ +
Sbjct: 66 LASGSSDKTIRLWDLETGECVRTLTGHTSYVSSVAFSPDGRILSSSSRDKTIKVWDVETG 125
Query: 144 GLLYEKLLDRQQGRILCTAWHSSGDYLVTGCA-AAVRVWDIHKGHAIHKMSLDKSSKFSK 202
L L + A+ G ++ + +++WD+ G + ++
Sbjct: 126 KCLTT--LRGHTDWVNSVAFSPDGTFVASSSQDGTIKLWDLRTGKCVATLTGHTGE---- 179
Query: 203 NTAVWCVAFCAD-FTIITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYC 261
V VAF D +++ S G ++ WD TG ++ H+ + ++ S D L
Sbjct: 180 ---VNSVAFSPDGEKLLSSSSDGTIKLWDLSTGKCLGTLRGHENGVNSVAFSPDGYLLAS 236
Query: 262 AGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSGG 319
D T+ + V + SG H V SLA G RL SG
Sbjct: 237 GSEDGTIRVWDLRTGECVQTLSG----------------HTNSVTSLAWSPDGKRLASGS 280
Query: 320 LD 321
D
Sbjct: 281 AD 282
|
Length = 289 |
| >gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment | Back alignment and domain information |
|---|
Score = 87.8 bits (218), Expect = 5e-19
Identities = 46/244 (18%), Positives = 94/244 (38%), Gaps = 16/244 (6%)
Query: 29 INCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWFNDR--LFS 86
+ +A + LA +D++I +WD+ ET R G ++ + + + D L S
Sbjct: 54 VRDVAASADGTYLASGSSDKTIRLWDL-ETGECVRTLTGH--TSYVSSVAFSPDGRILSS 110
Query: 87 GGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLL 146
+ +D+ ++ + ++ +A+ ++ G I L+ + +
Sbjct: 111 SSRDKTIKVWDVETGKCLTTLRGHTDWVNSVAFSPDGTFVASSSQDGTIKLWDLRTGKCV 170
Query: 147 YEKLLDRQQGRILCTAWHSSGDYLVTGCA-AAVRVWDIHKGHAIHKMSLDKSSKFSKNTA 205
L G + A+ G+ L++ + +++WD+ G + +
Sbjct: 171 --ATLTGHTGEVNSVAFSPDGEKLLSSSSDGTIKLWDLSTGKCLGTLR-------GHENG 221
Query: 206 VWCVAFCADFTIIT-GDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGV 264
V VAF D ++ G G +R WD +TG + H + +L S D L
Sbjct: 222 VNSVAFSPDGYLLASGSEDGTIRVWDLRTGECVQTLSGHTNSVTSLAWSPDGKRLASGSA 281
Query: 265 DPTV 268
D T+
Sbjct: 282 DGTI 285
|
Length = 289 |
| >gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Score = 77.4 bits (189), Expect = 6e-15
Identities = 77/431 (17%), Positives = 142/431 (32%), Gaps = 50/431 (11%)
Query: 4 MCKKRNTMGTYGVHNIKFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDR 63
+ +++ + + I IA P L +D +I++WD+ + +
Sbjct: 43 LALLSDSLVSLPDLSSLLLRGHEDSITSIAFSPDGELLLSGSSDGTIKLWDLDNGEKLIK 102
Query: 64 VFIGDPLSNSIECLTWFNDR----LFSGGLQGFVNEYDMRRLNIKSSTAVT-SGTCWCLS 118
G S+ + D L S L G V +D+ T S + L+
Sbjct: 103 SLEGLHDSSVSKLALSSPDGNSILLASSSLDGTVKLWDLSTPGKLIRTLEGHSESVTSLA 162
Query: 119 VHKKKRLLAAGTEQ-GHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA- 176
+LLA+G+ G I L+ + L L + A+ G L+ ++
Sbjct: 163 FSPDGKLLASGSSLDGTIKLWDLRTGKPL--STLAGHTDPVSSLAFSPDGGLLIASGSSD 220
Query: 177 -AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADF-TIITGDSGGFVRFWDGKTG 234
+R+WD+ G + S S ++ +F D + +G S G +R WD ++
Sbjct: 221 GTIRLWDLSTGKLLR-------STLSGHSDSVVSSFSPDGSLLASGSSDGTIRLWDLRSS 273
Query: 235 VQWSDVKT-HKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWV 293
+ H +L++ S D L D TV + + S +
Sbjct: 274 SSLLRTLSGHSSSVLSVAFSPDGKLLASGSSDGTVRLWDLETGKLLSSLT---------- 323
Query: 294 RSVNRVIHEGDVKSLALHGNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDI 353
HEG V SL+ + S L T+ + +
Sbjct: 324 ----LKGHEGPVSSLSFSPD-------GSLLVSGGSDDGTIRLWDLRTGKPL-------- 364
Query: 354 QHVLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSN 413
L +++ L + + S T + LS L+ + + + S
Sbjct: 365 -KTLEGHSNVLSVSFSPDGRVVSSGSTDGTVRLWDLSTGSLLRNLDGHTS-RVTSLDFSP 422
Query: 414 DGKYVAYSTES 424
DGK +A +
Sbjct: 423 DGKSLASGSSD 433
|
Length = 466 |
| >gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment | Back alignment and domain information |
|---|
Score = 68.9 bits (169), Expect = 1e-12
Identities = 38/175 (21%), Positives = 62/175 (35%), Gaps = 27/175 (15%)
Query: 156 GRILCTAWHSSGDYLVTGCA-AAVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCAD 214
G + C A+ G L TG ++VWD+ G + + V VA AD
Sbjct: 10 GGVTCVAFSPDGKLLATGSGDGTIKVWDLETGELLRTLKGHTGP-------VRDVAASAD 62
Query: 215 FT-IITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQR 273
T + +G S +R WD +TG + H + ++ S D L + D T+ +
Sbjct: 63 GTYLASGSSDKTIRLWDLETGECVRTLTGHTSYVSSVAFSPDGRILSSSSRDKTIKVWDV 122
Query: 274 TRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALHGNR--LYSGGLDSYLSL 326
+ + G H V S+A + + S D + L
Sbjct: 123 ETGKCLTTLRG----------------HTDWVNSVAFSPDGTFVASSSQDGTIKL 161
|
Length = 289 |
| >gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Score = 54.7 bits (130), Expect = 9e-08
Identities = 48/218 (22%), Positives = 85/218 (38%), Gaps = 19/218 (8%)
Query: 30 NCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWFND--RLFSG 87
+ P S LA +D +I +WD+ + + R G S+S+ + + D L SG
Sbjct: 245 VVSSFSPDGSLLASGSSDGTIRLWDLRSSSSLLRTLSGH--SSSVLSVAFSPDGKLLASG 302
Query: 88 GLQGFVNEYDMRRLNIKSSTAVTS--GTCWCLSVHKK-KRLLAAGTEQGHINLFQISDEG 144
G V +D+ + SS + G LS L++ G++ G I L+ +
Sbjct: 303 SSDGTVRLWDLETGKLLSSLTLKGHEGPVSSLSFSPDGSLLVSGGSDDGTIRLWDLRTG- 361
Query: 145 LLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKN 203
+L ++ G + +G VR+WD+ G + + S
Sbjct: 362 --KPLKTLEGHSNVLSVSFSPDGRVVSSGSTDGTVRLWDLSTGSLLRNLDGHTSR----- 414
Query: 204 TAVWCVAFCAD-FTIITGDSGGFVRFWDGKTGVQWSDV 240
V + F D ++ +G S +R WD KT ++
Sbjct: 415 --VTSLDFSPDGKSLASGSSDNTIRLWDLKTSLKSVSF 450
|
Length = 466 |
| >gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment | Back alignment and domain information |
|---|
Score = 47.7 bits (114), Expect = 1e-05
Identities = 63/329 (19%), Positives = 108/329 (32%), Gaps = 53/329 (16%)
Query: 240 VKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRV 299
+K H + + S D L D T+ +V E ++
Sbjct: 5 LKGHTGGVTCVAFSPDGKLLATGSGDGTI---------KVWDLETGELLRTLKG------ 49
Query: 300 IHEGDVKSLAL--HGNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVL 357
H G V+ +A G L SG D + L + +T TL T + V
Sbjct: 50 -HTGPVRDVAASADGTYLASGSSDKTIRL--WDLETGEC-VRTLTGHT-----SYVSSV- 99
Query: 358 LQYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKY 417
++ + S S T + TG L + + + S DG +
Sbjct: 100 -AFSPDGRILSSSSRDKT-IKVWDVETGKCLTTLR--------GHTDWVNSVAFSPDGTF 149
Query: 418 VAY-STESCVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVLISADSTLLLAVSLNGPL 476
VA S + ++L L + L V S D LL+ S +G +
Sbjct: 150 VASSSQDGTIKLWDLR------TGKCVATLTG--HTGEVNSVAFSPDGEKLLSSSSDGTI 201
Query: 477 YIIDLSSLEIKYCVDPYKSNLMSDVISLVQMSECKQYIVCADRKSHVVIW--KNGQHHAS 534
+ DLS+ + C+ + + V S V S + + +W + G+ +
Sbjct: 202 KLWDLSTGK---CLGTLRGHENG-VNS-VAFSPDGYLLASGSEDGTIRVWDLRTGECVQT 256
Query: 535 LPRYRKPSTAMAIHPTLSTLVTVYSDHRI 563
L + T++A P L + +D I
Sbjct: 257 LSGHTNSVTSLAWSPDGKRLASGSADGTI 285
|
Length = 289 |
| >gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment | Back alignment and domain information |
|---|
Score = 47.3 bits (113), Expect = 1e-05
Identities = 25/113 (22%), Positives = 50/113 (44%), Gaps = 5/113 (4%)
Query: 29 INCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWFNDR--LFS 86
+N +A P +L S +D +I++WD+S + G N + + + D L S
Sbjct: 180 VNSVAFSPDGEKLLSSSSDGTIKLWDLSTGKCL-GTLRGH--ENGVNSVAFSPDGYLLAS 236
Query: 87 GGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQ 139
G G + +D+R + + + + L+ + LA+G+ G I ++
Sbjct: 237 GSEDGTIRVWDLRTGECVQTLSGHTNSVTSLAWSPDGKRLASGSADGTIRIWD 289
|
Length = 289 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 708 | |||
| KOG2048|consensus | 691 | 100.0 | ||
| KOG0319|consensus | 775 | 100.0 | ||
| KOG0318|consensus | 603 | 100.0 | ||
| KOG0319|consensus | 775 | 100.0 | ||
| KOG0318|consensus | 603 | 100.0 | ||
| KOG0306|consensus | 888 | 100.0 | ||
| KOG0291|consensus | 893 | 100.0 | ||
| KOG0291|consensus | 893 | 100.0 | ||
| KOG0271|consensus | 480 | 100.0 | ||
| KOG0271|consensus | 480 | 100.0 | ||
| KOG0306|consensus | 888 | 100.0 | ||
| KOG1408|consensus | 1080 | 100.0 | ||
| KOG0272|consensus | 459 | 100.0 | ||
| KOG1539|consensus | 910 | 100.0 | ||
| KOG2106|consensus | 626 | 100.0 | ||
| KOG0272|consensus | 459 | 100.0 | ||
| KOG1063|consensus | 764 | 100.0 | ||
| KOG0276|consensus | 794 | 100.0 | ||
| KOG0286|consensus | 343 | 100.0 | ||
| KOG1408|consensus | 1080 | 100.0 | ||
| KOG0292|consensus | 1202 | 100.0 | ||
| KOG0279|consensus | 315 | 100.0 | ||
| KOG0286|consensus | 343 | 100.0 | ||
| KOG0279|consensus | 315 | 100.0 | ||
| KOG0315|consensus | 311 | 100.0 | ||
| KOG0296|consensus | 399 | 100.0 | ||
| KOG0285|consensus | 460 | 100.0 | ||
| KOG0276|consensus | 794 | 100.0 | ||
| KOG1539|consensus | 910 | 100.0 | ||
| KOG1063|consensus | 764 | 100.0 | ||
| KOG2106|consensus | 626 | 100.0 | ||
| KOG0295|consensus | 406 | 100.0 | ||
| KOG0315|consensus | 311 | 100.0 | ||
| KOG0263|consensus | 707 | 100.0 | ||
| KOG0645|consensus | 312 | 100.0 | ||
| KOG0273|consensus | 524 | 100.0 | ||
| KOG0273|consensus | 524 | 100.0 | ||
| KOG0285|consensus | 460 | 100.0 | ||
| KOG0292|consensus | 1202 | 100.0 | ||
| KOG0296|consensus | 399 | 100.0 | ||
| KOG0281|consensus | 499 | 100.0 | ||
| KOG2048|consensus | 691 | 100.0 | ||
| KOG0284|consensus | 464 | 100.0 | ||
| KOG0645|consensus | 312 | 100.0 | ||
| KOG0265|consensus | 338 | 100.0 | ||
| KOG0266|consensus | 456 | 100.0 | ||
| KOG0295|consensus | 406 | 100.0 | ||
| KOG0293|consensus | 519 | 100.0 | ||
| cd00200 | 289 | WD40 WD40 domain, found in a number of eukaryotic | 100.0 | |
| KOG0316|consensus | 307 | 100.0 | ||
| KOG0284|consensus | 464 | 100.0 | ||
| KOG0282|consensus | 503 | 100.0 | ||
| KOG0265|consensus | 338 | 100.0 | ||
| KOG0275|consensus | 508 | 100.0 | ||
| KOG0263|consensus | 707 | 100.0 | ||
| KOG0281|consensus | 499 | 100.0 | ||
| KOG0278|consensus | 334 | 100.0 | ||
| KOG0313|consensus | 423 | 100.0 | ||
| KOG0316|consensus | 307 | 100.0 | ||
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 100.0 | |
| KOG0282|consensus | 503 | 100.0 | ||
| KOG0266|consensus | 456 | 100.0 | ||
| cd00200 | 289 | WD40 WD40 domain, found in a number of eukaryotic | 100.0 | |
| KOG0293|consensus | 519 | 100.0 | ||
| KOG0643|consensus | 327 | 99.98 | ||
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 99.98 | |
| KOG0643|consensus | 327 | 99.98 | ||
| KOG0294|consensus | 362 | 99.98 | ||
| KOG1446|consensus | 311 | 99.98 | ||
| KOG0274|consensus | 537 | 99.98 | ||
| KOG0283|consensus | 712 | 99.97 | ||
| KOG1407|consensus | 313 | 99.97 | ||
| KOG1407|consensus | 313 | 99.97 | ||
| KOG0301|consensus | 745 | 99.97 | ||
| KOG0308|consensus | 735 | 99.97 | ||
| KOG0278|consensus | 334 | 99.97 | ||
| KOG1445|consensus | 1012 | 99.97 | ||
| KOG0313|consensus | 423 | 99.97 | ||
| KOG0305|consensus | 484 | 99.97 | ||
| KOG0274|consensus | 537 | 99.97 | ||
| KOG0300|consensus | 481 | 99.97 | ||
| KOG0288|consensus | 459 | 99.97 | ||
| KOG0275|consensus | 508 | 99.97 | ||
| KOG0277|consensus | 311 | 99.97 | ||
| KOG0640|consensus | 430 | 99.97 | ||
| KOG0268|consensus | 433 | 99.97 | ||
| KOG0647|consensus | 347 | 99.97 | ||
| KOG0289|consensus | 506 | 99.97 | ||
| KOG0641|consensus | 350 | 99.97 | ||
| KOG2096|consensus | 420 | 99.96 | ||
| KOG0299|consensus | 479 | 99.96 | ||
| KOG0308|consensus | 735 | 99.96 | ||
| KOG1446|consensus | 311 | 99.96 | ||
| PTZ00421 | 493 | coronin; Provisional | 99.96 | |
| KOG0305|consensus | 484 | 99.96 | ||
| KOG0310|consensus | 487 | 99.96 | ||
| PTZ00421 | 493 | coronin; Provisional | 99.96 | |
| KOG0973|consensus | 942 | 99.96 | ||
| KOG0310|consensus | 487 | 99.96 | ||
| KOG0294|consensus | 362 | 99.96 | ||
| KOG0973|consensus | 942 | 99.96 | ||
| KOG0277|consensus | 311 | 99.96 | ||
| KOG0640|consensus | 430 | 99.96 | ||
| KOG1332|consensus | 299 | 99.96 | ||
| KOG0772|consensus | 641 | 99.96 | ||
| KOG0299|consensus | 479 | 99.96 | ||
| KOG0268|consensus | 433 | 99.96 | ||
| KOG1036|consensus | 323 | 99.96 | ||
| KOG0772|consensus | 641 | 99.95 | ||
| KOG0300|consensus | 481 | 99.95 | ||
| PTZ00420 | 568 | coronin; Provisional | 99.95 | |
| KOG0288|consensus | 459 | 99.95 | ||
| KOG2096|consensus | 420 | 99.95 | ||
| KOG0301|consensus | 745 | 99.95 | ||
| KOG0289|consensus | 506 | 99.95 | ||
| KOG0283|consensus | 712 | 99.95 | ||
| KOG1963|consensus | 792 | 99.95 | ||
| PTZ00420 | 568 | coronin; Provisional | 99.95 | |
| KOG0647|consensus | 347 | 99.95 | ||
| KOG1538|consensus | 1081 | 99.95 | ||
| KOG0650|consensus | 733 | 99.94 | ||
| KOG0641|consensus | 350 | 99.94 | ||
| KOG1963|consensus | 792 | 99.94 | ||
| KOG2055|consensus | 514 | 99.94 | ||
| KOG1274|consensus | 933 | 99.94 | ||
| KOG0639|consensus | 705 | 99.94 | ||
| KOG2055|consensus | 514 | 99.93 | ||
| KOG0264|consensus | 422 | 99.93 | ||
| KOG0646|consensus | 476 | 99.93 | ||
| KOG1332|consensus | 299 | 99.93 | ||
| KOG0639|consensus | 705 | 99.93 | ||
| KOG1036|consensus | 323 | 99.93 | ||
| KOG0267|consensus | 825 | 99.93 | ||
| TIGR03866 | 300 | PQQ_ABC_repeats PQQ-dependent catabolism-associate | 99.93 | |
| KOG4283|consensus | 397 | 99.92 | ||
| KOG0269|consensus | 839 | 99.92 | ||
| KOG4283|consensus | 397 | 99.92 | ||
| KOG1273|consensus | 405 | 99.92 | ||
| KOG0646|consensus | 476 | 99.92 | ||
| TIGR03866 | 300 | PQQ_ABC_repeats PQQ-dependent catabolism-associate | 99.92 | |
| KOG2445|consensus | 361 | 99.92 | ||
| KOG0264|consensus | 422 | 99.91 | ||
| KOG1273|consensus | 405 | 99.91 | ||
| KOG2445|consensus | 361 | 99.91 | ||
| KOG0269|consensus | 839 | 99.91 | ||
| KOG4328|consensus | 498 | 99.91 | ||
| KOG1274|consensus | 933 | 99.9 | ||
| KOG1538|consensus | 1081 | 99.9 | ||
| KOG1445|consensus | 1012 | 99.9 | ||
| KOG0267|consensus | 825 | 99.89 | ||
| KOG1034|consensus | 385 | 99.89 | ||
| KOG0321|consensus | 720 | 99.89 | ||
| COG2319 | 466 | FOG: WD40 repeat [General function prediction only | 99.88 | |
| KOG0650|consensus | 733 | 99.88 | ||
| KOG2919|consensus | 406 | 99.88 | ||
| KOG2919|consensus | 406 | 99.88 | ||
| KOG0270|consensus | 463 | 99.88 | ||
| KOG1009|consensus | 434 | 99.88 | ||
| KOG1034|consensus | 385 | 99.87 | ||
| KOG0321|consensus | 720 | 99.87 | ||
| KOG4378|consensus | 673 | 99.86 | ||
| KOG4378|consensus | 673 | 99.86 | ||
| KOG0270|consensus | 463 | 99.86 | ||
| KOG0307|consensus | 1049 | 99.86 | ||
| KOG0322|consensus | 323 | 99.86 | ||
| KOG1524|consensus | 737 | 99.85 | ||
| KOG0302|consensus | 440 | 99.85 | ||
| KOG4328|consensus | 498 | 99.85 | ||
| COG2319 | 466 | FOG: WD40 repeat [General function prediction only | 99.85 | |
| KOG1188|consensus | 376 | 99.85 | ||
| KOG0302|consensus | 440 | 99.84 | ||
| KOG4497|consensus | 447 | 99.84 | ||
| KOG0307|consensus | 1049 | 99.84 | ||
| KOG0649|consensus | 325 | 99.84 | ||
| KOG0303|consensus | 472 | 99.83 | ||
| KOG1009|consensus | 434 | 99.83 | ||
| KOG4497|consensus | 447 | 99.83 | ||
| KOG4227|consensus | 609 | 99.82 | ||
| KOG0642|consensus | 577 | 99.82 | ||
| KOG2041|consensus | 1189 | 99.81 | ||
| KOG0303|consensus | 472 | 99.81 | ||
| KOG1007|consensus | 370 | 99.8 | ||
| KOG0322|consensus | 323 | 99.8 | ||
| KOG1007|consensus | 370 | 99.8 | ||
| KOG0644|consensus | 1113 | 99.79 | ||
| KOG1524|consensus | 737 | 99.79 | ||
| KOG1912|consensus | 1062 | 99.79 | ||
| KOG0649|consensus | 325 | 99.79 | ||
| PRK11028 | 330 | 6-phosphogluconolactonase; Provisional | 99.79 | |
| KOG1912|consensus | 1062 | 99.78 | ||
| KOG2110|consensus | 391 | 99.77 | ||
| PRK11028 | 330 | 6-phosphogluconolactonase; Provisional | 99.77 | |
| KOG1587|consensus | 555 | 99.76 | ||
| KOG0290|consensus | 364 | 99.76 | ||
| KOG1523|consensus | 361 | 99.76 | ||
| KOG1188|consensus | 376 | 99.75 | ||
| KOG0644|consensus | 1113 | 99.75 | ||
| KOG1310|consensus | 758 | 99.75 | ||
| KOG1523|consensus | 361 | 99.75 | ||
| KOG4227|consensus | 609 | 99.75 | ||
| KOG0642|consensus | 577 | 99.74 | ||
| KOG2110|consensus | 391 | 99.74 | ||
| KOG1517|consensus | 1387 | 99.74 | ||
| KOG1240|consensus | 1431 | 99.73 | ||
| KOG0771|consensus | 398 | 99.73 | ||
| KOG1310|consensus | 758 | 99.73 | ||
| KOG1334|consensus | 559 | 99.73 | ||
| KOG1517|consensus | 1387 | 99.72 | ||
| PF04762 | 928 | IKI3: IKI3 family; InterPro: IPR006849 Members of | 99.72 | |
| KOG0290|consensus | 364 | 99.72 | ||
| PRK01742 | 429 | tolB translocation protein TolB; Provisional | 99.71 | |
| KOG1334|consensus | 559 | 99.71 | ||
| KOG2041|consensus | 1189 | 99.69 | ||
| COG4946 | 668 | Uncharacterized protein related to the periplasmic | 99.69 | |
| KOG2139|consensus | 445 | 99.68 | ||
| KOG0974|consensus | 967 | 99.68 | ||
| KOG2139|consensus | 445 | 99.68 | ||
| PRK01742 | 429 | tolB translocation protein TolB; Provisional | 99.68 | |
| PF02239 | 369 | Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO | 99.68 | |
| KOG1240|consensus | 1431 | 99.67 | ||
| KOG1587|consensus | 555 | 99.66 | ||
| KOG0771|consensus | 398 | 99.66 | ||
| KOG2111|consensus | 346 | 99.66 | ||
| KOG1272|consensus | 545 | 99.65 | ||
| PRK03629 | 429 | tolB translocation protein TolB; Provisional | 99.65 | |
| PF02239 | 369 | Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO | 99.64 | |
| KOG2394|consensus | 636 | 99.64 | ||
| KOG2315|consensus | 566 | 99.63 | ||
| KOG1272|consensus | 545 | 99.62 | ||
| KOG2321|consensus | 703 | 99.62 | ||
| KOG3881|consensus | 412 | 99.61 | ||
| PF10282 | 345 | Lactonase: Lactonase, 7-bladed beta-propeller; Int | 99.61 | |
| COG4946 | 668 | Uncharacterized protein related to the periplasmic | 99.6 | |
| KOG2394|consensus | 636 | 99.6 | ||
| PRK04922 | 433 | tolB translocation protein TolB; Provisional | 99.6 | |
| PF10282 | 345 | Lactonase: Lactonase, 7-bladed beta-propeller; Int | 99.59 | |
| PRK03629 | 429 | tolB translocation protein TolB; Provisional | 99.59 | |
| KOG2315|consensus | 566 | 99.58 | ||
| PRK05137 | 435 | tolB translocation protein TolB; Provisional | 99.58 | |
| PRK02889 | 427 | tolB translocation protein TolB; Provisional | 99.57 | |
| KOG2111|consensus | 346 | 99.57 | ||
| KOG0974|consensus | 967 | 99.57 | ||
| KOG2314|consensus | 698 | 99.56 | ||
| PRK02889 | 427 | tolB translocation protein TolB; Provisional | 99.56 | |
| KOG1354|consensus | 433 | 99.56 | ||
| PRK04922 | 433 | tolB translocation protein TolB; Provisional | 99.56 | |
| COG5354 | 561 | Uncharacterized protein, contains Trp-Asp (WD) rep | 99.56 | |
| COG2706 | 346 | 3-carboxymuconate cyclase [Carbohydrate transport | 99.56 | |
| COG5354 | 561 | Uncharacterized protein, contains Trp-Asp (WD) rep | 99.55 | |
| PF04762 | 928 | IKI3: IKI3 family; InterPro: IPR006849 Members of | 99.55 | |
| PRK05137 | 435 | tolB translocation protein TolB; Provisional | 99.55 | |
| KOG1409|consensus | 404 | 99.54 | ||
| COG2706 | 346 | 3-carboxymuconate cyclase [Carbohydrate transport | 99.5 | |
| PF08662 | 194 | eIF2A: Eukaryotic translation initiation factor eI | 99.5 | |
| PF08662 | 194 | eIF2A: Eukaryotic translation initiation factor eI | 99.5 | |
| TIGR02658 | 352 | TTQ_MADH_Hv methylamine dehydrogenase heavy chain. | 99.49 | |
| KOG3881|consensus | 412 | 99.48 | ||
| KOG1354|consensus | 433 | 99.46 | ||
| KOG2314|consensus | 698 | 99.45 | ||
| KOG2321|consensus | 703 | 99.45 | ||
| TIGR03300 | 377 | assembly_YfgL outer membrane assembly lipoprotein | 99.43 | |
| KOG4547|consensus | 541 | 99.41 | ||
| PRK04792 | 448 | tolB translocation protein TolB; Provisional | 99.41 | |
| TIGR02800 | 417 | propeller_TolB tol-pal system beta propeller repea | 99.4 | |
| PRK00178 | 430 | tolB translocation protein TolB; Provisional | 99.4 | |
| TIGR02800 | 417 | propeller_TolB tol-pal system beta propeller repea | 99.4 | |
| TIGR03300 | 377 | assembly_YfgL outer membrane assembly lipoprotein | 99.38 | |
| PRK00178 | 430 | tolB translocation protein TolB; Provisional | 99.38 | |
| KOG4532|consensus | 344 | 99.38 | ||
| KOG1409|consensus | 404 | 99.37 | ||
| PRK04792 | 448 | tolB translocation protein TolB; Provisional | 99.36 | |
| KOG4547|consensus | 541 | 99.35 | ||
| PRK01029 | 428 | tolB translocation protein TolB; Provisional | 99.33 | |
| TIGR02658 | 352 | TTQ_MADH_Hv methylamine dehydrogenase heavy chain. | 99.33 | |
| PRK01029 | 428 | tolB translocation protein TolB; Provisional | 99.31 | |
| KOG1064|consensus | 2439 | 99.2 | ||
| PRK11138 | 394 | outer membrane biogenesis protein BamB; Provisiona | 99.17 | |
| PRK11138 | 394 | outer membrane biogenesis protein BamB; Provisiona | 99.14 | |
| KOG0280|consensus | 339 | 99.13 | ||
| KOG4190|consensus | 1034 | 99.11 | ||
| KOG4190|consensus | 1034 | 99.11 | ||
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 99.1 | |
| KOG0280|consensus | 339 | 99.09 | ||
| PF08450 | 246 | SGL: SMP-30/Gluconolaconase/LRE-like region; Inter | 99.09 | |
| KOG1064|consensus | 2439 | 99.08 | ||
| PF15492 | 282 | Nbas_N: Neuroblastoma-amplified sequence, N termin | 99.08 | |
| PRK04043 | 419 | tolB translocation protein TolB; Provisional | 99.06 | |
| COG5170 | 460 | CDC55 Serine/threonine protein phosphatase 2A, reg | 99.04 | |
| COG5170 | 460 | CDC55 Serine/threonine protein phosphatase 2A, reg | 99.01 | |
| KOG1920|consensus | 1265 | 99.01 | ||
| KOG0309|consensus | 1081 | 99.01 | ||
| PF13360 | 238 | PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A | 99.0 | |
| KOG4714|consensus | 319 | 99.0 | ||
| KOG3914|consensus | 390 | 98.99 | ||
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 98.99 | |
| KOG0309|consensus | 1081 | 98.99 | ||
| PRK04043 | 419 | tolB translocation protein TolB; Provisional | 98.99 | |
| KOG4649|consensus | 354 | 98.98 | ||
| KOG3914|consensus | 390 | 98.97 | ||
| KOG4649|consensus | 354 | 98.96 | ||
| KOG4532|consensus | 344 | 98.95 | ||
| KOG3617|consensus | 1416 | 98.94 | ||
| PF13360 | 238 | PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A | 98.93 | |
| PF08450 | 246 | SGL: SMP-30/Gluconolaconase/LRE-like region; Inter | 98.9 | |
| PF07433 | 305 | DUF1513: Protein of unknown function (DUF1513); In | 98.88 | |
| PF15492 | 282 | Nbas_N: Neuroblastoma-amplified sequence, N termin | 98.87 | |
| KOG2066|consensus | 846 | 98.82 | ||
| PF07433 | 305 | DUF1513: Protein of unknown function (DUF1513); In | 98.82 | |
| KOG3617|consensus | 1416 | 98.81 | ||
| KOG1832|consensus | 1516 | 98.79 | ||
| KOG1897|consensus | 1096 | 98.73 | ||
| KOG1645|consensus | 463 | 98.7 | ||
| KOG4714|consensus | 319 | 98.67 | ||
| PF00400 | 39 | WD40: WD domain, G-beta repeat; InterPro: IPR01978 | 98.65 | |
| KOG1832|consensus | 1516 | 98.63 | ||
| KOG2695|consensus | 425 | 98.63 | ||
| cd00216 | 488 | PQQ_DH Dehydrogenases with pyrrolo-quinoline quino | 98.63 | |
| PF00400 | 39 | WD40: WD domain, G-beta repeat; InterPro: IPR01978 | 98.63 | |
| KOG3621|consensus | 726 | 98.62 | ||
| KOG0882|consensus | 558 | 98.61 | ||
| PF00930 | 353 | DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-termin | 98.59 | |
| KOG1920|consensus | 1265 | 98.55 | ||
| PF06433 | 342 | Me-amine-dh_H: Methylamine dehydrogenase heavy cha | 98.55 | |
| PF00930 | 353 | DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-termin | 98.53 | |
| PF04053 | 443 | Coatomer_WDAD: Coatomer WD associated region ; Int | 98.52 | |
| KOG1275|consensus | 1118 | 98.51 | ||
| PRK02888 | 635 | nitrous-oxide reductase; Validated | 98.5 | |
| KOG2695|consensus | 425 | 98.49 | ||
| KOG1897|consensus | 1096 | 98.47 | ||
| cd00216 | 488 | PQQ_DH Dehydrogenases with pyrrolo-quinoline quino | 98.45 | |
| KOG1275|consensus | 1118 | 98.44 | ||
| PF08596 | 395 | Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; | 98.44 | |
| PF06977 | 248 | SdiA-regulated: SdiA-regulated; InterPro: IPR00972 | 98.42 | |
| KOG2114|consensus | 933 | 98.41 | ||
| PF06433 | 342 | Me-amine-dh_H: Methylamine dehydrogenase heavy cha | 98.4 | |
| KOG0882|consensus | 558 | 98.39 | ||
| PF11768 | 545 | DUF3312: Protein of unknown function (DUF3312); In | 98.39 | |
| PF06977 | 248 | SdiA-regulated: SdiA-regulated; InterPro: IPR00972 | 98.38 | |
| PF11768 | 545 | DUF3312: Protein of unknown function (DUF3312); In | 98.37 | |
| TIGR03075 | 527 | PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methan | 98.36 | |
| PF14583 | 386 | Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C | 98.35 | |
| PF14583 | 386 | Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C | 98.33 | |
| KOG2066|consensus | 846 | 98.32 | ||
| PF04053 | 443 | Coatomer_WDAD: Coatomer WD associated region ; Int | 98.32 | |
| KOG1645|consensus | 463 | 98.27 | ||
| COG0823 | 425 | TolB Periplasmic component of the Tol biopolymer t | 98.23 | |
| KOG2114|consensus | 933 | 98.2 | ||
| PRK02888 | 635 | nitrous-oxide reductase; Validated | 98.12 | |
| KOG3621|consensus | 726 | 98.06 | ||
| PF04841 | 410 | Vps16_N: Vps16, N-terminal region; InterPro: IPR00 | 98.05 | |
| PF08596 | 395 | Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; | 98.04 | |
| COG0823 | 425 | TolB Periplasmic component of the Tol biopolymer t | 97.96 | |
| COG3386 | 307 | Gluconolactonase [Carbohydrate transport and metab | 97.96 | |
| KOG1008|consensus | 783 | 97.94 | ||
| COG3204 | 316 | Uncharacterized protein conserved in bacteria [Fun | 97.94 | |
| PF04841 | 410 | Vps16_N: Vps16, N-terminal region; InterPro: IPR00 | 97.94 | |
| KOG1008|consensus | 783 | 97.94 | ||
| PF14870 | 302 | PSII_BNR: Photosynthesis system II assembly factor | 97.93 | |
| PF08553 | 794 | VID27: VID27 cytoplasmic protein; InterPro: IPR013 | 97.9 | |
| PF02897 | 414 | Peptidase_S9_N: Prolyl oligopeptidase, N-terminal | 97.88 | |
| PF03178 | 321 | CPSF_A: CPSF A subunit region; InterPro: IPR004871 | 97.85 | |
| PF03178 | 321 | CPSF_A: CPSF A subunit region; InterPro: IPR004871 | 97.85 | |
| PF00780 | 275 | CNH: CNH domain; InterPro: IPR001180 Based on sequ | 97.81 | |
| TIGR03075 | 527 | PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methan | 97.8 | |
| COG3386 | 307 | Gluconolactonase [Carbohydrate transport and metab | 97.8 | |
| COG3391 | 381 | Uncharacterized conserved protein [Function unknow | 97.76 | |
| PRK13616 | 591 | lipoprotein LpqB; Provisional | 97.68 | |
| COG3490 | 366 | Uncharacterized protein conserved in bacteria [Fun | 97.63 | |
| PF00780 | 275 | CNH: CNH domain; InterPro: IPR001180 Based on sequ | 97.63 | |
| PF08553 | 794 | VID27: VID27 cytoplasmic protein; InterPro: IPR013 | 97.62 | |
| COG3490 | 366 | Uncharacterized protein conserved in bacteria [Fun | 97.61 | |
| PF14783 | 111 | BBS2_Mid: Ciliary BBSome complex subunit 2, middle | 97.61 | |
| KOG4499|consensus | 310 | 97.56 | ||
| PF15390 | 671 | DUF4613: Domain of unknown function (DUF4613) | 97.48 | |
| COG3391 | 381 | Uncharacterized conserved protein [Function unknow | 97.47 | |
| KOG4640|consensus | 665 | 97.45 | ||
| COG3204 | 316 | Uncharacterized protein conserved in bacteria [Fun | 97.41 | |
| PF14870 | 302 | PSII_BNR: Photosynthesis system II assembly factor | 97.41 | |
| PRK13616 | 591 | lipoprotein LpqB; Provisional | 97.37 | |
| smart00320 | 40 | WD40 WD40 repeats. Note that these repeats are per | 97.32 | |
| smart00320 | 40 | WD40 WD40 repeats. Note that these repeats are per | 97.31 | |
| KOG4640|consensus | 665 | 97.26 | ||
| COG3292 | 671 | Predicted periplasmic ligand-binding sensor domain | 97.17 | |
| PF05096 | 264 | Glu_cyclase_2: Glutamine cyclotransferase; InterPr | 97.17 | |
| PF10647 | 253 | Gmad1: Lipoprotein LpqB beta-propeller domain; Int | 97.16 | |
| KOG4441|consensus | 571 | 97.16 | ||
| PRK13684 | 334 | Ycf48-like protein; Provisional | 97.15 | |
| KOG2395|consensus | 644 | 97.13 | ||
| PF14783 | 111 | BBS2_Mid: Ciliary BBSome complex subunit 2, middle | 97.12 | |
| PRK13684 | 334 | Ycf48-like protein; Provisional | 97.09 | |
| PF12894 | 47 | Apc4_WD40: Anaphase-promoting complex subunit 4 WD | 97.01 | |
| KOG4441|consensus | 571 | 96.97 | ||
| PF02897 | 414 | Peptidase_S9_N: Prolyl oligopeptidase, N-terminal | 96.97 | |
| PF14727 | 418 | PHTB1_N: PTHB1 N-terminus | 96.97 | |
| PHA02713 | 557 | hypothetical protein; Provisional | 96.95 | |
| KOG2444|consensus | 238 | 96.9 | ||
| KOG2079|consensus | 1206 | 96.9 | ||
| KOG2079|consensus | 1206 | 96.84 | ||
| PF15390 | 671 | DUF4613: Domain of unknown function (DUF4613) | 96.72 | |
| PHA02713 | 557 | hypothetical protein; Provisional | 96.68 | |
| TIGR03074 | 764 | PQQ_membr_DH membrane-bound PQQ-dependent dehydrog | 96.54 | |
| COG5276 | 370 | Uncharacterized conserved protein [Function unknow | 96.54 | |
| PF14655 | 415 | RAB3GAP2_N: Rab3 GTPase-activating protein regulat | 96.52 | |
| KOG2395|consensus | 644 | 96.52 | ||
| KOG2444|consensus | 238 | 96.48 | ||
| PF12894 | 47 | Apc4_WD40: Anaphase-promoting complex subunit 4 WD | 96.47 | |
| PF07995 | 331 | GSDH: Glucose / Sorbosone dehydrogenase; InterPro: | 96.45 | |
| KOG2280|consensus | 829 | 96.34 | ||
| PF05096 | 264 | Glu_cyclase_2: Glutamine cyclotransferase; InterPr | 96.26 | |
| COG5290 | 1243 | IkappaB kinase complex, IKAP component [Transcript | 96.1 | |
| PF10647 | 253 | Gmad1: Lipoprotein LpqB beta-propeller domain; Int | 96.1 | |
| KOG2280|consensus | 829 | 96.1 | ||
| PHA03098 | 534 | kelch-like protein; Provisional | 96.07 | |
| PF05694 | 461 | SBP56: 56kDa selenium binding protein (SBP56); Int | 96.06 | |
| PF12234 | 631 | Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR0 | 96.05 | |
| KOG4499|consensus | 310 | 95.92 | ||
| PHA03098 | 534 | kelch-like protein; Provisional | 95.9 | |
| PRK10115 | 686 | protease 2; Provisional | 95.89 | |
| TIGR03118 | 336 | PEPCTERM_chp_1 conserved hypothetical protein TIGR | 95.84 | |
| PF07995 | 331 | GSDH: Glucose / Sorbosone dehydrogenase; InterPro: | 95.72 | |
| COG5276 | 370 | Uncharacterized conserved protein [Function unknow | 95.47 | |
| TIGR03074 | 764 | PQQ_membr_DH membrane-bound PQQ-dependent dehydrog | 95.45 | |
| KOG1898|consensus | 1205 | 95.3 | ||
| PLN00033 | 398 | photosystem II stability/assembly factor; Provisio | 95.26 | |
| PHA02790 | 480 | Kelch-like protein; Provisional | 95.24 | |
| PF13449 | 326 | Phytase-like: Esterase-like activity of phytase | 95.22 | |
| COG4590 | 733 | ABC-type uncharacterized transport system, permeas | 95.13 | |
| KOG2377|consensus | 657 | 95.02 | ||
| PF10313 | 43 | DUF2415: Uncharacterised protein domain (DUF2415); | 94.96 | |
| TIGR02604 | 367 | Piru_Ver_Nterm putative membrane-bound dehydrogena | 94.93 | |
| KOG2377|consensus | 657 | 94.84 | ||
| PF14761 | 215 | HPS3_N: Hermansky-Pudlak syndrome 3 | 94.81 | |
| PLN00033 | 398 | photosystem II stability/assembly factor; Provisio | 94.72 | |
| KOG1983|consensus | 993 | 94.67 | ||
| KOG4659|consensus | 1899 | 94.66 | ||
| TIGR02604 | 367 | Piru_Ver_Nterm putative membrane-bound dehydrogena | 94.42 | |
| KOG3616|consensus | 1636 | 94.32 | ||
| COG3823 | 262 | Glutamine cyclotransferase [Posttranslational modi | 94.26 | |
| PF05694 | 461 | SBP56: 56kDa selenium binding protein (SBP56); Int | 94.19 | |
| COG5167 | 776 | VID27 Protein involved in vacuole import and degra | 94.05 | |
| KOG3630|consensus | 1405 | 94.04 | ||
| COG4257 | 353 | Vgb Streptogramin lyase [Defense mechanisms] | 93.89 | |
| PF08728 | 717 | CRT10: CRT10; InterPro: IPR014839 CRT10 is a trans | 93.77 | |
| COG1520 | 370 | FOG: WD40-like repeat [Function unknown] | 93.76 | |
| PF10168 | 717 | Nup88: Nuclear pore component; InterPro: IPR019321 | 93.75 | |
| COG4590 | 733 | ABC-type uncharacterized transport system, permeas | 93.71 | |
| PF12234 | 631 | Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR0 | 93.59 | |
| PHA02790 | 480 | Kelch-like protein; Provisional | 93.38 | |
| KOG3630|consensus | 1405 | 93.28 | ||
| PF07250 | 243 | Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterP | 93.28 | |
| PF07569 | 219 | Hira: TUP1-like enhancer of split; InterPro: IPR01 | 93.26 | |
| PF08728 | 717 | CRT10: CRT10; InterPro: IPR014839 CRT10 is a trans | 93.23 | |
| PF14655 | 415 | RAB3GAP2_N: Rab3 GTPase-activating protein regulat | 93.01 | |
| KOG1916|consensus | 1283 | 92.95 | ||
| PF10313 | 43 | DUF2415: Uncharacterised protein domain (DUF2415); | 92.92 | |
| PF07569 | 219 | Hira: TUP1-like enhancer of split; InterPro: IPR01 | 92.67 | |
| PF14727 | 418 | PHTB1_N: PTHB1 N-terminus | 92.53 | |
| PF11725 | 1774 | AvrE: Pathogenicity factor; InterPro: IPR021085 Th | 92.01 | |
| PF13449 | 326 | Phytase-like: Esterase-like activity of phytase | 91.97 | |
| COG5167 | 776 | VID27 Protein involved in vacuole import and degra | 91.84 | |
| KOG1916|consensus | 1283 | 91.65 | ||
| KOG3616|consensus | 1636 | 91.34 | ||
| TIGR03032 | 335 | conserved hypothetical protein TIGR03032. This pro | 90.98 | |
| PF10168 | 717 | Nup88: Nuclear pore component; InterPro: IPR019321 | 90.93 | |
| KOG1900|consensus | 1311 | 90.85 | ||
| PF14781 | 136 | BBS2_N: Ciliary BBSome complex subunit 2, N-termin | 90.55 | |
| PF12657 | 173 | TFIIIC_delta: Transcription factor IIIC subunit de | 90.1 | |
| KOG2247|consensus | 615 | 89.96 | ||
| COG5290 | 1243 | IkappaB kinase complex, IKAP component [Transcript | 89.95 | |
| KOG4460|consensus | 741 | 89.52 | ||
| PF02333 | 381 | Phytase: Phytase; InterPro: IPR003431 Phytase (3.1 | 89.36 | |
| KOG2247|consensus | 615 | 88.24 | ||
| PF14781 | 136 | BBS2_N: Ciliary BBSome complex subunit 2, N-termin | 88.16 | |
| PRK14131 | 376 | N-acetylneuraminic acid mutarotase; Provisional | 87.72 | |
| PF12768 | 281 | Rax2: Cortical protein marker for cell polarity | 87.59 | |
| PF12768 | 281 | Rax2: Cortical protein marker for cell polarity | 87.48 | |
| TIGR03606 | 454 | non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH | 87.48 | |
| PRK10115 | 686 | protease 2; Provisional | 87.45 | |
| KOG2103|consensus | 910 | 87.24 | ||
| PF11725 | 1774 | AvrE: Pathogenicity factor; InterPro: IPR021085 Th | 87.12 | |
| COG4257 | 353 | Vgb Streptogramin lyase [Defense mechanisms] | 87.05 | |
| KOG4460|consensus | 741 | 86.63 | ||
| PF14761 | 215 | HPS3_N: Hermansky-Pudlak syndrome 3 | 86.36 | |
| PF12657 | 173 | TFIIIC_delta: Transcription factor IIIC subunit de | 86.19 | |
| TIGR02276 | 42 | beta_rpt_yvtn 40-residue YVTN family beta-propelle | 86.11 | |
| KOG1900|consensus | 1311 | 85.52 | ||
| TIGR03606 | 454 | non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH | 85.3 | |
| PF10214 | 765 | Rrn6: RNA polymerase I-specific transcription-init | 85.09 | |
| COG3292 | 671 | Predicted periplasmic ligand-binding sensor domain | 84.84 | |
| PRK13613 | 599 | lipoprotein LpqB; Provisional | 83.4 | |
| KOG1898|consensus | 1205 | 83.2 | ||
| PF11715 | 547 | Nup160: Nucleoporin Nup120/160; InterPro: IPR02171 | 82.6 | |
| PF07676 | 39 | PD40: WD40-like Beta Propeller Repeat; InterPro: I | 82.5 | |
| KOG4659|consensus | 1899 | 82.33 | ||
| TIGR03032 | 335 | conserved hypothetical protein TIGR03032. This pro | 82.21 | |
| PLN02153 | 341 | epithiospecifier protein | 81.6 | |
| PF07676 | 39 | PD40: WD40-like Beta Propeller Repeat; InterPro: I | 81.51 | |
| PLN02153 | 341 | epithiospecifier protein | 81.34 | |
| COG1520 | 370 | FOG: WD40-like repeat [Function unknown] | 81.09 | |
| PF07250 | 243 | Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterP | 80.99 |
| >KOG2048|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-71 Score=525.56 Aligned_cols=665 Identities=27% Similarity=0.444 Sum_probs=569.0
Q ss_pred CcCCCCccceeeeeeeeccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe-CCE
Q psy12614 5 CKKRNTMGTYGVHNIKFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF-NDR 83 (708)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~-~~~ 83 (708)
+++...++.+.+|+|||+..-|..|+|+||+.+.+.||++..+|.|.||++..+.++...+.|+. ++.|.+++|+ +.+
T Consensus 4 ~~~~~s~~~m~vhrcrf~d~~Ps~I~slA~s~kS~~lAvsRt~g~IEiwN~~~~w~~~~vi~g~~-drsIE~L~W~e~~R 82 (691)
T KOG2048|consen 4 KKEPQSRGKMQVHRCRFVDYKPSEIVSLAYSHKSNQLAVSRTDGNIEIWNLSNNWFLEPVIHGPE-DRSIESLAWAEGGR 82 (691)
T ss_pred ccCCcccceeEEEEEEEEeeeccceEEEEEeccCCceeeeccCCcEEEEccCCCceeeEEEecCC-CCceeeEEEccCCe
Confidence 45566788999999999999999999999999999999999999999999999999999999988 8999999999 999
Q ss_pred EEEEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEE
Q psy12614 84 LFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAW 163 (708)
Q Consensus 84 l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~ 163 (708)
|++.+.+|.|..||+.+++++..+....+.||+++.+|.+..++.|++||.+..++...+++.+...+....++|.++.|
T Consensus 83 LFS~g~sg~i~EwDl~~lk~~~~~d~~gg~IWsiai~p~~~~l~IgcddGvl~~~s~~p~~I~~~r~l~rq~sRvLslsw 162 (691)
T KOG2048|consen 83 LFSSGLSGSITEWDLHTLKQKYNIDSNGGAIWSIAINPENTILAIGCDDGVLYDFSIGPDKITYKRSLMRQKSRVLSLSW 162 (691)
T ss_pred EEeecCCceEEEEecccCceeEEecCCCcceeEEEeCCccceEEeecCCceEEEEecCCceEEEEeecccccceEEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999998999988999999999
Q ss_pred CCCCCEEEEecCC-eEEEEEcCCCceEEEEEecc--cCCCCCceeEEEEEEccCCEEEEEcCCCcEEEEeCCCCeeEEEe
Q psy12614 164 HSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDK--SSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDV 240 (708)
Q Consensus 164 s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~ 240 (708)
+|++..|++|+.| .|++||+.++..+......- ... +....|+++.|..++++++|++.|.|.+||...+.+++.+
T Consensus 163 ~~~~~~i~~Gs~Dg~Iriwd~~~~~t~~~~~~~~d~l~k-~~~~iVWSv~~Lrd~tI~sgDS~G~V~FWd~~~gTLiqS~ 241 (691)
T KOG2048|consen 163 NPTGTKIAGGSIDGVIRIWDVKSGQTLHIITMQLDRLSK-REPTIVWSVLFLRDSTIASGDSAGTVTFWDSIFGTLIQSH 241 (691)
T ss_pred cCCccEEEecccCceEEEEEcCCCceEEEeeeccccccc-CCceEEEEEEEeecCcEEEecCCceEEEEcccCcchhhhh
Confidence 9999999999999 89999999998877333221 111 2478899999999999999999999999999999999999
Q ss_pred eccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEeCCEEEEEcC
Q psy12614 241 KTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALHGNRLYSGGL 320 (708)
Q Consensus 241 ~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~s~~~ 320 (708)
..|.+.|.+++.+++++++++++.|+.|..|...+ +. .+|........|.+.|++++..+..+++|+.
T Consensus 242 ~~h~adVl~Lav~~~~d~vfsaGvd~~ii~~~~~~--------~~----~~wv~~~~r~~h~hdvrs~av~~~~l~sgG~ 309 (691)
T KOG2048|consen 242 SCHDADVLALAVADNEDRVFSAGVDPKIIQYSLTT--------NK----SEWVINSRRDLHAHDVRSMAVIENALISGGR 309 (691)
T ss_pred hhhhcceeEEEEcCCCCeEEEccCCCceEEEEecC--------Cc----cceeeeccccCCcccceeeeeecceEEecce
Confidence 99999999999999999999999999999999988 43 4598888999999999999999889999999
Q ss_pred CCeEEEEeCCCCce--eecCccCCCCceEEEEcCCcEEEEEcCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEE
Q psy12614 321 DSYLSLSYYPPKTL--VKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKM 398 (708)
Q Consensus 321 d~~i~iw~~~~~~~--~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (708)
|..+.+-....... .......+....+..+|..++++......+.+|.+.+.. ..| +.....+.++
T Consensus 310 d~~l~i~~s~~~~~~~h~~~~~~p~~~~v~~a~~~~L~~~w~~h~v~lwrlGS~~---~~g---------~~~~~~Llkl 377 (691)
T KOG2048|consen 310 DFTLAICSSREFKNMDHRQKNLFPASDRVSVAPENRLLVLWKAHGVDLWRLGSVI---LQG---------EYNYIHLLKL 377 (691)
T ss_pred eeEEEEccccccCchhhhccccccccceeecCccceEEEEeccccccceeccCcc---ccc---------ccChhhheee
Confidence 99999877665331 113334566677888899999999999999999998853 111 2245578888
Q ss_pred EecCCCceEEEEeCCCCcEEEEEcCCceEEEEEEecCCcceeEEeecCCcccccceeEEEEEecCCCeEEEEecCCc---
Q psy12614 399 SAVNNATIRCSVVSNDGKYVAYSTESCVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVLISADSTLLLAVSLNGP--- 475 (708)
Q Consensus 399 ~~~~~~~i~~~~~s~~g~~l~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~~~~~dg~--- 475 (708)
..+....|.+.++||+|++|+.+.-..++||.+.... .+....+...+.... ..+.+.|+-|+..++.++.+-.
T Consensus 378 ~~k~~~nIs~~aiSPdg~~Ia~st~~~~~iy~L~~~~-~vk~~~v~~~~~~~~--~a~~i~ftid~~k~~~~s~~~~~le 454 (691)
T KOG2048|consen 378 FTKEKENISCAAISPDGNLIAISTVSRTKIYRLQPDP-NVKVINVDDVPLALL--DASAISFTIDKNKLFLVSKNIFSLE 454 (691)
T ss_pred ecCCccceeeeccCCCCCEEEEeeccceEEEEeccCc-ceeEEEeccchhhhc--cceeeEEEecCceEEEEecccceeE
Confidence 8889999999999999999999998899999999755 555555554554433 5566899999998888884443
Q ss_pred EEEecCCCeEEEEEecCCCCCccCcceEEEEECCCCcEEEEEecCCeEEEEECCceee--ecCCCCCCceEEEEcC-CCC
Q psy12614 476 LYIIDLSSLEIKYCVDPYKSNLMSDVISLVQMSECKQYIVCADRKSHVVIWKNGQHHA--SLPRYRKPSTAMAIHP-TLS 552 (708)
Q Consensus 476 i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~--~~~~~~~~v~~l~~s~-d~~ 552 (708)
++++++.+.+.+..+... +. ...|+.++.||+|+|+|+.+.+|.|.+|++++... ........|++++|+| +.+
T Consensus 455 ~~el~~ps~kel~~~~~~-~~--~~~I~~l~~SsdG~yiaa~~t~g~I~v~nl~~~~~~~l~~rln~~vTa~~~~~~~~~ 531 (691)
T KOG2048|consen 455 EFELETPSFKELKSIQSQ-AK--CPSISRLVVSSDGNYIAAISTRGQIFVYNLETLESHLLKVRLNIDVTAAAFSPFVRN 531 (691)
T ss_pred EEEecCcchhhhhccccc-cC--CCcceeEEEcCCCCEEEEEeccceEEEEEcccceeecchhccCcceeeeeccccccC
Confidence 666677766666666544 23 67899999999999999999999999999995544 3336668999999995 667
Q ss_pred EEEEEecCCcEEEEEcCCCCCCchhhhhhccCchhhhcCCCCeeEEEeCCCCCceEEEEcCeeEEEEecCCCCCcccCcc
Q psy12614 553 TLVTVYSDHRIVEFDLNRKAFTTFSRKLETNHPNEWLSRQLPVLGIEFDPQDSSLIYLMDDSALCVINKNKSLAHADAKI 632 (708)
Q Consensus 553 ~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~ 632 (708)
.|+.+..|++++-||++..+...|++.+...++..+.....++..+.|.|..+..+...+.+.+++.|.+.+.|..+...
T Consensus 532 ~lvvats~nQv~efdi~~~~l~~ws~~nt~nlpk~~~~l~~~~~gisfd~~n~s~~~~~~a~w~~~id~~~~lp~~~~~~ 611 (691)
T KOG2048|consen 532 RLVVATSNNQVFEFDIEARNLTRWSKNNTRNLPKEPKTLIPGIPGISFDPKNSSRFIVYDAHWSCLIDFSLPLPSDEDGP 611 (691)
T ss_pred cEEEEecCCeEEEEecchhhhhhhhhccccccccChhhcCCCCceEEeCCCCccEEEEEcCcEEEEEecCCCCCchhhcc
Confidence 89999999999999999999999999999889999999999999999999999999999999999999999998776554
Q ss_pred ccCCCCCCCCCCCC---------CccccccceeeEEEecCcceEEEeecCCCcEEEEee-ChhhhhhcCCC-ceeeeeee
Q psy12614 633 PRLGPKVVSGDSSN---------STHVIESKVAFHFVRRNKHLVYFGSLNDKEMLSVQV-NPLSFMEKLPP-TWTLTLVV 701 (708)
Q Consensus 633 ~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-p~~~~~~~~p~-~~~~~~~~ 701 (708)
.+..+ +..|.+.. .+...+....|+++..|+|+|+.+.++++|++++|| |+.++..++|+ ||+|||||
T Consensus 612 ~~~~~-kt~egn~~~~~~~g~~l~~~~~~~~~~f~~t~~y~pllfv~~ls~nel~~ver~pl~d~~~~~p~~~f~~kKFG 690 (691)
T KOG2048|consen 612 LKALK-KTREGNLTRLLVNGNRLREYGEENGDGFKITKKYRPLLFVGLLSPNELVNVERVPLEDTGKSLPPTPFKRKKFG 690 (691)
T ss_pred cccCC-cccccchhhhhcccccchhhcccCCcccceeccccceeeecccCCcceEEEEecchHHhhccCCCCcceecccC
Confidence 44222 11121111 123455566799999999999999999999999999 99999999876 89999998
Q ss_pred c
Q psy12614 702 G 702 (708)
Q Consensus 702 ~ 702 (708)
.
T Consensus 691 ~ 691 (691)
T KOG2048|consen 691 T 691 (691)
T ss_pred C
Confidence 4
|
|
| >KOG0319|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-59 Score=451.58 Aligned_cols=539 Identities=14% Similarity=0.178 Sum_probs=454.4
Q ss_pred CCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEec-CCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECCC
Q psy12614 24 PEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIG-DPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMRR 100 (708)
Q Consensus 24 ~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~-h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~ 100 (708)
.-+..|++++++||+++|++++..+.+++|++.+++.++ .+.. |. +||.-++|+ +..|++|+.|+.+++||+..
T Consensus 60 ed~d~ita~~l~~d~~~L~~a~rs~llrv~~L~tgk~ir-swKa~He--~Pvi~ma~~~~g~LlAtggaD~~v~VWdi~~ 136 (775)
T KOG0319|consen 60 EDEDEITALALTPDEEVLVTASRSQLLRVWSLPTGKLIR-SWKAIHE--APVITMAFDPTGTLLATGGADGRVKVWDIKN 136 (775)
T ss_pred cchhhhheeeecCCccEEEEeeccceEEEEEcccchHhH-hHhhccC--CCeEEEEEcCCCceEEeccccceEEEEEeeC
Confidence 346789999999999999999999999999999999887 6666 98 999999999 88999999999999999999
Q ss_pred CeEeEEEeecCCceEEEEEecCCC--EEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-e
Q psy12614 101 LNIKSSTAVTSGTCWCLSVHKKKR--LLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-A 177 (708)
Q Consensus 101 ~~~~~~~~~~~~~v~~~~~s~~~~--~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~ 177 (708)
+.+.+.+++|++.|.++.|+|+-+ .|++|..|+.+++||+.+... ....+..|...|++++|++|+..++++++| .
T Consensus 137 ~~~th~fkG~gGvVssl~F~~~~~~~lL~sg~~D~~v~vwnl~~~~t-cl~~~~~H~S~vtsL~~~~d~~~~ls~~RDkv 215 (775)
T KOG0319|consen 137 GYCTHSFKGHGGVVSSLLFHPHWNRWLLASGATDGTVRVWNLNDKRT-CLHTMILHKSAVTSLAFSEDSLELLSVGRDKV 215 (775)
T ss_pred CEEEEEecCCCceEEEEEeCCccchhheeecCCCceEEEEEcccCch-HHHHHHhhhhheeeeeeccCCceEEEeccCcE
Confidence 999999999999999999999765 488999999999999996554 126788999999999999999999999999 9
Q ss_pred EEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccC-----C-EEEEEcCCCcEEEEeCCCCeeEEEeecc-ccCeEEE
Q psy12614 178 VRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCAD-----F-TIITGDSGGFVRFWDGKTGVQWSDVKTH-KKDILAL 250 (708)
Q Consensus 178 i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-----~-~l~~~~~dg~i~~wd~~~~~~~~~~~~~-~~~i~~~ 250 (708)
+.+||+.+-+....++. ...+.++.+.++ | .+++.+.+|.+++||.++++++...... ...+..+
T Consensus 216 i~vwd~~~~~~l~~lp~--------ye~~E~vv~l~~~~~~~~~~~~TaG~~g~~~~~d~es~~~~~~~~~~~~~e~~~~ 287 (775)
T KOG0319|consen 216 IIVWDLVQYKKLKTLPL--------YESLESVVRLREELGGKGEYIITAGGSGVVQYWDSESGKCVYKQRQSDSEEIDHL 287 (775)
T ss_pred EEEeehhhhhhhheech--------hhheeeEEEechhcCCcceEEEEecCCceEEEEecccchhhhhhccCCchhhhcc
Confidence 99999987777777654 456777777776 4 3889999999999999998876554322 3336667
Q ss_pred EEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEeC---CEEEEEcCCCeEEEE
Q psy12614 251 TVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALHG---NRLYSGGLDSYLSLS 327 (708)
Q Consensus 251 ~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~~---~~l~s~~~d~~i~iw 327 (708)
...+..+.++..+.|..+.+||.++ .+ ....+.+..+.|..++|-| ++|+.++..+.+|+|
T Consensus 288 ~~~~~~~~~l~vtaeQnl~l~d~~~--------l~--------i~k~ivG~ndEI~Dm~~lG~e~~~laVATNs~~lr~y 351 (775)
T KOG0319|consen 288 LAIESMSQLLLVTAEQNLFLYDEDE--------LT--------IVKQIVGYNDEILDMKFLGPEESHLAVATNSPELRLY 351 (775)
T ss_pred eeccccCceEEEEccceEEEEEccc--------cE--------EehhhcCCchhheeeeecCCccceEEEEeCCCceEEE
Confidence 6667667788888899999999888 54 6677888999999999984 899999999999999
Q ss_pred eCCCCceeecCccCCCCceEEEEcCCcEEEEE-cCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCce
Q psy12614 328 YYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQ-YTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATI 406 (708)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~-~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 406 (708)
+..+....-+.++.....++....+|.+++++ .|+++.+|.++++. ....+.....+|.+.|
T Consensus 352 ~~~~~~c~ii~GH~e~vlSL~~~~~g~llat~sKD~svilWr~~~~~-----------------~~~~~~a~~~gH~~sv 414 (775)
T KOG0319|consen 352 TLPTSYCQIIPGHTEAVLSLDVWSSGDLLATGSKDKSVILWRLNNNC-----------------SKSLCVAQANGHTNSV 414 (775)
T ss_pred ecCCCceEEEeCchhheeeeeecccCcEEEEecCCceEEEEEecCCc-----------------chhhhhhhhccccccc
Confidence 99998888777777777777777888888874 89999999996544 2223455566899999
Q ss_pred EEEEeCCCCc-EEEE-EcCCceEEEEEEecCCcceeEEe-ecCCcccccceeEEEEEecCCCeEEEEecCCc--EEEecC
Q psy12614 407 RCSVVSNDGK-YVAY-STESCVRLHSLDLDGDKPQISRI-KNLPAPLFKSIFTHVLISADSTLLLAVSLNGP--LYIIDL 481 (708)
Q Consensus 407 ~~~~~s~~g~-~l~~-~~d~~i~i~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~s~d~~~l~~~~~dg~--i~~~~~ 481 (708)
.+++++..+. ++++ +.|+++++|++...+.......+ .....+.....|++++++|+.+++|+++.|.+ ||+++.
T Consensus 415 gava~~~~~asffvsvS~D~tlK~W~l~~s~~~~~~~~~~~~~t~~aHdKdIN~Vaia~ndkLiAT~SqDktaKiW~le~ 494 (775)
T KOG0319|consen 415 GAVAGSKLGASFFVSVSQDCTLKLWDLPKSKETAFPIVLTCRYTERAHDKDINCVAIAPNDKLIATGSQDKTAKIWDLEQ 494 (775)
T ss_pred ceeeecccCccEEEEecCCceEEEecCCCcccccccceehhhHHHHhhcccccceEecCCCceEEecccccceeeecccC
Confidence 9999987664 5555 55999999999862221111110 00111111457888999999999999999999 999994
Q ss_pred CCeEEEEEecCCCCCccCcceEEEEECCCCcEEEEEecCCeEEEEECCceee--ecCCCCCCceEEEEcCCCCEEEEEec
Q psy12614 482 SSLEIKYCVDPYKSNLMSDVISLVQMSECKQYIVCADRKSHVVIWKNGQHHA--SLPRYRKPSTAMAIHPTLSTLVTVYS 559 (708)
Q Consensus 482 ~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~--~~~~~~~~v~~l~~s~d~~~l~~~~~ 559 (708)
. ..+..+. || ...|.++.|+|..+.||++|.|++|+||.+.+..| ++.||...|..+.|-.+++.|++++.
T Consensus 495 ~--~l~~vLs---GH--~RGvw~V~Fs~~dq~laT~SgD~TvKIW~is~fSClkT~eGH~~aVlra~F~~~~~qliS~~a 567 (775)
T KOG0319|consen 495 L--RLLGVLS---GH--TRGVWCVSFSKNDQLLATCSGDKTVKIWSISTFSCLKTFEGHTSAVLRASFIRNGKQLISAGA 567 (775)
T ss_pred c--eEEEEee---CC--ccceEEEEeccccceeEeccCCceEEEEEeccceeeeeecCccceeEeeeeeeCCcEEEeccC
Confidence 4 5666654 77 88999999999999999999999999999998877 99999999999999999999999999
Q ss_pred CCcEEEEEcCCCCCCchhhhhhccCchhhhcCCCCeeEEEeCCCCCceEEEEcCeeEEEEecCCCC
Q psy12614 560 DHRIVEFDLNRKAFTTFSRKLETNHPNEWLSRQLPVLGIEFDPQDSSLIYLMDDSALCVINKNKSL 625 (708)
Q Consensus 560 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~~~~l~~~~~d~~i~~wd~~~~~ 625 (708)
||-+++|++.++++. ..+.+|.++|++++.++.+.+++||+.||.|.+|.=....
T Consensus 568 dGliKlWnikt~eC~-----------~tlD~H~DrvWaL~~~~~~~~~~tgg~Dg~i~~wkD~Te~ 622 (775)
T KOG0319|consen 568 DGLIKLWNIKTNECE-----------MTLDAHNDRVWALSVSPLLDMFVTGGGDGRIIFWKDVTEE 622 (775)
T ss_pred CCcEEEEeccchhhh-----------hhhhhccceeEEEeecCccceeEecCCCeEEEEeecCcHH
Confidence 999999999999988 7889999999999999999999999999999999554443
|
|
| >KOG0318|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-56 Score=414.74 Aligned_cols=490 Identities=18% Similarity=0.224 Sum_probs=397.5
Q ss_pred eeeeeccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCC-CCeEEEEEecCCCCCcEEEEEEe--CC-----------
Q psy12614 17 HNIKFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISE-TPHVDRVFIGDPLSNSIECLTWF--ND----------- 82 (708)
Q Consensus 17 ~~~~~~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~-~~~~~~~~~~h~~~~~v~~l~~~--~~----------- 82 (708)
..+..+.+|...++-..|||.|-|+|+|...|.|+|||... ...+...++.-. ++|..|+|+ ++
T Consensus 50 ~~~~iYtEH~~~vtVAkySPsG~yiASGD~sG~vRIWdtt~~~hiLKnef~v~a--G~I~Di~Wd~ds~RI~avGEGrer 127 (603)
T KOG0318|consen 50 ASVDIYTEHAHQVTVAKYSPSGFYIASGDVSGKVRIWDTTQKEHILKNEFQVLA--GPIKDISWDFDSKRIAAVGEGRER 127 (603)
T ss_pred cceeeeccccceeEEEEeCCCceEEeecCCcCcEEEEeccCcceeeeeeeeecc--cccccceeCCCCcEEEEEecCccc
Confidence 34677999999999999999999999999999999999977 333444555444 677777776 33
Q ss_pred ----------------------------------EEEEEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEE
Q psy12614 83 ----------------------------------RLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAA 128 (708)
Q Consensus 83 ----------------------------------~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~ 128 (708)
++++++.|++|.+|+=..-+-..++..|..-|.|+.|+|||.++|+
T Consensus 128 fg~~F~~DSG~SvGei~GhSr~ins~~~KpsRPfRi~T~sdDn~v~ffeGPPFKFk~s~r~HskFV~~VRysPDG~~Fat 207 (603)
T KOG0318|consen 128 FGHVFLWDSGNSVGEITGHSRRINSVDFKPSRPFRIATGSDDNTVAFFEGPPFKFKSSFREHSKFVNCVRYSPDGSRFAT 207 (603)
T ss_pred eeEEEEecCCCccceeeccceeEeeeeccCCCceEEEeccCCCeEEEeeCCCeeeeecccccccceeeEEECCCCCeEEE
Confidence 5666666666666665555556667789999999999999999999
Q ss_pred EeCCCcEEEEEccCCcEEEEEecc---cccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCce
Q psy12614 129 GTEQGHINLFQISDEGLLYEKLLD---RQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNT 204 (708)
Q Consensus 129 ~~~d~~i~iwd~~~~~~~~~~~~~---~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 204 (708)
++.||.+.+||-.+++.+ ..+. +|++.|.+++|+||++.+++++.| +++|||+.+.++++++..+.. ...
T Consensus 208 ~gsDgki~iyDGktge~v--g~l~~~~aHkGsIfalsWsPDs~~~~T~SaDkt~KIWdVs~~slv~t~~~~~~----v~d 281 (603)
T KOG0318|consen 208 AGSDGKIYIYDGKTGEKV--GELEDSDAHKGSIFALSWSPDSTQFLTVSADKTIKIWDVSTNSLVSTWPMGST----VED 281 (603)
T ss_pred ecCCccEEEEcCCCccEE--EEecCCCCccccEEEEEECCCCceEEEecCCceEEEEEeeccceEEEeecCCc----hhc
Confidence 999999999999999987 5555 899999999999999999999999 999999999999999988752 124
Q ss_pred eEEEEEEccCCEEEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCC
Q psy12614 205 AVWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSG 284 (708)
Q Consensus 205 ~v~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g 284 (708)
....+.|. ++.|++.+.+|.|.+++...+..+..+.+|...|++++.+||+++|++|+.||.|.-|+..+ |
T Consensus 282 qqvG~lWq-kd~lItVSl~G~in~ln~~d~~~~~~i~GHnK~ITaLtv~~d~~~i~SgsyDG~I~~W~~~~--------g 352 (603)
T KOG0318|consen 282 QQVGCLWQ-KDHLITVSLSGTINYLNPSDPSVLKVISGHNKSITALTVSPDGKTIYSGSYDGHINSWDSGS--------G 352 (603)
T ss_pred eEEEEEEe-CCeEEEEEcCcEEEEecccCCChhheecccccceeEEEEcCCCCEEEeeccCceEEEEecCC--------c
Confidence 44455555 66799999999999999999999999999999999999999999999999999999999998 6
Q ss_pred CCCCCcceEEeEEE--eccccceEEEEEe-CCEEEEEcCCCeEEEEeCCCCceeecC--ccCCCCceEEEEcCCcEEEEE
Q psy12614 285 PEQGSSVWVRSVNR--VIHEGDVKSLALH-GNRLYSGGLDSYLSLSYYPPKTLVKYP--CTLAQSTPVSLAKDIQHVLLQ 359 (708)
Q Consensus 285 ~~~~~~~~~~~~~~--~~~~~~v~~l~~~-~~~l~s~~~d~~i~iw~~~~~~~~~~~--~~~~~~~~~~~s~~~~~l~~~ 359 (708)
. ...+ .+|...|.+++.+ ...+++.+.|.++++.++......... ....++.+++..+++.+++..
T Consensus 353 ~---------~~~~~g~~h~nqI~~~~~~~~~~~~t~g~Dd~l~~~~~~~~~~t~~~~~~lg~QP~~lav~~d~~~avv~ 423 (603)
T KOG0318|consen 353 T---------SDRLAGKGHTNQIKGMAASESGELFTIGWDDTLRVISLKDNGYTKSEVVKLGSQPKGLAVLSDGGTAVVA 423 (603)
T ss_pred c---------ccccccccccceEEEEeecCCCcEEEEecCCeEEEEecccCcccccceeecCCCceeEEEcCCCCEEEEE
Confidence 4 2223 6799999999999 589999999999999998766543332 234566789999998888887
Q ss_pred cCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEEEc-CCceEEEEEEecCCcc
Q psy12614 360 YTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYST-ESCVRLHSLDLDGDKP 438 (708)
Q Consensus 360 ~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~-d~~i~i~~~~~~~~~~ 438 (708)
....|.+..-.+ .+... .......++|++|+++.+|+|. |+.++||.+......-
T Consensus 424 ~~~~iv~l~~~~----------------------~~~~~--~~~y~~s~vAv~~~~~~vaVGG~Dgkvhvysl~g~~l~e 479 (603)
T KOG0318|consen 424 CISDIVLLQDQT----------------------KVSSI--PIGYESSAVAVSPDGSEVAVGGQDGKVHVYSLSGDELKE 479 (603)
T ss_pred ecCcEEEEecCC----------------------cceee--ccccccceEEEcCCCCEEEEecccceEEEEEecCCcccc
Confidence 777777766333 12222 2345568999999999999955 9999999998633211
Q ss_pred eeEEeecCCcccccceeEEEEEecCCCeEEEEecCCc--EEEecCCCeEEEEEecCCCCCccCcceEEEEECCCCcEEEE
Q psy12614 439 QISRIKNLPAPLFKSIFTHVLISADSTLLLAVSLNGP--LYIIDLSSLEIKYCVDPYKSNLMSDVISLVQMSECKQYIVC 516 (708)
Q Consensus 439 ~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~~~~~dg~--i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~ 516 (708)
.. ++..|.. .|++++||||+.+||++...+. +|++.+... ...+..+|...|++++|+|++.++|+
T Consensus 480 e~----~~~~h~a--~iT~vaySpd~~yla~~Da~rkvv~yd~~s~~~------~~~~w~FHtakI~~~aWsP~n~~vAT 547 (603)
T KOG0318|consen 480 EA----KLLEHRA--AITDVAYSPDGAYLAAGDASRKVVLYDVASREV------KTNRWAFHTAKINCVAWSPNNKLVAT 547 (603)
T ss_pred ee----eeecccC--CceEEEECCCCcEEEEeccCCcEEEEEcccCce------ecceeeeeeeeEEEEEeCCCceEEEe
Confidence 11 1445544 8888999999999999999888 888887732 12222233889999999999999999
Q ss_pred EecCCeEEEEECCce---eeecCCCCCCceEEEEcCCCCEEEEEecCCcEEEEEcC
Q psy12614 517 ADRKSHVVIWKNGQH---HASLPRYRKPSTAMAIHPTLSTLVTVYSDHRIVEFDLN 569 (708)
Q Consensus 517 ~~~d~~i~iw~~~~~---~~~~~~~~~~v~~l~~s~d~~~l~~~~~dg~i~vwd~~ 569 (708)
|+-|-.|.||+++++ .....+|...|+.+.|- |...|++.+.|..|++|++.
T Consensus 548 GSlDt~Viiysv~kP~~~i~iknAH~~gVn~v~wl-de~tvvSsG~Da~iK~W~v~ 602 (603)
T KOG0318|consen 548 GSLDTNVIIYSVKKPAKHIIIKNAHLGGVNSVAWL-DESTVVSSGQDANIKVWNVT 602 (603)
T ss_pred ccccceEEEEEccChhhheEeccccccCceeEEEe-cCceEEeccCcceeEEeccc
Confidence 999999999999954 33667899899999998 67789999999999999875
|
|
| >KOG0319|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-54 Score=417.43 Aligned_cols=538 Identities=15% Similarity=0.192 Sum_probs=434.7
Q ss_pred eccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCe-EEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEE
Q psy12614 21 FYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPH-VDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYD 97 (708)
Q Consensus 21 ~~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~-~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd 97 (708)
|+.|.+ ++|+++|+.|++...| .|.+-|+.++.. +...-... ...+++++.. +.+|++++..+.+++|+
T Consensus 19 iYtGG~-----~~~s~nG~~L~t~~~d-~Vi~idv~t~~~~l~s~~~ed--~d~ita~~l~~d~~~L~~a~rs~llrv~~ 90 (775)
T KOG0319|consen 19 IYTGGP-----VAWSSNGQHLYTACGD-RVIIIDVATGSIALPSGSNED--EDEITALALTPDEEVLVTASRSQLLRVWS 90 (775)
T ss_pred eecCCc-----eeECCCCCEEEEecCc-eEEEEEccCCceecccCCccc--hhhhheeeecCCccEEEEeeccceEEEEE
Confidence 565554 8999999999998866 799999999887 33222233 3789999998 89999999999999999
Q ss_pred CCCCeEeEEEee-cCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCE--EEEec
Q psy12614 98 MRRLNIKSSTAV-TSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDY--LVTGC 174 (708)
Q Consensus 98 ~~~~~~~~~~~~-~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~--l~~~~ 174 (708)
+++++.++.++. |.++|.-++|+|.+..||+|+.|+.+++||+.++.+. ..|.+|++.|.++.|+|+-++ |++|.
T Consensus 91 L~tgk~irswKa~He~Pvi~ma~~~~g~LlAtggaD~~v~VWdi~~~~~t--h~fkG~gGvVssl~F~~~~~~~lL~sg~ 168 (775)
T KOG0319|consen 91 LPTGKLIRSWKAIHEAPVITMAFDPTGTLLATGGADGRVKVWDIKNGYCT--HSFKGHGGVVSSLLFHPHWNRWLLASGA 168 (775)
T ss_pred cccchHhHhHhhccCCCeEEEEEcCCCceEEeccccceEEEEEeeCCEEE--EEecCCCceEEEEEeCCccchhheeecC
Confidence 999999999997 9999999999999999999999999999999999998 899999999999999998754 78888
Q ss_pred CC-eEEEEEcCCCce-EEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEE
Q psy12614 175 AA-AVRVWDIHKGHA-IHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALT 251 (708)
Q Consensus 175 ~d-~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~ 251 (708)
.| ++++||+++... +..+. .|...|++++|++|+. +++++.|..+.+||+.+.+...+++ ....+.++.
T Consensus 169 ~D~~v~vwnl~~~~tcl~~~~-------~H~S~vtsL~~~~d~~~~ls~~RDkvi~vwd~~~~~~l~~lp-~ye~~E~vv 240 (775)
T KOG0319|consen 169 TDGTVRVWNLNDKRTCLHTMI-------LHKSAVTSLAFSEDSLELLSVGRDKVIIVWDLVQYKKLKTLP-LYESLESVV 240 (775)
T ss_pred CCceEEEEEcccCchHHHHHH-------hhhhheeeeeeccCCceEEEeccCcEEEEeehhhhhhhheec-hhhheeeEE
Confidence 89 999999986655 44443 3488999999999995 9999999999999998777777766 456677788
Q ss_pred EeCC-----CCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEecc-ccceEEEEEe--CCEEEEEcCCCe
Q psy12614 252 VSED-----ENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIH-EGDVKSLALH--GNRLYSGGLDSY 323 (708)
Q Consensus 252 ~s~~-----~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~v~~l~~~--~~~l~s~~~d~~ 323 (708)
+-++ +.++++++.+|.+++||..+ ++ ........ ...+..+... .+.++....|..
T Consensus 241 ~l~~~~~~~~~~~~TaG~~g~~~~~d~es--------~~--------~~~~~~~~~~~e~~~~~~~~~~~~~l~vtaeQn 304 (775)
T KOG0319|consen 241 RLREELGGKGEYIITAGGSGVVQYWDSES--------GK--------CVYKQRQSDSEEIDHLLAIESMSQLLLVTAEQN 304 (775)
T ss_pred EechhcCCcceEEEEecCCceEEEEeccc--------ch--------hhhhhccCCchhhhcceeccccCceEEEEccce
Confidence 8777 67999999999999999988 43 11111111 1224444333 567777788999
Q ss_pred EEEEeCCCCceee-cCccCCCCceEE-EEcCCcEEEE-EcCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEe
Q psy12614 324 LSLSYYPPKTLVK-YPCTLAQSTPVS-LAKDIQHVLL-QYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSA 400 (708)
Q Consensus 324 i~iw~~~~~~~~~-~~~~~~~~~~~~-~s~~~~~l~~-~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (708)
+.++|.++..+.+ +.+....+..+. +.|+.+++++ .+...+++|+..+.. ..+..
T Consensus 305 l~l~d~~~l~i~k~ivG~ndEI~Dm~~lG~e~~~laVATNs~~lr~y~~~~~~----------------------c~ii~ 362 (775)
T KOG0319|consen 305 LFLYDEDELTIVKQIVGYNDEILDMKFLGPEESHLAVATNSPELRLYTLPTSY----------------------CQIIP 362 (775)
T ss_pred EEEEEccccEEehhhcCCchhheeeeecCCccceEEEEeCCCceEEEecCCCc----------------------eEEEe
Confidence 9999988877443 444444555444 4577777777 577899999888754 33777
Q ss_pred cCCCceEEEEeCCCCcEEEEEc-CCceEEEEEEecCCcceeEEeecCCcccccceeEEEEEecCC-CeEEEEecCCc--E
Q psy12614 401 VNNATIRCSVVSNDGKYVAYST-ESCVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVLISADS-TLLLAVSLNGP--L 476 (708)
Q Consensus 401 ~~~~~i~~~~~s~~g~~l~~~~-d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~-~~l~~~~~dg~--i 476 (708)
+|...|.++....+|-+|++++ |+++++|.++.+... ...+....+|.+ .|.+++++..+ .++++++.|.. +
T Consensus 363 GH~e~vlSL~~~~~g~llat~sKD~svilWr~~~~~~~--~~~~a~~~gH~~--svgava~~~~~asffvsvS~D~tlK~ 438 (775)
T KOG0319|consen 363 GHTEAVLSLDVWSSGDLLATGSKDKSVILWRLNNNCSK--SLCVAQANGHTN--SVGAVAGSKLGASFFVSVSQDCTLKL 438 (775)
T ss_pred CchhheeeeeecccCcEEEEecCCceEEEEEecCCcch--hhhhhhhccccc--ccceeeecccCccEEEEecCCceEEE
Confidence 9999999999778888899865 999999999543322 222333567766 77889997655 68899999999 9
Q ss_pred EEecCCCeE----EEEEecCCCCCccCcceEEEEECCCCcEEEEEecCCeEEEEECC--ceeeecCCCCCCceEEEEcCC
Q psy12614 477 YIIDLSSLE----IKYCVDPYKSNLMSDVISLVQMSECKQYIVCADRKSHVVIWKNG--QHHASLPRYRKPSTAMAIHPT 550 (708)
Q Consensus 477 ~~~~~~~~~----~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~--~~~~~~~~~~~~v~~l~~s~d 550 (708)
|.+...... .+..-.....| ...|++++++|+.+++|||+.|.+.+||+++ ....++.+|...|.++.|+|.
T Consensus 439 W~l~~s~~~~~~~~~~~~~t~~aH--dKdIN~Vaia~ndkLiAT~SqDktaKiW~le~~~l~~vLsGH~RGvw~V~Fs~~ 516 (775)
T KOG0319|consen 439 WDLPKSKETAFPIVLTCRYTERAH--DKDINCVAIAPNDKLIATGSQDKTAKIWDLEQLRLLGVLSGHTRGVWCVSFSKN 516 (775)
T ss_pred ecCCCcccccccceehhhHHHHhh--cccccceEecCCCceEEecccccceeeecccCceEEEEeeCCccceEEEEeccc
Confidence 998752111 11111122345 8899999999999999999999999999999 344599999999999999999
Q ss_pred CCEEEEEecCCcEEEEEcCCCCCCchhhhhhccCchhhhcCCCCeeEEEeCCCCCceEEEEcCeeEEEEecCCCCCcccC
Q psy12614 551 LSTLVTVYSDHRIVEFDLNRKAFTTFSRKLETNHPNEWLSRQLPVLGIEFDPQDSSLIYLMDDSALCVINKNKSLAHADA 630 (708)
Q Consensus 551 ~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~~~~l~~~~~d~~i~~wd~~~~~~~~~~ 630 (708)
.+.||+++.|++|+||.+++..++ +++.||...|..+.|-.+|+.|++++.||-|++|++....+....
T Consensus 517 dq~laT~SgD~TvKIW~is~fSCl-----------kT~eGH~~aVlra~F~~~~~qliS~~adGliKlWnikt~eC~~tl 585 (775)
T KOG0319|consen 517 DQLLATCSGDKTVKIWSISTFSCL-----------KTFEGHTSAVLRASFIRNGKQLISAGADGLIKLWNIKTNECEMTL 585 (775)
T ss_pred cceeEeccCCceEEEEEeccceee-----------eeecCccceeEeeeeeeCCcEEEeccCCCcEEEEeccchhhhhhh
Confidence 999999999999999999999988 789999999999999999999999999999999999988876544
Q ss_pred c
Q psy12614 631 K 631 (708)
Q Consensus 631 ~ 631 (708)
.
T Consensus 586 D 586 (775)
T KOG0319|consen 586 D 586 (775)
T ss_pred h
Confidence 3
|
|
| >KOG0318|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-50 Score=372.06 Aligned_cols=520 Identities=17% Similarity=0.224 Sum_probs=415.9
Q ss_pred EEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECCCCe--EeE
Q psy12614 30 NCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMRRLN--IKS 105 (708)
Q Consensus 30 ~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~~--~~~ 105 (708)
.-+.-.|.|+.++... ...|.+-++++..... .+.+|. ..++-..|+ |.++++|...|.|+|||..... +..
T Consensus 22 ~~ig~dpkgd~ilY~n-Gksv~ir~i~~~~~~~-iYtEH~--~~vtVAkySPsG~yiASGD~sG~vRIWdtt~~~hiLKn 97 (603)
T KOG0318|consen 22 IIIGGDPKGDNILYTN-GKSVIIRNIDNPASVD-IYTEHA--HQVTVAKYSPSGFYIASGDVSGKVRIWDTTQKEHILKN 97 (603)
T ss_pred eEeccCCCCCeEEEeC-CCEEEEEECCCcccee-eecccc--ceeEEEEeCCCceEEeecCCcCcEEEEeccCcceeeee
Confidence 3455678888877754 4579999999887766 899998 999999999 9999999999999999987643 445
Q ss_pred EEeecCCceEEEEEecCCCEEEEEeCC----CcEEEEEccCCcEEEEEecccccccEEEEEECCCCC-EEEEecCC-eEE
Q psy12614 106 STAVTSGTCWCLSVHKKKRLLAAGTEQ----GHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGD-YLVTGCAA-AVR 179 (708)
Q Consensus 106 ~~~~~~~~v~~~~~s~~~~~la~~~~d----~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~-~l~~~~~d-~i~ 179 (708)
.++.-.++|..++|++|++++++.++. |.+.+|| +|.-. -.+.+|...|.++.|-|.-. ++++++.| .|.
T Consensus 98 ef~v~aG~I~Di~Wd~ds~RI~avGEGrerfg~~F~~D--SG~Sv--Gei~GhSr~ins~~~KpsRPfRi~T~sdDn~v~ 173 (603)
T KOG0318|consen 98 EFQVLAGPIKDISWDFDSKRIAAVGEGRERFGHVFLWD--SGNSV--GEITGHSRRINSVDFKPSRPFRIATGSDDNTVA 173 (603)
T ss_pred eeeecccccccceeCCCCcEEEEEecCccceeEEEEec--CCCcc--ceeeccceeEeeeeccCCCceEEEeccCCCeEE
Confidence 677888999999999999999887652 4455665 44444 67889999999999998765 68899999 999
Q ss_pred EEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCeeEEEee---ccccCeEEEEEeCC
Q psy12614 180 VWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDVK---THKKDILALTVSED 255 (708)
Q Consensus 180 iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~~---~~~~~i~~~~~s~~ 255 (708)
+|+-.--+....+. .|...|.|+.|+|||. +++.+.||.+.+||-.+|+.+..+. +|.+.|.+++|+||
T Consensus 174 ffeGPPFKFk~s~r-------~HskFV~~VRysPDG~~Fat~gsDgki~iyDGktge~vg~l~~~~aHkGsIfalsWsPD 246 (603)
T KOG0318|consen 174 FFEGPPFKFKSSFR-------EHSKFVNCVRYSPDGSRFATAGSDGKIYIYDGKTGEKVGELEDSDAHKGSIFALSWSPD 246 (603)
T ss_pred EeeCCCeeeeeccc-------ccccceeeEEECCCCCeEEEecCCccEEEEcCCCccEEEEecCCCCccccEEEEEECCC
Confidence 99844333333332 4488999999999995 9999999999999999999999987 89999999999999
Q ss_pred CCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccc---cceEEEEEeCCEEEEEcCCCeEEEEeCCCC
Q psy12614 256 ENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHE---GDVKSLALHGNRLYSGGLDSYLSLSYYPPK 332 (708)
Q Consensus 256 ~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~---~~v~~l~~~~~~l~s~~~d~~i~iw~~~~~ 332 (708)
++.+++++.|.+++|||..+ .+ ...++.... ..-..+.|..+.|++.+.+|.|.+++....
T Consensus 247 s~~~~T~SaDkt~KIWdVs~--------~s--------lv~t~~~~~~v~dqqvG~lWqkd~lItVSl~G~in~ln~~d~ 310 (603)
T KOG0318|consen 247 STQFLTVSADKTIKIWDVST--------NS--------LVSTWPMGSTVEDQQVGCLWQKDHLITVSLSGTINYLNPSDP 310 (603)
T ss_pred CceEEEecCCceEEEEEeec--------cc--------eEEEeecCCchhceEEEEEEeCCeEEEEEcCcEEEEecccCC
Confidence 99999999999999999998 43 333333222 233445566899999999999999999876
Q ss_pred c-eeecCccCCCCceEEEEcCCcEEEEE-cCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEE
Q psy12614 333 T-LVKYPCTLAQSTPVSLAKDIQHVLLQ-YTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSV 410 (708)
Q Consensus 333 ~-~~~~~~~~~~~~~~~~s~~~~~l~~~-~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 410 (708)
. +..+.++...+.+++.+++++++.++ .||.|.-|+...+. .-.-....|...|.+++
T Consensus 311 ~~~~~i~GHnK~ITaLtv~~d~~~i~SgsyDG~I~~W~~~~g~--------------------~~~~~g~~h~nqI~~~~ 370 (603)
T KOG0318|consen 311 SVLKVISGHNKSITALTVSPDGKTIYSGSYDGHINSWDSGSGT--------------------SDRLAGKGHTNQIKGMA 370 (603)
T ss_pred ChhheecccccceeEEEEcCCCCEEEeeccCceEEEEecCCcc--------------------ccccccccccceEEEEe
Confidence 6 55566788889999999999999985 99999999999876 11122246888999999
Q ss_pred eCCCCcEEEEEcCCceEEEEEEecCCcceeEEeecCCcccccceeEEEEEecCCCeEEEEecCCc-EEEecCCCeEEEEE
Q psy12614 411 VSNDGKYVAYSTESCVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVLISADSTLLLAVSLNGP-LYIIDLSSLEIKYC 489 (708)
Q Consensus 411 ~s~~g~~l~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~~~~~dg~-i~~~~~~~~~~~~~ 489 (708)
.+..+.++.+|.|.++++.++...... -...-++.. ...+++..+|+..+++++.++. ++.-. . .+..
T Consensus 371 ~~~~~~~~t~g~Dd~l~~~~~~~~~~t--~~~~~~lg~-----QP~~lav~~d~~~avv~~~~~iv~l~~~-~---~~~~ 439 (603)
T KOG0318|consen 371 ASESGELFTIGWDDTLRVISLKDNGYT--KSEVVKLGS-----QPKGLAVLSDGGTAVVACISDIVLLQDQ-T---KVSS 439 (603)
T ss_pred ecCCCcEEEEecCCeEEEEecccCccc--ccceeecCC-----CceeEEEcCCCCEEEEEecCcEEEEecC-C---ccee
Confidence 998888888899999999988652211 110000211 2224888899888887777776 33311 1 1122
Q ss_pred ecCCCCCccCcceEEEEECCCCcEEEEEecCCeEEEEECCc----eeeecCCCCCCceEEEEcCCCCEEEEEecCCcEEE
Q psy12614 490 VDPYKSNLMSDVISLVQMSECKQYIVCADRKSHVVIWKNGQ----HHASLPRYRKPSTAMAIHPTLSTLVTVYSDHRIVE 565 (708)
Q Consensus 490 ~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~----~~~~~~~~~~~v~~l~~s~d~~~l~~~~~dg~i~v 565 (708)
+.. .-...+++++|++..+|+|+.|+.|+||.+.. .+..+..|.++|+.++||||+.+||++...+.+.+
T Consensus 440 ~~~------~y~~s~vAv~~~~~~vaVGG~Dgkvhvysl~g~~l~ee~~~~~h~a~iT~vaySpd~~yla~~Da~rkvv~ 513 (603)
T KOG0318|consen 440 IPI------GYESSAVAVSPDGSEVAVGGQDGKVHVYSLSGDELKEEAKLLEHRAAITDVAYSPDGAYLAAGDASRKVVL 513 (603)
T ss_pred ecc------ccccceEEEcCCCCEEEEecccceEEEEEecCCcccceeeeecccCCceEEEECCCCcEEEEeccCCcEEE
Confidence 221 34678999999999999999999999999993 23377889999999999999999999999999999
Q ss_pred EEcCCCCCCchhhhhhccCchhhhcCCCCeeEEEeCCCCCceEEEEcCeeEEEEecCCCCCc
Q psy12614 566 FDLNRKAFTTFSRKLETNHPNEWLSRQLPVLGIEFDPQDSSLIYLMDDSALCVINKNKSLAH 627 (708)
Q Consensus 566 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~~~~l~~~~~d~~i~~wd~~~~~~~ 627 (708)
||+++.+.. ...|.-|..+|.+|+|+|+..++|+++-|.+|.||+++.|...
T Consensus 514 yd~~s~~~~----------~~~w~FHtakI~~~aWsP~n~~vATGSlDt~Viiysv~kP~~~ 565 (603)
T KOG0318|consen 514 YDVASREVK----------TNRWAFHTAKINCVAWSPNNKLVATGSLDTNVIIYSVKKPAKH 565 (603)
T ss_pred EEcccCcee----------cceeeeeeeeEEEEEeCCCceEEEeccccceEEEEEccChhhh
Confidence 999998754 2456679999999999999999999999999999999877644
|
|
| >KOG0306|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-52 Score=400.15 Aligned_cols=538 Identities=14% Similarity=0.178 Sum_probs=427.7
Q ss_pred CCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECCCCe
Q psy12614 25 EPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMRRLN 102 (708)
Q Consensus 25 h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~~ 102 (708)
-...|+|+.-+|+.-.||+|..||.|+||+..++..+. ++.||. ..|+.+.|. |.+|++|+.|+.|.+||+-...
T Consensus 64 ~k~evt~l~~~~d~l~lAVGYaDGsVqif~~~s~~~~~-tfngHK--~AVt~l~fd~~G~rlaSGskDt~IIvwDlV~E~ 140 (888)
T KOG0306|consen 64 KKAEVTCLRSSDDILLLAVGYADGSVQIFSLESEEILI-TFNGHK--AAVTTLKFDKIGTRLASGSKDTDIIVWDLVGEE 140 (888)
T ss_pred ccceEEEeeccCCcceEEEEecCceEEeeccCCCceee-eecccc--cceEEEEEcccCceEeecCCCccEEEEEeccce
Confidence 34689999999999999999999999999999886665 999999 999999999 9999999999999999999999
Q ss_pred EeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEE
Q psy12614 103 IKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVW 181 (708)
Q Consensus 103 ~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iw 181 (708)
-+..+.+|...|+.+-|..+.+++++.+.|+.|++||+++..+. .+.-.|.+.+..+++.+ +.+++++.| .+++|
T Consensus 141 Gl~rL~GHkd~iT~~~F~~~~~~lvS~sKDs~iK~WdL~tqhCf--~Thvd~r~Eiw~l~~~~--~~lvt~~~dse~~v~ 216 (888)
T KOG0306|consen 141 GLFRLRGHKDSITQALFLNGDSFLVSVSKDSMIKFWDLETQHCF--ETHVDHRGEIWALVLDE--KLLVTAGTDSELKVW 216 (888)
T ss_pred eeEEeecchHHHhHHhccCCCeEEEEeccCceEEEEecccceee--eEEecccceEEEEEEec--ceEEEEecCCceEEE
Confidence 99999999999999999998899999999999999999999987 66677899999999987 788888888 99999
Q ss_pred EcCCC-------ceE-----EEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCeeEE----------
Q psy12614 182 DIHKG-------HAI-----HKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWS---------- 238 (708)
Q Consensus 182 d~~~~-------~~~-----~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~---------- 238 (708)
++... ..+ .++... + .+..-.++..++++ +++-+.|..+.++.+.+.+.+.
T Consensus 217 ~L~~~~D~~~~~~~~s~~~~G~~~rq-----s-k~R~i~l~~d~s~r~~~c~g~d~~~e~frI~s~~E~~k~l~Kk~k~~ 290 (888)
T KOG0306|consen 217 ELAFEDDEKETNRYISTKLRGTFIRQ-----S-KGREINLVTDFSDRFLVCQGADKVIELFRIRSKEEIAKILSKKLKRA 290 (888)
T ss_pred Eeecccccccccccceeeccceeeec-----c-CCceeEEeecCcccEEEEecchhhhhheeecCHHHHHHHHHHHHHHh
Confidence 98311 111 111111 1 22233445555666 6677788888888875432110
Q ss_pred -------------------------EeeccccCeEEEEEeCCCC---EEEEEecCCeEEEEEccCCcccccCCCCCCCCc
Q psy12614 239 -------------------------DVKTHKKDILALTVSEDEN---YLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSS 290 (708)
Q Consensus 239 -------------------------~~~~~~~~i~~~~~s~~~~---~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~ 290 (708)
++. ....|.++.+.|.++ .|+. -.++.+..|.++.. ++....+
T Consensus 291 Kkka~t~e~~~~v~~sl~~~i~r~~~ir-~~~kiks~dv~~~~~~~~~lv~-l~nNtv~~ysl~~s-------~~~~p~~ 361 (888)
T KOG0306|consen 291 KKKAETEENEDDVEKSLSDEIKRLETIR-TSAKIKSFDVTPSGGTENTLVL-LANNTVEWYSLENS-------GKTSPEA 361 (888)
T ss_pred hhhccccccccchhhhHHHHHHHHHhee-chhheeEEEEEecCCcceeEEE-eecCceEEEEeccC-------CCCCccc
Confidence 001 234567777877652 3444 55778888887650 1100112
Q ss_pred ceEEeEEEeccccceEEEEEe-CCEEEEEcCCCeEEEEeCCCCc-eeecCccCCCCceEEEEcCCcEEEEE-cCCeEEEE
Q psy12614 291 VWVRSVNRVIHEGDVKSLALH-GNRLYSGGLDSYLSLSYYPPKT-LVKYPCTLAQSTPVSLAKDIQHVLLQ-YTSHLELW 367 (708)
Q Consensus 291 ~~~~~~~~~~~~~~v~~l~~~-~~~l~s~~~d~~i~iw~~~~~~-~~~~~~~~~~~~~~~~s~~~~~l~~~-~~~~i~i~ 367 (708)
.......+.+|...|++++++ .+.++..+..+.+++|+..+.. ++++. ....-+..|-|.+++++.+ ..|.+.+|
T Consensus 362 ~~~~~i~~~GHR~dVRsl~vS~d~~~~~Sga~~SikiWn~~t~kciRTi~--~~y~l~~~Fvpgd~~Iv~G~k~Gel~vf 439 (888)
T KOG0306|consen 362 DRTSNIEIGGHRSDVRSLCVSSDSILLASGAGESIKIWNRDTLKCIRTIT--CGYILASKFVPGDRYIVLGTKNGELQVF 439 (888)
T ss_pred cccceeeeccchhheeEEEeecCceeeeecCCCcEEEEEccCcceeEEec--cccEEEEEecCCCceEEEeccCCceEEE
Confidence 222346778999999999999 6666666778899999999665 66666 4477788899999999986 77899999
Q ss_pred EecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEEEc-CCceEEEEEEecCCcc-eeEEeec
Q psy12614 368 SLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYST-ESCVRLHSLDLDGDKP-QISRIKN 445 (708)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~-d~~i~i~~~~~~~~~~-~~~~~~~ 445 (708)
|+.+.. +.+....|.+.|++++.+||++.+++++ |.+|++|++....... .-+++-.
T Consensus 440 dlaS~~---------------------l~Eti~AHdgaIWsi~~~pD~~g~vT~saDktVkfWdf~l~~~~~gt~~k~ls 498 (888)
T KOG0306|consen 440 DLASAS---------------------LVETIRAHDGAIWSISLSPDNKGFVTGSADKTVKFWDFKLVVSVPGTQKKVLS 498 (888)
T ss_pred Eeehhh---------------------hhhhhhccccceeeeeecCCCCceEEecCCcEEEEEeEEEEeccCcccceeee
Confidence 999865 4555568999999999999999999955 9999999987522200 0000000
Q ss_pred CCc--ccc-cceeEEEEEecCCCeEEEEecCCc--EEEecCCCeEEEEEecCCCCCccCcceEEEEECCCCcEEEEEecC
Q psy12614 446 LPA--PLF-KSIFTHVLISADSTLLLAVSLNGP--LYIIDLSSLEIKYCVDPYKSNLMSDVISLVQMSECKQYIVCADRK 520 (708)
Q Consensus 446 ~~~--~~~-~~~i~~~~~s~d~~~l~~~~~dg~--i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d 520 (708)
+.. ... ...|.|+++||||++||++--|.+ ||-+++- +.+-..-|| .-+|.++..|||++.++||+.|
T Consensus 499 l~~~rtLel~ddvL~v~~Spdgk~LaVsLLdnTVkVyflDtl-----KFflsLYGH--kLPV~smDIS~DSklivTgSAD 571 (888)
T KOG0306|consen 499 LKHTRTLELEDDVLCVSVSPDGKLLAVSLLDNTVKVYFLDTL-----KFFLSLYGH--KLPVLSMDISPDSKLIVTGSAD 571 (888)
T ss_pred eccceEEeccccEEEEEEcCCCcEEEEEeccCeEEEEEecce-----eeeeeeccc--ccceeEEeccCCcCeEEeccCC
Confidence 111 111 457888999999999999999998 8888876 455556688 8999999999999999999999
Q ss_pred CeEEEEECCceee--ecCCCCCCceEEEEcCCCCEEEEEecCCcEEEEEcCCCCCCchhhhhhccCchhhhcCCCCeeEE
Q psy12614 521 SHVVIWKNGQHHA--SLPRYRKPSTAMAIHPTLSTLVTVYSDHRIVEFDLNRKAFTTFSRKLETNHPNEWLSRQLPVLGI 598 (708)
Q Consensus 521 ~~i~iw~~~~~~~--~~~~~~~~v~~l~~s~d~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l 598 (708)
.+|+||-++=+.| .+.+|+..|.++.|.|+...+.+++.|+.|+-||-+.-+.+ ..+.+|...|+++
T Consensus 572 KnVKiWGLdFGDCHKS~fAHdDSvm~V~F~P~~~~FFt~gKD~kvKqWDg~kFe~i-----------q~L~~H~~ev~cL 640 (888)
T KOG0306|consen 572 KNVKIWGLDFGDCHKSFFAHDDSVMSVQFLPKTHLFFTCGKDGKVKQWDGEKFEEI-----------QKLDGHHSEVWCL 640 (888)
T ss_pred CceEEeccccchhhhhhhcccCceeEEEEcccceeEEEecCcceEEeechhhhhhh-----------eeeccchheeeee
Confidence 9999999995555 89999999999999999999999999999999998877665 6788999999999
Q ss_pred EeCCCCCceEEEEcCeeEEEEecCCCC
Q psy12614 599 EFDPQDSSLIYLMDDSALCVINKNKSL 625 (708)
Q Consensus 599 ~~s~~~~~l~~~~~d~~i~~wd~~~~~ 625 (708)
+.+|+|.++++++.|.+|++|....+.
T Consensus 641 av~~~G~~vvs~shD~sIRlwE~tde~ 667 (888)
T KOG0306|consen 641 AVSPNGSFVVSSSHDKSIRLWERTDEI 667 (888)
T ss_pred EEcCCCCeEEeccCCceeEeeeccCcc
Confidence 999999999999999999999987644
|
|
| >KOG0291|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-49 Score=381.18 Aligned_cols=534 Identities=12% Similarity=0.162 Sum_probs=433.0
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECCCCeEeEEEe
Q psy12614 31 CIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMRRLNIKSSTA 108 (708)
Q Consensus 31 ~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~~~~~~~~ 108 (708)
.+.|++||.-+++-.. +.|.++|+.+++.....+. +. ..|.+++.+ |.+|++..+.|...+-++.....++.+.
T Consensus 19 nl~ft~dG~sviSPvG-Nrvsv~dLknN~S~Tl~~e-~~--~NI~~ialSp~g~lllavdE~g~~~lvs~~~r~Vlh~f~ 94 (893)
T KOG0291|consen 19 NLVFTKDGNSVISPVG-NRVSVFDLKNNKSYTLPLE-TR--YNITRIALSPDGTLLLAVDERGRALLVSLLSRSVLHRFN 94 (893)
T ss_pred cEEECCCCCEEEeccC-CEEEEEEccCCcceeEEee-cC--CceEEEEeCCCceEEEEEcCCCcEEEEecccceeeEEEe
Confidence 5789999999888654 5899999998776543333 33 789999999 8899999999999999998877777766
Q ss_pred ecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCc------EEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEE
Q psy12614 109 VTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEG------LLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVW 181 (708)
Q Consensus 109 ~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~------~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iw 181 (708)
. ...|.|+.|||||+++|++.. +.+.||...... .+..+.+.+|-..|.++.|+.|.++|++++.| .+++|
T Consensus 95 f-k~~v~~i~fSPng~~fav~~g-n~lqiw~~P~~~~~~~~pFvl~r~~~g~fddi~si~Ws~DSr~l~~gsrD~s~rl~ 172 (893)
T KOG0291|consen 95 F-KRGVGAIKFSPNGKFFAVGCG-NLLQIWHAPGEIKNEFNPFVLHRTYLGHFDDITSIDWSDDSRLLVTGSRDLSARLF 172 (893)
T ss_pred e-cCccceEEECCCCcEEEEEec-ceeEEEecCcchhcccCcceEeeeecCCccceeEEEeccCCceEEeccccceEEEE
Confidence 4 468999999999999998764 679999875432 23346778899999999999999999999999 99999
Q ss_pred EcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCC-----------------------Cee-
Q psy12614 182 DIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKT-----------------------GVQ- 236 (708)
Q Consensus 182 d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~-----------------------~~~- 236 (708)
+++..+........ +|...|.+..|..+.. +++.+.||.+.+|.... ++.
T Consensus 173 ~v~~~k~~~~~~l~-----gHkd~VvacfF~~~~~~l~tvskdG~l~~W~~~~~P~~~~~~~kd~eg~~d~~~~~~~Eek 247 (893)
T KOG0291|consen 173 GVDGNKNLFTYALN-----GHKDYVVACFFGANSLDLYTVSKDGALFVWTCDLRPPELDKAEKDEEGSDDEEMDEDGEEK 247 (893)
T ss_pred EeccccccceEecc-----CCCcceEEEEeccCcceEEEEecCceEEEEEecCCCcccccccccccccccccccccchhh
Confidence 99887775555554 6699999999999884 99999999999998751 111
Q ss_pred ----E-E-----EeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceE
Q psy12614 237 ----W-S-----DVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVK 306 (708)
Q Consensus 237 ----~-~-----~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~ 306 (708)
. . -+......+++.+|++..+.|++|-..|...+|.+.. -. .++.+.-...+|.
T Consensus 248 ~~~~~~~k~~k~~ln~~~~kvtaa~fH~~t~~lvvgFssG~f~LyelP~--------f~--------lih~LSis~~~I~ 311 (893)
T KOG0291|consen 248 THKIFWYKTKKHYLNQNSSKVTAAAFHKGTNLLVVGFSSGEFGLYELPD--------FN--------LIHSLSISDQKIL 311 (893)
T ss_pred hcceEEEEEEeeeecccccceeeeeccCCceEEEEEecCCeeEEEecCC--------ce--------EEEEeecccceee
Confidence 0 0 1122337899999999999999999999999999987 33 6777877788999
Q ss_pred EEEEe--CCEEEEEcCC-CeEEEEeCCCCc-eeecCccCCCCceEEEEcCCcEEEEE-cCCeEEEEEecCCCCCCCCCCC
Q psy12614 307 SLALH--GNRLYSGGLD-SYLSLSYYPPKT-LVKYPCTLAQSTPVSLAKDIQHVLLQ-YTSHLELWSLGSAQSTDLSSHS 381 (708)
Q Consensus 307 ~l~~~--~~~l~s~~~d-~~i~iw~~~~~~-~~~~~~~~~~~~~~~~s~~~~~l~~~-~~~~i~i~~~~~~~~~~~~~~~ 381 (708)
.++|+ |++|+.|+.. |.+.+|+..... +.+..++.....++++||||++++++ .|+.|++||...+.
T Consensus 312 t~~~N~tGDWiA~g~~klgQLlVweWqsEsYVlKQQgH~~~i~~l~YSpDgq~iaTG~eDgKVKvWn~~Sgf-------- 383 (893)
T KOG0291|consen 312 TVSFNSTGDWIAFGCSKLGQLLVWEWQSESYVLKQQGHSDRITSLAYSPDGQLIATGAEDGKVKVWNTQSGF-------- 383 (893)
T ss_pred EEEecccCCEEEEcCCccceEEEEEeeccceeeeccccccceeeEEECCCCcEEEeccCCCcEEEEeccCce--------
Confidence 99999 9999998765 899999998876 55566688899999999999999995 88999999999865
Q ss_pred CCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEEEc-CCceEEEEEEecCCcceeEEeecCCcccccceeEEEEE
Q psy12614 382 NTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYST-ESCVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVLI 460 (708)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~-d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 460 (708)
+...+..|.+.|+.+.|+..|+.++++. ||+|+.||+.... .++. +.... .....|++.
T Consensus 384 -------------C~vTFteHts~Vt~v~f~~~g~~llssSLDGtVRAwDlkRYr---NfRT---ft~P~-p~Qfscvav 443 (893)
T KOG0291|consen 384 -------------CFVTFTEHTSGVTAVQFTARGNVLLSSSLDGTVRAWDLKRYR---NFRT---FTSPE-PIQFSCVAV 443 (893)
T ss_pred -------------EEEEeccCCCceEEEEEEecCCEEEEeecCCeEEeeeecccc---eeee---ecCCC-ceeeeEEEE
Confidence 6677789999999999999999999866 9999999998633 3333 22222 335567899
Q ss_pred ecCCCeEEEEecCCc---EEEecCCCeEEEEEecCCCCCccCcceEEEEECCCCcEEEEEecCCeEEEEECCc--eeeec
Q psy12614 461 SADSTLLLAVSLNGP---LYIIDLSSLEIKYCVDPYKSNLMSDVISLVQMSECKQYIVCADRKSHVVIWKNGQ--HHASL 535 (708)
Q Consensus 461 s~d~~~l~~~~~dg~---i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~--~~~~~ 535 (708)
.|.|..+.+|+.|.. +|.+.++ +.+....|| +++|.+++|+|++..||+++.|.+|++||+-. ....-
T Consensus 444 D~sGelV~AG~~d~F~IfvWS~qTG-----qllDiLsGH--EgPVs~l~f~~~~~~LaS~SWDkTVRiW~if~s~~~vEt 516 (893)
T KOG0291|consen 444 DPSGELVCAGAQDSFEIFVWSVQTG-----QLLDILSGH--EGPVSGLSFSPDGSLLASGSWDKTVRIWDIFSSSGTVET 516 (893)
T ss_pred cCCCCEEEeeccceEEEEEEEeecC-----eeeehhcCC--CCcceeeEEccccCeEEeccccceEEEEEeeccCceeee
Confidence 999999999999887 8888888 556666788 99999999999999999999999999999983 34444
Q ss_pred CCCCCCceEEEEcCCCCEEEEEecCCcEEEEEcCCCCCCc---------hhhhhhccCchhhhcCCCCeeEEEeCCCCCc
Q psy12614 536 PRYRKPSTAMAIHPTLSTLVTVYSDHRIVEFDLNRKAFTT---------FSRKLETNHPNEWLSRQLPVLGIEFDPQDSS 606 (708)
Q Consensus 536 ~~~~~~v~~l~~s~d~~~l~~~~~dg~i~vwd~~~~~~~~---------~~~~~~~~~~~~~~~~~~~i~~l~~s~~~~~ 606 (708)
-.+...+..++|+|||+.||+++.||.|.+||.+.+.... -.|.......+.-.......+.+++|+||.+
T Consensus 517 l~i~sdvl~vsfrPdG~elaVaTldgqItf~d~~~~~q~~~IdgrkD~~~gR~~~D~~ta~~sa~~K~Ftti~ySaDG~~ 596 (893)
T KOG0291|consen 517 LEIRSDVLAVSFRPDGKELAVATLDGQITFFDIKEAVQVGSIDGRKDLSGGRKETDRITAENSAKGKTFTTICYSADGKC 596 (893)
T ss_pred EeeccceeEEEEcCCCCeEEEEEecceEEEEEhhhceeeccccchhhccccccccceeehhhcccCCceEEEEEcCCCCE
Confidence 4567889999999999999999999999999987554321 0111111123333344568999999999999
Q ss_pred eEEEEcCeeEEEEecCCCCC
Q psy12614 607 LIYLMDDSALCVINKNKSLA 626 (708)
Q Consensus 607 l~~~~~d~~i~~wd~~~~~~ 626 (708)
|++|+....|++|++....-
T Consensus 597 IlAgG~sn~iCiY~v~~~vl 616 (893)
T KOG0291|consen 597 ILAGGESNSICIYDVPEGVL 616 (893)
T ss_pred EEecCCcccEEEEECchhhe
Confidence 99999999999999976554
|
|
| >KOG0291|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-49 Score=382.29 Aligned_cols=530 Identities=15% Similarity=0.216 Sum_probs=408.0
Q ss_pred CCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCC-------eEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEE
Q psy12614 26 PKVINCIACEPKSSRLAVSRADQSIEIWDISETP-------HVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEY 96 (708)
Q Consensus 26 ~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~-------~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vw 96 (708)
..+|.|+.|||||+++|+|..+ .+.||...... .+.+++.||. ..|.++.|+ .++|++|+.|-++++|
T Consensus 96 k~~v~~i~fSPng~~fav~~gn-~lqiw~~P~~~~~~~~pFvl~r~~~g~f--ddi~si~Ws~DSr~l~~gsrD~s~rl~ 172 (893)
T KOG0291|consen 96 KRGVGAIKFSPNGKFFAVGCGN-LLQIWHAPGEIKNEFNPFVLHRTYLGHF--DDITSIDWSDDSRLLVTGSRDLSARLF 172 (893)
T ss_pred cCccceEEECCCCcEEEEEecc-eeEEEecCcchhcccCcceEeeeecCCc--cceeEEEeccCCceEEeccccceEEEE
Confidence 5789999999999999999754 89999987532 2456888999 999999999 8889999999999999
Q ss_pred ECCCCeE--eEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccC------------------------Cc----EE
Q psy12614 97 DMRRLNI--KSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISD------------------------EG----LL 146 (708)
Q Consensus 97 d~~~~~~--~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~------------------------~~----~~ 146 (708)
+++..+- ...+.+|...|-++-|..+...+.+.+.||.+.+|.... .+ ..
T Consensus 173 ~v~~~k~~~~~~l~gHkd~VvacfF~~~~~~l~tvskdG~l~~W~~~~~P~~~~~~~kd~eg~~d~~~~~~~Eek~~~~~ 252 (893)
T KOG0291|consen 173 GVDGNKNLFTYALNGHKDYVVACFFGANSLDLYTVSKDGALFVWTCDLRPPELDKAEKDEEGSDDEEMDEDGEEKTHKIF 252 (893)
T ss_pred EeccccccceEeccCCCcceEEEEeccCcceEEEEecCceEEEEEecCCCcccccccccccccccccccccchhhhcceE
Confidence 9988765 566789999999999999999999999999999998871 11 01
Q ss_pred E----EEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEE
Q psy12614 147 Y----EKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITG 220 (708)
Q Consensus 147 ~----~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~ 220 (708)
+ ..-+......|++.+|++..+.|+++-.. ...++.+.....++.+... ...|..++|+..|. ++.|
T Consensus 253 ~~k~~k~~ln~~~~kvtaa~fH~~t~~lvvgFssG~f~LyelP~f~lih~LSis-------~~~I~t~~~N~tGDWiA~g 325 (893)
T KOG0291|consen 253 WYKTKKHYLNQNSSKVTAAAFHKGTNLLVVGFSSGEFGLYELPDFNLIHSLSIS-------DQKILTVSFNSTGDWIAFG 325 (893)
T ss_pred EEEEEeeeecccccceeeeeccCCceEEEEEecCCeeEEEecCCceEEEEeecc-------cceeeEEEecccCCEEEEc
Confidence 1 11223334789999999999999999888 8889999999999999877 78899999999886 6655
Q ss_pred cC-CCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEe
Q psy12614 221 DS-GGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRV 299 (708)
Q Consensus 221 ~~-dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 299 (708)
+. -|++.+|++++...+...++|...+.+++++|||+++++|+.||.|++||... |- +..++.
T Consensus 326 ~~klgQLlVweWqsEsYVlKQQgH~~~i~~l~YSpDgq~iaTG~eDgKVKvWn~~S--------gf--------C~vTFt 389 (893)
T KOG0291|consen 326 CSKLGQLLVWEWQSESYVLKQQGHSDRITSLAYSPDGQLIATGAEDGKVKVWNTQS--------GF--------CFVTFT 389 (893)
T ss_pred CCccceEEEEEeeccceeeeccccccceeeEEECCCCcEEEeccCCCcEEEEeccC--------ce--------EEEEec
Confidence 55 48999999999999999999999999999999999999999999999999998 75 889999
Q ss_pred ccccceEEEEEe--CCEEEEEcCCCeEEEEeCCCCc-eeecCccCC-CCceEEEEcCCcEEEEEcC--CeEEEEEecCCC
Q psy12614 300 IHEGDVKSLALH--GNRLYSGGLDSYLSLSYYPPKT-LVKYPCTLA-QSTPVSLAKDIQHVLLQYT--SHLELWSLGSAQ 373 (708)
Q Consensus 300 ~~~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~~~-~~~~~~~~~-~~~~~~~s~~~~~l~~~~~--~~i~i~~~~~~~ 373 (708)
.|+..|+++.|. ++.+++.+.||+|+.||+.... .+++..|.+ +-.+++..|.|.++.++.- -.|.+|+.++++
T Consensus 390 eHts~Vt~v~f~~~g~~llssSLDGtVRAwDlkRYrNfRTft~P~p~QfscvavD~sGelV~AG~~d~F~IfvWS~qTGq 469 (893)
T KOG0291|consen 390 EHTSGVTAVQFTARGNVLLSSSLDGTVRAWDLKRYRNFRTFTSPEPIQFSCVAVDPSGELVCAGAQDSFEIFVWSVQTGQ 469 (893)
T ss_pred cCCCceEEEEEEecCCEEEEeecCCeEEeeeecccceeeeecCCCceeeeEEEEcCCCCEEEeeccceEEEEEEEeecCe
Confidence 999999999999 9999999999999999998765 666665554 4468899999999998733 359999999876
Q ss_pred CCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEEEc-CCceEEEEEEecCCcceeEEeecCCccccc
Q psy12614 374 STDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYST-ESCVRLHSLDLDGDKPQISRIKNLPAPLFK 452 (708)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~-d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~ 452 (708)
++.+..+|.++|.+++|+|+|..||+++ |.+|++|++-...+. ..+ ++- .
T Consensus 470 ---------------------llDiLsGHEgPVs~l~f~~~~~~LaS~SWDkTVRiW~if~s~~~--vEt---l~i---~ 520 (893)
T KOG0291|consen 470 ---------------------LLDILSGHEGPVSGLSFSPDGSLLASGSWDKTVRIWDIFSSSGT--VET---LEI---R 520 (893)
T ss_pred ---------------------eeehhcCCCCcceeeEEccccCeEEeccccceEEEEEeeccCce--eee---Eee---c
Confidence 7888899999999999999999999966 999999999863322 332 221 2
Q ss_pred ceeEEEEEecCCCeEEEEecCCc--EEEecCCCeEEEEEecCCC---------------CCccCcceEEEEECCCCcEEE
Q psy12614 453 SIFTHVLISADSTLLLAVSLNGP--LYIIDLSSLEIKYCVDPYK---------------SNLMSDVISLVQMSECKQYIV 515 (708)
Q Consensus 453 ~~i~~~~~s~d~~~l~~~~~dg~--i~~~~~~~~~~~~~~~~~~---------------~~~~~~~i~~~~~s~~~~~l~ 515 (708)
..++.++|+|||+.||+++.||. +|+.... ..+..+...+ ........+.+++|+||.+++
T Consensus 521 sdvl~vsfrPdG~elaVaTldgqItf~d~~~~--~q~~~IdgrkD~~~gR~~~D~~ta~~sa~~K~Ftti~ySaDG~~Il 598 (893)
T KOG0291|consen 521 SDVLAVSFRPDGKELAVATLDGQITFFDIKEA--VQVGSIDGRKDLSGGRKETDRITAENSAKGKTFTTICYSADGKCIL 598 (893)
T ss_pred cceeEEEEcCCCCeEEEEEecceEEEEEhhhc--eeeccccchhhccccccccceeehhhcccCCceEEEEEcCCCCEEE
Confidence 35666999999999999999999 8887654 3332221110 001145789999999999999
Q ss_pred EEecCCeEEEEECCceee--ec--------CCCCCCceEEEEcCCCCEEEEEecCCcEEEEEcCCCCCCc-hhhhhhc--
Q psy12614 516 CADRKSHVVIWKNGQHHA--SL--------PRYRKPSTAMAIHPTLSTLVTVYSDHRIVEFDLNRKAFTT-FSRKLET-- 582 (708)
Q Consensus 516 ~~~~d~~i~iw~~~~~~~--~~--------~~~~~~v~~l~~s~d~~~l~~~~~dg~i~vwd~~~~~~~~-~~~~~~~-- 582 (708)
+|+..+.|.+|++.+... .+ .+.......=.+.+- |.+.+-|-+...... ....++.
T Consensus 599 AgG~sn~iCiY~v~~~vllkkfqiS~N~sLdg~~efln~rkmtEf----------G~~~LiD~e~~~~e~~i~~~lpG~~ 668 (893)
T KOG0291|consen 599 AGGESNSICIYDVPEGVLLKKFQISDNRSLDGVLEFLNRRKMTEF----------GNMDLIDTEESDLEGRIDIALPGVQ 668 (893)
T ss_pred ecCCcccEEEEECchhheeeeEEeccccchhHHHHHhcccccccc----------CCccccccccccccccccccCCccc
Confidence 999999999999993321 11 111111111122222 223333321111100 0000000
Q ss_pred --cCchhhhcCCCCeeEEEeCCCCCceEEEEcCeeEEEEecCC
Q psy12614 583 --NHPNEWLSRQLPVLGIEFDPQDSSLIYLMDDSALCVINKNK 623 (708)
Q Consensus 583 --~~~~~~~~~~~~i~~l~~s~~~~~l~~~~~d~~i~~wd~~~ 623 (708)
.+..+-....-.|.++.|+|.|+.++.++..| +.||.++.
T Consensus 669 ~gdlssRr~rpeIrv~sv~fsPtgraFAaatTEG-l~IYsld~ 710 (893)
T KOG0291|consen 669 RGDLSSRRFRPEIRVTSVQFSPTGRAFAAATTEG-LLIYSLDT 710 (893)
T ss_pred cCCccccccCceEEEEEEEECCCcCeeeeecccc-eEEEecCC
Confidence 00111001122688999999999999999887 77787753
|
|
| >KOG0271|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-51 Score=364.00 Aligned_cols=321 Identities=19% Similarity=0.286 Sum_probs=287.6
Q ss_pred eeccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEE
Q psy12614 20 KFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYD 97 (708)
Q Consensus 20 ~~~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd 97 (708)
..+.||.++|.|++|+|+|+.||+|+.|.++++||+.+..... +..+|. ..|.|++|+ |+.||+|+.||+|++||
T Consensus 109 sS~~GH~e~Vl~~~fsp~g~~l~tGsGD~TvR~WD~~TeTp~~-t~KgH~--~WVlcvawsPDgk~iASG~~dg~I~lwd 185 (480)
T KOG0271|consen 109 SSIAGHGEAVLSVQFSPTGSRLVTGSGDTTVRLWDLDTETPLF-TCKGHK--NWVLCVAWSPDGKKIASGSKDGSIRLWD 185 (480)
T ss_pred cccCCCCCcEEEEEecCCCceEEecCCCceEEeeccCCCCcce-eecCCc--cEEEEEEECCCcchhhccccCCeEEEec
Confidence 4589999999999999999999999999999999999988876 999999 999999999 99999999999999999
Q ss_pred CCCCeEe-EEEeecCCceEEEEEec-----CCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEE
Q psy12614 98 MRRLNIK-SSTAVTSGTCWCLSVHK-----KKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLV 171 (708)
Q Consensus 98 ~~~~~~~-~~~~~~~~~v~~~~~s~-----~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~ 171 (708)
.++|+++ ..+.+|...|++++|.| ..++||+++.||.|+|||+..+..+ ..+.+|..+|+|+.|--+| +|+
T Consensus 186 pktg~~~g~~l~gH~K~It~Lawep~hl~p~~r~las~skDg~vrIWd~~~~~~~--~~lsgHT~~VTCvrwGG~g-liy 262 (480)
T KOG0271|consen 186 PKTGQQIGRALRGHKKWITALAWEPLHLVPPCRRLASSSKDGSVRIWDTKLGTCV--RTLSGHTASVTCVRWGGEG-LIY 262 (480)
T ss_pred CCCCCcccccccCcccceeEEeecccccCCCccceecccCCCCEEEEEccCceEE--EEeccCccceEEEEEcCCc-eEE
Confidence 9998765 67899999999999976 5679999999999999999999887 7899999999999998666 899
Q ss_pred EecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccC------------------------------------
Q psy12614 172 TGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCAD------------------------------------ 214 (708)
Q Consensus 172 ~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~------------------------------------ 214 (708)
+++.| +|++|+...|.+.+.++ +|...|+.++.+.|
T Consensus 263 SgS~DrtIkvw~a~dG~~~r~lk-------GHahwvN~lalsTdy~LRtgaf~~t~~~~~~~se~~~~Al~rY~~~~~~~ 335 (480)
T KOG0271|consen 263 SGSQDRTIKVWRALDGKLCRELK-------GHAHWVNHLALSTDYVLRTGAFDHTGRKPKSFSEEQKKALERYEAVLKDS 335 (480)
T ss_pred ecCCCceEEEEEccchhHHHhhc-------ccchheeeeeccchhhhhccccccccccCCChHHHHHHHHHHHHHhhccC
Confidence 99999 99999999999988887 44788888877611
Q ss_pred C-EEEEEcCCCcEEEEeCCCC-eeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcce
Q psy12614 215 F-TIITGDSGGFVRFWDGKTG-VQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVW 292 (708)
Q Consensus 215 ~-~l~~~~~dg~i~~wd~~~~-~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~ 292 (708)
+ ++++|+.|.++.+|+.... +++..+.+|..-|..+.||||++++++++.|..|++|+..+ |+
T Consensus 336 ~erlVSgsDd~tlflW~p~~~kkpi~rmtgHq~lVn~V~fSPd~r~IASaSFDkSVkLW~g~t--------Gk------- 400 (480)
T KOG0271|consen 336 GERLVSGSDDFTLFLWNPFKSKKPITRMTGHQALVNHVSFSPDGRYIASASFDKSVKLWDGRT--------GK------- 400 (480)
T ss_pred cceeEEecCCceEEEecccccccchhhhhchhhheeeEEECCCccEEEEeecccceeeeeCCC--------cc-------
Confidence 1 4899999999999997654 47888999999999999999999999999999999999999 98
Q ss_pred EEeEEEeccccceEEEEEe--CCEEEEEcCCCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEEEcCCeEEEEEec
Q psy12614 293 VRSVNRVIHEGDVKSLALH--GNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSLG 370 (708)
Q Consensus 293 ~~~~~~~~~~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~ 370 (708)
.+..+++|-+.|..++|+ .++|++|+.|.++++|++.++.+.
T Consensus 401 -~lasfRGHv~~VYqvawsaDsRLlVS~SkDsTLKvw~V~tkKl~----------------------------------- 444 (480)
T KOG0271|consen 401 -FLASFRGHVAAVYQVAWSADSRLLVSGSKDSTLKVWDVRTKKLK----------------------------------- 444 (480)
T ss_pred -hhhhhhhccceeEEEEeccCccEEEEcCCCceEEEEEeeeeeec-----------------------------------
Confidence 788999999999999999 679999999999999999766422
Q ss_pred CCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEEEc-CCceEEEE
Q psy12614 371 SAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYST-ESCVRLHS 430 (708)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~-d~~i~i~~ 430 (708)
.-..+|.++|.++.|+|||+.+++|. |..+++|.
T Consensus 445 --------------------------~DLpGh~DEVf~vDwspDG~rV~sggkdkv~~lw~ 479 (480)
T KOG0271|consen 445 --------------------------QDLPGHADEVFAVDWSPDGQRVASGGKDKVLRLWR 479 (480)
T ss_pred --------------------------ccCCCCCceEEEEEecCCCceeecCCCceEEEeec
Confidence 22236788899999999999999854 88888884
|
|
| >KOG0271|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-51 Score=365.19 Aligned_cols=361 Identities=17% Similarity=0.254 Sum_probs=297.0
Q ss_pred eEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEE
Q psy12614 102 NIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRV 180 (708)
Q Consensus 102 ~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~i 180 (708)
++-..+.+|.++|.|++|+|+|..||+|+.|.++++||+.+.... .+.++|..+|.|++|+|||+.||+|+.| +|++
T Consensus 106 rCssS~~GH~e~Vl~~~fsp~g~~l~tGsGD~TvR~WD~~TeTp~--~t~KgH~~WVlcvawsPDgk~iASG~~dg~I~l 183 (480)
T KOG0271|consen 106 RCSSSIAGHGEAVLSVQFSPTGSRLVTGSGDTTVRLWDLDTETPL--FTCKGHKNWVLCVAWSPDGKKIASGSKDGSIRL 183 (480)
T ss_pred eeccccCCCCCcEEEEEecCCCceEEecCCCceEEeeccCCCCcc--eeecCCccEEEEEEECCCcchhhccccCCeEEE
Confidence 456678899999999999999999999999999999999998887 7899999999999999999999999999 9999
Q ss_pred EEcCCCceEEEEEecccCCCCCceeEEEEEEcc-----CC-EEEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeC
Q psy12614 181 WDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCA-----DF-TIITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSE 254 (708)
Q Consensus 181 wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-----~~-~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~ 254 (708)
||..+|+++..-.. +|...|++++|.| .. ++++++.||.++|||+..++++..+.+|..+|+|+.|-.
T Consensus 184 wdpktg~~~g~~l~------gH~K~It~Lawep~hl~p~~r~las~skDg~vrIWd~~~~~~~~~lsgHT~~VTCvrwGG 257 (480)
T KOG0271|consen 184 WDPKTGQQIGRALR------GHKKWITALAWEPLHLVPPCRRLASSSKDGSVRIWDTKLGTCVRTLSGHTASVTCVRWGG 257 (480)
T ss_pred ecCCCCCccccccc------CcccceeEEeecccccCCCccceecccCCCCEEEEEccCceEEEEeccCccceEEEEEcC
Confidence 99999998766554 4589999999987 33 499999999999999999999999999999999999987
Q ss_pred CCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe-CCEEEEEcCCCeEEEEeCCCCc
Q psy12614 255 DENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH-GNRLYSGGLDSYLSLSYYPPKT 333 (708)
Q Consensus 255 ~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~-~~~l~s~~~d~~i~iw~~~~~~ 333 (708)
+| +|++|+.|++|++|+... |. ....+.+|.+.|+.++.+ .-.|-+|..|.+=+-....+
T Consensus 258 ~g-liySgS~DrtIkvw~a~d--------G~--------~~r~lkGHahwvN~lalsTdy~LRtgaf~~t~~~~~~~s-- 318 (480)
T KOG0271|consen 258 EG-LIYSGSQDRTIKVWRALD--------GK--------LCRELKGHAHWVNHLALSTDYVLRTGAFDHTGRKPKSFS-- 318 (480)
T ss_pred Cc-eEEecCCCceEEEEEccc--------hh--------HHHhhcccchheeeeeccchhhhhccccccccccCCChH--
Confidence 76 999999999999999998 86 788899999999999988 43344444332211000000
Q ss_pred eeecCccCCCCceEEEEcCCcEEEEEcCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCC
Q psy12614 334 LVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSN 413 (708)
Q Consensus 334 ~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~ 413 (708)
+.. ...+ .+. ....-.
T Consensus 319 ----------------------------------e~~---------------------~~Al--------~rY-~~~~~~ 334 (480)
T KOG0271|consen 319 ----------------------------------EEQ---------------------KKAL--------ERY-EAVLKD 334 (480)
T ss_pred ----------------------------------HHH---------------------HHHH--------HHH-HHhhcc
Confidence 000 0000 000 011122
Q ss_pred CCcEEEEE-cCCceEEEEEEecCCcceeEEeecCCcccccceeEEEEEecCCCeEEEEecCCc--EEEecCCCeEEEEEe
Q psy12614 414 DGKYVAYS-TESCVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVLISADSTLLLAVSLNGP--LYIIDLSSLEIKYCV 490 (708)
Q Consensus 414 ~g~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~~~~~dg~--i~~~~~~~~~~~~~~ 490 (708)
.+..|++| +|.++.+|+-... ...+ .++.+|.. -|.++.||||++++|+++.|.. +|+-.++ +.+
T Consensus 335 ~~erlVSgsDd~tlflW~p~~~--kkpi---~rmtgHq~--lVn~V~fSPd~r~IASaSFDkSVkLW~g~tG-----k~l 402 (480)
T KOG0271|consen 335 SGERLVSGSDDFTLFLWNPFKS--KKPI---TRMTGHQA--LVNHVSFSPDGRYIASASFDKSVKLWDGRTG-----KFL 402 (480)
T ss_pred CcceeEEecCCceEEEeccccc--ccch---hhhhchhh--heeeEEECCCccEEEEeecccceeeeeCCCc-----chh
Confidence 34677775 5999999987652 2123 33788876 6777999999999999999999 9998888 455
Q ss_pred cCCCCCccCcceEEEEECCCCcEEEEEecCCeEEEEECC--ceeeecCCCCCCceEEEEcCCCCEEEEEecCCcEEEEE
Q psy12614 491 DPYKSNLMSDVISLVQMSECKQYIVCADRKSHVVIWKNG--QHHASLPRYRKPSTAMAIHPTLSTLVTVYSDHRIVEFD 567 (708)
Q Consensus 491 ~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~--~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~dg~i~vwd 567 (708)
...+|| -..|..++||.|.++|++|+.|.++++|++. +....+++|..+|.++.|+|||+.+++|+.|..+++|.
T Consensus 403 asfRGH--v~~VYqvawsaDsRLlVS~SkDsTLKvw~V~tkKl~~DLpGh~DEVf~vDwspDG~rV~sggkdkv~~lw~ 479 (480)
T KOG0271|consen 403 ASFRGH--VAAVYQVAWSADSRLLVSGSKDSTLKVWDVRTKKLKQDLPGHADEVFAVDWSPDGQRVASGGKDKVLRLWR 479 (480)
T ss_pred hhhhhc--cceeEEEEeccCccEEEEcCCCceEEEEEeeeeeecccCCCCCceEEEEEecCCCceeecCCCceEEEeec
Confidence 666788 9999999999999999999999999999999 44559999999999999999999999999999999994
|
|
| >KOG0306|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-46 Score=364.55 Aligned_cols=550 Identities=15% Similarity=0.204 Sum_probs=418.7
Q ss_pred CCCCcEEEEEEc-CCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECCC
Q psy12614 24 PEPKVINCIACE-PKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMRR 100 (708)
Q Consensus 24 ~h~~~v~~~~~s-~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~ 100 (708)
...+.+..+..+ ..|+++|+.. .-.|.+||+.+++.....+.-.. ...|+++.-+ ...||+|..||.|++|+..+
T Consensus 19 S~~aN~~~~~~~~~~Gr~va~~a-~E~vn~WdlRtge~~~~l~~~~~-k~evt~l~~~~d~l~lAVGYaDGsVqif~~~s 96 (888)
T KOG0306|consen 19 SEVANINFVVKRSGKGRAVAVSA-LEQVNIWDLRTGEIEKKLILLKK-KAEVTCLRSSDDILLLAVGYADGSVQIFSLES 96 (888)
T ss_pred cCccceeEEEeecCCCcEEEEec-cccEeEEeeecchhhhhhhhhcc-cceEEEeeccCCcceEEEEecCceEEeeccCC
Confidence 334555555554 3588877732 33699999999965543333222 2589999887 55679999999999999999
Q ss_pred CeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEE
Q psy12614 101 LNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVR 179 (708)
Q Consensus 101 ~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~ 179 (708)
+....++.+|...|+++.|+..|..||+|+.|+.|.+||+-...-. ..+.+|...|+..-|..+.++|++.+.| .|+
T Consensus 97 ~~~~~tfngHK~AVt~l~fd~~G~rlaSGskDt~IIvwDlV~E~Gl--~rL~GHkd~iT~~~F~~~~~~lvS~sKDs~iK 174 (888)
T KOG0306|consen 97 EEILITFNGHKAAVTTLKFDKIGTRLASGSKDTDIIVWDLVGEEGL--FRLRGHKDSITQALFLNGDSFLVSVSKDSMIK 174 (888)
T ss_pred CceeeeecccccceEEEEEcccCceEeecCCCccEEEEEeccceee--EEeecchHHHhHHhccCCCeEEEEeccCceEE
Confidence 9999999999999999999999999999999999999999877665 6899999999999999989999999999 999
Q ss_pred EEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEEEEcCCCcEEEEeCCCC-------ee-----EEE-eeccccC
Q psy12614 180 VWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTG-------VQ-----WSD-VKTHKKD 246 (708)
Q Consensus 180 iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~wd~~~~-------~~-----~~~-~~~~~~~ 246 (708)
+||+++..+..+...+ ...++.+++.+ ..+++++.|+.+.+|++... .. ..+ .....+.
T Consensus 175 ~WdL~tqhCf~Thvd~-------r~Eiw~l~~~~-~~lvt~~~dse~~v~~L~~~~D~~~~~~~~s~~~~G~~~rqsk~R 246 (888)
T KOG0306|consen 175 FWDLETQHCFETHVDH-------RGEIWALVLDE-KLLVTAGTDSELKVWELAFEDDEKETNRYISTKLRGTFIRQSKGR 246 (888)
T ss_pred EEecccceeeeEEecc-------cceEEEEEEec-ceEEEEecCCceEEEEeecccccccccccceeeccceeeeccCCc
Confidence 9999999998887743 89999999998 46899999999999998211 11 111 1223445
Q ss_pred eEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCC----------C-CCCCcc-------eEEeEEEeccccceEEE
Q psy12614 247 ILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSG----------P-EQGSSV-------WVRSVNRVIHEGDVKSL 308 (708)
Q Consensus 247 i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g----------~-~~~~~~-------~~~~~~~~~~~~~v~~l 308 (708)
...++..++++++++-+.|..+.+|.+....+...... . +..... .+.......-...+.++
T Consensus 247 ~i~l~~d~s~r~~~c~g~d~~~e~frI~s~~E~~k~l~Kk~k~~Kkka~t~e~~~~v~~sl~~~i~r~~~ir~~~kiks~ 326 (888)
T KOG0306|consen 247 EINLVTDFSDRFLVCQGADKVIELFRIRSKEEIAKILSKKLKRAKKKAETEENEDDVEKSLSDEIKRLETIRTSAKIKSF 326 (888)
T ss_pred eeEEeecCcccEEEEecchhhhhheeecCHHHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHheechhheeEE
Confidence 56777888899999999999999999876322100000 0 000000 00000001113456666
Q ss_pred EEe-----CCEEEEEcCCCeEEEEeCCCCc-e---------eecCccCCCCceEEEEcCCcEEEEEcCCeEEEEEecCCC
Q psy12614 309 ALH-----GNRLYSGGLDSYLSLSYYPPKT-L---------VKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQ 373 (708)
Q Consensus 309 ~~~-----~~~l~s~~~d~~i~iw~~~~~~-~---------~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~ 373 (708)
.+- .+.|++ -.++.+..|.++... . ..+.++.....++++|.+...++++.++.+.+|+..+.+
T Consensus 327 dv~~~~~~~~~lv~-l~nNtv~~ysl~~s~~~~p~~~~~~~i~~~GHR~dVRsl~vS~d~~~~~Sga~~SikiWn~~t~k 405 (888)
T KOG0306|consen 327 DVTPSGGTENTLVL-LANNTVEWYSLENSGKTSPEADRTSNIEIGGHRSDVRSLCVSSDSILLASGAGESIKIWNRDTLK 405 (888)
T ss_pred EEEecCCcceeEEE-eecCceEEEEeccCCCCCccccccceeeeccchhheeEEEeecCceeeeecCCCcEEEEEccCcc
Confidence 665 223444 567788888776621 1 223345566788999999999999999999999999765
Q ss_pred CCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEEEc-CCceEEEEEEecCCcceeEEeecCCccccc
Q psy12614 374 STDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYST-ESCVRLHSLDLDGDKPQISRIKNLPAPLFK 452 (708)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~-d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~ 452 (708)
.+..+. .+.+.+..|-|.+++++.|. .|.+.+||+.. .. .+. ..+.|.+
T Consensus 406 --------------------ciRTi~---~~y~l~~~Fvpgd~~Iv~G~k~Gel~vfdlaS--~~-l~E---ti~AHdg- 455 (888)
T KOG0306|consen 406 --------------------CIRTIT---CGYILASKFVPGDRYIVLGTKNGELQVFDLAS--AS-LVE---TIRAHDG- 455 (888)
T ss_pred --------------------eeEEec---cccEEEEEecCCCceEEEeccCCceEEEEeeh--hh-hhh---hhhcccc-
Confidence 333333 34788999999999999987 99999999986 22 222 2567766
Q ss_pred ceeEEEEEecCCCeEEEEecCCc--EEEecCC-----CeEEEEEecCCCCCccCcceEEEEECCCCcEEEEEecCCeEEE
Q psy12614 453 SIFTHVLISADSTLLLAVSLNGP--LYIIDLS-----SLEIKYCVDPYKSNLMSDVISLVQMSECKQYIVCADRKSHVVI 525 (708)
Q Consensus 453 ~~i~~~~~s~d~~~l~~~~~dg~--i~~~~~~-----~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~i 525 (708)
.|.+++.+||++.+++++.|.+ +|++..- +.+.+-.+...+--.-.+.|.|+.+||||++||++--|++|+|
T Consensus 456 -aIWsi~~~pD~~g~vT~saDktVkfWdf~l~~~~~gt~~k~lsl~~~rtLel~ddvL~v~~Spdgk~LaVsLLdnTVkV 534 (888)
T KOG0306|consen 456 -AIWSISLSPDNKGFVTGSADKTVKFWDFKLVVSVPGTQKKVLSLKHTRTLELEDDVLCVSVSPDGKLLAVSLLDNTVKV 534 (888)
T ss_pred -ceeeeeecCCCCceEEecCCcEEEEEeEEEEeccCcccceeeeeccceEEeccccEEEEEEcCCCcEEEEEeccCeEEE
Confidence 6777999999999999999999 8887421 1111111111111111678999999999999999999999999
Q ss_pred EECC--ceeeecCCCCCCceEEEEcCCCCEEEEEecCCcEEEEEcCCCCCCchhhhhhccCchhhhcCCCCeeEEEeCCC
Q psy12614 526 WKNG--QHHASLPRYRKPSTAMAIHPTLSTLVTVYSDHRIVEFDLNRKAFTTFSRKLETNHPNEWLSRQLPVLGIEFDPQ 603 (708)
Q Consensus 526 w~~~--~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~ 603 (708)
|-++ +....+.||.-||.+|..|||++++++++.|.+|++|-++-|.+. +.+.+|++.|.++.|.|+
T Consensus 535 yflDtlKFflsLYGHkLPV~smDIS~DSklivTgSADKnVKiWGLdFGDCH-----------KS~fAHdDSvm~V~F~P~ 603 (888)
T KOG0306|consen 535 YFLDTLKFFLSLYGHKLPVLSMDISPDSKLIVTGSADKNVKIWGLDFGDCH-----------KSFFAHDDSVMSVQFLPK 603 (888)
T ss_pred EEecceeeeeeecccccceeEEeccCCcCeEEeccCCCceEEeccccchhh-----------hhhhcccCceeEEEEccc
Confidence 9999 555699999999999999999999999999999999999999876 788899999999999999
Q ss_pred CCceEEEEcCeeEEEEecCCCCCcc
Q psy12614 604 DSSLIYLMDDSALCVINKNKSLAHA 628 (708)
Q Consensus 604 ~~~l~~~~~d~~i~~wd~~~~~~~~ 628 (708)
..++.+++.|+.|+-||-.+.....
T Consensus 604 ~~~FFt~gKD~kvKqWDg~kFe~iq 628 (888)
T KOG0306|consen 604 THLFFTCGKDGKVKQWDGEKFEEIQ 628 (888)
T ss_pred ceeEEEecCcceEEeechhhhhhhe
Confidence 9999999999999999987665433
|
|
| >KOG1408|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-43 Score=338.87 Aligned_cols=536 Identities=13% Similarity=0.152 Sum_probs=399.7
Q ss_pred EEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEc--CCCcEEEEECCCCeEe
Q psy12614 29 INCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGG--LQGFVNEYDMRRLNIK 104 (708)
Q Consensus 29 v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~--~d~~i~vwd~~~~~~~ 104 (708)
-..++..|-..++|.- ..-.|.+||....+.-. .+..|. .++++++|+ |+++++|- ....+++|++.....+
T Consensus 40 ~~gLa~~p~Sgl~aYp-AGCvVVlfn~~~~tQ~h-lvnssR--k~~t~vAfS~~GryvatGEcG~~pa~kVw~la~h~vV 115 (1080)
T KOG1408|consen 40 ANGLASVPCSGLCAYP-AGCVVVLFNVDSCTQSH-LVNSSR--KPLTCVAFSQNGRYVATGECGRTPASKVWSLAFHGVV 115 (1080)
T ss_pred CCcccccccccceeec-cCcEEEEEcccccchhh-eecccC--cceeEEEEcCCCcEEEecccCCCccceeeeeccccch
Confidence 3456666766666642 22478999999877655 778888 899999999 88998885 6778999999999999
Q ss_pred EEEeecCCceEEEEEecCCCEEEEEeC--CCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCCeEEEEE
Q psy12614 105 SSTAVTSGTCWCLSVHKKKRLLAAGTE--QGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAAAVRVWD 182 (708)
Q Consensus 105 ~~~~~~~~~v~~~~~s~~~~~la~~~~--d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~i~iwd 182 (708)
..+..|.-.|+|++|+|.++++++.+. |-.|.+||++..... .-..-...|..++|+.||.|+++.+...|++|.
T Consensus 116 AEfvdHKY~vtcvaFsp~~kyvvSVGsQHDMIVnv~dWr~N~~~---asnkiss~Vsav~fsEdgSYfvT~gnrHvk~wy 192 (1080)
T KOG1408|consen 116 AEFVDHKYNVTCVAFSPGNKYVVSVGSQHDMIVNVNDWRVNSSG---ASNKISSVVSAVAFSEDGSYFVTSGNRHVKLWY 192 (1080)
T ss_pred hhhhhccccceeeeecCCCcEEEeeccccceEEEhhhhhhcccc---cccccceeEEEEEEccCCceeeeeeeeeEEEEE
Confidence 999999999999999999999998665 566888998765442 223346789999999999999999888999999
Q ss_pred cCCCceEEEE-Eecc--------------------------------cCC---C-----------CCceeEEEEEEccCC
Q psy12614 183 IHKGHAIHKM-SLDK--------------------------------SSK---F-----------SKNTAVWCVAFCADF 215 (708)
Q Consensus 183 ~~~~~~~~~~-~~~~--------------------------------~~~---~-----------~~~~~v~~~~~~~~~ 215 (708)
++.++..... .... .+| | -......|++.+. .
T Consensus 193 l~~~~KykdpiPl~gRs~~lg~lr~n~f~avaCg~gicAestfait~qGhLvEFSsRRLLDKWVqcRTTnAnCIcVs~-r 271 (1080)
T KOG1408|consen 193 LQIQSKYKDPIPLPGRSYFLGNLRFNEFLAVACGVGICAESTFAITAQGHLVEFSSRRLLDKWVQCRTTNANCICVSS-R 271 (1080)
T ss_pred eeccccccCCccccchhhhccccccchhhhhhhcCcccccceEEEecccceeeechhhhhhhhhhhhccccceeeeec-c
Confidence 9876521110 0000 000 0 0011112333332 1
Q ss_pred EEEEEcCCCcEEEEeCCCCeeEEEee------------------------ccccCeEEEEEeCCCCEEEEEecCCeEEEE
Q psy12614 216 TIITGDSGGFVRFWDGKTGVQWSDVK------------------------THKKDILALTVSEDENYLYCAGVDPTVVCF 271 (708)
Q Consensus 216 ~l~~~~~dg~i~~wd~~~~~~~~~~~------------------------~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw 271 (708)
.+++|+.+|.|++|+..+-..+.+++ +.-....++.|++....|.+...|..+++|
T Consensus 272 ~I~cgCa~g~vrlFnp~tL~y~~Tlpr~halg~d~a~~~q~~~~~s~~~~a~fPD~IA~~Fdet~~klscVYndhSlYvW 351 (1080)
T KOG1408|consen 272 LIACGCAKGMVRLFNPETLDYAGTLPRSHALGSDTANLSQPEPKNSESSPAIFPDAIACQFDETTDKLSCVYNDHSLYVW 351 (1080)
T ss_pred eEEEeeccceeeecCcchhhhccccccccccccchhhcccccccccccCcccCCceeEEEecCCCceEEEEEcCceEEEE
Confidence 37889999999999987755444431 111233568899999999999999999999
Q ss_pred EccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe-------------CCEEEEEcCCCeEEEEeCCCCc-----
Q psy12614 272 QRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH-------------GNRLYSGGLDSYLSLSYYPPKT----- 333 (708)
Q Consensus 272 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~-------------~~~l~s~~~d~~i~iw~~~~~~----- 333 (708)
|++. -+ +.-....+..|...|+.+..- ...+++++.|++||+|+++...
T Consensus 352 DvrD--------~~-----kvgk~~s~lyHS~ciW~Ve~~p~nv~~~~~aclp~~cF~TCSsD~TIRlW~l~~ctnn~vy 418 (1080)
T KOG1408|consen 352 DVRD--------VN-----KVGKCSSMLYHSACIWDVENLPCNVHSPTAACLPRGCFTTCSSDGTIRLWDLAFCTNNQVY 418 (1080)
T ss_pred eccc--------cc-----cccceeeeeeccceeeeeccccccccCcccccCCccceeEecCCCcEEEeeccccccccee
Confidence 9987 21 111355667788877776532 4679999999999999998622
Q ss_pred --------eee-------------------------cCccCCCCceEEEEcCCcEEEEE-cCCeEEEEEecCCCCCCCCC
Q psy12614 334 --------LVK-------------------------YPCTLAQSTPVSLAKDIQHVLLQ-YTSHLELWSLGSAQSTDLSS 379 (708)
Q Consensus 334 --------~~~-------------------------~~~~~~~~~~~~~s~~~~~l~~~-~~~~i~i~~~~~~~~~~~~~ 379 (708)
+.+ ..++..+.+++++||+|++|+++ ..|.+++|++.+-+
T Consensus 419 rRNils~~l~ki~y~d~~~q~~~d~~~~~fdka~~s~~d~r~G~R~~~vSp~gqhLAsGDr~GnlrVy~Lq~l~------ 492 (1080)
T KOG1408|consen 419 RRNILSANLSKIPYEDSTQQIMHDASAGIFDKALVSTCDSRFGFRALAVSPDGQHLASGDRGGNLRVYDLQELE------ 492 (1080)
T ss_pred ecccchhhhhcCccccCchhhhhhccCCcccccchhhcCcccceEEEEECCCcceecccCccCceEEEEehhhh------
Confidence 000 00122234579999999999997 67899999998754
Q ss_pred CCCCCcccCCCCceEEEEEEecCCCceEEEEeCC---CCcEEEEEc-CCceEEEEEEecCCcceeEEeecCCccccccee
Q psy12614 380 HSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSN---DGKYVAYST-ESCVRLHSLDLDGDKPQISRIKNLPAPLFKSIF 455 (708)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~---~g~~l~~~~-d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~i 455 (708)
.......|..+|.|+.||. ..++||++. |.-|.|||+.. +-..++ .+.+|.. .|
T Consensus 493 ---------------~~~~~eAHesEilcLeyS~p~~~~kLLASasrdRlIHV~Dv~r--ny~l~q---tld~HSs--sI 550 (1080)
T KOG1408|consen 493 ---------------YTCFMEAHESEILCLEYSFPVLTNKLLASASRDRLIHVYDVKR--NYDLVQ---TLDGHSS--SI 550 (1080)
T ss_pred ---------------hhhheecccceeEEEeecCchhhhHhhhhccCCceEEEEeccc--ccchhh---hhccccc--ce
Confidence 3344568999999999985 346788754 99999999986 222233 4888876 89
Q ss_pred EEEEEecCC--CeEEEEecCCc-EEEecCCCeEEEEEecCCCCCccCcceEEEEECCCCcEEEEEecCCeEEEEECC--c
Q psy12614 456 THVLISADS--TLLLAVSLNGP-LYIIDLSSLEIKYCVDPYKSNLMSDVISLVQMSECKQYIVCADRKSHVVIWKNG--Q 530 (708)
Q Consensus 456 ~~~~~s~d~--~~l~~~~~dg~-i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~--~ 530 (708)
+++.|..+| ..+++++.|.. +++....... ...|..+........+..++..|..+++++++.|..|+||+++ +
T Consensus 551 TsvKFa~~gln~~MiscGADksimFr~~qk~~~-g~~f~r~t~t~~ktTlYDm~Vdp~~k~v~t~cQDrnirif~i~sgK 629 (1080)
T KOG1408|consen 551 TSVKFACNGLNRKMISCGADKSIMFRVNQKASS-GRLFPRHTQTLSKTTLYDMAVDPTSKLVVTVCQDRNIRIFDIESGK 629 (1080)
T ss_pred eEEEEeecCCceEEEeccCchhhheehhccccC-ceeccccccccccceEEEeeeCCCcceEEEEecccceEEEeccccc
Confidence 999999888 78888889988 6665432111 1222211111115678899999999999999999999999999 4
Q ss_pred eeeecC---CCCCCceEEEEcCCCCEEEEEecCCcEEEEEcCCCCCCchhhhhhccCchhhhcCCCCeeEEEeCCCCCce
Q psy12614 531 HHASLP---RYRKPSTAMAIHPTLSTLVTVYSDHRIVEFDLNRKAFTTFSRKLETNHPNEWLSRQLPVLGIEFDPQDSSL 607 (708)
Q Consensus 531 ~~~~~~---~~~~~v~~l~~s~d~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~~~~l 607 (708)
..+.++ +|.+....+...|.|.+||+.+.|.++.++|+-++++. +...||.+.|+++.|++|-+.|
T Consensus 630 q~k~FKgs~~~eG~lIKv~lDPSgiY~atScsdktl~~~Df~sgEcv-----------A~m~GHsE~VTG~kF~nDCkHl 698 (1080)
T KOG1408|consen 630 QVKSFKGSRDHEGDLIKVILDPSGIYLATSCSDKTLCFVDFVSGECV-----------AQMTGHSEAVTGVKFLNDCKHL 698 (1080)
T ss_pred eeeeecccccCCCceEEEEECCCccEEEEeecCCceEEEEeccchhh-----------hhhcCcchheeeeeecccchhh
Confidence 444555 46677888999999999999999999999999999988 6788999999999999999999
Q ss_pred EEEEcCeeEEEEecCCCC
Q psy12614 608 IYLMDDSALCVINKNKSL 625 (708)
Q Consensus 608 ~~~~~d~~i~~wd~~~~~ 625 (708)
++++.||.|.||.+....
T Consensus 699 ISvsgDgCIFvW~lp~~m 716 (1080)
T KOG1408|consen 699 ISVSGDGCIFVWKLPLTM 716 (1080)
T ss_pred eeecCCceEEEEECchhH
Confidence 999999999999997543
|
|
| >KOG0272|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-46 Score=334.72 Aligned_cols=278 Identities=17% Similarity=0.272 Sum_probs=262.7
Q ss_pred cCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe----CCEEEEEcCCCcEEEEEC
Q psy12614 23 APEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF----NDRLFSGGLQGFVNEYDM 98 (708)
Q Consensus 23 ~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~----~~~l~s~~~d~~i~vwd~ 98 (708)
.+-+.+|..+.||+|++.||+|+-+|.+++|+..+...+. +|.||. ..|.++.|+ +..+|+|+.||++++|++
T Consensus 172 ~gd~rPis~~~fS~ds~~laT~swsG~~kvW~~~~~~~~~-~l~gH~--~~v~~~~fhP~~~~~~lat~s~Dgtvklw~~ 248 (459)
T KOG0272|consen 172 VGDTRPISGCSFSRDSKHLATGSWSGLVKVWSVPQCNLLQ-TLRGHT--SRVGAAVFHPVDSDLNLATASADGTVKLWKL 248 (459)
T ss_pred ccCCCcceeeEeecCCCeEEEeecCCceeEeecCCcceeE-EEeccc--cceeeEEEccCCCccceeeeccCCceeeecc
Confidence 3567899999999999999999999999999999996665 999999 999999999 348999999999999999
Q ss_pred CCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-e
Q psy12614 99 RRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-A 177 (708)
Q Consensus 99 ~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~ 177 (708)
++..++..+.+|...|..++|+|+|++|++++.|.+-++||+.++... ....+|...|.+++|.|||..+++|+.| .
T Consensus 249 ~~e~~l~~l~gH~~RVs~VafHPsG~~L~TasfD~tWRlWD~~tk~El--L~QEGHs~~v~~iaf~~DGSL~~tGGlD~~ 326 (459)
T KOG0272|consen 249 SQETPLQDLEGHLARVSRVAFHPSGKFLGTASFDSTWRLWDLETKSEL--LLQEGHSKGVFSIAFQPDGSLAATGGLDSL 326 (459)
T ss_pred CCCcchhhhhcchhhheeeeecCCCceeeecccccchhhcccccchhh--HhhcccccccceeEecCCCceeeccCccch
Confidence 999999999999999999999999999999999999999999998876 6778999999999999999999999999 9
Q ss_pred EEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeC-C
Q psy12614 178 VRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSE-D 255 (708)
Q Consensus 178 i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~-~ 255 (708)
-+|||+++|+++..+. +|..+|.+++|+|+|. +++|+.|++++|||++..+.+.++++|..-|+.+.|+| .
T Consensus 327 ~RvWDlRtgr~im~L~-------gH~k~I~~V~fsPNGy~lATgs~Dnt~kVWDLR~r~~ly~ipAH~nlVS~Vk~~p~~ 399 (459)
T KOG0272|consen 327 GRVWDLRTGRCIMFLA-------GHIKEILSVAFSPNGYHLATGSSDNTCKVWDLRMRSELYTIPAHSNLVSQVKYSPQE 399 (459)
T ss_pred hheeecccCcEEEEec-------ccccceeeEeECCCceEEeecCCCCcEEEeeecccccceecccccchhhheEecccC
Confidence 9999999999999887 4499999999999995 99999999999999999999999999999999999998 7
Q ss_pred CCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEEEcCCCeEEEEe
Q psy12614 256 ENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSGGLDSYLSLSY 328 (708)
Q Consensus 256 ~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~~~d~~i~iw~ 328 (708)
|.+|++++.|+++++|...+ .+ +...+.+|.+.|.++.++ +..+++++.|.++++|.
T Consensus 400 g~fL~TasyD~t~kiWs~~~--------~~--------~~ksLaGHe~kV~s~Dis~d~~~i~t~s~DRT~KLW~ 458 (459)
T KOG0272|consen 400 GYFLVTASYDNTVKIWSTRT--------WS--------PLKSLAGHEGKVISLDISPDSQAIATSSFDRTIKLWR 458 (459)
T ss_pred CeEEEEcccCcceeeecCCC--------cc--------cchhhcCCccceEEEEeccCCceEEEeccCceeeecc
Confidence 89999999999999999888 44 899999999999999999 88999999999999995
|
|
| >KOG1539|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-40 Score=324.65 Aligned_cols=527 Identities=15% Similarity=0.173 Sum_probs=412.4
Q ss_pred cCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEeCCEEEEEcCCCcEEEEECCCC-
Q psy12614 23 APEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWFNDRLFSGGLQGFVNEYDMRRL- 101 (708)
Q Consensus 23 ~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~~~~l~s~~~d~~i~vwd~~~~- 101 (708)
..+++.|+|++-..+ ++.+|+.+ .|.+|- .++.+..++.+|. +.|.-+.--|..++++..++.+.+|+..++
T Consensus 73 ~~lp~~I~alas~~~--~vy~A~g~-~i~~~~--rgk~i~~~~~~~~--a~v~~l~~fGe~lia~d~~~~l~vw~~s~~~ 145 (910)
T KOG1539|consen 73 KPLPDKITALASDKD--YVYVASGN-KIYAYA--RGKHIRHTTLLHG--AKVHLLLPFGEHLIAVDISNILFVWKTSSIQ 145 (910)
T ss_pred CCCCCceEEEEecCc--eEEEecCc-EEEEEE--ccceEEEEecccc--ceEEEEeeecceEEEEEccCcEEEEEecccc
Confidence 478999999987655 45555433 577765 4556667889998 889888888999999999999999998884
Q ss_pred eE----eEEEeecCCceEEEEEecC--CCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecC
Q psy12614 102 NI----KSSTAVTSGTCWCLSVHKK--KRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCA 175 (708)
Q Consensus 102 ~~----~~~~~~~~~~v~~~~~s~~--~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~ 175 (708)
.. ...++.....|+++ ++|. -+.++.|+.+|.+.+|++++++.+ ..+.++...|+++.=+|--..+|.|..
T Consensus 146 ~e~~l~~~~~~~~~~~Ital-~HP~TYLNKIvvGs~~G~lql~Nvrt~K~v--~~f~~~~s~IT~ieqsPaLDVVaiG~~ 222 (910)
T KOG1539|consen 146 EELYLQSTFLKVEGDFITAL-LHPSTYLNKIVVGSSQGRLQLWNVRTGKVV--YTFQEFFSRITAIEQSPALDVVAIGLE 222 (910)
T ss_pred ccccccceeeeccCCceeeE-ecchhheeeEEEeecCCcEEEEEeccCcEE--EEecccccceeEeccCCcceEEEEecc
Confidence 22 12222333336665 4554 356889999999999999999998 788888999999999999999999999
Q ss_pred C-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE--EEEEcCCCcEEEEeCCCCeeEEEee-ccccCeEEEE
Q psy12614 176 A-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT--IITGDSGGFVRFWDGKTGVQWSDVK-THKKDILALT 251 (708)
Q Consensus 176 d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--l~~~~~dg~i~~wd~~~~~~~~~~~-~~~~~i~~~~ 251 (708)
+ +|.+++++.++.+.+++.. .+.|++++|..||. +++|+..|.+.+||++..+.+..+. .|.+.|..+.
T Consensus 223 ~G~ViifNlK~dkil~sFk~d-------~g~VtslSFrtDG~p~las~~~~G~m~~wDLe~kkl~~v~~nah~~sv~~~~ 295 (910)
T KOG1539|consen 223 NGTVIIFNLKFDKILMSFKQD-------WGRVTSLSFRTDGNPLLASGRSNGDMAFWDLEKKKLINVTRNAHYGSVTGAT 295 (910)
T ss_pred CceEEEEEcccCcEEEEEEcc-------ccceeEEEeccCCCeeEEeccCCceEEEEEcCCCeeeeeeeccccCCcccce
Confidence 9 9999999999999999864 58999999999995 8889999999999999888776665 7889999999
Q ss_pred EeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe---CCEEEEEcCCCeEEEEe
Q psy12614 252 VSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH---GNRLYSGGLDSYLSLSY 328 (708)
Q Consensus 252 ~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~---~~~l~s~~~d~~i~iw~ 328 (708)
|.|....+++++.|+.+++|=.++ +. .. ...++...+|..+..++.|. +..+.+++.|++++.++
T Consensus 296 fl~~epVl~ta~~DnSlk~~vfD~--------~d--g~--pR~LR~R~GHs~Pp~~irfy~~~g~~ilsa~~Drt~r~fs 363 (910)
T KOG1539|consen 296 FLPGEPVLVTAGADNSLKVWVFDS--------GD--GV--PRLLRSRGGHSAPPSCIRFYGSQGHFILSAKQDRTLRSFS 363 (910)
T ss_pred ecCCCceEeeccCCCceeEEEeeC--------CC--Cc--chheeeccCCCCCchheeeeccCcEEEEecccCcchhhhh
Confidence 999999999999999999987776 33 11 22456778999999999998 88999999999999888
Q ss_pred CCCCceeecC-----------------ccCCCCceEEEEcC-------CcEEEE-EcCCeEEEEEecCCCCCCCCCCCCC
Q psy12614 329 YPPKTLVKYP-----------------CTLAQSTPVSLAKD-------IQHVLL-QYTSHLELWSLGSAQSTDLSSHSNT 383 (708)
Q Consensus 329 ~~~~~~~~~~-----------------~~~~~~~~~~~s~~-------~~~l~~-~~~~~i~i~~~~~~~~~~~~~~~~~ 383 (708)
+......+-. ....-++.+.|..+ .+.+++ ..+...+.|+..+...
T Consensus 364 ~~~e~~~~~l~~~~~~~~~kk~~~~~~~~~k~p~i~~fa~~~~RE~~W~Nv~~~h~~~~~~~tW~~~n~~~--------- 434 (910)
T KOG1539|consen 364 VISESQSQELGQLHNKKRAKKVNVFSTEKLKLPPIVEFAFENAREKEWDNVITAHKGKRSAYTWNFRNKTS--------- 434 (910)
T ss_pred hhHHHHhHhhcccccccccccccccchhhhcCCcceeeecccchhhhhcceeEEecCcceEEEEeccCccc---------
Confidence 7543211100 00111223344332 233444 3667789999887540
Q ss_pred CcccCCCCceEEEEE--EecCCCceEEEEeCCCCcEEEEEc-CCceEEEEEEecCCcceeEEeecCCcccccceeEEEEE
Q psy12614 384 TGVPLLSFPRLIVKM--SAVNNATIRCSVVSNDGKYVAYST-ESCVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVLI 460 (708)
Q Consensus 384 ~~~~~~~~~~~~~~~--~~~~~~~i~~~~~s~~g~~l~~~~-d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 460 (708)
....+.. .......+++++.++.|.+.+.|. .|.|.+|+++. +. .-....+-+.|.. .|+.++.
T Consensus 435 --------G~~~L~~~~~~~~~~~~~av~vs~CGNF~~IG~S~G~Id~fNmQS--Gi-~r~sf~~~~ah~~--~V~gla~ 501 (910)
T KOG1539|consen 435 --------GRHVLDPKRFKKDDINATAVCVSFCGNFVFIGYSKGTIDRFNMQS--GI-HRKSFGDSPAHKG--EVTGLAV 501 (910)
T ss_pred --------ccEEecCccccccCcceEEEEEeccCceEEEeccCCeEEEEEccc--Ce-eecccccCccccC--ceeEEEe
Confidence 0011100 012447789999999999999976 99999999997 32 2222222345544 8888999
Q ss_pred ecCCCeEEEEecCCc--EEEecCCCeEEEEEecCCCCCccCcceEEEEECCCCcEEEEEecCCeEEEEECC--ceeeecC
Q psy12614 461 SADSTLLLAVSLNGP--LYIIDLSSLEIKYCVDPYKSNLMSDVISLVQMSECKQYIVCADRKSHVVIWKNG--QHHASLP 536 (708)
Q Consensus 461 s~d~~~l~~~~~dg~--i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~--~~~~~~~ 536 (708)
..-++.+++++.+|. .|++... ..+..+.. ...++++..+.....+|.+.+|-.|+++|.. +..+.+.
T Consensus 502 D~~n~~~vsa~~~Gilkfw~f~~k--~l~~~l~l------~~~~~~iv~hr~s~l~a~~~ddf~I~vvD~~t~kvvR~f~ 573 (910)
T KOG1539|consen 502 DGTNRLLVSAGADGILKFWDFKKK--VLKKSLRL------GSSITGIVYHRVSDLLAIALDDFSIRVVDVVTRKVVREFW 573 (910)
T ss_pred cCCCceEEEccCcceEEEEecCCc--ceeeeecc------CCCcceeeeeehhhhhhhhcCceeEEEEEchhhhhhHHhh
Confidence 888899999999999 8988877 34444443 4578899999999999999999999999999 4445899
Q ss_pred CCCCCceEEEEcCCCCEEEEEecCCcEEEEEcCCCCCCchhhhhhccCchhhhcCCCCeeEEEeCCCCCceEEEEcC-ee
Q psy12614 537 RYRKPSTAMAIHPTLSTLVTVYSDHRIVEFDLNRKAFTTFSRKLETNHPNEWLSRQLPVLGIEFDPQDSSLIYLMDD-SA 615 (708)
Q Consensus 537 ~~~~~v~~l~~s~d~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~~~~l~~~~~d-~~ 615 (708)
+|...|++++|||||++|++++.|++|++||+.++.+++ ...-..++.++.|||+|.+|||++.| ..
T Consensus 574 gh~nritd~~FS~DgrWlisasmD~tIr~wDlpt~~lID------------~~~vd~~~~sls~SPngD~LAT~Hvd~~g 641 (910)
T KOG1539|consen 574 GHGNRITDMTFSPDGRWLISASMDSTIRTWDLPTGTLID------------GLLVDSPCTSLSFSPNGDFLATVHVDQNG 641 (910)
T ss_pred ccccceeeeEeCCCCcEEEEeecCCcEEEEeccCcceee------------eEecCCcceeeEECCCCCEEEEEEecCce
Confidence 999999999999999999999999999999999998872 22456789999999999999999998 67
Q ss_pred EEEEe
Q psy12614 616 LCVIN 620 (708)
Q Consensus 616 i~~wd 620 (708)
|++|-
T Consensus 642 IylWs 646 (910)
T KOG1539|consen 642 IYLWS 646 (910)
T ss_pred EEEEE
Confidence 99994
|
|
| >KOG2106|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-39 Score=301.49 Aligned_cols=506 Identities=16% Similarity=0.212 Sum_probs=390.7
Q ss_pred eeeeeeeccCCCCcEEEEEEcCCCCEEEEEeCCC--------cEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe----CC
Q psy12614 15 GVHNIKFYAPEPKVINCIACEPKSSRLAVSRADQ--------SIEIWDISETPHVDRVFIGDPLSNSIECLTWF----ND 82 (708)
Q Consensus 15 ~~~~~~~~~~h~~~v~~~~~s~~~~~la~~~~dg--------~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~----~~ 82 (708)
+-+.+|++.+|+..|.|++.+||.-++|+|...| .|+|||..+-..+. .+.... ..|.+++|+ |.
T Consensus 93 ee~~Qr~y~GH~ddikc~~vHPdri~vatGQ~ag~~g~~~~phvriWdsv~L~TL~-V~g~f~--~GV~~vaFsk~~~G~ 169 (626)
T KOG2106|consen 93 EERSQRHYLGHNDDIKCMAVHPDRIRVATGQGAGTSGRPLQPHVRIWDSVTLSTLH-VIGFFD--RGVTCVAFSKINGGS 169 (626)
T ss_pred hhhhcccccCCCCceEEEeecCCceeeccCcccccCCCcCCCeeeecccccceeee-eecccc--ccceeeeecccCCCc
Confidence 4457889999999999999999999999886555 39999987766554 555554 899999999 66
Q ss_pred EEEEE--cCCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEe-cccc-cccE
Q psy12614 83 RLFSG--GLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKL-LDRQ-QGRI 158 (708)
Q Consensus 83 ~l~s~--~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~-~~~~-~~~v 158 (708)
.|... +.+..+.+||++.+......+.....|....|+|-+.-|+..+..+.+.+|+++++.+..... +..+ ..-|
T Consensus 170 ~l~~vD~s~~h~lSVWdWqk~~~~~~vk~sne~v~~a~FHPtd~nliit~Gk~H~~Fw~~~~~~l~k~~~~fek~ekk~V 249 (626)
T KOG2106|consen 170 LLCAVDDSNPHMLSVWDWQKKAKLGPVKTSNEVVFLATFHPTDPNLIITCGKGHLYFWTLRGGSLVKRQGIFEKREKKFV 249 (626)
T ss_pred eEEEecCCCccccchhhchhhhccCcceeccceEEEEEeccCCCcEEEEeCCceEEEEEccCCceEEEeeccccccceEE
Confidence 66655 456779999999999888888888899999999977766666777999999999887764332 3333 3679
Q ss_pred EEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEEEEcCCCcEEEEeCCCCeeE
Q psy12614 159 LCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQW 237 (708)
Q Consensus 159 ~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~ 237 (708)
.|++|.++|+ +++|..+ .|.||+..+.+..+... . |++.|.+++...+|+|++|+.|..|..|| ..-+.+
T Consensus 250 l~v~F~engd-viTgDS~G~i~Iw~~~~~~~~k~~~-a------H~ggv~~L~~lr~GtllSGgKDRki~~Wd-~~y~k~ 320 (626)
T KOG2106|consen 250 LCVTFLENGD-VITGDSGGNILIWSKGTNRISKQVH-A------HDGGVFSLCMLRDGTLLSGGKDRKIILWD-DNYRKL 320 (626)
T ss_pred EEEEEcCCCC-EEeecCCceEEEEeCCCceEEeEee-e------cCCceEEEEEecCccEeecCccceEEecc-cccccc
Confidence 9999999997 6777777 99999987666666555 2 38999999999999999999999999999 333333
Q ss_pred E--EeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CC
Q psy12614 238 S--DVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GN 313 (708)
Q Consensus 238 ~--~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~ 313 (708)
+ .++...+.|..++-...+ |+.|...+.|..=.+++ + ......+|......++.+ .+
T Consensus 321 r~~elPe~~G~iRtv~e~~~d--i~vGTtrN~iL~Gt~~~--------~---------f~~~v~gh~delwgla~hps~~ 381 (626)
T KOG2106|consen 321 RETELPEQFGPIRTVAEGKGD--ILVGTTRNFILQGTLEN--------G---------FTLTVQGHGDELWGLATHPSKN 381 (626)
T ss_pred ccccCchhcCCeeEEecCCCc--EEEeeccceEEEeeecC--------C---------ceEEEEecccceeeEEcCCChh
Confidence 3 345556778777644333 88888888888777777 5 355667899999999988 88
Q ss_pred EEEEEcCCCeEEEEeCCCCc-eeecCccCCCCceEEEEcCCcEEEE-EcCCeEEEEEecCCCCCCCCCCCCCCcccCCCC
Q psy12614 314 RLYSGGLDSYLSLSYYPPKT-LVKYPCTLAQSTPVSLAKDIQHVLL-QYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSF 391 (708)
Q Consensus 314 ~l~s~~~d~~i~iw~~~~~~-~~~~~~~~~~~~~~~~s~~~~~l~~-~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (708)
.+++++.|+.+++|+ +.+. ..+.. .....++.|.|.| .++. ...+...+.|.++.
T Consensus 382 q~~T~gqdk~v~lW~-~~k~~wt~~~--~d~~~~~~fhpsg-~va~Gt~~G~w~V~d~e~~------------------- 438 (626)
T KOG2106|consen 382 QLLTCGQDKHVRLWN-DHKLEWTKII--EDPAECADFHPSG-VVAVGTATGRWFVLDTETQ------------------- 438 (626)
T ss_pred heeeccCcceEEEcc-CCceeEEEEe--cCceeEeeccCcc-eEEEeeccceEEEEecccc-------------------
Confidence 999999999999999 3332 33333 4566789999999 6665 47888999998873
Q ss_pred ceEEEEEEecCCCceEEEEeCCCCcEEEEEc-CCceEEEEEEecCCcceeEEeecCCcccccceeEEEEEecCCCeEEEE
Q psy12614 392 PRLIVKMSAVNNATIRCSVVSNDGKYVAYST-ESCVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVLISADSTLLLAV 470 (708)
Q Consensus 392 ~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~-d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~~~ 470 (708)
.++.+... ..++++++|+|+|.+||+|+ |+.|+||.++.++ ..+.++.+..+ ..|+++.||+|+++|.+.
T Consensus 439 --~lv~~~~d-~~~ls~v~ysp~G~~lAvgs~d~~iyiy~Vs~~g--~~y~r~~k~~g----s~ithLDwS~Ds~~~~~~ 509 (626)
T KOG2106|consen 439 --DLVTIHTD-NEQLSVVRYSPDGAFLAVGSHDNHIYIYRVSANG--RKYSRVGKCSG----SPITHLDWSSDSQFLVSN 509 (626)
T ss_pred --eeEEEEec-CCceEEEEEcCCCCEEEEecCCCeEEEEEECCCC--cEEEEeeeecC----ceeEEeeecCCCceEEec
Confidence 46666666 89999999999999999977 9999999999743 45665444444 489999999999999988
Q ss_pred ecCCcEEEecCCCeEEEEEecCCCCCccCcceEEEEECCCC---cEEEEEecCCeEEEEECCceeeecCCCCCCceEEEE
Q psy12614 471 SLNGPLYIIDLSSLEIKYCVDPYKSNLMSDVISLVQMSECK---QYIVCADRKSHVVIWKNGQHHASLPRYRKPSTAMAI 547 (708)
Q Consensus 471 ~~dg~i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~---~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~v~~l~~ 547 (708)
+.|-.|.-+..+.++.... +..+.|.... -+.+.+ ..+...|..++-
T Consensus 510 S~d~eiLyW~~~~~~~~ts------------~kDvkW~t~~c~lGF~v~g------------------~s~~t~i~a~~r 559 (626)
T KOG2106|consen 510 SGDYEILYWKPSECKQITS------------VKDVKWATYTCTLGFEVFG------------------GSDGTDINAVAR 559 (626)
T ss_pred cCceEEEEEccccCcccce------------ecceeeeeeEEEEEEEEec------------------ccCCchHHHhhh
Confidence 8887732224343222222 3334442111 122222 234557788888
Q ss_pred cCCCCEEEEEecCCcEEEEEcCCCCCCchhhhhhccCchhhhcCCCCeeEEEeCCCCCceEEEEcCeeEEEEec
Q psy12614 548 HPTLSTLVTVYSDHRIVEFDLNRKAFTTFSRKLETNHPNEWLSRQLPVLGIEFDPQDSSLIYLMDDSALCVINK 621 (708)
Q Consensus 548 s~d~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~~~~l~~~~~d~~i~~wd~ 621 (708)
+.+.++||+|.+.|+|++|..+.-+.. ....++.+|++.|.+++|..+...|++.+.|..|..|++
T Consensus 560 s~~~~~lA~gdd~g~v~lf~yPc~s~r--------A~~he~~ghs~~vt~V~Fl~~d~~li~tg~D~Si~qW~l 625 (626)
T KOG2106|consen 560 SHCEKLLASGDDFGKVHLFSYPCSSPR--------APSHEYGGHSSHVTNVAFLCKDSHLISTGKDTSIMQWRL 625 (626)
T ss_pred hhhhhhhhccccCceEEEEccccCCCc--------ccceeeccccceeEEEEEeeCCceEEecCCCceEEEEEe
Confidence 889999999999999999999877665 355788899999999999999999998889999999987
|
|
| >KOG0272|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-43 Score=316.94 Aligned_cols=273 Identities=21% Similarity=0.277 Sum_probs=250.2
Q ss_pred CcEEEEEEe--CCEEEEEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEecC--CCEEEEEeCCCcEEEEEccCCcEEE
Q psy12614 72 NSIECLTWF--NDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKK--KRLLAAGTEQGHINLFQISDEGLLY 147 (708)
Q Consensus 72 ~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~--~~~la~~~~d~~i~iwd~~~~~~~~ 147 (708)
.+|..+.|+ ++.|++|+.+|.+++|+..+...+.++.+|...|.++.|+|. +..+|+|+.||++++|++++...+
T Consensus 176 rPis~~~fS~ds~~laT~swsG~~kvW~~~~~~~~~~l~gH~~~v~~~~fhP~~~~~~lat~s~Dgtvklw~~~~e~~l- 254 (459)
T KOG0272|consen 176 RPISGCSFSRDSKHLATGSWSGLVKVWSVPQCNLLQTLRGHTSRVGAAVFHPVDSDLNLATASADGTVKLWKLSQETPL- 254 (459)
T ss_pred CcceeeEeecCCCeEEEeecCCceeEeecCCcceeEEEeccccceeeEEEccCCCccceeeeccCCceeeeccCCCcch-
Confidence 799999999 999999999999999999999999999999999999999997 568999999999999999988776
Q ss_pred EEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCc
Q psy12614 148 EKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGF 225 (708)
Q Consensus 148 ~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~ 225 (708)
..+.+|..+|..++|+|+|++|++++.| +-++||++++..+.... +|...|.+++|.+||. +++|+.|..
T Consensus 255 -~~l~gH~~RVs~VafHPsG~~L~TasfD~tWRlWD~~tk~ElL~QE-------GHs~~v~~iaf~~DGSL~~tGGlD~~ 326 (459)
T KOG0272|consen 255 -QDLEGHLARVSRVAFHPSGKFLGTASFDSTWRLWDLETKSELLLQE-------GHSKGVFSIAFQPDGSLAATGGLDSL 326 (459)
T ss_pred -hhhhcchhhheeeeecCCCceeeecccccchhhcccccchhhHhhc-------ccccccceeEecCCCceeeccCccch
Confidence 8899999999999999999999999999 99999999988765544 5699999999999997 779999999
Q ss_pred EEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccce
Q psy12614 226 VRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDV 305 (708)
Q Consensus 226 i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v 305 (708)
-+|||+++|+++..+.+|..+|.+++|+|+|..|++|+.|++++|||++. .+ ....+.+|..-|
T Consensus 327 ~RvWDlRtgr~im~L~gH~k~I~~V~fsPNGy~lATgs~Dnt~kVWDLR~--------r~--------~ly~ipAH~nlV 390 (459)
T KOG0272|consen 327 GRVWDLRTGRCIMFLAGHIKEILSVAFSPNGYHLATGSSDNTCKVWDLRM--------RS--------ELYTIPAHSNLV 390 (459)
T ss_pred hheeecccCcEEEEecccccceeeEeECCCceEEeecCCCCcEEEeeecc--------cc--------cceecccccchh
Confidence 99999999999999999999999999999999999999999999999998 54 578889999999
Q ss_pred EEEEEe---CCEEEEEcCCCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEEEcCCeEEEEEecCCCCCCCCCCCC
Q psy12614 306 KSLALH---GNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSN 382 (708)
Q Consensus 306 ~~l~~~---~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~ 382 (708)
+.+.|. |.+|+|++.|+++++|...+..
T Consensus 391 S~Vk~~p~~g~fL~TasyD~t~kiWs~~~~~------------------------------------------------- 421 (459)
T KOG0272|consen 391 SQVKYSPQEGYFLVTASYDNTVKIWSTRTWS------------------------------------------------- 421 (459)
T ss_pred hheEecccCCeEEEEcccCcceeeecCCCcc-------------------------------------------------
Confidence 999998 8999999999999999875543
Q ss_pred CCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEEEc-CCceEEEE
Q psy12614 383 TTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYST-ESCVRLHS 430 (708)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~-d~~i~i~~ 430 (708)
+.+...+|.+.|.++++++|+++++++. |.++++|.
T Consensus 422 ------------~~ksLaGHe~kV~s~Dis~d~~~i~t~s~DRT~KLW~ 458 (459)
T KOG0272|consen 422 ------------PLKSLAGHEGKVISLDISPDSQAIATSSFDRTIKLWR 458 (459)
T ss_pred ------------cchhhcCCccceEEEEeccCCceEEEeccCceeeecc
Confidence 3334458899999999999999999855 99999995
|
|
| >KOG1063|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-39 Score=312.07 Aligned_cols=575 Identities=17% Similarity=0.208 Sum_probs=402.4
Q ss_pred eeeeccCCCCcEEEEEEcCCCC---EEEEEeCCCcEEEEeCCCCCe-EEEEEecCCCCCcEEEEEEe-CCEEEE-EcCCC
Q psy12614 18 NIKFYAPEPKVINCIACEPKSS---RLAVSRADQSIEIWDISETPH-VDRVFIGDPLSNSIECLTWF-NDRLFS-GGLQG 91 (708)
Q Consensus 18 ~~~~~~~h~~~v~~~~~s~~~~---~la~~~~dg~v~iwd~~~~~~-~~~~~~~h~~~~~v~~l~~~-~~~l~s-~~~d~ 91 (708)
..-.+.||.++|+|+.+-|+.+ ++++|+.||.|++|.+..... ....+++|. +.++++. ...+.+ ...|+
T Consensus 46 i~t~l~GH~a~VnC~~~l~~s~~~a~~vsG~sD~~v~lW~l~~~~~~~i~~~~g~~----~~~~cv~a~~~~~~~~~ad~ 121 (764)
T KOG1063|consen 46 IVTTLDGHVARVNCVHWLPTSEIVAEMVSGDSDGRVILWKLRDEYLIKIYTIQGHC----KECVCVVARSSVMTCKAADG 121 (764)
T ss_pred eEEeccCCccceEEEEEcccccccceEEEccCCCcEEEEEEeehheEEEEeecCcc----eeEEEEEeeeeEEEeeccCc
Confidence 3456899999999999999887 899999999999999994333 234666666 5666666 333333 37999
Q ss_pred cEEEEECCCCe--EeEEEeecCC--ceEEEEEecCC-C-EEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECC
Q psy12614 92 FVNEYDMRRLN--IKSSTAVTSG--TCWCLSVHKKK-R-LLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHS 165 (708)
Q Consensus 92 ~i~vwd~~~~~--~~~~~~~~~~--~v~~~~~s~~~-~-~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~ 165 (708)
++.+||.+..+ +...+....+ -..|+++.|+. . .+|.|+.+..|.++.-...+......+.+|.+.|.+++|..
T Consensus 122 ~v~vw~~~~~e~~~~~~~rf~~k~~ipLcL~~~~~~~~~lla~Ggs~~~v~~~s~~~d~f~~v~el~GH~DWIrsl~f~~ 201 (764)
T KOG1063|consen 122 TVSVWDKQQDEVFLLAVLRFEIKEAIPLCLAALKNNKTFLLACGGSKFVVDLYSSSADSFARVAELEGHTDWIRSLAFAR 201 (764)
T ss_pred eEEEeecCCCceeeehheehhhhhHhhHHHhhhccCCcEEEEecCcceEEEEeccCCcceeEEEEeeccchhhhhhhhhc
Confidence 99999996655 3333332222 23455666633 3 45667778888888877777776788999999999999976
Q ss_pred CC---CEEEEecCC-eEEEEEcCCCce---------------------EEEEE----ecccCCCCCceeEEEEEEccCC-
Q psy12614 166 SG---DYLVTGCAA-AVRVWDIHKGHA---------------------IHKMS----LDKSSKFSKNTAVWCVAFCADF- 215 (708)
Q Consensus 166 d~---~~l~~~~~d-~i~iwd~~~~~~---------------------~~~~~----~~~~~~~~~~~~v~~~~~~~~~- 215 (708)
.+ -+|++++.| .|++|.+.-+.. ...+. ...-- .+|+..|+++.|.|.+
T Consensus 202 ~~~~~~~laS~SQD~yIRiW~i~~~~~~~~~~~e~~~t~~~~~~~f~~l~~i~~~is~eall-~GHeDWV~sv~W~p~~~ 280 (764)
T KOG1063|consen 202 LGGDDLLLASSSQDRYIRIWRIVLGDDEDSNEREDSLTTLSNLPVFMILEEIQYRISFEALL-MGHEDWVYSVWWHPEGL 280 (764)
T ss_pred cCCCcEEEEecCCceEEEEEEEEecCCccccccccccccccCCceeeeeeeEEEEEehhhhh-cCcccceEEEEEccchh
Confidence 54 478999999 999998753320 00111 00001 1569999999999999
Q ss_pred EEEEEcCCCcEEEEeCCCCe-------eEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCC
Q psy12614 216 TIITGDSGGFVRFWDGKTGV-------QWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQG 288 (708)
Q Consensus 216 ~l~~~~~dg~i~~wd~~~~~-------~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~ 288 (708)
.|++++.|.++.+|...+.. .+....+.........|+|+++.+++-+..|..++|....
T Consensus 281 ~LLSASaDksmiiW~pd~~tGiWv~~vRlGe~gg~a~GF~g~lw~~n~~~ii~~g~~Gg~hlWkt~d------------- 347 (764)
T KOG1063|consen 281 DLLSASADKSMIIWKPDENTGIWVDVVRLGEVGGSAGGFWGGLWSPNSNVIIAHGRTGGFHLWKTKD------------- 347 (764)
T ss_pred hheecccCcceEEEecCCccceEEEEEEeecccccccceeeEEEcCCCCEEEEecccCcEEEEeccC-------------
Confidence 59999999999999876542 1222334455688899999999999999999999998322
Q ss_pred CcceEEeEEEeccccceEEEEEe--CCEEEEEcCCCeEEEEeCCCCc--eeecCccCC---CCceEEEEcCCcEEEE-Ec
Q psy12614 289 SSVWVRSVNRVIHEGDVKSLALH--GNRLYSGGLDSYLSLSYYPPKT--LVKYPCTLA---QSTPVSLAKDIQHVLL-QY 360 (708)
Q Consensus 289 ~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~~~--~~~~~~~~~---~~~~~~~s~~~~~l~~-~~ 360 (708)
...|.......+|.+.|+.++|+ |.+|++.|.|.+-|++..-.++ ...+..|.. ...++++-+....+++ +.
T Consensus 348 ~~~w~~~~~iSGH~~~V~dv~W~psGeflLsvs~DQTTRlFa~wg~q~~wHEiaRPQiHGyDl~c~~~vn~~~~FVSgAd 427 (764)
T KOG1063|consen 348 KTFWTQEPVISGHVDGVKDVDWDPSGEFLLSVSLDQTTRLFARWGRQQEWHEIARPQIHGYDLTCLSFVNEDLQFVSGAD 427 (764)
T ss_pred ccceeeccccccccccceeeeecCCCCEEEEeccccceeeecccccccceeeecccccccccceeeehccCCceeeeccc
Confidence 34688888889999999999999 9999999999999998765333 222222222 3356777774334444 46
Q ss_pred CCeEEEEEecCCCC----------------------CCCCCCCCCCccc-----------------------CCCCc--e
Q psy12614 361 TSHLELWSLGSAQS----------------------TDLSSHSNTTGVP-----------------------LLSFP--R 393 (708)
Q Consensus 361 ~~~i~i~~~~~~~~----------------------~~~~~~~~~~~~~-----------------------~~~~~--~ 393 (708)
+.-+++|+....-. .++.|.+.+.+.+ +..+| .
T Consensus 428 EKVlRvF~aPk~fv~~l~~i~g~~~~~~~~~p~gA~VpaLGLSnKa~~~~e~~~G~~~~~~~et~~~~~p~~L~ePP~Ed 507 (764)
T KOG1063|consen 428 EKVLRVFEAPKSFVKSLMAICGKCFKGSDELPDGANVPALGLSNKAFFPGETNTGGEAAVCAETPLAAAPCELTEPPTED 507 (764)
T ss_pred ceeeeeecCcHHHHHHHHHHhCccccCchhcccccccccccccCCCCcccccccccccceeeecccccCchhccCCChHH
Confidence 66788887642211 1111111111110 00000 0
Q ss_pred EEE--------EEEecCCCceEEEEeCCCCcEEEEEc------CCceEEEEEEecCCcceeEEeecCCcccccceeEEEE
Q psy12614 394 LIV--------KMSAVNNATIRCSVVSNDGKYVAYST------ESCVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVL 459 (708)
Q Consensus 394 ~~~--------~~~~~~~~~i~~~~~s~~g~~l~~~~------d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 459 (708)
++. +..-+|...|.+++.+|+|+++|++. ...|++|+..+-. ..+ .+.+|.- .|+.++
T Consensus 508 qLq~~tLwPEv~KLYGHGyEv~~l~~s~~gnliASaCKS~~~ehAvI~lw~t~~W~---~~~---~L~~HsL--TVT~l~ 579 (764)
T KOG1063|consen 508 QLQQNTLWPEVHKLYGHGYEVYALAISPTGNLIASACKSSLKEHAVIRLWNTANWL---QVQ---ELEGHSL--TVTRLA 579 (764)
T ss_pred HHHHhccchhhHHhccCceeEEEEEecCCCCEEeehhhhCCccceEEEEEeccchh---hhh---eecccce--EEEEEE
Confidence 000 11127889999999999999999832 3468999887522 222 2777854 888899
Q ss_pred EecCCCeEEEEecCCc--EEEecCCCeEEEEEecCCCCCccCcceEEEEECCCCcEEEEEecCCeEEEEECCce--ee--
Q psy12614 460 ISADSTLLLAVSLNGP--LYIIDLSSLEIKYCVDPYKSNLMSDVISLVQMSECKQYIVCADRKSHVVIWKNGQH--HA-- 533 (708)
Q Consensus 460 ~s~d~~~l~~~~~dg~--i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~--~~-- 533 (708)
|||||++|++++.|.. +|...... ..-..+...+.| ..-|.+..|+|++.++||+|.|.+|++|...+. .+
T Consensus 580 FSpdg~~LLsvsRDRt~sl~~~~~~~-~~e~~fa~~k~H--tRIIWdcsW~pde~~FaTaSRDK~VkVW~~~~~~d~~i~ 656 (764)
T KOG1063|consen 580 FSPDGRYLLSVSRDRTVSLYEVQEDI-KDEFRFACLKAH--TRIIWDCSWSPDEKYFATASRDKKVKVWEEPDLRDKYIS 656 (764)
T ss_pred ECCCCcEEEEeecCceEEeeeeeccc-chhhhhcccccc--ceEEEEcccCcccceeEEecCCceEEEEeccCchhhhhh
Confidence 9999999999999999 88874332 222234445566 899999999999999999999999999999844 22
Q ss_pred --ecCCCCCCceEEEEcC-----CCCEEEEEecCCcEEEEEcCCCC-CCc-hhhhhhccCchhhhcCCCCeeEEEeCCC-
Q psy12614 534 --SLPRYRKPSTAMAIHP-----TLSTLVTVYSDHRIVEFDLNRKA-FTT-FSRKLETNHPNEWLSRQLPVLGIEFDPQ- 603 (708)
Q Consensus 534 --~~~~~~~~v~~l~~s~-----d~~~l~~~~~dg~i~vwd~~~~~-~~~-~~~~~~~~~~~~~~~~~~~i~~l~~s~~- 603 (708)
....+...|+++++.| .+..+++|.+.|.|.+|...... ... -...... ......+|.+.|+.+.|+|-
T Consensus 657 ~~a~~~~~~aVTAv~~~~~~~~e~~~~vavGle~GeI~l~~~~~~~~~~~~~~~~~~~-~l~~~~~~~~aV~rl~w~p~~ 735 (764)
T KOG1063|consen 657 RFACLKFSLAVTAVAYLPVDHNEKGDVVAVGLEKGEIVLWRRKREHRQVTVGTFNLDT-RLCATIGPDSAVNRLLWRPTC 735 (764)
T ss_pred hhchhccCCceeeEEeeccccccccceEEEEecccEEEEEecccccccccceeeeecc-ccccccChHHhhheeEecccc
Confidence 4567889999999987 23368889999999999966211 000 0000001 11234568889999999974
Q ss_pred -------C--CceEEEEcCeeEEEEecC
Q psy12614 604 -------D--SSLIYLMDDSALCVINKN 622 (708)
Q Consensus 604 -------~--~~l~~~~~d~~i~~wd~~ 622 (708)
. ..|+++++|..++++++.
T Consensus 736 ~~~~~~~~~~l~la~~g~D~~vri~nv~ 763 (764)
T KOG1063|consen 736 SDDWVEDKEWLNLAVGGDDESVRIFNVD 763 (764)
T ss_pred ccccccccceeEEeeecccceeEEeecc
Confidence 2 236999999999999875
|
|
| >KOG0276|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-40 Score=311.19 Aligned_cols=432 Identities=12% Similarity=0.138 Sum_probs=328.4
Q ss_pred eeccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEE
Q psy12614 20 KFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYD 97 (708)
Q Consensus 20 ~~~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd 97 (708)
|.+..|+..|.++.|+|...++.++-.+|.|.|||.++...+. .+.-.. -+|++..|- .+++++|+.|..|+|++
T Consensus 7 rk~~~rSdRVKsVd~HPtePw~la~LynG~V~IWnyetqtmVk-sfeV~~--~PvRa~kfiaRknWiv~GsDD~~IrVfn 83 (794)
T KOG0276|consen 7 RKFQSRSDRVKSVDFHPTEPWILAALYNGDVQIWNYETQTMVK-SFEVSE--VPVRAAKFIARKNWIVTGSDDMQIRVFN 83 (794)
T ss_pred hHhhccCCceeeeecCCCCceEEEeeecCeeEEEecccceeee-eeeecc--cchhhheeeeccceEEEecCCceEEEEe
Confidence 4566689999999999999999999999999999999988876 888777 899999999 89999999999999999
Q ss_pred CCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCC-CCEEEEecCC
Q psy12614 98 MRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSS-GDYLVTGCAA 176 (708)
Q Consensus 98 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d-~~~l~~~~~d 176 (708)
..+++.+..+..|..-|++++.+|...+++++++|-.|++||++.+-. ..+++.+|..-|.+++|.|. .+.+|+++-|
T Consensus 84 ynt~ekV~~FeAH~DyIR~iavHPt~P~vLtsSDDm~iKlW~we~~wa-~~qtfeGH~HyVMqv~fnPkD~ntFaS~sLD 162 (794)
T KOG0276|consen 84 YNTGEKVKTFEAHSDYIRSIAVHPTLPYVLTSSDDMTIKLWDWENEWA-CEQTFEGHEHYVMQVAFNPKDPNTFASASLD 162 (794)
T ss_pred cccceeeEEeeccccceeeeeecCCCCeEEecCCccEEEEeeccCcee-eeeEEcCcceEEEEEEecCCCccceeeeecc
Confidence 999999999999999999999999999999999999999999986533 34899999999999999994 5789999999
Q ss_pred -eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCC---EEEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEE
Q psy12614 177 -AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADF---TIITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTV 252 (708)
Q Consensus 177 -~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~ 252 (708)
+|++|.+....+..++. +|...|+|+.|-+.| .+++|+.|..|++||.++.++++++.+|...|..+.|
T Consensus 163 rTVKVWslgs~~~nfTl~-------gHekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQtk~CV~TLeGHt~Nvs~v~f 235 (794)
T KOG0276|consen 163 RTVKVWSLGSPHPNFTLE-------GHEKGVNCVDYYTGGDKPYLISGADDLTIKVWDYQTKSCVQTLEGHTNNVSFVFF 235 (794)
T ss_pred ccEEEEEcCCCCCceeee-------ccccCcceEEeccCCCcceEEecCCCceEEEeecchHHHHHHhhcccccceEEEe
Confidence 99999998888888777 448999999999988 4999999999999999999999999999999999999
Q ss_pred eCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEEEcCCCeEEE----
Q psy12614 253 SEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSGGLDSYLSL---- 326 (708)
Q Consensus 253 s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~~~d~~i~i---- 326 (708)
.|.-..+++|+.||+++||+..+ -+ ....+...-..+++++.. ++.++.|...|.+.+
T Consensus 236 hp~lpiiisgsEDGTvriWhs~T--------y~--------lE~tLn~gleRvW~I~~~k~~~~i~vG~Deg~i~v~lgr 299 (794)
T KOG0276|consen 236 HPELPIIISGSEDGTVRIWNSKT--------YK--------LEKTLNYGLERVWCIAAHKGDGKIAVGFDEGSVTVKLGR 299 (794)
T ss_pred cCCCcEEEEecCCccEEEecCcc--------ee--------hhhhhhcCCceEEEEeecCCCCeEEEeccCCcEEEEccC
Confidence 99999999999999999999887 32 334455555677777766 555666666665543
Q ss_pred --------------EeCCCCc----eeecC-------------------ccCCCCceEEEEcCCcEEEEEcCCeEEEEEe
Q psy12614 327 --------------SYYPPKT----LVKYP-------------------CTLAQSTPVSLAKDIQHVLLQYTSHLELWSL 369 (708)
Q Consensus 327 --------------w~~~~~~----~~~~~-------------------~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~ 369 (708)
|...+.. +.... ...-.+..++-+|+|++++++.+|.-.||..
T Consensus 300 eeP~vsMd~~gKIiwa~~~ei~~~~~ks~~~~~ev~DgErL~LsvKeLgs~eiyPq~L~hsPNGrfV~VcgdGEyiIyTa 379 (794)
T KOG0276|consen 300 EEPAVSMDSNGKIIWAVHSEIQAVNLKSVGAQKEVTDGERLPLSVKELGSVEIYPQTLAHSPNGRFVVVCGDGEYIIYTA 379 (794)
T ss_pred CCCceeecCCccEEEEcCceeeeeeceeccCcccccCCccccchhhhccccccchHHhccCCCCcEEEEecCccEEEEEe
Confidence 3222111 00000 0011223455666777777776666666542
Q ss_pred cCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEEE-cCCceEEEEEEecCCcceeEEeecCCc
Q psy12614 370 GSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYS-TESCVRLHSLDLDGDKPQISRIKNLPA 448 (708)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~ 448 (708)
-. ......+.-....|++|....++- +++.|+++ ...+ ..+. +..
T Consensus 380 la--------------------------~RnK~fG~~~eFvw~~dsne~avRes~~~vki~--knfk---e~ks---i~~ 425 (794)
T KOG0276|consen 380 LA--------------------------LRNKAFGSGLEFVWAADSNEFAVRESNGNVKIF--KNFK---EHKS---IRP 425 (794)
T ss_pred ee--------------------------hhhcccccceeEEEcCCCCeEEEEecCCceEEE--ecce---eccc---ccc
Confidence 21 111223344556666665555553 36666666 2111 1111 111
Q ss_pred ccccceeEEEEEecCCCeEEEEecCCc-EEEecCCCeEEEEEecCCCCCccCcceEEEEECCCCcEEEEEecCCeEEEEE
Q psy12614 449 PLFKSIFTHVLISADSTLLLAVSLNGP-LYIIDLSSLEIKYCVDPYKSNLMSDVISLVQMSECKQYIVCADRKSHVVIWK 527 (708)
Q Consensus 449 ~~~~~~i~~~~~s~d~~~l~~~~~dg~-i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~ 527 (708)
.. . ...--.|.+|.+.+.+.. +|+++++ ++++.+... ...+.|+.+|.+++.++.+ ..+++.
T Consensus 426 ~~---~---~e~i~gg~Llg~~ss~~~~fydW~~~--~lVrrI~v~--------~k~v~w~d~g~lVai~~d~-Sfyil~ 488 (794)
T KOG0276|consen 426 DM---S---AEGIFGGPLLGVRSSDFLCFYDWESG--ELVRRIEVT--------SKHVYWSDNGELVAIAGDD-SFYILK 488 (794)
T ss_pred cc---c---eeeecCCceEEEEeCCeEEEEEcccc--eEEEEEeec--------cceeEEecCCCEEEEEecC-ceeEEE
Confidence 10 1 223335678888888887 9999888 788888653 3459999999999988755 344544
Q ss_pred CC
Q psy12614 528 NG 529 (708)
Q Consensus 528 ~~ 529 (708)
+.
T Consensus 489 ~n 490 (794)
T KOG0276|consen 489 FN 490 (794)
T ss_pred ec
Confidence 44
|
|
| >KOG0286|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-40 Score=284.24 Aligned_cols=293 Identities=16% Similarity=0.270 Sum_probs=266.1
Q ss_pred CCCCccceeeeeeeeccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEE
Q psy12614 7 KRNTMGTYGVHNIKFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRL 84 (708)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l 84 (708)
+-..+..++++.-|.++||.+.|.++.|++|.++|++++.||.+.|||.-+...++ .++-.. ..|...+|+ |+++
T Consensus 36 ~~~~~~~i~~~~rr~LkGH~~Ki~~~~ws~Dsr~ivSaSqDGklIvWDs~TtnK~h-aipl~s--~WVMtCA~sPSg~~V 112 (343)
T KOG0286|consen 36 RLESVGRIQMRTRRTLKGHLNKIYAMDWSTDSRRIVSASQDGKLIVWDSFTTNKVH-AIPLPS--SWVMTCAYSPSGNFV 112 (343)
T ss_pred ccccceeeeeeeEEEecccccceeeeEecCCcCeEEeeccCCeEEEEEccccccee-EEecCc--eeEEEEEECCCCCeE
Confidence 34556677788889999999999999999999999999999999999999876665 666666 899999999 9999
Q ss_pred EEEcCCCcEEEEECCCC------eEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccE
Q psy12614 85 FSGGLQGFVNEYDMRRL------NIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRI 158 (708)
Q Consensus 85 ~s~~~d~~i~vwd~~~~------~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v 158 (708)
|.|+-|+...||++.+. +..+.+.+|.+-+.|+.|-+|+ .|++++.|.+..+||+++++.+ ..|.+|.+.|
T Consensus 113 AcGGLdN~Csiy~ls~~d~~g~~~v~r~l~gHtgylScC~f~dD~-~ilT~SGD~TCalWDie~g~~~--~~f~GH~gDV 189 (343)
T KOG0286|consen 113 ACGGLDNKCSIYPLSTRDAEGNVRVSRELAGHTGYLSCCRFLDDN-HILTGSGDMTCALWDIETGQQT--QVFHGHTGDV 189 (343)
T ss_pred EecCcCceeEEEecccccccccceeeeeecCccceeEEEEEcCCC-ceEecCCCceEEEEEcccceEE--EEecCCcccE
Confidence 99999999999999865 3556788999999999999855 6889999999999999999998 8999999999
Q ss_pred EEEEECC-CCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCe
Q psy12614 159 LCTAWHS-SGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGV 235 (708)
Q Consensus 159 ~~~~~s~-d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~ 235 (708)
.++.++| +++.+++|+-| ..++||++.+.+.+.+. +|+..|+++.|.|+|. +++|+.|++.++||++..+
T Consensus 190 ~slsl~p~~~ntFvSg~cD~~aklWD~R~~~c~qtF~-------ghesDINsv~ffP~G~afatGSDD~tcRlyDlRaD~ 262 (343)
T KOG0286|consen 190 MSLSLSPSDGNTFVSGGCDKSAKLWDVRSGQCVQTFE-------GHESDINSVRFFPSGDAFATGSDDATCRLYDLRADQ 262 (343)
T ss_pred EEEecCCCCCCeEEecccccceeeeeccCcceeEeec-------ccccccceEEEccCCCeeeecCCCceeEEEeecCCc
Confidence 9999999 99999999999 99999999999999987 5599999999999995 9999999999999999998
Q ss_pred eEEEeec--cccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--
Q psy12614 236 QWSDVKT--HKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH-- 311 (708)
Q Consensus 236 ~~~~~~~--~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~-- 311 (708)
.+..+.. ...+|++++||..|++|++|..|.++.+||.-. ++ ....+.+|...|.++..+
T Consensus 263 ~~a~ys~~~~~~gitSv~FS~SGRlLfagy~d~~c~vWDtlk--------~e--------~vg~L~GHeNRvScl~~s~D 326 (343)
T KOG0286|consen 263 ELAVYSHDSIICGITSVAFSKSGRLLFAGYDDFTCNVWDTLK--------GE--------RVGVLAGHENRVSCLGVSPD 326 (343)
T ss_pred EEeeeccCcccCCceeEEEcccccEEEeeecCCceeEeeccc--------cc--------eEEEeeccCCeeEEEEECCC
Confidence 8887763 345899999999999999999999999999988 76 678899999999999999
Q ss_pred CCEEEEEcCCCeEEEEe
Q psy12614 312 GNRLYSGGLDSYLSLSY 328 (708)
Q Consensus 312 ~~~l~s~~~d~~i~iw~ 328 (708)
|..+++|+.|..++||.
T Consensus 327 G~av~TgSWDs~lriW~ 343 (343)
T KOG0286|consen 327 GMAVATGSWDSTLRIWA 343 (343)
T ss_pred CcEEEecchhHheeecC
Confidence 88999999999999994
|
|
| >KOG1408|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-40 Score=315.05 Aligned_cols=457 Identities=15% Similarity=0.205 Sum_probs=335.9
Q ss_pred eccCCCCcEEEEEEcCCCCEEEEEe--CCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcC--CCcEE
Q psy12614 21 FYAPEPKVINCIACEPKSSRLAVSR--ADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGL--QGFVN 94 (708)
Q Consensus 21 ~~~~h~~~v~~~~~s~~~~~la~~~--~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~--d~~i~ 94 (708)
++..|..+++|+|||++|+|+|+|- ....+++|++.....+. .|..|+ -.|+|++|+ ++++++.+. |-.|.
T Consensus 73 lvnssRk~~t~vAfS~~GryvatGEcG~~pa~kVw~la~h~vVA-EfvdHK--Y~vtcvaFsp~~kyvvSVGsQHDMIVn 149 (1080)
T KOG1408|consen 73 LVNSSRKPLTCVAFSQNGRYVATGECGRTPASKVWSLAFHGVVA-EFVDHK--YNVTCVAFSPGNKYVVSVGSQHDMIVN 149 (1080)
T ss_pred eecccCcceeEEEEcCCCcEEEecccCCCccceeeeeccccchh-hhhhcc--ccceeeeecCCCcEEEeeccccceEEE
Confidence 4667889999999999999999984 56779999999977776 899999 999999999 778876664 44566
Q ss_pred EEECCCCeEeEEEeecCCceEEEEEecCC---------------------------------------------------
Q psy12614 95 EYDMRRLNIKSSTAVTSGTCWCLSVHKKK--------------------------------------------------- 123 (708)
Q Consensus 95 vwd~~~~~~~~~~~~~~~~v~~~~~s~~~--------------------------------------------------- 123 (708)
+||+........ ..-...|.+++|+.||
T Consensus 150 v~dWr~N~~~as-nkiss~Vsav~fsEdgSYfvT~gnrHvk~wyl~~~~KykdpiPl~gRs~~lg~lr~n~f~avaCg~g 228 (1080)
T KOG1408|consen 150 VNDWRVNSSGAS-NKISSVVSAVAFSEDGSYFVTSGNRHVKLWYLQIQSKYKDPIPLPGRSYFLGNLRFNEFLAVACGVG 228 (1080)
T ss_pred hhhhhhcccccc-cccceeEEEEEEccCCceeeeeeeeeEEEEEeeccccccCCccccchhhhccccccchhhhhhhcCc
Confidence 776543211100 0011223333333333
Q ss_pred ------------------------------------------CEEEEEeCCCcEEEEEccCCcEEEEEecc-cc------
Q psy12614 124 ------------------------------------------RLLAAGTEQGHINLFQISDEGLLYEKLLD-RQ------ 154 (708)
Q Consensus 124 ------------------------------------------~~la~~~~d~~i~iwd~~~~~~~~~~~~~-~~------ 154 (708)
+++++|+.+|.|++|+.++-+.. .++. .|
T Consensus 229 icAestfait~qGhLvEFSsRRLLDKWVqcRTTnAnCIcVs~r~I~cgCa~g~vrlFnp~tL~y~--~Tlpr~halg~d~ 306 (1080)
T KOG1408|consen 229 ICAESTFAITAQGHLVEFSSRRLLDKWVQCRTTNANCICVSSRLIACGCAKGMVRLFNPETLDYA--GTLPRSHALGSDT 306 (1080)
T ss_pred ccccceEEEecccceeeechhhhhhhhhhhhccccceeeeecceEEEeeccceeeecCcchhhhc--cccccccccccch
Confidence 45666666666666665543321 1110 00
Q ss_pred -----------------cccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEcc---
Q psy12614 155 -----------------QGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCA--- 213 (708)
Q Consensus 155 -----------------~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--- 213 (708)
-....++.|+|....|.....| .+++||+++-..+.+....- .|...||.+.-.|
T Consensus 307 a~~~q~~~~~s~~~~a~fPD~IA~~Fdet~~klscVYndhSlYvWDvrD~~kvgk~~s~l----yHS~ciW~Ve~~p~nv 382 (1080)
T KOG1408|consen 307 ANLSQPEPKNSESSPAIFPDAIACQFDETTDKLSCVYNDHSLYVWDVRDVNKVGKCSSML----YHSACIWDVENLPCNV 382 (1080)
T ss_pred hhcccccccccccCcccCCceeEEEecCCCceEEEEEcCceEEEEeccccccccceeeee----eccceeeeeccccccc
Confidence 0123467788888899999999 99999998755443322111 4477888775544
Q ss_pred ---------CCEEEEEcCCCcEEEEeCCCCe---eEEE-e---------------------------------eccccCe
Q psy12614 214 ---------DFTIITGDSGGFVRFWDGKTGV---QWSD-V---------------------------------KTHKKDI 247 (708)
Q Consensus 214 ---------~~~l~~~~~dg~i~~wd~~~~~---~~~~-~---------------------------------~~~~~~i 247 (708)
.+.+++++.|++|++||+..+. ..+. + -.....+
T Consensus 383 ~~~~~aclp~~cF~TCSsD~TIRlW~l~~ctnn~vyrRNils~~l~ki~y~d~~~q~~~d~~~~~fdka~~s~~d~r~G~ 462 (1080)
T KOG1408|consen 383 HSPTAACLPRGCFTTCSSDGTIRLWDLAFCTNNQVYRRNILSANLSKIPYEDSTQQIMHDASAGIFDKALVSTCDSRFGF 462 (1080)
T ss_pred cCcccccCCccceeEecCCCcEEEeecccccccceeecccchhhhhcCccccCchhhhhhccCCcccccchhhcCcccce
Confidence 3458999999999999997632 1110 0 1134578
Q ss_pred EEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe-----CCEEEEEcCCC
Q psy12614 248 LALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH-----GNRLYSGGLDS 322 (708)
Q Consensus 248 ~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~-----~~~l~s~~~d~ 322 (708)
.+++.+|+|++|++|+.-|++++|++.. -+ ....+..|...|.++.++ ..+|++++.|.
T Consensus 463 R~~~vSp~gqhLAsGDr~GnlrVy~Lq~--------l~--------~~~~~eAHesEilcLeyS~p~~~~kLLASasrdR 526 (1080)
T KOG1408|consen 463 RALAVSPDGQHLASGDRGGNLRVYDLQE--------LE--------YTCFMEAHESEILCLEYSFPVLTNKLLASASRDR 526 (1080)
T ss_pred EEEEECCCcceecccCccCceEEEEehh--------hh--------hhhheecccceeEEEeecCchhhhHhhhhccCCc
Confidence 9999999999999999999999999988 33 456678999999999999 57889999999
Q ss_pred eEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEEEcCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecC
Q psy12614 323 YLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVN 402 (708)
Q Consensus 323 ~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (708)
.|.++|+...- .+.....+|
T Consensus 527 lIHV~Dv~rny------------------------------------------------------------~l~qtld~H 546 (1080)
T KOG1408|consen 527 LIHVYDVKRNY------------------------------------------------------------DLVQTLDGH 546 (1080)
T ss_pred eEEEEeccccc------------------------------------------------------------chhhhhccc
Confidence 99888874321 234445578
Q ss_pred CCceEEEEeCCCC--cEEEE-EcCCceEEEEEEecCCcceeEEeecCCcccc---cceeEEEEEecCCCeEEEEecCCc-
Q psy12614 403 NATIRCSVVSNDG--KYVAY-STESCVRLHSLDLDGDKPQISRIKNLPAPLF---KSIFTHVLISADSTLLLAVSLNGP- 475 (708)
Q Consensus 403 ~~~i~~~~~s~~g--~~l~~-~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~---~~~i~~~~~s~d~~~l~~~~~dg~- 475 (708)
...|+++.|...| ..+++ |.|..|.+-.... .+.-.+ ++.|.. ...+..++..|..+++++++.|..
T Consensus 547 SssITsvKFa~~gln~~MiscGADksimFr~~qk-~~~g~~-----f~r~t~t~~ktTlYDm~Vdp~~k~v~t~cQDrni 620 (1080)
T KOG1408|consen 547 SSSITSVKFACNGLNRKMISCGADKSIMFRVNQK-ASSGRL-----FPRHTQTLSKTTLYDMAVDPTSKLVVTVCQDRNI 620 (1080)
T ss_pred ccceeEEEEeecCCceEEEeccCchhhheehhcc-ccCcee-----ccccccccccceEEEeeeCCCcceEEEEecccce
Confidence 8999999998777 44444 6687765433331 111111 233322 345666999999999999999999
Q ss_pred -EEEecCCCeEEEEEecCCCCCccCcceEEEEECCCCcEEEEEecCCeEEEEECCceee--ecCCCCCCceEEEEcCCCC
Q psy12614 476 -LYIIDLSSLEIKYCVDPYKSNLMSDVISLVQMSECKQYIVCADRKSHVVIWKNGQHHA--SLPRYRKPSTAMAIHPTLS 552 (708)
Q Consensus 476 -i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~--~~~~~~~~v~~l~~s~d~~ 552 (708)
||++..+ +..+.|+..++| .+....+...|.|.|||+...|.++.++|+-.++| .+.+|...|+.+.|++|.+
T Consensus 621 rif~i~sg--Kq~k~FKgs~~~--eG~lIKv~lDPSgiY~atScsdktl~~~Df~sgEcvA~m~GHsE~VTG~kF~nDCk 696 (1080)
T KOG1408|consen 621 RIFDIESG--KQVKSFKGSRDH--EGDLIKVILDPSGIYLATSCSDKTLCFVDFVSGECVAQMTGHSEAVTGVKFLNDCK 696 (1080)
T ss_pred EEEecccc--ceeeeecccccC--CCceEEEEECCCccEEEEeecCCceEEEEeccchhhhhhcCcchheeeeeecccch
Confidence 7777666 899999998888 88899999999999999999999999999998887 8999999999999999999
Q ss_pred EEEEEecCCcEEEEEcCCCCC
Q psy12614 553 TLVTVYSDHRIVEFDLNRKAF 573 (708)
Q Consensus 553 ~l~~~~~dg~i~vwd~~~~~~ 573 (708)
.|++++.||.|+||.++....
T Consensus 697 HlISvsgDgCIFvW~lp~~mi 717 (1080)
T KOG1408|consen 697 HLISVSGDGCIFVWKLPLTMI 717 (1080)
T ss_pred hheeecCCceEEEEECchhHh
Confidence 999999999999999876443
|
|
| >KOG0292|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-39 Score=314.60 Aligned_cols=518 Identities=14% Similarity=0.173 Sum_probs=371.2
Q ss_pred ccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECC
Q psy12614 22 YAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMR 99 (708)
Q Consensus 22 ~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~ 99 (708)
|...+..|..++|+|...++.++-.+|.|.+||..-+.++. .|..|. ++|+.++|+ +..++|||.|-.|++|+.+
T Consensus 5 fEskSsRvKglsFHP~rPwILtslHsG~IQlWDYRM~tli~-rFdeHd--GpVRgv~FH~~qplFVSGGDDykIkVWnYk 81 (1202)
T KOG0292|consen 5 FESKSSRVKGLSFHPKRPWILTSLHSGVIQLWDYRMGTLID-RFDEHD--GPVRGVDFHPTQPLFVSGGDDYKIKVWNYK 81 (1202)
T ss_pred hhcccccccceecCCCCCEEEEeecCceeeeehhhhhhHHh-hhhccC--CccceeeecCCCCeEEecCCccEEEEEecc
Confidence 34456789999999999999999999999999999999988 899999 999999999 8999999999999999999
Q ss_pred CCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eE
Q psy12614 100 RLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AV 178 (708)
Q Consensus 100 ~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i 178 (708)
+.+++.++.+|-.-|+.+.|++.-.+++++++|.+|+||++.+++++ ..+.+|...|.|..|+|....+++++-| +|
T Consensus 82 ~rrclftL~GHlDYVRt~~FHheyPWIlSASDDQTIrIWNwqsr~~i--avltGHnHYVMcAqFhptEDlIVSaSLDQTV 159 (1202)
T KOG0292|consen 82 TRRCLFTLLGHLDYVRTVFFHHEYPWILSASDDQTIRIWNWQSRKCI--AVLTGHNHYVMCAQFHPTEDLIVSASLDQTV 159 (1202)
T ss_pred cceehhhhccccceeEEeeccCCCceEEEccCCCeEEEEeccCCceE--EEEecCceEEEeeccCCccceEEEecccceE
Confidence 99999999999999999999999999999999999999999999998 8999999999999999999999999999 99
Q ss_pred EEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCE
Q psy12614 179 RVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENY 258 (708)
Q Consensus 179 ~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~ 258 (708)
++||+...+....-. + ++ +.++ .+.. +..-++-..+.-....+.+|...|.-++|.|.-..
T Consensus 160 RVWDisGLRkk~~~p----------g---~~----e~~~-~~~~-~~~dLfg~~DaVVK~VLEGHDRGVNwaAfhpTlpl 220 (1202)
T KOG0292|consen 160 RVWDISGLRKKNKAP----------G---SL----EDQM-RGQQ-GNSDLFGQTDAVVKHVLEGHDRGVNWAAFHPTLPL 220 (1202)
T ss_pred EEEeecchhccCCCC----------C---Cc----hhhh-hccc-cchhhcCCcCeeeeeeecccccccceEEecCCcce
Confidence 999986433222111 1 00 0000 0100 11112211122334568899999999999999999
Q ss_pred EEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEEEcCCCeEEEEeCCCCc-ee
Q psy12614 259 LYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSGGLDSYLSLSYYPPKT-LV 335 (708)
Q Consensus 259 l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~~~-~~ 335 (708)
+++|+.|+.|++|.+.. . .-| ...+.++|.+.|.++-|+ .+++++.|.|++|++||+...+ +.
T Consensus 221 iVSG~DDRqVKlWrmne--------t-----KaW-EvDtcrgH~nnVssvlfhp~q~lIlSnsEDksirVwDm~kRt~v~ 286 (1202)
T KOG0292|consen 221 IVSGADDRQVKLWRMNE--------T-----KAW-EVDTCRGHYNNVSSVLFHPHQDLILSNSEDKSIRVWDMTKRTSVQ 286 (1202)
T ss_pred EEecCCcceeeEEEecc--------c-----cce-eehhhhcccCCcceEEecCccceeEecCCCccEEEEeccccccee
Confidence 99999999999999986 2 345 477889999999999999 6999999999999999999877 44
Q ss_pred ecCccCCCCceEEEEcCCcEEEEEcCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCC
Q psy12614 336 KYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDG 415 (708)
Q Consensus 336 ~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g 415 (708)
.+......-..++..|..++++++.|+.+.+|.++... .+.+++ +
T Consensus 287 tfrrendRFW~laahP~lNLfAAgHDsGm~VFkleREr---------------------------------pa~~v~--~ 331 (1202)
T KOG0292|consen 287 TFRRENDRFWILAAHPELNLFAAGHDSGMIVFKLERER---------------------------------PAYAVN--G 331 (1202)
T ss_pred eeeccCCeEEEEEecCCcceeeeecCCceEEEEEcccC---------------------------------ceEEEc--C
Confidence 44433445578999999999999999999999888533 123333 3
Q ss_pred cEEEEEcCCceEEEEEEecCCcceeEEeecCCcccc-cceeEEEEEecCCCeEEEEe-cCCc---EEEecCCCe--EEEE
Q psy12614 416 KYVAYSTESCVRLHSLDLDGDKPQISRIKNLPAPLF-KSIFTHVLISADSTLLLAVS-LNGP---LYIIDLSSL--EIKY 488 (708)
Q Consensus 416 ~~l~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~s~d~~~l~~~~-~dg~---i~~~~~~~~--~~~~ 488 (708)
..|..-.+..|+-+|+.+.+.. .+.. +..... ..+..++.++|....+..++ .++. ++.+..... ...+
T Consensus 332 n~LfYvkd~~i~~~d~~t~~d~-~v~~---lr~~g~~~~~~~smsYNpae~~vlics~~~n~~y~L~~ipk~~~~~~~~~ 407 (1202)
T KOG0292|consen 332 NGLFYVKDRFIRSYDLRTQKDT-AVAS---LRRPGTLWQPPRSLSYNPAENAVLICSNLDNGEYELVQIPKDSDGVSDGK 407 (1202)
T ss_pred CEEEEEccceEEeeeccccccc-eeEe---ccCCCcccCCcceeeeccccCeEEEEeccCCCeEEEEEecCcccccCCch
Confidence 3455556899999999874333 3333 222211 33556699999766555553 3333 444432210 0001
Q ss_pred EecCCCCCccCcceEEEEECCCCcEEEEEecCCeEEEEECCcee-eecCCCCCCceEEEEcCCCCEEEEEecCCcEEEEE
Q psy12614 489 CVDPYKSNLMSDVISLVQMSECKQYIVCADRKSHVVIWKNGQHH-ASLPRYRKPSTAMAIHPTLSTLVTVYSDHRIVEFD 567 (708)
Q Consensus 489 ~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~-~~~~~~~~~v~~l~~s~d~~~l~~~~~dg~i~vwd 567 (708)
.... ......+ |-..+++.+.--.+..+.+=++.+.. ..++.. ..+..+-+.-+|.+|+. ....|.+||
T Consensus 408 ~~~k------~tG~~a~-fvarNrfavl~k~~~~v~ik~l~N~vtkkl~~~-~~~~~IF~ag~g~lll~--~~~~v~lfd 477 (1202)
T KOG0292|consen 408 DVKK------GTGEGAL-FVARNRFAVLDKSNEQVVIKNLKNKVTKKLLLP-ESTDDIFYAGTGNLLLR--SPDSVTLFD 477 (1202)
T ss_pred hhhc------CCCCceE-EEEecceEEEEecCcceEEecccchhhhcccCc-ccccceeeccCccEEEE--cCCeEEEEE
Confidence 1111 1122222 32233343333335566666665222 222221 34555666666766653 345699999
Q ss_pred cCCCCCCchhhhhhccCchhhhcCCCCeeEEEeCCCCCceEEEEcCeeEEEEecCCCCCcccCccccCCCCCC
Q psy12614 568 LNRKAFTTFSRKLETNHPNEWLSRQLPVLGIEFDPQDSSLIYLMDDSALCVINKNKSLAHADAKIPRLGPKVV 640 (708)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~ 640 (708)
++.++.. .. -...+|..+.||+|+.+++..+ -.+|.+.|...+.-......-|.+++..
T Consensus 478 vQq~~~~-----------~s--i~~s~vkyvvws~dm~~vAll~-Kh~i~i~~kkL~l~~sihEtiriksgaw 536 (1202)
T KOG0292|consen 478 VQQKKKV-----------GS--IKVSKVKYVVWSNDMSRVALLS-KHTITIADKKLELLCSIHETIRIKSGAW 536 (1202)
T ss_pred eecceEE-----------EE--EecCceeEEEEcCccchhhhcc-cceEEEEecchhheecchheeEeeecee
Confidence 9987754 11 2345789999999999888776 4568888877665433333333444443
|
|
| >KOG0279|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-39 Score=274.77 Aligned_cols=293 Identities=15% Similarity=0.186 Sum_probs=247.4
Q ss_pred eEEEEEecCCCCCcEEEEEEe---CCEEEEEcCCCcEEEEECCC-----CeEeEEEeecCCceEEEEEecCCCEEEEEeC
Q psy12614 60 HVDRVFIGDPLSNSIECLTWF---NDRLFSGGLQGFVNEYDMRR-----LNIKSSTAVTSGTCWCLSVHKKKRLLAAGTE 131 (708)
Q Consensus 60 ~~~~~~~~h~~~~~v~~l~~~---~~~l~s~~~d~~i~vwd~~~-----~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~ 131 (708)
.+..++++|. +.|++++.. .+.+++++.|.++.+|++.. |.+++.+.+|+..|..++.++||++.++++.
T Consensus 6 ~l~~tl~gh~--d~Vt~la~~~~~~~~l~sasrDk~ii~W~L~~dd~~~G~~~r~~~GHsH~v~dv~~s~dg~~alS~sw 83 (315)
T KOG0279|consen 6 VLRGTLEGHT--DWVTALAIKIKNSDILVSASRDKTIIVWKLTSDDIKYGVPVRRLTGHSHFVSDVVLSSDGNFALSASW 83 (315)
T ss_pred eeeeeecCCC--ceEEEEEeecCCCceEEEcccceEEEEEEeccCccccCceeeeeeccceEecceEEccCCceEEeccc
Confidence 3455899999 999999998 68899999999999998654 7789999999999999999999999999999
Q ss_pred CCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEE
Q psy12614 132 QGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVA 210 (708)
Q Consensus 132 d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 210 (708)
|+.+++||+.+++.. +.|.+|...|.+++|+||.+.+++|++| +|++|+.. |.+..++... .+...|.|+.
T Consensus 84 D~~lrlWDl~~g~~t--~~f~GH~~dVlsva~s~dn~qivSGSrDkTiklwnt~-g~ck~t~~~~-----~~~~WVscvr 155 (315)
T KOG0279|consen 84 DGTLRLWDLATGEST--RRFVGHTKDVLSVAFSTDNRQIVSGSRDKTIKLWNTL-GVCKYTIHED-----SHREWVSCVR 155 (315)
T ss_pred cceEEEEEecCCcEE--EEEEecCCceEEEEecCCCceeecCCCcceeeeeeec-ccEEEEEecC-----CCcCcEEEEE
Confidence 999999999999776 8899999999999999999999999999 99999975 4555555443 3378999999
Q ss_pred EccCC---EEEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCC
Q psy12614 211 FCADF---TIITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQ 287 (708)
Q Consensus 211 ~~~~~---~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~ 287 (708)
|+|+. .+++++.|++|++||+++.+....+.+|.+.++.+++||||...++|+.||.+.+||++. ++
T Consensus 156 fsP~~~~p~Ivs~s~DktvKvWnl~~~~l~~~~~gh~~~v~t~~vSpDGslcasGgkdg~~~LwdL~~--------~k-- 225 (315)
T KOG0279|consen 156 FSPNESNPIIVSASWDKTVKVWNLRNCQLRTTFIGHSGYVNTVTVSPDGSLCASGGKDGEAMLWDLNE--------GK-- 225 (315)
T ss_pred EcCCCCCcEEEEccCCceEEEEccCCcchhhccccccccEEEEEECCCCCEEecCCCCceEEEEEccC--------Cc--
Confidence 99985 499999999999999999999999999999999999999999999999999999999999 75
Q ss_pred CCcceEEeEEEeccccceEEEEEe-CCEEEEEcCCCeEEEEeCCCCcee-ecCccCCCCceEEEEcCCcEEEEEcCCeEE
Q psy12614 288 GSSVWVRSVNRVIHEGDVKSLALH-GNRLYSGGLDSYLSLSYYPPKTLV-KYPCTLAQSTPVSLAKDIQHVLLQYTSHLE 365 (708)
Q Consensus 288 ~~~~~~~~~~~~~~~~~v~~l~~~-~~~l~s~~~d~~i~iw~~~~~~~~-~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~ 365 (708)
. .....|...|.+++|+ ..+.+.+..+..|+|||++++.+. .+. ++
T Consensus 226 ------~-lysl~a~~~v~sl~fspnrywL~~at~~sIkIwdl~~~~~v~~l~------------~d------------- 273 (315)
T KOG0279|consen 226 ------N-LYSLEAFDIVNSLCFSPNRYWLCAATATSIKIWDLESKAVVEELK------------LD------------- 273 (315)
T ss_pred ------e-eEeccCCCeEeeEEecCCceeEeeccCCceEEEeccchhhhhhcc------------cc-------------
Confidence 3 3445778899999999 667777777888999999776521 111 00
Q ss_pred EEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEEEc-CCceEEEEEE
Q psy12614 366 LWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYST-ESCVRLHSLD 432 (708)
Q Consensus 366 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~-d~~i~i~~~~ 432 (708)
. .-...........+++|++||+.|..|. |+.|++|.+.
T Consensus 274 -------~---------------------~g~s~~~~~~~clslaws~dG~tLf~g~td~~irv~qv~ 313 (315)
T KOG0279|consen 274 -------G---------------------IGPSSKAGDPICLSLAWSADGQTLFAGYTDNVIRVWQVA 313 (315)
T ss_pred -------c---------------------cccccccCCcEEEEEEEcCCCcEEEeeecCCcEEEEEee
Confidence 0 0000112233456789999999999987 9999999886
|
|
| >KOG0286|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-38 Score=275.20 Aligned_cols=287 Identities=18% Similarity=0.294 Sum_probs=250.0
Q ss_pred eEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEE
Q psy12614 102 NIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRV 180 (708)
Q Consensus 102 ~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~i 180 (708)
+..+++++|.+.|.++.|++|.+++++++.||.+.|||.-+...+ ..++-...+|..++|+|.|+++|.|+-| ...|
T Consensus 46 ~~rr~LkGH~~Ki~~~~ws~Dsr~ivSaSqDGklIvWDs~TtnK~--haipl~s~WVMtCA~sPSg~~VAcGGLdN~Csi 123 (343)
T KOG0286|consen 46 RTRRTLKGHLNKIYAMDWSTDSRRIVSASQDGKLIVWDSFTTNKV--HAIPLPSSWVMTCAYSPSGNFVACGGLDNKCSI 123 (343)
T ss_pred eeEEEecccccceeeeEecCCcCeEEeeccCCeEEEEEcccccce--eEEecCceeEEEEEECCCCCeEEecCcCceeEE
Confidence 345789999999999999999999999999999999998877766 4555567899999999999999999999 9999
Q ss_pred EEcCCC--ceEEEEEecccCCCCCceeEEEEEEccCCEEEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeC-CCC
Q psy12614 181 WDIHKG--HAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSE-DEN 257 (708)
Q Consensus 181 wd~~~~--~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~-~~~ 257 (708)
|++.+. +........-. +|.+.+.++.|.+|+++++++.|.+..+||+++|+.+..+.+|.+.|.++.++| +++
T Consensus 124 y~ls~~d~~g~~~v~r~l~---gHtgylScC~f~dD~~ilT~SGD~TCalWDie~g~~~~~f~GH~gDV~slsl~p~~~n 200 (343)
T KOG0286|consen 124 YPLSTRDAEGNVRVSRELA---GHTGYLSCCRFLDDNHILTGSGDMTCALWDIETGQQTQVFHGHTGDVMSLSLSPSDGN 200 (343)
T ss_pred Eecccccccccceeeeeec---CccceeEEEEEcCCCceEecCCCceEEEEEcccceEEEEecCCcccEEEEecCCCCCC
Confidence 999854 21111111111 559999999999999999999999999999999999999999999999999999 999
Q ss_pred EEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEEEcCCCeEEEEeCCCCc-e
Q psy12614 258 YLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSGGLDSYLSLSYYPPKT-L 334 (708)
Q Consensus 258 ~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~~~-~ 334 (708)
.+++|+-|+..++||++. +. ..+.+.+|...|.++.|. |.-+++|+.|++.++||++... +
T Consensus 201 tFvSg~cD~~aklWD~R~--------~~--------c~qtF~ghesDINsv~ffP~G~afatGSDD~tcRlyDlRaD~~~ 264 (343)
T KOG0286|consen 201 TFVSGGCDKSAKLWDVRS--------GQ--------CVQTFEGHESDINSVRFFPSGDAFATGSDDATCRLYDLRADQEL 264 (343)
T ss_pred eEEecccccceeeeeccC--------cc--------eeEeecccccccceEEEccCCCeeeecCCCceeEEEeecCCcEE
Confidence 999999999999999999 76 789999999999999999 9999999999999999999865 3
Q ss_pred eecC--ccCCCCceEEEEcCCcEEEEE-cCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEe
Q psy12614 335 VKYP--CTLAQSTPVSLAKDIQHVLLQ-YTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVV 411 (708)
Q Consensus 335 ~~~~--~~~~~~~~~~~s~~~~~l~~~-~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 411 (708)
..+. ....+..+++||..|+++.++ .|..+.+||.-.++ ......+|.++|+++..
T Consensus 265 a~ys~~~~~~gitSv~FS~SGRlLfagy~d~~c~vWDtlk~e---------------------~vg~L~GHeNRvScl~~ 323 (343)
T KOG0286|consen 265 AVYSHDSIICGITSVAFSKSGRLLFAGYDDFTCNVWDTLKGE---------------------RVGVLAGHENRVSCLGV 323 (343)
T ss_pred eeeccCcccCCceeEEEcccccEEEeeecCCceeEeeccccc---------------------eEEEeeccCCeeEEEEE
Confidence 3332 234466899999999999995 78899999988765 44555699999999999
Q ss_pred CCCCcEEEEEc-CCceEEEE
Q psy12614 412 SNDGKYVAYST-ESCVRLHS 430 (708)
Q Consensus 412 s~~g~~l~~~~-d~~i~i~~ 430 (708)
+|||.-+++|+ |.+++||.
T Consensus 324 s~DG~av~TgSWDs~lriW~ 343 (343)
T KOG0286|consen 324 SPDGMAVATGSWDSTLRIWA 343 (343)
T ss_pred CCCCcEEEecchhHheeecC
Confidence 99999999977 99999994
|
|
| >KOG0279|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-38 Score=272.83 Aligned_cols=290 Identities=14% Similarity=0.200 Sum_probs=240.5
Q ss_pred eeccCCCCcEEEEEEcCC-CCEEEEEeCCCcEEEEeCCC-----CCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCC
Q psy12614 20 KFYAPEPKVINCIACEPK-SSRLAVSRADQSIEIWDISE-----TPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQG 91 (708)
Q Consensus 20 ~~~~~h~~~v~~~~~s~~-~~~la~~~~dg~v~iwd~~~-----~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~ 91 (708)
-.+.+|++.|+.++..+. ...|.+++.|.++.+|++.. |..+ +.+.||. ..|..++.+ |++.++++.|+
T Consensus 9 ~tl~gh~d~Vt~la~~~~~~~~l~sasrDk~ii~W~L~~dd~~~G~~~-r~~~GHs--H~v~dv~~s~dg~~alS~swD~ 85 (315)
T KOG0279|consen 9 GTLEGHTDWVTALAIKIKNSDILVSASRDKTIIVWKLTSDDIKYGVPV-RRLTGHS--HFVSDVVLSSDGNFALSASWDG 85 (315)
T ss_pred eeecCCCceEEEEEeecCCCceEEEcccceEEEEEEeccCccccCcee-eeeeccc--eEecceEEccCCceEEeccccc
Confidence 378999999999999987 46788899999999999875 4444 4999999 999999999 99999999999
Q ss_pred cEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCC--CCE
Q psy12614 92 FVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSS--GDY 169 (708)
Q Consensus 92 ~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d--~~~ 169 (708)
++++||+.+++..+.|.+|...|.+++|++|.+.+++|+.|.+|++|+..++... ...-..+.+.|.++.|+|+ ..+
T Consensus 86 ~lrlWDl~~g~~t~~f~GH~~dVlsva~s~dn~qivSGSrDkTiklwnt~g~ck~-t~~~~~~~~WVscvrfsP~~~~p~ 164 (315)
T KOG0279|consen 86 TLRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSGSRDKTIKLWNTLGVCKY-TIHEDSHREWVSCVRFSPNESNPI 164 (315)
T ss_pred eEEEEEecCCcEEEEEEecCCceEEEEecCCCceeecCCCcceeeeeeecccEEE-EEecCCCcCcEEEEEEcCCCCCcE
Confidence 9999999999999999999999999999999999999999999999998866443 2333334889999999998 789
Q ss_pred EEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCeeEEEeeccccCe
Q psy12614 170 LVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDVKTHKKDI 247 (708)
Q Consensus 170 l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i 247 (708)
|++++.| +|++||+++.+....+. +|...++.++++|||. .++|+.||.+.+||++.++.+..+. |...|
T Consensus 165 Ivs~s~DktvKvWnl~~~~l~~~~~-------gh~~~v~t~~vSpDGslcasGgkdg~~~LwdL~~~k~lysl~-a~~~v 236 (315)
T KOG0279|consen 165 IVSASWDKTVKVWNLRNCQLRTTFI-------GHSGYVNTVTVSPDGSLCASGGKDGEAMLWDLNEGKNLYSLE-AFDIV 236 (315)
T ss_pred EEEccCCceEEEEccCCcchhhccc-------cccccEEEEEECCCCCEEecCCCCceEEEEEccCCceeEecc-CCCeE
Confidence 9999999 99999999888777665 4589999999999996 7899999999999999999988886 78999
Q ss_pred EEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeE-EEeccccceEEEEEe--CCEEEEEcCCCeE
Q psy12614 248 LALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSV-NRVIHEGDVKSLALH--GNRLYSGGLDSYL 324 (708)
Q Consensus 248 ~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~v~~l~~~--~~~l~s~~~d~~i 324 (708)
.+++|+|+.-.|+.+ .+..|+|||+.+ +......+..... ..........+++|+ |..|+.|-.|+.|
T Consensus 237 ~sl~fspnrywL~~a-t~~sIkIwdl~~--------~~~v~~l~~d~~g~s~~~~~~~clslaws~dG~tLf~g~td~~i 307 (315)
T KOG0279|consen 237 NSLCFSPNRYWLCAA-TATSIKIWDLES--------KAVVEELKLDGIGPSSKAGDPICLSLAWSADGQTLFAGYTDNVI 307 (315)
T ss_pred eeEEecCCceeEeec-cCCceEEEeccc--------hhhhhhccccccccccccCCcEEEEEEEcCCCcEEEeeecCCcE
Confidence 999999997655554 456799999998 3210000000000 111112334567787 9999999999999
Q ss_pred EEEeCC
Q psy12614 325 SLSYYP 330 (708)
Q Consensus 325 ~iw~~~ 330 (708)
++|.+.
T Consensus 308 rv~qv~ 313 (315)
T KOG0279|consen 308 RVWQVA 313 (315)
T ss_pred EEEEee
Confidence 999874
|
|
| >KOG0315|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-38 Score=268.73 Aligned_cols=289 Identities=15% Similarity=0.215 Sum_probs=243.1
Q ss_pred EEEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEe
Q psy12614 216 TIITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRS 295 (708)
Q Consensus 216 ~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~ 295 (708)
.|++++.|-+|++|...+|.+.++++...+.|..+.+.|+++.|++++. ..|++||+++ ++ ..+.
T Consensus 12 iLvsA~YDhTIRfWqa~tG~C~rTiqh~dsqVNrLeiTpdk~~LAaa~~-qhvRlyD~~S--------~n------p~Pv 76 (311)
T KOG0315|consen 12 ILVSAGYDHTIRFWQALTGICSRTIQHPDSQVNRLEITPDKKDLAAAGN-QHVRLYDLNS--------NN------PNPV 76 (311)
T ss_pred EEEeccCcceeeeeehhcCeEEEEEecCccceeeEEEcCCcchhhhccC-CeeEEEEccC--------CC------CCce
Confidence 3889999999999999999999999988899999999999999998885 5899999998 53 1257
Q ss_pred EEEeccccceEEEEEe--CCEEEEEcCCCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEEEcCCeEEEEEecCCC
Q psy12614 296 VNRVIHEGDVKSLALH--GNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQ 373 (708)
Q Consensus 296 ~~~~~~~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~ 373 (708)
..+.+|+..|+++.|. |+++++|+.||+++|||++.....+..
T Consensus 77 ~t~e~h~kNVtaVgF~~dgrWMyTgseDgt~kIWdlR~~~~qR~~----------------------------------- 121 (311)
T KOG0315|consen 77 ATFEGHTKNVTAVGFQCDGRWMYTGSEDGTVKIWDLRSLSCQRNY----------------------------------- 121 (311)
T ss_pred eEEeccCCceEEEEEeecCeEEEecCCCceEEEEeccCcccchhc-----------------------------------
Confidence 8899999999999999 999999999999999999764322222
Q ss_pred CCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEEEc-CCceEEEEEEecCCcceeEEeecCCccccc
Q psy12614 374 STDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYST-ESCVRLHSLDLDGDKPQISRIKNLPAPLFK 452 (708)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~-d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~ 452 (708)
.+..+|+++.++|+..-|++|+ +|.|++||+....+...+ +|+..
T Consensus 122 ---------------------------~~~spVn~vvlhpnQteLis~dqsg~irvWDl~~~~c~~~l-----iPe~~-- 167 (311)
T KOG0315|consen 122 ---------------------------QHNSPVNTVVLHPNQTELISGDQSGNIRVWDLGENSCTHEL-----IPEDD-- 167 (311)
T ss_pred ---------------------------cCCCCcceEEecCCcceEEeecCCCcEEEEEccCCcccccc-----CCCCC--
Confidence 4568899999999999999987 999999999874333222 44443
Q ss_pred ceeEEEEEecCCCeEEEEecCCc--EEEecCCC-eEEEEEecCCCCCccCcceEEEEECCCCcEEEEEecCCeEEEEECC
Q psy12614 453 SIFTHVLISADSTLLLAVSLNGP--LYIIDLSS-LEIKYCVDPYKSNLMSDVISLVQMSECKQYIVCADRKSHVVIWKNG 529 (708)
Q Consensus 453 ~~i~~~~~s~d~~~l~~~~~dg~--i~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~ 529 (708)
..|+++...|||++|+.+...|+ +|++-... ...+..+...+.| ...+..+.+|||+++||+++.|.+++||+.+
T Consensus 168 ~~i~sl~v~~dgsml~a~nnkG~cyvW~l~~~~~~s~l~P~~k~~ah--~~~il~C~lSPd~k~lat~ssdktv~iwn~~ 245 (311)
T KOG0315|consen 168 TSIQSLTVMPDGSMLAAANNKGNCYVWRLLNHQTASELEPVHKFQAH--NGHILRCLLSPDVKYLATCSSDKTVKIWNTD 245 (311)
T ss_pred cceeeEEEcCCCcEEEEecCCccEEEEEccCCCccccceEhhheecc--cceEEEEEECCCCcEEEeecCCceEEEEecC
Confidence 47888999999999999999999 89886542 1233333444455 7789999999999999999999999999999
Q ss_pred ---ceeeecCCCCCCceEEEEcCCCCEEEEEecCCcEEEEEcCCCCCCchhhhhhccCchhhhcCCCCeeEEEeC
Q psy12614 530 ---QHHASLPRYRKPSTAMAIHPTLSTLVTVYSDHRIVEFDLNRKAFTTFSRKLETNHPNEWLSRQLPVLGIEFD 601 (708)
Q Consensus 530 ---~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s 601 (708)
+.+..+.+|+..+...+||.||++|++++.|+.+++|+++.++.. +.+.+|.....+++..
T Consensus 246 ~~~kle~~l~gh~rWvWdc~FS~dg~YlvTassd~~~rlW~~~~~k~v-----------~qy~gh~K~~vc~~ln 309 (311)
T KOG0315|consen 246 DFFKLELVLTGHQRWVWDCAFSADGEYLVTASSDHTARLWDLSAGKEV-----------RQYQGHHKAAVCVALN 309 (311)
T ss_pred CceeeEEEeecCCceEEeeeeccCccEEEecCCCCceeecccccCcee-----------eecCCcccccEEEEee
Confidence 556699999999999999999999999999999999999999866 5677888777766643
|
|
| >KOG0296|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-38 Score=280.47 Aligned_cols=327 Identities=16% Similarity=0.243 Sum_probs=285.2
Q ss_pred eeeeeccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEE
Q psy12614 17 HNIKFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVN 94 (708)
Q Consensus 17 ~~~~~~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~ 94 (708)
.....|..|.+.|.+++.+|+.+++|+|+.|..-.||++.++..+. .+.+|+ .+|+++.|+ |.+||+|+-+|.|+
T Consensus 55 dS~~tF~~H~~svFavsl~P~~~l~aTGGgDD~AflW~~~~ge~~~-eltgHK--DSVt~~~FshdgtlLATGdmsG~v~ 131 (399)
T KOG0296|consen 55 DSLVTFDKHTDSVFAVSLHPNNNLVATGGGDDLAFLWDISTGEFAG-ELTGHK--DSVTCCSFSHDGTLLATGDMSGKVL 131 (399)
T ss_pred cceeehhhcCCceEEEEeCCCCceEEecCCCceEEEEEccCCccee-EecCCC--CceEEEEEccCceEEEecCCCccEE
Confidence 4566789999999999999999999999999999999999999776 999999 999999999 99999999999999
Q ss_pred EEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEec
Q psy12614 95 EYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGC 174 (708)
Q Consensus 95 vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~ 174 (708)
||...++.....+...-..+.=+.|+|-+..|++|+.||.+.+|.+.++... +.+.+|..++++=.|.|||+.++++.
T Consensus 132 v~~~stg~~~~~~~~e~~dieWl~WHp~a~illAG~~DGsvWmw~ip~~~~~--kv~~Gh~~~ct~G~f~pdGKr~~tgy 209 (399)
T KOG0296|consen 132 VFKVSTGGEQWKLDQEVEDIEWLKWHPRAHILLAGSTDGSVWMWQIPSQALC--KVMSGHNSPCTCGEFIPDGKRILTGY 209 (399)
T ss_pred EEEcccCceEEEeecccCceEEEEecccccEEEeecCCCcEEEEECCCccee--eEecCCCCCcccccccCCCceEEEEe
Confidence 9999999999988866678888999999999999999999999999986554 78999999999999999999999999
Q ss_pred CC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCeeEEEee--------ccc
Q psy12614 175 AA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDVK--------THK 244 (708)
Q Consensus 175 ~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~~--------~~~ 244 (708)
.| +|++||+.++.++.++.... .....++.++.++. ++.|..++.+++-+..+|+.+.... .+.
T Consensus 210 ~dgti~~Wn~ktg~p~~~~~~~e------~~~~~~~~~~~~~~~~~~g~~e~~~~~~~~~sgKVv~~~n~~~~~l~~~~e 283 (399)
T KOG0296|consen 210 DDGTIIVWNPKTGQPLHKITQAE------GLELPCISLNLAGSTLTKGNSEGVACGVNNGSGKVVNCNNGTVPELKPSQE 283 (399)
T ss_pred cCceEEEEecCCCceeEEecccc------cCcCCccccccccceeEeccCCccEEEEccccceEEEecCCCCccccccch
Confidence 99 99999999999999887543 45677888888885 8899999999999999998877765 344
Q ss_pred cCeEEEE---EeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe-CCEEEEEcC
Q psy12614 245 KDILALT---VSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH-GNRLYSGGL 320 (708)
Q Consensus 245 ~~i~~~~---~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~-~~~l~s~~~ 320 (708)
..+.++. ++..-.+.|+|+.||+|.|||+.. . ..+..-.|...|..+.|. ..+|++++.
T Consensus 284 ~~~esve~~~~ss~lpL~A~G~vdG~i~iyD~a~--------~---------~~R~~c~he~~V~~l~w~~t~~l~t~c~ 346 (399)
T KOG0296|consen 284 ELDESVESIPSSSKLPLAACGSVDGTIAIYDLAA--------S---------TLRHICEHEDGVTKLKWLNTDYLLTACA 346 (399)
T ss_pred hhhhhhhhcccccccchhhcccccceEEEEeccc--------c---------hhheeccCCCceEEEEEcCcchheeecc
Confidence 4444444 455567889999999999999987 3 345556788999999999 599999999
Q ss_pred CCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEEEcCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEe
Q psy12614 321 DSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSA 400 (708)
Q Consensus 321 d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (708)
+|.|+.||.+++ ++.....
T Consensus 347 ~g~v~~wDaRtG-------------------------------------------------------------~l~~~y~ 365 (399)
T KOG0296|consen 347 NGKVRQWDARTG-------------------------------------------------------------QLKFTYT 365 (399)
T ss_pred CceEEeeecccc-------------------------------------------------------------ceEEEEe
Confidence 999999988665 3445556
Q ss_pred cCCCceEEEEeCCCCcEEEE-EcCCceEEEEEE
Q psy12614 401 VNNATIRCSVVSNDGKYVAY-STESCVRLHSLD 432 (708)
Q Consensus 401 ~~~~~i~~~~~s~~g~~l~~-~~d~~i~i~~~~ 432 (708)
+|...|.+++++|+++++++ +.|++.+||+++
T Consensus 366 GH~~~Il~f~ls~~~~~vvT~s~D~~a~VF~v~ 398 (399)
T KOG0296|consen 366 GHQMGILDFALSPQKRLVVTVSDDNTALVFEVP 398 (399)
T ss_pred cCchheeEEEEcCCCcEEEEecCCCeEEEEecC
Confidence 88999999999999999998 559999998764
|
|
| >KOG0285|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-39 Score=283.37 Aligned_cols=293 Identities=16% Similarity=0.306 Sum_probs=258.6
Q ss_pred eeeeccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEE
Q psy12614 18 NIKFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNE 95 (708)
Q Consensus 18 ~~~~~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~v 95 (708)
.-|.+.+|.++|.|+++.|-..++++|+.|++|+|||+.+|+... ++.||. ..|..++++ ..||++++.|+.|+.
T Consensus 143 l~rVi~gHlgWVr~vavdP~n~wf~tgs~DrtikIwDlatg~Lkl-tltGhi--~~vr~vavS~rHpYlFs~gedk~VKC 219 (460)
T KOG0285|consen 143 LYRVISGHLGWVRSVAVDPGNEWFATGSADRTIKIWDLATGQLKL-TLTGHI--ETVRGVAVSKRHPYLFSAGEDKQVKC 219 (460)
T ss_pred ehhhhhhccceEEEEeeCCCceeEEecCCCceeEEEEcccCeEEE-eecchh--heeeeeeecccCceEEEecCCCeeEE
Confidence 345899999999999999999999999999999999999999876 999999 999999999 899999999999999
Q ss_pred EECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecC
Q psy12614 96 YDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCA 175 (708)
Q Consensus 96 wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~ 175 (708)
||++..+.++.+.+|-..|.|++.+|.-..|++|+.|.++++||+++...+ ..+.+|..+|..+.+.|-...+++|+.
T Consensus 220 wDLe~nkvIR~YhGHlS~V~~L~lhPTldvl~t~grDst~RvWDiRtr~~V--~~l~GH~~~V~~V~~~~~dpqvit~S~ 297 (460)
T KOG0285|consen 220 WDLEYNKVIRHYHGHLSGVYCLDLHPTLDVLVTGGRDSTIRVWDIRTRASV--HVLSGHTNPVASVMCQPTDPQVITGSH 297 (460)
T ss_pred EechhhhhHHHhccccceeEEEeccccceeEEecCCcceEEEeeecccceE--EEecCCCCcceeEEeecCCCceEEecC
Confidence 999999999999999999999999999999999999999999999999887 789999999999999999999999999
Q ss_pred C-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEe
Q psy12614 176 A-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVS 253 (708)
Q Consensus 176 d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s 253 (708)
| +|++||+..|+....+..+ ...+.+++.+|... +++++.| .|+-|++..|..+..+.+|..-|.+++.+
T Consensus 298 D~tvrlWDl~agkt~~tlt~h-------kksvral~lhP~e~~fASas~d-nik~w~~p~g~f~~nlsgh~~iintl~~n 369 (460)
T KOG0285|consen 298 DSTVRLWDLRAGKTMITLTHH-------KKSVRALCLHPKENLFASASPD-NIKQWKLPEGEFLQNLSGHNAIINTLSVN 369 (460)
T ss_pred CceEEEeeeccCceeEeeecc-------cceeeEEecCCchhhhhccCCc-cceeccCCccchhhccccccceeeeeeec
Confidence 9 9999999999998888743 88999999999886 5666554 69999999999999999999999999999
Q ss_pred CCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEEEcCCCeEEEEeCCC
Q psy12614 254 EDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSGGLDSYLSLSYYPP 331 (708)
Q Consensus 254 ~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~ 331 (708)
.|+ ++++|+.+|.|.+||.++ |...+..+-+...--...+..|.+.+|. +..|++|..|.+|++|.-+.
T Consensus 370 sD~-v~~~G~dng~~~fwdwks--------g~nyQ~~~t~vqpGSl~sEagI~as~fDktg~rlit~eadKtIk~~keDe 440 (460)
T KOG0285|consen 370 SDG-VLVSGGDNGSIMFWDWKS--------GHNYQRGQTIVQPGSLESEAGIFASCFDKTGSRLITGEADKTIKMYKEDE 440 (460)
T ss_pred cCc-eEEEcCCceEEEEEecCc--------CcccccccccccCCccccccceeEEeecccCceEEeccCCcceEEEeccc
Confidence 988 888999999999999998 5311111000000011234568888998 99999999999999997655
Q ss_pred C
Q psy12614 332 K 332 (708)
Q Consensus 332 ~ 332 (708)
.
T Consensus 441 ~ 441 (460)
T KOG0285|consen 441 H 441 (460)
T ss_pred c
Confidence 4
|
|
| >KOG0276|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-37 Score=290.97 Aligned_cols=467 Identities=15% Similarity=0.164 Sum_probs=343.0
Q ss_pred EEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEcc
Q psy12614 64 VFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQIS 141 (708)
Q Consensus 64 ~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~ 141 (708)
.+..+. ..|.++.|+ ..+++++-.+|.|.|||.++...++.+....-+|++..|-+..+++++|++|..|++|+..
T Consensus 8 k~~~rS--dRVKsVd~HPtePw~la~LynG~V~IWnyetqtmVksfeV~~~PvRa~kfiaRknWiv~GsDD~~IrVfnyn 85 (794)
T KOG0276|consen 8 KFQSRS--DRVKSVDFHPTEPWILAALYNGDVQIWNYETQTMVKSFEVSEVPVRAAKFIARKNWIVTGSDDMQIRVFNYN 85 (794)
T ss_pred HhhccC--CceeeeecCCCCceEEEeeecCeeEEEecccceeeeeeeecccchhhheeeeccceEEEecCCceEEEEecc
Confidence 445566 899999999 8999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCC--EEE
Q psy12614 142 DEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADF--TII 218 (708)
Q Consensus 142 ~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~l~ 218 (708)
+++.+ ..|..|.+-|.+++.+|...++++++.| .|++||++.+-....... +|+..|.+++|.|.. +++
T Consensus 86 t~ekV--~~FeAH~DyIR~iavHPt~P~vLtsSDDm~iKlW~we~~wa~~qtfe------GH~HyVMqv~fnPkD~ntFa 157 (794)
T KOG0276|consen 86 TGEKV--KTFEAHSDYIRSIAVHPTLPYVLTSSDDMTIKLWDWENEWACEQTFE------GHEHYVMQVAFNPKDPNTFA 157 (794)
T ss_pred cceee--EEeeccccceeeeeecCCCCeEEecCCccEEEEeeccCceeeeeEEc------CcceEEEEEEecCCCcccee
Confidence 99988 8999999999999999999999999999 999999986543333322 559999999999966 599
Q ss_pred EEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCC--CEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeE
Q psy12614 219 TGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDE--NYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSV 296 (708)
Q Consensus 219 ~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~--~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~ 296 (708)
+++-|++|++|.+.+..+..++.+|...|.|+.|-+.| .+|++|+.|..+++||.++ .. ...
T Consensus 158 S~sLDrTVKVWslgs~~~nfTl~gHekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQt--------k~--------CV~ 221 (794)
T KOG0276|consen 158 SASLDRTVKVWSLGSPHPNFTLEGHEKGVNCVDYYTGGDKPYLISGADDLTIKVWDYQT--------KS--------CVQ 221 (794)
T ss_pred eeeccccEEEEEcCCCCCceeeeccccCcceEEeccCCCcceEEecCCCceEEEeecch--------HH--------HHH
Confidence 99999999999999999999999999999999998755 7999999999999999998 44 677
Q ss_pred EEeccccceEEEEEe--CCEEEEEcCCCeEEEEeCCCCceeecC-ccCCCCceEEEEcCCcEEEEEcCCeEEEEEecCCC
Q psy12614 297 NRVIHEGDVKSLALH--GNRLYSGGLDSYLSLSYYPPKTLVKYP-CTLAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQ 373 (708)
Q Consensus 297 ~~~~~~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~~~~~~~~-~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~ 373 (708)
++.+|...|..+.|+ -..+++|+.||+++||+..+..+.... -......+++-.+.++.++.+.|....+..+...+
T Consensus 222 TLeGHt~Nvs~v~fhp~lpiiisgsEDGTvriWhs~Ty~lE~tLn~gleRvW~I~~~k~~~~i~vG~Deg~i~v~lgree 301 (794)
T KOG0276|consen 222 TLEGHTNNVSFVFFHPELPIIISGSEDGTVRIWNSKTYKLEKTLNYGLERVWCIAAHKGDGKIAVGFDEGSVTVKLGREE 301 (794)
T ss_pred HhhcccccceEEEecCCCcEEEEecCCccEEEecCcceehhhhhhcCCceEEEEeecCCCCeEEEeccCCcEEEEccCCC
Confidence 889999999999999 678999999999999999887654433 22445567777788888888887776666666544
Q ss_pred CCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEEEc--CCceEEEEEEec-----CCcceeEEeecC
Q psy12614 374 STDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYST--ESCVRLHSLDLD-----GDKPQISRIKNL 446 (708)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~--d~~i~i~~~~~~-----~~~~~~~~~~~~ 446 (708)
..+.+++.|+.+-+.. -..+.+-.+... +..+.+. ++.+
T Consensus 302 ---------------------------------P~vsMd~~gKIiwa~~~ei~~~~~ks~~~~~ev~DgErL~Ls-vKeL 347 (794)
T KOG0276|consen 302 ---------------------------------PAVSMDSNGKIIWAVHSEIQAVNLKSVGAQKEVTDGERLPLS-VKEL 347 (794)
T ss_pred ---------------------------------CceeecCCccEEEEcCceeeeeeceeccCcccccCCccccch-hhhc
Confidence 2234445554443311 111222211110 1111111 1111
Q ss_pred CcccccceeEEEEEecCCCeEEEEecCCc-EEEecCCCeEEEEEecCCCCCccCcceEEEEECCCCcEEEEEecCCeEEE
Q psy12614 447 PAPLFKSIFTHVLISADSTLLLAVSLNGP-LYIIDLSSLEIKYCVDPYKSNLMSDVISLVQMSECKQYIVCADRKSHVVI 525 (708)
Q Consensus 447 ~~~~~~~~i~~~~~s~d~~~l~~~~~dg~-i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~i 525 (708)
.. . ......++-||+|++++++++... ||..-.- .. .. .+.-....|++|..-.|+-..++.|++
T Consensus 348 gs-~-eiyPq~L~hsPNGrfV~VcgdGEyiIyTala~--------Rn--K~--fG~~~eFvw~~dsne~avRes~~~vki 413 (794)
T KOG0276|consen 348 GS-V-EIYPQTLAHSPNGRFVVVCGDGEYIIYTALAL--------RN--KA--FGSGLEFVWAADSNEFAVRESNGNVKI 413 (794)
T ss_pred cc-c-ccchHHhccCCCCcEEEEecCccEEEEEeeeh--------hh--cc--cccceeEEEcCCCCeEEEEecCCceEE
Confidence 11 0 111122788999999986654433 5542111 00 01 345667899999888888888999999
Q ss_pred EECCceeeecCCCCCCceEEEEcCCCCEEEEEecCCcEEEEEcCCCCCCchhhhhhccCchhhhcCCCCeeEEEeCCCCC
Q psy12614 526 WKNGQHHASLPRYRKPSTAMAIHPTLSTLVTVYSDHRIVEFDLNRKAFTTFSRKLETNHPNEWLSRQLPVLGIEFDPQDS 605 (708)
Q Consensus 526 w~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~~~ 605 (708)
+.--+....+.... .+-.+. .|.+|. ...++.+++||.++++++ +.+ .-...++.|+.+|.
T Consensus 414 ~knfke~ksi~~~~---~~e~i~-gg~Llg-~~ss~~~~fydW~~~~lV-----------rrI---~v~~k~v~w~d~g~ 474 (794)
T KOG0276|consen 414 FKNFKEHKSIRPDM---SAEGIF-GGPLLG-VRSSDFLCFYDWESGELV-----------RRI---EVTSKHVYWSDNGE 474 (794)
T ss_pred Eecceecccccccc---ceeeec-CCceEE-EEeCCeEEEEEcccceEE-----------EEE---eeccceeEEecCCC
Confidence 83223332222111 112221 344444 555667999999999876 222 12345689999999
Q ss_pred ceEEEEcCeeEEEEecCCC
Q psy12614 606 SLIYLMDDSALCVINKNKS 624 (708)
Q Consensus 606 ~l~~~~~d~~i~~wd~~~~ 624 (708)
+++.++.|. .++..++.+
T Consensus 475 lVai~~d~S-fyil~~n~d 492 (794)
T KOG0276|consen 475 LVAIAGDDS-FYILKFNAD 492 (794)
T ss_pred EEEEEecCc-eeEEEecHH
Confidence 888887654 556655533
|
|
| >KOG1539|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-36 Score=298.24 Aligned_cols=504 Identities=13% Similarity=0.149 Sum_probs=378.7
Q ss_pred eeeeeccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCC-Ce--E-EEEEecCCCCCcEEEEEEe---CCEEEEEcC
Q psy12614 17 HNIKFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISET-PH--V-DRVFIGDPLSNSIECLTWF---NDRLFSGGL 89 (708)
Q Consensus 17 ~~~~~~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~-~~--~-~~~~~~h~~~~~v~~l~~~---~~~l~s~~~ 89 (708)
+...++.+|.+.|.-+. |-|.+|+++..++.+.||+...+ +. + ...++... ..|+++.-- -+.++.|+.
T Consensus 105 ~i~~~~~~~~a~v~~l~--~fGe~lia~d~~~~l~vw~~s~~~~e~~l~~~~~~~~~--~~Ital~HP~TYLNKIvvGs~ 180 (910)
T KOG1539|consen 105 HIRHTTLLHGAKVHLLL--PFGEHLIAVDISNILFVWKTSSIQEELYLQSTFLKVEG--DFITALLHPSTYLNKIVVGSS 180 (910)
T ss_pred eEEEEeccccceEEEEe--eecceEEEEEccCcEEEEEeccccccccccceeeeccC--CceeeEecchhheeeEEEeec
Confidence 33456677777776654 45889999999999999999884 21 1 11233333 448887655 678899999
Q ss_pred CCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCE
Q psy12614 90 QGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDY 169 (708)
Q Consensus 90 d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~ 169 (708)
+|.+.+||+.+++.+++++++...|+++.-+|--..+|.|..+|+|.+++++.++.+ ..++...++|++++|..||+.
T Consensus 181 ~G~lql~Nvrt~K~v~~f~~~~s~IT~ieqsPaLDVVaiG~~~G~ViifNlK~dkil--~sFk~d~g~VtslSFrtDG~p 258 (910)
T KOG1539|consen 181 QGRLQLWNVRTGKVVYTFQEFFSRITAIEQSPALDVVAIGLENGTVIIFNLKFDKIL--MSFKQDWGRVTSLSFRTDGNP 258 (910)
T ss_pred CCcEEEEEeccCcEEEEecccccceeEeccCCcceEEEEeccCceEEEEEcccCcEE--EEEEccccceeEEEeccCCCe
Confidence 999999999999999999999999999999999899999999999999999999998 677655699999999999976
Q ss_pred EE-EecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCC--CC--eeEEEeec
Q psy12614 170 LV-TGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGK--TG--VQWSDVKT 242 (708)
Q Consensus 170 l~-~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~--~~--~~~~~~~~ 242 (708)
+. +++.. .+.+||++..+.+..+...+ .+.+....|.|..- +++.+.|+.+++|=.+ .| +.++.-.|
T Consensus 259 ~las~~~~G~m~~wDLe~kkl~~v~~nah------~~sv~~~~fl~~epVl~ta~~DnSlk~~vfD~~dg~pR~LR~R~G 332 (910)
T KOG1539|consen 259 LLASGRSNGDMAFWDLEKKKLINVTRNAH------YGSVTGATFLPGEPVLVTAGADNSLKVWVFDSGDGVPRLLRSRGG 332 (910)
T ss_pred eEEeccCCceEEEEEcCCCeeeeeeeccc------cCCcccceecCCCceEeeccCCCceeEEEeeCCCCcchheeeccC
Confidence 65 55555 89999999888877776542 78888899988775 8888899988877554 33 45677789
Q ss_pred cccCeEEEEEe-CCCCEEEEEecCCeEEEEEccCCcccccCCCC---CCCCcceEEeEEEeccccceEEEEEe-------
Q psy12614 243 HKKDILALTVS-EDENYLYCAGVDPTVVCFQRTRKPQVCSTSGP---EQGSSVWVRSVNRVIHEGDVKSLALH------- 311 (708)
Q Consensus 243 ~~~~i~~~~~s-~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~~v~~l~~~------- 311 (708)
|..+..++.|. .+|..+.+++.|++++.+++....+. ...++ .....+.-.......--.+|..+++.
T Consensus 333 Hs~Pp~~irfy~~~g~~ilsa~~Drt~r~fs~~~e~~~-~~l~~~~~~~~~kk~~~~~~~~~k~p~i~~fa~~~~RE~~W 411 (910)
T KOG1539|consen 333 HSAPPSCIRFYGSQGHFILSAKQDRTLRSFSVISESQS-QELGQLHNKKRAKKVNVFSTEKLKLPPIVEFAFENAREKEW 411 (910)
T ss_pred CCCCchheeeeccCcEEEEecccCcchhhhhhhHHHHh-HhhcccccccccccccccchhhhcCCcceeeecccchhhhh
Confidence 99999999998 78899999999999999987651110 00000 00000000000111122457777766
Q ss_pred CCEEEEEcCCCeEEEEeCCCCceeecC-ccC------CCCceEEEEcCCcEEEEE-cCCeEEEEEecCCCCCCCCCCCCC
Q psy12614 312 GNRLYSGGLDSYLSLSYYPPKTLVKYP-CTL------AQSTPVSLAKDIQHVLLQ-YTSHLELWSLGSAQSTDLSSHSNT 383 (708)
Q Consensus 312 ~~~l~s~~~d~~i~iw~~~~~~~~~~~-~~~------~~~~~~~~s~~~~~l~~~-~~~~i~i~~~~~~~~~~~~~~~~~ 383 (708)
.+.++..-.+...+.|++.++..-.+. .+. ....++++++-|++.+.+ ..|.|.+|++.++-
T Consensus 412 ~Nv~~~h~~~~~~~tW~~~n~~~G~~~L~~~~~~~~~~~~~av~vs~CGNF~~IG~S~G~Id~fNmQSGi---------- 481 (910)
T KOG1539|consen 412 DNVITAHKGKRSAYTWNFRNKTSGRHVLDPKRFKKDDINATAVCVSFCGNFVFIGYSKGTIDRFNMQSGI---------- 481 (910)
T ss_pred cceeEEecCcceEEEEeccCcccccEEecCccccccCcceEEEEEeccCceEEEeccCCeEEEEEcccCe----------
Confidence 456666667789999999988742222 122 345789999999999986 78999999999866
Q ss_pred CcccCCCCceEEEEE--EecCCCceEEEEeCCCCcEEEE-EcCCceEEEEEEecCCcceeEEeecCCcccccceeEEEEE
Q psy12614 384 TGVPLLSFPRLIVKM--SAVNNATIRCSVVSNDGKYVAY-STESCVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVLI 460 (708)
Q Consensus 384 ~~~~~~~~~~~~~~~--~~~~~~~i~~~~~s~~g~~l~~-~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 460 (708)
..... ...|..+|+.++...-++.+++ +.+|.+++|++.... .... +.- ..+++++..
T Consensus 482 ----------~r~sf~~~~ah~~~V~gla~D~~n~~~vsa~~~Gilkfw~f~~k~---l~~~---l~l---~~~~~~iv~ 542 (910)
T KOG1539|consen 482 ----------HRKSFGDSPAHKGEVTGLAVDGTNRLLVSAGADGILKFWDFKKKV---LKKS---LRL---GSSITGIVY 542 (910)
T ss_pred ----------eecccccCccccCceeEEEecCCCceEEEccCcceEEEEecCCcc---eeee---ecc---CCCcceeee
Confidence 11111 2378899999999998888887 559999999998522 1222 111 335666888
Q ss_pred ecCCCeEEEEecCCc--EEEecCCCeEEEEEecCCCCCccCcceEEEEECCCCcEEEEEecCCeEEEEECCceee-ecCC
Q psy12614 461 SADSTLLLAVSLNGP--LYIIDLSSLEIKYCVDPYKSNLMSDVISLVQMSECKQYIVCADRKSHVVIWKNGQHHA-SLPR 537 (708)
Q Consensus 461 s~d~~~l~~~~~dg~--i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~-~~~~ 537 (708)
+.....+|.+..|-. ++|..+. +.++.| .|| .+.|++++|||||+||++++.|++|++||+.+..+ ..-.
T Consensus 543 hr~s~l~a~~~ddf~I~vvD~~t~--kvvR~f---~gh--~nritd~~FS~DgrWlisasmD~tIr~wDlpt~~lID~~~ 615 (910)
T KOG1539|consen 543 HRVSDLLAIALDDFSIRVVDVVTR--KVVREF---WGH--GNRITDMTFSPDGRWLISASMDSTIRTWDLPTGTLIDGLL 615 (910)
T ss_pred eehhhhhhhhcCceeEEEEEchhh--hhhHHh---hcc--ccceeeeEeCCCCcEEEEeecCCcEEEEeccCcceeeeEe
Confidence 888888888888877 5555444 455555 467 88999999999999999999999999999996655 3344
Q ss_pred CCCCceEEEEcCCCCEEEEEecC-CcEEEEEcC
Q psy12614 538 YRKPSTAMAIHPTLSTLVTVYSD-HRIVEFDLN 569 (708)
Q Consensus 538 ~~~~v~~l~~s~d~~~l~~~~~d-g~i~vwd~~ 569 (708)
-..+.+++.|||+|.+||++..| .-|++|.-.
T Consensus 616 vd~~~~sls~SPngD~LAT~Hvd~~gIylWsNk 648 (910)
T KOG1539|consen 616 VDSPCTSLSFSPNGDFLATVHVDQNGIYLWSNK 648 (910)
T ss_pred cCCcceeeEECCCCCEEEEEEecCceEEEEEch
Confidence 56789999999999999999988 569999643
|
|
| >KOG1063|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-35 Score=285.11 Aligned_cols=535 Identities=13% Similarity=0.179 Sum_probs=374.0
Q ss_pred EEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CC---EEEEEcCCCcEEEEECCCC--eEeE
Q psy12614 33 ACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--ND---RLFSGGLQGFVNEYDMRRL--NIKS 105 (708)
Q Consensus 33 ~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~---~l~s~~~d~~i~vwd~~~~--~~~~ 105 (708)
++.|. ..+|.|. ...|.+||..+... ...+.||. ++|+|+.|. .+ ++++|+.|+.|++|.++.. .++.
T Consensus 21 sw~~~-~~vafGa-~~~Iav~dp~k~~i-~t~l~GH~--a~VnC~~~l~~s~~~a~~vsG~sD~~v~lW~l~~~~~~~i~ 95 (764)
T KOG1063|consen 21 SWGPG-GLVAFGA-GPAIAVADPEKILI-VTTLDGHV--ARVNCVHWLPTSEIVAEMVSGDSDGRVILWKLRDEYLIKIY 95 (764)
T ss_pred ccccc-ceEEecC-CceEEEeCccccee-EEeccCCc--cceEEEEEcccccccceEEEccCCCcEEEEEEeehheEEEE
Confidence 44444 3566665 45899999987644 45999999 999999998 33 7999999999999999843 3455
Q ss_pred EEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccc--cEEEEEECC-CCCEE-EEecCC-eEEE
Q psy12614 106 STAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQG--RILCTAWHS-SGDYL-VTGCAA-AVRV 180 (708)
Q Consensus 106 ~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~--~v~~~~~s~-d~~~l-~~~~~d-~i~i 180 (708)
++.+|...+ ++++.......+.+.|+.+.+||.+..+......+.-..+ -..|+++.| .+.+| +.|+.+ .|.+
T Consensus 96 ~~~g~~~~~--~cv~a~~~~~~~~~ad~~v~vw~~~~~e~~~~~~~rf~~k~~ipLcL~~~~~~~~~lla~Ggs~~~v~~ 173 (764)
T KOG1063|consen 96 TIQGHCKEC--VCVVARSSVMTCKAADGTVSVWDKQQDEVFLLAVLRFEIKEAIPLCLAALKNNKTFLLACGGSKFVVDL 173 (764)
T ss_pred eecCcceeE--EEEEeeeeEEEeeccCceEEEeecCCCceeeehheehhhhhHhhHHHhhhccCCcEEEEecCcceEEEE
Confidence 666655554 4554443334444689999999997666332233332222 234566666 34444 445555 8888
Q ss_pred EEcCCCceEEEEEecccCCCCCceeEEEEEEccCC----EEEEEcCCCcEEEEeCCCCe---------------------
Q psy12614 181 WDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADF----TIITGDSGGFVRFWDGKTGV--------------------- 235 (708)
Q Consensus 181 wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~----~l~~~~~dg~i~~wd~~~~~--------------------- 235 (708)
+.-.+++........ +|.+.|.+++|...+ .+++++.|..|++|.+.-+.
T Consensus 174 ~s~~~d~f~~v~el~-----GH~DWIrsl~f~~~~~~~~~laS~SQD~yIRiW~i~~~~~~~~~~~e~~~t~~~~~~~f~ 248 (764)
T KOG1063|consen 174 YSSSADSFARVAELE-----GHTDWIRSLAFARLGGDDLLLASSSQDRYIRIWRIVLGDDEDSNEREDSLTTLSNLPVFM 248 (764)
T ss_pred eccCCcceeEEEEee-----ccchhhhhhhhhccCCCcEEEEecCCceEEEEEEEEecCCccccccccccccccCCceee
Confidence 876655544444444 679999999998644 38899999999999864322
Q ss_pred eEEE----------eeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEe---ccc
Q psy12614 236 QWSD----------VKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRV---IHE 302 (708)
Q Consensus 236 ~~~~----------~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~---~~~ 302 (708)
.... +.+|.+.|.++.|.|.+..|++++.|.++.+|...+ ...-|.....+- +..
T Consensus 249 ~l~~i~~~is~eall~GHeDWV~sv~W~p~~~~LLSASaDksmiiW~pd~------------~tGiWv~~vRlGe~gg~a 316 (764)
T KOG1063|consen 249 ILEEIQYRISFEALLMGHEDWVYSVWWHPEGLDLLSASADKSMIIWKPDE------------NTGIWVDVVRLGEVGGSA 316 (764)
T ss_pred eeeeEEEEEehhhhhcCcccceEEEEEccchhhheecccCcceEEEecCC------------ccceEEEEEEeecccccc
Confidence 1111 248999999999999999999999999999998876 334465544443 333
Q ss_pred cceEEEEEe--CCEEEEEcCCCeEEEEeCCCCc----eeecCccCCCCceEEEEcCCcEEEE-EcCCeEEEEEecCCCCC
Q psy12614 303 GDVKSLALH--GNRLYSGGLDSYLSLSYYPPKT----LVKYPCTLAQSTPVSLAKDIQHVLL-QYTSHLELWSLGSAQST 375 (708)
Q Consensus 303 ~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~~~----~~~~~~~~~~~~~~~~s~~~~~l~~-~~~~~i~i~~~~~~~~~ 375 (708)
....+..|+ ++.+++-+..|..++|...... ...+.++......++++|.|.++++ +.|.+-++|-.-..+.
T Consensus 317 ~GF~g~lw~~n~~~ii~~g~~Gg~hlWkt~d~~~w~~~~~iSGH~~~V~dv~W~psGeflLsvs~DQTTRlFa~wg~q~- 395 (764)
T KOG1063|consen 317 GGFWGGLWSPNSNVIIAHGRTGGFHLWKTKDKTFWTQEPVISGHVDGVKDVDWDPSGEFLLSVSLDQTTRLFARWGRQQ- 395 (764)
T ss_pred cceeeEEEcCCCCEEEEecccCcEEEEeccCccceeeccccccccccceeeeecCCCCEEEEeccccceeeeccccccc-
Confidence 456777777 7789999999999999944322 3334467778899999999999987 6888888876552220
Q ss_pred CCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEE-EcCCceEEEEEEec--------------------
Q psy12614 376 DLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAY-STESCVRLHSLDLD-------------------- 434 (708)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~-~~d~~i~i~~~~~~-------------------- 434 (708)
.-....-..-|...++|+++-+....+++ ++...+|+|+....
T Consensus 396 ----------------~wHEiaRPQiHGyDl~c~~~vn~~~~FVSgAdEKVlRvF~aPk~fv~~l~~i~g~~~~~~~~~p 459 (764)
T KOG1063|consen 396 ----------------EWHEIARPQIHGYDLTCLSFVNEDLQFVSGADEKVLRVFEAPKSFVKSLMAICGKCFKGSDELP 459 (764)
T ss_pred ----------------ceeeecccccccccceeeehccCCceeeecccceeeeeecCcHHHHHHHHHHhCccccCchhcc
Confidence 01111122245555666666553233333 33455555554310
Q ss_pred -----------------------CC---------------------------cceeEEeecCCcccccceeEEEEEecCC
Q psy12614 435 -----------------------GD---------------------------KPQISRIKNLPAPLFKSIFTHVLISADS 464 (708)
Q Consensus 435 -----------------------~~---------------------------~~~~~~~~~~~~~~~~~~i~~~~~s~d~ 464 (708)
.. ...+..++++.+|. ..|.+++.+|+|
T Consensus 460 ~gA~VpaLGLSnKa~~~~e~~~G~~~~~~~et~~~~~p~~L~ePP~EdqLq~~tLwPEv~KLYGHG--yEv~~l~~s~~g 537 (764)
T KOG1063|consen 460 DGANVPALGLSNKAFFPGETNTGGEAAVCAETPLAAAPCELTEPPTEDQLQQNTLWPEVHKLYGHG--YEVYALAISPTG 537 (764)
T ss_pred cccccccccccCCCCcccccccccccceeeecccccCchhccCCChHHHHHHhccchhhHHhccCc--eeEEEEEecCCC
Confidence 00 00011223345553 478899999999
Q ss_pred CeEEEEecCCc-----EEEecCCCeEEEEEecCCCCCccCcceEEEEECCCCcEEEEEecCCeEEEEECCcee---e---
Q psy12614 465 TLLLAVSLNGP-----LYIIDLSSLEIKYCVDPYKSNLMSDVISLVQMSECKQYIVCADRKSHVVIWKNGQHH---A--- 533 (708)
Q Consensus 465 ~~l~~~~~dg~-----i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~---~--- 533 (708)
+++|+++.... |+-+++.+...++.+. +| .-.|+.++|||||++|++++.|.++.+|+..+.. .
T Consensus 538 nliASaCKS~~~ehAvI~lw~t~~W~~~~~L~---~H--sLTVT~l~FSpdg~~LLsvsRDRt~sl~~~~~~~~~e~~fa 612 (764)
T KOG1063|consen 538 NLIASACKSSLKEHAVIRLWNTANWLQVQELE---GH--SLTVTRLAFSPDGRYLLSVSRDRTVSLYEVQEDIKDEFRFA 612 (764)
T ss_pred CEEeehhhhCCccceEEEEEeccchhhhheec---cc--ceEEEEEEECCCCcEEEEeecCceEEeeeeecccchhhhhc
Confidence 99999887655 6666766656555554 56 7799999999999999999999999999998322 2
Q ss_pred ecCCCCCCceEEEEcCCCCEEEEEecCCcEEEEEcCCC--CCCchhhhhhccCch-hhhcCCCCeeEEEeCCC-----CC
Q psy12614 534 SLPRYRKPSTAMAIHPTLSTLVTVYSDHRIVEFDLNRK--AFTTFSRKLETNHPN-EWLSRQLPVLGIEFDPQ-----DS 605 (708)
Q Consensus 534 ~~~~~~~~v~~l~~s~d~~~l~~~~~dg~i~vwd~~~~--~~~~~~~~~~~~~~~-~~~~~~~~i~~l~~s~~-----~~ 605 (708)
..+.|..-|.+..|+|++.++||++.|.+|++|..+.. +.+ +. ....+...|+++++.|- +.
T Consensus 613 ~~k~HtRIIWdcsW~pde~~FaTaSRDK~VkVW~~~~~~d~~i----------~~~a~~~~~~aVTAv~~~~~~~~e~~~ 682 (764)
T KOG1063|consen 613 CLKAHTRIIWDCSWSPDEKYFATASRDKKVKVWEEPDLRDKYI----------SRFACLKFSLAVTAVAYLPVDHNEKGD 682 (764)
T ss_pred cccccceEEEEcccCcccceeEEecCCceEEEEeccCchhhhh----------hhhchhccCCceeeEEeeccccccccc
Confidence 47889999999999999999999999999999999987 333 12 34568889999999872 22
Q ss_pred ceEEEEcCeeEEEEecCCCC
Q psy12614 606 SLIYLMDDSALCVINKNKSL 625 (708)
Q Consensus 606 ~l~~~~~d~~i~~wd~~~~~ 625 (708)
.+++|-..|.|.+|......
T Consensus 683 ~vavGle~GeI~l~~~~~~~ 702 (764)
T KOG1063|consen 683 VVAVGLEKGEIVLWRRKREH 702 (764)
T ss_pred eEEEEecccEEEEEeccccc
Confidence 46778889999999976433
|
|
| >KOG2106|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-34 Score=268.05 Aligned_cols=537 Identities=14% Similarity=0.189 Sum_probs=380.0
Q ss_pred eeeeeeccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe-CCEEE-EEcCCC--
Q psy12614 16 VHNIKFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF-NDRLF-SGGLQG-- 91 (708)
Q Consensus 16 ~~~~~~~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~-~~~l~-s~~~d~-- 91 (708)
++-+--++|+.-.. .+-+-|.|..+.... +.+.+++.+...+ +.+.||. ..|.|++.+ .+..+ +|-..|
T Consensus 56 LewvygYRG~dcR~-Nly~lptgE~vyfvA--~V~Vl~n~ee~~Q--r~y~GH~--ddikc~~vHPdri~vatGQ~ag~~ 128 (626)
T KOG2106|consen 56 LEWVYGYRGVDCRN-NLYLLPTGELVYFVA--AVGVLYNWEERSQ--RHYLGHN--DDIKCMAVHPDRIRVATGQGAGTS 128 (626)
T ss_pred eEEEEeecceeeec-eeEEccCccEEEEec--cEEEEEeehhhhc--ccccCCC--CceEEEeecCCceeeccCcccccC
Confidence 33333345554433 456778887765432 3677788765332 4788999 999999999 44443 333233
Q ss_pred ------cEEEEECCCCeEeEEEeecCCceEEEEEec--CCCEEEEE--eCCCcEEEEEccCCcEEEEEecccccccEEEE
Q psy12614 92 ------FVNEYDMRRLNIKSSTAVTSGTCWCLSVHK--KKRLLAAG--TEQGHINLFQISDEGLLYEKLLDRQQGRILCT 161 (708)
Q Consensus 92 ------~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~--~~~~la~~--~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~ 161 (708)
.+++||..+...+..+......|.|++||+ .|.+|+.. +.+..+.+||++.+... ......+..|...
T Consensus 129 g~~~~phvriWdsv~L~TL~V~g~f~~GV~~vaFsk~~~G~~l~~vD~s~~h~lSVWdWqk~~~~--~~vk~sne~v~~a 206 (626)
T KOG2106|consen 129 GRPLQPHVRIWDSVTLSTLHVIGFFDRGVTCVAFSKINGGSLLCAVDDSNPHMLSVWDWQKKAKL--GPVKTSNEVVFLA 206 (626)
T ss_pred CCcCCCeeeecccccceeeeeeccccccceeeeecccCCCceEEEecCCCccccchhhchhhhcc--CcceeccceEEEE
Confidence 599999999888888887788999999998 35566554 33566899999987765 4455567789999
Q ss_pred EECCCCC-EEEEecCCeEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEEEEcCCCcEEEEeCCCCeeEEEe
Q psy12614 162 AWHSSGD-YLVTGCAAAVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDV 240 (708)
Q Consensus 162 ~~s~d~~-~l~~~~~d~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~ 240 (708)
.|+|.+. .+++++...+.+|+++.+...++........ ...|.|++|.++|.+++|+++|.|.||+..+.+..+..
T Consensus 207 ~FHPtd~nliit~Gk~H~~Fw~~~~~~l~k~~~~fek~e---kk~Vl~v~F~engdviTgDS~G~i~Iw~~~~~~~~k~~ 283 (626)
T KOG2106|consen 207 TFHPTDPNLIITCGKGHLYFWTLRGGSLVKRQGIFEKRE---KKFVLCVTFLENGDVITGDSGGNILIWSKGTNRISKQV 283 (626)
T ss_pred EeccCCCcEEEEeCCceEEEEEccCCceEEEeecccccc---ceEEEEEEEcCCCCEEeecCCceEEEEeCCCceEEeEe
Confidence 9999775 5556666699999999988777665443222 57899999999999999999999999999888887777
Q ss_pred eccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe-CCEEEEEc
Q psy12614 241 KTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH-GNRLYSGG 319 (708)
Q Consensus 241 ~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~-~~~l~s~~ 319 (708)
..|.+.|.+++...+|.+ ++|+.|+.|..||-.- .+ .....++...+.|+.++-. ++ |+.|.
T Consensus 284 ~aH~ggv~~L~~lr~Gtl-lSGgKDRki~~Wd~~y--------~k-------~r~~elPe~~G~iRtv~e~~~d-i~vGT 346 (626)
T KOG2106|consen 284 HAHDGGVFSLCMLRDGTL-LSGGKDRKIILWDDNY--------RK-------LRETELPEQFGPIRTVAEGKGD-ILVGT 346 (626)
T ss_pred eecCCceEEEEEecCccE-eecCccceEEeccccc--------cc-------cccccCchhcCCeeEEecCCCc-EEEee
Confidence 799999999999999954 5599999999999433 11 1223445556778877766 44 55555
Q ss_pred CCCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEEEcCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEE
Q psy12614 320 LDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMS 399 (708)
Q Consensus 320 ~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (708)
..+.|..=.+ +++ .....
T Consensus 347 trN~iL~Gt~----------------------------------------~~~----------------------f~~~v 364 (626)
T KOG2106|consen 347 TRNFILQGTL----------------------------------------ENG----------------------FTLTV 364 (626)
T ss_pred ccceEEEeee----------------------------------------cCC----------------------ceEEE
Confidence 5554432222 111 11222
Q ss_pred ecCCCceEEEEeCCCCcEEEE-EcCCceEEEEEEecCCcceeEEeecCCcccccceeEEEEEecCCCeEEEEecCCc--E
Q psy12614 400 AVNNATIRCSVVSNDGKYVAY-STESCVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVLISADSTLLLAVSLNGP--L 476 (708)
Q Consensus 400 ~~~~~~i~~~~~s~~g~~l~~-~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~~~~~dg~--i 476 (708)
.+|......++.+|+...+++ |.|+.+++|+ + .++.+.++- ..+..|+.|.|.| .+|+|+..|. +
T Consensus 365 ~gh~delwgla~hps~~q~~T~gqdk~v~lW~-~---~k~~wt~~~-------~d~~~~~~fhpsg-~va~Gt~~G~w~V 432 (626)
T KOG2106|consen 365 QGHGDELWGLATHPSKNQLLTCGQDKHVRLWN-D---HKLEWTKII-------EDPAECADFHPSG-VVAVGTATGRWFV 432 (626)
T ss_pred EecccceeeEEcCCChhheeeccCcceEEEcc-C---CceeEEEEe-------cCceeEeeccCcc-eEEEeeccceEEE
Confidence 366778899999998888887 5699999999 2 445555422 2355669999999 9999999999 5
Q ss_pred EEecCCCeEEEEEecCCCCCccCcceEEEEECCCCcEEEEEecCCeEEEEECCc---eeee-cCCCCCCceEEEEcCCCC
Q psy12614 477 YIIDLSSLEIKYCVDPYKSNLMSDVISLVQMSECKQYIVCADRKSHVVIWKNGQ---HHAS-LPRYRKPSTAMAIHPTLS 552 (708)
Q Consensus 477 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~---~~~~-~~~~~~~v~~l~~s~d~~ 552 (708)
.+.++. ..+..-.. ...+++++|+|+|.+||.|+.|+.|+||.+.. .... -.-+.++|+.+.||+|++
T Consensus 433 ~d~e~~--~lv~~~~d------~~~ls~v~ysp~G~~lAvgs~d~~iyiy~Vs~~g~~y~r~~k~~gs~ithLDwS~Ds~ 504 (626)
T KOG2106|consen 433 LDTETQ--DLVTIHTD------NEQLSVVRYSPDGAFLAVGSHDNHIYIYRVSANGRKYSRVGKCSGSPITHLDWSSDSQ 504 (626)
T ss_pred Eecccc--eeEEEEec------CCceEEEEEcCCCCEEEEecCCCeEEEEEECCCCcEEEEeeeecCceeEEeeecCCCc
Confidence 555554 33322221 55899999999999999999999999999981 1111 122338999999999999
Q ss_pred EEEEEecCCcEEEEEcCCCCC------CchhhhhhccCchh-hhcCCCCeeEEEeCCCCCceEEEEcCeeEEEEecCCCC
Q psy12614 553 TLVTVYSDHRIVEFDLNRKAF------TTFSRKLETNHPNE-WLSRQLPVLGIEFDPQDSSLIYLMDDSALCVINKNKSL 625 (708)
Q Consensus 553 ~l~~~~~dg~i~vwd~~~~~~------~~~~~~~~~~~~~~-~~~~~~~i~~l~~s~~~~~l~~~~~d~~i~~wd~~~~~ 625 (708)
+|.+.+.|-.|..|.-..-+. ++|....-.--... ...+...|..++-+.+.++|+++.+.|.|++|......
T Consensus 505 ~~~~~S~d~eiLyW~~~~~~~~ts~kDvkW~t~~c~lGF~v~g~s~~t~i~a~~rs~~~~~lA~gdd~g~v~lf~yPc~s 584 (626)
T KOG2106|consen 505 FLVSNSGDYEILYWKPSECKQITSVKDVKWATYTCTLGFEVFGGSDGTDINAVARSHCEKLLASGDDFGKVHLFSYPCSS 584 (626)
T ss_pred eEEeccCceEEEEEccccCcccceecceeeeeeEEEEEEEEecccCCchHHHhhhhhhhhhhhccccCceEEEEccccCC
Confidence 999999999999994332222 12322111100011 13455677888889999999999999999999988777
Q ss_pred CcccCccccCCCCCCCCCCCCCccccccceeeEEEecCcceEEEeecCCCcEEE
Q psy12614 626 AHADAKIPRLGPKVVSGDSSNSTHVIESKVAFHFVRRNKHLVYFGSLNDKEMLS 679 (708)
Q Consensus 626 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 679 (708)
|+...... ........++++..+...+++.+ .+..++.
T Consensus 585 ~rA~~he~--------------~ghs~~vt~V~Fl~~d~~li~tg--~D~Si~q 622 (626)
T KOG2106|consen 585 PRAPSHEY--------------GGHSSHVTNVAFLCKDSHLISTG--KDTSIMQ 622 (626)
T ss_pred Ccccceee--------------ccccceeEEEEEeeCCceEEecC--CCceEEE
Confidence 66654322 22344566788888888888777 4444443
|
|
| >KOG0295|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-38 Score=281.14 Aligned_cols=282 Identities=13% Similarity=0.174 Sum_probs=261.8
Q ss_pred eeccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEE
Q psy12614 20 KFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYD 97 (708)
Q Consensus 20 ~~~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd 97 (708)
.-+.+|..+|+.+-|+|+...+|++++|++|++||..+++..+ .+.||. .+|..++|+ |++|++++.|=.+++||
T Consensus 102 ~~l~g~r~~vt~v~~hp~~~~v~~as~d~tikv~D~~tg~~e~-~LrGHt--~sv~di~~~a~Gk~l~tcSsDl~~~LWd 178 (406)
T KOG0295|consen 102 QKLAGHRSSVTRVIFHPSEALVVSASEDATIKVFDTETGELER-SLRGHT--DSVFDISFDASGKYLATCSSDLSAKLWD 178 (406)
T ss_pred hhhhccccceeeeeeccCceEEEEecCCceEEEEEccchhhhh-hhhccc--cceeEEEEecCccEEEecCCccchhhee
Confidence 3467899999999999999999999999999999999999865 999999 889999999 99999999999999999
Q ss_pred CCC-CeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC
Q psy12614 98 MRR-LNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA 176 (708)
Q Consensus 98 ~~~-~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d 176 (708)
.++ -++++.+.+|...|.+++|-|.|.++++++.|.+|+.|++.++..+ ..+.+|...|..+..+.||..+|+++.|
T Consensus 179 ~~~~~~c~ks~~gh~h~vS~V~f~P~gd~ilS~srD~tik~We~~tg~cv--~t~~~h~ewvr~v~v~~DGti~As~s~d 256 (406)
T KOG0295|consen 179 FDTFFRCIKSLIGHEHGVSSVFFLPLGDHILSCSRDNTIKAWECDTGYCV--KTFPGHSEWVRMVRVNQDGTIIASCSND 256 (406)
T ss_pred HHHHHHHHHHhcCcccceeeEEEEecCCeeeecccccceeEEecccceeE--EeccCchHhEEEEEecCCeeEEEecCCC
Confidence 988 6788888999999999999999999999999999999999999998 8999999999999999999999999999
Q ss_pred -eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccC--------------C-E-EEEEcCCCcEEEEeCCCCeeEEE
Q psy12614 177 -AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCAD--------------F-T-IITGDSGGFVRFWDGKTGVQWSD 239 (708)
Q Consensus 177 -~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--------------~-~-l~~~~~dg~i~~wd~~~~~~~~~ 239 (708)
++++|-+.++++...+.. |+-+|.+++|.|. + + +.+++.|++|++||+.+|.++.+
T Consensus 257 qtl~vW~~~t~~~k~~lR~-------hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg~cL~t 329 (406)
T KOG0295|consen 257 QTLRVWVVATKQCKAELRE-------HEHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVSTGMCLFT 329 (406)
T ss_pred ceEEEEEeccchhhhhhhc-------cccceEEEEecccccCcchhhccCCCCCccEEEeecccceEEEEeccCCeEEEE
Confidence 999999999987777763 4888999998762 1 3 77899999999999999999999
Q ss_pred eeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEE
Q psy12614 240 VKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYS 317 (708)
Q Consensus 240 ~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s 317 (708)
+.+|...|..++|+|.|++|+++..|+++++||+.. ++ ....+..|.+-++++.|+ ..++++
T Consensus 330 L~ghdnwVr~~af~p~Gkyi~ScaDDktlrvwdl~~--------~~--------cmk~~~ah~hfvt~lDfh~~~p~VvT 393 (406)
T KOG0295|consen 330 LVGHDNWVRGVAFSPGGKYILSCADDKTLRVWDLKN--------LQ--------CMKTLEAHEHFVTSLDFHKTAPYVVT 393 (406)
T ss_pred EecccceeeeeEEcCCCeEEEEEecCCcEEEEEecc--------ce--------eeeccCCCcceeEEEecCCCCceEEe
Confidence 999999999999999999999999999999999999 65 677788999999999999 779999
Q ss_pred EcCCCeEEEEeC
Q psy12614 318 GGLDSYLSLSYY 329 (708)
Q Consensus 318 ~~~d~~i~iw~~ 329 (708)
|+-|..+++|.-
T Consensus 394 GsVdqt~KvwEc 405 (406)
T KOG0295|consen 394 GSVDQTVKVWEC 405 (406)
T ss_pred ccccceeeeeec
Confidence 999999999963
|
|
| >KOG0315|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-36 Score=253.89 Aligned_cols=282 Identities=16% Similarity=0.209 Sum_probs=241.3
Q ss_pred CEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe-CCEEEEEcCCCcEEEEECCCCe--EeEEEeecCCceE
Q psy12614 39 SRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF-NDRLFSGGLQGFVNEYDMRRLN--IKSSTAVTSGTCW 115 (708)
Q Consensus 39 ~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~-~~~l~s~~~d~~i~vwd~~~~~--~~~~~~~~~~~v~ 115 (708)
-+||+++.|.+|++|...+|.+.+ +++-.. +.|+.+... .+..++++....|++||+.+++ ++.++.+|...|.
T Consensus 11 viLvsA~YDhTIRfWqa~tG~C~r-Tiqh~d--sqVNrLeiTpdk~~LAaa~~qhvRlyD~~S~np~Pv~t~e~h~kNVt 87 (311)
T KOG0315|consen 11 VILVSAGYDHTIRFWQALTGICSR-TIQHPD--SQVNRLEITPDKKDLAAAGNQHVRLYDLNSNNPNPVATFEGHTKNVT 87 (311)
T ss_pred eEEEeccCcceeeeeehhcCeEEE-EEecCc--cceeeEEEcCCcchhhhccCCeeEEEEccCCCCCceeEEeccCCceE
Confidence 479999999999999999999987 777555 999999999 4444444455789999999876 6899999999999
Q ss_pred EEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEe
Q psy12614 116 CLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSL 194 (708)
Q Consensus 116 ~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~ 194 (708)
++.|..||+++++|++||+++|||++.... .....|..+|+++..+|+...|+++..+ .|++||+.+..+...+..
T Consensus 88 aVgF~~dgrWMyTgseDgt~kIWdlR~~~~---qR~~~~~spVn~vvlhpnQteLis~dqsg~irvWDl~~~~c~~~liP 164 (311)
T KOG0315|consen 88 AVGFQCDGRWMYTGSEDGTVKIWDLRSLSC---QRNYQHNSPVNTVVLHPNQTELISGDQSGNIRVWDLGENSCTHELIP 164 (311)
T ss_pred EEEEeecCeEEEecCCCceEEEEeccCccc---chhccCCCCcceEEecCCcceEEeecCCCcEEEEEccCCccccccCC
Confidence 999999999999999999999999998665 4455677999999999999999999999 999999998877766654
Q ss_pred cccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCC------eeEEEeeccccCeEEEEEeCCCCEEEEEecCCe
Q psy12614 195 DKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTG------VQWSDVKTHKKDILALTVSEDENYLYCAGVDPT 267 (708)
Q Consensus 195 ~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~------~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~ 267 (708)
.. ...|.++...|||. ++++...|..++|++-+. +++..++.|.+.+..+.+|||+++|++++.|.+
T Consensus 165 e~------~~~i~sl~v~~dgsml~a~nnkG~cyvW~l~~~~~~s~l~P~~k~~ah~~~il~C~lSPd~k~lat~ssdkt 238 (311)
T KOG0315|consen 165 ED------DTSIQSLTVMPDGSMLAAANNKGNCYVWRLLNHQTASELEPVHKFQAHNGHILRCLLSPDVKYLATCSSDKT 238 (311)
T ss_pred CC------CcceeeEEEcCCCcEEEEecCCccEEEEEccCCCccccceEhhheecccceEEEEEECCCCcEEEeecCCce
Confidence 32 78899999999996 888888999999998764 355668899999999999999999999999999
Q ss_pred EEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEEEcCCCeEEEEeCCCCc-eeecCccCCCC
Q psy12614 268 VVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSGGLDSYLSLSYYPPKT-LVKYPCTLAQS 344 (708)
Q Consensus 268 i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~~~-~~~~~~~~~~~ 344 (708)
++||+.++ . +.....+.+|...+...+|+ +.+|++++.|+.+++|++..++ .+...++....
T Consensus 239 v~iwn~~~--------~-------~kle~~l~gh~rWvWdc~FS~dg~YlvTassd~~~rlW~~~~~k~v~qy~gh~K~~ 303 (311)
T KOG0315|consen 239 VKIWNTDD--------F-------FKLELVLTGHQRWVWDCAFSADGEYLVTASSDHTARLWDLSAGKEVRQYQGHHKAA 303 (311)
T ss_pred EEEEecCC--------c-------eeeEEEeecCCceEEeeeeccCccEEEecCCCCceeecccccCceeeecCCccccc
Confidence 99999987 2 23567788999999999999 9999999999999999998876 55555444433
Q ss_pred ceE
Q psy12614 345 TPV 347 (708)
Q Consensus 345 ~~~ 347 (708)
.++
T Consensus 304 vc~ 306 (311)
T KOG0315|consen 304 VCV 306 (311)
T ss_pred EEE
Confidence 333
|
|
| >KOG0263|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-37 Score=300.86 Aligned_cols=254 Identities=20% Similarity=0.392 Sum_probs=232.6
Q ss_pred ccceeeeeeeeccCC--CCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCC-----------------------------
Q psy12614 11 MGTYGVHNIKFYAPE--PKVINCIACEPKSSRLAVSRADQSIEIWDISETP----------------------------- 59 (708)
Q Consensus 11 ~~~~~~~~~~~~~~h--~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~----------------------------- 59 (708)
+..-.+..+.++..| ...++|..|++|++.||.|..|..|++|.+...+
T Consensus 361 l~~~~lpSic~YT~~nt~~~v~ca~fSddssmlA~Gf~dS~i~~~Sl~p~kl~~lk~~~~l~~~d~~sad~~~~~~D~~~ 440 (707)
T KOG0263|consen 361 LGRNSLPSICMYTFHNTYQGVTCAEFSDDSSMLACGFVDSSVRVWSLTPKKLKKLKDASDLSNIDTESADVDVDMLDDDS 440 (707)
T ss_pred cCCCCCCcEEEEEEEEcCCcceeEeecCCcchhhccccccEEEEEecchhhhccccchhhhccccccccchhhhhccccC
Confidence 344445556665544 4789999999999999999999999999987311
Q ss_pred -eEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEE
Q psy12614 60 -HVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHIN 136 (708)
Q Consensus 60 -~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~ 136 (708)
...+.+-||. ++|....|+ .++|++++.|+++++|.+.+..++..+++|..+|+.+.|+|.|-++|+++.|++.+
T Consensus 441 ~~~~~~L~GH~--GPVyg~sFsPd~rfLlScSED~svRLWsl~t~s~~V~y~GH~~PVwdV~F~P~GyYFatas~D~tAr 518 (707)
T KOG0263|consen 441 SGTSRTLYGHS--GPVYGCSFSPDRRFLLSCSEDSSVRLWSLDTWSCLVIYKGHLAPVWDVQFAPRGYYFATASHDQTAR 518 (707)
T ss_pred CceeEEeecCC--CceeeeeecccccceeeccCCcceeeeecccceeEEEecCCCcceeeEEecCCceEEEecCCCceee
Confidence 1234688999 999999999 89999999999999999999999999999999999999999999999999999999
Q ss_pred EEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCC
Q psy12614 137 LFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADF 215 (708)
Q Consensus 137 iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 215 (708)
+|........ +.+.+|-+.|.|+.|+|+..|+++|+.| ++++||+.+|..++.+. +|..+|.+++|+|+|
T Consensus 519 LWs~d~~~Pl--RifaghlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G~~VRiF~-------GH~~~V~al~~Sp~G 589 (707)
T KOG0263|consen 519 LWSTDHNKPL--RIFAGHLSDVDCVSFHPNSNYVATGSSDRTVRLWDVSTGNSVRIFT-------GHKGPVTALAFSPCG 589 (707)
T ss_pred eeecccCCch--hhhcccccccceEEECCcccccccCCCCceEEEEEcCCCcEEEEec-------CCCCceEEEEEcCCC
Confidence 9999987776 8899999999999999999999999999 99999999999999886 559999999999999
Q ss_pred E-EEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccC
Q psy12614 216 T-IITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTR 275 (708)
Q Consensus 216 ~-l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~ 275 (708)
+ |++|+.||.|.+||+.+++.+..+.+|.+.|.++.|+.||..||+|+.|.+|++||+..
T Consensus 590 r~LaSg~ed~~I~iWDl~~~~~v~~l~~Ht~ti~SlsFS~dg~vLasgg~DnsV~lWD~~~ 650 (707)
T KOG0263|consen 590 RYLASGDEDGLIKIWDLANGSLVKQLKGHTGTIYSLSFSRDGNVLASGGADNSVRLWDLTK 650 (707)
T ss_pred ceEeecccCCcEEEEEcCCCcchhhhhcccCceeEEEEecCCCEEEecCCCCeEEEEEchh
Confidence 7 99999999999999999999999999999999999999999999999999999999976
|
|
| >KOG0645|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-35 Score=253.25 Aligned_cols=290 Identities=17% Similarity=0.286 Sum_probs=241.2
Q ss_pred eeeeeeccCCCCcEEEEEEcCC-CCEEEEEeCCCcEEEEeCCCCC---eEEEEEecCCCCCcEEEEEEe--CCEEEEEcC
Q psy12614 16 VHNIKFYAPEPKVINCIACEPK-SSRLAVSRADQSIEIWDISETP---HVDRVFIGDPLSNSIECLTWF--NDRLFSGGL 89 (708)
Q Consensus 16 ~~~~~~~~~h~~~v~~~~~s~~-~~~la~~~~dg~v~iwd~~~~~---~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~ 89 (708)
+-..+.+.+|++.|-.++|+|- |..||+|+.|..|+||+...+. +....-.+|+ ..|++++|+ |++|++++.
T Consensus 4 l~~~~~~~gh~~r~W~~awhp~~g~ilAscg~Dk~vriw~~~~~~s~~ck~vld~~hk--rsVRsvAwsp~g~~La~aSF 81 (312)
T KOG0645|consen 4 LILEQKLSGHKDRVWSVAWHPGKGVILASCGTDKAVRIWSTSSGDSWTCKTVLDDGHK--RSVRSVAWSPHGRYLASASF 81 (312)
T ss_pred ceeEEeecCCCCcEEEEEeccCCceEEEeecCCceEEEEecCCCCcEEEEEeccccch--heeeeeeecCCCcEEEEeec
Confidence 4456678999999999999998 8999999999999999998522 2222334788 999999998 999999999
Q ss_pred CCcEEEEECCCC--eEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccC-CcEEEEEecccccccEEEEEECCC
Q psy12614 90 QGFVNEYDMRRL--NIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISD-EGLLYEKLLDRQQGRILCTAWHSS 166 (708)
Q Consensus 90 d~~i~vwd~~~~--~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~s~d 166 (708)
|.++.||.-..+ +++.++.+|...|.+++|+++|++||+++.|.+|.||.+.. .+......+.+|...|..+.|+|.
T Consensus 82 D~t~~Iw~k~~~efecv~~lEGHEnEVK~Vaws~sG~~LATCSRDKSVWiWe~deddEfec~aVL~~HtqDVK~V~WHPt 161 (312)
T KOG0645|consen 82 DATVVIWKKEDGEFECVATLEGHENEVKCVAWSASGNYLATCSRDKSVWIWEIDEDDEFECIAVLQEHTQDVKHVIWHPT 161 (312)
T ss_pred cceEEEeecCCCceeEEeeeeccccceeEEEEcCCCCEEEEeeCCCeEEEEEecCCCcEEEEeeeccccccccEEEEcCC
Confidence 999999987654 58899999999999999999999999999999999999874 455555789999999999999999
Q ss_pred CCEEEEecCC-eEEEEEcCC-C--ceEEEEEecccCCCCCceeEEEEEEccCC-EEEEEcCCCcEEEEeCCCCeeEEEee
Q psy12614 167 GDYLVTGCAA-AVRVWDIHK-G--HAIHKMSLDKSSKFSKNTAVWCVAFCADF-TIITGDSGGFVRFWDGKTGVQWSDVK 241 (708)
Q Consensus 167 ~~~l~~~~~d-~i~iwd~~~-~--~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~~~~~dg~i~~wd~~~~~~~~~~~ 241 (708)
..+|++++.| +|++|+-.. + .+..++. +|...|++++|.+.| ++++++.|++++||...+. .-.
T Consensus 162 ~dlL~S~SYDnTIk~~~~~~dddW~c~~tl~-------g~~~TVW~~~F~~~G~rl~s~sdD~tv~Iw~~~~~----~~~ 230 (312)
T KOG0645|consen 162 EDLLFSCSYDNTIKVYRDEDDDDWECVQTLD-------GHENTVWSLAFDNIGSRLVSCSDDGTVSIWRLYTD----LSG 230 (312)
T ss_pred cceeEEeccCCeEEEEeecCCCCeeEEEEec-------CccceEEEEEecCCCceEEEecCCcceEeeeeccC----cch
Confidence 9999999999 999999773 3 3455554 447799999999999 6999999999999986522 112
Q ss_pred ccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEe-EEEeccccceEEEEEe---CCEEEE
Q psy12614 242 THKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRS-VNRVIHEGDVKSLALH---GNRLYS 317 (708)
Q Consensus 242 ~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~v~~l~~~---~~~l~s 317 (708)
.|...+..+.|. + ..|++++.|+.|++|.... +. ..+.|... ..-..|...|+++.|. .++|++
T Consensus 231 ~~sr~~Y~v~W~-~-~~IaS~ggD~~i~lf~~s~--------~~--d~p~~~l~~~~~~aHe~dVNsV~w~p~~~~~L~s 298 (312)
T KOG0645|consen 231 MHSRALYDVPWD-N-GVIASGGGDDAIRLFKESD--------SP--DEPSWNLLAKKEGAHEVDVNSVQWNPKVSNRLAS 298 (312)
T ss_pred hcccceEeeeec-c-cceEeccCCCEEEEEEecC--------CC--CCchHHHHHhhhcccccccceEEEcCCCCCceee
Confidence 367889999998 4 4899999999999998776 32 11222222 2345788899999999 689999
Q ss_pred EcCCCeEEEEeCC
Q psy12614 318 GGLDSYLSLSYYP 330 (708)
Q Consensus 318 ~~~d~~i~iw~~~ 330 (708)
++.||.+++|.+.
T Consensus 299 ~~DDG~v~~W~l~ 311 (312)
T KOG0645|consen 299 GGDDGIVNFWELE 311 (312)
T ss_pred cCCCceEEEEEec
Confidence 9999999999874
|
|
| >KOG0273|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-36 Score=273.87 Aligned_cols=324 Identities=19% Similarity=0.259 Sum_probs=272.8
Q ss_pred eeeccCCCCcEEEEEEcCCCC-EEEEEeCCCcEEEEeCCCCC--e-----EEE--EEecCC--CCCcEEEEEEe--CCEE
Q psy12614 19 IKFYAPEPKVINCIACEPKSS-RLAVSRADQSIEIWDISETP--H-----VDR--VFIGDP--LSNSIECLTWF--NDRL 84 (708)
Q Consensus 19 ~~~~~~h~~~v~~~~~s~~~~-~la~~~~dg~v~iwd~~~~~--~-----~~~--~~~~h~--~~~~v~~l~~~--~~~l 84 (708)
.+.+. |..+|.+.+|+|-.. .||+|+.|-..++|++.... . ++. ..-++. -...|++++|+ |..|
T Consensus 172 ~kvl~-~~~~V~~~~WnP~~~~llasg~~~s~ari~~l~e~~~~~~~q~~lrh~~~~~~~s~~~nkdVT~L~Wn~~G~~L 250 (524)
T KOG0273|consen 172 AKVLR-HESEVFICAWNPLRDGLLASGSGDSTARIWNLLENSNIGSTQLVLRHCIREGGKSVPSNKDVTSLDWNNDGTLL 250 (524)
T ss_pred eeecc-CCCceEEEecCchhhhhhhccCCccceeeeeehhhccccchhhhhhhhhhhhcccCCccCCcceEEecCCCCeE
Confidence 34555 999999999999776 89999999999999998511 0 000 011111 13679999999 9999
Q ss_pred EEEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEEC
Q psy12614 85 FSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWH 164 (708)
Q Consensus 85 ~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s 164 (708)
|+|+.||.+++|+. .|.++.++..|.++|.++.|+.+|++|++++.|+++.+||..++... ..+.-|..+-..+.|-
T Consensus 251 atG~~~G~~riw~~-~G~l~~tl~~HkgPI~slKWnk~G~yilS~~vD~ttilwd~~~g~~~--q~f~~~s~~~lDVdW~ 327 (524)
T KOG0273|consen 251 ATGSEDGEARIWNK-DGNLISTLGQHKGPIFSLKWNKKGTYILSGGVDGTTILWDAHTGTVK--QQFEFHSAPALDVDWQ 327 (524)
T ss_pred EEeecCcEEEEEec-CchhhhhhhccCCceEEEEEcCCCCEEEeccCCccEEEEeccCceEE--EeeeeccCCccceEEe
Confidence 99999999999995 45778899999999999999999999999999999999999999887 6677778777888896
Q ss_pred CCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCeeEEEeec
Q psy12614 165 SSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDVKT 242 (708)
Q Consensus 165 ~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~~~ 242 (708)
.+ ..+++++.| .|+++.+...+++.++. +|...|.++.|.|.|. |++++.|+++++|+.........+.+
T Consensus 328 ~~-~~F~ts~td~~i~V~kv~~~~P~~t~~-------GH~g~V~alk~n~tg~LLaS~SdD~TlkiWs~~~~~~~~~l~~ 399 (524)
T KOG0273|consen 328 SN-DEFATSSTDGCIHVCKVGEDRPVKTFI-------GHHGEVNALKWNPTGSLLASCSDDGTLKIWSMGQSNSVHDLQA 399 (524)
T ss_pred cC-ceEeecCCCceEEEEEecCCCcceeee-------cccCceEEEEECCCCceEEEecCCCeeEeeecCCCcchhhhhh
Confidence 54 467888888 99999998888888887 4489999999999996 88999999999999988888999999
Q ss_pred cccCeEEEEEeCCC---------CEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--
Q psy12614 243 HKKDILALTVSEDE---------NYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH-- 311 (708)
Q Consensus 243 ~~~~i~~~~~s~~~---------~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~-- 311 (708)
|...|..+.|+|.| ..+++++.|+++++||... |. ++..+..|..+|.+++|+
T Consensus 400 Hskei~t~~wsp~g~v~~n~~~~~~l~sas~dstV~lwdv~~--------gv--------~i~~f~kH~~pVysvafS~~ 463 (524)
T KOG0273|consen 400 HSKEIYTIKWSPTGPVTSNPNMNLMLASASFDSTVKLWDVES--------GV--------PIHTLMKHQEPVYSVAFSPN 463 (524)
T ss_pred hccceeeEeecCCCCccCCCcCCceEEEeecCCeEEEEEccC--------Cc--------eeEeeccCCCceEEEEecCC
Confidence 99999999999965 5789999999999999999 87 888999999999999999
Q ss_pred CCEEEEEcCCCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEEEcCCeEEEEEecCCCCCCCCCCCCCCcccCCCC
Q psy12614 312 GNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSF 391 (708)
Q Consensus 312 ~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (708)
+.++++|+.||.|.+|+..+..+.+-.
T Consensus 464 g~ylAsGs~dg~V~iws~~~~~l~~s~----------------------------------------------------- 490 (524)
T KOG0273|consen 464 GRYLASGSLDGCVHIWSTKTGKLVKSY----------------------------------------------------- 490 (524)
T ss_pred CcEEEecCCCCeeEeccccchheeEee-----------------------------------------------------
Confidence 999999999999999988765422221
Q ss_pred ceEEEEEEecCCCceEEEEeCCCCcEEEEE-cCCceEEEEEE
Q psy12614 392 PRLIVKMSAVNNATIRCSVVSNDGKYVAYS-TESCVRLHSLD 432 (708)
Q Consensus 392 ~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~-~d~~i~i~~~~ 432 (708)
...+.|..+.|+.+|.+|.++ .|+.+++.|+.
T Consensus 491 ---------~~~~~Ifel~Wn~~G~kl~~~~sd~~vcvldlr 523 (524)
T KOG0273|consen 491 ---------QGTGGIFELCWNAAGDKLGACASDGSVCVLDLR 523 (524)
T ss_pred ---------cCCCeEEEEEEcCCCCEEEEEecCCCceEEEec
Confidence 234557888888888888774 48888887764
|
|
| >KOG0273|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-36 Score=275.19 Aligned_cols=274 Identities=16% Similarity=0.339 Sum_probs=246.7
Q ss_pred CCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECCCCeE
Q psy12614 26 PKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMRRLNI 103 (708)
Q Consensus 26 ~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~~~ 103 (708)
+..|++++|+.+|..||+|+.||.++||+...+ .+. ++..|+ ++|.++.|+ |.+|++++.|+++.+||..++..
T Consensus 235 nkdVT~L~Wn~~G~~LatG~~~G~~riw~~~G~-l~~-tl~~Hk--gPI~slKWnk~G~yilS~~vD~ttilwd~~~g~~ 310 (524)
T KOG0273|consen 235 NKDVTSLDWNNDGTLLATGSEDGEARIWNKDGN-LIS-TLGQHK--GPIFSLKWNKKGTYILSGGVDGTTILWDAHTGTV 310 (524)
T ss_pred cCCcceEEecCCCCeEEEeecCcEEEEEecCch-hhh-hhhccC--CceEEEEEcCCCCEEEeccCCccEEEEeccCceE
Confidence 468999999999999999999999999998754 343 899999 999999999 99999999999999999999999
Q ss_pred eEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEE
Q psy12614 104 KSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWD 182 (708)
Q Consensus 104 ~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd 182 (708)
...+..|..+-..+.|-.+. .+++.+.|+.|+++.+.....+ .++.+|.+.|.++.|.|.|.+|++++.| +++||+
T Consensus 311 ~q~f~~~s~~~lDVdW~~~~-~F~ts~td~~i~V~kv~~~~P~--~t~~GH~g~V~alk~n~tg~LLaS~SdD~TlkiWs 387 (524)
T KOG0273|consen 311 KQQFEFHSAPALDVDWQSND-EFATSSTDGCIHVCKVGEDRPV--KTFIGHHGEVNALKWNPTGSLLASCSDDGTLKIWS 387 (524)
T ss_pred EEeeeeccCCccceEEecCc-eEeecCCCceEEEEEecCCCcc--eeeecccCceEEEEECCCCceEEEecCCCeeEeee
Confidence 99999998887778887654 5788899999999999988877 7899999999999999999999999999 999999
Q ss_pred cCCCceEEEEEecccCCCCCceeEEEEEEccCC----------EEEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEE
Q psy12614 183 IHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADF----------TIITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTV 252 (708)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~----------~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~ 252 (708)
.........+.. |...|+.+.|+|+| .+++++.|++|++||+..+.++.++..|..+|.+++|
T Consensus 388 ~~~~~~~~~l~~-------Hskei~t~~wsp~g~v~~n~~~~~~l~sas~dstV~lwdv~~gv~i~~f~kH~~pVysvaf 460 (524)
T KOG0273|consen 388 MGQSNSVHDLQA-------HSKEIYTIKWSPTGPVTSNPNMNLMLASASFDSTVKLWDVESGVPIHTLMKHQEPVYSVAF 460 (524)
T ss_pred cCCCcchhhhhh-------hccceeeEeecCCCCccCCCcCCceEEEeecCCeEEEEEccCCceeEeeccCCCceEEEEe
Confidence 988888777764 48899999999964 2889999999999999999999999999999999999
Q ss_pred eCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEEEcCCCeEEEEeCC
Q psy12614 253 SEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSGGLDSYLSLSYYP 330 (708)
Q Consensus 253 s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~ 330 (708)
+|+|+++++|+.||.|.+|+..+ ++ ..+.+ ...+.|..++|+ |++|..+-.|+.+++.|++
T Consensus 461 S~~g~ylAsGs~dg~V~iws~~~--------~~--------l~~s~-~~~~~Ifel~Wn~~G~kl~~~~sd~~vcvldlr 523 (524)
T KOG0273|consen 461 SPNGRYLASGSLDGCVHIWSTKT--------GK--------LVKSY-QGTGGIFELCWNAAGDKLGACASDGSVCVLDLR 523 (524)
T ss_pred cCCCcEEEecCCCCeeEeccccc--------hh--------eeEee-cCCCeEEEEEEcCCCCEEEEEecCCCceEEEec
Confidence 99999999999999999999999 75 33333 445679999999 9999999999999998874
|
|
| >KOG0285|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-36 Score=267.81 Aligned_cols=292 Identities=21% Similarity=0.303 Sum_probs=257.8
Q ss_pred EEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEE
Q psy12614 61 VDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLF 138 (708)
Q Consensus 61 ~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iw 138 (708)
+.+.+.||. +.|.|+++. +.++++|+.|++|+|||+.+|++..++.+|-..|..+++|+-..||++++.|+.|+.|
T Consensus 143 l~rVi~gHl--gWVr~vavdP~n~wf~tgs~DrtikIwDlatg~LkltltGhi~~vr~vavS~rHpYlFs~gedk~VKCw 220 (460)
T KOG0285|consen 143 LYRVISGHL--GWVRSVAVDPGNEWFATGSADRTIKIWDLATGQLKLTLTGHIETVRGVAVSKRHPYLFSAGEDKQVKCW 220 (460)
T ss_pred ehhhhhhcc--ceEEEEeeCCCceeEEecCCCceeEEEEcccCeEEEeecchhheeeeeeecccCceEEEecCCCeeEEE
Confidence 345788999 999999999 8899999999999999999999999999999999999999999999999999999999
Q ss_pred EccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEcc-CCE
Q psy12614 139 QISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCA-DFT 216 (708)
Q Consensus 139 d~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~ 216 (708)
|++..+.+ +.+.+|-..|.+++.+|.-..|++|++| ++++||+++...+..+. +|..+|..+.+.| |.+
T Consensus 221 DLe~nkvI--R~YhGHlS~V~~L~lhPTldvl~t~grDst~RvWDiRtr~~V~~l~-------GH~~~V~~V~~~~~dpq 291 (460)
T KOG0285|consen 221 DLEYNKVI--RHYHGHLSGVYCLDLHPTLDVLVTGGRDSTIRVWDIRTRASVHVLS-------GHTNPVASVMCQPTDPQ 291 (460)
T ss_pred echhhhhH--HHhccccceeEEEeccccceeEEecCCcceEEEeeecccceEEEec-------CCCCcceeEEeecCCCc
Confidence 99999988 8899999999999999999999999999 99999999999998887 5589999999987 558
Q ss_pred EEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeE
Q psy12614 217 IITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSV 296 (708)
Q Consensus 217 l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~ 296 (708)
+++|+.|++|++||+..|+...++..|...|.+++..|....+++++.| .|+-|++.. |. ...
T Consensus 292 vit~S~D~tvrlWDl~agkt~~tlt~hkksvral~lhP~e~~fASas~d-nik~w~~p~--------g~--------f~~ 354 (460)
T KOG0285|consen 292 VITGSHDSTVRLWDLRAGKTMITLTHHKKSVRALCLHPKENLFASASPD-NIKQWKLPE--------GE--------FLQ 354 (460)
T ss_pred eEEecCCceEEEeeeccCceeEeeecccceeeEEecCCchhhhhccCCc-cceeccCCc--------cc--------hhh
Confidence 9999999999999999999999999999999999999999999999877 799999998 76 566
Q ss_pred EEeccccceEEEEEe-CCEEEEEcCCCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEEEcCCeEEEEEecCCCCC
Q psy12614 297 NRVIHEGDVKSLALH-GNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQST 375 (708)
Q Consensus 297 ~~~~~~~~v~~l~~~-~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~~ 375 (708)
.+.+|...|.+++.. ++.+++|+..|.+.+||.+++.-.+......
T Consensus 355 nlsgh~~iintl~~nsD~v~~~G~dng~~~fwdwksg~nyQ~~~t~v--------------------------------- 401 (460)
T KOG0285|consen 355 NLSGHNAIINTLSVNSDGVLVSGGDNGSIMFWDWKSGHNYQRGQTIV--------------------------------- 401 (460)
T ss_pred ccccccceeeeeeeccCceEEEcCCceEEEEEecCcCcccccccccc---------------------------------
Confidence 789999999999999 9999999999999999998764211110000
Q ss_pred CCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEEEc-CCceEEEEEEe
Q psy12614 376 DLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYST-ESCVRLHSLDL 433 (708)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~-d~~i~i~~~~~ 433 (708)
.|..+ .....|.+.+|...|..|+++. |.+|++|.-+.
T Consensus 402 ---------------qpGSl-----~sEagI~as~fDktg~rlit~eadKtIk~~keDe 440 (460)
T KOG0285|consen 402 ---------------QPGSL-----ESEAGIFASCFDKTGSRLITGEADKTIKMYKEDE 440 (460)
T ss_pred ---------------cCCcc-----ccccceeEEeecccCceEEeccCCcceEEEeccc
Confidence 00011 2346788999999999999965 99999998654
|
|
| >KOG0292|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-33 Score=278.61 Aligned_cols=518 Identities=13% Similarity=0.184 Sum_probs=362.0
Q ss_pred Cccceeeee-eeeccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEE
Q psy12614 10 TMGTYGVHN-IKFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFS 86 (708)
Q Consensus 10 ~~~~~~~~~-~~~~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s 86 (708)
.+++|++.. +.-|.+|.++|..++|+|.+.++++|+.|-.|++|+..+.+++. ++.||- .-|+.+.|+ -.+++|
T Consensus 34 QlWDYRM~tli~rFdeHdGpVRgv~FH~~qplFVSGGDDykIkVWnYk~rrclf-tL~GHl--DYVRt~~FHheyPWIlS 110 (1202)
T KOG0292|consen 34 QLWDYRMGTLIDRFDEHDGPVRGVDFHPTQPLFVSGGDDYKIKVWNYKTRRCLF-TLLGHL--DYVRTVFFHHEYPWILS 110 (1202)
T ss_pred eeehhhhhhHHhhhhccCCccceeeecCCCCeEEecCCccEEEEEecccceehh-hhcccc--ceeEEeeccCCCceEEE
Confidence 345566544 34588999999999999999999999999999999999999987 999999 999999999 889999
Q ss_pred EcCCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCC-----------------------
Q psy12614 87 GGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDE----------------------- 143 (708)
Q Consensus 87 ~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~----------------------- 143 (708)
++.|.+|+|||+++++++..+.+|..-|-|..|+|...++++++-|.+|++||+..-
T Consensus 111 ASDDQTIrIWNwqsr~~iavltGHnHYVMcAqFhptEDlIVSaSLDQTVRVWDisGLRkk~~~pg~~e~~~~~~~~~~dL 190 (1202)
T KOG0292|consen 111 ASDDQTIRIWNWQSRKCIAVLTGHNHYVMCAQFHPTEDLIVSASLDQTVRVWDISGLRKKNKAPGSLEDQMRGQQGNSDL 190 (1202)
T ss_pred ccCCCeEEEEeccCCceEEEEecCceEEEeeccCCccceEEEecccceEEEEeecchhccCCCCCCchhhhhccccchhh
Confidence 999999999999999999999999999999999999999999999999999999631
Q ss_pred ----cEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-E
Q psy12614 144 ----GLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-I 217 (708)
Q Consensus 144 ----~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l 217 (708)
..+....+.+|...|+-++|+|.-..+++|+.| .|++|.+..-+.... ...+ +|...|.++.|+|... +
T Consensus 191 fg~~DaVVK~VLEGHDRGVNwaAfhpTlpliVSG~DDRqVKlWrmnetKaWEv-Dtcr----gH~nnVssvlfhp~q~lI 265 (1202)
T KOG0292|consen 191 FGQTDAVVKHVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEV-DTCR----GHYNNVSSVLFHPHQDLI 265 (1202)
T ss_pred cCCcCeeeeeeecccccccceEEecCCcceEEecCCcceeeEEEeccccceee-hhhh----cccCCcceEEecCcccee
Confidence 234456788999999999999999999999999 999999875444332 2222 6699999999999764 8
Q ss_pred EEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEE
Q psy12614 218 ITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVN 297 (708)
Q Consensus 218 ~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~ 297 (708)
++.+.|++|++||+...+.++++.-..+....++..|..+++++| .|+-+.+|.++. ..
T Consensus 266 lSnsEDksirVwDm~kRt~v~tfrrendRFW~laahP~lNLfAAg-HDsGm~VFkleR--------Er------------ 324 (1202)
T KOG0292|consen 266 LSNSEDKSIRVWDMTKRTSVQTFRRENDRFWILAAHPELNLFAAG-HDSGMIVFKLER--------ER------------ 324 (1202)
T ss_pred EecCCCccEEEEecccccceeeeeccCCeEEEEEecCCcceeeee-cCCceEEEEEcc--------cC------------
Confidence 899999999999999999999998778899999999999877655 567778888875 11
Q ss_pred EeccccceEEEEEeCCEEEEEcCCCeEEEEeCCCCc---eeecCc---cCCCCceEEEEcCCcEEEEE---cCCeEEEEE
Q psy12614 298 RVIHEGDVKSLALHGNRLYSGGLDSYLSLSYYPPKT---LVKYPC---TLAQSTPVSLAKDIQHVLLQ---YTSHLELWS 368 (708)
Q Consensus 298 ~~~~~~~v~~l~~~~~~l~s~~~d~~i~iw~~~~~~---~~~~~~---~~~~~~~~~~s~~~~~l~~~---~~~~i~i~~ 368 (708)
.+.+.+++.|...- |..|+.+|+.+.. +..+.. ......++.++|....++.+ ..+.-.++.
T Consensus 325 --------pa~~v~~n~LfYvk-d~~i~~~d~~t~~d~~v~~lr~~g~~~~~~~smsYNpae~~vlics~~~n~~y~L~~ 395 (1202)
T KOG0292|consen 325 --------PAYAVNGNGLFYVK-DRFIRSYDLRTQKDTAVASLRRPGTLWQPPRSLSYNPAENAVLICSNLDNGEYELVQ 395 (1202)
T ss_pred --------ceEEEcCCEEEEEc-cceEEeeeccccccceeEeccCCCcccCCcceeeeccccCeEEEEeccCCCeEEEEE
Confidence 12344455555554 8899999998854 222221 22455678899987776665 455566666
Q ss_pred ecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEEE-cCCceEEEEEEecCCcceeEEeecCC
Q psy12614 369 LGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYS-TESCVRLHSLDLDGDKPQISRIKNLP 447 (708)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~ 447 (708)
+..... +.. ..... .......++-... +++.+.. ++..+.+-++..... ++ ++
T Consensus 396 ipk~~~----~~~------------~~~~~--~k~tG~~a~fvar-Nrfavl~k~~~~v~ik~l~N~vt----kk---l~ 449 (1202)
T KOG0292|consen 396 IPKDSD----GVS------------DGKDV--KKGTGEGALFVAR-NRFAVLDKSNEQVVIKNLKNKVT----KK---LL 449 (1202)
T ss_pred ecCccc----ccC------------Cchhh--hcCCCCceEEEEe-cceEEEEecCcceEEecccchhh----hc---cc
Confidence 654320 000 00000 0011112222222 2222222 245555555553111 11 22
Q ss_pred cccccceeEEEEEecCCCeEEEEecCCc-EEEecCCCeEEEEEecCCCCCccCcceEEEEECCCCcEEEEEecCCeEEEE
Q psy12614 448 APLFKSIFTHVLISADSTLLLAVSLNGP-LYIIDLSSLEIKYCVDPYKSNLMSDVISLVQMSECKQYIVCADRKSHVVIW 526 (708)
Q Consensus 448 ~~~~~~~i~~~~~s~d~~~l~~~~~dg~-i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw 526 (708)
.. .....+-+..+|.+|+ .+.++. ++++... +.+..++ ...+.-+.||+|..++|.-+ ..+|.|.
T Consensus 450 ~~---~~~~~IF~ag~g~lll-~~~~~v~lfdvQq~--~~~~si~-------~s~vkyvvws~dm~~vAll~-Kh~i~i~ 515 (1202)
T KOG0292|consen 450 LP---ESTDDIFYAGTGNLLL-RSPDSVTLFDVQQK--KKVGSIK-------VSKVKYVVWSNDMSRVALLS-KHTITIA 515 (1202)
T ss_pred Cc---ccccceeeccCccEEE-EcCCeEEEEEeecc--eEEEEEe-------cCceeEEEEcCccchhhhcc-cceEEEE
Confidence 11 1222366777777776 445555 8888766 5666665 55788999999999988875 5689999
Q ss_pred ECC-ceeeecCCCCCCceEEEEcCCCCEEEEEecCCcEEEEEcCCCCCCchhhhhhccCchhhhcCCCCeeEEEeCCCCC
Q psy12614 527 KNG-QHHASLPRYRKPSTAMAIHPTLSTLVTVYSDHRIVEFDLNRKAFTTFSRKLETNHPNEWLSRQLPVLGIEFDPQDS 605 (708)
Q Consensus 527 ~~~-~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~~~ 605 (708)
+.+ ...|.+. ..-.|.+-+|..+|=+|.+...- |+ |-+.+|... .+..-..+|.- +--.|+
T Consensus 516 ~kkL~l~~sih-Etiriksgawde~gVfiYtT~nH--ik-Yal~~GD~G------------IikTLd~~iyi--tkv~gn 577 (1202)
T KOG0292|consen 516 DKKLELLCSIH-ETIRIKSGAWDEDGVFIYTTLNH--IK-YALENGDSG------------IIKTLDKPIYI--TKVKGN 577 (1202)
T ss_pred ecchhheecch-heeEeeeceeccCceEEEEehhh--hh-hhhccCCcc------------eEEecccceEE--EEeeCC
Confidence 887 5555432 22357777887666555544321 11 222222211 01111122221 222477
Q ss_pred ceEEEEcCeeEEEEecCC
Q psy12614 606 SLIYLMDDSALCVINKNK 623 (708)
Q Consensus 606 ~l~~~~~d~~i~~wd~~~ 623 (708)
.++....|+.+.+.+++.
T Consensus 578 ~V~cl~rd~~~~~~~IDp 595 (1202)
T KOG0292|consen 578 KVFCLNRDGEIECLTIDP 595 (1202)
T ss_pred EEEEEecCCCeEEEeech
Confidence 777888888888888763
|
|
| >KOG0296|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-35 Score=261.36 Aligned_cols=333 Identities=16% Similarity=0.237 Sum_probs=261.3
Q ss_pred eEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEE
Q psy12614 102 NIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRV 180 (708)
Q Consensus 102 ~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~i 180 (708)
..+.+|..|...|.+++.+|+.+++|+|+.|..-.+|++.+++.. ..+.+|+..|.++.|+.||.+||+|.-+ .|+|
T Consensus 55 dS~~tF~~H~~svFavsl~P~~~l~aTGGgDD~AflW~~~~ge~~--~eltgHKDSVt~~~FshdgtlLATGdmsG~v~v 132 (399)
T KOG0296|consen 55 DSLVTFDKHTDSVFAVSLHPNNNLVATGGGDDLAFLWDISTGEFA--GELTGHKDSVTCCSFSHDGTLLATGDMSGKVLV 132 (399)
T ss_pred cceeehhhcCCceEEEEeCCCCceEEecCCCceEEEEEccCCcce--eEecCCCCceEEEEEccCceEEEecCCCccEEE
Confidence 356788899999999999999999999999999999999999976 7899999999999999999999999999 9999
Q ss_pred EEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEE
Q psy12614 181 WDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYL 259 (708)
Q Consensus 181 wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l 259 (708)
|...++.....+... -..+.-+.|+|.+. |++|+.||.+.+|.+.++...+.+.+|..++++=.|.|+|+++
T Consensus 133 ~~~stg~~~~~~~~e-------~~dieWl~WHp~a~illAG~~DGsvWmw~ip~~~~~kv~~Gh~~~ct~G~f~pdGKr~ 205 (399)
T KOG0296|consen 133 FKVSTGGEQWKLDQE-------VEDIEWLKWHPRAHILLAGSTDGSVWMWQIPSQALCKVMSGHNSPCTCGEFIPDGKRI 205 (399)
T ss_pred EEcccCceEEEeecc-------cCceEEEEecccccEEEeecCCCcEEEEECCCcceeeEecCCCCCcccccccCCCceE
Confidence 999999998888633 56788899999886 8899999999999999988899999999999999999999999
Q ss_pred EEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEecc-ccceEEEEEe--CCEEEEEcCCCeEEEEeCCCCceee
Q psy12614 260 YCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIH-EGDVKSLALH--GNRLYSGGLDSYLSLSYYPPKTLVK 336 (708)
Q Consensus 260 ~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~~~~~~ 336 (708)
+++..||+|++|+..+ |+ +...+..- .....++.++ +..++.|..++.+++
T Consensus 206 ~tgy~dgti~~Wn~kt--------g~--------p~~~~~~~e~~~~~~~~~~~~~~~~~~g~~e~~~~~---------- 259 (399)
T KOG0296|consen 206 LTGYDDGTIIVWNPKT--------GQ--------PLHKITQAEGLELPCISLNLAGSTLTKGNSEGVACG---------- 259 (399)
T ss_pred EEEecCceEEEEecCC--------Cc--------eeEEecccccCcCCccccccccceeEeccCCccEEE----------
Confidence 9999999999999999 65 33333211 1122233333 333333333332211
Q ss_pred cCccCCCCceEEEEcCCcEEEEEcCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCc
Q psy12614 337 YPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGK 416 (708)
Q Consensus 337 ~~~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~ 416 (708)
T Consensus 260 -------------------------------------------------------------------------------- 259 (399)
T KOG0296|consen 260 -------------------------------------------------------------------------------- 259 (399)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEEE-cCCceEEEEEEecCCcceeEEeecCCcccc-cceeEEEEEecCCCeEEEEecCCc--EEEecCCCeEEEEEecC
Q psy12614 417 YVAYS-TESCVRLHSLDLDGDKPQISRIKNLPAPLF-KSIFTHVLISADSTLLLAVSLNGP--LYIIDLSSLEIKYCVDP 492 (708)
Q Consensus 417 ~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~s~d~~~l~~~~~dg~--i~~~~~~~~~~~~~~~~ 492 (708)
++ ..|.+.. ...+.. ..+ .+.+.. ..+|.++.+|..-.+.|+|+-||+ ||++.... ....+.
T Consensus 260 ---~~~~sgKVv~--~~n~~~-~~l-----~~~~e~~~esve~~~~ss~lpL~A~G~vdG~i~iyD~a~~~--~R~~c~- 325 (399)
T KOG0296|consen 260 ---VNNGSGKVVN--CNNGTV-PEL-----KPSQEELDESVESIPSSSKLPLAACGSVDGTIAIYDLAAST--LRHICE- 325 (399)
T ss_pred ---EccccceEEE--ecCCCC-ccc-----cccchhhhhhhhhcccccccchhhcccccceEEEEecccch--hheecc-
Confidence 10 0111111 111000 011 122222 445555777778889999999999 88887662 223332
Q ss_pred CCCCccCcceEEEEECCCCcEEEEEecCCeEEEEECCceee--ecCCCCCCceEEEEcCCCCEEEEEecCCcEEEEEcC
Q psy12614 493 YKSNLMSDVISLVQMSECKQYIVCADRKSHVVIWKNGQHHA--SLPRYRKPSTAMAIHPTLSTLVTVYSDHRIVEFDLN 569 (708)
Q Consensus 493 ~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~--~~~~~~~~v~~l~~s~d~~~l~~~~~dg~i~vwd~~ 569 (708)
| ...|+.+.|-+ ..+|++++.+|.|+.||..++.+ ++.+|+.+|..++++|+.+++++++.|++.+||+++
T Consensus 326 ---h--e~~V~~l~w~~-t~~l~t~c~~g~v~~wDaRtG~l~~~y~GH~~~Il~f~ls~~~~~vvT~s~D~~a~VF~v~ 398 (399)
T KOG0296|consen 326 ---H--EDGVTKLKWLN-TDYLLTACANGKVRQWDARTGQLKFTYTGHQMGILDFALSPQKRLVVTVSDDNTALVFEVP 398 (399)
T ss_pred ---C--CCceEEEEEcC-cchheeeccCceEEeeeccccceEEEEecCchheeEEEEcCCCcEEEEecCCCeEEEEecC
Confidence 3 67899999988 78999999999999999996554 899999999999999999999999999999999875
|
|
| >KOG0281|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-37 Score=273.73 Aligned_cols=291 Identities=13% Similarity=0.288 Sum_probs=248.1
Q ss_pred eeeeeeccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEeCCEEEEEcCCCcEEE
Q psy12614 16 VHNIKFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWFNDRLFSGGLQGFVNE 95 (708)
Q Consensus 16 ~~~~~~~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~~~~l~s~~~d~~i~v 95 (708)
+.++.--......|.|+.+. ...+++|..|.+|+|||..+-.++. .+.||. ++|.|+.|..+.+++|+.|.+|++
T Consensus 187 ~~rinc~Se~skgVYClQYD--D~kiVSGlrDnTikiWD~n~~~c~~-~L~GHt--GSVLCLqyd~rviisGSSDsTvrv 261 (499)
T KOG0281|consen 187 LQRINCRSENSKGVYCLQYD--DEKIVSGLRDNTIKIWDKNSLECLK-ILTGHT--GSVLCLQYDERVIVSGSSDSTVRV 261 (499)
T ss_pred eeeecCCcccCCceEEEEec--chhhhcccccCceEEeccccHHHHH-hhhcCC--CcEEeeeccceEEEecCCCceEEE
Confidence 33333334456889999885 4469999999999999999988776 999999 999999999889999999999999
Q ss_pred EECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcE-EEEEecccccccEEEEEECCCCCEEEEec
Q psy12614 96 YDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGL-LYEKLLDRQQGRILCTAWHSSGDYLVTGC 174 (708)
Q Consensus 96 wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~-~~~~~~~~~~~~v~~~~~s~d~~~l~~~~ 174 (708)
||+++|+++.++-+|...|..+.|+. .++++++.|.++.+||+....- ...+.+.+|...|..+.|+ .+++++++
T Consensus 262 WDv~tge~l~tlihHceaVLhlrf~n--g~mvtcSkDrsiaVWdm~sps~it~rrVLvGHrAaVNvVdfd--~kyIVsAS 337 (499)
T KOG0281|consen 262 WDVNTGEPLNTLIHHCEAVLHLRFSN--GYMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD--DKYIVSAS 337 (499)
T ss_pred EeccCCchhhHHhhhcceeEEEEEeC--CEEEEecCCceeEEEeccCchHHHHHHHHhhhhhheeeeccc--cceEEEec
Confidence 99999999999999999999999985 4899999999999999986542 2235678999999999996 56999999
Q ss_pred CC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEE
Q psy12614 175 AA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTV 252 (708)
Q Consensus 175 ~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~ 252 (708)
.| +|++|+..+++.++.+. +|...|.|+.+. |+ +++|++|.+|++||++.|.+++.+.+|+.-|.++.|
T Consensus 338 gDRTikvW~~st~efvRtl~-------gHkRGIAClQYr--~rlvVSGSSDntIRlwdi~~G~cLRvLeGHEeLvRciRF 408 (499)
T KOG0281|consen 338 GDRTIKVWSTSTCEFVRTLN-------GHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF 408 (499)
T ss_pred CCceEEEEeccceeeehhhh-------cccccceehhcc--CeEEEecCCCceEEEEeccccHHHHHHhchHHhhhheee
Confidence 99 99999999999999886 447778887764 45 889999999999999999999999999999999999
Q ss_pred eCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEeCCEEEEEcCCCeEEEEeCCCC
Q psy12614 253 SEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALHGNRLYSGGLDSYLSLSYYPPK 332 (708)
Q Consensus 253 s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~s~~~d~~i~iw~~~~~ 332 (708)
. .+.+++|+.||+|++||+....+.....+ -..+..+..|++.|..+.|....+++++.|.+|.+||+.+.
T Consensus 409 d--~krIVSGaYDGkikvWdl~aaldpra~~~-------~~Cl~~lv~hsgRVFrLQFD~fqIvsssHddtILiWdFl~~ 479 (499)
T KOG0281|consen 409 D--NKRIVSGAYDGKIKVWDLQAALDPRAPAS-------TLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIWDFLNG 479 (499)
T ss_pred c--CceeeeccccceEEEEecccccCCccccc-------chHHHhhhhccceeEEEeecceEEEeccCCCeEEEEEcCCC
Confidence 5 56899999999999999998222211111 12445667899999999999999999999999999999765
Q ss_pred c
Q psy12614 333 T 333 (708)
Q Consensus 333 ~ 333 (708)
.
T Consensus 480 ~ 480 (499)
T KOG0281|consen 480 P 480 (499)
T ss_pred C
Confidence 4
|
|
| >KOG2048|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-32 Score=264.60 Aligned_cols=487 Identities=14% Similarity=0.140 Sum_probs=357.3
Q ss_pred CcEEEEEEe--CCEEEEEcCCCcEEEEECCCCeE-eEEEee-cCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEE
Q psy12614 72 NSIECLTWF--NDRLFSGGLQGFVNEYDMRRLNI-KSSTAV-TSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLY 147 (708)
Q Consensus 72 ~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~~~-~~~~~~-~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~ 147 (708)
.+|++|||+ .+.||.+-.+|.|.+|++..+=. ...+.+ ....|.+++|++ +..|++.+.+|.|.-||+.+++..
T Consensus 26 s~I~slA~s~kS~~lAvsRt~g~IEiwN~~~~w~~~~vi~g~~drsIE~L~W~e-~~RLFS~g~sg~i~EwDl~~lk~~- 103 (691)
T KOG2048|consen 26 SEIVSLAYSHKSNQLAVSRTDGNIEIWNLSNNWFLEPVIHGPEDRSIESLAWAE-GGRLFSSGLSGSITEWDLHTLKQK- 103 (691)
T ss_pred cceEEEEEeccCCceeeeccCCcEEEEccCCCceeeEEEecCCCCceeeEEEcc-CCeEEeecCCceEEEEecccCcee-
Confidence 899999999 88899999999999999988543 334443 356899999995 556788889999999999999987
Q ss_pred EEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCc
Q psy12614 148 EKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGF 225 (708)
Q Consensus 148 ~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~ 225 (708)
.......+.|.+++.+|.++.++.|+.| .+..++...++........ ...+.+.++.|.|++. +++|+.||.
T Consensus 104 -~~~d~~gg~IWsiai~p~~~~l~IgcddGvl~~~s~~p~~I~~~r~l~-----rq~sRvLslsw~~~~~~i~~Gs~Dg~ 177 (691)
T KOG2048|consen 104 -YNIDSNGGAIWSIAINPENTILAIGCDDGVLYDFSIGPDKITYKRSLM-----RQKSRVLSLSWNPTGTKIAGGSIDGV 177 (691)
T ss_pred -EEecCCCcceeEEEeCCccceEEeecCCceEEEEecCCceEEEEeecc-----cccceEEEEEecCCccEEEecccCce
Confidence 6677778999999999999999999999 8999999888887777665 3368999999999996 999999999
Q ss_pred EEEEeCCCCeeEEEee--------ccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEE
Q psy12614 226 VRFWDGKTGVQWSDVK--------THKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVN 297 (708)
Q Consensus 226 i~~wd~~~~~~~~~~~--------~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~ 297 (708)
|++||...+..+.... ....-|.++.|..++ .|++|+..|.|.+||... |. ....
T Consensus 178 Iriwd~~~~~t~~~~~~~~d~l~k~~~~iVWSv~~Lrd~-tI~sgDS~G~V~FWd~~~--------gT--------LiqS 240 (691)
T KOG2048|consen 178 IRIWDVKSGQTLHIITMQLDRLSKREPTIVWSVLFLRDS-TIASGDSAGTVTFWDSIF--------GT--------LIQS 240 (691)
T ss_pred EEEEEcCCCceEEEeeecccccccCCceEEEEEEEeecC-cEEEecCCceEEEEcccC--------cc--------hhhh
Confidence 9999999987766221 123456778887665 899999999999999998 76 6777
Q ss_pred EeccccceEEEEEe--CCEEEEEcCCCeEEEEeCCCCce-----eecCccCCCCceEEEEcCCcEEEE-EcCCeEEEEEe
Q psy12614 298 RVIHEGDVKSLALH--GNRLYSGGLDSYLSLSYYPPKTL-----VKYPCTLAQSTPVSLAKDIQHVLL-QYTSHLELWSL 369 (708)
Q Consensus 298 ~~~~~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~~~~-----~~~~~~~~~~~~~~~s~~~~~l~~-~~~~~i~i~~~ 369 (708)
...|.+.|.+++.. +++++++|.|+.+..+...+..- .....+.....+++..++ .+++ +.|..+.+-..
T Consensus 241 ~~~h~adVl~Lav~~~~d~vfsaGvd~~ii~~~~~~~~~~wv~~~~r~~h~hdvrs~av~~~--~l~sgG~d~~l~i~~s 318 (691)
T KOG2048|consen 241 HSCHDADVLALAVADNEDRVFSAGVDPKIIQYSLTTNKSEWVINSRRDLHAHDVRSMAVIEN--ALISGGRDFTLAICSS 318 (691)
T ss_pred hhhhhcceeEEEEcCCCCeEEEccCCCceEEEEecCCccceeeeccccCCcccceeeeeecc--eEEecceeeEEEEccc
Confidence 88899999999999 79999999999999998877631 111123445567777776 3333 46666655444
Q ss_pred cCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEEEcCCceEEEEEEecC--Cc---ceeEEee
Q psy12614 370 GSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYSTESCVRLHSLDLDG--DK---PQISRIK 444 (708)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~d~~i~i~~~~~~~--~~---~~~~~~~ 444 (708)
..... ........ ..... -+...|..+++..-.+..+.+|.+...- +. ..+-++.
T Consensus 319 ~~~~~-----------------~~h~~~~~-~p~~~--~v~~a~~~~L~~~w~~h~v~lwrlGS~~~~g~~~~~~Llkl~ 378 (691)
T KOG2048|consen 319 REFKN-----------------MDHRQKNL-FPASD--RVSVAPENRLLVLWKAHGVDLWRLGSVILQGEYNYIHLLKLF 378 (691)
T ss_pred cccCc-----------------hhhhcccc-ccccc--eeecCccceEEEEeccccccceeccCcccccccChhhheeee
Confidence 33110 00000000 00111 1233444444444557778888876531 01 1111111
Q ss_pred cCCcccccceeEEEEEecCCCeEEEEecCCc-EEEecCCCeEEEEEecCCCCCccCcceEEEEECCCCcEEEEEe-cCCe
Q psy12614 445 NLPAPLFKSIFTHVLISADSTLLLAVSLNGP-LYIIDLSSLEIKYCVDPYKSNLMSDVISLVQMSECKQYIVCAD-RKSH 522 (708)
Q Consensus 445 ~~~~~~~~~~i~~~~~s~d~~~l~~~~~dg~-i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-~d~~ 522 (708)
+++ ...|+|.+.||||++++.+.-... ||.+.......+......... ......+.|+-|+..++.++ ....
T Consensus 379 -~k~---~~nIs~~aiSPdg~~Ia~st~~~~~iy~L~~~~~vk~~~v~~~~~~--~~~a~~i~ftid~~k~~~~s~~~~~ 452 (691)
T KOG2048|consen 379 -TKE---KENISCAAISPDGNLIAISTVSRTKIYRLQPDPNVKVINVDDVPLA--LLDASAISFTIDKNKLFLVSKNIFS 452 (691)
T ss_pred -cCC---ccceeeeccCCCCCEEEEeeccceEEEEeccCcceeEEEeccchhh--hccceeeEEEecCceEEEEecccce
Confidence 233 346888999999999999887777 999976543333333333322 44677889999998888887 6778
Q ss_pred EEEEECCceee----e--cCCCCCCceEEEEcCCCCEEEEEecCCcEEEEEcCCCCCCchhhhhhccCchhhhcCCCCee
Q psy12614 523 VVIWKNGQHHA----S--LPRYRKPSTAMAIHPTLSTLVTVYSDHRIVEFDLNRKAFTTFSRKLETNHPNEWLSRQLPVL 596 (708)
Q Consensus 523 i~iw~~~~~~~----~--~~~~~~~v~~l~~s~d~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 596 (708)
+.+.+++++.. . -.+--..|..+..||+|++||+.+.+|.|.+|++++.+... +. ..-...|+
T Consensus 453 le~~el~~ps~kel~~~~~~~~~~~I~~l~~SsdG~yiaa~~t~g~I~v~nl~~~~~~~--------l~---~rln~~vT 521 (691)
T KOG2048|consen 453 LEEFELETPSFKELKSIQSQAKCPSISRLVVSSDGNYIAAISTRGQIFVYNLETLESHL--------LK---VRLNIDVT 521 (691)
T ss_pred eEEEEecCcchhhhhccccccCCCcceeEEEcCCCCEEEEEeccceEEEEEcccceeec--------ch---hccCccee
Confidence 88888873221 1 11234689999999999999999999999999999987651 11 12336799
Q ss_pred EEEeCC-CCCceEEEEcCeeEEEEecC
Q psy12614 597 GIEFDP-QDSSLIYLMDDSALCVINKN 622 (708)
Q Consensus 597 ~l~~s~-~~~~l~~~~~d~~i~~wd~~ 622 (708)
.++|+| +.+.|+.+..++.+.-+|++
T Consensus 522 a~~~~~~~~~~lvvats~nQv~efdi~ 548 (691)
T KOG2048|consen 522 AAAFSPFVRNRLVVATSNNQVFEFDIE 548 (691)
T ss_pred eeeccccccCcEEEEecCCeEEEEecc
Confidence 999995 56789999999999999994
|
|
| >KOG0284|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-37 Score=278.71 Aligned_cols=279 Identities=18% Similarity=0.300 Sum_probs=245.8
Q ss_pred CCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECCCCe
Q psy12614 25 EPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMRRLN 102 (708)
Q Consensus 25 h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~~ 102 (708)
-...|..+.|.|+|+.|++|+..|.+.+|+..+-... ..++.|. .+|+++.|+ +.+++||+.+|.|++|+..-..
T Consensus 95 vkc~V~~v~WtPeGRRLltgs~SGEFtLWNg~~fnFE-tilQaHD--s~Vr~m~ws~~g~wmiSgD~gG~iKyWqpnmnn 171 (464)
T KOG0284|consen 95 VKCPVNVVRWTPEGRRLLTGSQSGEFTLWNGTSFNFE-TILQAHD--SPVRTMKWSHNGTWMISGDKGGMIKYWQPNMNN 171 (464)
T ss_pred cccceeeEEEcCCCceeEeecccccEEEecCceeeHH-HHhhhhc--ccceeEEEccCCCEEEEcCCCceEEecccchhh
Confidence 3567999999999999999999999999998654333 3778999 999999999 9999999999999999976644
Q ss_pred EeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEE
Q psy12614 103 IKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVW 181 (708)
Q Consensus 103 ~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iw 181 (708)
.......|...|++++|+|+...++++++||+|+|||....+.. ..+.+|.-.|.++.|+|....|++++.| .|++|
T Consensus 172 Vk~~~ahh~eaIRdlafSpnDskF~t~SdDg~ikiWdf~~~kee--~vL~GHgwdVksvdWHP~kgLiasgskDnlVKlW 249 (464)
T KOG0284|consen 172 VKIIQAHHAEAIRDLAFSPNDSKFLTCSDDGTIKIWDFRMPKEE--RVLRGHGWDVKSVDWHPTKGLIASGSKDNLVKLW 249 (464)
T ss_pred hHHhhHhhhhhhheeccCCCCceeEEecCCCeEEEEeccCCchh--heeccCCCCcceeccCCccceeEEccCCceeEee
Confidence 44334455599999999999999999999999999999877765 6789999999999999999999999999 99999
Q ss_pred EcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCC-CEE
Q psy12614 182 DIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDE-NYL 259 (708)
Q Consensus 182 d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~-~~l 259 (708)
|.++|.++.++. .|...|..+.|+|++. |++++.|..++++|+++.+.+.++++|...+++++|+|-. .+|
T Consensus 250 DprSg~cl~tlh-------~HKntVl~~~f~~n~N~Llt~skD~~~kv~DiR~mkEl~~~r~Hkkdv~~~~WhP~~~~lf 322 (464)
T KOG0284|consen 250 DPRSGSCLATLH-------GHKNTVLAVKFNPNGNWLLTGSKDQSCKVFDIRTMKELFTYRGHKKDVTSLTWHPLNESLF 322 (464)
T ss_pred cCCCcchhhhhh-------hccceEEEEEEcCCCCeeEEccCCceEEEEehhHhHHHHHhhcchhhheeeccccccccce
Confidence 999999998886 4589999999999996 9999999999999999999999999999999999999954 678
Q ss_pred EEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEEEcCCCeEEEEeCC
Q psy12614 260 YCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSGGLDSYLSLSYYP 330 (708)
Q Consensus 260 ~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~ 330 (708)
.+|+.||.|..|.+.. .+ .....-..|...|++++|+ |..|++|+.|.++++|.-.
T Consensus 323 tsgg~Dgsvvh~~v~~--------~~-------p~~~i~~AHd~~iwsl~~hPlGhil~tgsnd~t~rfw~r~ 380 (464)
T KOG0284|consen 323 TSGGSDGSVVHWVVGL--------EE-------PLGEIPPAHDGEIWSLAYHPLGHILATGSNDRTVRFWTRN 380 (464)
T ss_pred eeccCCCceEEEeccc--------cc-------cccCCCcccccceeeeeccccceeEeecCCCcceeeeccC
Confidence 8899999999999974 21 0123345789999999999 9999999999999999753
|
|
| >KOG0645|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-34 Score=244.92 Aligned_cols=290 Identities=15% Similarity=0.240 Sum_probs=238.5
Q ss_pred EEEecCCCCCcEEEEEEe-C--CEEEEEcCCCcEEEEECCCC---eEeEEEe-ecCCceEEEEEecCCCEEEEEeCCCcE
Q psy12614 63 RVFIGDPLSNSIECLTWF-N--DRLFSGGLQGFVNEYDMRRL---NIKSSTA-VTSGTCWCLSVHKKKRLLAAGTEQGHI 135 (708)
Q Consensus 63 ~~~~~h~~~~~v~~l~~~-~--~~l~s~~~d~~i~vwd~~~~---~~~~~~~-~~~~~v~~~~~s~~~~~la~~~~d~~i 135 (708)
+.+++|. +.+..++|+ + ..||+++.|..|++|+...+ .+...+. +|...|+++||+|.|++||+|+.|.++
T Consensus 8 ~~~~gh~--~r~W~~awhp~~g~ilAscg~Dk~vriw~~~~~~s~~ck~vld~~hkrsVRsvAwsp~g~~La~aSFD~t~ 85 (312)
T KOG0645|consen 8 QKLSGHK--DRVWSVAWHPGKGVILASCGTDKAVRIWSTSSGDSWTCKTVLDDGHKRSVRSVAWSPHGRYLASASFDATV 85 (312)
T ss_pred EeecCCC--CcEEEEEeccCCceEEEeecCCceEEEEecCCCCcEEEEEeccccchheeeeeeecCCCcEEEEeeccceE
Confidence 4889999 899999999 4 48999999999999999853 3444443 899999999999999999999999999
Q ss_pred EEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccC
Q psy12614 136 NLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCAD 214 (708)
Q Consensus 136 ~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 214 (708)
.||.-..++......+.+|+..|.+++|+++|.+||++++| .|-||.+..+........-. .|...|..+.|+|.
T Consensus 86 ~Iw~k~~~efecv~~lEGHEnEVK~Vaws~sG~~LATCSRDKSVWiWe~deddEfec~aVL~----~HtqDVK~V~WHPt 161 (312)
T KOG0645|consen 86 VIWKKEDGEFECVATLEGHENEVKCVAWSASGNYLATCSRDKSVWIWEIDEDDEFECIAVLQ----EHTQDVKHVIWHPT 161 (312)
T ss_pred EEeecCCCceeEEeeeeccccceeEEEEcCCCCEEEEeeCCCeEEEEEecCCCcEEEEeeec----cccccccEEEEcCC
Confidence 99999888887779999999999999999999999999999 99999998655544443332 55889999999996
Q ss_pred C-EEEEEcCCCcEEEEeCC---CCeeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCc
Q psy12614 215 F-TIITGDSGGFVRFWDGK---TGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSS 290 (708)
Q Consensus 215 ~-~l~~~~~dg~i~~wd~~---~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~ 290 (708)
. .|++++.|.+|++|+-. ...+++++.+|...|.+++|++.|.+|++++.|++++||.... +
T Consensus 162 ~dlL~S~SYDnTIk~~~~~~dddW~c~~tl~g~~~TVW~~~F~~~G~rl~s~sdD~tv~Iw~~~~--------~------ 227 (312)
T KOG0645|consen 162 EDLLFSCSYDNTIKVYRDEDDDDWECVQTLDGHENTVWSLAFDNIGSRLVSCSDDGTVSIWRLYT--------D------ 227 (312)
T ss_pred cceeEEeccCCeEEEEeecCCCCeeEEEEecCccceEEEEEecCCCceEEEecCCcceEeeeecc--------C------
Confidence 6 59999999999999866 3468899999999999999999999999999999999998665 2
Q ss_pred ceEEeEEEeccccceEEEEEeCCEEEEEcCCCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEEEcCCeEEEEEec
Q psy12614 291 VWVRSVNRVIHEGDVKSLALHGNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSLG 370 (708)
Q Consensus 291 ~~~~~~~~~~~~~~v~~l~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~ 370 (708)
.-..|...+..++|....|++++.|+.|+++.-.... ++ -.|+
T Consensus 228 ------~~~~~sr~~Y~v~W~~~~IaS~ggD~~i~lf~~s~~~------------------d~-----------p~~~-- 270 (312)
T KOG0645|consen 228 ------LSGMHSRALYDVPWDNGVIASGGGDDAIRLFKESDSP------------------DE-----------PSWN-- 270 (312)
T ss_pred ------cchhcccceEeeeecccceEeccCCCEEEEEEecCCC------------------CC-----------chHH--
Confidence 1235778889999998899999999999997653210 00 0010
Q ss_pred CCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCC-CcEEEE-EcCCceEEEEEE
Q psy12614 371 SAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSND-GKYVAY-STESCVRLHSLD 432 (708)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~-g~~l~~-~~d~~i~i~~~~ 432 (708)
.+......|...|.+++|.|. ..+|++ |+||.+++|.+.
T Consensus 271 -----------------------l~~~~~~aHe~dVNsV~w~p~~~~~L~s~~DDG~v~~W~l~ 311 (312)
T KOG0645|consen 271 -----------------------LLAKKEGAHEVDVNSVQWNPKVSNRLASGGDDGIVNFWELE 311 (312)
T ss_pred -----------------------HHHhhhcccccccceEEEcCCCCCceeecCCCceEEEEEec
Confidence 112233467778999999994 455665 669999999875
|
|
| >KOG0265|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-34 Score=249.45 Aligned_cols=280 Identities=17% Similarity=0.262 Sum_probs=245.4
Q ss_pred eccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEEC
Q psy12614 21 FYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDM 98 (708)
Q Consensus 21 ~~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~ 98 (708)
.+.+|++.|..+.|+|+|.+||+|+.|..|.+|++.....-...+.+|. +.|..+.|. ++.|++++.|.+|+.||+
T Consensus 42 ~l~gh~geI~~~~F~P~gs~~aSgG~Dr~I~LWnv~gdceN~~~lkgHs--gAVM~l~~~~d~s~i~S~gtDk~v~~wD~ 119 (338)
T KOG0265|consen 42 LLPGHKGEIYTIKFHPDGSCFASGGSDRAIVLWNVYGDCENFWVLKGHS--GAVMELHGMRDGSHILSCGTDKTVRGWDA 119 (338)
T ss_pred hcCCCcceEEEEEECCCCCeEeecCCcceEEEEeccccccceeeecccc--ceeEeeeeccCCCEEEEecCCceEEEEec
Confidence 4789999999999999999999999999999999765444344888999 999999999 999999999999999999
Q ss_pred CCCeEeEEEeecCCceEEEEEecCCC-EEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-
Q psy12614 99 RRLNIKSSTAVTSGTCWCLSVHKKKR-LLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA- 176 (708)
Q Consensus 99 ~~~~~~~~~~~~~~~v~~~~~s~~~~-~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d- 176 (708)
++|++.+.+++|...|+++.-+.-|. ++.+++.|+++++||++..+.+ +.+ ..+..++++.|..++..+.+|+-|
T Consensus 120 ~tG~~~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~--~t~-~~kyqltAv~f~d~s~qv~sggIdn 196 (338)
T KOG0265|consen 120 ETGKRIRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEAI--KTF-ENKYQLTAVGFKDTSDQVISGGIDN 196 (338)
T ss_pred ccceeeehhccccceeeecCccccCCeEEEecCCCceEEEEeecccchh--hcc-ccceeEEEEEecccccceeeccccC
Confidence 99999999999999999999655555 5567889999999999988775 333 346779999999999999999999
Q ss_pred eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCC----eeEEEeeccc----cCe
Q psy12614 177 AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTG----VQWSDVKTHK----KDI 247 (708)
Q Consensus 177 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~----~~~~~~~~~~----~~i 247 (708)
.|++||++.+.....+. +|...|+.+..+|+|. +++-+.|.++++||.+.. +++..+.+|. ...
T Consensus 197 ~ikvWd~r~~d~~~~ls-------Gh~DtIt~lsls~~gs~llsnsMd~tvrvwd~rp~~p~~R~v~if~g~~hnfeknl 269 (338)
T KOG0265|consen 197 DIKVWDLRKNDGLYTLS-------GHADTITGLSLSRYGSFLLSNSMDNTVRVWDVRPFAPSQRCVKIFQGHIHNFEKNL 269 (338)
T ss_pred ceeeeccccCcceEEee-------cccCceeeEEeccCCCccccccccceEEEEEecccCCCCceEEEeecchhhhhhhc
Confidence 99999999999988887 5599999999999996 888999999999998753 4467776653 345
Q ss_pred EEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEEEcCCCeEE
Q psy12614 248 LALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSGGLDSYLS 325 (708)
Q Consensus 248 ~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~~~d~~i~ 325 (708)
...+|+|+++.+.+|+.|+.+++||... .. .+..+.+|.+.|.++.|+ ...|.+++.|.+|.
T Consensus 270 L~cswsp~~~~i~ags~dr~vyvwd~~~--------r~--------~lyklpGh~gsvn~~~Fhp~e~iils~~sdk~i~ 333 (338)
T KOG0265|consen 270 LKCSWSPNGTKITAGSADRFVYVWDTTS--------RR--------ILYKLPGHYGSVNEVDFHPTEPIILSCSSDKTIY 333 (338)
T ss_pred ceeeccCCCCccccccccceEEEeeccc--------cc--------EEEEcCCcceeEEEeeecCCCcEEEEeccCceeE
Confidence 6789999999999999999999999987 43 678899999999999999 88999999999997
Q ss_pred EEe
Q psy12614 326 LSY 328 (708)
Q Consensus 326 iw~ 328 (708)
+=.
T Consensus 334 lge 336 (338)
T KOG0265|consen 334 LGE 336 (338)
T ss_pred eec
Confidence 643
|
|
| >KOG0266|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-34 Score=292.85 Aligned_cols=282 Identities=19% Similarity=0.327 Sum_probs=250.1
Q ss_pred cCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCC--eEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEEC
Q psy12614 23 APEPKVINCIACEPKSSRLAVSRADQSIEIWDISETP--HVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDM 98 (708)
Q Consensus 23 ~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~--~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~ 98 (708)
..|...|+|+.|+|+|++|++++.++.+++|+..+.+ .+. .+.+|. ..|..++|+ +.++++++.|++|++||+
T Consensus 156 ~~~~~sv~~~~fs~~g~~l~~~~~~~~i~~~~~~~~~~~~~~-~l~~h~--~~v~~~~fs~d~~~l~s~s~D~tiriwd~ 232 (456)
T KOG0266|consen 156 GHECPSVTCVDFSPDGRALAAASSDGLIRIWKLEGIKSNLLR-ELSGHT--RGVSDVAFSPDGSYLLSGSDDKTLRIWDL 232 (456)
T ss_pred ccccCceEEEEEcCCCCeEEEccCCCcEEEeecccccchhhc-cccccc--cceeeeEECCCCcEEEEecCCceEEEeec
Confidence 3448999999999999999999999999999997777 444 678999 999999999 889999999999999999
Q ss_pred -CCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-
Q psy12614 99 -RRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA- 176 (708)
Q Consensus 99 -~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d- 176 (708)
..+..++++.+|...|++++|+|+++++++|+.|++|++||++++++. ..+.+|.+.|.+++|++++++|++++.|
T Consensus 233 ~~~~~~~~~l~gH~~~v~~~~f~p~g~~i~Sgs~D~tvriWd~~~~~~~--~~l~~hs~~is~~~f~~d~~~l~s~s~d~ 310 (456)
T KOG0266|consen 233 KDDGRNLKTLKGHSTYVTSVAFSPDGNLLVSGSDDGTVRIWDVRTGECV--RKLKGHSDGISGLAFSPDGNLLVSASYDG 310 (456)
T ss_pred cCCCeEEEEecCCCCceEEEEecCCCCEEEEecCCCcEEEEeccCCeEE--EeeeccCCceEEEEECCCCCEEEEcCCCc
Confidence 566899999999999999999999999999999999999999999888 8999999999999999999999999999
Q ss_pred eEEEEEcCCCce--EEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCeeEEEeeccccCe---EEE
Q psy12614 177 AVRVWDIHKGHA--IHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDVKTHKKDI---LAL 250 (708)
Q Consensus 177 ~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i---~~~ 250 (708)
.|++||+.++.. ...+.... ... +++++.|+|++. ++++..|+.+++||+..+.....+.+|...+ .+.
T Consensus 311 ~i~vwd~~~~~~~~~~~~~~~~----~~~-~~~~~~fsp~~~~ll~~~~d~~~~~w~l~~~~~~~~~~~~~~~~~~~~~~ 385 (456)
T KOG0266|consen 311 TIRVWDLETGSKLCLKLLSGAE----NSA-PVTSVQFSPNGKYLLSASLDRTLKLWDLRSGKSVGTYTGHSNLVRCIFSP 385 (456)
T ss_pred cEEEEECCCCceeeeecccCCC----CCC-ceeEEEECCCCcEEEEecCCCeEEEEEccCCcceeeecccCCcceeEecc
Confidence 999999999994 45544332 113 799999999996 8899999999999999999999998888753 344
Q ss_pred EEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEecc-ccceEEEEEe--CCEEEEEc--CCCeEE
Q psy12614 251 TVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIH-EGDVKSLALH--GNRLYSGG--LDSYLS 325 (708)
Q Consensus 251 ~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~v~~l~~~--~~~l~s~~--~d~~i~ 325 (708)
..++.+.++++|+.|+.|.+|+..+ +. ....+.+| ...+..+.++ .+++++++ .|+.++
T Consensus 386 ~~~~~~~~i~sg~~d~~v~~~~~~s--------~~--------~~~~l~~h~~~~~~~~~~~~~~~~~~s~s~~~d~~~~ 449 (456)
T KOG0266|consen 386 TLSTGGKLIYSGSEDGSVYVWDSSS--------GG--------ILQRLEGHSKAAVSDLSSHPTENLIASSSFEGDGLIR 449 (456)
T ss_pred cccCCCCeEEEEeCCceEEEEeCCc--------cc--------hhhhhcCCCCCceeccccCCCcCeeeecCcCCCceEE
Confidence 5578899999999999999999998 55 56777888 8888999998 78888888 789999
Q ss_pred EEeCC
Q psy12614 326 LSYYP 330 (708)
Q Consensus 326 iw~~~ 330 (708)
+|..+
T Consensus 450 ~w~~~ 454 (456)
T KOG0266|consen 450 LWKYD 454 (456)
T ss_pred EecCC
Confidence 99764
|
|
| >KOG0295|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-35 Score=260.10 Aligned_cols=280 Identities=14% Similarity=0.194 Sum_probs=250.5
Q ss_pred EEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEc
Q psy12614 63 RVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQI 140 (708)
Q Consensus 63 ~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~ 140 (708)
..+.+|. .+|+.+-|. -..+++++.|++|++||..++++...+++|...+..++|+..|++||+++.|-.+++||.
T Consensus 102 ~~l~g~r--~~vt~v~~hp~~~~v~~as~d~tikv~D~~tg~~e~~LrGHt~sv~di~~~a~Gk~l~tcSsDl~~~LWd~ 179 (406)
T KOG0295|consen 102 QKLAGHR--SSVTRVIFHPSEALVVSASEDATIKVFDTETGELERSLRGHTDSVFDISFDASGKYLATCSSDLSAKLWDF 179 (406)
T ss_pred hhhhccc--cceeeeeeccCceEEEEecCCceEEEEEccchhhhhhhhccccceeEEEEecCccEEEecCCccchhheeH
Confidence 3677888 999999999 556778889999999999999999999999999999999999999999999999999999
Q ss_pred cCC-cEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-E
Q psy12614 141 SDE-GLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-I 217 (708)
Q Consensus 141 ~~~-~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l 217 (708)
++. ++. +.+.+|+..|.+++|-|.|.+|++++.| +|+.|++.+|.++.++..+ ...|..+..+.||+ +
T Consensus 180 ~~~~~c~--ks~~gh~h~vS~V~f~P~gd~ilS~srD~tik~We~~tg~cv~t~~~h-------~ewvr~v~v~~DGti~ 250 (406)
T KOG0295|consen 180 DTFFRCI--KSLIGHEHGVSSVFFLPLGDHILSCSRDNTIKAWECDTGYCVKTFPGH-------SEWVRMVRVNQDGTII 250 (406)
T ss_pred HHHHHHH--HHhcCcccceeeEEEEecCCeeeecccccceeEEecccceeEEeccCc-------hHhEEEEEecCCeeEE
Confidence 873 333 6788999999999999999999999999 9999999999999999844 78999999999997 8
Q ss_pred EEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCC---------------CCEEEEEecCCeEEEEEccCCcccccC
Q psy12614 218 ITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSED---------------ENYLYCAGVDPTVVCFQRTRKPQVCST 282 (708)
Q Consensus 218 ~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~---------------~~~l~~~~~dg~i~iw~~~~~~~~~~~ 282 (708)
++++.|.+|++|-+.++++...+..|+.+|.+++|.|. +.++++++.|++|++||+.+
T Consensus 251 As~s~dqtl~vW~~~t~~~k~~lR~hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~t------- 323 (406)
T KOG0295|consen 251 ASCSNDQTLRVWVVATKQCKAELREHEHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVST------- 323 (406)
T ss_pred EecCCCceEEEEEeccchhhhhhhccccceEEEEecccccCcchhhccCCCCCccEEEeecccceEEEEeccC-------
Confidence 89999999999999999999999999999999999763 25899999999999999999
Q ss_pred CCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEEEcCCCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEEEc
Q psy12614 283 SGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQY 360 (708)
Q Consensus 283 ~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~ 360 (708)
|. .+.++.+|...|+.++|+ |++|+++..|+++++||+.+..
T Consensus 324 -g~--------cL~tL~ghdnwVr~~af~p~Gkyi~ScaDDktlrvwdl~~~~--------------------------- 367 (406)
T KOG0295|consen 324 -GM--------CLFTLVGHDNWVRGVAFSPGGKYILSCADDKTLRVWDLKNLQ--------------------------- 367 (406)
T ss_pred -Ce--------EEEEEecccceeeeeEEcCCCeEEEEEecCCcEEEEEeccce---------------------------
Confidence 76 889999999999999999 9999999999999999987654
Q ss_pred CCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEEEc-CCceEEEE
Q psy12614 361 TSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYST-ESCVRLHS 430 (708)
Q Consensus 361 ~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~-d~~i~i~~ 430 (708)
.......|..-++++.|..+..++++|. |.++++|.
T Consensus 368 ----------------------------------cmk~~~ah~hfvt~lDfh~~~p~VvTGsVdqt~KvwE 404 (406)
T KOG0295|consen 368 ----------------------------------CMKTLEAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 404 (406)
T ss_pred ----------------------------------eeeccCCCcceeEEEecCCCCceEEeccccceeeeee
Confidence 2223335677788899988888888877 99999886
|
|
| >KOG0293|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-35 Score=264.65 Aligned_cols=288 Identities=11% Similarity=0.157 Sum_probs=247.6
Q ss_pred eeeeeeeccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCe--EEEEEecCCCCCcEEEEEEe--CCEEEEEcCC
Q psy12614 15 GVHNIKFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPH--VDRVFIGDPLSNSIECLTWF--NDRLFSGGLQ 90 (708)
Q Consensus 15 ~~~~~~~~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~--~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d 90 (708)
..+..+++..|++.|--+.||++|+|||+++.|.+..||++..... +.+++.||. .+|..+.|| .++|++++.|
T Consensus 213 p~qt~qil~~htdEVWfl~FS~nGkyLAsaSkD~Taiiw~v~~d~~~kl~~tlvgh~--~~V~yi~wSPDdryLlaCg~~ 290 (519)
T KOG0293|consen 213 PSQTWQILQDHTDEVWFLQFSHNGKYLASASKDSTAIIWIVVYDVHFKLKKTLVGHS--QPVSYIMWSPDDRYLLACGFD 290 (519)
T ss_pred CchhhhhHhhCCCcEEEEEEcCCCeeEeeccCCceEEEEEEecCcceeeeeeeeccc--CceEEEEECCCCCeEEecCch
Confidence 3455677899999999999999999999999999999999876443 345899999 999999999 8999999999
Q ss_pred CcEEEEECCCCeEeEEEe-ecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccc-cccEEEEEECCCCC
Q psy12614 91 GFVNEYDMRRLNIKSSTA-VTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQ-QGRILCTAWHSSGD 168 (708)
Q Consensus 91 ~~i~vwd~~~~~~~~~~~-~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~-~~~v~~~~~s~d~~ 168 (708)
..+.+||+.+|.+...+. ++...+.+++|.|||..+++|+.|+++..||++.... ....+. ...|.+++.++||+
T Consensus 291 e~~~lwDv~tgd~~~~y~~~~~~S~~sc~W~pDg~~~V~Gs~dr~i~~wdlDgn~~---~~W~gvr~~~v~dlait~Dgk 367 (519)
T KOG0293|consen 291 EVLSLWDVDTGDLRHLYPSGLGFSVSSCAWCPDGFRFVTGSPDRTIIMWDLDGNIL---GNWEGVRDPKVHDLAITYDGK 367 (519)
T ss_pred HheeeccCCcchhhhhcccCcCCCcceeEEccCCceeEecCCCCcEEEecCCcchh---hcccccccceeEEEEEcCCCc
Confidence 999999999999888776 4578899999999999999999999999999987654 233332 35699999999999
Q ss_pred EEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCeeEEEeeccccC
Q psy12614 169 YLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDVKTHKKD 246 (708)
Q Consensus 169 ~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~ 246 (708)
++++.+.| .|++++.++......+.. ..+|++++.+.|++ +++--.+..+++||++..+.++.+.||...
T Consensus 368 ~vl~v~~d~~i~l~~~e~~~dr~lise--------~~~its~~iS~d~k~~LvnL~~qei~LWDl~e~~lv~kY~Ghkq~ 439 (519)
T KOG0293|consen 368 YVLLVTVDKKIRLYNREARVDRGLISE--------EQPITSFSISKDGKLALVNLQDQEIHLWDLEENKLVRKYFGHKQG 439 (519)
T ss_pred EEEEEecccceeeechhhhhhhccccc--------cCceeEEEEcCCCcEEEEEcccCeeEEeecchhhHHHHhhccccc
Confidence 99999999 999999987666554432 78899999999998 556667899999999999999999888764
Q ss_pred e--EEEEEeC-CCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe---CCEEEEEcC
Q psy12614 247 I--LALTVSE-DENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH---GNRLYSGGL 320 (708)
Q Consensus 247 i--~~~~~s~-~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~---~~~l~s~~~ 320 (708)
- ..-+|-. +..++++|++|+.|+||+..+ |+ ++..+.+|...|.+++|+ ..++|+++.
T Consensus 440 ~fiIrSCFgg~~~~fiaSGSED~kvyIWhr~s--------gk--------ll~~LsGHs~~vNcVswNP~~p~m~ASasD 503 (519)
T KOG0293|consen 440 HFIIRSCFGGGNDKFIASGSEDSKVYIWHRIS--------GK--------LLAVLSGHSKTVNCVSWNPADPEMFASASD 503 (519)
T ss_pred ceEEEeccCCCCcceEEecCCCceEEEEEccC--------Cc--------eeEeecCCcceeeEEecCCCCHHHhhccCC
Confidence 3 3334433 447999999999999999999 88 899999999999999999 789999999
Q ss_pred CCeEEEEeCCC
Q psy12614 321 DSYLSLSYYPP 331 (708)
Q Consensus 321 d~~i~iw~~~~ 331 (708)
||+||||....
T Consensus 504 DgtIRIWg~~~ 514 (519)
T KOG0293|consen 504 DGTIRIWGPSD 514 (519)
T ss_pred CCeEEEecCCc
Confidence 99999998753
|
|
| >cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-33 Score=275.33 Aligned_cols=281 Identities=19% Similarity=0.341 Sum_probs=252.8
Q ss_pred eeccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEE
Q psy12614 20 KFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYD 97 (708)
Q Consensus 20 ~~~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd 97 (708)
+.+.+|++.|++++|+|++++|++++.||.|.+|++.++.... .+.+|. ..+..+.|+ ++.+++++.+|.|++||
T Consensus 3 ~~~~~h~~~i~~~~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~-~~~~~~--~~i~~~~~~~~~~~l~~~~~~~~i~i~~ 79 (289)
T cd00200 3 RTLKGHTGGVTCVAFSPDGKLLATGSGDGTIKVWDLETGELLR-TLKGHT--GPVRDVAASADGTYLASGSSDKTIRLWD 79 (289)
T ss_pred hHhcccCCCEEEEEEcCCCCEEEEeecCcEEEEEEeeCCCcEE-EEecCC--cceeEEEECCCCCEEEEEcCCCeEEEEE
Confidence 3567899999999999999999999999999999999887655 788888 899999999 67999999999999999
Q ss_pred CCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-
Q psy12614 98 MRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA- 176 (708)
Q Consensus 98 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d- 176 (708)
+.+++....+..|...+.++.|+++++++++++.++.|.+||+.+++.. ..+..|...+.+++|+|++.++++++.+
T Consensus 80 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~~~~~~~~~i~~~~~~~~~~~l~~~~~~~ 157 (289)
T cd00200 80 LETGECVRTLTGHTSYVSSVAFSPDGRILSSSSRDKTIKVWDVETGKCL--TTLRGHTDWVNSVAFSPDGTFVASSSQDG 157 (289)
T ss_pred cCcccceEEEeccCCcEEEEEEcCCCCEEEEecCCCeEEEEECCCcEEE--EEeccCCCcEEEEEEcCcCCEEEEEcCCC
Confidence 9998888899999999999999999888888888999999999987776 5667888999999999999999998867
Q ss_pred eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCC-EEEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCC
Q psy12614 177 AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADF-TIITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSED 255 (708)
Q Consensus 177 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~ 255 (708)
.|++||+.+++.+..+... ...+.+++|+|++ .+++++.+|.|++||+.+++.+..+..|...+.+++|+|+
T Consensus 158 ~i~i~d~~~~~~~~~~~~~-------~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~ 230 (289)
T cd00200 158 TIKLWDLRTGKCVATLTGH-------TGEVNSVAFSPDGEKLLSSSSDGTIKLWDLSTGKCLGTLRGHENGVNSVAFSPD 230 (289)
T ss_pred cEEEEEccccccceeEecC-------ccccceEEECCCcCEEEEecCCCcEEEEECCCCceecchhhcCCceEEEEEcCC
Confidence 9999999988888777633 6789999999999 5888888999999999999998888889999999999999
Q ss_pred CCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEEEcCCCeEEEEe
Q psy12614 256 ENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSGGLDSYLSLSY 328 (708)
Q Consensus 256 ~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~~~d~~i~iw~ 328 (708)
+.++++++.||.+++|++.+ ++ ....+..|...|.+++|+ +..+++++.|+.+++|+
T Consensus 231 ~~~~~~~~~~~~i~i~~~~~--------~~--------~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iw~ 289 (289)
T cd00200 231 GYLLASGSEDGTIRVWDLRT--------GE--------CVQTLSGHTNSVTSLAWSPDGKRLASGSADGTIRIWD 289 (289)
T ss_pred CcEEEEEcCCCcEEEEEcCC--------ce--------eEEEccccCCcEEEEEECCCCCEEEEecCCCeEEecC
Confidence 88888888899999999987 54 556667888999999999 68999999999999996
|
|
| >KOG0316|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-34 Score=240.10 Aligned_cols=280 Identities=13% Similarity=0.198 Sum_probs=244.4
Q ss_pred ceeeeeeeeccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCC
Q psy12614 13 TYGVHNIKFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQ 90 (708)
Q Consensus 13 ~~~~~~~~~~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d 90 (708)
++..++.+.+..|.++|.++.|+-||+|.++++.|.+|++||...+.+++ +..||. ..|..++.+ ...+++++.|
T Consensus 4 e~ptkr~~~l~~~qgaV~avryN~dGnY~ltcGsdrtvrLWNp~rg~lik-tYsghG--~EVlD~~~s~Dnskf~s~GgD 80 (307)
T KOG0316|consen 4 ELPTKRLSILDCAQGAVRAVRYNVDGNYCLTCGSDRTVRLWNPLRGALIK-TYSGHG--HEVLDAALSSDNSKFASCGGD 80 (307)
T ss_pred cCcchhceeecccccceEEEEEccCCCEEEEcCCCceEEeecccccceee-eecCCC--ceeeeccccccccccccCCCC
Confidence 45566778889999999999999999999999999999999999999987 999999 999999988 8899999999
Q ss_pred CcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEE
Q psy12614 91 GFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYL 170 (708)
Q Consensus 91 ~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l 170 (708)
..+.+||+++|+..+.+.+|.+.|++++|+.+...+++|+-|.++++||.+.....+.+.+......|.++..+ +..|
T Consensus 81 k~v~vwDV~TGkv~Rr~rgH~aqVNtV~fNeesSVv~SgsfD~s~r~wDCRS~s~ePiQildea~D~V~Si~v~--~heI 158 (307)
T KOG0316|consen 81 KAVQVWDVNTGKVDRRFRGHLAQVNTVRFNEESSVVASGSFDSSVRLWDCRSRSFEPIQILDEAKDGVSSIDVA--EHEI 158 (307)
T ss_pred ceEEEEEcccCeeeeecccccceeeEEEecCcceEEEeccccceeEEEEcccCCCCccchhhhhcCceeEEEec--ccEE
Confidence 99999999999999999999999999999999999999999999999999987766668888888899999986 6679
Q ss_pred EEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCeeEEEeeccccCe-
Q psy12614 171 VTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDVKTHKKDI- 247 (708)
Q Consensus 171 ~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i- 247 (708)
++|+.| +++.||++.|....... ..+|+++.|++|++ .++++.|+++++.|-.+|+.+..+++|...-
T Consensus 159 vaGS~DGtvRtydiR~G~l~sDy~---------g~pit~vs~s~d~nc~La~~l~stlrLlDk~tGklL~sYkGhkn~ey 229 (307)
T KOG0316|consen 159 VAGSVDGTVRTYDIRKGTLSSDYF---------GHPITSVSFSKDGNCSLASSLDSTLRLLDKETGKLLKSYKGHKNMEY 229 (307)
T ss_pred EeeccCCcEEEEEeecceeehhhc---------CCcceeEEecCCCCEEEEeeccceeeecccchhHHHHHhccccccee
Confidence 999999 99999999998766554 67899999999997 8889999999999999999999999987643
Q ss_pred -EEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccc-eEEEEEe--CCEEEEEcCCC
Q psy12614 248 -LALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGD-VKSLALH--GNRLYSGGLDS 322 (708)
Q Consensus 248 -~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-v~~l~~~--~~~l~s~~~d~ 322 (708)
...+++.....+++|++||.+++||+.. +. ....+..+... |.+++++ -..++++...+
T Consensus 230 kldc~l~qsdthV~sgSEDG~Vy~wdLvd--------~~--------~~sk~~~~~~v~v~dl~~hp~~~~f~~A~~~~ 292 (307)
T KOG0316|consen 230 KLDCCLNQSDTHVFSGSEDGKVYFWDLVD--------ET--------QISKLSVVSTVIVTDLSCHPTMDDFITATGHG 292 (307)
T ss_pred eeeeeecccceeEEeccCCceEEEEEecc--------ce--------eeeeeccCCceeEEeeecccCccceeEecCCc
Confidence 3456777778999999999999999998 54 45555556555 7888888 44455554433
|
|
| >KOG0284|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-35 Score=268.49 Aligned_cols=276 Identities=17% Similarity=0.291 Sum_probs=244.2
Q ss_pred CcEEEEEEe--CCEEEEEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEE
Q psy12614 72 NSIECLTWF--NDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEK 149 (708)
Q Consensus 72 ~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~ 149 (708)
.+|..+.|. |++|++|+..|.+.+|+..+-.....++.|..+|+++.|++++.++++|+.+|.|++|+..-... +
T Consensus 97 c~V~~v~WtPeGRRLltgs~SGEFtLWNg~~fnFEtilQaHDs~Vr~m~ws~~g~wmiSgD~gG~iKyWqpnmnnV---k 173 (464)
T KOG0284|consen 97 CPVNVVRWTPEGRRLLTGSQSGEFTLWNGTSFNFETILQAHDSPVRTMKWSHNGTWMISGDKGGMIKYWQPNMNNV---K 173 (464)
T ss_pred cceeeEEEcCCCceeEeecccccEEEecCceeeHHHHhhhhcccceeEEEccCCCEEEEcCCCceEEecccchhhh---H
Confidence 789999999 89999999999999999866555566779999999999999999999999999999999887666 4
Q ss_pred eccccc-ccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCC-EEEEEcCCCcE
Q psy12614 150 LLDRQQ-GRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADF-TIITGDSGGFV 226 (708)
Q Consensus 150 ~~~~~~-~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~~~~~dg~i 226 (708)
.+..|. ..|++++|+|+...+++++.| +|+|||....+....+. +|...|.++.|+|.- .+++++.|..|
T Consensus 174 ~~~ahh~eaIRdlafSpnDskF~t~SdDg~ikiWdf~~~kee~vL~-------GHgwdVksvdWHP~kgLiasgskDnlV 246 (464)
T KOG0284|consen 174 IIQAHHAEAIRDLAFSPNDSKFLTCSDDGTIKIWDFRMPKEERVLR-------GHGWDVKSVDWHPTKGLIASGSKDNLV 246 (464)
T ss_pred HhhHhhhhhhheeccCCCCceeEEecCCCeEEEEeccCCchhheec-------cCCCCcceeccCCccceeEEccCCcee
Confidence 555554 899999999999999999999 99999998888777774 458999999999965 69999999999
Q ss_pred EEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceE
Q psy12614 227 RFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVK 306 (708)
Q Consensus 227 ~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~ 306 (708)
++||.++|+++.++.+|+..|..+.|+|++++|++++.|..++++|+++ .+ .+..+++|...|+
T Consensus 247 KlWDprSg~cl~tlh~HKntVl~~~f~~n~N~Llt~skD~~~kv~DiR~--------mk--------El~~~r~Hkkdv~ 310 (464)
T KOG0284|consen 247 KLWDPRSGSCLATLHGHKNTVLAVKFNPNGNWLLTGSKDQSCKVFDIRT--------MK--------ELFTYRGHKKDVT 310 (464)
T ss_pred EeecCCCcchhhhhhhccceEEEEEEcCCCCeeEEccCCceEEEEehhH--------hH--------HHHHhhcchhhhe
Confidence 9999999999999999999999999999999999999999999999997 44 5678899999999
Q ss_pred EEEEe---CCEEEEEcCCCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEEEcCCeEEEEEecCCCCCCCCCCCCC
Q psy12614 307 SLALH---GNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNT 383 (708)
Q Consensus 307 ~l~~~---~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~~ 383 (708)
++.|+ .++|.+|+.||.|..|.+....
T Consensus 311 ~~~WhP~~~~lftsgg~Dgsvvh~~v~~~~-------------------------------------------------- 340 (464)
T KOG0284|consen 311 SLTWHPLNESLFTSGGSDGSVVHWVVGLEE-------------------------------------------------- 340 (464)
T ss_pred eeccccccccceeeccCCCceEEEeccccc--------------------------------------------------
Confidence 99999 8899999999999998874211
Q ss_pred CcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEEEc-CCceEEEEEEe
Q psy12614 384 TGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYST-ESCVRLHSLDL 433 (708)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~-d~~i~i~~~~~ 433 (708)
.+..+...|...|++++|+|=|.+||+|+ |.++++|.-..
T Consensus 341 ----------p~~~i~~AHd~~iwsl~~hPlGhil~tgsnd~t~rfw~r~r 381 (464)
T KOG0284|consen 341 ----------PLGEIPPAHDGEIWSLAYHPLGHILATGSNDRTVRFWTRNR 381 (464)
T ss_pred ----------cccCCCcccccceeeeeccccceeEeecCCCcceeeeccCC
Confidence 22233347889999999999999999966 99999997654
|
|
| >KOG0282|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-35 Score=272.51 Aligned_cols=283 Identities=14% Similarity=0.243 Sum_probs=248.7
Q ss_pred eeeeccCCCCcEEEEEEcC-CCCEEEEEeCCCcEEEEeCCC-CCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCcE
Q psy12614 18 NIKFYAPEPKVINCIACEP-KSSRLAVSRADQSIEIWDISE-TPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGFV 93 (708)
Q Consensus 18 ~~~~~~~h~~~v~~~~~s~-~~~~la~~~~dg~v~iwd~~~-~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i 93 (708)
.+..+.||+..|+++.|.| .+.+|++|+.|+.|+||++-. +.+++ ++.||. .+|.+++|+ |..+++++.|+.|
T Consensus 206 ~~~~~~gH~kgvsai~~fp~~~hLlLS~gmD~~vklW~vy~~~~~lr-tf~gH~--k~Vrd~~~s~~g~~fLS~sfD~~l 282 (503)
T KOG0282|consen 206 LSHNLSGHTKGVSAIQWFPKKGHLLLSGGMDGLVKLWNVYDDRRCLR-TFKGHR--KPVRDASFNNCGTSFLSASFDRFL 282 (503)
T ss_pred heeeccCCccccchhhhccceeeEEEecCCCceEEEEEEecCcceeh-hhhcch--hhhhhhhccccCCeeeeeecceee
Confidence 3567899999999999999 889999999999999999988 55555 999999 999999999 9999999999999
Q ss_pred EEEECCCCeEeEEEeecCCceEEEEEecCC-CEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEE
Q psy12614 94 NEYDMRRLNIKSSTAVTSGTCWCLSVHKKK-RLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVT 172 (708)
Q Consensus 94 ~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~-~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~ 172 (708)
++||+++|+++..+.. ...++|+.|+||+ +.+++|+.|+.|+.||+++++++ +.+..|-+.|..+.|-++|.++++
T Consensus 283 KlwDtETG~~~~~f~~-~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~kvv--qeYd~hLg~i~~i~F~~~g~rFis 359 (503)
T KOG0282|consen 283 KLWDTETGQVLSRFHL-DKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSGKVV--QEYDRHLGAILDITFVDEGRRFIS 359 (503)
T ss_pred eeeccccceEEEEEec-CCCceeeecCCCCCcEEEEecCCCcEEEEeccchHHH--HHHHhhhhheeeeEEccCCceEee
Confidence 9999999999988874 3578999999998 78899999999999999999987 788889999999999999999999
Q ss_pred ecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCe---eEEEeeccc--c
Q psy12614 173 GCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGV---QWSDVKTHK--K 245 (708)
Q Consensus 173 ~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~---~~~~~~~~~--~ 245 (708)
.+.| +++||+...+-.+..+.... .....++..+|++. +++-+.|+.|.++.+...- ..+.+.+|. +
T Consensus 360 sSDdks~riWe~~~~v~ik~i~~~~------~hsmP~~~~~P~~~~~~aQs~dN~i~ifs~~~~~r~nkkK~feGh~vaG 433 (503)
T KOG0282|consen 360 SSDDKSVRIWENRIPVPIKNIADPE------MHTMPCLTLHPNGKWFAAQSMDNYIAIFSTVPPFRLNKKKRFEGHSVAG 433 (503)
T ss_pred eccCccEEEEEcCCCccchhhcchh------hccCcceecCCCCCeehhhccCceEEEEecccccccCHhhhhcceeccC
Confidence 9999 99999998887776665432 55677889999997 7777889999999865432 233456664 4
Q ss_pred CeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe---CCEEEEEcCCC
Q psy12614 246 DILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH---GNRLYSGGLDS 322 (708)
Q Consensus 246 ~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~---~~~l~s~~~d~ 322 (708)
.-..+.|||||.+|++|+.||.+.+||..+ -+ ....+..|...+..+.|+ ...+++++.||
T Consensus 434 ys~~v~fSpDG~~l~SGdsdG~v~~wdwkt--------~k--------l~~~lkah~~~ci~v~wHP~e~Skvat~~w~G 497 (503)
T KOG0282|consen 434 YSCQVDFSPDGRTLCSGDSDGKVNFWDWKT--------TK--------LVSKLKAHDQPCIGVDWHPVEPSKVATCGWDG 497 (503)
T ss_pred ceeeEEEcCCCCeEEeecCCccEEEeechh--------hh--------hhhccccCCcceEEEEecCCCcceeEecccCc
Confidence 567789999999999999999999999998 44 567788999999999999 78999999999
Q ss_pred eEEEEe
Q psy12614 323 YLSLSY 328 (708)
Q Consensus 323 ~i~iw~ 328 (708)
.|++|+
T Consensus 498 ~Ikiwd 503 (503)
T KOG0282|consen 498 LIKIWD 503 (503)
T ss_pred eeEecC
Confidence 999996
|
|
| >KOG0265|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-33 Score=243.82 Aligned_cols=290 Identities=15% Similarity=0.206 Sum_probs=239.3
Q ss_pred EeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEE
Q psy12614 103 IKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVW 181 (708)
Q Consensus 103 ~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iw 181 (708)
++..+.+|.+.|..+.|+|+|.+||+|+.|..|.+|++.....- ...+.+|.+.|..+.|.+|+..|++++.| +++.|
T Consensus 39 p~m~l~gh~geI~~~~F~P~gs~~aSgG~Dr~I~LWnv~gdceN-~~~lkgHsgAVM~l~~~~d~s~i~S~gtDk~v~~w 117 (338)
T KOG0265|consen 39 PIMLLPGHKGEIYTIKFHPDGSCFASGGSDRAIVLWNVYGDCEN-FWVLKGHSGAVMELHGMRDGSHILSCGTDKTVRGW 117 (338)
T ss_pred hhhhcCCCcceEEEEEECCCCCeEeecCCcceEEEEeccccccc-eeeeccccceeEeeeeccCCCEEEEecCCceEEEE
Confidence 44556799999999999999999999999999999997643322 26788999999999999999999999999 99999
Q ss_pred EcCCCceEEEEEecccCCCCCceeEEEEEEccCC-E-EEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEE
Q psy12614 182 DIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADF-T-IITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYL 259 (708)
Q Consensus 182 d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~-l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l 259 (708)
|+++|+.+++++.+ ...++++.-+.-| . +.+++.||++++||+++...++++. .+..++++.|..++..+
T Consensus 118 D~~tG~~~rk~k~h-------~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~t~~-~kyqltAv~f~d~s~qv 189 (338)
T KOG0265|consen 118 DAETGKRIRKHKGH-------TSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEAIKTFE-NKYQLTAVGFKDTSDQV 189 (338)
T ss_pred ecccceeeehhccc-------cceeeecCccccCCeEEEecCCCceEEEEeecccchhhccc-cceeEEEEEecccccce
Confidence 99999999998844 8889988855555 3 6688899999999999888888876 46789999999999999
Q ss_pred EEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEEEcCCCeEEEEeCCCCceeec
Q psy12614 260 YCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSGGLDSYLSLSYYPPKTLVKY 337 (708)
Q Consensus 260 ~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~~~~~~~ 337 (708)
++|+-|+.|++||++. +. ....+.+|.+.|+.+..+ |..+.+-+.|.++++||++...
T Consensus 190 ~sggIdn~ikvWd~r~--------~d--------~~~~lsGh~DtIt~lsls~~gs~llsnsMd~tvrvwd~rp~~---- 249 (338)
T KOG0265|consen 190 ISGGIDNDIKVWDLRK--------ND--------GLYTLSGHADTITGLSLSRYGSFLLSNSMDNTVRVWDVRPFA---- 249 (338)
T ss_pred eeccccCceeeecccc--------Cc--------ceEEeecccCceeeEEeccCCCccccccccceEEEEEecccC----
Confidence 9999999999999987 55 678899999999999999 9999999999999999996532
Q ss_pred CccCCCCceEEEEcCCcEEEEEcCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcE
Q psy12614 338 PCTLAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKY 417 (708)
Q Consensus 338 ~~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~ 417 (708)
+..+++ .++.-.. .........++|+|++..
T Consensus 250 ----p~~R~v-----------------~if~g~~----------------------------hnfeknlL~cswsp~~~~ 280 (338)
T KOG0265|consen 250 ----PSQRCV-----------------KIFQGHI----------------------------HNFEKNLLKCSWSPNGTK 280 (338)
T ss_pred ----CCCceE-----------------EEeecch----------------------------hhhhhhcceeeccCCCCc
Confidence 111111 1111100 011233467899999999
Q ss_pred EEEEc-CCceEEEEEEecCCcceeEEeecCCcccccceeEEEEEecCCCeEEEEecCCcEEE
Q psy12614 418 VAYST-ESCVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVLISADSTLLLAVSLNGPLYI 478 (708)
Q Consensus 418 l~~~~-d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~~~~~dg~i~~ 478 (708)
+.+|. |..+++||... ....++ +|+|.. .|.+++|+|....+.+++.|.+||-
T Consensus 281 i~ags~dr~vyvwd~~~--r~~lyk----lpGh~g--svn~~~Fhp~e~iils~~sdk~i~l 334 (338)
T KOG0265|consen 281 ITAGSADRFVYVWDTTS--RRILYK----LPGHYG--SVNEVDFHPTEPIILSCSSDKTIYL 334 (338)
T ss_pred cccccccceEEEeeccc--ccEEEE----cCCcce--eEEEeeecCCCcEEEEeccCceeEe
Confidence 99865 99999999875 333333 999988 8888999999999999999998663
|
|
| >KOG0275|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-34 Score=253.97 Aligned_cols=279 Identities=17% Similarity=0.287 Sum_probs=252.5
Q ss_pred CCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEE-------EEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEE
Q psy12614 24 PEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVD-------RVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVN 94 (708)
Q Consensus 24 ~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~-------~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~ 94 (708)
+..+-+-|..|||||+||++|+.||.|.+||..+|+... ..+--+. .+|.|+.|+ ...|++|+.||.|+
T Consensus 211 g~KSh~EcA~FSPDgqyLvsgSvDGFiEVWny~~GKlrKDLkYQAqd~fMMmd--~aVlci~FSRDsEMlAsGsqDGkIK 288 (508)
T KOG0275|consen 211 GQKSHVECARFSPDGQYLVSGSVDGFIEVWNYTTGKLRKDLKYQAQDNFMMMD--DAVLCISFSRDSEMLASGSQDGKIK 288 (508)
T ss_pred ccccchhheeeCCCCceEeeccccceeeeehhccchhhhhhhhhhhcceeecc--cceEEEeecccHHHhhccCcCCcEE
Confidence 456678899999999999999999999999999987532 1333455 899999999 78999999999999
Q ss_pred EEECCCCeEeEEEe-ecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEe
Q psy12614 95 EYDMRRLNIKSSTA-VTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTG 173 (708)
Q Consensus 95 vwd~~~~~~~~~~~-~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~ 173 (708)
+|.+++|.|++.+. .|...|+|+.||.|+..+.+++.|.++++--+..|++. +.+.+|...|+...|.+||.+++++
T Consensus 289 vWri~tG~ClRrFdrAHtkGvt~l~FSrD~SqiLS~sfD~tvRiHGlKSGK~L--KEfrGHsSyvn~a~ft~dG~~iisa 366 (508)
T KOG0275|consen 289 VWRIETGQCLRRFDRAHTKGVTCLSFSRDNSQILSASFDQTVRIHGLKSGKCL--KEFRGHSSYVNEATFTDDGHHIISA 366 (508)
T ss_pred EEEEecchHHHHhhhhhccCeeEEEEccCcchhhcccccceEEEeccccchhH--HHhcCccccccceEEcCCCCeEEEe
Confidence 99999999999998 99999999999999999999999999999999999998 8999999999999999999999999
Q ss_pred cCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCC--EEEEEcCCCcEEEEeCCCCeeEEEeec---cccCe
Q psy12614 174 CAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADF--TIITGDSGGFVRFWDGKTGVQWSDVKT---HKKDI 247 (708)
Q Consensus 174 ~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~l~~~~~dg~i~~wd~~~~~~~~~~~~---~~~~i 247 (708)
+.| +|++|+..+.+++.+++.. +.+.+|..+...|.+ +++++...++|.+-++. |+.++.+.. ..+..
T Consensus 367 SsDgtvkvW~~KtteC~~Tfk~~-----~~d~~vnsv~~~PKnpeh~iVCNrsntv~imn~q-GQvVrsfsSGkREgGdF 440 (508)
T KOG0275|consen 367 SSDGTVKVWHGKTTECLSTFKPL-----GTDYPVNSVILLPKNPEHFIVCNRSNTVYIMNMQ-GQVVRSFSSGKREGGDF 440 (508)
T ss_pred cCCccEEEecCcchhhhhhccCC-----CCcccceeEEEcCCCCceEEEEcCCCeEEEEecc-ceEEeeeccCCccCCce
Confidence 999 9999999999999999876 457889999999877 59999999999999974 888888753 34677
Q ss_pred EEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEEEcCCCeEE
Q psy12614 248 LALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSGGLDSYLS 325 (708)
Q Consensus 248 ~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~~~d~~i~ 325 (708)
.+.+.+|.|.++++.+.|+.++.|...+ |+ ....+..|...+..++.+ .+.+++-+.||.++
T Consensus 441 i~~~lSpkGewiYcigED~vlYCF~~~s--------G~--------LE~tl~VhEkdvIGl~HHPHqNllAsYsEDgllK 504 (508)
T KOG0275|consen 441 INAILSPKGEWIYCIGEDGVLYCFSVLS--------GK--------LERTLPVHEKDVIGLTHHPHQNLLASYSEDGLLK 504 (508)
T ss_pred EEEEecCCCcEEEEEccCcEEEEEEeec--------Cc--------eeeeeecccccccccccCcccchhhhhcccchhh
Confidence 7888999999999999999999999999 87 778899999999999988 89999999999999
Q ss_pred EEe
Q psy12614 326 LSY 328 (708)
Q Consensus 326 iw~ 328 (708)
+|.
T Consensus 505 LWk 507 (508)
T KOG0275|consen 505 LWK 507 (508)
T ss_pred hcC
Confidence 995
|
|
| >KOG0263|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-33 Score=275.24 Aligned_cols=236 Identities=22% Similarity=0.329 Sum_probs=217.5
Q ss_pred CcEEEEEEe--CCEEEEEcCCCcEEEEECCCCe-------------------------------EeEEEeecCCceEEEE
Q psy12614 72 NSIECLTWF--NDRLFSGGLQGFVNEYDMRRLN-------------------------------IKSSTAVTSGTCWCLS 118 (708)
Q Consensus 72 ~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~~-------------------------------~~~~~~~~~~~v~~~~ 118 (708)
..++|..|+ +..||.|..|..|++|.+...+ ...++-+|.++|....
T Consensus 379 ~~v~ca~fSddssmlA~Gf~dS~i~~~Sl~p~kl~~lk~~~~l~~~d~~sad~~~~~~D~~~~~~~~~L~GH~GPVyg~s 458 (707)
T KOG0263|consen 379 QGVTCAEFSDDSSMLACGFVDSSVRVWSLTPKKLKKLKDASDLSNIDTESADVDVDMLDDDSSGTSRTLYGHSGPVYGCS 458 (707)
T ss_pred CcceeEeecCCcchhhccccccEEEEEecchhhhccccchhhhccccccccchhhhhccccCCceeEEeecCCCceeeee
Confidence 789999999 7788888899999999877321 2445779999999999
Q ss_pred EecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEeccc
Q psy12614 119 VHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKS 197 (708)
Q Consensus 119 ~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~ 197 (708)
|+|+.++|+++++|+++|+|.+.+.... ....+|..+|..+.|+|-|-|+|+++.| +-++|......+++.+.
T Consensus 459 FsPd~rfLlScSED~svRLWsl~t~s~~--V~y~GH~~PVwdV~F~P~GyYFatas~D~tArLWs~d~~~PlRifa---- 532 (707)
T KOG0263|consen 459 FSPDRRFLLSCSEDSSVRLWSLDTWSCL--VIYKGHLAPVWDVQFAPRGYYFATASHDQTARLWSTDHNKPLRIFA---- 532 (707)
T ss_pred ecccccceeeccCCcceeeeecccceeE--EEecCCCcceeeEEecCCceEEEecCCCceeeeeecccCCchhhhc----
Confidence 9999999999999999999999998887 6788999999999999999999999999 99999998877777765
Q ss_pred CCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCC
Q psy12614 198 SKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRK 276 (708)
Q Consensus 198 ~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~ 276 (708)
+|...|.|+.|+|+.. +++|+.|.+|++||..+|..++.+.||.++|.+++|||+|++|++|+.||.|.+||+.+
T Consensus 533 ---ghlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G~~VRiF~GH~~~V~al~~Sp~Gr~LaSg~ed~~I~iWDl~~- 608 (707)
T KOG0263|consen 533 ---GHLSDVDCVSFHPNSNYVATGSSDRTVRLWDVSTGNSVRIFTGHKGPVTALAFSPCGRYLASGDEDGLIKIWDLAN- 608 (707)
T ss_pred ---ccccccceEEECCcccccccCCCCceEEEEEcCCCcEEEEecCCCCceEEEEEcCCCceEeecccCCcEEEEEcCC-
Confidence 4488999999999996 88999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEEEcCCCeEEEEeCCCC
Q psy12614 277 PQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSGGLDSYLSLSYYPPK 332 (708)
Q Consensus 277 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~~ 332 (708)
|. ....+.+|++.|.++.|+ |..|++|+.|.+|++||+...
T Consensus 609 -------~~--------~v~~l~~Ht~ti~SlsFS~dg~vLasgg~DnsV~lWD~~~~ 651 (707)
T KOG0263|consen 609 -------GS--------LVKQLKGHTGTIYSLSFSRDGNVLASGGADNSVRLWDLTKV 651 (707)
T ss_pred -------Cc--------chhhhhcccCceeEEEEecCCCEEEecCCCCeEEEEEchhh
Confidence 87 788899999999999999 999999999999999998653
|
|
| >KOG0281|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-35 Score=257.56 Aligned_cols=280 Identities=16% Similarity=0.255 Sum_probs=235.1
Q ss_pred CCcEEEEEEeCCEEEEEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEe
Q psy12614 71 SNSIECLTWFNDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKL 150 (708)
Q Consensus 71 ~~~v~~l~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~ 150 (708)
..+|.|+.|....+++|..|++|+|||..+..+++.+.+|.+.|.|+.|. .+.+++|+.|.+|++||+++++.+ .+
T Consensus 197 skgVYClQYDD~kiVSGlrDnTikiWD~n~~~c~~~L~GHtGSVLCLqyd--~rviisGSSDsTvrvWDv~tge~l--~t 272 (499)
T KOG0281|consen 197 SKGVYCLQYDDEKIVSGLRDNTIKIWDKNSLECLKILTGHTGSVLCLQYD--ERVIVSGSSDSTVRVWDVNTGEPL--NT 272 (499)
T ss_pred CCceEEEEecchhhhcccccCceEEeccccHHHHHhhhcCCCcEEeeecc--ceEEEecCCCceEEEEeccCCchh--hH
Confidence 36899999999999999999999999999999999999999999999995 458999999999999999999998 88
Q ss_pred cccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEEEEcCCCcEEEE
Q psy12614 151 LDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFW 229 (708)
Q Consensus 151 ~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~w 229 (708)
+.+|...|..+.|+ +.++++++.| ++.+||+.....+.....-. +|...|+.+.|+.. .+++++.|.+|++|
T Consensus 273 lihHceaVLhlrf~--ng~mvtcSkDrsiaVWdm~sps~it~rrVLv----GHrAaVNvVdfd~k-yIVsASgDRTikvW 345 (499)
T KOG0281|consen 273 LIHHCEAVLHLRFS--NGYMVTCSKDRSIAVWDMASPTDITLRRVLV----GHRAAVNVVDFDDK-YIVSASGDRTIKVW 345 (499)
T ss_pred HhhhcceeEEEEEe--CCEEEEecCCceeEEEeccCchHHHHHHHHh----hhhhheeeeccccc-eEEEecCCceEEEE
Confidence 99999999999997 5589999999 99999998655332211111 45888999998744 68999999999999
Q ss_pred eCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEE
Q psy12614 230 DGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLA 309 (708)
Q Consensus 230 d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~ 309 (708)
+..+++.++++.+|...|.|+.+ .++++++|+.|.+|++||+.. |. .+..+.+|+.-|+++.
T Consensus 346 ~~st~efvRtl~gHkRGIAClQY--r~rlvVSGSSDntIRlwdi~~--------G~--------cLRvLeGHEeLvRciR 407 (499)
T KOG0281|consen 346 STSTCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIEC--------GA--------CLRVLEGHEELVRCIR 407 (499)
T ss_pred eccceeeehhhhcccccceehhc--cCeEEEecCCCceEEEEeccc--------cH--------HHHHHhchHHhhhhee
Confidence 99999999999999999999987 578999999999999999999 87 7788999999999999
Q ss_pred EeCCEEEEEcCCCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEEEcCCeEEEEEecCCCCCCCCCCCCCCcccCC
Q psy12614 310 LHGNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPLL 389 (708)
Q Consensus 310 ~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~ 389 (708)
|..+.+++|+-||+|++||+....-...+
T Consensus 408 Fd~krIVSGaYDGkikvWdl~aaldpra~--------------------------------------------------- 436 (499)
T KOG0281|consen 408 FDNKRIVSGAYDGKIKVWDLQAALDPRAP--------------------------------------------------- 436 (499)
T ss_pred ecCceeeeccccceEEEEecccccCCccc---------------------------------------------------
Confidence 99999999999999999999654311111
Q ss_pred CCceEEEEEEecCCCceEEEEeCCCCcEEEE-EcCCceEEEEEEe
Q psy12614 390 SFPRLIVKMSAVNNATIRCSVVSNDGKYVAY-STESCVRLHSLDL 433 (708)
Q Consensus 390 ~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~-~~d~~i~i~~~~~ 433 (708)
.....+.....|.+.|..+.|. ...+++ +.|.+|.|||+..
T Consensus 437 -~~~~Cl~~lv~hsgRVFrLQFD--~fqIvsssHddtILiWdFl~ 478 (499)
T KOG0281|consen 437 -ASTLCLRTLVEHSGRVFRLQFD--EFQIISSSHDDTILIWDFLN 478 (499)
T ss_pred -ccchHHHhhhhccceeEEEeec--ceEEEeccCCCeEEEEEcCC
Confidence 0001222233567788888884 334555 5599999999976
|
|
| >KOG0278|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-34 Score=239.76 Aligned_cols=282 Identities=17% Similarity=0.230 Sum_probs=256.2
Q ss_pred ccCCCCcEEEEEEcC---CCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEE
Q psy12614 22 YAPEPKVINCIACEP---KSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEY 96 (708)
Q Consensus 22 ~~~h~~~v~~~~~s~---~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vw 96 (708)
-.||+.+|..++||| +|-+|++++.||.-.+-+-++|..+. +|.||+ +.|.+.+.+ .-+-++++.|-+-++|
T Consensus 10 c~ghtrpvvdl~~s~itp~g~flisa~kd~~pmlr~g~tgdwig-tfeghk--gavw~~~l~~na~~aasaaadftakvw 86 (334)
T KOG0278|consen 10 CHGHTRPVVDLAFSPITPDGYFLISASKDGKPMLRNGDTGDWIG-TFEGHK--GAVWSATLNKNATRAASAAADFTAKVW 86 (334)
T ss_pred EcCCCcceeEEeccCCCCCceEEEEeccCCCchhccCCCCCcEE-eeeccC--cceeeeecCchhhhhhhhcccchhhhh
Confidence 469999999999985 88899999999999999999999998 999999 999999988 5567788999999999
Q ss_pred ECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC
Q psy12614 97 DMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA 176 (708)
Q Consensus 97 d~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d 176 (708)
|.-+|..++.+. |..-|.+++|+.|.++|++|+.+..+++||++..+... ..+.+|.+.|..+.|....+.+++++.|
T Consensus 87 ~a~tgdelhsf~-hkhivk~~af~~ds~~lltgg~ekllrvfdln~p~App-~E~~ghtg~Ir~v~wc~eD~~iLSSadd 164 (334)
T KOG0278|consen 87 DAVTGDELHSFE-HKHIVKAVAFSQDSNYLLTGGQEKLLRVFDLNRPKAPP-KEISGHTGGIRTVLWCHEDKCILSSADD 164 (334)
T ss_pred hhhhhhhhhhhh-hhheeeeEEecccchhhhccchHHHhhhhhccCCCCCc-hhhcCCCCcceeEEEeccCceEEeeccC
Confidence 999999988875 77789999999999999999999999999999876653 6788999999999999999999999888
Q ss_pred -eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCC
Q psy12614 177 -AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSED 255 (708)
Q Consensus 177 -~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~ 255 (708)
+|++||.+++..++++.. ..+|+++.+++||++++....+.|.+||..+...++.++ ..-.|.+...+|+
T Consensus 165 ~tVRLWD~rTgt~v~sL~~--------~s~VtSlEvs~dG~ilTia~gssV~Fwdaksf~~lKs~k-~P~nV~SASL~P~ 235 (334)
T KOG0278|consen 165 KTVRLWDHRTGTEVQSLEF--------NSPVTSLEVSQDGRILTIAYGSSVKFWDAKSFGLLKSYK-MPCNVESASLHPK 235 (334)
T ss_pred CceEEEEeccCcEEEEEec--------CCCCcceeeccCCCEEEEecCceeEEeccccccceeecc-CccccccccccCC
Confidence 999999999999999976 577999999999999999999999999999998888877 4678999999999
Q ss_pred CCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEE-EeccccceEEEEEe--CCEEEEEcCCCeEEEEeCCCC
Q psy12614 256 ENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVN-RVIHEGDVKSLALH--GNRLYSGGLDSYLSLSYYPPK 332 (708)
Q Consensus 256 ~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~~ 332 (708)
...+++|+.|..++.||..+ |+ .+.. ..+|.++|.++.|+ |...++|+.||+|++|.....
T Consensus 236 k~~fVaGged~~~~kfDy~T--------ge--------Ei~~~nkgh~gpVhcVrFSPdGE~yAsGSEDGTirlWQt~~~ 299 (334)
T KOG0278|consen 236 KEFFVAGGEDFKVYKFDYNT--------GE--------EIGSYNKGHFGPVHCVRFSPDGELYASGSEDGTIRLWQTTPG 299 (334)
T ss_pred CceEEecCcceEEEEEeccC--------Cc--------eeeecccCCCCceEEEEECCCCceeeccCCCceEEEEEecCC
Confidence 99999999999999999999 86 4444 38999999999999 899999999999999988655
Q ss_pred c
Q psy12614 333 T 333 (708)
Q Consensus 333 ~ 333 (708)
.
T Consensus 300 ~ 300 (334)
T KOG0278|consen 300 K 300 (334)
T ss_pred C
Confidence 4
|
|
| >KOG0313|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-32 Score=246.53 Aligned_cols=276 Identities=16% Similarity=0.263 Sum_probs=238.0
Q ss_pred CCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--C---CEEEEEcCCCcEEEEEC
Q psy12614 24 PEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--N---DRLFSGGLQGFVNEYDM 98 (708)
Q Consensus 24 ~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~---~~l~s~~~d~~i~vwd~ 98 (708)
.|++.|.++... ++++.+|++||.++|||... +... ++.||. ++|.+++|. . ..+++++.|.++++|.+
T Consensus 103 ~hdDWVSsv~~~--~~~IltgsYDg~~riWd~~G-k~~~-~~~Ght--~~ik~v~~v~~n~~~~~fvsas~Dqtl~Lw~~ 176 (423)
T KOG0313|consen 103 LHDDWVSSVKGA--SKWILTGSYDGTSRIWDLKG-KSIK-TIVGHT--GPIKSVAWVIKNSSSCLFVSASMDQTLRLWKW 176 (423)
T ss_pred cchhhhhhhccc--CceEEEeecCCeeEEEecCC-ceEE-EEecCC--cceeeeEEEecCCccceEEEecCCceEEEEEe
Confidence 388899998888 78999999999999999874 5554 899999 999999998 3 45999999999999999
Q ss_pred CCCeE----eEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCC-----------------------cEEEEEec
Q psy12614 99 RRLNI----KSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDE-----------------------GLLYEKLL 151 (708)
Q Consensus 99 ~~~~~----~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~-----------------------~~~~~~~~ 151 (708)
+.+.. +....+|...|.+++..++|..+++|+.|..|.||+..+. .......+
T Consensus 177 ~~~~~~~~~~~~~~GHk~~V~sVsv~~sgtr~~SgS~D~~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~~r~P~vtl 256 (423)
T KOG0313|consen 177 NVGENKVKALKVCRGHKRSVDSVSVDSSGTRFCSGSWDTMLKIWSVETDEEDELESSSNRRRKKQKREKEGGTRTPLVTL 256 (423)
T ss_pred cCchhhhhHHhHhcccccceeEEEecCCCCeEEeecccceeeecccCCCccccccccchhhhhhhhhhhcccccCceEEe
Confidence 88753 3334599999999999999999999999999999993221 11223568
Q ss_pred ccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEE
Q psy12614 152 DRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFW 229 (708)
Q Consensus 152 ~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~w 229 (708)
.+|.++|.++.|++ ...+++++.| +|+.||++++..+.++.. ...+.++.++|... +++|+.|..+++|
T Consensus 257 ~GHt~~Vs~V~w~d-~~v~yS~SwDHTIk~WDletg~~~~~~~~--------~ksl~~i~~~~~~~Ll~~gssdr~irl~ 327 (423)
T KOG0313|consen 257 EGHTEPVSSVVWSD-ATVIYSVSWDHTIKVWDLETGGLKSTLTT--------NKSLNCISYSPLSKLLASGSSDRHIRLW 327 (423)
T ss_pred cccccceeeEEEcC-CCceEeecccceEEEEEeecccceeeeec--------CcceeEeecccccceeeecCCCCceeec
Confidence 89999999999987 7789999999 999999999999988865 57799999999875 8899999999999
Q ss_pred eCCCCe---eEEEeeccccCeEEEEEeCCC-CEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccce
Q psy12614 230 DGKTGV---QWSDVKTHKKDILALTVSEDE-NYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDV 305 (708)
Q Consensus 230 d~~~~~---~~~~~~~~~~~i~~~~~s~~~-~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v 305 (708)
|.+++. ...++.+|...|.++.|+|.. ..|++++.|+++++||+++ . +.++..+.+|...|
T Consensus 328 DPR~~~gs~v~~s~~gH~nwVssvkwsp~~~~~~~S~S~D~t~klWDvRS--------~-------k~plydI~~h~DKv 392 (423)
T KOG0313|consen 328 DPRTGDGSVVSQSLIGHKNWVSSVKWSPTNEFQLVSGSYDNTVKLWDVRS--------T-------KAPLYDIAGHNDKV 392 (423)
T ss_pred CCCCCCCceeEEeeecchhhhhheecCCCCceEEEEEecCCeEEEEEecc--------C-------CCcceeeccCCceE
Confidence 998763 456788999999999999976 5678899999999999998 2 22577889999999
Q ss_pred EEEEEe-CCEEEEEcCCCeEEEEeC
Q psy12614 306 KSLALH-GNRLYSGGLDSYLSLSYY 329 (708)
Q Consensus 306 ~~l~~~-~~~l~s~~~d~~i~iw~~ 329 (708)
.++.|. +..+++||.|.+++++.-
T Consensus 393 l~vdW~~~~~IvSGGaD~~l~i~~~ 417 (423)
T KOG0313|consen 393 LSVDWNEGGLIVSGGADNKLRIFKG 417 (423)
T ss_pred EEEeccCCceEEeccCcceEEEecc
Confidence 999999 889999999999999764
|
|
| >KOG0316|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-32 Score=229.79 Aligned_cols=278 Identities=13% Similarity=0.187 Sum_probs=239.0
Q ss_pred EEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEc
Q psy12614 63 RVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQI 140 (708)
Q Consensus 63 ~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~ 140 (708)
..+.+++ ++|.++.|+ |++.++++.|.+|++||...|.+++++.+|+..|..++.+.|+..+++|+.|..+.+||+
T Consensus 11 ~~l~~~q--gaV~avryN~dGnY~ltcGsdrtvrLWNp~rg~liktYsghG~EVlD~~~s~Dnskf~s~GgDk~v~vwDV 88 (307)
T KOG0316|consen 11 SILDCAQ--GAVRAVRYNVDGNYCLTCGSDRTVRLWNPLRGALIKTYSGHGHEVLDAALSSDNSKFASCGGDKAVQVWDV 88 (307)
T ss_pred eeecccc--cceEEEEEccCCCEEEEcCCCceEEeecccccceeeeecCCCceeeeccccccccccccCCCCceEEEEEc
Confidence 3788888 999999999 999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCC--ceEEEEEecccCCCCCceeEEEEEEccCCEE
Q psy12614 141 SDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKG--HAIHKMSLDKSSKFSKNTAVWCVAFCADFTI 217 (708)
Q Consensus 141 ~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~--~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l 217 (708)
++|+.. +.+.+|.+.|+.+.|+.+...+++|+.| .+++||.++. ++++.+... ...|.++... +-.+
T Consensus 89 ~TGkv~--Rr~rgH~aqVNtV~fNeesSVv~SgsfD~s~r~wDCRS~s~ePiQildea-------~D~V~Si~v~-~heI 158 (307)
T KOG0316|consen 89 NTGKVD--RRFRGHLAQVNTVRFNEESSVVASGSFDSSVRLWDCRSRSFEPIQILDEA-------KDGVSSIDVA-EHEI 158 (307)
T ss_pred ccCeee--eecccccceeeEEEecCcceEEEeccccceeEEEEcccCCCCccchhhhh-------cCceeEEEec-ccEE
Confidence 999998 8999999999999999999999999999 9999998754 455555543 6678888765 2359
Q ss_pred EEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEE
Q psy12614 218 ITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVN 297 (708)
Q Consensus 218 ~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~ 297 (708)
++|+.||+++.||++.|+......+ .+|++++|++|++..+.++.|+++++.|-.+ |+ .+..
T Consensus 159 vaGS~DGtvRtydiR~G~l~sDy~g--~pit~vs~s~d~nc~La~~l~stlrLlDk~t--------Gk--------lL~s 220 (307)
T KOG0316|consen 159 VAGSVDGTVRTYDIRKGTLSSDYFG--HPITSVSFSKDGNCSLASSLDSTLRLLDKET--------GK--------LLKS 220 (307)
T ss_pred EeeccCCcEEEEEeecceeehhhcC--CcceeEEecCCCCEEEEeeccceeeecccch--------hH--------HHHH
Confidence 9999999999999999988766654 6899999999999999999999999999999 87 6778
Q ss_pred EeccccceEEEEEe----CCEEEEEcCCCeEEEEeCCCCc-eeecCccCC-CCceEEEEcCCcEEEEEcCCeEEEEEec
Q psy12614 298 RVIHEGDVKSLALH----GNRLYSGGLDSYLSLSYYPPKT-LVKYPCTLA-QSTPVSLAKDIQHVLLQYTSHLELWSLG 370 (708)
Q Consensus 298 ~~~~~~~v~~l~~~----~~~l~s~~~d~~i~iw~~~~~~-~~~~~~~~~-~~~~~~~s~~~~~l~~~~~~~i~i~~~~ 370 (708)
+.+|...-..+... ...+++|+.||.+.+||+.... +.++..+.. ....+++.|....++++.++.+..|.-.
T Consensus 221 YkGhkn~eykldc~l~qsdthV~sgSEDG~Vy~wdLvd~~~~sk~~~~~~v~v~dl~~hp~~~~f~~A~~~~~~~~~~~ 299 (307)
T KOG0316|consen 221 YKGHKNMEYKLDCCLNQSDTHVFSGSEDGKVYFWDLVDETQISKLSVVSTVIVTDLSCHPTMDDFITATGHGDLFWYQE 299 (307)
T ss_pred hcccccceeeeeeeecccceeEEeccCCceEEEEEeccceeeeeeccCCceeEEeeecccCccceeEecCCceeceeeh
Confidence 88887765544433 7789999999999999998876 334432222 2467888888888888877777777644
|
|
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-31 Score=294.49 Aligned_cols=292 Identities=15% Similarity=0.253 Sum_probs=233.7
Q ss_pred ccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCC----Ce---EEEEEecCCCCCcEEEEEEe---CCEEEEEcCCC
Q psy12614 22 YAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISET----PH---VDRVFIGDPLSNSIECLTWF---NDRLFSGGLQG 91 (708)
Q Consensus 22 ~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~----~~---~~~~~~~h~~~~~v~~l~~~---~~~l~s~~~d~ 91 (708)
+..|.+.|++++|+|+|++||+|+.|+.|+|||.... .. ....+. +. ..|.+++|+ +.+|++++.||
T Consensus 479 ~~~~~~~V~~i~fs~dg~~latgg~D~~I~iwd~~~~~~~~~~~~~~~~~~~-~~--~~v~~l~~~~~~~~~las~~~Dg 555 (793)
T PLN00181 479 LLNSSNLVCAIGFDRDGEFFATAGVNKKIKIFECESIIKDGRDIHYPVVELA-SR--SKLSGICWNSYIKSQVASSNFEG 555 (793)
T ss_pred ccCCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCcccccccccccceEEec-cc--CceeeEEeccCCCCEEEEEeCCC
Confidence 3458999999999999999999999999999998641 11 111233 33 679999998 68999999999
Q ss_pred cEEEEECCCCeEeEEEeecCCceEEEEEec-CCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEEC-CCCCE
Q psy12614 92 FVNEYDMRRLNIKSSTAVTSGTCWCLSVHK-KKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWH-SSGDY 169 (708)
Q Consensus 92 ~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~-~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s-~d~~~ 169 (708)
+|++||+.+++.+..+.+|.+.|++++|+| ++.+|++|+.|+.|++||+.++... ..+.. ...+.++.|+ +++.+
T Consensus 556 ~v~lWd~~~~~~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~~--~~~~~-~~~v~~v~~~~~~g~~ 632 (793)
T PLN00181 556 VVQVWDVARSQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSI--GTIKT-KANICCVQFPSESGRS 632 (793)
T ss_pred eEEEEECCCCeEEEEecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCcEE--EEEec-CCCeEEEEEeCCCCCE
Confidence 999999999999999999999999999997 7889999999999999999988776 44443 3578999994 57999
Q ss_pred EEEecCC-eEEEEEcCCCce-EEEEEecccCCCCCceeEEEEEEccCCEEEEEcCCCcEEEEeCCC------CeeEEEee
Q psy12614 170 LVTGCAA-AVRVWDIHKGHA-IHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKT------GVQWSDVK 241 (708)
Q Consensus 170 l~~~~~d-~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~wd~~~------~~~~~~~~ 241 (708)
|++|+.| .|++||+++++. +..+. +|...|.++.|.+...+++++.|+.|++||+.. ...+..+.
T Consensus 633 latgs~dg~I~iwD~~~~~~~~~~~~-------~h~~~V~~v~f~~~~~lvs~s~D~~ikiWd~~~~~~~~~~~~l~~~~ 705 (793)
T PLN00181 633 LAFGSADHKVYYYDLRNPKLPLCTMI-------GHSKTVSYVRFVDSSTLVSSSTDNTLKLWDLSMSISGINETPLHSFM 705 (793)
T ss_pred EEEEeCCCeEEEEECCCCCccceEec-------CCCCCEEEEEEeCCCEEEEEECCCEEEEEeCCCCccccCCcceEEEc
Confidence 9999999 999999987653 33333 347889999998555799999999999999974 35678889
Q ss_pred ccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEEEc
Q psy12614 242 THKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSGG 319 (708)
Q Consensus 242 ~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~~ 319 (708)
+|...+.+++|+|++++|++|+.|+.+++|+............. ............|...|.+++|+ +..|++++
T Consensus 706 gh~~~i~~v~~s~~~~~lasgs~D~~v~iw~~~~~~~~~s~~~~---~~~~~~~~~~~~~~~~V~~v~ws~~~~~lva~~ 782 (793)
T PLN00181 706 GHTNVKNFVGLSVSDGYIATGSETNEVFVYHKAFPMPVLSYKFK---TIDPVSGLEVDDASQFISSVCWRGQSSTLVAAN 782 (793)
T ss_pred CCCCCeeEEEEcCCCCEEEEEeCCCEEEEEECCCCCceEEEecc---cCCcccccccCCCCcEEEEEEEcCCCCeEEEec
Confidence 99999999999999999999999999999998651000000000 00000011123455679999998 88999999
Q ss_pred CCCeEEEEeC
Q psy12614 320 LDSYLSLSYY 329 (708)
Q Consensus 320 ~d~~i~iw~~ 329 (708)
.||.|++|++
T Consensus 783 ~dG~I~i~~~ 792 (793)
T PLN00181 783 STGNIKILEM 792 (793)
T ss_pred CCCcEEEEec
Confidence 9999999986
|
|
| >KOG0282|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-33 Score=260.29 Aligned_cols=290 Identities=16% Similarity=0.270 Sum_probs=242.1
Q ss_pred eEeEEEeecCCceEEEEEec-CCCEEEEEeCCCcEEEEEccC-CcEEEEEecccccccEEEEEECCCCCEEEEecCC-eE
Q psy12614 102 NIKSSTAVTSGTCWCLSVHK-KKRLLAAGTEQGHINLFQISD-EGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AV 178 (708)
Q Consensus 102 ~~~~~~~~~~~~v~~~~~s~-~~~~la~~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i 178 (708)
+.+..+.+|...|.++.|.| .+.+|++++.|+.|+||++-. +.++ +++.+|..+|.+++|+++|..+++++.| .|
T Consensus 205 k~~~~~~gH~kgvsai~~fp~~~hLlLS~gmD~~vklW~vy~~~~~l--rtf~gH~k~Vrd~~~s~~g~~fLS~sfD~~l 282 (503)
T KOG0282|consen 205 KLSHNLSGHTKGVSAIQWFPKKGHLLLSGGMDGLVKLWNVYDDRRCL--RTFKGHRKPVRDASFNNCGTSFLSASFDRFL 282 (503)
T ss_pred hheeeccCCccccchhhhccceeeEEEecCCCceEEEEEEecCccee--hhhhcchhhhhhhhccccCCeeeeeecceee
Confidence 45677889999999999999 888999999999999999876 6666 8999999999999999999999999999 99
Q ss_pred EEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCC-E-EEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCC
Q psy12614 179 RVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADF-T-IITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDE 256 (708)
Q Consensus 179 ~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~-l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~ 256 (708)
++||.++|+++.++.. ...++|+.|.||+ + +++|+.|+.|+.||+++++.++.+..|-+.|..+.|-++|
T Consensus 283 KlwDtETG~~~~~f~~--------~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~kvvqeYd~hLg~i~~i~F~~~g 354 (503)
T KOG0282|consen 283 KLWDTETGQVLSRFHL--------DKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSGKVVQEYDRHLGAILDITFVDEG 354 (503)
T ss_pred eeeccccceEEEEEec--------CCCceeeecCCCCCcEEEEecCCCcEEEEeccchHHHHHHHhhhhheeeeEEccCC
Confidence 9999999999999976 5678999999998 3 9999999999999999999999999999999999999999
Q ss_pred CEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEeCCEEEEEcCCCeEEEEeCCCCceee
Q psy12614 257 NYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALHGNRLYSGGLDSYLSLSYYPPKTLVK 336 (708)
Q Consensus 257 ~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~s~~~d~~i~iw~~~~~~~~~ 336 (708)
+++++++.|+++++|+... +- .+...
T Consensus 355 ~rFissSDdks~riWe~~~--------~v--------~ik~i-------------------------------------- 380 (503)
T KOG0282|consen 355 RRFISSSDDKSVRIWENRI--------PV--------PIKNI-------------------------------------- 380 (503)
T ss_pred ceEeeeccCccEEEEEcCC--------Cc--------cchhh--------------------------------------
Confidence 9999999999999999887 31 00000
Q ss_pred cCccCCCCceEEEEcCCcEEEEEcCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCc
Q psy12614 337 YPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGK 416 (708)
Q Consensus 337 ~~~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~ 416 (708)
.........+++.+|+++
T Consensus 381 --------------------------------------------------------------~~~~~hsmP~~~~~P~~~ 398 (503)
T KOG0282|consen 381 --------------------------------------------------------------ADPEMHTMPCLTLHPNGK 398 (503)
T ss_pred --------------------------------------------------------------cchhhccCcceecCCCCC
Confidence 001122346788999999
Q ss_pred EEEE-EcCCceEEEEEEecCCcceeEEeecCCcccccceeEEEEEecCCCeEEEEecCCc--EEEecCCCeEEEEEecCC
Q psy12614 417 YVAY-STESCVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVLISADSTLLLAVSLNGP--LYIIDLSSLEIKYCVDPY 493 (708)
Q Consensus 417 ~l~~-~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~~~~~dg~--i~~~~~~~~~~~~~~~~~ 493 (708)
++++ +-|+.|.+|.+.. ...+.+-+.+.+|.....-..+.|||||.+|++|+.+|. +|++.+. +++..++
T Consensus 399 ~~~aQs~dN~i~ifs~~~---~~r~nkkK~feGh~vaGys~~v~fSpDG~~l~SGdsdG~v~~wdwkt~--kl~~~lk-- 471 (503)
T KOG0282|consen 399 WFAAQSMDNYIAIFSTVP---PFRLNKKKRFEGHSVAGYSCQVDFSPDGRTLCSGDSDGKVNFWDWKTT--KLVSKLK-- 471 (503)
T ss_pred eehhhccCceEEEEeccc---ccccCHhhhhcceeccCceeeEEEcCCCCeEEeecCCccEEEeechhh--hhhhccc--
Confidence 9998 6699999999763 334444445777776333445999999999999999999 6666554 5555554
Q ss_pred CCCccCcceEEEEECCC-CcEEEEEecCCeEEEEE
Q psy12614 494 KSNLMSDVISLVQMSEC-KQYIVCADRKSHVVIWK 527 (708)
Q Consensus 494 ~~~~~~~~i~~~~~s~~-~~~l~~~~~d~~i~iw~ 527 (708)
.| ...+..+.|+|. ...+|+++.||.|++|+
T Consensus 472 -ah--~~~ci~v~wHP~e~Skvat~~w~G~Ikiwd 503 (503)
T KOG0282|consen 472 -AH--DQPCIGVDWHPVEPSKVATCGWDGLIKIWD 503 (503)
T ss_pred -cC--CcceEEEEecCCCcceeEecccCceeEecC
Confidence 45 678999999995 45789999999999996
|
|
| >KOG0266|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-31 Score=267.87 Aligned_cols=281 Identities=18% Similarity=0.334 Sum_probs=242.1
Q ss_pred EEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECCCCe--EeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEE
Q psy12614 64 VFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMRRLN--IKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQ 139 (708)
Q Consensus 64 ~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~~--~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd 139 (708)
.+.+|. ...|.++.|+ |+.+++++.++.+++|+..+++ ..+.+.+|...|.+++|+||++++++++.|++|++||
T Consensus 153 ~~~~~~-~~sv~~~~fs~~g~~l~~~~~~~~i~~~~~~~~~~~~~~~l~~h~~~v~~~~fs~d~~~l~s~s~D~tiriwd 231 (456)
T KOG0266|consen 153 TLAGHE-CPSVTCVDFSPDGRALAAASSDGLIRIWKLEGIKSNLLRELSGHTRGVSDVAFSPDGSYLLSGSDDKTLRIWD 231 (456)
T ss_pred eecccc-cCceEEEEEcCCCCeEEEccCCCcEEEeecccccchhhccccccccceeeeEECCCCcEEEEecCCceEEEee
Confidence 555553 3889999999 9999999999999999998888 7778889999999999999999999999999999999
Q ss_pred c-cCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-
Q psy12614 140 I-SDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT- 216 (708)
Q Consensus 140 ~-~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~- 216 (708)
+ ..+... +.+.+|...|++++|+|+++++++|+.| +|++||+++++++..+..+ ...|.+++|+++++
T Consensus 232 ~~~~~~~~--~~l~gH~~~v~~~~f~p~g~~i~Sgs~D~tvriWd~~~~~~~~~l~~h-------s~~is~~~f~~d~~~ 302 (456)
T KOG0266|consen 232 LKDDGRNL--KTLKGHSTYVTSVAFSPDGNLLVSGSDDGTVRIWDVRTGECVRKLKGH-------SDGISGLAFSPDGNL 302 (456)
T ss_pred ccCCCeEE--EEecCCCCceEEEEecCCCCEEEEecCCCcEEEEeccCCeEEEeeecc-------CCceEEEEECCCCCE
Confidence 9 444555 8899999999999999999999999999 9999999999999999844 88999999999996
Q ss_pred EEEEcCCCcEEEEeCCCCe--eEEEeeccccC--eEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcce
Q psy12614 217 IITGDSGGFVRFWDGKTGV--QWSDVKTHKKD--ILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVW 292 (708)
Q Consensus 217 l~~~~~dg~i~~wd~~~~~--~~~~~~~~~~~--i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~ 292 (708)
+++++.||.|++||+.++. +...+..+... ++++.|+|++.+++++..|+.+++||+.. +.
T Consensus 303 l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~fsp~~~~ll~~~~d~~~~~w~l~~--------~~------- 367 (456)
T KOG0266|consen 303 LVSASYDGTIRVWDLETGSKLCLKLLSGAENSAPVTSVQFSPNGKYLLSASLDRTLKLWDLRS--------GK------- 367 (456)
T ss_pred EEEcCCCccEEEEECCCCceeeeecccCCCCCCceeEEEECCCCcEEEEecCCCeEEEEEccC--------Cc-------
Confidence 8888999999999999998 56777666555 99999999999999999999999999998 65
Q ss_pred EEeEEEeccccceEEE---EEe--CCEEEEEcCCCeEEEEeCCCCc-eeecCcc-CCCCceEEEEcCCcEEEEE---cCC
Q psy12614 293 VRSVNRVIHEGDVKSL---ALH--GNRLYSGGLDSYLSLSYYPPKT-LVKYPCT-LAQSTPVSLAKDIQHVLLQ---YTS 362 (708)
Q Consensus 293 ~~~~~~~~~~~~v~~l---~~~--~~~l~s~~~d~~i~iw~~~~~~-~~~~~~~-~~~~~~~~~s~~~~~l~~~---~~~ 362 (708)
......+|...+.++ ... +.++++|+.|+.|.+|++.+.. +..+.++ ......+.+++...++++. .|+
T Consensus 368 -~~~~~~~~~~~~~~~~~~~~~~~~~~i~sg~~d~~v~~~~~~s~~~~~~l~~h~~~~~~~~~~~~~~~~~~s~s~~~d~ 446 (456)
T KOG0266|consen 368 -SVGTYTGHSNLVRCIFSPTLSTGGKLIYSGSEDGSVYVWDSSSGGILQRLEGHSKAAVSDLSSHPTENLIASSSFEGDG 446 (456)
T ss_pred -ceeeecccCCcceeEecccccCCCCeEEEEeCCceEEEEeCCccchhhhhcCCCCCceeccccCCCcCeeeecCcCCCc
Confidence 566777777754333 222 8999999999999999999755 4555544 4555678889999999985 588
Q ss_pred eEEEEEec
Q psy12614 363 HLELWSLG 370 (708)
Q Consensus 363 ~i~i~~~~ 370 (708)
.+.+|...
T Consensus 447 ~~~~w~~~ 454 (456)
T KOG0266|consen 447 LIRLWKYD 454 (456)
T ss_pred eEEEecCC
Confidence 89999764
|
|
| >cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-30 Score=252.53 Aligned_cols=279 Identities=20% Similarity=0.329 Sum_probs=236.9
Q ss_pred EEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEcc
Q psy12614 64 VFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQIS 141 (708)
Q Consensus 64 ~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~ 141 (708)
.+.+|. .+|.+++|+ +++|++++.||.|++|++.+++....+..|...+..+.|+|+++++++++.++.|++||+.
T Consensus 4 ~~~~h~--~~i~~~~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~~~~ 81 (289)
T cd00200 4 TLKGHT--GGVTCVAFSPDGKLLATGSGDGTIKVWDLETGELLRTLKGHTGPVRDVAASADGTYLASGSSDKTIRLWDLE 81 (289)
T ss_pred HhcccC--CCEEEEEEcCCCCEEEEeecCcEEEEEEeeCCCcEEEEecCCcceeEEEECCCCCEEEEEcCCCeEEEEEcC
Confidence 577898 999999999 7999999999999999999998888899999999999999999999999999999999999
Q ss_pred CCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEE
Q psy12614 142 DEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IIT 219 (708)
Q Consensus 142 ~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~ 219 (708)
+++.. ..+..|...+.++.|+|+++++++++.+ .+.+||+.+++....+.. +...+.+++|+|++. +++
T Consensus 82 ~~~~~--~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-------~~~~i~~~~~~~~~~~l~~ 152 (289)
T cd00200 82 TGECV--RTLTGHTSYVSSVAFSPDGRILSSSSRDKTIKVWDVETGKCLTTLRG-------HTDWVNSVAFSPDGTFVAS 152 (289)
T ss_pred cccce--EEEeccCCcEEEEEEcCCCCEEEEecCCCeEEEEECCCcEEEEEecc-------CCCcEEEEEEcCcCCEEEE
Confidence 87665 5677888899999999999999988877 999999998888777762 277899999999886 555
Q ss_pred EcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEe
Q psy12614 220 GDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRV 299 (708)
Q Consensus 220 ~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 299 (708)
++.+|.|++||+++++.+..+..|...+.++.|+|+++.+++++.++.+++||+.. ++ ....+.
T Consensus 153 ~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~--------~~--------~~~~~~ 216 (289)
T cd00200 153 SSQDGTIKLWDLRTGKCVATLTGHTGEVNSVAFSPDGEKLLSSSSDGTIKLWDLST--------GK--------CLGTLR 216 (289)
T ss_pred EcCCCcEEEEEccccccceeEecCccccceEEECCCcCEEEEecCCCcEEEEECCC--------Cc--------eecchh
Confidence 55599999999999998888988999999999999999999999999999999987 54 455555
Q ss_pred ccccceEEEEEe--CCEEEEEcCCCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEEEcCCeEEEEEecCCCCCCC
Q psy12614 300 IHEGDVKSLALH--GNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDL 377 (708)
Q Consensus 300 ~~~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~ 377 (708)
.|...+.+++++ +.++++++.|+.+++|++.+..
T Consensus 217 ~~~~~i~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~-------------------------------------------- 252 (289)
T cd00200 217 GHENGVNSVAFSPDGYLLASGSEDGTIRVWDLRTGE-------------------------------------------- 252 (289)
T ss_pred hcCCceEEEEEcCCCcEEEEEcCCCcEEEEEcCCce--------------------------------------------
Confidence 788889998888 5666666668888888875422
Q ss_pred CCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEEE-cCCceEEEE
Q psy12614 378 SSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYS-TESCVRLHS 430 (708)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~-~d~~i~i~~ 430 (708)
.......+...+.+++|+|++++++++ .|+.+++|+
T Consensus 253 -----------------~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iw~ 289 (289)
T cd00200 253 -----------------CVQTLSGHTNSVTSLAWSPDGKRLASGSADGTIRIWD 289 (289)
T ss_pred -----------------eEEEccccCCcEEEEEECCCCCEEEEecCCCeEEecC
Confidence 111122556778899999998888884 488999985
|
|
| >KOG0293|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-31 Score=241.18 Aligned_cols=283 Identities=13% Similarity=0.140 Sum_probs=232.1
Q ss_pred EEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECCCC---eEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEE
Q psy12614 63 RVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMRRL---NIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINL 137 (708)
Q Consensus 63 ~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~---~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~i 137 (708)
+++..|. ..|.-+.|| |++||+++.|.+..+|++..- +..+++.+|..+|..+.||||.++|++++.|..+.+
T Consensus 218 qil~~ht--dEVWfl~FS~nGkyLAsaSkD~Taiiw~v~~d~~~kl~~tlvgh~~~V~yi~wSPDdryLlaCg~~e~~~l 295 (519)
T KOG0293|consen 218 QILQDHT--DEVWFLQFSHNGKYLASASKDSTAIIWIVVYDVHFKLKKTLVGHSQPVSYIMWSPDDRYLLACGFDEVLSL 295 (519)
T ss_pred hhHhhCC--CcEEEEEEcCCCeeEeeccCCceEEEEEEecCcceeeeeeeecccCceEEEEECCCCCeEEecCchHheee
Confidence 3788999 999999999 999999999999999987654 457889999999999999999999999999999999
Q ss_pred EEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE
Q psy12614 138 FQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT 216 (708)
Q Consensus 138 wd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 216 (708)
||+.+|+..... -.++...+.+++|.|||..+++|+.| ++..||+. |..+......+ ...|.+++.++||+
T Consensus 296 wDv~tgd~~~~y-~~~~~~S~~sc~W~pDg~~~V~Gs~dr~i~~wdlD-gn~~~~W~gvr------~~~v~dlait~Dgk 367 (519)
T KOG0293|consen 296 WDVDTGDLRHLY-PSGLGFSVSSCAWCPDGFRFVTGSPDRTIIMWDLD-GNILGNWEGVR------DPKVHDLAITYDGK 367 (519)
T ss_pred ccCCcchhhhhc-ccCcCCCcceeEEccCCceeEecCCCCcEEEecCC-cchhhcccccc------cceeEEEEEcCCCc
Confidence 999999985311 22346889999999999999999999 99999985 55555554332 56799999999996
Q ss_pred -EEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEe
Q psy12614 217 -IITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRS 295 (708)
Q Consensus 217 -l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~ 295 (708)
+++.+.|..|++++.++......+. ...+|++++.|.|++++++--.+..+++||++. .. ..
T Consensus 368 ~vl~v~~d~~i~l~~~e~~~dr~lis-e~~~its~~iS~d~k~~LvnL~~qei~LWDl~e--------~~--------lv 430 (519)
T KOG0293|consen 368 YVLLVTVDKKIRLYNREARVDRGLIS-EEQPITSFSISKDGKLALVNLQDQEIHLWDLEE--------NK--------LV 430 (519)
T ss_pred EEEEEecccceeeechhhhhhhcccc-ccCceeEEEEcCCCcEEEEEcccCeeEEeecch--------hh--------HH
Confidence 8888899999999988766554444 568899999999999999999999999999987 32 45
Q ss_pred EEEeccccc--eEEEEEe---CCEEEEEcCCCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEEEcCCeEEEEEec
Q psy12614 296 VNRVIHEGD--VKSLALH---GNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSLG 370 (708)
Q Consensus 296 ~~~~~~~~~--v~~l~~~---~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~ 370 (708)
..+.+|... +..-+|. ..++++|+.|+.|+||+..++
T Consensus 431 ~kY~Ghkq~~fiIrSCFgg~~~~fiaSGSED~kvyIWhr~sg-------------------------------------- 472 (519)
T KOG0293|consen 431 RKYFGHKQGHFIIRSCFGGGNDKFIASGSEDSKVYIWHRISG-------------------------------------- 472 (519)
T ss_pred HHhhcccccceEEEeccCCCCcceEEecCCCceEEEEEccCC--------------------------------------
Confidence 556666554 3344555 478999999999988877443
Q ss_pred CCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEE-EE-EcCCceEEEEEEe
Q psy12614 371 SAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYV-AY-STESCVRLHSLDL 433 (708)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l-~~-~~d~~i~i~~~~~ 433 (708)
+++....+|...|.+++|+|....+ |+ |+||+|+||....
T Consensus 473 -----------------------kll~~LsGHs~~vNcVswNP~~p~m~ASasDDgtIRIWg~~~ 514 (519)
T KOG0293|consen 473 -----------------------KLLAVLSGHSKTVNCVSWNPADPEMFASASDDGTIRIWGPSD 514 (519)
T ss_pred -----------------------ceeEeecCCcceeeEEecCCCCHHHhhccCCCCeEEEecCCc
Confidence 4566667899999999999977654 55 5699999998764
|
|
| >KOG0643|consensus | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.7e-30 Score=221.63 Aligned_cols=290 Identities=16% Similarity=0.242 Sum_probs=241.2
Q ss_pred eccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEEC
Q psy12614 21 FYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDM 98 (708)
Q Consensus 21 ~~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~ 98 (708)
.++||..+++.+.|+.+|.+|.+++.|.++.+|-..+|+.+. ++.||. +.|.++..+ .++|++|+.|.++++||+
T Consensus 5 ~l~GHERplTqiKyN~eGDLlFscaKD~~~~vw~s~nGerlG-ty~GHt--GavW~~Did~~s~~liTGSAD~t~kLWDv 81 (327)
T KOG0643|consen 5 LLQGHERPLTQIKYNREGDLLFSCAKDSTPTVWYSLNGERLG-TYDGHT--GAVWCCDIDWDSKHLITGSADQTAKLWDV 81 (327)
T ss_pred ccccCccccceEEecCCCcEEEEecCCCCceEEEecCCceee-eecCCC--ceEEEEEecCCcceeeeccccceeEEEEc
Confidence 568999999999999999999999999999999999999998 999999 999999998 899999999999999999
Q ss_pred CCCeEeEEEeecCCceEEEEEecCCCEEEEEeC-----CCcEEEEEccC-------CcEEEEEecccccccEEEEEECCC
Q psy12614 99 RRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTE-----QGHINLFQISD-------EGLLYEKLLDRQQGRILCTAWHSS 166 (708)
Q Consensus 99 ~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~-----d~~i~iwd~~~-------~~~~~~~~~~~~~~~v~~~~~s~d 166 (708)
++|+++..++. ..+|..+.|+++|++++...+ .+.|.++|++. .+.. ..+..+...++.+.|.|-
T Consensus 82 ~tGk~la~~k~-~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~--~kI~t~~skit~a~Wg~l 158 (327)
T KOG0643|consen 82 ETGKQLATWKT-NSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPY--LKIPTPDSKITSALWGPL 158 (327)
T ss_pred CCCcEEEEeec-CCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChhhhcccCce--EEecCCccceeeeeeccc
Confidence 99999999875 478999999999998877654 46799999983 3333 455667789999999999
Q ss_pred CCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCeeEEEeeccc
Q psy12614 167 GDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDVKTHK 244 (708)
Q Consensus 167 ~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~~~~~ 244 (708)
+++|++|..+ .|.+||+++|..+..-... |...|+.+.+++|.+ +++++.|.+-++||..+.+.++++. ..
T Consensus 159 ~~~ii~Ghe~G~is~~da~~g~~~v~s~~~------h~~~Ind~q~s~d~T~FiT~s~Dttakl~D~~tl~v~Kty~-te 231 (327)
T KOG0643|consen 159 GETIIAGHEDGSISIYDARTGKELVDSDEE------HSSKINDLQFSRDRTYFITGSKDTTAKLVDVRTLEVLKTYT-TE 231 (327)
T ss_pred CCEEEEecCCCcEEEEEcccCceeeechhh------hccccccccccCCcceEEecccCccceeeeccceeeEEEee-ec
Confidence 9999999999 9999999998776555433 377999999999996 9999999999999999999999987 56
Q ss_pred cCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcce------EEeEEEeccccceEEEEEe--CCEEE
Q psy12614 245 KDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVW------VRSVNRVIHEGDVKSLALH--GNRLY 316 (708)
Q Consensus 245 ~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~------~~~~~~~~~~~~v~~l~~~--~~~l~ 316 (708)
.+|++.+++|-...++.|+.....-+=.... +.|+ -+.++ .......+|-++|.+++|+ |...+
T Consensus 232 ~PvN~aaisP~~d~VilgGGqeA~dVTTT~~------r~GK--FEArFyh~i~eEEigrvkGHFGPINsvAfhPdGksYs 303 (327)
T KOG0643|consen 232 RPVNTAAISPLLDHVILGGGQEAMDVTTTST------RAGK--FEARFYHLIFEEEIGRVKGHFGPINSVAFHPDGKSYS 303 (327)
T ss_pred ccccceecccccceEEecCCceeeeeeeecc------cccc--hhhhHHHHHHHHHhccccccccCcceeEECCCCcccc
Confidence 8999999999888888776432222211111 0011 00000 1345678999999999999 89999
Q ss_pred EEcCCCeEEEEeCCC
Q psy12614 317 SGGLDSYLSLSYYPP 331 (708)
Q Consensus 317 s~~~d~~i~iw~~~~ 331 (708)
+|+.||.|++.-++.
T Consensus 304 SGGEDG~VR~h~Fd~ 318 (327)
T KOG0643|consen 304 SGGEDGYVRLHHFDS 318 (327)
T ss_pred cCCCCceEEEEEecc
Confidence 999999999976543
|
|
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.6e-29 Score=276.79 Aligned_cols=312 Identities=11% Similarity=0.153 Sum_probs=243.1
Q ss_pred CCcEEEEeCCCCCeEEE----EEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECCCC----e----EeEEEeecCC
Q psy12614 47 DQSIEIWDISETPHVDR----VFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMRRL----N----IKSSTAVTSG 112 (708)
Q Consensus 47 dg~v~iwd~~~~~~~~~----~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~----~----~~~~~~~~~~ 112 (708)
+|.+++|+...-..... .+.+|. +.|.+++|+ +++|++|+.|+.|++||+... . +...+. +..
T Consensus 457 ~gl~~~~~~~~~~~~~~~~~~~~~~~~--~~V~~i~fs~dg~~latgg~D~~I~iwd~~~~~~~~~~~~~~~~~~~-~~~ 533 (793)
T PLN00181 457 EGLCKYLSFSKLRVKADLKQGDLLNSS--NLVCAIGFDRDGEFFATAGVNKKIKIFECESIIKDGRDIHYPVVELA-SRS 533 (793)
T ss_pred hhhhhhhcccceEEEEeeccccccCCC--CcEEEEEECCCCCEEEEEeCCCEEEEEECCcccccccccccceEEec-ccC
Confidence 67789999886444321 233477 899999999 899999999999999997642 1 222333 346
Q ss_pred ceEEEEEec-CCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECC-CCCEEEEecCC-eEEEEEcCCCceE
Q psy12614 113 TCWCLSVHK-KKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHS-SGDYLVTGCAA-AVRVWDIHKGHAI 189 (708)
Q Consensus 113 ~v~~~~~s~-~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~-d~~~l~~~~~d-~i~iwd~~~~~~~ 189 (708)
.+.+++|++ ++.+||+++.||.|++||+.+++.. ..+.+|.+.|.+++|+| ++.+|++++.| .|++||+.++..+
T Consensus 534 ~v~~l~~~~~~~~~las~~~Dg~v~lWd~~~~~~~--~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~~ 611 (793)
T PLN00181 534 KLSGICWNSYIKSQVASSNFEGVVQVWDVARSQLV--TEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSI 611 (793)
T ss_pred ceeeEEeccCCCCEEEEEeCCCeEEEEECCCCeEE--EEecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCcEE
Confidence 799999987 4789999999999999999988876 67889999999999996 78999999999 9999999999888
Q ss_pred EEEEecccCCCCCceeEEEEEEcc-CCE-EEEEcCCCcEEEEeCCCCe-eEEEeeccccCeEEEEEeCCCCEEEEEecCC
Q psy12614 190 HKMSLDKSSKFSKNTAVWCVAFCA-DFT-IITGDSGGFVRFWDGKTGV-QWSDVKTHKKDILALTVSEDENYLYCAGVDP 266 (708)
Q Consensus 190 ~~~~~~~~~~~~~~~~v~~~~~~~-~~~-l~~~~~dg~i~~wd~~~~~-~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg 266 (708)
..+.. ...+.++.|.+ ++. +++|+.||.|++||+++++ .+..+.+|...|.++.|. ++.+|++++.|+
T Consensus 612 ~~~~~--------~~~v~~v~~~~~~g~~latgs~dg~I~iwD~~~~~~~~~~~~~h~~~V~~v~f~-~~~~lvs~s~D~ 682 (793)
T PLN00181 612 GTIKT--------KANICCVQFPSESGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHSKTVSYVRFV-DSSTLVSSSTDN 682 (793)
T ss_pred EEEec--------CCCeEEEEEeCCCCCEEEEEeCCCeEEEEECCCCCccceEecCCCCCEEEEEEe-CCCEEEEEECCC
Confidence 77753 35688999964 564 9999999999999998765 467788999999999997 678999999999
Q ss_pred eEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEEEcCCCeEEEEeCCCCceeecCccCCCC
Q psy12614 267 TVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQS 344 (708)
Q Consensus 267 ~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~ 344 (708)
.|++||+.. +. ....+.....+.+|...+..++++ +.+|++|+.|+.+++|+.......
T Consensus 683 ~ikiWd~~~--------~~--~~~~~~~l~~~~gh~~~i~~v~~s~~~~~lasgs~D~~v~iw~~~~~~~~--------- 743 (793)
T PLN00181 683 TLKLWDLSM--------SI--SGINETPLHSFMGHTNVKNFVGLSVSDGYIATGSETNEVFVYHKAFPMPV--------- 743 (793)
T ss_pred EEEEEeCCC--------Cc--cccCCcceEEEcCCCCCeeEEEEcCCCCEEEEEeCCCEEEEEECCCCCce---------
Confidence 999999975 21 011122466788999999999998 889999999999999997543200
Q ss_pred ceEEEEcCCcEEEEEcCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEE-EEEecCCCceEEEEeCCCCcEEEEEc-
Q psy12614 345 TPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIV-KMSAVNNATIRCSVVSNDGKYVAYST- 422 (708)
Q Consensus 345 ~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~~~s~~g~~l~~~~- 422 (708)
..|...... .+. .....+...|.+++|+|++..|+++.
T Consensus 744 --------------------~s~~~~~~~--------------------~~~~~~~~~~~~~V~~v~ws~~~~~lva~~~ 783 (793)
T PLN00181 744 --------------------LSYKFKTID--------------------PVSGLEVDDASQFISSVCWRGQSSTLVAANS 783 (793)
T ss_pred --------------------EEEecccCC--------------------cccccccCCCCcEEEEEEEcCCCCeEEEecC
Confidence 011111100 000 00123456799999999999999865
Q ss_pred CCceEEEEE
Q psy12614 423 ESCVRLHSL 431 (708)
Q Consensus 423 d~~i~i~~~ 431 (708)
+|.|+||++
T Consensus 784 dG~I~i~~~ 792 (793)
T PLN00181 784 TGNIKILEM 792 (793)
T ss_pred CCcEEEEec
Confidence 999999986
|
|
| >KOG0643|consensus | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.4e-30 Score=219.84 Aligned_cols=294 Identities=17% Similarity=0.229 Sum_probs=229.8
Q ss_pred EEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEcc
Q psy12614 64 VFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQIS 141 (708)
Q Consensus 64 ~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~ 141 (708)
.++||+ .+++.+.|+ |++|++++.|.+..+|-..+|+.+.++.+|.+.|+|++.+.+.+++++|+.|.++++||++
T Consensus 5 ~l~GHE--RplTqiKyN~eGDLlFscaKD~~~~vw~s~nGerlGty~GHtGavW~~Did~~s~~liTGSAD~t~kLWDv~ 82 (327)
T KOG0643|consen 5 LLQGHE--RPLTQIKYNREGDLLFSCAKDSTPTVWYSLNGERLGTYDGHTGAVWCCDIDWDSKHLITGSADQTAKLWDVE 82 (327)
T ss_pred ccccCc--cccceEEecCCCcEEEEecCCCCceEEEecCCceeeeecCCCceEEEEEecCCcceeeeccccceeEEEEcC
Confidence 688999 999999999 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEEEEecccccccEEEEEECCCCCEEEEecCC------eEEEEEcC-------CCceEEEEEecccCCCCCceeEEE
Q psy12614 142 DEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA------AVRVWDIH-------KGHAIHKMSLDKSSKFSKNTAVWC 208 (708)
Q Consensus 142 ~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d------~i~iwd~~-------~~~~~~~~~~~~~~~~~~~~~v~~ 208 (708)
+|+++. .+ ....+|..+.|+++|++++.+..+ .|.++|++ ..++..++... +..++.
T Consensus 83 tGk~la--~~-k~~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~-------~skit~ 152 (327)
T KOG0643|consen 83 TGKQLA--TW-KTNSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTP-------DSKITS 152 (327)
T ss_pred CCcEEE--Ee-ecCCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEecCC-------ccceee
Confidence 999973 33 246789999999999998877653 58999998 34556666654 788999
Q ss_pred EEEccCCE-EEEEcCCCcEEEEeCCCCe-eEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCC
Q psy12614 209 VAFCADFT-IITGDSGGFVRFWDGKTGV-QWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPE 286 (708)
Q Consensus 209 ~~~~~~~~-l~~~~~dg~i~~wd~~~~~-~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~ 286 (708)
+.|.|-++ +++|..+|.|..||+++|+ .+.....|...|+.+.+++|..++++++.|.+-++||..+ -+
T Consensus 153 a~Wg~l~~~ii~Ghe~G~is~~da~~g~~~v~s~~~h~~~Ind~q~s~d~T~FiT~s~Dttakl~D~~t--------l~- 223 (327)
T KOG0643|consen 153 ALWGPLGETIIAGHEDGSISIYDARTGKELVDSDEEHSSKINDLQFSRDRTYFITGSKDTTAKLVDVRT--------LE- 223 (327)
T ss_pred eeecccCCEEEEecCCCcEEEEEcccCceeeechhhhccccccccccCCcceEEecccCccceeeeccc--------ee-
Confidence 99999885 9999999999999999984 4566678999999999999999999999999999999998 21
Q ss_pred CCCcceEEeEEEeccccceEEEEEe--CCEEEEEcCCCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEEEcCCeE
Q psy12614 287 QGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHL 364 (708)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i 364 (708)
.+.++ .-..+|.+.+++ .+.++.|+.....-+=-...+. |+ =..
T Consensus 224 -------v~Kty-~te~PvN~aaisP~~d~VilgGGqeA~dVTTT~~r~-------------------GK-------FEA 269 (327)
T KOG0643|consen 224 -------VLKTY-TTERPVNTAAISPLLDHVILGGGQEAMDVTTTSTRA-------------------GK-------FEA 269 (327)
T ss_pred -------eEEEe-eecccccceecccccceEEecCCceeeeeeeecccc-------------------cc-------hhh
Confidence 22222 234667777777 4455554433222111000000 00 001
Q ss_pred EEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEEE-cCCceEEEEEEe
Q psy12614 365 ELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYS-TESCVRLHSLDL 433 (708)
Q Consensus 365 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~-~d~~i~i~~~~~ 433 (708)
++|++-..+ ++-+ ..+|-++|.++||+|+|+..++| .||.|++..++.
T Consensus 270 rFyh~i~eE--------------------Eigr-vkGHFGPINsvAfhPdGksYsSGGEDG~VR~h~Fd~ 318 (327)
T KOG0643|consen 270 RFYHLIFEE--------------------EIGR-VKGHFGPINSVAFHPDGKSYSSGGEDGYVRLHHFDS 318 (327)
T ss_pred hHHHHHHHH--------------------Hhcc-ccccccCcceeEECCCCcccccCCCCceEEEEEecc
Confidence 223322211 2222 24788999999999999999995 499999998764
|
|
| >KOG0294|consensus | Back alignment and domain information |
|---|
Probab=99.98 E-value=4e-30 Score=224.81 Aligned_cols=247 Identities=14% Similarity=0.316 Sum_probs=218.3
Q ss_pred ceeeeeeeeccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe----CCEEEEEc
Q psy12614 13 TYGVHNIKFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF----NDRLFSGG 88 (708)
Q Consensus 13 ~~~~~~~~~~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~----~~~l~s~~ 88 (708)
...+.....+..|.++|+++|.+ +.++|+|+.|-+|+|||+.+...+. .+..|. +.|+++.|. ...|++|+
T Consensus 30 ~~~l~~lF~~~aH~~sitavAVs--~~~~aSGssDetI~IYDm~k~~qlg-~ll~Ha--gsitaL~F~~~~S~shLlS~s 104 (362)
T KOG0294|consen 30 KPTLKPLFAFSAHAGSITALAVS--GPYVASGSSDETIHIYDMRKRKQLG-ILLSHA--GSITALKFYPPLSKSHLLSGS 104 (362)
T ss_pred ceeeeccccccccccceeEEEec--ceeEeccCCCCcEEEEeccchhhhc-ceeccc--cceEEEEecCCcchhheeeec
Confidence 33445566688999999999997 8999999999999999999988887 788898 999999999 34899999
Q ss_pred CCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCC
Q psy12614 89 LQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGD 168 (708)
Q Consensus 89 ~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~ 168 (708)
.||.|.+|+...-.++..+++|.+.|+.++.+|.+++-++.+.|+.+++||+-+|+.-+...+. ..-..+.|+|.|.
T Consensus 105 dDG~i~iw~~~~W~~~~slK~H~~~Vt~lsiHPS~KLALsVg~D~~lr~WNLV~Gr~a~v~~L~---~~at~v~w~~~Gd 181 (362)
T KOG0294|consen 105 DDGHIIIWRVGSWELLKSLKAHKGQVTDLSIHPSGKLALSVGGDQVLRTWNLVRGRVAFVLNLK---NKATLVSWSPQGD 181 (362)
T ss_pred CCCcEEEEEcCCeEEeeeecccccccceeEecCCCceEEEEcCCceeeeehhhcCccceeeccC---CcceeeEEcCCCC
Confidence 9999999999999999999999999999999999999999999999999999998876544443 2334599999999
Q ss_pred EEEEecCCeEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEEEEcCCCcEEEEeCCCCeeEEEeeccccCeE
Q psy12614 169 YLVTGCAAAVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVKTHKKDIL 248 (708)
Q Consensus 169 ~l~~~~~d~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~ 248 (708)
+++.++++.|-+|.+.+-.....+.. ...+.++.|...+.+++|..++.|.+||..+..+...+.+|...|.
T Consensus 182 ~F~v~~~~~i~i~q~d~A~v~~~i~~--------~~r~l~~~~l~~~~L~vG~d~~~i~~~D~ds~~~~~~~~AH~~RVK 253 (362)
T KOG0294|consen 182 HFVVSGRNKIDIYQLDNASVFREIEN--------PKRILCATFLDGSELLVGGDNEWISLKDTDSDTPLTEFLAHENRVK 253 (362)
T ss_pred EEEEEeccEEEEEecccHhHhhhhhc--------cccceeeeecCCceEEEecCCceEEEeccCCCccceeeecchhhee
Confidence 99999999999999988777666643 3557888888888899999999999999999999999999999999
Q ss_pred EEEE--eCCCCEEEEEecCCeEEEEEccC
Q psy12614 249 ALTV--SEDENYLYCAGVDPTVVCFQRTR 275 (708)
Q Consensus 249 ~~~~--s~~~~~l~~~~~dg~i~iw~~~~ 275 (708)
.+.+ .|++.+|++++.||.|++||++.
T Consensus 254 ~i~~~~~~~~~~lvTaSSDG~I~vWd~~~ 282 (362)
T KOG0294|consen 254 DIASYTNPEHEYLVTASSDGFIKVWDIDM 282 (362)
T ss_pred eeEEEecCCceEEEEeccCceEEEEEccc
Confidence 9985 56788999999999999999987
|
|
| >KOG1446|consensus | Back alignment and domain information |
|---|
Probab=99.98 E-value=9.8e-29 Score=217.20 Aligned_cols=287 Identities=13% Similarity=0.126 Sum_probs=241.2
Q ss_pred eeeeccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcC--CCcE
Q psy12614 18 NIKFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGL--QGFV 93 (708)
Q Consensus 18 ~~~~~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~--d~~i 93 (708)
..+.+..-.+.|+++.|+++|.+|+++++|.+++|||..+++++. ++..++ -.|..++|. ...++.++. |.+|
T Consensus 6 ~ak~f~~~~~~i~sl~fs~~G~~litss~dDsl~LYd~~~g~~~~-ti~skk--yG~~~~~Fth~~~~~i~sStk~d~tI 82 (311)
T KOG1446|consen 6 PAKVFRETNGKINSLDFSDDGLLLITSSEDDSLRLYDSLSGKQVK-TINSKK--YGVDLACFTHHSNTVIHSSTKEDDTI 82 (311)
T ss_pred cccccccCCCceeEEEecCCCCEEEEecCCCeEEEEEcCCCceee-Eeeccc--ccccEEEEecCCceEEEccCCCCCce
Confidence 344566678899999999999999999999999999999999987 888777 889999998 666666665 8999
Q ss_pred EEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEe
Q psy12614 94 NEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTG 173 (708)
Q Consensus 94 ~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~ 173 (708)
+.-++.+.+.++.+.+|...|.+++.+|-+..+++++.|++|++||++..++.....+ ..-..++|.|+|-++|++
T Consensus 83 ryLsl~dNkylRYF~GH~~~V~sL~~sP~~d~FlS~S~D~tvrLWDlR~~~cqg~l~~----~~~pi~AfDp~GLifA~~ 158 (311)
T KOG1446|consen 83 RYLSLHDNKYLRYFPGHKKRVNSLSVSPKDDTFLSSSLDKTVRLWDLRVKKCQGLLNL----SGRPIAAFDPEGLIFALA 158 (311)
T ss_pred EEEEeecCceEEEcCCCCceEEEEEecCCCCeEEecccCCeEEeeEecCCCCceEEec----CCCcceeECCCCcEEEEe
Confidence 9999999999999999999999999999999999999999999999997776522222 223467899999999999
Q ss_pred cCC-eEEEEEcCCC--ceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCeeEEEeeccccCe--
Q psy12614 174 CAA-AVRVWDIHKG--HAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDVKTHKKDI-- 247 (708)
Q Consensus 174 ~~d-~i~iwd~~~~--~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i-- 247 (708)
... .|++||++.- .+...+.... ........+.|+|||+ ++.++..+.+++.|.-+|..+.++.++...-
T Consensus 159 ~~~~~IkLyD~Rs~dkgPF~tf~i~~----~~~~ew~~l~FS~dGK~iLlsT~~s~~~~lDAf~G~~~~tfs~~~~~~~~ 234 (311)
T KOG1446|consen 159 NGSELIKLYDLRSFDKGPFTTFSITD----NDEAEWTDLEFSPDGKSILLSTNASFIYLLDAFDGTVKSTFSGYPNAGNL 234 (311)
T ss_pred cCCCeEEEEEecccCCCCceeEccCC----CCccceeeeEEcCCCCEEEEEeCCCcEEEEEccCCcEeeeEeeccCCCCc
Confidence 988 9999999853 3444444432 2367789999999997 8888889999999999999998887765443
Q ss_pred -EEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEec-cccceEEEEEeCCEEEEEcCCCeEE
Q psy12614 248 -LALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVI-HEGDVKSLALHGNRLYSGGLDSYLS 325 (708)
Q Consensus 248 -~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~v~~l~~~~~~l~s~~~d~~i~ 325 (708)
...+|+||++++++|+.||+|.+|++++ |. ....+.+ +.+++.++.|+..+..-++.+..+.
T Consensus 235 ~~~a~ftPds~Fvl~gs~dg~i~vw~~~t--------g~--------~v~~~~~~~~~~~~~~~fnP~~~mf~sa~s~l~ 298 (311)
T KOG1446|consen 235 PLSATFTPDSKFVLSGSDDGTIHVWNLET--------GK--------KVAVLRGPNGGPVSCVRFNPRYAMFVSASSNLV 298 (311)
T ss_pred ceeEEECCCCcEEEEecCCCcEEEEEcCC--------Cc--------EeeEecCCCCCCccccccCCceeeeeecCceEE
Confidence 6788999999999999999999999999 86 6666666 6888999999977777777788888
Q ss_pred EEeCCC
Q psy12614 326 LSYYPP 331 (708)
Q Consensus 326 iw~~~~ 331 (708)
+|-...
T Consensus 299 fw~p~~ 304 (311)
T KOG1446|consen 299 FWLPDE 304 (311)
T ss_pred EEeccc
Confidence 886543
|
|
| >KOG0274|consensus | Back alignment and domain information |
|---|
Probab=99.98 E-value=7.4e-30 Score=257.72 Aligned_cols=276 Identities=20% Similarity=0.366 Sum_probs=249.3
Q ss_pred CCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECCCCe
Q psy12614 25 EPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMRRLN 102 (708)
Q Consensus 25 h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~~ 102 (708)
+...++|..|. ..++++++.+++|++||..++..+...+.||. +.|.++++. +++|++|+.|.++++||..+|+
T Consensus 207 ~~~~~~~~q~~--~~~~~~~s~~~tl~~~~~~~~~~i~~~l~GH~--g~V~~l~~~~~~~~lvsgS~D~t~rvWd~~sg~ 282 (537)
T KOG0274|consen 207 DDHVVLCLQLH--DGFFKSGSDDSTLHLWDLNNGYLILTRLVGHF--GGVWGLAFPSGGDKLVSGSTDKTERVWDCSTGE 282 (537)
T ss_pred Ccchhhhheee--cCeEEecCCCceeEEeecccceEEEeeccCCC--CCceeEEEecCCCEEEEEecCCcEEeEecCCCc
Confidence 67889999998 56899999999999999999999986699999 999999999 9999999999999999999999
Q ss_pred EeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEE
Q psy12614 103 IKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVW 181 (708)
Q Consensus 103 ~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iw 181 (708)
+...+.+|.+.|.++...+ .++++|+.|.+|++|+++++..+ ..+.+|.++|.++..+ +.++++|+.| +|++|
T Consensus 283 C~~~l~gh~stv~~~~~~~--~~~~sgs~D~tVkVW~v~n~~~l--~l~~~h~~~V~~v~~~--~~~lvsgs~d~~v~VW 356 (537)
T KOG0274|consen 283 CTHSLQGHTSSVRCLTIDP--FLLVSGSRDNTVKVWDVTNGACL--NLLRGHTGPVNCVQLD--EPLLVSGSYDGTVKVW 356 (537)
T ss_pred EEEEecCCCceEEEEEccC--ceEeeccCCceEEEEeccCcceE--EEeccccccEEEEEec--CCEEEEEecCceEEEE
Confidence 9999999999999988755 46788899999999999999987 7788899999999997 8899999999 99999
Q ss_pred EcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEEEEcCCCcEEEEeCCCC-eeEEEeeccccCeEEEEEeCCCCEEE
Q psy12614 182 DIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTG-VQWSDVKTHKKDILALTVSEDENYLY 260 (708)
Q Consensus 182 d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~wd~~~~-~~~~~~~~~~~~i~~~~~s~~~~~l~ 260 (708)
|+.+++++..+. +|...|.++.+.+...+++|+.|+.|++||+++. +++.++.+|..-+..+.+ .++.|+
T Consensus 357 ~~~~~~cl~sl~-------gH~~~V~sl~~~~~~~~~Sgs~D~~IkvWdl~~~~~c~~tl~~h~~~v~~l~~--~~~~Lv 427 (537)
T KOG0274|consen 357 DPRTGKCLKSLS-------GHTGRVYSLIVDSENRLLSGSLDTTIKVWDLRTKRKCIHTLQGHTSLVSSLLL--RDNFLV 427 (537)
T ss_pred Ehhhceeeeeec-------CCcceEEEEEecCcceEEeeeeccceEeecCCchhhhhhhhcCCccccccccc--ccceeE
Confidence 999999999998 4599999998887667999999999999999999 999999999998866655 567999
Q ss_pred EEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEec-cccceEEEEEeCCEEEEEcCCCeEEEEeCCCCcee
Q psy12614 261 CAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVI-HEGDVKSLALHGNRLYSGGLDSYLSLSYYPPKTLV 335 (708)
Q Consensus 261 ~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~v~~l~~~~~~l~s~~~d~~i~iw~~~~~~~~ 335 (708)
+++.|+.|++||..+ ++ ....+.+ |...|..+++....+++++.|+.+++||+++..+.
T Consensus 428 s~~aD~~Ik~WD~~~--------~~--------~~~~~~~~~~~~v~~l~~~~~~il~s~~~~~~~l~dl~~~~~~ 487 (537)
T KOG0274|consen 428 SSSADGTIKLWDAEE--------GE--------CLRTLEGRHVGGVSALALGKEEILCSSDDGSVKLWDLRSGTLI 487 (537)
T ss_pred eccccccEEEeeccc--------Cc--------eeeeeccCCcccEEEeecCcceEEEEecCCeeEEEecccCchh
Confidence 999999999999999 76 6667777 66888888887789999999999999999987733
|
|
| >KOG0283|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.1e-30 Score=255.01 Aligned_cols=252 Identities=17% Similarity=0.256 Sum_probs=212.8
Q ss_pred eeeeecc-CCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCC--------------------------------CC----
Q psy12614 17 HNIKFYA-PEPKVINCIACEPKSSRLAVSRADQSIEIWDISE--------------------------------TP---- 59 (708)
Q Consensus 17 ~~~~~~~-~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~--------------------------------~~---- 59 (708)
+.++-+. +|.+.|.++.||+||+|||+|++||.|+||.+.. ..
T Consensus 257 ~~~Qe~~~ah~gaIw~mKFS~DGKyLAsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~ 336 (712)
T KOG0283|consen 257 TVVQEISNAHKGAIWAMKFSHDGKYLASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRT 336 (712)
T ss_pred EEeeccccccCCcEEEEEeCCCCceeeecCCCceEEEEEEeccchhcccccccchhhhhhhhccccCccccccccccccc
Confidence 3445566 9999999999999999999999999999998765 00
Q ss_pred -----------------------eEEEEEecCCCCCcEEEEEEe-CCEEEEEcCCCcEEEEECCCCeEeEEEeecCCceE
Q psy12614 60 -----------------------HVDRVFIGDPLSNSIECLTWF-NDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCW 115 (708)
Q Consensus 60 -----------------------~~~~~~~~h~~~~~v~~l~~~-~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~ 115 (708)
...+.+.||. +.|..|.|+ .++|++++-|.+|++|++....+++.|. |..-|+
T Consensus 337 s~~~~~~~s~~~~~p~~~f~f~ekP~~ef~GHt--~DILDlSWSKn~fLLSSSMDKTVRLWh~~~~~CL~~F~-HndfVT 413 (712)
T KOG0283|consen 337 SSSRKGSQSPCVLLPLKAFVFSEKPFCEFKGHT--ADILDLSWSKNNFLLSSSMDKTVRLWHPGRKECLKVFS-HNDFVT 413 (712)
T ss_pred cccccccCCccccCCCccccccccchhhhhccc--hhheecccccCCeeEeccccccEEeecCCCcceeeEEe-cCCeeE
Confidence 0012566899 999999999 9999999999999999999999998885 889999
Q ss_pred EEEEec-CCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEE
Q psy12614 116 CLSVHK-KKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMS 193 (708)
Q Consensus 116 ~~~~s~-~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~ 193 (708)
|++|+| |.+++++|+-|+.|+||++...++. ....-..-|++++|.|||++.++|+.+ .+++|+....+......
T Consensus 414 cVaFnPvDDryFiSGSLD~KvRiWsI~d~~Vv---~W~Dl~~lITAvcy~PdGk~avIGt~~G~C~fY~t~~lk~~~~~~ 490 (712)
T KOG0283|consen 414 CVAFNPVDDRYFISGSLDGKVRLWSISDKKVV---DWNDLRDLITAVCYSPDGKGAVIGTFNGYCRFYDTEGLKLVSDFH 490 (712)
T ss_pred EEEecccCCCcEeecccccceEEeecCcCeeE---eehhhhhhheeEEeccCCceEEEEEeccEEEEEEccCCeEEEeee
Confidence 999999 7889999999999999999998885 333445889999999999999999999 99999998887776665
Q ss_pred eccc--CCCCCceeEEEEEEccCC--EEEEEcCCCcEEEEeCCCCeeEEEeecccc--CeEEEEEeCCCCEEEEEecCCe
Q psy12614 194 LDKS--SKFSKNTAVWCVAFCADF--TIITGDSGGFVRFWDGKTGVQWSDVKTHKK--DILALTVSEDENYLYCAGVDPT 267 (708)
Q Consensus 194 ~~~~--~~~~~~~~v~~~~~~~~~--~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~--~i~~~~~s~~~~~l~~~~~dg~ 267 (708)
.... .. .....|+.+.|.|.. ++++.+.|..|+|||.++..++..+++... .=....|+.||++|++++.|..
T Consensus 491 I~~~~~Kk-~~~~rITG~Q~~p~~~~~vLVTSnDSrIRI~d~~~~~lv~KfKG~~n~~SQ~~Asfs~Dgk~IVs~seDs~ 569 (712)
T KOG0283|consen 491 IRLHNKKK-KQGKRITGLQFFPGDPDEVLVTSNDSRIRIYDGRDKDLVHKFKGFRNTSSQISASFSSDGKHIVSASEDSW 569 (712)
T ss_pred EeeccCcc-ccCceeeeeEecCCCCCeEEEecCCCceEEEeccchhhhhhhcccccCCcceeeeEccCCCEEEEeecCce
Confidence 4421 11 112379999999855 599999999999999988888888886432 3356789999999999999999
Q ss_pred EEEEEccC
Q psy12614 268 VVCFQRTR 275 (708)
Q Consensus 268 i~iw~~~~ 275 (708)
|++|+...
T Consensus 570 VYiW~~~~ 577 (712)
T KOG0283|consen 570 VYIWKNDS 577 (712)
T ss_pred EEEEeCCC
Confidence 99999876
|
|
| >KOG1407|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.2e-29 Score=211.12 Aligned_cols=272 Identities=15% Similarity=0.239 Sum_probs=234.1
Q ss_pred eeccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEE-EEEecCCCCCcEEEEEEe---CCEEEEEcCCCcEEE
Q psy12614 20 KFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVD-RVFIGDPLSNSIECLTWF---NDRLFSGGLQGFVNE 95 (708)
Q Consensus 20 ~~~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~-~~~~~h~~~~~v~~l~~~---~~~l~s~~~d~~i~v 95 (708)
|-+++|.+.|.+++|+.+|..||+|+.|+++.+|++...+... ....||. +.|..++|. .+.+++++.|.+|++
T Consensus 14 r~~~~~~~~v~Sv~wn~~g~~lasgs~dktv~v~n~e~~r~~~~~~~~gh~--~svdql~w~~~~~d~~atas~dk~ir~ 91 (313)
T KOG1407|consen 14 RELQGHVQKVHSVAWNCDGTKLASGSFDKTVSVWNLERDRFRKELVYRGHT--DSVDQLCWDPKHPDLFATASGDKTIRI 91 (313)
T ss_pred HHhhhhhhcceEEEEcccCceeeecccCCceEEEEecchhhhhhhcccCCC--cchhhheeCCCCCcceEEecCCceEEE
Confidence 6788999999999999999999999999999999999865432 2456888 999999999 889999999999999
Q ss_pred EECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecC
Q psy12614 96 YDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCA 175 (708)
Q Consensus 96 wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~ 175 (708)
||+..+++...+....+.+. +.|+|+|+++++++.|..|.+.|.++.+... -......+..++|+.++.+++....
T Consensus 92 wd~r~~k~~~~i~~~~eni~-i~wsp~g~~~~~~~kdD~it~id~r~~~~~~---~~~~~~e~ne~~w~~~nd~Fflt~G 167 (313)
T KOG1407|consen 92 WDIRSGKCTARIETKGENIN-ITWSPDGEYIAVGNKDDRITFIDARTYKIVN---EEQFKFEVNEISWNNSNDLFFLTNG 167 (313)
T ss_pred EEeccCcEEEEeeccCcceE-EEEcCCCCEEEEecCcccEEEEEecccceee---hhcccceeeeeeecCCCCEEEEecC
Confidence 99999999998887766664 8899999999999999999999999887752 2233456788889877777665555
Q ss_pred C-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEe
Q psy12614 176 A-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVS 253 (708)
Q Consensus 176 d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s 253 (708)
. .|.|......+.+..++.+ .....|+.|+|+|+ +++|+.|..+.+||++..-+++.+.-+.-+|..+.|+
T Consensus 168 lG~v~ILsypsLkpv~si~AH-------~snCicI~f~p~GryfA~GsADAlvSLWD~~ELiC~R~isRldwpVRTlSFS 240 (313)
T KOG1407|consen 168 LGCVEILSYPSLKPVQSIKAH-------PSNCICIEFDPDGRYFATGSADALVSLWDVDELICERCISRLDWPVRTLSFS 240 (313)
T ss_pred CceEEEEeccccccccccccC-------CcceEEEEECCCCceEeeccccceeeccChhHhhhheeeccccCceEEEEec
Confidence 4 9999998888888888754 78889999999996 9999999999999999999999999999999999999
Q ss_pred CCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEEEcCC
Q psy12614 254 EDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSGGLD 321 (708)
Q Consensus 254 ~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~~~d 321 (708)
.||++||+|++|..|-|=+.++ |. .... ..+.++...++|+ ..+|+.++.|
T Consensus 241 ~dg~~lASaSEDh~IDIA~vet--------Gd--------~~~e-I~~~~~t~tVAWHPk~~LLAyA~dd 293 (313)
T KOG1407|consen 241 HDGRMLASASEDHFIDIAEVET--------GD--------RVWE-IPCEGPTFTVAWHPKRPLLAYACDD 293 (313)
T ss_pred cCcceeeccCccceEEeEeccc--------CC--------eEEE-eeccCCceeEEecCCCceeeEEecC
Confidence 9999999999999999999999 75 3333 3567889999999 5677776655
|
|
| >KOG1407|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.1e-29 Score=212.59 Aligned_cols=242 Identities=14% Similarity=0.236 Sum_probs=205.6
Q ss_pred EEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECCCCeEeEE--EeecCCceEEEEEecC-CCEEEEEeCCCcEEE
Q psy12614 63 RVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMRRLNIKSS--TAVTSGTCWCLSVHKK-KRLLAAGTEQGHINL 137 (708)
Q Consensus 63 ~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~~~~~~--~~~~~~~v~~~~~s~~-~~~la~~~~d~~i~i 137 (708)
+.+.+|. ..|.+++|+ |.+|++++.|+++.+|+++..+.... ..+|.+.|-.++|+|. ..++++++.|.+|++
T Consensus 14 r~~~~~~--~~v~Sv~wn~~g~~lasgs~dktv~v~n~e~~r~~~~~~~~gh~~svdql~w~~~~~d~~atas~dk~ir~ 91 (313)
T KOG1407|consen 14 RELQGHV--QKVHSVAWNCDGTKLASGSFDKTVSVWNLERDRFRKELVYRGHTDSVDQLCWDPKHPDLFATASGDKTIRI 91 (313)
T ss_pred HHhhhhh--hcceEEEEcccCceeeecccCCceEEEEecchhhhhhhcccCCCcchhhheeCCCCCcceEEecCCceEEE
Confidence 4677888 999999999 99999999999999999998865544 4589999999999984 568999999999999
Q ss_pred EEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE
Q psy12614 138 FQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT 216 (708)
Q Consensus 138 wd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 216 (708)
||+..++....... .+.-..+.|+|+|++++.++.| .|.+.|.++.+....... ...+.-++|+.++.
T Consensus 92 wd~r~~k~~~~i~~---~~eni~i~wsp~g~~~~~~~kdD~it~id~r~~~~~~~~~~--------~~e~ne~~w~~~nd 160 (313)
T KOG1407|consen 92 WDIRSGKCTARIET---KGENINITWSPDGEYIAVGNKDDRITFIDARTYKIVNEEQF--------KFEVNEISWNNSND 160 (313)
T ss_pred EEeccCcEEEEeec---cCcceEEEEcCCCCEEEEecCcccEEEEEecccceeehhcc--------cceeeeeeecCCCC
Confidence 99999998743332 2334568899999999999999 999999988877766544 56677888886665
Q ss_pred -EEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEe
Q psy12614 217 -IITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRS 295 (708)
Q Consensus 217 -l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~ 295 (708)
++.....|.|.|.....-+++..+++|.....|+.|+|+|+++|+|+.|-.+.+||++. .+..
T Consensus 161 ~Fflt~GlG~v~ILsypsLkpv~si~AH~snCicI~f~p~GryfA~GsADAlvSLWD~~E----------------LiC~ 224 (313)
T KOG1407|consen 161 LFFLTNGLGCVEILSYPSLKPVQSIKAHPSNCICIEFDPDGRYFATGSADALVSLWDVDE----------------LICE 224 (313)
T ss_pred EEEEecCCceEEEEeccccccccccccCCcceEEEEECCCCceEeeccccceeeccChhH----------------hhhh
Confidence 66666679999999999999999999999999999999999999999999999999987 2356
Q ss_pred EEEeccccceEEEEEe--CCEEEEEcCCCeEEEEeCCCCc
Q psy12614 296 VNRVIHEGDVKSLALH--GNRLYSGGLDSYLSLSYYPPKT 333 (708)
Q Consensus 296 ~~~~~~~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~~~ 333 (708)
+.+..+.-+|+.++|+ |++|++++.|..|-|-+++++.
T Consensus 225 R~isRldwpVRTlSFS~dg~~lASaSEDh~IDIA~vetGd 264 (313)
T KOG1407|consen 225 RCISRLDWPVRTLSFSHDGRMLASASEDHFIDIAEVETGD 264 (313)
T ss_pred eeeccccCceEEEEeccCcceeeccCccceEEeEecccCC
Confidence 6777888899999999 9999999999998776665543
|
|
| >KOG0301|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.6e-29 Score=240.78 Aligned_cols=281 Identities=15% Similarity=0.275 Sum_probs=244.8
Q ss_pred ceeeeeeeeccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEE-EEEecCCCCCcEEE-EEEe---CCEEEEE
Q psy12614 13 TYGVHNIKFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVD-RVFIGDPLSNSIEC-LTWF---NDRLFSG 87 (708)
Q Consensus 13 ~~~~~~~~~~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~-~~~~~h~~~~~v~~-l~~~---~~~l~s~ 87 (708)
.|++.+ .+.+|...|..+++.+.. .+++++.||++++|+-..+..+. ..+.+|. +-|.. ++|. +.+|++|
T Consensus 3 ~Y~ls~--~l~gH~~DVr~v~~~~~~-~i~s~sRd~t~~vw~~~~~~~l~~~~~~~~~--g~i~~~i~y~e~~~~~l~~g 77 (745)
T KOG0301|consen 3 QYKLSH--ELEGHKSDVRAVAVTDGV-CIISGSRDGTVKVWAKKGKQYLETHAFEGPK--GFIANSICYAESDKGRLVVG 77 (745)
T ss_pred cceeEE--EeccCccchheeEecCCe-EEeecCCCCceeeeeccCcccccceecccCc--ceeeccceeccccCcceEee
Confidence 344443 789999999999887665 78899999999999997766554 5678888 77777 8877 5679999
Q ss_pred cCCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCC
Q psy12614 88 GLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSG 167 (708)
Q Consensus 88 ~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~ 167 (708)
+.|.+|.+|...+..++.++++|...|.+++...++. +++|+.|.++++|.... +. ..+.+|+..|.++++-|++
T Consensus 78 ~~D~~i~v~~~~~~~P~~~LkgH~snVC~ls~~~~~~-~iSgSWD~TakvW~~~~--l~--~~l~gH~asVWAv~~l~e~ 152 (745)
T KOG0301|consen 78 GMDTTIIVFKLSQAEPLYTLKGHKSNVCSLSIGEDGT-LISGSWDSTAKVWRIGE--LV--YSLQGHTASVWAVASLPEN 152 (745)
T ss_pred cccceEEEEecCCCCchhhhhccccceeeeecCCcCc-eEecccccceEEecchh--hh--cccCCcchheeeeeecCCC
Confidence 9999999999999999999999999999999988887 89999999999998654 33 4589999999999999998
Q ss_pred CEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEEEEcCCCcEEEEeCCCCeeEEEeeccccC
Q psy12614 168 DYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVKTHKKD 246 (708)
Q Consensus 168 ~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~ 246 (708)
.+++|+.| +|++|.- ++.++++. +|...|+.+++.+++.+++++.||.|++|++ +|+.+..+.+|...
T Consensus 153 -~~vTgsaDKtIklWk~--~~~l~tf~-------gHtD~VRgL~vl~~~~flScsNDg~Ir~w~~-~ge~l~~~~ghtn~ 221 (745)
T KOG0301|consen 153 -TYVTGSADKTIKLWKG--GTLLKTFS-------GHTDCVRGLAVLDDSHFLSCSNDGSIRLWDL-DGEVLLEMHGHTNF 221 (745)
T ss_pred -cEEeccCcceeeeccC--Cchhhhhc-------cchhheeeeEEecCCCeEeecCCceEEEEec-cCceeeeeeccceE
Confidence 78999999 9999984 77777776 4599999999999999999999999999998 79999999999999
Q ss_pred eEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe-CCEEEEEcCCCeEE
Q psy12614 247 ILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH-GNRLYSGGLDSYLS 325 (708)
Q Consensus 247 i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~-~~~l~s~~~d~~i~ 325 (708)
|.+++...++..++++++|+++++|+... ....+......|+++.+- ..-+++|+.||.|+
T Consensus 222 vYsis~~~~~~~Ivs~gEDrtlriW~~~e------------------~~q~I~lPttsiWsa~~L~NgDIvvg~SDG~Vr 283 (745)
T KOG0301|consen 222 VYSISMALSDGLIVSTGEDRTLRIWKKDE------------------CVQVITLPTTSIWSAKVLLNGDIVVGGSDGRVR 283 (745)
T ss_pred EEEEEecCCCCeEEEecCCceEEEeecCc------------------eEEEEecCccceEEEEEeeCCCEEEeccCceEE
Confidence 99999888889999999999999999876 455555556688888877 77899999999999
Q ss_pred EEeCCCC
Q psy12614 326 LSYYPPK 332 (708)
Q Consensus 326 iw~~~~~ 332 (708)
+|..+..
T Consensus 284 VfT~~k~ 290 (745)
T KOG0301|consen 284 VFTVDKD 290 (745)
T ss_pred EEEeccc
Confidence 9987643
|
|
| >KOG0308|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.7e-30 Score=244.19 Aligned_cols=348 Identities=18% Similarity=0.242 Sum_probs=272.1
Q ss_pred CCCCcEE---EEEEc-CCCCEEEEEeCCCcEEEEeCCCCCe-----EEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCc
Q psy12614 24 PEPKVIN---CIACE-PKSSRLAVSRADQSIEIWDISETPH-----VDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGF 92 (708)
Q Consensus 24 ~h~~~v~---~~~~s-~~~~~la~~~~dg~v~iwd~~~~~~-----~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~ 92 (708)
.|...|. ++..+ |.++||.+|+.||.|++|+.....- ....++.|. ..|+.++.. ++.|++++.|-+
T Consensus 19 qn~~~v~~~~~Lq~da~~~ryLfTgGRDg~i~~W~~~~d~~~~s~~~~asme~Hs--DWVNDiiL~~~~~tlIS~SsDtT 96 (735)
T KOG0308|consen 19 QNRNGVNITKALQLDAPNGRYLFTGGRDGIIRLWSVTQDSNEPSTPYIASMEHHS--DWVNDIILCGNGKTLISASSDTT 96 (735)
T ss_pred hccccccchhhccccCCCCceEEecCCCceEEEeccccccCCcccchhhhhhhhH--hHHhhHHhhcCCCceEEecCCce
Confidence 4555555 44454 4667899999999999999975322 123788898 999999988 889999999999
Q ss_pred EEEEECCCC--eEeEEEeecCCceEEEEE-ecCCCEEEEEeCCCcEEEEEccCCcE--------EEEEecc-cccccEEE
Q psy12614 93 VNEYDMRRL--NIKSSTAVTSGTCWCLSV-HKKKRLLAAGTEQGHINLFQISDEGL--------LYEKLLD-RQQGRILC 160 (708)
Q Consensus 93 i~vwd~~~~--~~~~~~~~~~~~v~~~~~-s~~~~~la~~~~d~~i~iwd~~~~~~--------~~~~~~~-~~~~~v~~ 160 (708)
|++|+...+ -+..++..|..-|.|+++ -++..++|+|+-|+.|.+||+.++.. +....+. ++...|.+
T Consensus 97 VK~W~~~~~~~~c~stir~H~DYVkcla~~ak~~~lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~~sl~sG~k~siYS 176 (735)
T KOG0308|consen 97 VKVWNAHKDNTFCMSTIRTHKDYVKCLAYIAKNNELVASGGLDRKIFLWDINTGTATLVASFNNVTVNSLGSGPKDSIYS 176 (735)
T ss_pred EEEeecccCcchhHhhhhcccchheeeeecccCceeEEecCCCccEEEEEccCcchhhhhhccccccccCCCCCccceee
Confidence 999999887 588889999999999999 88888999999999999999997621 1112333 78889999
Q ss_pred EEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCC-EEEEEcCCCcEEEEeCCCCeeEE
Q psy12614 161 TAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADF-TIITGDSGGFVRFWDGKTGVQWS 238 (708)
Q Consensus 161 ~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~~~~~dg~i~~wd~~~~~~~~ 238 (708)
++.++.|..+++|+.. .+++||.++++.+.++. +|...|.++..++|| +++++++||+|++||+...+++.
T Consensus 177 LA~N~t~t~ivsGgtek~lr~wDprt~~kimkLr-------GHTdNVr~ll~~dDGt~~ls~sSDgtIrlWdLgqQrCl~ 249 (735)
T KOG0308|consen 177 LAMNQTGTIIVSGGTEKDLRLWDPRTCKKIMKLR-------GHTDNVRVLLVNDDGTRLLSASSDGTIRLWDLGQQRCLA 249 (735)
T ss_pred eecCCcceEEEecCcccceEEeccccccceeeee-------ccccceEEEEEcCCCCeEeecCCCceEEeeeccccceee
Confidence 9999999999999988 99999999999999988 448999999999999 59999999999999999999999
Q ss_pred EeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEE
Q psy12614 239 DVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLY 316 (708)
Q Consensus 239 ~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~ 316 (708)
++..|...|.++..+|+-..+++|+.||.|..=|+.+ .. ....+....++|..+... .+.+-
T Consensus 250 T~~vH~e~VWaL~~~~sf~~vYsG~rd~~i~~Tdl~n--------~~--------~~tlick~daPv~~l~~~~~~~~~W 313 (735)
T KOG0308|consen 250 TYIVHKEGVWALQSSPSFTHVYSGGRDGNIYRTDLRN--------PA--------KSTLICKEDAPVLKLHLHEHDNSVW 313 (735)
T ss_pred eEEeccCceEEEeeCCCcceEEecCCCCcEEecccCC--------ch--------hheEeecCCCchhhhhhccccCCce
Confidence 9999999999999999999999999999999999987 21 223333445666666666 55557
Q ss_pred EEcCCCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEEEcCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEE
Q psy12614 317 SGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIV 396 (708)
Q Consensus 317 s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (708)
+++.|+.|+-|..... ..+++.+++...+.+......+.....
T Consensus 314 vtTtds~I~rW~~~~~--------------~~l~~s~~~~~~~T~~~~~~~~~~~tp----------------------- 356 (735)
T KOG0308|consen 314 VTTTDSSIKRWKLEPD--------------IALSVSGDLDFFSTDSNNHSCDLTNTP----------------------- 356 (735)
T ss_pred eeeccccceecCCccc--------------cccccCCCCCcccccCCCccccccCCC-----------------------
Confidence 8889999999977432 244444544444444333333322111
Q ss_pred EEEecCCCceEEEEeCCCCcEEEEEc-CCceEEEEEEe
Q psy12614 397 KMSAVNNATIRCSVVSNDGKYVAYST-ESCVRLHSLDL 433 (708)
Q Consensus 397 ~~~~~~~~~i~~~~~s~~g~~l~~~~-d~~i~i~~~~~ 433 (708)
.........|...++-.|.+.+++-+ .|.+.+||+-.
T Consensus 357 ~~vi~Gg~ai~k~~mL~dkRhVlTkDa~gnv~lwDIl~ 394 (735)
T KOG0308|consen 357 DSVIPGGAAIKKHAMLNDKRHVLTKDAKGNVALWDILA 394 (735)
T ss_pred ceeccCchhhhhhhhhcCcceEeeecCCCCEEEEEeee
Confidence 01112334455566667888899855 99999999875
|
|
| >KOG0278|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=8e-30 Score=215.30 Aligned_cols=283 Identities=15% Similarity=0.202 Sum_probs=244.8
Q ss_pred EEEeecCCceEEEEEec---CCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEE
Q psy12614 105 SSTAVTSGTCWCLSVHK---KKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRV 180 (708)
Q Consensus 105 ~~~~~~~~~v~~~~~s~---~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~i 180 (708)
.+..+|..+|..++||| +|-+|++++.|+.-.+-+-++|..+ -+|.+|.+.|.+.+...+....|+++.| +-++
T Consensus 8 l~c~ghtrpvvdl~~s~itp~g~flisa~kd~~pmlr~g~tgdwi--gtfeghkgavw~~~l~~na~~aasaaadftakv 85 (334)
T KOG0278|consen 8 LTCHGHTRPVVDLAFSPITPDGYFLISASKDGKPMLRNGDTGDWI--GTFEGHKGAVWSATLNKNATRAASAAADFTAKV 85 (334)
T ss_pred eEEcCCCcceeEEeccCCCCCceEEEEeccCCCchhccCCCCCcE--EeeeccCcceeeeecCchhhhhhhhcccchhhh
Confidence 34568999999999986 8889999999999888888899998 8999999999999999999999999999 9999
Q ss_pred EEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCC-eeEEEeeccccCeEEEEEeCCCCE
Q psy12614 181 WDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTG-VQWSDVKTHKKDILALTVSEDENY 258 (708)
Q Consensus 181 wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~-~~~~~~~~~~~~i~~~~~s~~~~~ 258 (708)
||.-+|..+..+. |...|.+++|+.|.. |++|+.+..+++||++.. .+...+.+|.+.|..+.|+...+.
T Consensus 86 w~a~tgdelhsf~--------hkhivk~~af~~ds~~lltgg~ekllrvfdln~p~App~E~~ghtg~Ir~v~wc~eD~~ 157 (334)
T KOG0278|consen 86 WDAVTGDELHSFE--------HKHIVKAVAFSQDSNYLLTGGQEKLLRVFDLNRPKAPPKEISGHTGGIRTVLWCHEDKC 157 (334)
T ss_pred hhhhhhhhhhhhh--------hhheeeeEEecccchhhhccchHHHhhhhhccCCCCCchhhcCCCCcceeEEEeccCce
Confidence 9999999998873 477899999999985 999999999999999765 356778899999999999999999
Q ss_pred EEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe-CCEEEEEcCCCeEEEEeCCCCceeec
Q psy12614 259 LYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH-GNRLYSGGLDSYLSLSYYPPKTLVKY 337 (708)
Q Consensus 259 l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~-~~~l~s~~~d~~i~iw~~~~~~~~~~ 337 (708)
++++..|+.|++||.++ |. ....+ ....+|+++.++ ...+++....+.|.+||..+..+.+.
T Consensus 158 iLSSadd~tVRLWD~rT--------gt--------~v~sL-~~~s~VtSlEvs~dG~ilTia~gssV~Fwdaksf~~lKs 220 (334)
T KOG0278|consen 158 ILSSADDKTVRLWDHRT--------GT--------EVQSL-EFNSPVTSLEVSQDGRILTIAYGSSVKFWDAKSFGLLKS 220 (334)
T ss_pred EEeeccCCceEEEEecc--------Cc--------EEEEE-ecCCCCcceeeccCCCEEEEecCceeEEeccccccceee
Confidence 99999999999999999 75 34443 456789999999 66777777888999999998775554
Q ss_pred CccCCCCceEEEEcCCcEEEEE-cCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCc
Q psy12614 338 PCTLAQSTPVSLAKDIQHVLLQ-YTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGK 416 (708)
Q Consensus 338 ~~~~~~~~~~~~s~~~~~l~~~-~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~ 416 (708)
......+.+..++|+...++++ .+..++.||..+++ .+.....+|.++|.|+.|+|||.
T Consensus 221 ~k~P~nV~SASL~P~k~~fVaGged~~~~kfDy~Tge--------------------Ei~~~nkgh~gpVhcVrFSPdGE 280 (334)
T KOG0278|consen 221 YKMPCNVESASLHPKKEFFVAGGEDFKVYKFDYNTGE--------------------EIGSYNKGHFGPVHCVRFSPDGE 280 (334)
T ss_pred ccCccccccccccCCCceEEecCcceEEEEEeccCCc--------------------eeeecccCCCCceEEEEECCCCc
Confidence 4344567788999998877774 88899999999987 44444578999999999999999
Q ss_pred EEEEEc-CCceEEEEEEec
Q psy12614 417 YVAYST-ESCVRLHSLDLD 434 (708)
Q Consensus 417 ~l~~~~-d~~i~i~~~~~~ 434 (708)
..|+|+ ||+|++|....+
T Consensus 281 ~yAsGSEDGTirlWQt~~~ 299 (334)
T KOG0278|consen 281 LYASGSEDGTIRLWQTTPG 299 (334)
T ss_pred eeeccCCCceEEEEEecCC
Confidence 999976 999999998863
|
|
| >KOG1445|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=2e-28 Score=233.42 Aligned_cols=211 Identities=18% Similarity=0.311 Sum_probs=162.4
Q ss_pred eeeeeeccCCCCcEEEEEEcCC-CCEEEEEeCCCcEEEEeCCCCCeEE----EEEecCCCCCcEEEEEEe--CCEEEEEc
Q psy12614 16 VHNIKFYAPEPKVINCIACEPK-SSRLAVSRADQSIEIWDISETPHVD----RVFIGDPLSNSIECLTWF--NDRLFSGG 88 (708)
Q Consensus 16 ~~~~~~~~~h~~~v~~~~~s~~-~~~la~~~~dg~v~iwd~~~~~~~~----~~~~~h~~~~~v~~l~~~--~~~l~s~~ 88 (708)
.+.+-++.+|.+.|+.+.|+|- ..+||+|+.|..|+||.+..+.... ...-||. +-.|.++.|+ .+-|...+
T Consensus 69 ~r~i~~l~~H~d~VtDl~FspF~D~LLAT~S~D~~VKiW~lp~g~~q~LSape~~~g~~-~~~vE~l~fHpTaDgil~s~ 147 (1012)
T KOG1445|consen 69 TRDIGILAAHGDQVTDLGFSPFADELLATCSRDEPVKIWKLPRGHSQKLSAPEIDVGGG-NVIVECLRFHPTADGILASG 147 (1012)
T ss_pred ccccceeecccceeeccCccccchhhhhcccCCCeeEEEecCCCcccccCCcceeecCC-ceEEEEeecccCcCceEEec
Confidence 3455678999999999999994 4679999999999999998543321 1334555 4789999999 55555566
Q ss_pred CCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccC-CcEEEEEecccccc-cEEEEEECCC
Q psy12614 89 LQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISD-EGLLYEKLLDRQQG-RILCTAWHSS 166 (708)
Q Consensus 89 ~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~-~~~~~~~~~~~~~~-~v~~~~~s~d 166 (708)
..|++++||+.+++.+..+.+|...|.++.|+.||.+|++.+.|..|+|||.+. ++.+ +...+|.+ +-..+.|.-+
T Consensus 148 a~g~v~i~D~stqk~~~el~~h~d~vQSa~WseDG~llatscKdkqirifDPRa~~~pi--Q~te~H~~~rdsRv~w~Gn 225 (1012)
T KOG1445|consen 148 AHGSVYITDISTQKTAVELSGHTDKVQSADWSEDGKLLATSCKDKQIRIFDPRASMEPI--QTTEGHGGMRDSRVLWAGN 225 (1012)
T ss_pred cCceEEEEEcccCceeecccCCchhhhccccccCCceEeeecCCcceEEeCCccCCCcc--ccccccccchhheeeeccc
Confidence 779999999999999999999999999999999999999999999999999875 3444 55577764 3346778766
Q ss_pred CCEEEEecCC-----eEEEEEcCC-CceEEEEEecccCCCCCceeEEEEEEccCCE--EEEEcCCCcEEEEeCCCCe
Q psy12614 167 GDYLVTGCAA-----AVRVWDIHK-GHAIHKMSLDKSSKFSKNTAVWCVAFCADFT--IITGDSGGFVRFWDGKTGV 235 (708)
Q Consensus 167 ~~~l~~~~~d-----~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--l~~~~~dg~i~~wd~~~~~ 235 (708)
-..|++.+.+ .|++||... +..+.++.... ...+.--.|.||.+ +++|-.+.++..+.+...+
T Consensus 226 ~~rlisTGF~~~R~reV~~~Dtr~f~~p~~tleld~------stGvLiPl~DpDt~llfLaGKG~~~l~~lE~~d~q 296 (1012)
T KOG1445|consen 226 WERLISTGFTTKRIREVRAYDTRKFGAPVHTLELDS------STGVLIPLYDPDTRLLFLAGKGTNKLFMLEMQDRQ 296 (1012)
T ss_pred hhhhhhcccchhhheeeeeeeccccCCcceeEEeec------ccceEeeeecCCCceEEEecCCcceEEEEEecCCC
Confidence 5677776654 589999875 45566665542 45566667889885 5567777888888876543
|
|
| >KOG0313|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-28 Score=220.29 Aligned_cols=280 Identities=15% Similarity=0.197 Sum_probs=226.6
Q ss_pred CcEEEEEEeCCEEEEEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCC---EEEEEeCCCcEEEEEccCCcEEEE
Q psy12614 72 NSIECLTWFNDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKR---LLAAGTEQGHINLFQISDEGLLYE 148 (708)
Q Consensus 72 ~~v~~l~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~---~la~~~~d~~i~iwd~~~~~~~~~ 148 (708)
..|.++.-.++.+++|+.||.+++||. .|+....+.+|.++|.++++.-... .+++++.|.++++|.++.++....
T Consensus 106 DWVSsv~~~~~~IltgsYDg~~riWd~-~Gk~~~~~~Ght~~ik~v~~v~~n~~~~~fvsas~Dqtl~Lw~~~~~~~~~~ 184 (423)
T KOG0313|consen 106 DWVSSVKGASKWILTGSYDGTSRIWDL-KGKSIKTIVGHTGPIKSVAWVIKNSSSCLFVSASMDQTLRLWKWNVGENKVK 184 (423)
T ss_pred hhhhhhcccCceEEEeecCCeeEEEec-CCceEEEEecCCcceeeeEEEecCCccceEEEecCCceEEEEEecCchhhhh
Confidence 667776666899999999999999995 5688899999999999888754333 599999999999999998765432
Q ss_pred E--ecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCc--eE---------------------EEEEecccCCCCC
Q psy12614 149 K--LLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGH--AI---------------------HKMSLDKSSKFSK 202 (708)
Q Consensus 149 ~--~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~--~~---------------------~~~~~~~~~~~~~ 202 (708)
. .-.+|...|.++...++|..+++|+.| +|.+|+..+.. .. ..... . +|
T Consensus 185 ~~~~~~GHk~~V~sVsv~~sgtr~~SgS~D~~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~~r~P~vtl--~---GH 259 (423)
T KOG0313|consen 185 ALKVCRGHKRSVDSVSVDSSGTRFCSGSWDTMLKIWSVETDEEDELESSSNRRRKKQKREKEGGTRTPLVTL--E---GH 259 (423)
T ss_pred HHhHhcccccceeEEEecCCCCeEEeecccceeeecccCCCccccccccchhhhhhhhhhhcccccCceEEe--c---cc
Confidence 2 234999999999999999999999999 99999933210 00 00111 1 56
Q ss_pred ceeEEEEEEccCCEEEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccC
Q psy12614 203 NTAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCST 282 (708)
Q Consensus 203 ~~~v~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~ 282 (708)
..+|.++.|++.+.+++++.|.+|+.||+.++..+.++.+ ...+.++.++|..++|++|+.|..|++||.++
T Consensus 260 t~~Vs~V~w~d~~v~yS~SwDHTIk~WDletg~~~~~~~~-~ksl~~i~~~~~~~Ll~~gssdr~irl~DPR~------- 331 (423)
T KOG0313|consen 260 TEPVSSVVWSDATVIYSVSWDHTIKVWDLETGGLKSTLTT-NKSLNCISYSPLSKLLASGSSDRHIRLWDPRT------- 331 (423)
T ss_pred ccceeeEEEcCCCceEeecccceEEEEEeecccceeeeec-CcceeEeecccccceeeecCCCCceeecCCCC-------
Confidence 9999999999977899999999999999999999888874 67889999999999999999999999999998
Q ss_pred CCCCCCCcceEEeEEEeccccceEEEEEe---CCEEEEEcCCCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEEE
Q psy12614 283 SGPEQGSSVWVRSVNRVIHEGDVKSLALH---GNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQ 359 (708)
Q Consensus 283 ~g~~~~~~~~~~~~~~~~~~~~v~~l~~~---~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~ 359 (708)
+. .-.....+.+|.+-|.++.|+ ...|++++.|+++++||++...-
T Consensus 332 -~~-----gs~v~~s~~gH~nwVssvkwsp~~~~~~~S~S~D~t~klWDvRS~k~------------------------- 380 (423)
T KOG0313|consen 332 -GD-----GSVVSQSLIGHKNWVSSVKWSPTNEFQLVSGSYDNTVKLWDVRSTKA------------------------- 380 (423)
T ss_pred -CC-----CceeEEeeecchhhhhheecCCCCceEEEEEecCCeEEEEEeccCCC-------------------------
Confidence 42 123567889999999999999 67899999999999999865320
Q ss_pred cCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEE-EcCCceEEEEEE
Q psy12614 360 YTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAY-STESCVRLHSLD 432 (708)
Q Consensus 360 ~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~-~~d~~i~i~~~~ 432 (708)
-+|++ .+|.+.|.++.|.. +.++++ |.|++++|+.-.
T Consensus 381 -----plydI------------------------------~~h~DKvl~vdW~~-~~~IvSGGaD~~l~i~~~~ 418 (423)
T KOG0313|consen 381 -----PLYDI------------------------------AGHNDKVLSVDWNE-GGLIVSGGADNKLRIFKGS 418 (423)
T ss_pred -----cceee------------------------------ccCCceEEEEeccC-CceEEeccCcceEEEeccc
Confidence 12222 25678899999974 556777 459999998654
|
|
| >KOG0305|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.3e-29 Score=240.49 Aligned_cols=239 Identities=18% Similarity=0.317 Sum_probs=216.6
Q ss_pred CCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEec-CCCCCcEEEEEEeCCEEEEEcCCCcEEEEECCCCe
Q psy12614 24 PEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIG-DPLSNSIECLTWFNDRLFSGGLQGFVNEYDMRRLN 102 (708)
Q Consensus 24 ~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~-h~~~~~v~~l~~~~~~l~s~~~d~~i~vwd~~~~~ 102 (708)
.+...|+++.|+++|.+||+|..+|.|.|||..+.+.+. .+.+ |. ..|-+++|.+..+.+|+.|+.|..+|+...+
T Consensus 215 ~~~~~vtSv~ws~~G~~LavG~~~g~v~iwD~~~~k~~~-~~~~~h~--~rvg~laW~~~~lssGsr~~~I~~~dvR~~~ 291 (484)
T KOG0305|consen 215 FGEELVTSVKWSPDGSHLAVGTSDGTVQIWDVKEQKKTR-TLRGSHA--SRVGSLAWNSSVLSSGSRDGKILNHDVRISQ 291 (484)
T ss_pred cCCCceEEEEECCCCCEEEEeecCCeEEEEehhhccccc-cccCCcC--ceeEEEeccCceEEEecCCCcEEEEEEecch
Confidence 348899999999999999999999999999999988887 6676 88 9999999999999999999999999999887
Q ss_pred EeEE-EeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCC-CCEEEEec--CC-e
Q psy12614 103 IKSS-TAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSS-GDYLVTGC--AA-A 177 (708)
Q Consensus 103 ~~~~-~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d-~~~l~~~~--~d-~ 177 (708)
.... +.+|...|..+.|++|+++||+|+.|+.+.|||....+.. ..+..|.+.|.+++|+|- ...||+|+ .| .
T Consensus 292 ~~~~~~~~H~qeVCgLkws~d~~~lASGgnDN~~~Iwd~~~~~p~--~~~~~H~aAVKA~awcP~q~~lLAsGGGs~D~~ 369 (484)
T KOG0305|consen 292 HVVSTLQGHRQEVCGLKWSPDGNQLASGGNDNVVFIWDGLSPEPK--FTFTEHTAAVKALAWCPWQSGLLATGGGSADRC 369 (484)
T ss_pred hhhhhhhcccceeeeeEECCCCCeeccCCCccceEeccCCCcccc--EEEeccceeeeEeeeCCCccCceEEcCCCcccE
Confidence 6555 8899999999999999999999999999999999776666 788899999999999994 46778765 46 9
Q ss_pred EEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCC-EEEE--EcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeC
Q psy12614 178 VRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADF-TIIT--GDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSE 254 (708)
Q Consensus 178 i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~~--~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~ 254 (708)
|++||..+|+.+..+.. ...|..+.|++.. .+++ |..++.|.||+..+.+.+..+.+|...|..++++|
T Consensus 370 i~fwn~~~g~~i~~vdt--------gsQVcsL~Wsk~~kEi~sthG~s~n~i~lw~~ps~~~~~~l~gH~~RVl~la~SP 441 (484)
T KOG0305|consen 370 IKFWNTNTGARIDSVDT--------GSQVCSLIWSKKYKELLSTHGYSENQITLWKYPSMKLVAELLGHTSRVLYLALSP 441 (484)
T ss_pred EEEEEcCCCcEeccccc--------CCceeeEEEcCCCCEEEEecCCCCCcEEEEeccccceeeeecCCcceeEEEEECC
Confidence 99999999999988865 5789999999988 4553 45678999999999999999999999999999999
Q ss_pred CCCEEEEEecCCeEEEEEccC
Q psy12614 255 DENYLYCAGVDPTVVCFQRTR 275 (708)
Q Consensus 255 ~~~~l~~~~~dg~i~iw~~~~ 275 (708)
||..+++|+.|.++++|++-.
T Consensus 442 dg~~i~t~a~DETlrfw~~f~ 462 (484)
T KOG0305|consen 442 DGETIVTGAADETLRFWNLFD 462 (484)
T ss_pred CCCEEEEecccCcEEeccccC
Confidence 999999999999999999976
|
|
| >KOG0274|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.4e-28 Score=245.70 Aligned_cols=280 Identities=20% Similarity=0.287 Sum_probs=242.2
Q ss_pred EEecCCCCCcEEEEEEeCCEEEEEcCCCcEEEEECCCCeEeEE-EeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccC
Q psy12614 64 VFIGDPLSNSIECLTWFNDRLFSGGLQGFVNEYDMRRLNIKSS-TAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISD 142 (708)
Q Consensus 64 ~~~~h~~~~~v~~l~~~~~~l~s~~~d~~i~vwd~~~~~~~~~-~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~ 142 (708)
.+.+|. ...+.+..|.++++++++.|++|++||..++..+.. +.+|.+.|++++|..-+.+|++|+.|.++++||..+
T Consensus 202 ~~~~~~-~~~~~~~q~~~~~~~~~s~~~tl~~~~~~~~~~i~~~l~GH~g~V~~l~~~~~~~~lvsgS~D~t~rvWd~~s 280 (537)
T KOG0274|consen 202 VLLGTD-DHVVLCLQLHDGFFKSGSDDSTLHLWDLNNGYLILTRLVGHFGGVWGLAFPSGGDKLVSGSTDKTERVWDCST 280 (537)
T ss_pred eecccC-cchhhhheeecCeEEecCCCceeEEeecccceEEEeeccCCCCCceeEEEecCCCEEEEEecCCcEEeEecCC
Confidence 344443 477889999999999999999999999999998888 999999999999998888999999999999999999
Q ss_pred CcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEEEEc
Q psy12614 143 EGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGD 221 (708)
Q Consensus 143 ~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~ 221 (708)
|++. ..+.+|.+.|.++... ..++++|+.| +|++|++.++..+..+.. |..+|.++... .+.+++|+
T Consensus 281 g~C~--~~l~gh~stv~~~~~~--~~~~~sgs~D~tVkVW~v~n~~~l~l~~~-------h~~~V~~v~~~-~~~lvsgs 348 (537)
T KOG0274|consen 281 GECT--HSLQGHTSSVRCLTID--PFLLVSGSRDNTVKVWDVTNGACLNLLRG-------HTGPVNCVQLD-EPLLVSGS 348 (537)
T ss_pred CcEE--EEecCCCceEEEEEcc--CceEeeccCCceEEEEeccCcceEEEecc-------ccccEEEEEec-CCEEEEEe
Confidence 9998 8899999999998865 5578889999 999999999999998863 48999999998 55799999
Q ss_pred CCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCC-CCCCCcceEEeEEEec
Q psy12614 222 SGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSG-PEQGSSVWVRSVNRVI 300 (708)
Q Consensus 222 ~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~ 300 (708)
.||.|.+||+.+++++.++.+|...|.++.+.+. +.+++|+.|+.|++||+.+ . + ....+.+
T Consensus 349 ~d~~v~VW~~~~~~cl~sl~gH~~~V~sl~~~~~-~~~~Sgs~D~~IkvWdl~~--------~~~--------c~~tl~~ 411 (537)
T KOG0274|consen 349 YDGTVKVWDPRTGKCLKSLSGHTGRVYSLIVDSE-NRLLSGSLDTTIKVWDLRT--------KRK--------CIHTLQG 411 (537)
T ss_pred cCceEEEEEhhhceeeeeecCCcceEEEEEecCc-ceEEeeeeccceEeecCCc--------hhh--------hhhhhcC
Confidence 9999999999999999999999999999988765 7999999999999999999 4 3 6788899
Q ss_pred cccceEEEEEeCCEEEEEcCCCeEEEEeCCCCceeecCccCCCCceEEEEc-CCcEEEEEcCCeEEEEEecCCC
Q psy12614 301 HEGDVKSLALHGNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAK-DIQHVLLQYTSHLELWSLGSAQ 373 (708)
Q Consensus 301 ~~~~v~~l~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~-~~~~l~~~~~~~i~i~~~~~~~ 373 (708)
|..-+..+.+.++.|++++.|+.|++||..++...............++.. +..++.++.++.+++||+.++.
T Consensus 412 h~~~v~~l~~~~~~Lvs~~aD~~Ik~WD~~~~~~~~~~~~~~~~~v~~l~~~~~~il~s~~~~~~~l~dl~~~~ 485 (537)
T KOG0274|consen 412 HTSLVSSLLLRDNFLVSSSADGTIKLWDAEEGECLRTLEGRHVGGVSALALGKEEILCSSDDGSVKLWDLRSGT 485 (537)
T ss_pred CcccccccccccceeEeccccccEEEeecccCceeeeeccCCcccEEEeecCcceEEEEecCCeeEEEecccCc
Confidence 999998888889999999999999999999988554441212222223333 3556666899999999999877
|
|
| >KOG0300|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-28 Score=215.69 Aligned_cols=292 Identities=13% Similarity=0.199 Sum_probs=251.4
Q ss_pred eeeeeeccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCcE
Q psy12614 16 VHNIKFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGFV 93 (708)
Q Consensus 16 ~~~~~~~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i 93 (708)
..-++.|.||.+.|..++.......+.+++.|.+.+||.++++.++. .+.||. +.|+++.|+ +.++++++.|++-
T Consensus 138 ~~lvre~~GHkDGiW~Vaa~~tqpi~gtASADhTA~iWs~Esg~CL~-~Y~GH~--GSVNsikfh~s~~L~lTaSGD~ta 214 (481)
T KOG0300|consen 138 FRLVRELEGHKDGIWHVAADSTQPICGTASADHTARIWSLESGACLA-TYTGHT--GSVNSIKFHNSGLLLLTASGDETA 214 (481)
T ss_pred EeehhhhcccccceeeehhhcCCcceeecccccceeEEeecccccee-eecccc--cceeeEEeccccceEEEccCCcch
Confidence 34456799999999999999888899999999999999999999998 999999 999999999 8899999999999
Q ss_pred EEEE------CCC----------------------------------CeEeEEEeecCCceEEEEEecCCCEEEEEeCCC
Q psy12614 94 NEYD------MRR----------------------------------LNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQG 133 (708)
Q Consensus 94 ~vwd------~~~----------------------------------~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~ 133 (708)
.||. +.. ..++..+.+|.+.|.+..|-..|+.+++++.|.
T Consensus 215 HIW~~av~~~vP~~~a~~~hSsEeE~e~sDe~~~d~d~~~~sD~~tiRvPl~~ltgH~~vV~a~dWL~gg~Q~vTaSWDR 294 (481)
T KOG0300|consen 215 HIWKAAVNWEVPSNNAPSDHSSEEEEEHSDEHNRDTDSSEKSDGHTIRVPLMRLTGHRAVVSACDWLAGGQQMVTASWDR 294 (481)
T ss_pred HHHHHhhcCcCCCCCCCCCCCchhhhhcccccccccccccccCCceeeeeeeeeeccccceEehhhhcCcceeeeeeccc
Confidence 9996 111 014667889999999999999999999999999
Q ss_pred cEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEc
Q psy12614 134 HINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFC 212 (708)
Q Consensus 134 ~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 212 (708)
+..+||+++++++ ..+.+|....+.++-+|..+++++.+.| +.++||.+ +.+....... +|...|+++.|.
T Consensus 295 TAnlwDVEtge~v--~~LtGHd~ELtHcstHptQrLVvTsSrDtTFRLWDFR--eaI~sV~VFQ----GHtdtVTS~vF~ 366 (481)
T KOG0300|consen 295 TANLWDVETGEVV--NILTGHDSELTHCSTHPTQRLVVTSSRDTTFRLWDFR--EAIQSVAVFQ----GHTDTVTSVVFN 366 (481)
T ss_pred cceeeeeccCcee--ccccCcchhccccccCCcceEEEEeccCceeEeccch--hhcceeeeec----ccccceeEEEEe
Confidence 9999999999998 8999999999999999999999999999 99999987 3333333322 669999999999
Q ss_pred cCCEEEEEcCCCcEEEEeCCCCe-eEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcc
Q psy12614 213 ADFTIITGDSGGFVRFWDGKTGV-QWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSV 291 (708)
Q Consensus 213 ~~~~l~~~~~dg~i~~wd~~~~~-~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~ 291 (708)
.|.++++|+.|.+|++||+++.+ ++.++. ...++..++.+..+..++.--.+..|++||++. . +..
T Consensus 367 ~dd~vVSgSDDrTvKvWdLrNMRsplATIR-tdS~~NRvavs~g~~iIAiPhDNRqvRlfDlnG--------~----Rla 433 (481)
T KOG0300|consen 367 TDDRVVSGSDDRTVKVWDLRNMRSPLATIR-TDSPANRVAVSKGHPIIAIPHDNRQVRLFDLNG--------N----RLA 433 (481)
T ss_pred cCCceeecCCCceEEEeeeccccCcceeee-cCCccceeEeecCCceEEeccCCceEEEEecCC--------C----ccc
Confidence 99999999999999999998864 566666 568899999999888999888889999999986 1 122
Q ss_pred eEEeEEEeccccceEEEEEe----CCEEEEEcCCCeEEEEeCCC
Q psy12614 292 WVRSVNRVIHEGDVKSLALH----GNRLYSGGLDSYLSLSYYPP 331 (708)
Q Consensus 292 ~~~~~~~~~~~~~v~~l~~~----~~~l~s~~~d~~i~iw~~~~ 331 (708)
-.+.....+|...|.+.+|. -.-|+++|.|..+.-|.+..
T Consensus 434 RlPrtsRqgHrRMV~c~AW~eehp~cnLftcGFDR~v~gW~in~ 477 (481)
T KOG0300|consen 434 RLPRTSRQGHRRMVTCCAWLEEHPACNLFTCGFDRMVAGWKINT 477 (481)
T ss_pred cCCcccccccceeeeeeeccccCcccccccccccceeeeeEecc
Confidence 22344567899999999999 45688999999999998864
|
|
| >KOG0288|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-29 Score=229.46 Aligned_cols=279 Identities=14% Similarity=0.195 Sum_probs=238.5
Q ss_pred eeeccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCe-EEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEE
Q psy12614 19 IKFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPH-VDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNE 95 (708)
Q Consensus 19 ~~~~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~-~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~v 95 (708)
.+.+..|.+.+..+.|-++...|++|+.|..|++|+...++. ...++.|.. ++|+++.|. +..+++++.|+.+++
T Consensus 168 ~~~ld~h~gev~~v~~l~~sdtlatgg~Dr~Ik~W~v~~~k~~~~~tLaGs~--g~it~~d~d~~~~~~iAas~d~~~r~ 245 (459)
T KOG0288|consen 168 LFVLDAHEGEVHDVEFLRNSDTLATGGSDRIIKLWNVLGEKSELISTLAGSL--GNITSIDFDSDNKHVIAASNDKNLRL 245 (459)
T ss_pred hhhhhccccccceeEEccCcchhhhcchhhhhhhhhcccchhhhhhhhhccC--CCcceeeecCCCceEEeecCCCceee
Confidence 345788999999999999999999999999999999987662 223788887 999999999 899999999999999
Q ss_pred EECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecC
Q psy12614 96 YDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCA 175 (708)
Q Consensus 96 wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~ 175 (708)
|++...+...++.+|...|+++.|......+++|+.|.+|++||+....+. +++.. ...+..|+.+ ...++++-.
T Consensus 246 Wnvd~~r~~~TLsGHtdkVt~ak~~~~~~~vVsgs~DRtiK~WDl~k~~C~--kt~l~-~S~cnDI~~~--~~~~~SgH~ 320 (459)
T KOG0288|consen 246 WNVDSLRLRHTLSGHTDKVTAAKFKLSHSRVVSGSADRTIKLWDLQKAYCS--KTVLP-GSQCNDIVCS--ISDVISGHF 320 (459)
T ss_pred eeccchhhhhhhcccccceeeehhhccccceeeccccchhhhhhhhhhhee--ccccc-cccccceEec--ceeeeeccc
Confidence 999999999999999999999999988877999999999999999987775 33222 3345566655 556788888
Q ss_pred C-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCeeEEEeec----cccCeEE
Q psy12614 176 A-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDVKT----HKKDILA 249 (708)
Q Consensus 176 d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~~~----~~~~i~~ 249 (708)
| .|++||.++......... .+.|+++..+++|. +++++.|.++.+.|+++.+....+.. .....+.
T Consensus 321 DkkvRfwD~Rs~~~~~sv~~--------gg~vtSl~ls~~g~~lLsssRDdtl~viDlRt~eI~~~~sA~g~k~asDwtr 392 (459)
T KOG0288|consen 321 DKKVRFWDIRSADKTRSVPL--------GGRVTSLDLSMDGLELLSSSRDDTLKVIDLRTKEIRQTFSAEGFKCASDWTR 392 (459)
T ss_pred ccceEEEeccCCceeeEeec--------CcceeeEeeccCCeEEeeecCCCceeeeecccccEEEEeeccccccccccce
Confidence 8 999999999999988876 45899999999995 88999999999999999887777653 2345888
Q ss_pred EEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEecccc--ceEEEEEe--CCEEEEEcCCCeEE
Q psy12614 250 LTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEG--DVKSLALH--GNRLYSGGLDSYLS 325 (708)
Q Consensus 250 ~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~--~v~~l~~~--~~~l~s~~~d~~i~ 325 (708)
+.|||++.|+++|+.||.|+||++.+ |+ ....+..... .|++++|+ |..|++++.++.+.
T Consensus 393 vvfSpd~~YvaAGS~dgsv~iW~v~t--------gK--------lE~~l~~s~s~~aI~s~~W~~sG~~Llsadk~~~v~ 456 (459)
T KOG0288|consen 393 VVFSPDGSYVAAGSADGSVYIWSVFT--------GK--------LEKVLSLSTSNAAITSLSWNPSGSGLLSADKQKAVT 456 (459)
T ss_pred eEECCCCceeeeccCCCcEEEEEccC--------ce--------EEEEeccCCCCcceEEEEEcCCCchhhcccCCcceE
Confidence 99999999999999999999999999 76 4444444433 59999999 99999999999999
Q ss_pred EEe
Q psy12614 326 LSY 328 (708)
Q Consensus 326 iw~ 328 (708)
+|.
T Consensus 457 lW~ 459 (459)
T KOG0288|consen 457 LWT 459 (459)
T ss_pred ecC
Confidence 983
|
|
| >KOG0275|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.3e-30 Score=223.28 Aligned_cols=279 Identities=15% Similarity=0.216 Sum_probs=234.8
Q ss_pred ecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEE------EecccccccEEEEEECCCCCEEEEecCC-eEEEE
Q psy12614 109 VTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYE------KLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVW 181 (708)
Q Consensus 109 ~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~------~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iw 181 (708)
+....+.|..|||||++|++|+.||-|.+||..+|++... ..+--+..+|.|+.||.|...||+|+.| .|++|
T Consensus 211 g~KSh~EcA~FSPDgqyLvsgSvDGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDsEMlAsGsqDGkIKvW 290 (508)
T KOG0275|consen 211 GQKSHVECARFSPDGQYLVSGSVDGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRDSEMLASGSQDGKIKVW 290 (508)
T ss_pred ccccchhheeeCCCCceEeeccccceeeeehhccchhhhhhhhhhhcceeecccceEEEeecccHHHhhccCcCCcEEEE
Confidence 4456788999999999999999999999999999876421 1233467899999999999999999999 99999
Q ss_pred EcCCCceEEEEEecccCCCCCceeEEEEEEccCC-EEEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEE
Q psy12614 182 DIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADF-TIITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLY 260 (708)
Q Consensus 182 d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~ 260 (708)
.+++|.+++++...+ ...|+|+.|+.|+ ++++++.|.++++.-+++|++++.+.+|...|+...|++||..++
T Consensus 291 ri~tG~ClRrFdrAH------tkGvt~l~FSrD~SqiLS~sfD~tvRiHGlKSGK~LKEfrGHsSyvn~a~ft~dG~~ii 364 (508)
T KOG0275|consen 291 RIETGQCLRRFDRAH------TKGVTCLSFSRDNSQILSASFDQTVRIHGLKSGKCLKEFRGHSSYVNEATFTDDGHHII 364 (508)
T ss_pred EEecchHHHHhhhhh------ccCeeEEEEccCcchhhcccccceEEEeccccchhHHHhcCccccccceEEcCCCCeEE
Confidence 999999999987643 8889999999999 599999999999999999999999999999999999999999999
Q ss_pred EEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEe--ccccceEEEEEe---CCEEEEEcCCCeEEEEeCCCCcee
Q psy12614 261 CAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRV--IHEGDVKSLALH---GNRLYSGGLDSYLSLSYYPPKTLV 335 (708)
Q Consensus 261 ~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~--~~~~~v~~l~~~---~~~l~s~~~d~~i~iw~~~~~~~~ 335 (708)
+++.||+|++|+..+ ++ ...++. +..-+|.++..- ...++.+...+++.+.++.+...+
T Consensus 365 saSsDgtvkvW~~Kt--------te--------C~~Tfk~~~~d~~vnsv~~~PKnpeh~iVCNrsntv~imn~qGQvVr 428 (508)
T KOG0275|consen 365 SASSDGTVKVWHGKT--------TE--------CLSTFKPLGTDYPVNSVILLPKNPEHFIVCNRSNTVYIMNMQGQVVR 428 (508)
T ss_pred EecCCccEEEecCcc--------hh--------hhhhccCCCCcccceeEEEcCCCCceEEEEcCCCeEEEEeccceEEe
Confidence 999999999999988 33 222222 233456665544 778999999999999999998888
Q ss_pred ecCccCCC---CceEEEEcCCcEEEE-EcCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEe
Q psy12614 336 KYPCTLAQ---STPVSLAKDIQHVLL-QYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVV 411 (708)
Q Consensus 336 ~~~~~~~~---~~~~~~s~~~~~l~~-~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 411 (708)
.+...... --+..+||.|..+.+ +.|+.++-|...++. +.+...-|...+..++-
T Consensus 429 sfsSGkREgGdFi~~~lSpkGewiYcigED~vlYCF~~~sG~---------------------LE~tl~VhEkdvIGl~H 487 (508)
T KOG0275|consen 429 SFSSGKREGGDFINAILSPKGEWIYCIGEDGVLYCFSVLSGK---------------------LERTLPVHEKDVIGLTH 487 (508)
T ss_pred eeccCCccCCceEEEEecCCCcEEEEEccCcEEEEEEeecCc---------------------eeeeeeccccccccccc
Confidence 77632222 245788999999987 689999999988765 55666677788889999
Q ss_pred CCCCcEEEE-EcCCceEEEE
Q psy12614 412 SNDGKYVAY-STESCVRLHS 430 (708)
Q Consensus 412 s~~g~~l~~-~~d~~i~i~~ 430 (708)
+|....+|+ +.||.+++|.
T Consensus 488 HPHqNllAsYsEDgllKLWk 507 (508)
T KOG0275|consen 488 HPHQNLLASYSEDGLLKLWK 507 (508)
T ss_pred CcccchhhhhcccchhhhcC
Confidence 999999998 7799999994
|
|
| >KOG0277|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-28 Score=209.09 Aligned_cols=274 Identities=15% Similarity=0.241 Sum_probs=222.5
Q ss_pred EEEEcCC-CCEEEEE-------eCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe---CCEEEEEcCCCcEEEEECC
Q psy12614 31 CIACEPK-SSRLAVS-------RADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF---NDRLFSGGLQGFVNEYDMR 99 (708)
Q Consensus 31 ~~~~s~~-~~~la~~-------~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~---~~~l~s~~~d~~i~vwd~~ 99 (708)
++.|||- .++||++ ..+|++.|-++....-+. .+....-...+..++|+ .+.+++++.||++++||+.
T Consensus 13 svqfSPf~~nrLavAt~q~yGl~G~G~L~ile~~~~~gi~-e~~s~d~~D~LfdV~Wse~~e~~~~~a~GDGSLrl~d~~ 91 (311)
T KOG0277|consen 13 SVQFSPFVENRLAVATAQHYGLAGNGRLFILEVTDPKGIQ-ECQSYDTEDGLFDVAWSENHENQVIAASGDGSLRLFDLT 91 (311)
T ss_pred eeEecccccchhheeehhhcccccCceEEEEecCCCCCeE-EEEeeecccceeEeeecCCCcceEEEEecCceEEEeccC
Confidence 6788883 2344443 236899999996443332 22222223789999999 8899999999999999965
Q ss_pred C-CeEeEEEeecCCceEEEEEecC-CCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCC-CCEEEEecCC
Q psy12614 100 R-LNIKSSTAVTSGTCWCLSVHKK-KRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSS-GDYLVTGCAA 176 (708)
Q Consensus 100 ~-~~~~~~~~~~~~~v~~~~~s~~-~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d-~~~l~~~~~d 176 (708)
. ..+++.++.|...|.++.|++- +..+++++-|++|++|+...++-+ .++.+|...|...+|+|. .+.+++++.|
T Consensus 92 ~~s~Pi~~~kEH~~EV~Svdwn~~~r~~~ltsSWD~TiKLW~~~r~~Sv--~Tf~gh~~~Iy~a~~sp~~~nlfas~Sgd 169 (311)
T KOG0277|consen 92 MPSKPIHKFKEHKREVYSVDWNTVRRRIFLTSSWDGTIKLWDPNRPNSV--QTFNGHNSCIYQAAFSPHIPNLFASASGD 169 (311)
T ss_pred CCCcchhHHHhhhhheEEeccccccceeEEeeccCCceEeecCCCCcce--EeecCCccEEEEEecCCCCCCeEEEccCC
Confidence 4 4588999999999999999984 556777899999999999888776 789999999999999995 5788999999
Q ss_pred -eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCC--EEEEEcCCCcEEEEeCCCC-eeEEEeeccccCeEEEEE
Q psy12614 177 -AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADF--TIITGDSGGFVRFWDGKTG-VQWSDVKTHKKDILALTV 252 (708)
Q Consensus 177 -~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~l~~~~~dg~i~~wd~~~~-~~~~~~~~~~~~i~~~~~ 252 (708)
++++||++..-....+..+ ...+.++.|+.-. .+++|+.|+.|+.||++.- .++..+.+|.-.|..+.|
T Consensus 170 ~~l~lwdvr~~gk~~~i~ah-------~~Eil~cdw~ky~~~vl~Tg~vd~~vr~wDir~~r~pl~eL~gh~~AVRkvk~ 242 (311)
T KOG0277|consen 170 GTLRLWDVRSPGKFMSIEAH-------NSEILCCDWSKYNHNVLATGGVDNLVRGWDIRNLRTPLFELNGHGLAVRKVKF 242 (311)
T ss_pred ceEEEEEecCCCceeEEEec-------cceeEeecccccCCcEEEecCCCceEEEEehhhccccceeecCCceEEEEEec
Confidence 9999999865444445533 7889999999855 3889999999999999875 567888999999999999
Q ss_pred eCCC-CEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe---CCEEEEEcCCCeEEEEe
Q psy12614 253 SEDE-NYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH---GNRLYSGGLDSYLSLSY 328 (708)
Q Consensus 253 s~~~-~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~---~~~l~s~~~d~~i~iw~ 328 (708)
||-. ..|++++.|-+++|||... +. ........|+.-+..+.|+ +.++++.+.|+.+.||+
T Consensus 243 Sph~~~lLaSasYDmT~riw~~~~--------~d-------s~~e~~~~HtEFv~g~Dws~~~~~~vAs~gWDe~l~Vw~ 307 (311)
T KOG0277|consen 243 SPHHASLLASASYDMTVRIWDPER--------QD-------SAIETVDHHTEFVCGLDWSLFDPGQVASTGWDELLYVWN 307 (311)
T ss_pred CcchhhHhhhccccceEEeccccc--------ch-------hhhhhhhccceEEeccccccccCceeeecccccceeeec
Confidence 9965 6889999999999999986 22 1334556788889999998 89999999999999998
Q ss_pred C
Q psy12614 329 Y 329 (708)
Q Consensus 329 ~ 329 (708)
.
T Consensus 308 p 308 (311)
T KOG0277|consen 308 P 308 (311)
T ss_pred c
Confidence 4
|
|
| >KOG0640|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.6e-29 Score=215.71 Aligned_cols=291 Identities=18% Similarity=0.284 Sum_probs=239.6
Q ss_pred eeeeeccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCC-----------------CCeEEEEEecCCCCCcEEEEEE
Q psy12614 17 HNIKFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISE-----------------TPHVDRVFIGDPLSNSIECLTW 79 (708)
Q Consensus 17 ~~~~~~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~-----------------~~~~~~~~~~h~~~~~v~~l~~ 79 (708)
+.-..+..|.+++.+.+|||||.++|+|+.|-.|+|.|++. +..+.++|-.|. ..|+++.|
T Consensus 103 yEt~ylt~HK~~cR~aafs~DG~lvATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~--devn~l~F 180 (430)
T KOG0640|consen 103 YETKYLTSHKSPCRAAAFSPDGSLVATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHV--DEVNDLDF 180 (430)
T ss_pred cceEEEeecccceeeeeeCCCCcEEEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhcc--Ccccceee
Confidence 34456788999999999999999999999999999999971 123445888999 99999999
Q ss_pred e--CCEEEEEcCCCcEEEEECCCCeEeEEEe--ecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEE-Eecccc
Q psy12614 80 F--NDRLFSGGLQGFVNEYDMRRLNIKSSTA--VTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYE-KLLDRQ 154 (708)
Q Consensus 80 ~--~~~l~s~~~d~~i~vwd~~~~~~~~~~~--~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~-~~~~~~ 154 (708)
. ...|++++.|++|+++|+......+.++ ....+|.++.|+|.|.+|++|.+-..+++||+.+-++-.. ..-.+|
T Consensus 181 HPre~ILiS~srD~tvKlFDfsK~saKrA~K~~qd~~~vrsiSfHPsGefllvgTdHp~~rlYdv~T~QcfvsanPd~qh 260 (430)
T KOG0640|consen 181 HPRETILISGSRDNTVKLFDFSKTSAKRAFKVFQDTEPVRSISFHPSGEFLLVGTDHPTLRLYDVNTYQCFVSANPDDQH 260 (430)
T ss_pred cchhheEEeccCCCeEEEEecccHHHHHHHHHhhccceeeeEeecCCCceEEEecCCCceeEEeccceeEeeecCccccc
Confidence 9 8999999999999999998754333222 3346899999999999999999999999999998876422 223468
Q ss_pred cccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCC
Q psy12614 155 QGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGK 232 (708)
Q Consensus 155 ~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~ 232 (708)
.+.|+++.+++.+++.++++.| .|++||--+++++.++...+. ...|.+..|..+|+ +++.+.|..+++|.+.
T Consensus 261 t~ai~~V~Ys~t~~lYvTaSkDG~IklwDGVS~rCv~t~~~AH~-----gsevcSa~Ftkn~kyiLsSG~DS~vkLWEi~ 335 (430)
T KOG0640|consen 261 TGAITQVRYSSTGSLYVTASKDGAIKLWDGVSNRCVRTIGNAHG-----GSEVCSAVFTKNGKYILSSGKDSTVKLWEIS 335 (430)
T ss_pred ccceeEEEecCCccEEEEeccCCcEEeeccccHHHHHHHHhhcC-----CceeeeEEEccCCeEEeecCCcceeeeeeec
Confidence 8999999999999999999999 999999999999998877642 67799999999997 8899999999999999
Q ss_pred CCeeEEEeecc-----ccCeEEEEEeCCCCEEEEEec-CCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceE
Q psy12614 233 TGVQWSDVKTH-----KKDILALTVSEDENYLYCAGV-DPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVK 306 (708)
Q Consensus 233 ~~~~~~~~~~~-----~~~i~~~~~s~~~~~l~~~~~-dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~ 306 (708)
+++++..+.+- ..--+...|+....+++.-.+ .+.+.-||.++ +. .....-.+|++.++
T Consensus 336 t~R~l~~YtGAg~tgrq~~rtqAvFNhtEdyVl~pDEas~slcsWdaRt--------ad-------r~~l~slgHn~a~R 400 (430)
T KOG0640|consen 336 TGRMLKEYTGAGTTGRQKHRTQAVFNHTEDYVLFPDEASNSLCSWDART--------AD-------RVALLSLGHNGAVR 400 (430)
T ss_pred CCceEEEEecCCcccchhhhhhhhhcCccceEEccccccCceeeccccc--------hh-------hhhhcccCCCCCce
Confidence 99999888653 112234567777777766544 46889999998 43 01122358999999
Q ss_pred EEEEe--CCEEEEEcCCCeEEEEeC
Q psy12614 307 SLALH--GNRLYSGGLDSYLSLSYY 329 (708)
Q Consensus 307 ~l~~~--~~~l~s~~~d~~i~iw~~ 329 (708)
.+..+ +..+++++.|...++|--
T Consensus 401 ~i~HSP~~p~FmTcsdD~raRFWyr 425 (430)
T KOG0640|consen 401 WIVHSPVEPAFMTCSDDFRARFWYR 425 (430)
T ss_pred EEEeCCCCCceeeecccceeeeeee
Confidence 99988 889999999999999964
|
|
| >KOG0268|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-29 Score=224.59 Aligned_cols=275 Identities=13% Similarity=0.235 Sum_probs=233.4
Q ss_pred ccCCCCcEEEEEEcCCC-CEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEeCCEEEEEcCCCcEEEEECCC
Q psy12614 22 YAPEPKVINCIACEPKS-SRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWFNDRLFSGGLQGFVNEYDMRR 100 (708)
Q Consensus 22 ~~~h~~~v~~~~~s~~~-~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~~~~l~s~~~d~~i~vwd~~~ 100 (708)
+.||.+.|.|+|=+|.. ..+|+|+.||.|+|||+.+..+.. ++..|. +.|..|++....+++++.|.+|+.|.++.
T Consensus 62 L~gHrdGV~~lakhp~~ls~~aSGs~DG~VkiWnlsqR~~~~-~f~AH~--G~V~Gi~v~~~~~~tvgdDKtvK~wk~~~ 138 (433)
T KOG0268|consen 62 LDGHRDGVSCLAKHPNKLSTVASGSCDGEVKIWNLSQRECIR-TFKAHE--GLVRGICVTQTSFFTVGDDKTVKQWKIDG 138 (433)
T ss_pred ccccccccchhhcCcchhhhhhccccCceEEEEehhhhhhhh-eeeccc--CceeeEEecccceEEecCCcceeeeeccC
Confidence 68999999999999988 789999999999999999988776 999999 99999999988899999999999999877
Q ss_pred CeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCE-EEEecCC-eE
Q psy12614 101 LNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDY-LVTGCAA-AV 178 (708)
Q Consensus 101 ~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~-l~~~~~d-~i 178 (708)
.+++++.+. +.+..+.-+..+..+|+++. .|.|||......+ ..+.-....|.++.|+|-... |++++.| .|
T Consensus 139 -~p~~tilg~-s~~~gIdh~~~~~~FaTcGe--~i~IWD~~R~~Pv--~smswG~Dti~svkfNpvETsILas~~sDrsI 212 (433)
T KOG0268|consen 139 -PPLHTILGK-SVYLGIDHHRKNSVFATCGE--QIDIWDEQRDNPV--SSMSWGADSISSVKFNPVETSILASCASDRSI 212 (433)
T ss_pred -Ccceeeecc-ccccccccccccccccccCc--eeeecccccCCcc--ceeecCCCceeEEecCCCcchheeeeccCCce
Confidence 466666553 55777777777788888875 4899999877776 555555778999999998754 5566688 99
Q ss_pred EEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCC-EEEEEcCCCcEEEEeCCCC-eeEEEeeccccCeEEEEEeCCC
Q psy12614 179 RVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADF-TIITGDSGGFVRFWDGKTG-VQWSDVKTHKKDILALTVSEDE 256 (708)
Q Consensus 179 ~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~~~~~dg~i~~wd~~~~-~~~~~~~~~~~~i~~~~~s~~~ 256 (708)
.+||++++.++.++.. .-..+.++|+|++ .+++++.|..++.||++.. +++....+|.+.|..+.|||.|
T Consensus 213 vLyD~R~~~Pl~KVi~--------~mRTN~IswnPeafnF~~a~ED~nlY~~DmR~l~~p~~v~~dhvsAV~dVdfsptG 284 (433)
T KOG0268|consen 213 VLYDLRQASPLKKVIL--------TMRTNTICWNPEAFNFVAANEDHNLYTYDMRNLSRPLNVHKDHVSAVMDVDFSPTG 284 (433)
T ss_pred EEEecccCCccceeee--------eccccceecCccccceeeccccccceehhhhhhcccchhhcccceeEEEeccCCCc
Confidence 9999999999998876 3456789999977 4999999999999999875 4577888999999999999999
Q ss_pred CEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccc---cceEEEEEe--CCEEEEEcCCCeEEEEeCCC
Q psy12614 257 NYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHE---GDVKSLALH--GNRLYSGGLDSYLSLSYYPP 331 (708)
Q Consensus 257 ~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~---~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~ 331 (708)
+-+++|+.|.+|+||.... +. ..-..|+ ..|.++.|+ ..++++|+.|+.|++|....
T Consensus 285 ~EfvsgsyDksIRIf~~~~--------~~----------SRdiYhtkRMq~V~~Vk~S~Dskyi~SGSdd~nvRlWka~A 346 (433)
T KOG0268|consen 285 QEFVSGSYDKSIRIFPVNH--------GH----------SRDIYHTKRMQHVFCVKYSMDSKYIISGSDDGNVRLWKAKA 346 (433)
T ss_pred chhccccccceEEEeecCC--------Cc----------chhhhhHhhhheeeEEEEeccccEEEecCCCcceeeeecch
Confidence 9999999999999999988 53 1111232 458999999 89999999999999998754
|
|
| >KOG0647|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.6e-28 Score=210.20 Aligned_cols=269 Identities=16% Similarity=0.189 Sum_probs=217.9
Q ss_pred eccCCCCcEEEEEEcC-CCCEEEEEeCCCcEEEEeCCC-CCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEE
Q psy12614 21 FYAPEPKVINCIACEP-KSSRLAVSRADQSIEIWDISE-TPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEY 96 (708)
Q Consensus 21 ~~~~h~~~v~~~~~s~-~~~~la~~~~dg~v~iwd~~~-~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vw 96 (708)
+-....+.|.+++||| ...+++.|+-||+|++|+++. |..+.+....|. ++|.+++|+ |..+++|+.|+.+++|
T Consensus 22 v~~pP~DsIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~g~~~~ka~~~~~--~PvL~v~WsddgskVf~g~~Dk~~k~w 99 (347)
T KOG0647|consen 22 VPNPPEDSISALAFSPQADNLLAAGSWDGTVRIWEVQNSGQLVPKAQQSHD--GPVLDVCWSDDGSKVFSGGCDKQAKLW 99 (347)
T ss_pred cCCCcccchheeEeccccCceEEecccCCceEEEEEecCCcccchhhhccC--CCeEEEEEccCCceEEeeccCCceEEE
Confidence 3456779999999999 455667889999999999987 566556777788 999999999 9999999999999999
Q ss_pred ECCCCeEeEEEeecCCceEEEEEecCCC--EEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEec
Q psy12614 97 DMRRLNIKSSTAVTSGTCWCLSVHKKKR--LLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGC 174 (708)
Q Consensus 97 d~~~~~~~~~~~~~~~~v~~~~~s~~~~--~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~ 174 (708)
|+.++ +...+..|.++|.++.|-+... .|++|+.|.+|+.||.+....+....+ .+++.++..- ..+++.+.
T Consensus 100 DL~S~-Q~~~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~~pv~t~~L---PeRvYa~Dv~--~pm~vVat 173 (347)
T KOG0647|consen 100 DLASG-QVSQVAAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSSNPVATLQL---PERVYAADVL--YPMAVVAT 173 (347)
T ss_pred EccCC-CeeeeeecccceeEEEEecCCCcceeEecccccceeecccCCCCeeeeeec---cceeeehhcc--CceeEEEe
Confidence 99998 6778889999999999988766 899999999999999998887643444 4667766543 45778888
Q ss_pred CC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCC--eeEEEeecccc-----
Q psy12614 175 AA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTG--VQWSDVKTHKK----- 245 (708)
Q Consensus 175 ~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~--~~~~~~~~~~~----- 245 (708)
.+ .|.+|+++++....+.... .-...+.|++..+|.. .+.|+-+|.+.+..+..+ +.-.++++|..
T Consensus 174 a~r~i~vynL~n~~te~k~~~S-----pLk~Q~R~va~f~d~~~~alGsiEGrv~iq~id~~~~~~nFtFkCHR~~~~~~ 248 (347)
T KOG0647|consen 174 AERHIAVYNLENPPTEFKRIES-----PLKWQTRCVACFQDKDGFALGSIEGRVAIQYIDDPNPKDNFTFKCHRSTNSVN 248 (347)
T ss_pred cCCcEEEEEcCCCcchhhhhcC-----cccceeeEEEEEecCCceEeeeecceEEEEecCCCCccCceeEEEeccCCCCC
Confidence 88 9999999876554433222 2267789999888875 899999999999998876 44445666652
Q ss_pred ----CeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEEE
Q psy12614 246 ----DILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSG 318 (708)
Q Consensus 246 ----~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~ 318 (708)
.|.+++|.|....|++++.||++.+||-+. .. .+.....|..+|++.+|+ |.+++.+
T Consensus 249 ~~VYaVNsi~FhP~hgtlvTaGsDGtf~FWDkda--------r~--------kLk~s~~~~qpItcc~fn~~G~ifaYA 311 (347)
T KOG0647|consen 249 DDVYAVNSIAFHPVHGTLVTAGSDGTFSFWDKDA--------RT--------KLKTSETHPQPITCCSFNRNGSIFAYA 311 (347)
T ss_pred CceEEecceEeecccceEEEecCCceEEEecchh--------hh--------hhhccCcCCCccceeEecCCCCEEEEE
Confidence 578899999999999999999999999876 33 456667789999999998 6666544
|
|
| >KOG0289|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.5e-28 Score=219.91 Aligned_cols=279 Identities=18% Similarity=0.294 Sum_probs=246.2
Q ss_pred CcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECCCCeEe
Q psy12614 27 KVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMRRLNIK 104 (708)
Q Consensus 27 ~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~~~~ 104 (708)
..|+++...|....+.+|+.|..+.++|...++.+. +++||. ..|+.+.|+ ...+++++.|..|+||........
T Consensus 220 pgi~ald~~~s~~~ilTGG~d~~av~~d~~s~q~l~-~~~Gh~--kki~~v~~~~~~~~v~~aSad~~i~vws~~~~s~~ 296 (506)
T KOG0289|consen 220 PGITALDIIPSSSKILTGGEDKTAVLFDKPSNQILA-TLKGHT--KKITSVKFHKDLDTVITASADEIIRVWSVPLSSEP 296 (506)
T ss_pred CCeeEEeecCCCCcceecCCCCceEEEecchhhhhh-hccCcc--eEEEEEEeccchhheeecCCcceEEeeccccccCc
Confidence 568899999888889999999999999999998887 999999 999999999 778899999999999999998888
Q ss_pred EEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEc
Q psy12614 105 SSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDI 183 (708)
Q Consensus 105 ~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~ 183 (708)
.....|.++|+.+..+|.|.||++++.|+...+.|++++.......-....-.+++.+|+|||..+.+|..| .+++||+
T Consensus 297 ~~~~~h~~~V~~ls~h~tgeYllsAs~d~~w~Fsd~~~g~~lt~vs~~~s~v~~ts~~fHpDgLifgtgt~d~~vkiwdl 376 (506)
T KOG0289|consen 297 TSSRPHEEPVTGLSLHPTGEYLLSASNDGTWAFSDISSGSQLTVVSDETSDVEYTSAAFHPDGLIFGTGTPDGVVKIWDL 376 (506)
T ss_pred cccccccccceeeeeccCCcEEEEecCCceEEEEEccCCcEEEEEeeccccceeEEeeEcCCceEEeccCCCceEEEEEc
Confidence 889999999999999999999999999999999999999887444433344568999999999999999999 9999999
Q ss_pred CCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCeeEEEeecc-ccCeEEEEEeCCCCEEEE
Q psy12614 184 HKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDVKTH-KKDILALTVSEDENYLYC 261 (708)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~~~~-~~~i~~~~~s~~~~~l~~ 261 (708)
.++.....+. +|.++|..++|+.+|. ++++..|+.|++||++..+...++... ...+.++.|.+.|.+|+.
T Consensus 377 ks~~~~a~Fp-------ght~~vk~i~FsENGY~Lat~add~~V~lwDLRKl~n~kt~~l~~~~~v~s~~fD~SGt~L~~ 449 (506)
T KOG0289|consen 377 KSQTNVAKFP-------GHTGPVKAISFSENGYWLATAADDGSVKLWDLRKLKNFKTIQLDEKKEVNSLSFDQSGTYLGI 449 (506)
T ss_pred CCccccccCC-------CCCCceeEEEeccCceEEEEEecCCeEEEEEehhhcccceeeccccccceeEEEcCCCCeEEe
Confidence 9998877776 4599999999999996 899999999999999988777776532 347999999999999999
Q ss_pred EecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEEEcCCCeEEEEeC
Q psy12614 262 AGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSGGLDSYLSLSYY 329 (708)
Q Consensus 262 ~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~~~d~~i~iw~~ 329 (708)
++.|=.|++++-.+ ..|.....+..|.+..+.+.|. ..++++++.|..++++.+
T Consensus 450 ~g~~l~Vy~~~k~~--------------k~W~~~~~~~~~sg~st~v~Fg~~aq~l~s~smd~~l~~~a~ 505 (506)
T KOG0289|consen 450 AGSDLQVYICKKKT--------------KSWTEIKELADHSGLSTGVRFGEHAQYLASTSMDAILRLYAL 505 (506)
T ss_pred ecceeEEEEEeccc--------------ccceeeehhhhcccccceeeecccceEEeeccchhheEEeec
Confidence 98776666665544 5788999999999999999998 889999999999988764
|
|
| >KOG0641|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.7e-26 Score=192.28 Aligned_cols=291 Identities=16% Similarity=0.191 Sum_probs=235.0
Q ss_pred cCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCC------C--------CeEEEEEecCCCCCcEEEEEEe--CCEEEE
Q psy12614 23 APEPKVINCIACEPKSSRLAVSRADQSIEIWDISE------T--------PHVDRVFIGDPLSNSIECLTWF--NDRLFS 86 (708)
Q Consensus 23 ~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~------~--------~~~~~~~~~h~~~~~v~~l~~~--~~~l~s 86 (708)
..-+..|.+++|+|.|.+-|+|+...+.+|..... + ..+.+.-.-|+ +.|.|.+|+ |..|++
T Consensus 29 l~dsqairav~fhp~g~lyavgsnskt~ric~yp~l~~~r~~hea~~~pp~v~~kr~khhk--gsiyc~~ws~~geliat 106 (350)
T KOG0641|consen 29 LEDSQAIRAVAFHPAGGLYAVGSNSKTFRICAYPALIDLRHAHEAAKQPPSVLCKRNKHHK--GSIYCTAWSPCGELIAT 106 (350)
T ss_pred ecchhheeeEEecCCCceEEeccCCceEEEEccccccCcccccccccCCCeEEeeeccccC--ccEEEEEecCccCeEEe
Confidence 34567899999999999999999999999875532 1 11222333455 999999999 999999
Q ss_pred EcCCCcEEEEECCCCe-----EeEEEeecCCceEEEEEecC----CCEEEEEeC-CCcEEEEEccCCcEEEEEecccccc
Q psy12614 87 GGLQGFVNEYDMRRLN-----IKSSTAVTSGTCWCLSVHKK----KRLLAAGTE-QGHINLFQISDEGLLYEKLLDRQQG 156 (708)
Q Consensus 87 ~~~d~~i~vwd~~~~~-----~~~~~~~~~~~v~~~~~s~~----~~~la~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~ 156 (708)
|+.|.+|++..++... .-..+.-|.+.|..++|-.+ +..|++++. |..|++-|...|+.. ..+.+|.+
T Consensus 107 gsndk~ik~l~fn~dt~~~~g~dle~nmhdgtirdl~fld~~~s~~~il~s~gagdc~iy~tdc~~g~~~--~a~sghtg 184 (350)
T KOG0641|consen 107 GSNDKTIKVLPFNADTCNATGHDLEFNMHDGTIRDLAFLDDPESGGAILASAGAGDCKIYITDCGRGQGF--HALSGHTG 184 (350)
T ss_pred cCCCceEEEEecccccccccCcceeeeecCCceeeeEEecCCCcCceEEEecCCCcceEEEeecCCCCcc--eeecCCcc
Confidence 9999999998765533 23457789999999999764 457777654 777888888888776 78999999
Q ss_pred cEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCC
Q psy12614 157 RILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTG 234 (708)
Q Consensus 157 ~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~ 234 (708)
.|.++- +-++-++++|+.| +|++||++-..++..+.....+.--....|.+++..|.|+ +++|..|....+||++.+
T Consensus 185 hilaly-swn~~m~~sgsqdktirfwdlrv~~~v~~l~~~~~~~glessavaav~vdpsgrll~sg~~dssc~lydirg~ 263 (350)
T KOG0641|consen 185 HILALY-SWNGAMFASGSQDKTIRFWDLRVNSCVNTLDNDFHDGGLESSAVAAVAVDPSGRLLASGHADSSCMLYDIRGG 263 (350)
T ss_pred cEEEEE-EecCcEEEccCCCceEEEEeeeccceeeeccCcccCCCcccceeEEEEECCCcceeeeccCCCceEEEEeeCC
Confidence 998873 4468899999999 9999999988888877644211101246799999999997 788889999999999999
Q ss_pred eeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--C
Q psy12614 235 VQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--G 312 (708)
Q Consensus 235 ~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~ 312 (708)
+.++.+..|...|.++.|+|...++++++.|..|++-|++. . -..-.+......|...+..+.|+ .
T Consensus 264 r~iq~f~phsadir~vrfsp~a~yllt~syd~~ikltdlqg--------d----la~el~~~vv~ehkdk~i~~rwh~~d 331 (350)
T KOG0641|consen 264 RMIQRFHPHSADIRCVRFSPGAHYLLTCSYDMKIKLTDLQG--------D----LAHELPIMVVAEHKDKAIQCRWHPQD 331 (350)
T ss_pred ceeeeeCCCccceeEEEeCCCceEEEEecccceEEEeeccc--------c----hhhcCceEEEEeccCceEEEEecCcc
Confidence 99999999999999999999999999999999999999986 1 11122455667888999999999 5
Q ss_pred CEEEEEcCCCeEEEEeCC
Q psy12614 313 NRLYSGGLDSYLSLSYYP 330 (708)
Q Consensus 313 ~~l~s~~~d~~i~iw~~~ 330 (708)
-.+++.+.|.++.+|.+.
T Consensus 332 ~sfisssadkt~tlwa~~ 349 (350)
T KOG0641|consen 332 FSFISSSADKTATLWALN 349 (350)
T ss_pred ceeeeccCcceEEEeccC
Confidence 678899999999999764
|
|
| >KOG2096|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.1e-28 Score=210.89 Aligned_cols=309 Identities=14% Similarity=0.175 Sum_probs=230.2
Q ss_pred EEEEECCCCeE-----eEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecc--cccccEEEEEECC
Q psy12614 93 VNEYDMRRLNI-----KSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLD--RQQGRILCTAWHS 165 (708)
Q Consensus 93 i~vwd~~~~~~-----~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~--~~~~~v~~~~~s~ 165 (708)
+.-|+.+..+. +..+++|.+.|++++|+.||++||+++.|+.|++|+++.-.....+.+. -.-+..+.+.|+|
T Consensus 63 ~~~~k~~q~~f~Hpl~~~~LKgH~~~vt~~~FsSdGK~lat~~~Dr~Ir~w~~~DF~~~eHr~~R~nve~dhpT~V~Fap 142 (420)
T KOG2096|consen 63 NDQWKAKQPTFVHPLNVSVLKGHKKEVTDVAFSSDGKKLATISGDRSIRLWDVRDFENKEHRCIRQNVEYDHPTRVVFAP 142 (420)
T ss_pred hhhhcccCCCcccchhhhhhhccCCceeeeEEcCCCceeEEEeCCceEEEEecchhhhhhhhHhhccccCCCceEEEECC
Confidence 34455444332 3457799999999999999999999999999999999864321111111 1123467899999
Q ss_pred CCCEEEEecC-C-eEEEEEcCCC---ceEEEEEecccCCC--CCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCeeE
Q psy12614 166 SGDYLVTGCA-A-AVRVWDIHKG---HAIHKMSLDKSSKF--SKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQW 237 (708)
Q Consensus 166 d~~~l~~~~~-d-~i~iwd~~~~---~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~ 237 (708)
|.+-++.... + .+++|.+... ............+| .|...+..+-...++. +++++.|..|.+|+++ |+.+
T Consensus 143 Dc~s~vv~~~~g~~l~vyk~~K~~dG~~~~~~v~~D~~~f~~kh~v~~i~iGiA~~~k~imsas~dt~i~lw~lk-Gq~L 221 (420)
T KOG2096|consen 143 DCKSVVVSVKRGNKLCVYKLVKKTDGSGSHHFVHIDNLEFERKHQVDIINIGIAGNAKYIMSASLDTKICLWDLK-GQLL 221 (420)
T ss_pred CcceEEEEEccCCEEEEEEeeecccCCCCcccccccccccchhcccceEEEeecCCceEEEEecCCCcEEEEecC-Ccee
Confidence 9987765544 4 9999987532 21111110000001 2355566666665665 8899999999999998 9999
Q ss_pred EEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEE
Q psy12614 238 SDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRL 315 (708)
Q Consensus 238 ~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l 315 (708)
..+......-...+.||+|+++++++..-.+++|..-- +++...........+.+|...|.+++|+ ...+
T Consensus 222 ~~idtnq~~n~~aavSP~GRFia~~gFTpDVkVwE~~f--------~kdG~fqev~rvf~LkGH~saV~~~aFsn~S~r~ 293 (420)
T KOG2096|consen 222 QSIDTNQSSNYDAAVSPDGRFIAVSGFTPDVKVWEPIF--------TKDGTFQEVKRVFSLKGHQSAVLAAAFSNSSTRA 293 (420)
T ss_pred eeeccccccccceeeCCCCcEEEEecCCCCceEEEEEe--------ccCcchhhhhhhheeccchhheeeeeeCCCccee
Confidence 99887777778899999999999999999999999865 3333334444667899999999999999 8899
Q ss_pred EEEcCCCeEEEEeCCCCc--------eeecCcc----CCCCceEEEEcCCcEEEEEcCCeEEEEEecCCCCCCCCCCCCC
Q psy12614 316 YSGGLDSYLSLSYYPPKT--------LVKYPCT----LAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNT 383 (708)
Q Consensus 316 ~s~~~d~~i~iw~~~~~~--------~~~~~~~----~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~~ 383 (708)
++.+.||.+++||.+-.- ++..+.+ ...+-.++++|+|+.++.+....+++|..++++
T Consensus 294 vtvSkDG~wriwdtdVrY~~~qDpk~Lk~g~~pl~aag~~p~RL~lsP~g~~lA~s~gs~l~~~~se~g~---------- 363 (420)
T KOG2096|consen 294 VTVSKDGKWRIWDTDVRYEAGQDPKILKEGSAPLHAAGSEPVRLELSPSGDSLAVSFGSDLKVFASEDGK---------- 363 (420)
T ss_pred EEEecCCcEEEeeccceEecCCCchHhhcCCcchhhcCCCceEEEeCCCCcEEEeecCCceEEEEcccCc----------
Confidence 999999999999986432 2222211 223346899999999999999999999998877
Q ss_pred CcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEEEcCCceEEEE
Q psy12614 384 TGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYSTESCVRLHS 430 (708)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~d~~i~i~~ 430 (708)
..-.+...|...|.+++|+++|+++++..|..++++.
T Consensus 364 ----------~~~~~e~~h~~~Is~is~~~~g~~~atcGdr~vrv~~ 400 (420)
T KOG2096|consen 364 ----------DYPELEDIHSTTISSISYSSDGKYIATCGDRYVRVIR 400 (420)
T ss_pred ----------cchhHHHhhcCceeeEEecCCCcEEeeecceeeeeec
Confidence 4555566788999999999999999999999999876
|
|
| >KOG0299|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-27 Score=220.52 Aligned_cols=284 Identities=19% Similarity=0.241 Sum_probs=235.4
Q ss_pred eeeccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEE-----------------ecCCCCCcEEEEEEe-
Q psy12614 19 IKFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVF-----------------IGDPLSNSIECLTWF- 80 (708)
Q Consensus 19 ~~~~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~-----------------~~h~~~~~v~~l~~~- 80 (708)
.+.+..|.-+|+|++++||.+++.+++.+|+|.-|++.+++.....+ .+|. ..|.+++.+
T Consensus 135 ~~~~~~H~~s~~~vals~d~~~~fsask~g~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~k~~r~~h~--keil~~avS~ 212 (479)
T KOG0299|consen 135 FRVIGKHQLSVTSVALSPDDKRVFSASKDGTILKWDVLTGKKDRYIIERDEVLKSHGNPLKESRKGHV--KEILTLAVSS 212 (479)
T ss_pred ceeeccccCcceEEEeeccccceeecCCCcceeeeehhcCcccccccccchhhhhccCCCCccccccc--ceeEEEEEcC
Confidence 56788999999999999999999999999999999999876431111 2666 889999999
Q ss_pred -CCEEEEEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEE
Q psy12614 81 -NDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRIL 159 (708)
Q Consensus 81 -~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~ 159 (708)
+++|++|+.|..|.||+.++++.++.+.+|.+.|.+++|-.....|++++.|+.|++|+++....+ .++.+|++.|.
T Consensus 213 Dgkylatgg~d~~v~Iw~~~t~ehv~~~~ghr~~V~~L~fr~gt~~lys~s~Drsvkvw~~~~~s~v--etlyGHqd~v~ 290 (479)
T KOG0299|consen 213 DGKYLATGGRDRHVQIWDCDTLEHVKVFKGHRGAVSSLAFRKGTSELYSASADRSVKVWSIDQLSYV--ETLYGHQDGVL 290 (479)
T ss_pred CCcEEEecCCCceEEEecCcccchhhcccccccceeeeeeecCccceeeeecCCceEEEehhHhHHH--HHHhCCcccee
Confidence 999999999999999999999999999999999999999998889999999999999999988776 78999999999
Q ss_pred EEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEEEEcCCCcEEEEeCCCCeeEE
Q psy12614 160 CTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQWS 238 (708)
Q Consensus 160 ~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~ 238 (708)
.+.-..-++.+-+|+.| ++++|++.....+. .. ++...+-|++|..+..+++|+.+|.|.+|++...+++.
T Consensus 291 ~IdaL~reR~vtVGgrDrT~rlwKi~eesqli--fr------g~~~sidcv~~In~~HfvsGSdnG~IaLWs~~KKkplf 362 (479)
T KOG0299|consen 291 GIDALSRERCVTVGGRDRTVRLWKIPEESQLI--FR------GGEGSIDCVAFINDEHFVSGSDNGSIALWSLLKKKPLF 362 (479)
T ss_pred eechhcccceEEeccccceeEEEeccccceee--ee------CCCCCeeeEEEecccceeeccCCceEEEeeecccCcee
Confidence 99998888877778899 99999995443332 22 33778999999999999999999999999998888776
Q ss_pred Eee-c-----------cccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceE
Q psy12614 239 DVK-T-----------HKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVK 306 (708)
Q Consensus 239 ~~~-~-----------~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~ 306 (708)
+.. . ++..|++++..|...++++|+.+|.|++|.+.. |- .+..++..+. -.+-|+
T Consensus 363 ~~~~AHgv~~~~~~~~~~~Witsla~i~~sdL~asGS~~G~vrLW~i~~--------g~----r~i~~l~~ls-~~GfVN 429 (479)
T KOG0299|consen 363 TSRLAHGVIPELDPVNGNFWITSLAVIPGSDLLASGSWSGCVRLWKIED--------GL----RAINLLYSLS-LVGFVN 429 (479)
T ss_pred EeeccccccCCccccccccceeeeEecccCceEEecCCCCceEEEEecC--------Cc----cccceeeecc-cccEEE
Confidence 542 1 223899999999999999999999999999988 42 2232334443 567899
Q ss_pred EEEEe--CCEEEEE-cCCCeEEEE
Q psy12614 307 SLALH--GNRLYSG-GLDSYLSLS 327 (708)
Q Consensus 307 ~l~~~--~~~l~s~-~~d~~i~iw 327 (708)
+++|+ |..+++| +....+--|
T Consensus 430 sl~f~~sgk~ivagiGkEhRlGRW 453 (479)
T KOG0299|consen 430 SLAFSNSGKRIVAGIGKEHRLGRW 453 (479)
T ss_pred EEEEccCCCEEEEeccccccccee
Confidence 99988 6645444 444444444
|
|
| >KOG0308|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-28 Score=236.37 Aligned_cols=339 Identities=16% Similarity=0.253 Sum_probs=256.0
Q ss_pred CCEEEEEcCCCcEEEEECCCCe------EeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccc
Q psy12614 81 NDRLFSGGLQGFVNEYDMRRLN------IKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQ 154 (708)
Q Consensus 81 ~~~l~s~~~d~~i~vwd~~~~~------~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~ 154 (708)
+++|++||.||.|++|++..-. ....++.|...|..++...+++.|++++.|-+|++|+...+......++..|
T Consensus 37 ~ryLfTgGRDg~i~~W~~~~d~~~~s~~~~asme~HsDWVNDiiL~~~~~tlIS~SsDtTVK~W~~~~~~~~c~stir~H 116 (735)
T KOG0308|consen 37 GRYLFTGGRDGIIRLWSVTQDSNEPSTPYIASMEHHSDWVNDIILCGNGKTLISASSDTTVKVWNAHKDNTFCMSTIRTH 116 (735)
T ss_pred CceEEecCCCceEEEeccccccCCcccchhhhhhhhHhHHhhHHhhcCCCceEEecCCceEEEeecccCcchhHhhhhcc
Confidence 6789999999999999976532 3677889999999999999999999999999999999987753333788999
Q ss_pred cccEEEEEE-CCCCCEEEEecCC-eEEEEEcCCCce--EEEEEecc---cCCCCCceeEEEEEEccCCE-EEEEcCCCcE
Q psy12614 155 QGRILCTAW-HSSGDYLVTGCAA-AVRVWDIHKGHA--IHKMSLDK---SSKFSKNTAVWCVAFCADFT-IITGDSGGFV 226 (708)
Q Consensus 155 ~~~v~~~~~-s~d~~~l~~~~~d-~i~iwd~~~~~~--~~~~~~~~---~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i 226 (708)
...|.|+++ .++...+|+|+-| .|.+||++++.. +..+.... ... ++...|++++.++.|. +++|+..+.+
T Consensus 117 ~DYVkcla~~ak~~~lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~~sl~s-G~k~siYSLA~N~t~t~ivsGgtek~l 195 (735)
T KOG0308|consen 117 KDYVKCLAYIAKNNELVASGGLDRKIFLWDINTGTATLVASFNNVTVNSLGS-GPKDSIYSLAMNQTGTIIVSGGTEKDL 195 (735)
T ss_pred cchheeeeecccCceeEEecCCCccEEEEEccCcchhhhhhccccccccCCC-CCccceeeeecCCcceEEEecCcccce
Confidence 999999999 8889999999999 999999998833 32222111 111 4478899999999996 8899999999
Q ss_pred EEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceE
Q psy12614 227 RFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVK 306 (708)
Q Consensus 227 ~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~ 306 (708)
++||.++++.+..+.+|...|..+..++||+.+++++.||+|++||+.. .. .+.++..|...|+
T Consensus 196 r~wDprt~~kimkLrGHTdNVr~ll~~dDGt~~ls~sSDgtIrlWdLgq--------Qr--------Cl~T~~vH~e~VW 259 (735)
T KOG0308|consen 196 RLWDPRTCKKIMKLRGHTDNVRVLLVNDDGTRLLSASSDGTIRLWDLGQ--------QR--------CLATYIVHKEGVW 259 (735)
T ss_pred EEeccccccceeeeeccccceEEEEEcCCCCeEeecCCCceEEeeeccc--------cc--------eeeeEEeccCceE
Confidence 9999999999999999999999999999999999999999999999987 33 5677889999999
Q ss_pred EEEEe--CCEEEEEcCCCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEEEcCCeEEEEEecCCCCCCCCCCCCCC
Q psy12614 307 SLALH--GNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTT 384 (708)
Q Consensus 307 ~l~~~--~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~~~ 384 (708)
++..+ =..+++|+.||.|..=|+.+...
T Consensus 260 aL~~~~sf~~vYsG~rd~~i~~Tdl~n~~~-------------------------------------------------- 289 (735)
T KOG0308|consen 260 ALQSSPSFTHVYSGGRDGNIYRTDLRNPAK-------------------------------------------------- 289 (735)
T ss_pred EEeeCCCcceEEecCCCCcEEecccCCchh--------------------------------------------------
Confidence 99988 57899999999998877754310
Q ss_pred cccCCCCceEEEEEEecCCCceEEEEeCCCCcE-EEEEcCCceEEEEEEecCCcceeEEeecCCcccccceeEEEEEecC
Q psy12614 385 GVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKY-VAYSTESCVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVLISAD 463 (708)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~-l~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~d 463 (708)
. ........+|..+..+.+..- -++..|+.|+-|.... . ..+++.
T Consensus 290 ----------~-tlick~daPv~~l~~~~~~~~~WvtTtds~I~rW~~~~---~--------------------~~l~~s 335 (735)
T KOG0308|consen 290 ----------S-TLICKEDAPVLKLHLHEHDNSVWVTTTDSSIKRWKLEP---D--------------------IALSVS 335 (735)
T ss_pred ----------h-eEeecCCCchhhhhhccccCCceeeeccccceecCCcc---c--------------------cccccC
Confidence 0 111123345555555533222 3334577888886653 0 234444
Q ss_pred CCeEEEEecCCc-EEEecCCCeEEEEEecCCCCCccCcceEEEEECCCCcEEEEEecCCeEEEEECC
Q psy12614 464 STLLLAVSLNGP-LYIIDLSSLEIKYCVDPYKSNLMSDVISLVQMSECKQYIVCADRKSHVVIWKNG 529 (708)
Q Consensus 464 ~~~l~~~~~dg~-i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~ 529 (708)
+.+....+..+. ++..... +. ..+. | ...|..-++-.|.+++++-+..|.+.+||+-
T Consensus 336 ~~~~~~~T~~~~~~~~~~~t-p~--~vi~---G---g~ai~k~~mL~dkRhVlTkDa~gnv~lwDIl 393 (735)
T KOG0308|consen 336 GDLDFFSTDSNNHSCDLTNT-PD--SVIP---G---GAAIKKHAMLNDKRHVLTKDAKGNVALWDIL 393 (735)
T ss_pred CCCCcccccCCCccccccCC-Cc--eecc---C---chhhhhhhhhcCcceEeeecCCCCEEEEEee
Confidence 444442322222 3333211 00 1111 1 3366666777799999999999999999997
|
|
| >KOG1446|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.1e-26 Score=202.62 Aligned_cols=284 Identities=14% Similarity=0.197 Sum_probs=223.8
Q ss_pred ceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEec--CCeEEEEEccCCccc
Q psy12614 203 NTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGV--DPTVVCFQRTRKPQV 279 (708)
Q Consensus 203 ~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~--dg~i~iw~~~~~~~~ 279 (708)
...|.++.|+++|. +++++.|..+++||..+++.+.++..+.-.+..++|....+.++.++. |.+|+..++.+
T Consensus 14 ~~~i~sl~fs~~G~~litss~dDsl~LYd~~~g~~~~ti~skkyG~~~~~Fth~~~~~i~sStk~d~tIryLsl~d---- 89 (311)
T KOG1446|consen 14 NGKINSLDFSDDGLLLITSSEDDSLRLYDSLSGKQVKTINSKKYGVDLACFTHHSNTVIHSSTKEDDTIRYLSLHD---- 89 (311)
T ss_pred CCceeEEEecCCCCEEEEecCCCeEEEEEcCCCceeeEeecccccccEEEEecCCceEEEccCCCCCceEEEEeec----
Confidence 67899999999996 778889999999999999999999998889999999888888887776 88999999998
Q ss_pred ccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEEEcCCCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEE
Q psy12614 280 CSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVL 357 (708)
Q Consensus 280 ~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~ 357 (708)
.+ .++.+.||...|.+|+.+ ++.+++++.|++|++||++......+.
T Consensus 90 ----Nk--------ylRYF~GH~~~V~sL~~sP~~d~FlS~S~D~tvrLWDlR~~~cqg~l------------------- 138 (311)
T KOG1446|consen 90 ----NK--------YLRYFPGHKKRVNSLSVSPKDDTFLSSSLDKTVRLWDLRVKKCQGLL------------------- 138 (311)
T ss_pred ----Cc--------eEEEcCCCCceEEEEEecCCCCeEEecccCCeEEeeEecCCCCceEE-------------------
Confidence 66 789999999999999999 999999999999999999754322222
Q ss_pred EEcCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEEEc-CCceEEEEEEecCC
Q psy12614 358 LQYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYST-ESCVRLHSLDLDGD 436 (708)
Q Consensus 358 ~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~-d~~i~i~~~~~~~~ 436 (708)
. ...-..+||.|+|-++|++. .+.|++||+..-+.
T Consensus 139 ---------------------------------------~-----~~~~pi~AfDp~GLifA~~~~~~~IkLyD~Rs~dk 174 (311)
T KOG1446|consen 139 ---------------------------------------N-----LSGRPIAAFDPEGLIFALANGSELIKLYDLRSFDK 174 (311)
T ss_pred ---------------------------------------e-----cCCCcceeECCCCcEEEEecCCCeEEEEEecccCC
Confidence 0 11123568889998888876 44899999886432
Q ss_pred cceeEEeecCC-cccccceeEEEEEecCCCeEEEEecCCcEEEecCCCeEEEEEecCCCCCccCcceEEEEECCCCcEEE
Q psy12614 437 KPQISRIKNLP-APLFKSIFTHVLISADSTLLLAVSLNGPLYIIDLSSLEIKYCVDPYKSNLMSDVISLVQMSECKQYIV 515 (708)
Q Consensus 437 ~~~~~~~~~~~-~~~~~~~i~~~~~s~d~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~ 515 (708)
. .+..+. +. +. ....+.+.|||||++++..+..+.++.++.-++..+..+...+.. ..--...+|+||+++++
T Consensus 175 g-PF~tf~-i~~~~--~~ew~~l~FS~dGK~iLlsT~~s~~~~lDAf~G~~~~tfs~~~~~--~~~~~~a~ftPds~Fvl 248 (311)
T KOG1446|consen 175 G-PFTTFS-ITDND--EAEWTDLEFSPDGKSILLSTNASFIYLLDAFDGTVKSTFSGYPNA--GNLPLSATFTPDSKFVL 248 (311)
T ss_pred C-CceeEc-cCCCC--ccceeeeEEcCCCCEEEEEeCCCcEEEEEccCCcEeeeEeeccCC--CCcceeEEECCCCcEEE
Confidence 2 222221 22 11 335677999999999999988888777777777788888765543 32336788999999999
Q ss_pred EEecCCeEEEEECCceee--ecCC-CCCCceEEEEcCCCCEEEEEecCCcEEEEEcCCCCC
Q psy12614 516 CADRKSHVVIWKNGQHHA--SLPR-YRKPSTAMAIHPTLSTLVTVYSDHRIVEFDLNRKAF 573 (708)
Q Consensus 516 ~~~~d~~i~iw~~~~~~~--~~~~-~~~~v~~l~~s~d~~~l~~~~~dg~i~vwd~~~~~~ 573 (708)
+|+.||+|.+|+++++.. .+.+ +..++.++.|+|.-.++++++ ..+.+|-....+.
T Consensus 249 ~gs~dg~i~vw~~~tg~~v~~~~~~~~~~~~~~~fnP~~~mf~sa~--s~l~fw~p~~~~~ 307 (311)
T KOG1446|consen 249 SGSDDGTIHVWNLETGKKVAVLRGPNGGPVSCVRFNPRYAMFVSAS--SNLVFWLPDEDAL 307 (311)
T ss_pred EecCCCcEEEEEcCCCcEeeEecCCCCCCccccccCCceeeeeecC--ceEEEEecccccc
Confidence 999999999999994433 5555 789999999999777666554 5688887665543
|
|
| >PTZ00421 coronin; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1e-26 Score=235.21 Aligned_cols=280 Identities=13% Similarity=0.171 Sum_probs=207.1
Q ss_pred CcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeE----------E--EEEecCCCCCcEEEEEEe---CCEEEEEcCCC
Q psy12614 27 KVINCIACEPKSSRLAVSRADQSIEIWDISETPHV----------D--RVFIGDPLSNSIECLTWF---NDRLFSGGLQG 91 (708)
Q Consensus 27 ~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~----------~--~~~~~h~~~~~v~~l~~~---~~~l~s~~~d~ 91 (708)
..|.....++|+..+++++.+.....|+...+..+ . ..+.||. +.|.+++|+ +++|++++.|+
T Consensus 21 ~~i~~~~~~~d~~~~~~~n~~~~a~~w~~~gg~~v~~~~~~G~~~~~~~~l~GH~--~~V~~v~fsP~d~~~LaSgS~Dg 98 (493)
T PTZ00421 21 LNVTPSTALWDCSNTIACNDRFIAVPWQQLGSTAVLKHTDYGKLASNPPILLGQE--GPIIDVAFNPFDPQKLFTASEDG 98 (493)
T ss_pred eccccccccCCCCCcEeECCceEEEEEecCCceEEeeccccccCCCCCceEeCCC--CCEEEEEEcCCCCCEEEEEeCCC
Confidence 45666667777666666666666666665443211 1 2578999 999999998 67999999999
Q ss_pred cEEEEECCCC-------eEeEEEeecCCceEEEEEecCC-CEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEE
Q psy12614 92 FVNEYDMRRL-------NIKSSTAVTSGTCWCLSVHKKK-RLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAW 163 (708)
Q Consensus 92 ~i~vwd~~~~-------~~~~~~~~~~~~v~~~~~s~~~-~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~ 163 (708)
+|++||+.++ .++..+.+|...|.+++|+|++ ++|++++.|+.|++||+.+++.. ..+.+|...|.+++|
T Consensus 99 tIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~DgtVrIWDl~tg~~~--~~l~~h~~~V~sla~ 176 (493)
T PTZ00421 99 TIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMVVNVWDVERGKAV--EVIKCHSDQITSLEW 176 (493)
T ss_pred EEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCEEEEEECCCCeEE--EEEcCCCCceEEEEE
Confidence 9999999765 3567888999999999999985 68999999999999999998876 678889999999999
Q ss_pred CCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCC-EEEEEc----CCCcEEEEeCCCCe-e
Q psy12614 164 HSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADF-TIITGD----SGGFVRFWDGKTGV-Q 236 (708)
Q Consensus 164 s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~~~~----~dg~i~~wd~~~~~-~ 236 (708)
+|+|.+|++++.| .|++||+++++.+..+..+. ......+.|.+++ .+++++ .|+.|++||+++.. .
T Consensus 177 spdG~lLatgs~Dg~IrIwD~rsg~~v~tl~~H~------~~~~~~~~w~~~~~~ivt~G~s~s~Dr~VklWDlr~~~~p 250 (493)
T PTZ00421 177 NLDGSLLCTTSKDKKLNIIDPRDGTIVSSVEAHA------SAKSQRCLWAKRKDLIITLGCSKSQQRQIMLWDTRKMASP 250 (493)
T ss_pred ECCCCEEEEecCCCEEEEEECCCCcEEEEEecCC------CCcceEEEEcCCCCeEEEEecCCCCCCeEEEEeCCCCCCc
Confidence 9999999999999 99999999999887775431 2234566788876 455543 47899999998754 3
Q ss_pred EEEeecc-ccCeEEEEEeCCCCEEEEEec-CCeEEEEEccCCcccccCCCCCCCCcceEEeEEEe-ccccceEEEEEeCC
Q psy12614 237 WSDVKTH-KKDILALTVSEDENYLYCAGV-DPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRV-IHEGDVKSLALHGN 313 (708)
Q Consensus 237 ~~~~~~~-~~~i~~~~~s~~~~~l~~~~~-dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~v~~l~~~~~ 313 (708)
+.....+ ...+....|++++++|++++. |+.|++||+.. ++ ...... .+..++.++++...
T Consensus 251 ~~~~~~d~~~~~~~~~~d~d~~~L~lggkgDg~Iriwdl~~--------~~--------~~~~~~~~s~~~~~g~~~~pk 314 (493)
T PTZ00421 251 YSTVDLDQSSALFIPFFDEDTNLLYIGSKGEGNIRCFELMN--------ER--------LTFCSSYSSVEPHKGLCMMPK 314 (493)
T ss_pred eeEeccCCCCceEEEEEcCCCCEEEEEEeCCCeEEEEEeeC--------Cc--------eEEEeeccCCCCCcceEeccc
Confidence 3333322 345566778999999998884 99999999998 54 222222 24456677777643
Q ss_pred EEEEEcCCCeEEEEeCCCC
Q psy12614 314 RLYSGGLDSYLSLSYYPPK 332 (708)
Q Consensus 314 ~l~s~~~d~~i~iw~~~~~ 332 (708)
..+-...-...|+|.+...
T Consensus 315 ~~~dv~~~Ei~r~~~l~~~ 333 (493)
T PTZ00421 315 WSLDTRKCEIARFYALTYH 333 (493)
T ss_pred ccccccceeeeEEEEecCC
Confidence 3333333334456655443
|
|
| >KOG0305|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.2e-27 Score=229.79 Aligned_cols=269 Identities=18% Similarity=0.291 Sum_probs=233.3
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECCCCeEeEEEee
Q psy12614 32 IACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMRRLNIKSSTAV 109 (708)
Q Consensus 32 ~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~~~~~~~~~ 109 (708)
+.|+ ..+.||+|.. ..|.+|+..++.... ...-+. ..|+++.|+ |.+|++|..+|.|.|||..+.+.+..+.+
T Consensus 183 ldWs-s~n~laValg-~~vylW~~~s~~v~~-l~~~~~--~~vtSv~ws~~G~~LavG~~~g~v~iwD~~~~k~~~~~~~ 257 (484)
T KOG0305|consen 183 LDWS-SANVLAVALG-QSVYLWSASSGSVTE-LCSFGE--ELVTSVKWSPDGSHLAVGTSDGTVQIWDVKEQKKTRTLRG 257 (484)
T ss_pred hhcc-cCCeEEEEec-ceEEEEecCCCceEE-eEecCC--CceEEEEECCCCCEEEEeecCCeEEEEehhhccccccccC
Confidence 4566 4457888764 489999999998654 555446 899999999 99999999999999999999999999998
Q ss_pred -cCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCc
Q psy12614 110 -TSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGH 187 (708)
Q Consensus 110 -~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~ 187 (708)
|...|-+++|+ +..+.+|+.++.|..+|+...+.... .+.+|...|..+.|++|+.++|+|+.| .+.|||.....
T Consensus 258 ~h~~rvg~laW~--~~~lssGsr~~~I~~~dvR~~~~~~~-~~~~H~qeVCgLkws~d~~~lASGgnDN~~~Iwd~~~~~ 334 (484)
T KOG0305|consen 258 SHASRVGSLAWN--SSVLSSGSRDGKILNHDVRISQHVVS-TLQGHRQEVCGLKWSPDGNQLASGGNDNVVFIWDGLSPE 334 (484)
T ss_pred CcCceeEEEecc--CceEEEecCCCcEEEEEEecchhhhh-hhhcccceeeeeEECCCCCeeccCCCccceEeccCCCcc
Confidence 99999999998 56789999999999999998877643 588999999999999999999999999 99999997777
Q ss_pred eEEEEEecccCCCCCceeEEEEEEccCC--EEEEEc--CCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEE-
Q psy12614 188 AIHKMSLDKSSKFSKNTAVWCVAFCADF--TIITGD--SGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCA- 262 (708)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~l~~~~--~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~- 262 (708)
.+..+. .|...|.+++|+|-. .||+|+ .|+.|++||..+|+.+..+. ....|.+|.|++..+-|+++
T Consensus 335 p~~~~~-------~H~aAVKA~awcP~q~~lLAsGGGs~D~~i~fwn~~~g~~i~~vd-tgsQVcsL~Wsk~~kEi~sth 406 (484)
T KOG0305|consen 335 PKFTFT-------EHTAAVKALAWCPWQSGLLATGGGSADRCIKFWNTNTGARIDSVD-TGSQVCSLIWSKKYKELLSTH 406 (484)
T ss_pred ccEEEe-------ccceeeeEeeeCCCccCceEEcCCCcccEEEEEEcCCCcEecccc-cCCceeeEEEcCCCCEEEEec
Confidence 777776 448999999999944 477655 58999999999999998887 56899999999999777764
Q ss_pred -ecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEEEcCCCeEEEEeCCCC
Q psy12614 263 -GVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSGGLDSYLSLSYYPPK 332 (708)
Q Consensus 263 -~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~~ 332 (708)
..++.|.+|+..+ -+ ....+.+|...|..++++ |..+++|+.|.++++|++-+.
T Consensus 407 G~s~n~i~lw~~ps--------~~--------~~~~l~gH~~RVl~la~SPdg~~i~t~a~DETlrfw~~f~~ 463 (484)
T KOG0305|consen 407 GYSENQITLWKYPS--------MK--------LVAELLGHTSRVLYLALSPDGETIVTGAADETLRFWNLFDE 463 (484)
T ss_pred CCCCCcEEEEeccc--------cc--------eeeeecCCcceeEEEEECCCCCEEEEecccCcEEeccccCC
Confidence 4567899999988 54 678899999999999999 899999999999999998553
|
|
| >KOG0310|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.6e-27 Score=221.19 Aligned_cols=275 Identities=18% Similarity=0.273 Sum_probs=227.3
Q ss_pred CCCCcEEEEEEcCCCCE-EEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECCC
Q psy12614 24 PEPKVINCIACEPKSSR-LAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMRR 100 (708)
Q Consensus 24 ~h~~~v~~~~~s~~~~~-la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~ 100 (708)
...+.|++++|||...+ +|+.+ .-.+.||+..+..... .+...+ ..|.++.|- |..|+.|+..|.|+++|+.+
T Consensus 24 ke~~~vssl~fsp~~P~d~aVt~-S~rvqly~~~~~~~~k-~~srFk--~~v~s~~fR~DG~LlaaGD~sG~V~vfD~k~ 99 (487)
T KOG0310|consen 24 KEHNSVSSLCFSPKHPYDFAVTS-SVRVQLYSSVTRSVRK-TFSRFK--DVVYSVDFRSDGRLLAAGDESGHVKVFDMKS 99 (487)
T ss_pred cccCcceeEecCCCCCCceEEec-ccEEEEEecchhhhhh-hHHhhc--cceeEEEeecCCeEEEccCCcCcEEEecccc
Confidence 34578999999997655 55554 3489999998866544 565555 899999999 99999999999999999888
Q ss_pred CeEeEEEeecCCceEEEEEecCCC-EEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCC-CEEEEecCC-e
Q psy12614 101 LNIKSSTAVTSGTCWCLSVHKKKR-LLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSG-DYLVTGCAA-A 177 (708)
Q Consensus 101 ~~~~~~~~~~~~~v~~~~~s~~~~-~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~-~~l~~~~~d-~ 177 (708)
...++.+.+|..+|..+.|+|+++ .+++|++|+.+++||+.+...+ ..+.+|.+.|.+.+|+|-. ..+++|+.| .
T Consensus 100 r~iLR~~~ah~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a~v~--~~l~~htDYVR~g~~~~~~~hivvtGsYDg~ 177 (487)
T KOG0310|consen 100 RVILRQLYAHQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLSTAYVQ--AELSGHTDYVRCGDISPANDHIVVTGSYDGK 177 (487)
T ss_pred HHHHHHHhhccCceeEEEecccCCeEEEecCCCceEEEEEcCCcEEE--EEecCCcceeEeeccccCCCeEEEecCCCce
Confidence 778899999999999999999655 6778888999999999998863 7899999999999999975 478899999 9
Q ss_pred EEEEEcCCC-ceEEEEEecccCCCCCceeEEEEEEccCCEEEEEcCCCcEEEEeCCCC-eeEEEeeccccCeEEEEEeCC
Q psy12614 178 VRVWDIHKG-HAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTG-VQWSDVKTHKKDILALTVSED 255 (708)
Q Consensus 178 i~iwd~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~wd~~~~-~~~~~~~~~~~~i~~~~~s~~ 255 (708)
|++||.+.. ..+.++ .|..+|..+.+.|.|.+++......|++||+.+| +.+..+..|...|+|+++..+
T Consensus 178 vrl~DtR~~~~~v~el--------nhg~pVe~vl~lpsgs~iasAgGn~vkVWDl~~G~qll~~~~~H~KtVTcL~l~s~ 249 (487)
T KOG0310|consen 178 VRLWDTRSLTSRVVEL--------NHGCPVESVLALPSGSLIASAGGNSVKVWDLTTGGQLLTSMFNHNKTVTCLRLASD 249 (487)
T ss_pred EEEEEeccCCceeEEe--------cCCCceeeEEEcCCCCEEEEcCCCeEEEEEecCCceehhhhhcccceEEEEEeecC
Confidence 999999876 555555 4589999999999987555555678999999865 445555559999999999999
Q ss_pred CCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEEEcCCCeEEEEeC
Q psy12614 256 ENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSGGLDSYLSLSYY 329 (708)
Q Consensus 256 ~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~~~d~~i~iw~~ 329 (708)
+..|++++-|+.+++||..+ -+ ....+ ...++|.+++.+ +..++.|..+|.+.+-+.
T Consensus 250 ~~rLlS~sLD~~VKVfd~t~--------~K--------vv~s~-~~~~pvLsiavs~dd~t~viGmsnGlv~~rr~ 308 (487)
T KOG0310|consen 250 STRLLSGSLDRHVKVFDTTN--------YK--------VVHSW-KYPGPVLSIAVSPDDQTVVIGMSNGLVSIRRR 308 (487)
T ss_pred CceEeecccccceEEEEccc--------eE--------EEEee-ecccceeeEEecCCCceEEEecccceeeeehh
Confidence 99999999999999999766 21 23333 356889999999 689999999998877533
|
|
| >PTZ00421 coronin; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.2e-27 Score=238.01 Aligned_cols=227 Identities=16% Similarity=0.174 Sum_probs=185.5
Q ss_pred eccCCCCcEEEEEEcC-CCCEEEEEeCCCcEEEEeCCCCCe------EEEEEecCCCCCcEEEEEEe---CCEEEEEcCC
Q psy12614 21 FYAPEPKVINCIACEP-KSSRLAVSRADQSIEIWDISETPH------VDRVFIGDPLSNSIECLTWF---NDRLFSGGLQ 90 (708)
Q Consensus 21 ~~~~h~~~v~~~~~s~-~~~~la~~~~dg~v~iwd~~~~~~------~~~~~~~h~~~~~v~~l~~~---~~~l~s~~~d 90 (708)
.+.+|.+.|++++|+| ++++||+|+.||+|+|||+.++.. ....+.+|. ..|.+++|+ +++|++++.|
T Consensus 70 ~l~GH~~~V~~v~fsP~d~~~LaSgS~DgtIkIWdi~~~~~~~~~~~~l~~L~gH~--~~V~~l~f~P~~~~iLaSgs~D 147 (493)
T PTZ00421 70 ILLGQEGPIIDVAFNPFDPQKLFTASEDGTIMGWGIPEEGLTQNISDPIVHLQGHT--KKVGIVSFHPSAMNVLASAGAD 147 (493)
T ss_pred eEeCCCCCEEEEEEcCCCCCEEEEEeCCCEEEEEecCCCccccccCcceEEecCCC--CcEEEEEeCcCCCCEEEEEeCC
Confidence 4789999999999999 889999999999999999976531 223789999 999999999 4689999999
Q ss_pred CcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEeccccccc-EEEEEECCCCCE
Q psy12614 91 GFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGR-ILCTAWHSSGDY 169 (708)
Q Consensus 91 ~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-v~~~~~s~d~~~ 169 (708)
++|++||+++++.+..+.+|...|.+++|+|+|.+|++++.|+.|++||+++++.+ ..+.+|.+. +..+.|.+++..
T Consensus 148 gtVrIWDl~tg~~~~~l~~h~~~V~sla~spdG~lLatgs~Dg~IrIwD~rsg~~v--~tl~~H~~~~~~~~~w~~~~~~ 225 (493)
T PTZ00421 148 MVVNVWDVERGKAVEVIKCHSDQITSLEWNLDGSLLCTTSKDKKLNIIDPRDGTIV--SSVEAHASAKSQRCLWAKRKDL 225 (493)
T ss_pred CEEEEEECCCCeEEEEEcCCCCceEEEEEECCCCEEEEecCCCEEEEEECCCCcEE--EEEecCCCCcceEEEEcCCCCe
Confidence 99999999999999999999999999999999999999999999999999998876 567777654 457789999888
Q ss_pred EEEec----CC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEc-CCCcEEEEeCCCCeeEEEeec
Q psy12614 170 LVTGC----AA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGD-SGGFVRFWDGKTGVQWSDVKT 242 (708)
Q Consensus 170 l~~~~----~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~-~dg~i~~wd~~~~~~~~~~~~ 242 (708)
+++++ .| .|++||+++.......... .....+....|++++. +++++ .|+.|++||+.+++.+.....
T Consensus 226 ivt~G~s~s~Dr~VklWDlr~~~~p~~~~~~-----d~~~~~~~~~~d~d~~~L~lggkgDg~Iriwdl~~~~~~~~~~~ 300 (493)
T PTZ00421 226 IITLGCSKSQQRQIMLWDTRKMASPYSTVDL-----DQSSALFIPFFDEDTNLLYIGSKGEGNIRCFELMNERLTFCSSY 300 (493)
T ss_pred EEEEecCCCCCCeEEEEeCCCCCCceeEecc-----CCCCceEEEEEcCCCCEEEEEEeCCCeEEEEEeeCCceEEEeec
Confidence 87654 36 8999999876533222211 1144566678899985 66665 599999999999887765543
Q ss_pred -cccCeEEEEEeCCC
Q psy12614 243 -HKKDILALTVSEDE 256 (708)
Q Consensus 243 -~~~~i~~~~~s~~~ 256 (708)
+..++..++|.|.-
T Consensus 301 ~s~~~~~g~~~~pk~ 315 (493)
T PTZ00421 301 SSVEPHKGLCMMPKW 315 (493)
T ss_pred cCCCCCcceEecccc
Confidence 44567888888853
|
|
| >KOG0973|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.5e-27 Score=241.57 Aligned_cols=291 Identities=15% Similarity=0.210 Sum_probs=239.8
Q ss_pred ccCCCCcEEEEEEcCCCCEEEEEe--CCCcEEEEeCCC------------CCeEEEEEecCCCCCcEEEEEEe--CCEEE
Q psy12614 22 YAPEPKVINCIACEPKSSRLAVSR--ADQSIEIWDISE------------TPHVDRVFIGDPLSNSIECLTWF--NDRLF 85 (708)
Q Consensus 22 ~~~h~~~v~~~~~s~~~~~la~~~--~dg~v~iwd~~~------------~~~~~~~~~~h~~~~~v~~l~~~--~~~l~ 85 (708)
+.-+...|.++..+|||..+|+|+ .||.++||+.+. .+.+ .....|. +.|+|+.|+ |.+||
T Consensus 9 v~H~~~~IfSIdv~pdg~~~aTgGq~~d~~~~iW~~~~vl~~~~~~~~~l~k~l-~~m~~h~--~sv~CVR~S~dG~~lA 85 (942)
T KOG0973|consen 9 VNHNEKSIFSIDVHPDGVKFATGGQVLDGGIVIWSQDPVLDEKEEKNENLPKHL-CTMDDHD--GSVNCVRFSPDGSYLA 85 (942)
T ss_pred cccCCeeEEEEEecCCceeEecCCccccccceeeccccccchhhhhhcccchhh-eeecccc--CceeEEEECCCCCeEe
Confidence 344567799999999999999999 899999998864 1222 3677888 999999999 99999
Q ss_pred EEcCCCcEEEEECCC------------------CeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEE
Q psy12614 86 SGGLQGFVNEYDMRR------------------LNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLY 147 (708)
Q Consensus 86 s~~~d~~i~vwd~~~------------------~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~ 147 (708)
+|+.|+.|.||+... .+.+..+.+|.+.|..++|+|++.+||+++.|++|.+|+..+.+..
T Consensus 86 sGSDD~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~~~~lvS~s~DnsViiwn~~tF~~~- 164 (942)
T KOG0973|consen 86 SGSDDRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPDDSLLVSVSLDNSVIIWNAKTFELL- 164 (942)
T ss_pred eccCcceEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCCCccEEEEecccceEEEEccccceee-
Confidence 999999999999772 1367788999999999999999999999999999999999999776
Q ss_pred EEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcC---
Q psy12614 148 EKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDS--- 222 (708)
Q Consensus 148 ~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~--- 222 (708)
..+.+|.+.|..+.|.|-|+|+|+-+.| +|++|+..+-...+.+..+...- .....+..+.|+|||+ |++...
T Consensus 165 -~vl~~H~s~VKGvs~DP~Gky~ASqsdDrtikvwrt~dw~i~k~It~pf~~~-~~~T~f~RlSWSPDG~~las~nA~n~ 242 (942)
T KOG0973|consen 165 -KVLRGHQSLVKGVSWDPIGKYFASQSDDRTLKVWRTSDWGIEKSITKPFEES-PLTTFFLRLSWSPDGHHLASPNAVNG 242 (942)
T ss_pred -eeeecccccccceEECCccCeeeeecCCceEEEEEcccceeeEeeccchhhC-CCcceeeecccCCCcCeecchhhccC
Confidence 8999999999999999999999999999 99999987766666665443211 2366788999999997 554432
Q ss_pred -CCcEEEEeCCCCeeEEEeeccccCeEEEEEeCC--------C-----C----EEEEEecCCeEEEEEccCCcccccCCC
Q psy12614 223 -GGFVRFWDGKTGVQWSDVKTHKKDILALTVSED--------E-----N----YLYCAGVDPTVVCFQRTRKPQVCSTSG 284 (708)
Q Consensus 223 -dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~--------~-----~----~l~~~~~dg~i~iw~~~~~~~~~~~~g 284 (708)
-..+.|.+-.+.+.-..+-+|.+++.+++|+|. | + .+|+|+.|++|.||.... .
T Consensus 243 ~~~~~~IieR~tWk~~~~LvGH~~p~evvrFnP~lfe~~~~ng~~~~~~~~y~i~AvgSqDrSlSVW~T~~--------~ 314 (942)
T KOG0973|consen 243 GKSTIAIIERGTWKVDKDLVGHSAPVEVVRFNPKLFERNNKNGTSTQPNCYYCIAAVGSQDRSLSVWNTAL--------P 314 (942)
T ss_pred CcceeEEEecCCceeeeeeecCCCceEEEEeChHHhccccccCCccCCCcceEEEEEecCCccEEEEecCC--------C
Confidence 346888887777878889999999999999972 1 1 578999999999999866 2
Q ss_pred CCCCCcceEEeEEEeccccceEEEEEe--CCEEEEEcCCCeEEEEeCCCCc
Q psy12614 285 PEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSGGLDSYLSLSYYPPKT 333 (708)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~~~ 333 (708)
+ + ......-....|..++|+ |-.|+.++.||+|.+..++...
T Consensus 315 R----P---l~vi~~lf~~SI~DmsWspdG~~LfacS~DGtV~~i~Fee~E 358 (942)
T KOG0973|consen 315 R----P---LFVIHNLFNKSIVDMSWSPDGFSLFACSLDGTVALIHFEEKE 358 (942)
T ss_pred C----c---hhhhhhhhcCceeeeeEcCCCCeEEEEecCCeEEEEEcchHH
Confidence 1 1 122223346789999999 8999999999999999988754
|
|
| >KOG0310|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-27 Score=221.71 Aligned_cols=242 Identities=15% Similarity=0.250 Sum_probs=209.9
Q ss_pred ccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe---CCEEEEEcCCCcEEEEEC
Q psy12614 22 YAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF---NDRLFSGGLQGFVNEYDM 98 (708)
Q Consensus 22 ~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~---~~~l~s~~~d~~i~vwd~ 98 (708)
+..-...|.++.|-.||++||.|.+.|.|+|+|..+...++ .+.+|. .+|..+.|+ +..+++|+.|+.+++||+
T Consensus 64 ~srFk~~v~s~~fR~DG~LlaaGD~sG~V~vfD~k~r~iLR-~~~ah~--apv~~~~f~~~d~t~l~s~sDd~v~k~~d~ 140 (487)
T KOG0310|consen 64 FSRFKDVVYSVDFRSDGRLLAAGDESGHVKVFDMKSRVILR-QLYAHQ--APVHVTKFSPQDNTMLVSGSDDKVVKYWDL 140 (487)
T ss_pred HHhhccceeEEEeecCCeEEEccCCcCcEEEeccccHHHHH-HHhhcc--CceeEEEecccCCeEEEecCCCceEEEEEc
Confidence 44456789999999999999999999999999976655554 899999 999999999 778889999999999999
Q ss_pred CCCeEeEEEeecCCceEEEEEecCCC-EEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCCe
Q psy12614 99 RRLNIKSSTAVTSGTCWCLSVHKKKR-LLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAAA 177 (708)
Q Consensus 99 ~~~~~~~~~~~~~~~v~~~~~s~~~~-~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~ 177 (708)
.+......+.+|...|.|.+|+|... .+++|+.||.|++||.+..... ..-..|..+|..+.|-|.|..+++++.+.
T Consensus 141 s~a~v~~~l~~htDYVR~g~~~~~~~hivvtGsYDg~vrl~DtR~~~~~--v~elnhg~pVe~vl~lpsgs~iasAgGn~ 218 (487)
T KOG0310|consen 141 STAYVQAELSGHTDYVRCGDISPANDHIVVTGSYDGKVRLWDTRSLTSR--VVELNHGCPVESVLALPSGSLIASAGGNS 218 (487)
T ss_pred CCcEEEEEecCCcceeEeeccccCCCeEEEecCCCceEEEEEeccCCce--eEEecCCCceeeEEEcCCCCEEEEcCCCe
Confidence 99988778999999999999999655 7889999999999999876321 23345889999999999999999999999
Q ss_pred EEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCC
Q psy12614 178 VRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDE 256 (708)
Q Consensus 178 i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~ 256 (708)
+++||+.+|........ .|...|+|+.+..+++ |++++-|+.|++||+.+.+.+..+. -.++|.+++.+|++
T Consensus 219 vkVWDl~~G~qll~~~~------~H~KtVTcL~l~s~~~rLlS~sLD~~VKVfd~t~~Kvv~s~~-~~~pvLsiavs~dd 291 (487)
T KOG0310|consen 219 VKVWDLTTGGQLLTSMF------NHNKTVTCLRLASDSTRLLSGSLDRHVKVFDTTNYKVVHSWK-YPGPVLSIAVSPDD 291 (487)
T ss_pred EEEEEecCCceehhhhh------cccceEEEEEeecCCceEeecccccceEEEEccceEEEEeee-cccceeeEEecCCC
Confidence 99999997665544443 2488999999999885 9999999999999988888888876 67999999999999
Q ss_pred CEEEEEecCCeEEEEEccC
Q psy12614 257 NYLYCAGVDPTVVCFQRTR 275 (708)
Q Consensus 257 ~~l~~~~~dg~i~iw~~~~ 275 (708)
+.++.|..+|.+.+-+...
T Consensus 292 ~t~viGmsnGlv~~rr~~~ 310 (487)
T KOG0310|consen 292 QTVVIGMSNGLVSIRRREV 310 (487)
T ss_pred ceEEEecccceeeeehhhc
Confidence 9999999999888775544
|
|
| >KOG0294|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.7e-27 Score=205.21 Aligned_cols=238 Identities=18% Similarity=0.273 Sum_probs=206.4
Q ss_pred EEecCCCCCcEEEEEEeCCEEEEEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCC--EEEEEeCCCcEEEEEcc
Q psy12614 64 VFIGDPLSNSIECLTWFNDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKR--LLAAGTEQGHINLFQIS 141 (708)
Q Consensus 64 ~~~~h~~~~~v~~l~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~--~la~~~~d~~i~iwd~~ 141 (708)
.++.|. ++|++++.++.++|+|+.|-+|+|||+.....+..+..|.+.|+++.|.++-. .|++|+.||.|.+|+..
T Consensus 38 ~~~aH~--~sitavAVs~~~~aSGssDetI~IYDm~k~~qlg~ll~HagsitaL~F~~~~S~shLlS~sdDG~i~iw~~~ 115 (362)
T KOG0294|consen 38 AFSAHA--GSITALAVSGPYVASGSSDETIHIYDMRKRKQLGILLSHAGSITALKFYPPLSKSHLLSGSDDGHIIIWRVG 115 (362)
T ss_pred cccccc--cceeEEEecceeEeccCCCCcEEEEeccchhhhcceeccccceEEEEecCCcchhheeeecCCCcEEEEEcC
Confidence 567888 99999999999999999999999999999999999999999999999999875 89999999999999988
Q ss_pred CCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEE
Q psy12614 142 DEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IIT 219 (708)
Q Consensus 142 ~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~ 219 (708)
.-++. ..+.+|.+.|+.++.+|.+++.++.+.| .+++||+-+|+.-......+ ....+.|+|.|. ++.
T Consensus 116 ~W~~~--~slK~H~~~Vt~lsiHPS~KLALsVg~D~~lr~WNLV~Gr~a~v~~L~~--------~at~v~w~~~Gd~F~v 185 (362)
T KOG0294|consen 116 SWELL--KSLKAHKGQVTDLSIHPSGKLALSVGGDQVLRTWNLVRGRVAFVLNLKN--------KATLVSWSPQGDHFVV 185 (362)
T ss_pred CeEEe--eeecccccccceeEecCCCceEEEEcCCceeeeehhhcCccceeeccCC--------cceeeEEcCCCCEEEE
Confidence 77666 8999999999999999999999999999 99999999998877776642 233499999995 666
Q ss_pred EcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEe
Q psy12614 220 GDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRV 299 (708)
Q Consensus 220 ~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 299 (708)
+.. ..|-+|.+.+......+. ....+.++.|. ++..|++|+.|+.|.+||... +. +...+.
T Consensus 186 ~~~-~~i~i~q~d~A~v~~~i~-~~~r~l~~~~l-~~~~L~vG~d~~~i~~~D~ds--------~~--------~~~~~~ 246 (362)
T KOG0294|consen 186 SGR-NKIDIYQLDNASVFREIE-NPKRILCATFL-DGSELLVGGDNEWISLKDTDS--------DT--------PLTEFL 246 (362)
T ss_pred Eec-cEEEEEecccHhHhhhhh-ccccceeeeec-CCceEEEecCCceEEEeccCC--------Cc--------cceeee
Confidence 655 468999988777666554 23557777775 456899999999999999987 54 678889
Q ss_pred ccccceEEEEEe----CCEEEEEcCCCeEEEEeCCCC
Q psy12614 300 IHEGDVKSLALH----GNRLYSGGLDSYLSLSYYPPK 332 (708)
Q Consensus 300 ~~~~~v~~l~~~----~~~l~s~~~d~~i~iw~~~~~ 332 (708)
+|..+|.++.+. +.+|++++.||.|++||++..
T Consensus 247 AH~~RVK~i~~~~~~~~~~lvTaSSDG~I~vWd~~~~ 283 (362)
T KOG0294|consen 247 AHENRVKDIASYTNPEHEYLVTASSDGFIKVWDIDME 283 (362)
T ss_pred cchhheeeeEEEecCCceEEEEeccCceEEEEEcccc
Confidence 999999999966 579999999999999999765
|
|
| >KOG0973|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.9e-27 Score=238.94 Aligned_cols=302 Identities=15% Similarity=0.200 Sum_probs=232.5
Q ss_pred ceeEEEEEEccCCE-EEEEc--CCCcEEEEeCCC------------CeeEEEeeccccCeEEEEEeCCCCEEEEEecCCe
Q psy12614 203 NTAVWCVAFCADFT-IITGD--SGGFVRFWDGKT------------GVQWSDVKTHKKDILALTVSEDENYLYCAGVDPT 267 (708)
Q Consensus 203 ~~~v~~~~~~~~~~-l~~~~--~dg~i~~wd~~~------------~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~ 267 (708)
...|.++..+|||. +++|+ .||.+.+|+.+. .+.+.....|.+.|.|+.|+|||++||+|+.|+.
T Consensus 13 ~~~IfSIdv~pdg~~~aTgGq~~d~~~~iW~~~~vl~~~~~~~~~l~k~l~~m~~h~~sv~CVR~S~dG~~lAsGSDD~~ 92 (942)
T KOG0973|consen 13 EKSIFSIDVHPDGVKFATGGQVLDGGIVIWSQDPVLDEKEEKNENLPKHLCTMDDHDGSVNCVRFSPDGSYLASGSDDRL 92 (942)
T ss_pred CeeEEEEEecCCceeEecCCccccccceeeccccccchhhhhhcccchhheeeccccCceeEEEECCCCCeEeeccCcce
Confidence 56699999999995 99999 899999998642 1234556779999999999999999999999999
Q ss_pred EEEEEccC--CcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEEEcCCCeEEEEeCCCCceeecCccCCC
Q psy12614 268 VVCFQRTR--KPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQ 343 (708)
Q Consensus 268 i~iw~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~ 343 (708)
|.+|.... ....+-..|......+|.....+.+|.+.|..++|+ +.+|++++.|++|.+|+..+.
T Consensus 93 v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~~~~lvS~s~DnsViiwn~~tF----------- 161 (942)
T KOG0973|consen 93 VMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPDDSLLVSVSLDNSVIIWNAKTF----------- 161 (942)
T ss_pred EEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCCCccEEEEecccceEEEEccccc-----------
Confidence 99999883 223344445555678899999999999999999999 999999999999999988543
Q ss_pred CceEEEEcCCcEEEEEcCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEE-Ec
Q psy12614 344 STPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAY-ST 422 (708)
Q Consensus 344 ~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~-~~ 422 (708)
...+...+|.+.|..+.|.|-|+|+|+ ++
T Consensus 162 --------------------------------------------------~~~~vl~~H~s~VKGvs~DP~Gky~ASqsd 191 (942)
T KOG0973|consen 162 --------------------------------------------------ELLKVLRGHQSLVKGVSWDPIGKYFASQSD 191 (942)
T ss_pred --------------------------------------------------eeeeeeecccccccceEECCccCeeeeecC
Confidence 345556689999999999999999999 78
Q ss_pred CCceEEEEEEecCCcceeEEeecCCcccc-cceeEEEEEecCCCeEEEEecCCc----EEEecCCCeEEEEEecCCCCCc
Q psy12614 423 ESCVRLHSLDLDGDKPQISRIKNLPAPLF-KSIFTHVLISADSTLLLAVSLNGP----LYIIDLSSLEIKYCVDPYKSNL 497 (708)
Q Consensus 423 d~~i~i~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~s~d~~~l~~~~~dg~----i~~~~~~~~~~~~~~~~~~~~~ 497 (708)
|++|+||+...-+ ..+.+.+.-++.. ......+.|||||.+|++...-.. +-.++.++.+.-..|- ||
T Consensus 192 Drtikvwrt~dw~---i~k~It~pf~~~~~~T~f~RlSWSPDG~~las~nA~n~~~~~~~IieR~tWk~~~~Lv---GH- 264 (942)
T KOG0973|consen 192 DRTLKVWRTSDWG---IEKSITKPFEESPLTTFFLRLSWSPDGHHLASPNAVNGGKSTIAIIERGTWKVDKDLV---GH- 264 (942)
T ss_pred CceEEEEEcccce---eeEeeccchhhCCCcceeeecccCCCcCeecchhhccCCcceeEEEecCCceeeeeee---cC-
Confidence 9999999965411 1122111111111 334555999999999998654222 4444445444444443 66
Q ss_pred cCcceEEEEECC-----CCc------------EEEEEecCCeEEEEECCceeee---cCCCCCCceEEEEcCCCCEEEEE
Q psy12614 498 MSDVISLVQMSE-----CKQ------------YIVCADRKSHVVIWKNGQHHAS---LPRYRKPSTAMAIHPTLSTLVTV 557 (708)
Q Consensus 498 ~~~~i~~~~~s~-----~~~------------~l~~~~~d~~i~iw~~~~~~~~---~~~~~~~v~~l~~s~d~~~l~~~ 557 (708)
..++.+++|+| ..+ .+|+|+.|++|.||......-- ..-....|..++|+|||-.|+.+
T Consensus 265 -~~p~evvrFnP~lfe~~~~ng~~~~~~~~y~i~AvgSqDrSlSVW~T~~~RPl~vi~~lf~~SI~DmsWspdG~~Lfac 343 (942)
T KOG0973|consen 265 -SAPVEVVRFNPKLFERNNKNGTSTQPNCYYCIAAVGSQDRSLSVWNTALPRPLFVIHNLFNKSIVDMSWSPDGFSLFAC 343 (942)
T ss_pred -CCceEEEEeChHHhccccccCCccCCCcceEEEEEecCCccEEEEecCCCCchhhhhhhhcCceeeeeEcCCCCeEEEE
Confidence 77999999998 111 6889999999999999733332 22345789999999999999999
Q ss_pred ecCCcEEEEEcCCCCC
Q psy12614 558 YSDHRIVEFDLNRKAF 573 (708)
Q Consensus 558 ~~dg~i~vwd~~~~~~ 573 (708)
+.||+|.+..++..++
T Consensus 344 S~DGtV~~i~Fee~El 359 (942)
T KOG0973|consen 344 SLDGTVALIHFEEKEL 359 (942)
T ss_pred ecCCeEEEEEcchHHh
Confidence 9999999999986654
|
|
| >KOG0277|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=1e-27 Score=203.34 Aligned_cols=237 Identities=18% Similarity=0.317 Sum_probs=203.0
Q ss_pred CCcEEEEEEcCCC-CEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe---CCEEEEEcCCCcEEEEECCCC
Q psy12614 26 PKVINCIACEPKS-SRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF---NDRLFSGGLQGFVNEYDMRRL 101 (708)
Q Consensus 26 ~~~v~~~~~s~~~-~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~---~~~l~s~~~d~~i~vwd~~~~ 101 (708)
.+.+..++|+++. +.+++++.||+++|||..........++.|+ ..|.++.|+ +..+++++-|++|++|+....
T Consensus 60 ~D~LfdV~Wse~~e~~~~~a~GDGSLrl~d~~~~s~Pi~~~kEH~--~EV~Svdwn~~~r~~~ltsSWD~TiKLW~~~r~ 137 (311)
T KOG0277|consen 60 EDGLFDVAWSENHENQVIAASGDGSLRLFDLTMPSKPIHKFKEHK--REVYSVDWNTVRRRIFLTSSWDGTIKLWDPNRP 137 (311)
T ss_pred ccceeEeeecCCCcceEEEEecCceEEEeccCCCCcchhHHHhhh--hheEEeccccccceeEEeeccCCceEeecCCCC
Confidence 5778899999864 6788889999999999776555445899999 999999999 777888899999999999999
Q ss_pred eEeEEEeecCCceEEEEEec-CCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCC-CCEEEEecCC-eE
Q psy12614 102 NIKSSTAVTSGTCWCLSVHK-KKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSS-GDYLVTGCAA-AV 178 (708)
Q Consensus 102 ~~~~~~~~~~~~v~~~~~s~-~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d-~~~l~~~~~d-~i 178 (708)
+.+.++.+|...|...+|+| ..+.+++++.|+.+++||++..... ..+..|...+.++.|+.- ...|++++.| .|
T Consensus 138 ~Sv~Tf~gh~~~Iy~a~~sp~~~nlfas~Sgd~~l~lwdvr~~gk~--~~i~ah~~Eil~cdw~ky~~~vl~Tg~vd~~v 215 (311)
T KOG0277|consen 138 NSVQTFNGHNSCIYQAAFSPHIPNLFASASGDGTLRLWDVRSPGKF--MSIEAHNSEILCCDWSKYNHNVLATGGVDNLV 215 (311)
T ss_pred cceEeecCCccEEEEEecCCCCCCeEEEccCCceEEEEEecCCCce--eEEEeccceeEeecccccCCcEEEecCCCceE
Confidence 99999999999999999999 5779999999999999999854333 458889999999999874 4677899999 99
Q ss_pred EEEEcCCCce-EEEEEecccCCCCCceeEEEEEEccCCE--EEEEcCCCcEEEEeCCCC-eeEEEeeccccCeEEEEEeC
Q psy12614 179 RVWDIHKGHA-IHKMSLDKSSKFSKNTAVWCVAFCADFT--IITGDSGGFVRFWDGKTG-VQWSDVKTHKKDILALTVSE 254 (708)
Q Consensus 179 ~iwd~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~--l~~~~~dg~i~~wd~~~~-~~~~~~~~~~~~i~~~~~s~ 254 (708)
+.||+++-+. +..+. +|.-.|..+.|+|-.. |++++.|-++++||...+ ..+.+...|..-+..+.|++
T Consensus 216 r~wDir~~r~pl~eL~-------gh~~AVRkvk~Sph~~~lLaSasYDmT~riw~~~~~ds~~e~~~~HtEFv~g~Dws~ 288 (311)
T KOG0277|consen 216 RGWDIRNLRTPLFELN-------GHGLAVRKVKFSPHHASLLASASYDMTVRIWDPERQDSAIETVDHHTEFVCGLDWSL 288 (311)
T ss_pred EEEehhhccccceeec-------CCceEEEEEecCcchhhHhhhccccceEEecccccchhhhhhhhccceEEecccccc
Confidence 9999987653 33332 5599999999999774 889999999999998844 45667778999999999987
Q ss_pred -CCCEEEEEecCCeEEEEEc
Q psy12614 255 -DENYLYCAGVDPTVVCFQR 273 (708)
Q Consensus 255 -~~~~l~~~~~dg~i~iw~~ 273 (708)
+..++|+.+-|..+++|+.
T Consensus 289 ~~~~~vAs~gWDe~l~Vw~p 308 (311)
T KOG0277|consen 289 FDPGQVASTGWDELLYVWNP 308 (311)
T ss_pred ccCceeeecccccceeeecc
Confidence 4578999999999999984
|
|
| >KOG0640|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.9e-27 Score=206.18 Aligned_cols=295 Identities=15% Similarity=0.244 Sum_probs=229.7
Q ss_pred EEEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECCCC------------------eEeEEEeecCCceEEEEEec
Q psy12614 62 DRVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMRRL------------------NIKSSTAVTSGTCWCLSVHK 121 (708)
Q Consensus 62 ~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~------------------~~~~~~~~~~~~v~~~~~s~ 121 (708)
...+..|+ +++++.+|+ |.++++|+.|..|+|.|++.. -.++++-.|...|+++.|+|
T Consensus 105 t~ylt~HK--~~cR~aafs~DG~lvATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~devn~l~FHP 182 (430)
T KOG0640|consen 105 TKYLTSHK--SPCRAAAFSPDGSLVATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVDEVNDLDFHP 182 (430)
T ss_pred eEEEeecc--cceeeeeeCCCCcEEEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccCcccceeecc
Confidence 35788999 999999999 999999999999999998721 14667778999999999999
Q ss_pred CCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCC
Q psy12614 122 KKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKF 200 (708)
Q Consensus 122 ~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~ 200 (708)
....|++|+.|++|++||+................+|.++.|+|.|.+|+.|... ++++||+++-++...-. +..
T Consensus 183 re~ILiS~srD~tvKlFDfsK~saKrA~K~~qd~~~vrsiSfHPsGefllvgTdHp~~rlYdv~T~Qcfvsan-Pd~--- 258 (430)
T KOG0640|consen 183 RETILISGSRDNTVKLFDFSKTSAKRAFKVFQDTEPVRSISFHPSGEFLLVGTDHPTLRLYDVNTYQCFVSAN-PDD--- 258 (430)
T ss_pred hhheEEeccCCCeEEEEecccHHHHHHHHHhhccceeeeEeecCCCceEEEecCCCceeEEeccceeEeeecC-ccc---
Confidence 9999999999999999999865443111222345689999999999999999999 99999999988766554 222
Q ss_pred CCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCeeEEEee-cc-ccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCc
Q psy12614 201 SKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDVK-TH-KKDILALTVSEDENYLYCAGVDPTVVCFQRTRKP 277 (708)
Q Consensus 201 ~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~~-~~-~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~ 277 (708)
.|...|+++.+++.|+ .++++.||.|++||--+++++.++. .| ...|.+..|..+++++++.+.|..+++|.+.+
T Consensus 259 qht~ai~~V~Ys~t~~lYvTaSkDG~IklwDGVS~rCv~t~~~AH~gsevcSa~Ftkn~kyiLsSG~DS~vkLWEi~t-- 336 (430)
T KOG0640|consen 259 QHTGAITQVRYSSTGSLYVTASKDGAIKLWDGVSNRCVRTIGNAHGGSEVCSAVFTKNGKYILSSGKDSTVKLWEIST-- 336 (430)
T ss_pred ccccceeEEEecCCccEEEEeccCCcEEeeccccHHHHHHHHhhcCCceeeeEEEccCCeEEeecCCcceeeeeeecC--
Confidence 5599999999999997 8899999999999999999988874 34 45789999999999999999999999999999
Q ss_pred ccccCCCCCCCCcceEEeEEEeccccceEEEEEeCCEEEEEcCCCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEE
Q psy12614 278 QVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALHGNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVL 357 (708)
Q Consensus 278 ~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~ 357 (708)
|. .+..+.+-. ..|. ........|.....+++
T Consensus 337 ------~R--------~l~~YtGAg-----------------~tgr-----------------q~~rtqAvFNhtEdyVl 368 (430)
T KOG0640|consen 337 ------GR--------MLKEYTGAG-----------------TTGR-----------------QKHRTQAVFNHTEDYVL 368 (430)
T ss_pred ------Cc--------eEEEEecCC-----------------cccc-----------------hhhhhhhhhcCccceEE
Confidence 64 333333210 0111 11112233344444444
Q ss_pred EE--cCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEE-EcCCceEEEEEE
Q psy12614 358 LQ--YTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAY-STESCVRLHSLD 432 (708)
Q Consensus 358 ~~--~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~-~~d~~i~i~~~~ 432 (708)
.- ..+.+.-||..+.. +......+|++.+..+.-||.+.-+.+ ++|-.+++|--.
T Consensus 369 ~pDEas~slcsWdaRtad--------------------r~~l~slgHn~a~R~i~HSP~~p~FmTcsdD~raRFWyrr 426 (430)
T KOG0640|consen 369 FPDEASNSLCSWDARTAD--------------------RVALLSLGHNGAVRWIVHSPVEPAFMTCSDDFRARFWYRR 426 (430)
T ss_pred ccccccCceeeccccchh--------------------hhhhcccCCCCCceEEEeCCCCCceeeecccceeeeeeec
Confidence 42 44567778877765 444455589999999999999988887 559999999643
|
|
| >KOG1332|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-27 Score=201.97 Aligned_cols=250 Identities=17% Similarity=0.244 Sum_probs=208.0
Q ss_pred eeeccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCC--eEEEEEecCCCCCcEEEEEEe----CCEEEEEcCCCc
Q psy12614 19 IKFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETP--HVDRVFIGDPLSNSIECLTWF----NDRLFSGGLQGF 92 (708)
Q Consensus 19 ~~~~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~--~~~~~~~~h~~~~~v~~l~~~----~~~l~s~~~d~~ 92 (708)
+++-.+|.+.|..+.+.--|++||+++.|++|+|+...++. .+...|.||. ++|..++|. |.+||+++.||.
T Consensus 4 q~idt~H~D~IHda~lDyygkrlATcsSD~tVkIf~v~~n~~s~ll~~L~Gh~--GPVwqv~wahPk~G~iLAScsYDgk 81 (299)
T KOG1332|consen 4 QTIDTQHEDMIHDAQLDYYGKRLATCSSDGTVKIFEVRNNGQSKLLAELTGHS--GPVWKVAWAHPKFGTILASCSYDGK 81 (299)
T ss_pred eehhhhhhhhhhHhhhhhhcceeeeecCCccEEEEEEcCCCCceeeeEecCCC--CCeeEEeecccccCcEeeEeecCce
Confidence 34567899999999999999999999999999999998754 3445899999 999999998 999999999999
Q ss_pred EEEEECCCCe--EeEEEeecCCceEEEEEecC--CCEEEEEeCCCcEEEEEccCC-cEEEEEecccccccEEEEEECCC-
Q psy12614 93 VNEYDMRRLN--IKSSTAVTSGTCWCLSVHKK--KRLLAAGTEQGHINLFQISDE-GLLYEKLLDRQQGRILCTAWHSS- 166 (708)
Q Consensus 93 i~vwd~~~~~--~~~~~~~~~~~v~~~~~s~~--~~~la~~~~d~~i~iwd~~~~-~~~~~~~~~~~~~~v~~~~~s~d- 166 (708)
|.||.-++++ .......|...|++++|.|. |-.||+++.||.|.+.+.++. .....+....|.-.|++++|.|-
T Consensus 82 VIiWke~~g~w~k~~e~~~h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~~g~w~t~ki~~aH~~GvnsVswapa~ 161 (299)
T KOG1332|consen 82 VIIWKEENGRWTKAYEHAAHSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDSSGGWTTSKIVFAHEIGVNSVSWAPAS 161 (299)
T ss_pred EEEEecCCCchhhhhhhhhhcccceeecccccccceEEEEeeCCCcEEEEEEcCCCCccchhhhhccccccceeeecCcC
Confidence 9999998885 34556689999999999985 568999999999999998865 44444677889999999999986
Q ss_pred --C-----------CEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCC-----EEEEEcCCCcEE
Q psy12614 167 --G-----------DYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADF-----TIITGDSGGFVR 227 (708)
Q Consensus 167 --~-----------~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-----~l~~~~~dg~i~ 227 (708)
| +.|++|+-| .|+||+..+++-+..-... +|.+.|+.++|.|.- .+++++.||++.
T Consensus 162 ~~g~~~~~~~~~~~krlvSgGcDn~VkiW~~~~~~w~~e~~l~-----~H~dwVRDVAwaP~~gl~~s~iAS~SqDg~vi 236 (299)
T KOG1332|consen 162 APGSLVDQGPAAKVKRLVSGGCDNLVKIWKFDSDSWKLERTLE-----GHKDWVRDVAWAPSVGLPKSTIASCSQDGTVI 236 (299)
T ss_pred CCccccccCcccccceeeccCCccceeeeecCCcchhhhhhhh-----hcchhhhhhhhccccCCCceeeEEecCCCcEE
Confidence 4 579999999 9999999887443333222 569999999999954 499999999999
Q ss_pred EEeCCCC-e--eEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccC
Q psy12614 228 FWDGKTG-V--QWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTR 275 (708)
Q Consensus 228 ~wd~~~~-~--~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~ 275 (708)
||..+.. + ....+......+..+.||..|+.|++++.|+.+.+|.-..
T Consensus 237 Iwt~~~e~e~wk~tll~~f~~~~w~vSWS~sGn~LaVs~GdNkvtlwke~~ 287 (299)
T KOG1332|consen 237 IWTKDEEYEPWKKTLLEEFPDVVWRVSWSLSGNILAVSGGDNKVTLWKENV 287 (299)
T ss_pred EEEecCccCcccccccccCCcceEEEEEeccccEEEEecCCcEEEEEEeCC
Confidence 9986522 1 1222334567899999999999999999999999997664
|
|
| >KOG0772|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.7e-27 Score=217.91 Aligned_cols=291 Identities=15% Similarity=0.237 Sum_probs=219.6
Q ss_pred eeccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeE---EEEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEE
Q psy12614 20 KFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHV---DRVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVN 94 (708)
Q Consensus 20 ~~~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~---~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~ 94 (708)
-.+.+|+..|+++++.|.|-++++|+.|..|+.||++.-..- .+.+.... ...|++++|+ |+.|++.+.....+
T Consensus 161 i~l~hgtk~Vsal~~Dp~GaR~~sGs~Dy~v~~wDf~gMdas~~~fr~l~P~E-~h~i~sl~ys~Tg~~iLvvsg~aqak 239 (641)
T KOG0772|consen 161 IQLKHGTKIVSALAVDPSGARFVSGSLDYTVKFWDFQGMDASMRSFRQLQPCE-THQINSLQYSVTGDQILVVSGSAQAK 239 (641)
T ss_pred EeccCCceEEEEeeecCCCceeeeccccceEEEEecccccccchhhhccCccc-ccccceeeecCCCCeEEEEecCccee
Confidence 347889999999999999999999999999999999862211 12333222 3679999999 88898888899999
Q ss_pred EEECCCCeEeE------------EEeecCCceEEEEEecCCC-EEEEEeCCCcEEEEEccCCcEE----EEEeccccccc
Q psy12614 95 EYDMRRLNIKS------------STAVTSGTCWCLSVHKKKR-LLAAGTEQGHINLFQISDEGLL----YEKLLDRQQGR 157 (708)
Q Consensus 95 vwd~~~~~~~~------------~~~~~~~~v~~~~~s~~~~-~la~~~~d~~i~iwd~~~~~~~----~~~~~~~~~~~ 157 (708)
++|-....... ..++|...++|-+|+|+.+ .+++++.||+++|||+.+.+.. ..+...+..-.
T Consensus 240 l~DRdG~~~~e~~KGDQYI~Dm~nTKGHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~q~qVik~k~~~g~Rv~ 319 (641)
T KOG0772|consen 240 LLDRDGFEIVEFSKGDQYIRDMYNTKGHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKSQLQVIKTKPAGGKRVP 319 (641)
T ss_pred EEccCCceeeeeeccchhhhhhhccCCceeeeeccccccCcccceEEecCCCcEEEEecCCchhheeEEeeccCCCcccC
Confidence 99976644332 2358899999999999764 6889999999999999865422 11122233457
Q ss_pred EEEEEECCCCCEEEEecCC-eEEEEEcCCCce--EEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCC
Q psy12614 158 ILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHA--IHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKT 233 (708)
Q Consensus 158 v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~ 233 (708)
+..++|++||+.||+|+.| .|.+|+..+... ...+...| .....|+|+.|++||+ |++-+.|+++++||++.
T Consensus 320 ~tsC~~nrdg~~iAagc~DGSIQ~W~~~~~~v~p~~~vk~AH----~~g~~Itsi~FS~dg~~LlSRg~D~tLKvWDLrq 395 (641)
T KOG0772|consen 320 VTSCAWNRDGKLIAAGCLDGSIQIWDKGSRTVRPVMKVKDAH----LPGQDITSISFSYDGNYLLSRGFDDTLKVWDLRQ 395 (641)
T ss_pred ceeeecCCCcchhhhcccCCceeeeecCCcccccceEeeecc----CCCCceeEEEeccccchhhhccCCCceeeeeccc
Confidence 8999999999999999999 999999754332 22222222 2244899999999996 99999999999999987
Q ss_pred Ce-eEEEeec--cccCeEEEEEeCCCCEEEEEec------CCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccc
Q psy12614 234 GV-QWSDVKT--HKKDILALTVSEDENYLYCAGV------DPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGD 304 (708)
Q Consensus 234 ~~-~~~~~~~--~~~~i~~~~~s~~~~~l~~~~~------dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 304 (708)
.+ ++....+ ...+-+.++|||+.++|++|+. .|.+.+||..+ -+ ....+......
T Consensus 396 ~kkpL~~~tgL~t~~~~tdc~FSPd~kli~TGtS~~~~~~~g~L~f~d~~t--------~d--------~v~ki~i~~aS 459 (641)
T KOG0772|consen 396 FKKPLNVRTGLPTPFPGTDCCFSPDDKLILTGTSAPNGMTAGTLFFFDRMT--------LD--------TVYKIDISTAS 459 (641)
T ss_pred cccchhhhcCCCccCCCCccccCCCceEEEecccccCCCCCceEEEEeccc--------ee--------eEEEecCCCce
Confidence 54 3444332 2334578999999999998864 46899999887 32 45555566778
Q ss_pred eEEEEEe--CCEEEEEcCCCeEEEEeCCC
Q psy12614 305 VKSLALH--GNRLYSGGLDSYLSLSYYPP 331 (708)
Q Consensus 305 v~~l~~~--~~~l~s~~~d~~i~iw~~~~ 331 (708)
|..+.|+ =+.++.++.||.+++|--.+
T Consensus 460 vv~~~WhpkLNQi~~gsgdG~~~vyYdp~ 488 (641)
T KOG0772|consen 460 VVRCLWHPKLNQIFAGSGDGTAHVYYDPN 488 (641)
T ss_pred EEEEeecchhhheeeecCCCceEEEECcc
Confidence 8889999 56778888889988874433
|
|
| >KOG0299|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-26 Score=213.38 Aligned_cols=291 Identities=16% Similarity=0.176 Sum_probs=230.8
Q ss_pred eEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEE---EEE------------ec-ccccccEEEEEECCCC
Q psy12614 104 KSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLL---YEK------------LL-DRQQGRILCTAWHSSG 167 (708)
Q Consensus 104 ~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~---~~~------------~~-~~~~~~v~~~~~s~d~ 167 (708)
...+..|.-+|.+++++||+++.++++.+++|.-|++.+++.. ... .- ..|...+.+++.|+||
T Consensus 135 ~~~~~~H~~s~~~vals~d~~~~fsask~g~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~k~~r~~h~keil~~avS~Dg 214 (479)
T KOG0299|consen 135 FRVIGKHQLSVTSVALSPDDKRVFSASKDGTILKWDVLTGKKDRYIIERDEVLKSHGNPLKESRKGHVKEILTLAVSSDG 214 (479)
T ss_pred ceeeccccCcceEEEeeccccceeecCCCcceeeeehhcCcccccccccchhhhhccCCCCcccccccceeEEEEEcCCC
Confidence 5566789999999999999999999999999999999887632 101 01 2677889999999999
Q ss_pred CEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCC-EEEEEcCCCcEEEEeCCCCeeEEEeecccc
Q psy12614 168 DYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADF-TIITGDSGGFVRFWDGKTGVQWSDVKTHKK 245 (708)
Q Consensus 168 ~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~ 245 (708)
+|||+|+.| .|.||+..+.+.++.+. +|.+.|.+++|-... ++++++.|+.|++|+++....+.++.+|..
T Consensus 215 kylatgg~d~~v~Iw~~~t~ehv~~~~-------ghr~~V~~L~fr~gt~~lys~s~Drsvkvw~~~~~s~vetlyGHqd 287 (479)
T KOG0299|consen 215 KYLATGGRDRHVQIWDCDTLEHVKVFK-------GHRGAVSSLAFRKGTSELYSASADRSVKVWSIDQLSYVETLYGHQD 287 (479)
T ss_pred cEEEecCCCceEEEecCcccchhhccc-------ccccceeeeeeecCccceeeeecCCceEEEehhHhHHHHHHhCCcc
Confidence 999999999 99999999999998876 458999999998655 599999999999999999999999999999
Q ss_pred CeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe-CCEEEEEcCCCeE
Q psy12614 246 DILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH-GNRLYSGGLDSYL 324 (708)
Q Consensus 246 ~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~-~~~l~s~~~d~~i 324 (708)
.|..+....-++.+-+|+.|+++++|++.. . ....+.+|.+.+.+++|- ...+++|+.+|.|
T Consensus 288 ~v~~IdaL~reR~vtVGgrDrT~rlwKi~e--------e---------sqlifrg~~~sidcv~~In~~HfvsGSdnG~I 350 (479)
T KOG0299|consen 288 GVLGIDALSRERCVTVGGRDRTVRLWKIPE--------E---------SQLIFRGGEGSIDCVAFINDEHFVSGSDNGSI 350 (479)
T ss_pred ceeeechhcccceEEeccccceeEEEeccc--------c---------ceeeeeCCCCCeeeEEEecccceeeccCCceE
Confidence 999999988888887888999999999966 2 345677888999999998 9999999999999
Q ss_pred EEEeCCCCceeecCccCCCCceEEEEcCCcEEEEEcCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCC
Q psy12614 325 SLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNA 404 (708)
Q Consensus 325 ~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (708)
.+|++..+...-.. ....+- ..... ...++.
T Consensus 351 aLWs~~KKkplf~~-----------------------------~~AHgv-------------------~~~~~-~~~~~~ 381 (479)
T KOG0299|consen 351 ALWSLLKKKPLFTS-----------------------------RLAHGV-------------------IPELD-PVNGNF 381 (479)
T ss_pred EEeeecccCceeEe-----------------------------eccccc-------------------cCCcc-cccccc
Confidence 99999665411111 011000 00000 012336
Q ss_pred ceEEEEeCCCCcEEEEEc-CCceEEEEEEecCCcceeEEeecCCcccccceeEEEEEecCCCeEEEEec
Q psy12614 405 TIRCSVVSNDGKYVAYST-ESCVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVLISADSTLLLAVSL 472 (708)
Q Consensus 405 ~i~~~~~s~~g~~l~~~~-d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~~~~~ 472 (708)
.|++++..|...++|+|+ +|.|++|.+.. +...+..+..++- ..-|++++|+++|+.++++..
T Consensus 382 Witsla~i~~sdL~asGS~~G~vrLW~i~~--g~r~i~~l~~ls~---~GfVNsl~f~~sgk~ivagiG 445 (479)
T KOG0299|consen 382 WITSLAVIPGSDLLASGSWSGCVRLWKIED--GLRAINLLYSLSL---VGFVNSLAFSNSGKRIVAGIG 445 (479)
T ss_pred ceeeeEecccCceEEecCCCCceEEEEecC--Cccccceeeeccc---ccEEEEEEEccCCCEEEEecc
Confidence 899999999999999976 99999999987 3223333322331 346788999999997776643
|
|
| >KOG0268|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.1e-28 Score=215.06 Aligned_cols=278 Identities=14% Similarity=0.175 Sum_probs=231.3
Q ss_pred EEecCCCCCcEEEEEEe---CCEEEEEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEc
Q psy12614 64 VFIGDPLSNSIECLTWF---NDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQI 140 (708)
Q Consensus 64 ~~~~h~~~~~v~~l~~~---~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~ 140 (708)
.|.||. .+|.+++-+ -..+++|+.||.|++||+.+..+..++..|.+.|..|++.. ..++++++|.+|+.|.+
T Consensus 61 ~L~gHr--dGV~~lakhp~~ls~~aSGs~DG~VkiWnlsqR~~~~~f~AH~G~V~Gi~v~~--~~~~tvgdDKtvK~wk~ 136 (433)
T KOG0268|consen 61 SLDGHR--DGVSCLAKHPNKLSTVASGSCDGEVKIWNLSQRECIRTFKAHEGLVRGICVTQ--TSFFTVGDDKTVKQWKI 136 (433)
T ss_pred hccccc--cccchhhcCcchhhhhhccccCceEEEEehhhhhhhheeecccCceeeEEecc--cceEEecCCcceeeeec
Confidence 678999 999999998 35789999999999999999999999999999999999987 66888999999999998
Q ss_pred cCCcEEEEEecccccccEEEEEECCCCCEEEEecCCeEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE--EE
Q psy12614 141 SDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAAAVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT--II 218 (708)
Q Consensus 141 ~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--l~ 218 (708)
+.. .. .++.+ ...+..+.-+..+..+++++.+ |.|||.+...++..+..+ ...|.++.|+|..+ |+
T Consensus 137 ~~~-p~--~tilg-~s~~~gIdh~~~~~~FaTcGe~-i~IWD~~R~~Pv~smswG-------~Dti~svkfNpvETsILa 204 (433)
T KOG0268|consen 137 DGP-PL--HTILG-KSVYLGIDHHRKNSVFATCGEQ-IDIWDEQRDNPVSSMSWG-------ADSISSVKFNPVETSILA 204 (433)
T ss_pred cCC-cc--eeeec-cccccccccccccccccccCce-eeecccccCCccceeecC-------CCceeEEecCCCcchhee
Confidence 874 22 44433 4556777777777778877765 999999999999999887 78899999999875 77
Q ss_pred EEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEE
Q psy12614 219 TGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNR 298 (708)
Q Consensus 219 ~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~ 298 (708)
++++|+.|.+||++++++++.+. ....-..++|+|++-.+++|+.|..++.||++. -+ .++...
T Consensus 205 s~~sDrsIvLyD~R~~~Pl~KVi-~~mRTN~IswnPeafnF~~a~ED~nlY~~DmR~--------l~-------~p~~v~ 268 (433)
T KOG0268|consen 205 SCASDRSIVLYDLRQASPLKKVI-LTMRTNTICWNPEAFNFVAANEDHNLYTYDMRN--------LS-------RPLNVH 268 (433)
T ss_pred eeccCCceEEEecccCCccceee-eeccccceecCccccceeeccccccceehhhhh--------hc-------ccchhh
Confidence 88899999999999999887765 345557899999888888999999999999987 21 146677
Q ss_pred eccccceEEEEEe--CCEEEEEcCCCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEEEcCCeEEEEEecCCCCCC
Q psy12614 299 VIHEGDVKSLALH--GNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQSTD 376 (708)
Q Consensus 299 ~~~~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~~~ 376 (708)
.+|.+.|.++.|+ |.-+++|+-|.+|+||..+.+.-+.+. .
T Consensus 269 ~dhvsAV~dVdfsptG~EfvsgsyDksIRIf~~~~~~SRdiY-----------------------------h-------- 311 (433)
T KOG0268|consen 269 KDHVSAVMDVDFSPTGQEFVSGSYDKSIRIFPVNHGHSRDIY-----------------------------H-------- 311 (433)
T ss_pred cccceeEEEeccCCCcchhccccccceEEEeecCCCcchhhh-----------------------------h--------
Confidence 8899999999999 999999999999999988665422221 1
Q ss_pred CCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEEEc-CCceEEEEEEe
Q psy12614 377 LSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYST-ESCVRLHSLDL 433 (708)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~-d~~i~i~~~~~ 433 (708)
+.-...|.|+.||.|.+++++|+ |+.|++|....
T Consensus 312 -----------------------tkRMq~V~~Vk~S~Dskyi~SGSdd~nvRlWka~A 346 (433)
T KOG0268|consen 312 -----------------------TKRMQHVFCVKYSMDSKYIISGSDDGNVRLWKAKA 346 (433)
T ss_pred -----------------------HhhhheeeEEEEeccccEEEecCCCcceeeeecch
Confidence 12235688999999999999965 99999998765
|
|
| >KOG1036|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.8e-26 Score=199.82 Aligned_cols=268 Identities=18% Similarity=0.236 Sum_probs=217.5
Q ss_pred ccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe-CCEEEEEcCCCcEEEEECCC
Q psy12614 22 YAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF-NDRLFSGGLQGFVNEYDMRR 100 (708)
Q Consensus 22 ~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~-~~~l~s~~~d~~i~vwd~~~ 100 (708)
-....+.|+.+.|+|.+..|++++.||++++||+...... ..-.|. .++.+.+|. ...+++|+.||.|+.+|+.+
T Consensus 9 ~npP~d~IS~v~f~~~~~~LLvssWDgslrlYdv~~~~l~--~~~~~~--~plL~c~F~d~~~~~~G~~dg~vr~~Dln~ 84 (323)
T KOG1036|consen 9 ENPPEDGISSVKFSPSSSDLLVSSWDGSLRLYDVPANSLK--LKFKHG--APLLDCAFADESTIVTGGLDGQVRRYDLNT 84 (323)
T ss_pred CCCChhceeeEEEcCcCCcEEEEeccCcEEEEeccchhhh--hheecC--CceeeeeccCCceEEEeccCceEEEEEecC
Confidence 3456789999999999999999999999999999987543 334466 899999999 89999999999999999999
Q ss_pred CeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEE
Q psy12614 101 LNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVR 179 (708)
Q Consensus 101 ~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~ 179 (708)
+... .+..|...|.||.+++....+++|+.|++|++||..+.... ..+. ....|.++..+ |+.|+.|+.+ .+.
T Consensus 85 ~~~~-~igth~~~i~ci~~~~~~~~vIsgsWD~~ik~wD~R~~~~~--~~~d-~~kkVy~~~v~--g~~LvVg~~~r~v~ 158 (323)
T KOG1036|consen 85 GNED-QIGTHDEGIRCIEYSYEVGCVISGSWDKTIKFWDPRNKVVV--GTFD-QGKKVYCMDVS--GNRLVVGTSDRKVL 158 (323)
T ss_pred Ccce-eeccCCCceEEEEeeccCCeEEEcccCccEEEEeccccccc--cccc-cCceEEEEecc--CCEEEEeecCceEE
Confidence 7654 56679999999999998889999999999999999874443 2232 34478888765 7789999999 999
Q ss_pred EEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCC----eeEEEeeccc---------c
Q psy12614 180 VWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTG----VQWSDVKTHK---------K 245 (708)
Q Consensus 180 iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~----~~~~~~~~~~---------~ 245 (708)
+||+++.......... .-...+.|+++.|++. +++++-+|.|.+=.++.. +....+++|. -
T Consensus 159 iyDLRn~~~~~q~reS-----~lkyqtR~v~~~pn~eGy~~sSieGRVavE~~d~s~~~~skkyaFkCHr~~~~~~~~~y 233 (323)
T KOG1036|consen 159 IYDLRNLDEPFQRRES-----SLKYQTRCVALVPNGEGYVVSSIEGRVAVEYFDDSEEAQSKKYAFKCHRLSEKDTEIIY 233 (323)
T ss_pred EEEcccccchhhhccc-----cceeEEEEEEEecCCCceEEEeecceEEEEccCCchHHhhhceeEEeeecccCCceEEE
Confidence 9999987665533322 2367899999999776 999999999998666554 3444566664 3
Q ss_pred CeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEEEcC
Q psy12614 246 DILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSGGL 320 (708)
Q Consensus 246 ~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~~~ 320 (708)
+|.+++|+|-...|++|+.||.|.+||+.+ .+ .+..+......|.+++|+ |..||+++.
T Consensus 234 PVNai~Fhp~~~tfaTgGsDG~V~~Wd~~~--------rK--------rl~q~~~~~~SI~slsfs~dG~~LAia~s 294 (323)
T KOG1036|consen 234 PVNAIAFHPIHGTFATGGSDGIVNIWDLFN--------RK--------RLKQLAKYETSISSLSFSMDGSLLAIASS 294 (323)
T ss_pred EeceeEeccccceEEecCCCceEEEccCcc--------hh--------hhhhccCCCCceEEEEeccCCCeEEEEec
Confidence 789999999999999999999999999998 43 445555556779999999 889988864
|
|
| >KOG0772|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.5e-26 Score=215.70 Aligned_cols=296 Identities=15% Similarity=0.192 Sum_probs=211.2
Q ss_pred EecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCc----eEEEEEecccCCCCCceeEEEEEEccCC-EEEEEcC
Q psy12614 149 KLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGH----AIHKMSLDKSSKFSKNTAVWCVAFCADF-TIITGDS 222 (708)
Q Consensus 149 ~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~----~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~~~~~ 222 (708)
..+.+|...|.++++.|.|..+++|+.| +|++||..... ..+.+.. .....|.++.|++.| ++++.+.
T Consensus 161 i~l~hgtk~Vsal~~Dp~GaR~~sGs~Dy~v~~wDf~gMdas~~~fr~l~P------~E~h~i~sl~ys~Tg~~iLvvsg 234 (641)
T KOG0772|consen 161 IQLKHGTKIVSALAVDPSGARFVSGSLDYTVKFWDFQGMDASMRSFRQLQP------CETHQINSLQYSVTGDQILVVSG 234 (641)
T ss_pred EeccCCceEEEEeeecCCCceeeeccccceEEEEecccccccchhhhccCc------ccccccceeeecCCCCeEEEEec
Confidence 4677888999999999999999999999 99999987432 2222222 226779999999988 5888888
Q ss_pred CCcEEEEeCCCCeeEEE-------------eeccccCeEEEEEeCCC-CEEEEEecCCeEEEEEccCCcccccCCCCCCC
Q psy12614 223 GGFVRFWDGKTGVQWSD-------------VKTHKKDILALTVSEDE-NYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQG 288 (708)
Q Consensus 223 dg~i~~wd~~~~~~~~~-------------~~~~~~~i~~~~~s~~~-~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~ 288 (708)
....+++|-. |..+.. .++|...++|.+|.|+. ..+++++.||++++|++.. .+ .
T Consensus 235 ~aqakl~DRd-G~~~~e~~KGDQYI~Dm~nTKGHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~--------~k--~ 303 (641)
T KOG0772|consen 235 SAQAKLLDRD-GFEIVEFSKGDQYIRDMYNTKGHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNN--------TK--S 303 (641)
T ss_pred CcceeEEccC-CceeeeeeccchhhhhhhccCCceeeeeccccccCcccceEEecCCCcEEEEecCC--------ch--h
Confidence 8899999954 433322 26899999999999976 5788999999999999988 32 1
Q ss_pred CcceEEeEEEeccccceEEEEEe--CCEEEEEcCCCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEEEcCCeEEE
Q psy12614 289 SSVWVRSVNRVIHEGDVKSLALH--GNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLEL 366 (708)
Q Consensus 289 ~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~i 366 (708)
..+.+......+..-+++.++|+ +.++++|+.||.|.+|+......+
T Consensus 304 q~qVik~k~~~g~Rv~~tsC~~nrdg~~iAagc~DGSIQ~W~~~~~~v~------------------------------- 352 (641)
T KOG0772|consen 304 QLQVIKTKPAGGKRVPVTSCAWNRDGKLIAAGCLDGSIQIWDKGSRTVR------------------------------- 352 (641)
T ss_pred heeEEeeccCCCcccCceeeecCCCcchhhhcccCCceeeeecCCcccc-------------------------------
Confidence 11222222223333445666666 666666666666666665322111
Q ss_pred EEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCC--ceEEEEeCCCCcEEEE-EcCCceEEEEEEecCCcceeEEe
Q psy12614 367 WSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNA--TIRCSVVSNDGKYVAY-STESCVRLHSLDLDGDKPQISRI 443 (708)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~i~~~~~s~~g~~l~~-~~d~~i~i~~~~~~~~~~~~~~~ 443 (708)
....+...|.. .|+|++||+||++|++ |.|+++++||+...+..+...
T Consensus 353 ---------------------------p~~~vk~AH~~g~~Itsi~FS~dg~~LlSRg~D~tLKvWDLrq~kkpL~~~-- 403 (641)
T KOG0772|consen 353 ---------------------------PVMKVKDAHLPGQDITSISFSYDGNYLLSRGFDDTLKVWDLRQFKKPLNVR-- 403 (641)
T ss_pred ---------------------------cceEeeeccCCCCceeEEEeccccchhhhccCCCceeeeeccccccchhhh--
Confidence 12233345555 8999999999999999 779999999999744332211
Q ss_pred ecCCcccccceeEEEEEecCCCeEEEEecCCc------EEEecCCCeEEEEEecCCCCCccCcceEEEEECCCCcEEEEE
Q psy12614 444 KNLPAPLFKSIFTHVLISADSTLLLAVSLNGP------LYIIDLSSLEIKYCVDPYKSNLMSDVISLVQMSECKQYIVCA 517 (708)
Q Consensus 444 ~~~~~~~~~~~i~~~~~s~d~~~l~~~~~dg~------i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~ 517 (708)
.-++. ...-+.++|||+.+++++|+.--. ++-++..+.+.++.+... ...|..+.|+|.-+.+.++
T Consensus 404 tgL~t---~~~~tdc~FSPd~kli~TGtS~~~~~~~g~L~f~d~~t~d~v~ki~i~-----~aSvv~~~WhpkLNQi~~g 475 (641)
T KOG0772|consen 404 TGLPT---PFPGTDCCFSPDDKLILTGTSAPNGMTAGTLFFFDRMTLDTVYKIDIS-----TASVVRCLWHPKLNQIFAG 475 (641)
T ss_pred cCCCc---cCCCCccccCCCceEEEecccccCCCCCceEEEEeccceeeEEEecCC-----CceEEEEeecchhhheeee
Confidence 11232 233455899999999999875322 777777777777777654 4468889999998999999
Q ss_pred ecCCeEEEEECC
Q psy12614 518 DRKSHVVIWKNG 529 (708)
Q Consensus 518 ~~d~~i~iw~~~ 529 (708)
+.||+++||--.
T Consensus 476 sgdG~~~vyYdp 487 (641)
T KOG0772|consen 476 SGDGTAHVYYDP 487 (641)
T ss_pred cCCCceEEEECc
Confidence 999999987544
|
|
| >KOG0300|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.4e-27 Score=204.31 Aligned_cols=322 Identities=11% Similarity=0.111 Sum_probs=245.7
Q ss_pred EEEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEE
Q psy12614 62 DRVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQ 139 (708)
Q Consensus 62 ~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd 139 (708)
.+.+.||+ ..|..++-. ...+.+++.|.+.+||.+++|+|+.++.+|.+.|+++.|++.+.++++++.|++..||.
T Consensus 141 vre~~GHk--DGiW~Vaa~~tqpi~gtASADhTA~iWs~Esg~CL~~Y~GH~GSVNsikfh~s~~L~lTaSGD~taHIW~ 218 (481)
T KOG0300|consen 141 VRELEGHK--DGIWHVAADSTQPICGTASADHTARIWSLESGACLATYTGHTGSVNSIKFHNSGLLLLTASGDETAHIWK 218 (481)
T ss_pred hhhhcccc--cceeeehhhcCCcceeecccccceeEEeeccccceeeecccccceeeEEeccccceEEEccCCcchHHHH
Confidence 34789999 999999988 67888999999999999999999999999999999999999999999999999999997
Q ss_pred ccCCcEEEE-EecccccccEEEEEECCCCCEEEEe--cCC--eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccC
Q psy12614 140 ISDEGLLYE-KLLDRQQGRILCTAWHSSGDYLVTG--CAA--AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCAD 214 (708)
Q Consensus 140 ~~~~~~~~~-~~~~~~~~~v~~~~~s~d~~~l~~~--~~d--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 214 (708)
..-.-.+.. ....+|.+. ..+.-+........+ ..| +|++ ++..+. +|...|.+..|...
T Consensus 219 ~av~~~vP~~~a~~~hSsE-eE~e~sDe~~~d~d~~~~sD~~tiRv-------Pl~~lt-------gH~~vV~a~dWL~g 283 (481)
T KOG0300|consen 219 AAVNWEVPSNNAPSDHSSE-EEEEHSDEHNRDTDSSEKSDGHTIRV-------PLMRLT-------GHRAVVSACDWLAG 283 (481)
T ss_pred HhhcCcCCCCCCCCCCCch-hhhhcccccccccccccccCCceeee-------eeeeee-------ccccceEehhhhcC
Confidence 432111100 011122110 000011000111111 111 3332 233343 44888999999988
Q ss_pred C-EEEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceE
Q psy12614 215 F-TIITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWV 293 (708)
Q Consensus 215 ~-~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~ 293 (708)
| ++++++.|.+..+||+++|+.+..+.+|....+.++-.|..+++++++.|.+.++||++. . ..
T Consensus 284 g~Q~vTaSWDRTAnlwDVEtge~v~~LtGHd~ELtHcstHptQrLVvTsSrDtTFRLWDFRe--------a-------I~ 348 (481)
T KOG0300|consen 284 GQQMVTASWDRTANLWDVETGEVVNILTGHDSELTHCSTHPTQRLVVTSSRDTTFRLWDFRE--------A-------IQ 348 (481)
T ss_pred cceeeeeeccccceeeeeccCceeccccCcchhccccccCCcceEEEEeccCceeEeccchh--------h-------cc
Confidence 8 499999999999999999999999999999999999999999999999999999999987 2 12
Q ss_pred EeEEEeccccceEEEEEe-CCEEEEEcCCCeEEEEeCCCCc--eeecCccCCCCceEEEEcCCcEEEEE-cCCeEEEEEe
Q psy12614 294 RSVNRVIHEGDVKSLALH-GNRLYSGGLDSYLSLSYYPPKT--LVKYPCTLAQSTPVSLAKDIQHVLLQ-YTSHLELWSL 369 (708)
Q Consensus 294 ~~~~~~~~~~~v~~l~~~-~~~l~s~~~d~~i~iw~~~~~~--~~~~~~~~~~~~~~~~s~~~~~l~~~-~~~~i~i~~~ 369 (708)
....+.+|...|++..|. +..+++|+.|.+|++||+.+.. +..+. .......++++..+.+++.- .+..+++||+
T Consensus 349 sV~VFQGHtdtVTS~vF~~dd~vVSgSDDrTvKvWdLrNMRsplATIR-tdS~~NRvavs~g~~iIAiPhDNRqvRlfDl 427 (481)
T KOG0300|consen 349 SVAVFQGHTDTVTSVVFNTDDRVVSGSDDRTVKVWDLRNMRSPLATIR-TDSPANRVAVSKGHPIIAIPHDNRQVRLFDL 427 (481)
T ss_pred eeeeecccccceeEEEEecCCceeecCCCceEEEeeeccccCcceeee-cCCccceeEeecCCceEEeccCCceEEEEec
Confidence 467789999999999999 9999999999999999998865 44444 44556778999999999986 5567999999
Q ss_pred cCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCC---cEEEEEcCCceEEEEEEe
Q psy12614 370 GSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDG---KYVAYSTESCVRLHSLDL 433 (708)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g---~~l~~~~d~~i~i~~~~~ 433 (708)
..... +........+|...|+|++|..+. .++.+|-|..+.-|.+..
T Consensus 428 nG~Rl-----------------aRlPrtsRqgHrRMV~c~AW~eehp~cnLftcGFDR~v~gW~in~ 477 (481)
T KOG0300|consen 428 NGNRL-----------------ARLPRTSRQGHRRMVTCCAWLEEHPACNLFTCGFDRMVAGWKINT 477 (481)
T ss_pred CCCcc-----------------ccCCcccccccceeeeeeeccccCcccccccccccceeeeeEecc
Confidence 87551 111122334788889999997543 445557799999998875
|
|
| >PTZ00420 coronin; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.3e-25 Score=225.89 Aligned_cols=224 Identities=13% Similarity=0.173 Sum_probs=174.1
Q ss_pred EeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe---CCEEEEEcCCCcEEEEECCCCe--------EeEEEeecCC
Q psy12614 44 SRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF---NDRLFSGGLQGFVNEYDMRRLN--------IKSSTAVTSG 112 (708)
Q Consensus 44 ~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~---~~~l~s~~~d~~i~vwd~~~~~--------~~~~~~~~~~ 112 (708)
|+.++.|++|+......+. .+.+|. +.|.+++|+ +++|++|+.|++|++||+.++. ++..+.+|..
T Consensus 50 GG~~gvI~L~~~~r~~~v~-~L~gH~--~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~ 126 (568)
T PTZ00420 50 GGLIGAIRLENQMRKPPVI-KLKGHT--SSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKK 126 (568)
T ss_pred CCceeEEEeeecCCCceEE-EEcCCC--CCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccceEEeecCCC
Confidence 4567889999998766554 899999 999999999 5799999999999999998642 3456789999
Q ss_pred ceEEEEEecCCCE-EEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEE
Q psy12614 113 TCWCLSVHKKKRL-LAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIH 190 (708)
Q Consensus 113 ~v~~~~~s~~~~~-la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~ 190 (708)
.|.+++|+|++.. |++++.|+.|++||+.+++.. ..+. |...|.+++|+|+|.+|++++.| .|++||+++++.+.
T Consensus 127 ~V~sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~~~--~~i~-~~~~V~SlswspdG~lLat~s~D~~IrIwD~Rsg~~i~ 203 (568)
T PTZ00420 127 KISIIDWNPMNYYIMCSSGFDSFVNIWDIENEKRA--FQIN-MPKKLSSLKWNIKGNLLSGTCVGKHMHIIDPRKQEIAS 203 (568)
T ss_pred cEEEEEECCCCCeEEEEEeCCCeEEEEECCCCcEE--EEEe-cCCcEEEEEECCCCCEEEEEecCCEEEEEECCCCcEEE
Confidence 9999999999875 578899999999999998865 3343 56789999999999999999999 99999999999888
Q ss_pred EEEecccCCCCCceeEEEEEEccCC-EEEEEcCCC----cEEEEeCCC-CeeEEEeec--cccCeEEEEEeCCCCEEEEE
Q psy12614 191 KMSLDKSSKFSKNTAVWCVAFCADF-TIITGDSGG----FVRFWDGKT-GVQWSDVKT--HKKDILALTVSEDENYLYCA 262 (708)
Q Consensus 191 ~~~~~~~~~~~~~~~v~~~~~~~~~-~l~~~~~dg----~i~~wd~~~-~~~~~~~~~--~~~~i~~~~~s~~~~~l~~~ 262 (708)
.+..+.... ....++...|++++ .+++++.++ +|++||+++ ++++..+.. +.+.+......+++.++++|
T Consensus 204 tl~gH~g~~--~s~~v~~~~fs~d~~~IlTtG~d~~~~R~VkLWDlr~~~~pl~~~~ld~~~~~L~p~~D~~tg~l~lsG 281 (568)
T PTZ00420 204 SFHIHDGGK--NTKNIWIDGLGGDDNYILSTGFSKNNMREMKLWDLKNTTSALVTMSIDNASAPLIPHYDESTGLIYLIG 281 (568)
T ss_pred EEecccCCc--eeEEEEeeeEcCCCCEEEEEEcCCCCccEEEEEECCCCCCceEEEEecCCccceEEeeeCCCCCEEEEE
Confidence 775432000 01223344566777 477777664 799999985 555555432 23333334445568889999
Q ss_pred ecCCeEEEEEccC
Q psy12614 263 GVDPTVVCFQRTR 275 (708)
Q Consensus 263 ~~dg~i~iw~~~~ 275 (708)
..|+.|++|++..
T Consensus 282 kGD~tIr~~e~~~ 294 (568)
T PTZ00420 282 KGDGNCRYYQHSL 294 (568)
T ss_pred ECCCeEEEEEccC
Confidence 9999999999987
|
|
| >KOG0288|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.8e-27 Score=215.87 Aligned_cols=198 Identities=17% Similarity=0.280 Sum_probs=177.1
Q ss_pred EEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECCCCe--EeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEE
Q psy12614 64 VFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMRRLN--IKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQ 139 (708)
Q Consensus 64 ~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~~--~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd 139 (708)
.+..|. +.+..+.|- .+.|++++.|..|++|++..++ .+.++.+..+.|+++.|.++++++++++.|+.+++|+
T Consensus 170 ~ld~h~--gev~~v~~l~~sdtlatgg~Dr~Ik~W~v~~~k~~~~~tLaGs~g~it~~d~d~~~~~~iAas~d~~~r~Wn 247 (459)
T KOG0288|consen 170 VLDAHE--GEVHDVEFLRNSDTLATGGSDRIIKLWNVLGEKSELISTLAGSLGNITSIDFDSDNKHVIAASNDKNLRLWN 247 (459)
T ss_pred hhhccc--cccceeEEccCcchhhhcchhhhhhhhhcccchhhhhhhhhccCCCcceeeecCCCceEEeecCCCceeeee
Confidence 677888 999999999 5899999999999999998877 6778888899999999999999999999999999999
Q ss_pred ccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEE
Q psy12614 140 ISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTII 218 (708)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~ 218 (708)
+...+.. .++.+|.+.|+++.|......+++++.| +|+.||+....+.+++... ..+..|+.+ ...++
T Consensus 248 vd~~r~~--~TLsGHtdkVt~ak~~~~~~~vVsgs~DRtiK~WDl~k~~C~kt~l~~--------S~cnDI~~~-~~~~~ 316 (459)
T KOG0288|consen 248 VDSLRLR--HTLSGHTDKVTAAKFKLSHSRVVSGSADRTIKLWDLQKAYCSKTVLPG--------SQCNDIVCS-ISDVI 316 (459)
T ss_pred ccchhhh--hhhcccccceeeehhhccccceeeccccchhhhhhhhhhheecccccc--------ccccceEec-ceeee
Confidence 9998887 8899999999999999888779999999 9999999998888877653 344555554 22488
Q ss_pred EEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccC
Q psy12614 219 TGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTR 275 (708)
Q Consensus 219 ~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~ 275 (708)
+|..|+.|++||.++..+....+.+. .|+++..++++..|.+.+.|.++.+.|+++
T Consensus 317 SgH~DkkvRfwD~Rs~~~~~sv~~gg-~vtSl~ls~~g~~lLsssRDdtl~viDlRt 372 (459)
T KOG0288|consen 317 SGHFDKKVRFWDIRSADKTRSVPLGG-RVTSLDLSMDGLELLSSSRDDTLKVIDLRT 372 (459)
T ss_pred ecccccceEEEeccCCceeeEeecCc-ceeeEeeccCCeEEeeecCCCceeeeeccc
Confidence 99999999999999999999998664 999999999999999999999999999998
|
|
| >KOG2096|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-25 Score=197.35 Aligned_cols=295 Identities=13% Similarity=0.111 Sum_probs=217.4
Q ss_pred EeEEEeccccceEEEEEe--CCEEEEEcCCCeEEEEeCCCCceee-----cCccCCCCceEEEEcCCcEEEEE--cCCeE
Q psy12614 294 RSVNRVIHEGDVKSLALH--GNRLYSGGLDSYLSLSYYPPKTLVK-----YPCTLAQSTPVSLAKDIQHVLLQ--YTSHL 364 (708)
Q Consensus 294 ~~~~~~~~~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~~~~~~-----~~~~~~~~~~~~~s~~~~~l~~~--~~~~i 364 (708)
....+.+|...|++++|+ |..|++++.|+.|++|+++....+. ..-+..+++.+.|+||-+-++++ ..+.+
T Consensus 78 ~~~~LKgH~~~vt~~~FsSdGK~lat~~~Dr~Ir~w~~~DF~~~eHr~~R~nve~dhpT~V~FapDc~s~vv~~~~g~~l 157 (420)
T KOG2096|consen 78 NVSVLKGHKKEVTDVAFSSDGKKLATISGDRSIRLWDVRDFENKEHRCIRQNVEYDHPTRVVFAPDCKSVVVSVKRGNKL 157 (420)
T ss_pred hhhhhhccCCceeeeEEcCCCceeEEEeCCceEEEEecchhhhhhhhHhhccccCCCceEEEECCCcceEEEEEccCCEE
Confidence 345688999999999999 9999999999999999998765222 12256688899999998877764 77789
Q ss_pred EEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEEEc-CCceEEEEEEecCCcceeEEe
Q psy12614 365 ELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYST-ESCVRLHSLDLDGDKPQISRI 443 (708)
Q Consensus 365 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~-d~~i~i~~~~~~~~~~~~~~~ 443 (708)
++|.+...+ .|.-.-.. .+..-.++...|.-.+..+-+...+++|++++ |..|.+|++.. + .+..+
T Consensus 158 ~vyk~~K~~----dG~~~~~~-----v~~D~~~f~~kh~v~~i~iGiA~~~k~imsas~dt~i~lw~lkG---q-~L~~i 224 (420)
T KOG2096|consen 158 CVYKLVKKT----DGSGSHHF-----VHIDNLEFERKHQVDIINIGIAGNAKYIMSASLDTKICLWDLKG---Q-LLQSI 224 (420)
T ss_pred EEEEeeecc----cCCCCccc-----ccccccccchhcccceEEEeecCCceEEEEecCCCcEEEEecCC---c-eeeee
Confidence 999887644 11111111 11222334456677777888888999999854 99999999982 2 23332
Q ss_pred ecCCcccccceeEEEEEecCCCeEEEEecCCc--EEEec---CCCeEEEEEecCCCCCccCcceEEEEECCCCcEEEEEe
Q psy12614 444 KNLPAPLFKSIFTHVLISADSTLLLAVSLNGP--LYIID---LSSLEIKYCVDPYKSNLMSDVISLVQMSECKQYIVCAD 518 (708)
Q Consensus 444 ~~~~~~~~~~~i~~~~~s~d~~~l~~~~~dg~--i~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~ 518 (708)
. .. ...-...+.||+|+++|+++..-. +|.+- .++.+.+...-..+|| ...|..++||++.+.+++.+
T Consensus 225 d---tn--q~~n~~aavSP~GRFia~~gFTpDVkVwE~~f~kdG~fqev~rvf~LkGH--~saV~~~aFsn~S~r~vtvS 297 (420)
T KOG2096|consen 225 D---TN--QSSNYDAAVSPDGRFIAVSGFTPDVKVWEPIFTKDGTFQEVKRVFSLKGH--QSAVLAAAFSNSSTRAVTVS 297 (420)
T ss_pred c---cc--cccccceeeCCCCcEEEEecCCCCceEEEEEeccCcchhhhhhhheeccc--hhheeeeeeCCCcceeEEEe
Confidence 1 11 122333799999999998876555 88773 3444555555567788 99999999999999999999
Q ss_pred cCCeEEEEECC-ce--------e----eecCCCCCCceEEEEcCCCCEEEEEecCCcEEEEEcCCCCCCchhhhhhccCc
Q psy12614 519 RKSHVVIWKNG-QH--------H----ASLPRYRKPSTAMAIHPTLSTLVTVYSDHRIVEFDLNRKAFTTFSRKLETNHP 585 (708)
Q Consensus 519 ~d~~i~iw~~~-~~--------~----~~~~~~~~~v~~l~~s~d~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~ 585 (708)
.||+++|||++ +. . ..+..-.+....++++|+|+.||.+. ...+++|..++++..+
T Consensus 298 kDG~wriwdtdVrY~~~qDpk~Lk~g~~pl~aag~~p~RL~lsP~g~~lA~s~-gs~l~~~~se~g~~~~---------- 366 (420)
T KOG2096|consen 298 KDGKWRIWDTDVRYEAGQDPKILKEGSAPLHAAGSEPVRLELSPSGDSLAVSF-GSDLKVFASEDGKDYP---------- 366 (420)
T ss_pred cCCcEEEeeccceEecCCCchHhhcCCcchhhcCCCceEEEeCCCCcEEEeec-CCceEEEEcccCccch----------
Confidence 99999999998 11 1 12223345666899999999998654 4569999999987551
Q ss_pred hhhhcCCCCeeEEEeCCCCCceEEEEcCeeEEEEe
Q psy12614 586 NEWLSRQLPVLGIEFDPQDSSLIYLMDDSALCVIN 620 (708)
Q Consensus 586 ~~~~~~~~~i~~l~~s~~~~~l~~~~~d~~i~~wd 620 (708)
..-..|...|.+++|+++|+++++++ |..++++.
T Consensus 367 ~~e~~h~~~Is~is~~~~g~~~atcG-dr~vrv~~ 400 (420)
T KOG2096|consen 367 ELEDIHSTTISSISYSSDGKYIATCG-DRYVRVIR 400 (420)
T ss_pred hHHHhhcCceeeEEecCCCcEEeeec-ceeeeeec
Confidence 22345999999999999999999987 67777774
|
|
| >KOG0301|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=4e-26 Score=220.64 Aligned_cols=279 Identities=16% Similarity=0.236 Sum_probs=238.8
Q ss_pred eEEEEEecCCCCCcEEEEEEe-CCEEEEEcCCCcEEEEECCCCeEe--EEEeecCCceEE-EEEec-CCCEEEEEeCCCc
Q psy12614 60 HVDRVFIGDPLSNSIECLTWF-NDRLFSGGLQGFVNEYDMRRLNIK--SSTAVTSGTCWC-LSVHK-KKRLLAAGTEQGH 134 (708)
Q Consensus 60 ~~~~~~~~h~~~~~v~~l~~~-~~~l~s~~~d~~i~vwd~~~~~~~--~~~~~~~~~v~~-~~~s~-~~~~la~~~~d~~ 134 (708)
.+.+.+.||. ..|..+++. +-.+++++.||++++|+-..++.+ ..+.+|.+.|.. +++-+ ++-.+++|+.|..
T Consensus 5 ~ls~~l~gH~--~DVr~v~~~~~~~i~s~sRd~t~~vw~~~~~~~l~~~~~~~~~g~i~~~i~y~e~~~~~l~~g~~D~~ 82 (745)
T KOG0301|consen 5 KLSHELEGHK--SDVRAVAVTDGVCIISGSRDGTVKVWAKKGKQYLETHAFEGPKGFIANSICYAESDKGRLVVGGMDTT 82 (745)
T ss_pred eeEEEeccCc--cchheeEecCCeEEeecCCCCceeeeeccCcccccceecccCcceeeccceeccccCcceEeecccce
Confidence 4556899999 999999998 778999999999999997666544 456678888877 88876 5556999999999
Q ss_pred EEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEcc
Q psy12614 135 INLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCA 213 (708)
Q Consensus 135 i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 213 (708)
|.+|...+.+.. ..+.+|+..|.++....++. +++|+.| ++++|.. +++...+. +|...|++++..|
T Consensus 83 i~v~~~~~~~P~--~~LkgH~snVC~ls~~~~~~-~iSgSWD~TakvW~~--~~l~~~l~-------gH~asVWAv~~l~ 150 (745)
T KOG0301|consen 83 IIVFKLSQAEPL--YTLKGHKSNVCSLSIGEDGT-LISGSWDSTAKVWRI--GELVYSLQ-------GHTASVWAVASLP 150 (745)
T ss_pred EEEEecCCCCch--hhhhccccceeeeecCCcCc-eEecccccceEEecc--hhhhcccC-------CcchheeeeeecC
Confidence 999999998887 78999999999999888887 9999999 9999985 44444443 5599999999999
Q ss_pred CCEEEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceE
Q psy12614 214 DFTIITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWV 293 (708)
Q Consensus 214 ~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~ 293 (708)
++.+++|+.|.+|++|.- ++.++++.+|.+.|+.+++-+++ .+++++.||.|+.|++.. +
T Consensus 151 e~~~vTgsaDKtIklWk~--~~~l~tf~gHtD~VRgL~vl~~~-~flScsNDg~Ir~w~~~g---------e-------- 210 (745)
T KOG0301|consen 151 ENTYVTGSADKTIKLWKG--GTLLKTFSGHTDCVRGLAVLDDS-HFLSCSNDGSIRLWDLDG---------E-------- 210 (745)
T ss_pred CCcEEeccCcceeeeccC--CchhhhhccchhheeeeEEecCC-CeEeecCCceEEEEeccC---------c--------
Confidence 999999999999999985 88999999999999999999886 578999999999999954 3
Q ss_pred EeEEEeccccceEEEEEe--CCEEEEEcCCCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEEEcCCeEEEEEecC
Q psy12614 294 RSVNRVIHEGDVKSLALH--GNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSLGS 371 (708)
Q Consensus 294 ~~~~~~~~~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~ 371 (708)
.+..+.+|+.-|.+++.. +..+++++.|+++++|+.. .....+.-|.....++.+-++|.+++.++||.|++|....
T Consensus 211 ~l~~~~ghtn~vYsis~~~~~~~Ivs~gEDrtlriW~~~-e~~q~I~lPttsiWsa~~L~NgDIvvg~SDG~VrVfT~~k 289 (745)
T KOG0301|consen 211 VLLEMHGHTNFVYSISMALSDGLIVSTGEDRTLRIWKKD-ECVQVITLPTTSIWSAKVLLNGDIVVGGSDGRVRVFTVDK 289 (745)
T ss_pred eeeeeeccceEEEEEEecCCCCeEEEecCCceEEEeecC-ceEEEEecCccceEEEEEeeCCCEEEeccCceEEEEEecc
Confidence 688889999999999954 8999999999999999987 2233333345567788888999999999999999999875
Q ss_pred CC
Q psy12614 372 AQ 373 (708)
Q Consensus 372 ~~ 373 (708)
..
T Consensus 290 ~R 291 (745)
T KOG0301|consen 290 DR 291 (745)
T ss_pred cc
Confidence 44
|
|
| >KOG0289|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.3e-26 Score=207.06 Aligned_cols=274 Identities=18% Similarity=0.226 Sum_probs=232.9
Q ss_pred CcEEEEEEe--CCEEEEEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEE
Q psy12614 72 NSIECLTWF--NDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEK 149 (708)
Q Consensus 72 ~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~ 149 (708)
..+.++... .+.+++|+.|..+.++|...++.+..+.+|...|+.+.|+|+...+++++.|..|++|........ .
T Consensus 220 pgi~ald~~~s~~~ilTGG~d~~av~~d~~s~q~l~~~~Gh~kki~~v~~~~~~~~v~~aSad~~i~vws~~~~s~~--~ 297 (506)
T KOG0289|consen 220 PGITALDIIPSSSKILTGGEDKTAVLFDKPSNQILATLKGHTKKITSVKFHKDLDTVITASADEIIRVWSVPLSSEP--T 297 (506)
T ss_pred CCeeEEeecCCCCcceecCCCCceEEEecchhhhhhhccCcceEEEEEEeccchhheeecCCcceEEeeccccccCc--c
Confidence 357777777 489999999999999999999999999999999999999999999999999999999998876654 6
Q ss_pred ecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEE
Q psy12614 150 LLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVR 227 (708)
Q Consensus 150 ~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~ 227 (708)
....|+++|+.+..+|.|.||++++.| +..+.|+++|..+...... ...-.+++.+|+|||. |.+|..||.|+
T Consensus 298 ~~~~h~~~V~~ls~h~tgeYllsAs~d~~w~Fsd~~~g~~lt~vs~~-----~s~v~~ts~~fHpDgLifgtgt~d~~vk 372 (506)
T KOG0289|consen 298 SSRPHEEPVTGLSLHPTGEYLLSASNDGTWAFSDISSGSQLTVVSDE-----TSDVEYTSAAFHPDGLIFGTGTPDGVVK 372 (506)
T ss_pred ccccccccceeeeeccCCcEEEEecCCceEEEEEccCCcEEEEEeec-----cccceeEEeeEcCCceEEeccCCCceEE
Confidence 788999999999999999999999999 9999999999998887653 1256799999999997 78999999999
Q ss_pred EEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEec-cccceE
Q psy12614 228 FWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVI-HEGDVK 306 (708)
Q Consensus 228 ~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~v~ 306 (708)
+||+.++..+..+.+|.++|..++|+.+|-+|++++.|+.|++||++. -+ ....+.. ....+.
T Consensus 373 iwdlks~~~~a~Fpght~~vk~i~FsENGY~Lat~add~~V~lwDLRK--------l~--------n~kt~~l~~~~~v~ 436 (506)
T KOG0289|consen 373 IWDLKSQTNVAKFPGHTGPVKAISFSENGYWLATAADDGSVKLWDLRK--------LK--------NFKTIQLDEKKEVN 436 (506)
T ss_pred EEEcCCccccccCCCCCCceeEEEeccCceEEEEEecCCeEEEEEehh--------hc--------ccceeeccccccce
Confidence 999999999999999999999999999999999999999999999987 32 1222222 123689
Q ss_pred EEEEe--CCEEEEEcCCCeEEEEeCCCCcee---ecCccCCCCceEEEEcCCcEEEEE-cCCeEEEEE
Q psy12614 307 SLALH--GNRLYSGGLDSYLSLSYYPPKTLV---KYPCTLAQSTPVSLAKDIQHVLLQ-YTSHLELWS 368 (708)
Q Consensus 307 ~l~~~--~~~l~s~~~d~~i~iw~~~~~~~~---~~~~~~~~~~~~~~s~~~~~l~~~-~~~~i~i~~ 368 (708)
++.|. |.+|+.++.|=+|.+++-.+.... .+..+......+.|....++++.+ .+..++++.
T Consensus 437 s~~fD~SGt~L~~~g~~l~Vy~~~k~~k~W~~~~~~~~~sg~st~v~Fg~~aq~l~s~smd~~l~~~a 504 (506)
T KOG0289|consen 437 SLSFDQSGTYLGIAGSDLQVYICKKKTKSWTEIKELADHSGLSTGVRFGEHAQYLASTSMDAILRLYA 504 (506)
T ss_pred eEEEcCCCCeEEeecceeEEEEEecccccceeeehhhhcccccceeeecccceEEeeccchhheEEee
Confidence 99998 999999988888888876665533 333344566788999999999885 555566654
|
|
| >KOG0283|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.1e-26 Score=227.68 Aligned_cols=247 Identities=18% Similarity=0.260 Sum_probs=195.9
Q ss_pred EeEEEe-ecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCc-------------------------------------
Q psy12614 103 IKSSTA-VTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEG------------------------------------- 144 (708)
Q Consensus 103 ~~~~~~-~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~------------------------------------- 144 (708)
..+.+. .|.+.|++|.||+||+|||+|+.|+.|+||.+...+
T Consensus 258 ~~Qe~~~ah~gaIw~mKFS~DGKyLAsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~s 337 (712)
T KOG0283|consen 258 VVQEISNAHKGAIWAMKFSHDGKYLASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRTS 337 (712)
T ss_pred EeeccccccCCcEEEEEeCCCCceeeecCCCceEEEEEEeccchhcccccccchhhhhhhhccccCcccccccccccccc
Confidence 344556 899999999999999999999999999999986500
Q ss_pred ---------------------EEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCC
Q psy12614 145 ---------------------LLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSK 202 (708)
Q Consensus 145 ---------------------~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~ 202 (708)
......+.+|.+.|..+.||.++ +|++++.| +|++|++...+++..+ .|
T Consensus 338 ~~~~~~~s~~~~~p~~~f~f~ekP~~ef~GHt~DILDlSWSKn~-fLLSSSMDKTVRLWh~~~~~CL~~F--------~H 408 (712)
T KOG0283|consen 338 SSRKGSQSPCVLLPLKAFVFSEKPFCEFKGHTADILDLSWSKNN-FLLSSSMDKTVRLWHPGRKECLKVF--------SH 408 (712)
T ss_pred ccccccCCccccCCCccccccccchhhhhccchhheecccccCC-eeEeccccccEEeecCCCcceeeEE--------ec
Confidence 00113456899999999999655 89999999 9999999999999888 45
Q ss_pred ceeEEEEEEccCC--EEEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccc
Q psy12614 203 NTAVWCVAFCADF--TIITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVC 280 (708)
Q Consensus 203 ~~~v~~~~~~~~~--~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~ 280 (708)
...|+|++|+|-. .+++|+-||.+++|++...+.+.-.. ...-|++++|.|||+..++|+.+|..++|+...
T Consensus 409 ndfVTcVaFnPvDDryFiSGSLD~KvRiWsI~d~~Vv~W~D-l~~lITAvcy~PdGk~avIGt~~G~C~fY~t~~----- 482 (712)
T KOG0283|consen 409 NDFVTCVAFNPVDDRYFISGSLDGKVRLWSISDKKVVDWND-LRDLITAVCYSPDGKGAVIGTFNGYCRFYDTEG----- 482 (712)
T ss_pred CCeeEEEEecccCCCcEeecccccceEEeecCcCeeEeehh-hhhhheeEEeccCCceEEEEEeccEEEEEEccC-----
Confidence 8999999999944 49999999999999998777665555 448899999999999999999999999999987
Q ss_pred cCCCCCCCCcceEEeEEEecc------ccceEEEEEe---CCEEEEEcCCCeEEEEeCCCCc-eeecCc--cCCCCceEE
Q psy12614 281 STSGPEQGSSVWVRSVNRVIH------EGDVKSLALH---GNRLYSGGLDSYLSLSYYPPKT-LVKYPC--TLAQSTPVS 348 (708)
Q Consensus 281 ~~~g~~~~~~~~~~~~~~~~~------~~~v~~l~~~---~~~l~s~~~d~~i~iw~~~~~~-~~~~~~--~~~~~~~~~ 348 (708)
-+ +........| ...|+++.|. .+.+++.+.|..|||+|..... +.++.+ .........
T Consensus 483 ---lk------~~~~~~I~~~~~Kk~~~~rITG~Q~~p~~~~~vLVTSnDSrIRI~d~~~~~lv~KfKG~~n~~SQ~~As 553 (712)
T KOG0283|consen 483 ---LK------LVSDFHIRLHNKKKKQGKRITGLQFFPGDPDEVLVTSNDSRIRIYDGRDKDLVHKFKGFRNTSSQISAS 553 (712)
T ss_pred ---Ce------EEEeeeEeeccCccccCceeeeeEecCCCCCeEEEecCCCceEEEeccchhhhhhhcccccCCcceeee
Confidence 21 1111112122 2379999998 4458888999999999997665 333332 233445688
Q ss_pred EEcCCcEEEEE-cCCeEEEEEecCCC
Q psy12614 349 LAKDIQHVLLQ-YTSHLELWSLGSAQ 373 (708)
Q Consensus 349 ~s~~~~~l~~~-~~~~i~i~~~~~~~ 373 (708)
|+.||++|+++ .|..|++|++....
T Consensus 554 fs~Dgk~IVs~seDs~VYiW~~~~~~ 579 (712)
T KOG0283|consen 554 FSSDGKHIVSASEDSWVYIWKNDSFN 579 (712)
T ss_pred EccCCCEEEEeecCceEEEEeCCCCc
Confidence 99999999985 78899999987643
|
|
| >KOG1963|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.1e-23 Score=208.27 Aligned_cols=498 Identities=11% Similarity=0.129 Sum_probs=329.0
Q ss_pred ccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe---C--CEEEEEcCCCcEEEE
Q psy12614 22 YAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF---N--DRLFSGGLQGFVNEY 96 (708)
Q Consensus 22 ~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~---~--~~l~s~~~d~~i~vw 96 (708)
+.|....-..-.||+|+++++....+ .|.||...++.++. .+.+|. .++..+.+. . .++++++.||+|++|
T Consensus 12 lgg~n~~~~~avfSnD~k~l~~~~~~-~V~VyS~~Tg~~i~-~l~~~~--a~l~s~~~~~~~~~~~~~~~~sl~G~I~vw 87 (792)
T KOG1963|consen 12 LGGRNGNKSPAVFSNDAKFLFLCTGN-FVKVYSTATGECIT-SLEDHT--APLTSVIVLPSSENANYLIVCSLDGTIRVW 87 (792)
T ss_pred eccccceecccccccCCcEEEEeeCC-EEEEEecchHhhhh-hccccc--CccceeeecCCCccceEEEEEecCccEEEe
Confidence 34444444456799999999988755 99999999999997 999999 999999998 3 578899999999999
Q ss_pred ECCCCeEeEEEeecCCceEEEEEec---CCCEEE-EEeCCC------------cEEEEEccCCcEEEEEecccccccEEE
Q psy12614 97 DMRRLNIKSSTAVTSGTCWCLSVHK---KKRLLA-AGTEQG------------HINLFQISDEGLLYEKLLDRQQGRILC 160 (708)
Q Consensus 97 d~~~~~~~~~~~~~~~~v~~~~~s~---~~~~la-~~~~d~------------~i~iwd~~~~~~~~~~~~~~~~~~v~~ 160 (708)
|...+.+++++..+ .++.++.+.| +...++ ....|. +++-+.+.+-.......+..+.. -.+
T Consensus 88 d~~~~~Llkt~~~~-~~v~~~~~~~~~a~~s~~~~~s~~~~~~~~~~s~~~~~q~~~~~~~t~~~~~~d~~~~~~~-~~~ 165 (792)
T KOG1963|consen 88 DWSDGELLKTFDNN-LPVHALVYKPAQADISANVYVSVEDYSILTTFSKKLSKQSSRFVLATFDSAKGDFLKEHQE-PKS 165 (792)
T ss_pred cCCCcEEEEEEecC-CceeEEEechhHhCccceeEeecccceeeeecccccccceeeeEeeeccccchhhhhhhcC-Ccc
Confidence 99999999988754 3455555433 111122 112221 11111111111000011122222 467
Q ss_pred EEECCCCCEEEEecCCeEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCC--C--e
Q psy12614 161 TAWHSSGDYLVTGCAAAVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKT--G--V 235 (708)
Q Consensus 161 ~~~s~d~~~l~~~~~d~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~--~--~ 235 (708)
+.+++.|.+.+..-...+.+|+..++........... .|...+++.+++|+++ ++++..||.|.+|.--. + .
T Consensus 166 I~~~~~ge~~~i~~~~~~~~~~v~~~~~~~~~~~~~~---~Htf~~t~~~~spn~~~~Aa~d~dGrI~vw~d~~~~~~~~ 242 (792)
T KOG1963|consen 166 IVDNNSGEFKGIVHMCKIHIYFVPKHTKHTSSRDITV---HHTFNITCVALSPNERYLAAGDSDGRILVWRDFGSSDDSE 242 (792)
T ss_pred EEEcCCceEEEEEEeeeEEEEEecccceeeccchhhh---hhcccceeEEeccccceEEEeccCCcEEEEeccccccccc
Confidence 8888888877777766899999887651111111111 3366689999999997 88999999999997432 1 2
Q ss_pred eEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CC
Q psy12614 236 QWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GN 313 (708)
Q Consensus 236 ~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~ 313 (708)
....+.-|...|.+++|+++|.+|++|+..|.+.+|.+.+ ++ ...++.-.++|..+.++ ++
T Consensus 243 t~t~lHWH~~~V~~L~fS~~G~~LlSGG~E~VLv~Wq~~T--------~~---------kqfLPRLgs~I~~i~vS~ds~ 305 (792)
T KOG1963|consen 243 TCTLLHWHHDEVNSLSFSSDGAYLLSGGREGVLVLWQLET--------GK---------KQFLPRLGSPILHIVVSPDSD 305 (792)
T ss_pred cceEEEecccccceeEEecCCceEeecccceEEEEEeecC--------CC---------cccccccCCeeEEEEEcCCCC
Confidence 3456777999999999999999999999999999999999 53 34455567889999999 88
Q ss_pred EEEEEcCCCeEEEEeCCCCc----eeecCcc--------CCCCceEEEEcCC-cEEEEEcCCeEEEEEecCCCCCCCCCC
Q psy12614 314 RLYSGGLDSYLSLSYYPPKT----LVKYPCT--------LAQSTPVSLAKDI-QHVLLQYTSHLELWSLGSAQSTDLSSH 380 (708)
Q Consensus 314 ~l~s~~~d~~i~iw~~~~~~----~~~~~~~--------~~~~~~~~~s~~~-~~l~~~~~~~i~i~~~~~~~~~~~~~~ 380 (708)
+.+....|..|.+....+.. +..+..+ ..-...+.++|.- ..++.+..+.+++||+.+..
T Consensus 306 ~~sl~~~DNqI~li~~~dl~~k~tIsgi~~~~~~~k~~~~~l~t~~~idpr~~~~vln~~~g~vQ~ydl~td~------- 378 (792)
T KOG1963|consen 306 LYSLVLEDNQIHLIKASDLEIKSTISGIKPPTPSTKTRPQSLTTGVSIDPRTNSLVLNGHPGHVQFYDLYTDS------- 378 (792)
T ss_pred eEEEEecCceEEEEeccchhhhhhccCccCCCccccccccccceeEEEcCCCCceeecCCCceEEEEeccccc-------
Confidence 88888899999998876544 2222211 1122468888844 44455799999999998766
Q ss_pred CCCCcccCCCCceEEEEEEe----------cCCCceEEEEeCCCCcEEEEEc---------C--CceEEEEEEecCCcce
Q psy12614 381 SNTTGVPLLSFPRLIVKMSA----------VNNATIRCSVVSNDGKYVAYST---------E--SCVRLHSLDLDGDKPQ 439 (708)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~----------~~~~~i~~~~~s~~g~~l~~~~---------d--~~i~i~~~~~~~~~~~ 439 (708)
.+.++.. .+.-.+++++.+-.|.++++.. | -.+++|..........
T Consensus 379 -------------~i~~~~v~~~n~~~~~~n~~v~itav~~~~~gs~maT~E~~~d~~~~~~~e~~LKFW~~n~~~kt~~ 445 (792)
T KOG1963|consen 379 -------------TIYKLQVCDENYSDGDVNIQVGITAVARSRFGSWMATLEARIDKFNFFDGEVSLKFWQYNPNSKTFI 445 (792)
T ss_pred -------------eeeeEEEEeecccCCcceeEEeeeeehhhccceEEEEeeeeehhhhccCceEEEEEEEEcCCcceeE
Confidence 1111111 1123467788888899999742 2 2478898876444444
Q ss_pred eEEeecCCcccccceeEEEEEecCCC-eEEEEecCCc--EEEecCC----------CeEEEEEecCCCCCccCcceEEEE
Q psy12614 440 ISRIKNLPAPLFKSIFTHVLISADST-LLLAVSLNGP--LYIIDLS----------SLEIKYCVDPYKSNLMSDVISLVQ 506 (708)
Q Consensus 440 ~~~~~~~~~~~~~~~i~~~~~s~d~~-~l~~~~~dg~--i~~~~~~----------~~~~~~~~~~~~~~~~~~~i~~~~ 506 (708)
+...-..| |... .+..+..++... ..++++.||. ||.+... .+..+ ++.|..+++.++
T Consensus 446 L~T~I~~P-H~~~-~vat~~~~~~rs~~~vta~~dg~~KiW~~~~~~n~~k~~s~W~c~~i-------~sy~k~~i~a~~ 516 (792)
T KOG1963|consen 446 LNTKINNP-HGNA-FVATIFLNPTRSVRCVTASVDGDFKIWVFTDDSNIYKKSSNWTCKAI-------GSYHKTPITALC 516 (792)
T ss_pred EEEEEecC-CCce-eEEEEEecCcccceeEEeccCCeEEEEEEecccccCcCccceEEeee-------eccccCcccchh
Confidence 43322122 3322 222233344443 7888989998 9998332 11111 122277899999
Q ss_pred ECCCCcEEEEEecCCeEEEEECCc---eeeecCCCCCCceEEEEcCC--CCEEEEEecCCcEEEEEcCCCCCCch
Q psy12614 507 MSECKQYIVCADRKSHVVIWKNGQ---HHASLPRYRKPSTAMAIHPT--LSTLVTVYSDHRIVEFDLNRKAFTTF 576 (708)
Q Consensus 507 ~s~~~~~l~~~~~d~~i~iw~~~~---~~~~~~~~~~~v~~l~~s~d--~~~l~~~~~dg~i~vwd~~~~~~~~~ 576 (708)
||.||..|+++ .+++|.+||..+ .++....-..++..+.|... ....++....+.+.+|++...... |
T Consensus 517 fs~dGslla~s-~~~~Itiwd~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~WNll~~~l~-w 589 (792)
T KOG1963|consen 517 FSQDGSLLAVS-FDDTITIWDYDTKNELLCTEGSRNWPIAELLFTAQTQNDGALVHATQQRLSVWNLLSMSLI-W 589 (792)
T ss_pred hcCCCcEEEEe-cCCEEEEecCCChhhhhccccccccchHhHhhhcccccccceeeccCceEehHhhhhhhee-c
Confidence 99999877766 688999999995 23333333344555555431 122344456778999999988766 5
|
|
| >PTZ00420 coronin; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.7e-25 Score=223.67 Aligned_cols=246 Identities=13% Similarity=0.135 Sum_probs=188.1
Q ss_pred EcCCCcEEEEECCCCeEeEEEeecCCceEEEEEecC-CCEEEEEeCCCcEEEEEccCCcE------EEEEecccccccEE
Q psy12614 87 GGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKK-KRLLAAGTEQGHINLFQISDEGL------LYEKLLDRQQGRIL 159 (708)
Q Consensus 87 ~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~-~~~la~~~~d~~i~iwd~~~~~~------~~~~~~~~~~~~v~ 159 (708)
|+.++.|++|+......+..+.+|.+.|.+++|+|+ +.+||+|+.|+.|++||+.++.. .....+.+|...|.
T Consensus 50 GG~~gvI~L~~~~r~~~v~~L~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~~V~ 129 (568)
T PTZ00420 50 GGLIGAIRLENQMRKPPVIKLKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKKKIS 129 (568)
T ss_pred CCceeEEEeeecCCCceEEEEcCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccceEEeecCCCcEE
Confidence 456788999999888888999999999999999997 78999999999999999976421 01245778999999
Q ss_pred EEEECCCCCEE-EEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCee
Q psy12614 160 CTAWHSSGDYL-VTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQ 236 (708)
Q Consensus 160 ~~~~s~d~~~l-~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~ 236 (708)
+++|+|++..+ ++++.| .|++||+.+++....+.. ...|.+++|+|+|. +++++.|+.|++||+++++.
T Consensus 130 sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~~~~~i~~--------~~~V~SlswspdG~lLat~s~D~~IrIwD~Rsg~~ 201 (568)
T PTZ00420 130 IIDWNPMNYYIMCSSGFDSFVNIWDIENEKRAFQINM--------PKKLSSLKWNIKGNLLSGTCVGKHMHIIDPRKQEI 201 (568)
T ss_pred EEEECCCCCeEEEEEeCCCeEEEEECCCCcEEEEEec--------CCcEEEEEECCCCCEEEEEecCCEEEEEECCCCcE
Confidence 99999998765 688889 999999999987766532 46799999999996 77788899999999999999
Q ss_pred EEEeeccccCeEEE-----EEeCCCCEEEEEecCC----eEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEE
Q psy12614 237 WSDVKTHKKDILAL-----TVSEDENYLYCAGVDP----TVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKS 307 (708)
Q Consensus 237 ~~~~~~~~~~i~~~-----~~s~~~~~l~~~~~dg----~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~ 307 (708)
+..+.+|.+.+.+. .|++++.+|++++.|+ .|++||++. .. ..+....+..+.+.+..
T Consensus 202 i~tl~gH~g~~~s~~v~~~~fs~d~~~IlTtG~d~~~~R~VkLWDlr~--------~~-----~pl~~~~ld~~~~~L~p 268 (568)
T PTZ00420 202 ASSFHIHDGGKNTKNIWIDGLGGDDNYILSTGFSKNNMREMKLWDLKN--------TT-----SALVTMSIDNASAPLIP 268 (568)
T ss_pred EEEEecccCCceeEEEEeeeEcCCCCEEEEEEcCCCCccEEEEEECCC--------CC-----CceEEEEecCCccceEE
Confidence 99999998765443 3458889999988774 799999985 21 11112222222333322
Q ss_pred EEEe--CCEEEEEcCCCeEEEEeCCCCceeecCc--cCCCCceEEEEcCC
Q psy12614 308 LALH--GNRLYSGGLDSYLSLSYYPPKTLVKYPC--TLAQSTPVSLAKDI 353 (708)
Q Consensus 308 l~~~--~~~l~s~~~d~~i~iw~~~~~~~~~~~~--~~~~~~~~~~s~~~ 353 (708)
.... +.++++|+.|+.|++|++....+..+.. ......+++|.|+.
T Consensus 269 ~~D~~tg~l~lsGkGD~tIr~~e~~~~~~~~l~~~~s~~p~~g~~f~Pkr 318 (568)
T PTZ00420 269 HYDESTGLIYLIGKGDGNCRYYQHSLGSIRKVNEYKSCSPFRSFGFLPKQ 318 (568)
T ss_pred eeeCCCCCEEEEEECCCeEEEEEccCCcEEeecccccCCCccceEEcccc
Confidence 2222 7788999999999999998776444331 22334567777763
|
|
| >KOG0647|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.1e-25 Score=194.29 Aligned_cols=236 Identities=13% Similarity=0.210 Sum_probs=185.1
Q ss_pred CCcEEEEEEe---CCEEEEEcCCCcEEEEECCC-CeEe-EEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcE
Q psy12614 71 SNSIECLTWF---NDRLFSGGLQGFVNEYDMRR-LNIK-SSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGL 145 (708)
Q Consensus 71 ~~~v~~l~~~---~~~l~s~~~d~~i~vwd~~~-~~~~-~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~ 145 (708)
...|.+|+|| ...++.++.||+|++|+++. |... +....|.++|.+++|+.||..+++|+.|+.+++||+.+++.
T Consensus 27 ~DsIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~g~~~~ka~~~~~~PvL~v~WsddgskVf~g~~Dk~~k~wDL~S~Q~ 106 (347)
T KOG0647|consen 27 EDSISALAFSPQADNLLAAGSWDGTVRIWEVQNSGQLVPKAQQSHDGPVLDVCWSDDGSKVFSGGCDKQAKLWDLASGQV 106 (347)
T ss_pred ccchheeEeccccCceEEecccCCceEEEEEecCCcccchhhhccCCCeEEEEEccCCceEEeeccCCceEEEEccCCCe
Confidence 3899999999 66777899999999999988 3433 34557899999999999999999999999999999999977
Q ss_pred EEEEecccccccEEEEEECCCCC--EEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEEEEcC
Q psy12614 146 LYEKLLDRQQGRILCTAWHSSGD--YLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDS 222 (708)
Q Consensus 146 ~~~~~~~~~~~~v~~~~~s~d~~--~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~ 222 (708)
..+..|.++|.++.|-+... .|++|+.| +|+.||.+...++.++..+ ..++++..-.. .++++..
T Consensus 107 ---~~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~~pv~t~~LP--------eRvYa~Dv~~p-m~vVata 174 (347)
T KOG0647|consen 107 ---SQVAAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSSNPVATLQLP--------ERVYAADVLYP-MAVVATA 174 (347)
T ss_pred ---eeeeecccceeEEEEecCCCcceeEecccccceeecccCCCCeeeeeecc--------ceeeehhccCc-eeEEEec
Confidence 57888999999999987665 89999999 9999999999999888764 45665543321 3778888
Q ss_pred CCcEEEEeCCCCeeEE-Ee-eccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEec
Q psy12614 223 GGFVRFWDGKTGVQWS-DV-KTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVI 300 (708)
Q Consensus 223 dg~i~~wd~~~~~~~~-~~-~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 300 (708)
+..|.+|+++++.... .+ ...+-.+.|++..+|....+.|+-+|.+.+..++. +.. .....++.
T Consensus 175 ~r~i~vynL~n~~te~k~~~SpLk~Q~R~va~f~d~~~~alGsiEGrv~iq~id~--------~~~------~~nFtFkC 240 (347)
T KOG0647|consen 175 ERHIAVYNLENPPTEFKRIESPLKWQTRCVACFQDKDGFALGSIEGRVAIQYIDD--------PNP------KDNFTFKC 240 (347)
T ss_pred CCcEEEEEcCCCcchhhhhcCcccceeeEEEEEecCCceEeeeecceEEEEecCC--------CCc------cCceeEEE
Confidence 9999999997764322 11 12345788999999988889999999999999987 420 12234444
Q ss_pred ccc---------ceEEEEEe--CCEEEEEcCCCeEEEEeCCCC
Q psy12614 301 HEG---------DVKSLALH--GNRLYSGGLDSYLSLSYYPPK 332 (708)
Q Consensus 301 ~~~---------~v~~l~~~--~~~l~s~~~d~~i~iw~~~~~ 332 (708)
|.. .|.+++|+ -..|+|+|.||+..+||-+..
T Consensus 241 HR~~~~~~~~VYaVNsi~FhP~hgtlvTaGsDGtf~FWDkdar 283 (347)
T KOG0647|consen 241 HRSTNSVNDDVYAVNSIAFHPVHGTLVTAGSDGTFSFWDKDAR 283 (347)
T ss_pred eccCCCCCCceEEecceEeecccceEEEecCCceEEEecchhh
Confidence 542 35667777 677888888888888776543
|
|
| >KOG1538|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.8e-25 Score=210.36 Aligned_cols=478 Identities=14% Similarity=0.209 Sum_probs=317.7
Q ss_pred eeeccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEE
Q psy12614 19 IKFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEY 96 (708)
Q Consensus 19 ~~~~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vw 96 (708)
.++...| .|..++|-|||..|+.+..+ .+.|||...|..+. ++.||+ ..|.+++|+ |+++++|+.|..|.+|
T Consensus 7 ~r~~~~h--ci~d~afkPDGsqL~lAAg~-rlliyD~ndG~llq-tLKgHK--DtVycVAys~dGkrFASG~aDK~VI~W 80 (1081)
T KOG1538|consen 7 WRDKAEH--CINDIAFKPDGTQLILAAGS-RLLVYDTSDGTLLQ-PLKGHK--DTVYCVAYAKDGKRFASGSADKSVIIW 80 (1081)
T ss_pred hhccccc--chheeEECCCCceEEEecCC-EEEEEeCCCccccc-cccccc--ceEEEEEEccCCceeccCCCceeEEEe
Confidence 4455555 79999999999998887644 89999999999887 999999 999999999 9999999999999999
Q ss_pred ECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC
Q psy12614 97 DMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA 176 (708)
Q Consensus 97 d~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d 176 (708)
+-+-...++ -.|+..|.||.|+|-...|++++-. ..-+|..+..... -.....++.+.+|..||++++.|-.+
T Consensus 81 ~~klEG~Lk--YSH~D~IQCMsFNP~~h~LasCsLs-dFglWS~~qK~V~----K~kss~R~~~CsWtnDGqylalG~~n 153 (1081)
T KOG1538|consen 81 TSKLEGILK--YSHNDAIQCMSFNPITHQLASCSLS-DFGLWSPEQKSVS----KHKSSSRIICCSWTNDGQYLALGMFN 153 (1081)
T ss_pred cccccceee--eccCCeeeEeecCchHHHhhhcchh-hccccChhhhhHH----hhhhheeEEEeeecCCCcEEEEeccC
Confidence 854432222 1688999999999999999997653 4678887655442 11224678999999999999999999
Q ss_pred -eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCC------EEEEEcCCCcEEEEeCCCCeeEEEeeccccCeEE
Q psy12614 177 -AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADF------TIITGDSGGFVRFWDGKTGVQWSDVKTHKKDILA 249 (708)
Q Consensus 177 -~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~------~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~ 249 (708)
+|.+-+ .+|+....+..+. +...+|++++|+|.. .+++.+...++.+|.+ +|+.+..-....-...|
T Consensus 154 GTIsiRN-k~gEek~~I~Rpg----g~Nspiwsi~~~p~sg~G~~di~aV~DW~qTLSFy~L-sG~~Igk~r~L~FdP~C 227 (1081)
T KOG1538|consen 154 GTISIRN-KNGEEKVKIERPG----GSNSPIWSICWNPSSGEGRNDILAVADWGQTLSFYQL-SGKQIGKDRALNFDPCC 227 (1081)
T ss_pred ceEEeec-CCCCcceEEeCCC----CCCCCceEEEecCCCCCCccceEEEEeccceeEEEEe-cceeecccccCCCCchh
Confidence 998876 4566655555543 458999999999953 3788889999999997 47777655555566789
Q ss_pred EEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEEEcCCCeEEEE
Q psy12614 250 LTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSGGLDSYLSLS 327 (708)
Q Consensus 250 ~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~~~d~~i~iw 327 (708)
+.+.++|.++..|+.|+.+.+|.... +.+.++......|+.++.. ++.++.|+.||+|..|
T Consensus 228 isYf~NGEy~LiGGsdk~L~~fTR~G-----------------vrLGTvg~~D~WIWtV~~~PNsQ~v~~GCqDGTiACy 290 (1081)
T KOG1538|consen 228 ISYFTNGEYILLGGSDKQLSLFTRDG-----------------VRLGTVGEQDSWIWTVQAKPNSQYVVVGCQDGTIACY 290 (1081)
T ss_pred heeccCCcEEEEccCCCceEEEeecC-----------------eEEeeccccceeEEEEEEccCCceEEEEEccCeeehh
Confidence 99999999999999999999998775 2445555567789999888 8899999999999999
Q ss_pred eCCCCceeecC---------------ccCCCCceEEEE---------cCCcEEEEEcCCeEEEEEecCCCCCCCCCCCCC
Q psy12614 328 YYPPKTLVKYP---------------CTLAQSTPVSLA---------KDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNT 383 (708)
Q Consensus 328 ~~~~~~~~~~~---------------~~~~~~~~~~~s---------~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~~ 383 (708)
++.......+. -+......+.+. --...+++.-...|.+|.+.++..
T Consensus 291 Nl~fSTVH~ly~~RYA~R~sMtDVivQhLi~~qkvrIkC~DLVkKiaiYrnrLAVQLpeki~iYel~se~~--------- 361 (1081)
T KOG1538|consen 291 NLIFSTVHGLYKDRYAYRDSMTDVIVQHLITEQKVRIKCKDLVKKIAIYRNRLAVQLPEKILIYELYSEDL--------- 361 (1081)
T ss_pred hhHHhHhhhhhHHhhhhhhhhHHHHHHHHhhcceeeeeHHHHHHHHHhhhhhheecccceEEEEecccccc---------
Confidence 88654311110 000001111111 012345555666777887776441
Q ss_pred CcccCCCCceEE-EEEEecCCCceEEEEeCCCCcEEEEEcCCceEEEEEEecCCcceeEEeecCCcccccceeEEEEEec
Q psy12614 384 TGVPLLSFPRLI-VKMSAVNNATIRCSVVSNDGKYVAYSTESCVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVLISA 462 (708)
Q Consensus 384 ~~~~~~~~~~~~-~~~~~~~~~~i~~~~~s~~g~~l~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~ 462 (708)
..+ .++...-.....+--+--.+..++.+.+..+.-+|+..-... .+. +..- ...|.-+-=-+
T Consensus 362 ---------~~mhY~v~ekI~kkf~cSLlVVc~~HiVlCqekrLqClDF~Gvk~R-eW~----M~S~--iRYikV~GGP~ 425 (1081)
T KOG1538|consen 362 ---------SDMHYRVKEKIIKKFECSLLVVCANHIVLCQEKRLQCLDFSGVKER-EWQ----MESL--IRYIKVIGGPP 425 (1081)
T ss_pred ---------ccchhHHHHHHHhhccceEEEEEcCeEEEEcccceeeecccchhhh-hhh----HHHH--HHhhhhhcCCC
Confidence 000 000000000001100001234555666777777776531100 000 0000 11111011112
Q ss_pred CCCeEEEEecCCcEEEecCCCeEEEEEecCCCCCccCcceEEEEECCCCcEEEEEecCCeEEEEECCceeeecCCCCCCc
Q psy12614 463 DSTLLLAVSLNGPLYIIDLSSLEIKYCVDPYKSNLMSDVISLVQMSECKQYIVCADRKSHVVIWKNGQHHASLPRYRKPS 542 (708)
Q Consensus 463 d~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~v 542 (708)
...-|++|..+|.++.+-..+.-.+-... . ...|.|+..+...+.||+..+.++..++|+.+.+.-+. ...+
T Consensus 426 gREgL~vGlknGqV~kiF~dN~~PiLl~~--~----~tAvrClDINA~R~kLAvVDD~~~c~v~DI~t~elL~Q--Epg~ 497 (1081)
T KOG1538|consen 426 GREGLLVGLKNGQVLKIFVDNLFPILLLK--Q----ATAVRCLDINASRKKLAVVDDNDTCLVYDIDTKELLFQ--EPGA 497 (1081)
T ss_pred CcceeEEEecCCcEEEEEecCCchhheec--c----cceeEEeeccCCcceEEEEccCCeEEEEEccCCceEee--cCCC
Confidence 34567788899986665333211111111 1 55899999999999999999999999999996655443 2357
Q ss_pred eEEEEcCCCCEEEEEecCCcEEE
Q psy12614 543 TAMAIHPTLSTLVTVYSDHRIVE 565 (708)
Q Consensus 543 ~~l~~s~d~~~l~~~~~dg~i~v 565 (708)
.+++|+....-++.=+..|.+.|
T Consensus 498 nSV~wNT~~E~MlcfT~~g~L~V 520 (1081)
T KOG1538|consen 498 NSVAWNTQCEDMLCFTGGGYLNV 520 (1081)
T ss_pred ceEEeeccccceEEEecCCceEE
Confidence 88999875443333333354433
|
|
| >KOG0650|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.6e-25 Score=211.18 Aligned_cols=299 Identities=17% Similarity=0.236 Sum_probs=242.0
Q ss_pred CCCccceeeeeeeeccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--C--CE
Q psy12614 8 RNTMGTYGVHNIKFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--N--DR 83 (708)
Q Consensus 8 ~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~--~~ 83 (708)
...++.|.......+.||++.|.|++..|.|.+||+|+.||+|+||.+.+|.++..... .+.|.|++|+ + ..
T Consensus 382 p~dLrPFPt~~~lvyrGHtg~Vr~iSvdp~G~wlasGsdDGtvriWEi~TgRcvr~~~~----d~~I~~vaw~P~~~~~v 457 (733)
T KOG0650|consen 382 PKDLRPFPTRCALVYRGHTGLVRSISVDPSGEWLASGSDDGTVRIWEIATGRCVRTVQF----DSEIRSVAWNPLSDLCV 457 (733)
T ss_pred hhhcCCCcceeeeeEeccCCeEEEEEecCCcceeeecCCCCcEEEEEeecceEEEEEee----cceeEEEEecCCCCcee
Confidence 45677787777788999999999999999999999999999999999999999874433 3679999999 2 23
Q ss_pred EEEEcCCC--------------------------------cEEEEECCCC----eEeEEEeecCCceEEEEEecCCCEEE
Q psy12614 84 LFSGGLQG--------------------------------FVNEYDMRRL----NIKSSTAVTSGTCWCLSVHKKKRLLA 127 (708)
Q Consensus 84 l~s~~~d~--------------------------------~i~vwd~~~~----~~~~~~~~~~~~v~~~~~s~~~~~la 127 (708)
||++-... .+..|.-... +-++..-.|...|..+.|+..|.|||
T Consensus 458 LAvA~~~~~~ivnp~~G~~~e~~~t~ell~~~~~~~~p~~~~~~W~~~~~~e~~~~v~~~I~~~k~i~~vtWHrkGDYla 537 (733)
T KOG0650|consen 458 LAVAVGECVLIVNPIFGDRLEVGPTKELLASAPNESEPDAAVVTWSRASLDELEKGVCIVIKHPKSIRQVTWHRKGDYLA 537 (733)
T ss_pred EEEEecCceEEeCccccchhhhcchhhhhhcCCCccCCcccceeechhhhhhhccceEEEEecCCccceeeeecCCceEE
Confidence 33332222 2233432211 11334456788999999999999999
Q ss_pred EEeC---CCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCCeEEEEEcCCCceEEEEEecccCCCCCce
Q psy12614 128 AGTE---QGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAAAVRVWDIHKGHAIHKMSLDKSSKFSKNT 204 (708)
Q Consensus 128 ~~~~---d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 204 (708)
+... ...|.|.++...... ..|....+.|.++.|+|...+|++++...|++||+..++.+.++..+ ..
T Consensus 538 tV~~~~~~~~VliHQLSK~~sQ--~PF~kskG~vq~v~FHPs~p~lfVaTq~~vRiYdL~kqelvKkL~tg-------~k 608 (733)
T KOG0650|consen 538 TVMPDSGNKSVLIHQLSKRKSQ--SPFRKSKGLVQRVKFHPSKPYLFVATQRSVRIYDLSKQELVKKLLTG-------SK 608 (733)
T ss_pred EeccCCCcceEEEEeccccccc--CchhhcCCceeEEEecCCCceEEEEeccceEEEehhHHHHHHHHhcC-------Ce
Confidence 8765 356899999877665 56767788999999999999999999999999999998888888766 78
Q ss_pred eEEEEEEccCC-EEEEEcCCCcEEEEeCCCC-eeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccC
Q psy12614 205 AVWCVAFCADF-TIITGDSGGFVRFWDGKTG-VQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCST 282 (708)
Q Consensus 205 ~v~~~~~~~~~-~l~~~~~dg~i~~wd~~~~-~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~ 282 (708)
.|..++.+|.| +++.|+.|+.+..+|+.-+ ++.+++..|...+++++|.+.-.++++|+.||.+.+|.-.-
T Consensus 609 wiS~msihp~GDnli~gs~d~k~~WfDldlsskPyk~lr~H~~avr~Va~H~ryPLfas~sdDgtv~Vfhg~V------- 681 (733)
T KOG0650|consen 609 WISSMSIHPNGDNLILGSYDKKMCWFDLDLSSKPYKTLRLHEKAVRSVAFHKRYPLFASGSDDGTVIVFHGMV------- 681 (733)
T ss_pred eeeeeeecCCCCeEEEecCCCeeEEEEcccCcchhHHhhhhhhhhhhhhhccccceeeeecCCCcEEEEeeee-------
Confidence 89999999998 5999999999999999755 56788889999999999999999999999999999885432
Q ss_pred CCCCC-CCcceEEeEEEeccccc----eEEEEEe--CCEEEEEcCCCeEEEE
Q psy12614 283 SGPEQ-GSSVWVRSVNRVIHEGD----VKSLALH--GNRLYSGGLDSYLSLS 327 (708)
Q Consensus 283 ~g~~~-~~~~~~~~~~~~~~~~~----v~~l~~~--~~~l~s~~~d~~i~iw 327 (708)
-.+. +.+-..++..+++|... |....|+ ..+|++++.||+|++|
T Consensus 682 -Y~Dl~qnpliVPlK~L~gH~~~~~~gVLd~~wHP~qpWLfsAGAd~tirlf 732 (733)
T KOG0650|consen 682 -YNDLLQNPLIVPLKRLRGHEKTNDLGVLDTIWHPRQPWLFSAGADGTIRLF 732 (733)
T ss_pred -ehhhhcCCceEeeeeccCceeecccceEeecccCCCceEEecCCCceEEee
Confidence 1111 23445678888999766 8888899 8899999999999998
|
|
| >KOG0641|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.4e-23 Score=173.54 Aligned_cols=281 Identities=14% Similarity=0.204 Sum_probs=221.0
Q ss_pred CcEEEEEEe--CCEEEEEcCCCcEEEEECCC------Ce---------EeEEEeecCCceEEEEEecCCCEEEEEeCCCc
Q psy12614 72 NSIECLTWF--NDRLFSGGLQGFVNEYDMRR------LN---------IKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGH 134 (708)
Q Consensus 72 ~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~------~~---------~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~ 134 (708)
..|.+++|. |...++|+...+++|--... +. ..+.-+.|.+.|.|.+|+|+|+++|+|+.|.+
T Consensus 33 qairav~fhp~g~lyavgsnskt~ric~yp~l~~~r~~hea~~~pp~v~~kr~khhkgsiyc~~ws~~geliatgsndk~ 112 (350)
T KOG0641|consen 33 QAIRAVAFHPAGGLYAVGSNSKTFRICAYPALIDLRHAHEAAKQPPSVLCKRNKHHKGSIYCTAWSPCGELIATGSNDKT 112 (350)
T ss_pred hheeeEEecCCCceEEeccCCceEEEEccccccCcccccccccCCCeEEeeeccccCccEEEEEecCccCeEEecCCCce
Confidence 689999999 99999999999999875322 11 12233478899999999999999999999999
Q ss_pred EEEEEccCCcEE---EEEecccccccEEEEEECCC----CCEEEEecCC--eEEEEEcCCCceEEEEEecccCCCCCcee
Q psy12614 135 INLFQISDEGLL---YEKLLDRQQGRILCTAWHSS----GDYLVTGCAA--AVRVWDIHKGHAIHKMSLDKSSKFSKNTA 205 (708)
Q Consensus 135 i~iwd~~~~~~~---~~~~~~~~~~~v~~~~~s~d----~~~l~~~~~d--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 205 (708)
|++......... ....+.-|.+.|..++|..+ +..|++++.+ .|++-|...|+....+. +|.+-
T Consensus 113 ik~l~fn~dt~~~~g~dle~nmhdgtirdl~fld~~~s~~~il~s~gagdc~iy~tdc~~g~~~~a~s-------ghtgh 185 (350)
T KOG0641|consen 113 IKVLPFNADTCNATGHDLEFNMHDGTIRDLAFLDDPESGGAILASAGAGDCKIYITDCGRGQGFHALS-------GHTGH 185 (350)
T ss_pred EEEEecccccccccCcceeeeecCCceeeeEEecCCCcCceEEEecCCCcceEEEeecCCCCcceeec-------CCccc
Confidence 999776543221 22457779999999999644 5678887765 89999999999888776 44777
Q ss_pred EEEEEEccCCEEEEEcCCCcEEEEeCCCCeeEEEeec-------cccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcc
Q psy12614 206 VWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVKT-------HKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQ 278 (708)
Q Consensus 206 v~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~-------~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~ 278 (708)
|.++---..-.+++|+.|.+|++||++-..++.++.. ....|.+++..|.|++|++|-.|....+||++.
T Consensus 186 ilalyswn~~m~~sgsqdktirfwdlrv~~~v~~l~~~~~~~glessavaav~vdpsgrll~sg~~dssc~lydirg--- 262 (350)
T KOG0641|consen 186 ILALYSWNGAMFASGSQDKTIRFWDLRVNSCVNTLDNDFHDGGLESSAVAAVAVDPSGRLLASGHADSSCMLYDIRG--- 262 (350)
T ss_pred EEEEEEecCcEEEccCCCceEEEEeeeccceeeeccCcccCCCcccceeEEEEECCCcceeeeccCCCceEEEEeeC---
Confidence 8776322233699999999999999998888877632 236789999999999999999999999999998
Q ss_pred cccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEEEcCCCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEE
Q psy12614 279 VCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHV 356 (708)
Q Consensus 279 ~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l 356 (708)
+. .+..+..|...|+++.|+ ..++++++.|..|++-|+......+++
T Consensus 263 -----~r--------~iq~f~phsadir~vrfsp~a~yllt~syd~~ikltdlqgdla~el~------------------ 311 (350)
T KOG0641|consen 263 -----GR--------MIQRFHPHSADIRCVRFSPGAHYLLTCSYDMKIKLTDLQGDLAHELP------------------ 311 (350)
T ss_pred -----Cc--------eeeeeCCCccceeEEEeCCCceEEEEecccceEEEeecccchhhcCc------------------
Confidence 76 788899999999999999 679999999999999888765433333
Q ss_pred EEEcCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEE-EcCCceEEEEEE
Q psy12614 357 LLQYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAY-STESCVRLHSLD 432 (708)
Q Consensus 357 ~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~-~~d~~i~i~~~~ 432 (708)
.-+...|...+..+.|+|..--+++ +.|.++.+|.+.
T Consensus 312 ---------------------------------------~~vv~ehkdk~i~~rwh~~d~sfisssadkt~tlwa~~ 349 (350)
T KOG0641|consen 312 ---------------------------------------IMVVAEHKDKAIQCRWHPQDFSFISSSADKTATLWALN 349 (350)
T ss_pred ---------------------------------------eEEEEeccCceEEEEecCccceeeeccCcceEEEeccC
Confidence 1122356677777889887765665 559999999764
|
|
| >KOG1963|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=8.6e-23 Score=203.98 Aligned_cols=464 Identities=13% Similarity=0.107 Sum_probs=303.4
Q ss_pred EEEe-CCEEEEEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCC---EEEEEeCCCcEEEEEccCCcEEEEEecc
Q psy12614 77 LTWF-NDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKR---LLAAGTEQGHINLFQISDEGLLYEKLLD 152 (708)
Q Consensus 77 l~~~-~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~---~la~~~~d~~i~iwd~~~~~~~~~~~~~ 152 (708)
-.|+ ..+.+.+..+..|.||...++.++..+..|..++..+.+.|... ++.+++.+|.|++||...+++. +++.
T Consensus 22 avfSnD~k~l~~~~~~~V~VyS~~Tg~~i~~l~~~~a~l~s~~~~~~~~~~~~~~~~sl~G~I~vwd~~~~~Ll--kt~~ 99 (792)
T KOG1963|consen 22 AVFSNDAKFLFLCTGNFVKVYSTATGECITSLEDHTAPLTSVIVLPSSENANYLIVCSLDGTIRVWDWSDGELL--KTFD 99 (792)
T ss_pred cccccCCcEEEEeeCCEEEEEecchHhhhhhcccccCccceeeecCCCccceEEEEEecCccEEEecCCCcEEE--EEEe
Confidence 3466 55555566678999999999999999999999999999988644 6778999999999999999987 4443
Q ss_pred cccccEEEEEECC---CCCEEE-EecCC--eEEEEEcCCCceEEEEEecccC----CC-CCceeEEEEEEccCCEEEEEc
Q psy12614 153 RQQGRILCTAWHS---SGDYLV-TGCAA--AVRVWDIHKGHAIHKMSLDKSS----KF-SKNTAVWCVAFCADFTIITGD 221 (708)
Q Consensus 153 ~~~~~v~~~~~s~---d~~~l~-~~~~d--~i~iwd~~~~~~~~~~~~~~~~----~~-~~~~~v~~~~~~~~~~l~~~~ 221 (708)
. ..++..+.+.| +...++ .+..+ .+.............+...... .| .....-.++.+++.|.+....
T Consensus 100 ~-~~~v~~~~~~~~~a~~s~~~~~s~~~~~~~~~~s~~~~~q~~~~~~~t~~~~~~d~~~~~~~~~~I~~~~~ge~~~i~ 178 (792)
T KOG1963|consen 100 N-NLPVHALVYKPAQADISANVYVSVEDYSILTTFSKKLSKQSSRFVLATFDSAKGDFLKEHQEPKSIVDNNSGEFKGIV 178 (792)
T ss_pred c-CCceeEEEechhHhCccceeEeecccceeeeecccccccceeeeEeeeccccchhhhhhhcCCccEEEcCCceEEEEE
Confidence 2 23344444322 111222 22222 2222222222222222221100 00 001114577888888877777
Q ss_pred CCCcEEEEeCCCCeeEEE----eeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEE
Q psy12614 222 SGGFVRFWDGKTGVQWSD----VKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVN 297 (708)
Q Consensus 222 ~dg~i~~wd~~~~~~~~~----~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~ 297 (708)
.+..+.+|+......... -..|...+++.+++|+++++++|..||.|.+|.--. .+ ..-.....
T Consensus 179 ~~~~~~~~~v~~~~~~~~~~~~~~~Htf~~t~~~~spn~~~~Aa~d~dGrI~vw~d~~--------~~----~~~~t~t~ 246 (792)
T KOG1963|consen 179 HMCKIHIYFVPKHTKHTSSRDITVHHTFNITCVALSPNERYLAAGDSDGRILVWRDFG--------SS----DDSETCTL 246 (792)
T ss_pred EeeeEEEEEecccceeeccchhhhhhcccceeEEeccccceEEEeccCCcEEEEeccc--------cc----cccccceE
Confidence 788899999887552111 124677789999999999999999999999996543 11 01113566
Q ss_pred EeccccceEEEEEe--CCEEEEEcCCCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEE-EcCCeEEEEEecCCCC
Q psy12614 298 RVIHEGDVKSLALH--GNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLL-QYTSHLELWSLGSAQS 374 (708)
Q Consensus 298 ~~~~~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~-~~~~~i~i~~~~~~~~ 374 (708)
+.-|...|.+++|+ |.+|++||..+.+.+|.+.++...-++.-......+.+|||+.+.+. ..|+.|.+....+.+.
T Consensus 247 lHWH~~~V~~L~fS~~G~~LlSGG~E~VLv~Wq~~T~~kqfLPRLgs~I~~i~vS~ds~~~sl~~~DNqI~li~~~dl~~ 326 (792)
T KOG1963|consen 247 LHWHHDEVNSLSFSSDGAYLLSGGREGVLVLWQLETGKKQFLPRLGSPILHIVVSPDSDLYSLVLEDNQIHLIKASDLEI 326 (792)
T ss_pred EEecccccceeEEecCCceEeecccceEEEEEeecCCCcccccccCCeeEEEEEcCCCCeEEEEecCceEEEEeccchhh
Confidence 77899999999999 99999999999999999999883334433345577999999998876 5899999988765441
Q ss_pred -CCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEE-EEcCCceEEEEEEecCCcceeEEee--cCCccc
Q psy12614 375 -TDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVA-YSTESCVRLHSLDLDGDKPQISRIK--NLPAPL 450 (708)
Q Consensus 375 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~-~~~d~~i~i~~~~~~~~~~~~~~~~--~~~~~~ 450 (708)
....|.... . -.......+-.+.++++|.-+.++ .+..+.|.+||+.+......+.... ...+..
T Consensus 327 k~tIsgi~~~----~-------~~~k~~~~~l~t~~~idpr~~~~vln~~~g~vQ~ydl~td~~i~~~~v~~~n~~~~~~ 395 (792)
T KOG1963|consen 327 KSTISGIKPP----T-------PSTKTRPQSLTTGVSIDPRTNSLVLNGHPGHVQFYDLYTDSTIYKLQVCDENYSDGDV 395 (792)
T ss_pred hhhccCccCC----C-------ccccccccccceeEEEcCCCCceeecCCCceEEEEeccccceeeeEEEEeecccCCcc
Confidence 111111000 0 000122344556788888444444 4779999999998755443333211 112221
Q ss_pred c-cceeEEEEEecCCCeEEEEe--------cCCc----EEEecCC--CeEEEEEecCCCCCccCcceEEEEE-CCC-CcE
Q psy12614 451 F-KSIFTHVLISADSTLLLAVS--------LNGP----LYIIDLS--SLEIKYCVDPYKSNLMSDVISLVQM-SEC-KQY 513 (708)
Q Consensus 451 ~-~~~i~~~~~s~d~~~l~~~~--------~dg~----i~~~~~~--~~~~~~~~~~~~~~~~~~~i~~~~~-s~~-~~~ 513 (708)
. ...++.++.+..|.++++.- .||. .|..+.. +..+...+..+. ...+...++ ++. ...
T Consensus 396 n~~v~itav~~~~~gs~maT~E~~~d~~~~~~~e~~LKFW~~n~~~kt~~L~T~I~~PH----~~~~vat~~~~~~rs~~ 471 (792)
T KOG1963|consen 396 NIQVGITAVARSRFGSWMATLEARIDKFNFFDGEVSLKFWQYNPNSKTFILNTKINNPH----GNAFVATIFLNPTRSVR 471 (792)
T ss_pred eeEEeeeeehhhccceEEEEeeeeehhhhccCceEEEEEEEEcCCcceeEEEEEEecCC----CceeEEEEEecCcccce
Confidence 1 34677888899999999864 2333 6666543 334444444433 334444444 333 338
Q ss_pred EEEEecCCeEEEEECC----------ceeeec--CCCCCCceEEEEcCCCCEEEEEecCCcEEEEEcCCC
Q psy12614 514 IVCADRKSHVVIWKNG----------QHHASL--PRYRKPSTAMAIHPTLSTLVTVYSDHRIVEFDLNRK 571 (708)
Q Consensus 514 l~~~~~d~~i~iw~~~----------~~~~~~--~~~~~~v~~l~~s~d~~~l~~~~~dg~i~vwd~~~~ 571 (708)
.++++.||.++||-+. ...|.. .-|..++++++|+.||..|+ .+.|++|.+||..+.
T Consensus 472 ~vta~~dg~~KiW~~~~~~n~~k~~s~W~c~~i~sy~k~~i~a~~fs~dGslla-~s~~~~Itiwd~~~~ 540 (792)
T KOG1963|consen 472 CVTASVDGDFKIWVFTDDSNIYKKSSNWTCKAIGSYHKTPITALCFSQDGSLLA-VSFDDTITIWDYDTK 540 (792)
T ss_pred eEEeccCCeEEEEEEecccccCcCccceEEeeeeccccCcccchhhcCCCcEEE-EecCCEEEEecCCCh
Confidence 9999999999999994 223322 23788999999999997665 667889999999983
|
|
| >KOG2055|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.4e-24 Score=199.95 Aligned_cols=294 Identities=14% Similarity=0.137 Sum_probs=223.9
Q ss_pred CCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCC-EEEEecCC-eEEEEEcCCCce
Q psy12614 111 SGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGD-YLVTGCAA-AVRVWDIHKGHA 188 (708)
Q Consensus 111 ~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~-~l~~~~~d-~i~iwd~~~~~~ 188 (708)
.+.|+++.|+|....|++++.|+.++||.++...-...+.+.-...+|.+.+|.|+|+ .+++++.. .++.||+.+.+.
T Consensus 213 ~~~I~sv~FHp~~plllvaG~d~~lrifqvDGk~N~~lqS~~l~~fPi~~a~f~p~G~~~i~~s~rrky~ysyDle~ak~ 292 (514)
T KOG2055|consen 213 HGGITSVQFHPTAPLLLVAGLDGTLRIFQVDGKVNPKLQSIHLEKFPIQKAEFAPNGHSVIFTSGRRKYLYSYDLETAKV 292 (514)
T ss_pred cCCceEEEecCCCceEEEecCCCcEEEEEecCccChhheeeeeccCccceeeecCCCceEEEecccceEEEEeecccccc
Confidence 4789999999999999999999999999998654333355555578999999999999 88888888 999999988765
Q ss_pred EEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEecCCe
Q psy12614 189 IHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPT 267 (708)
Q Consensus 189 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~ 267 (708)
...-.... .....+.....++++. ++..+..|.|.+....+++.+.+++ -.+.|..++|+.|++.|++.+.+|.
T Consensus 293 ~k~~~~~g----~e~~~~e~FeVShd~~fia~~G~~G~I~lLhakT~eli~s~K-ieG~v~~~~fsSdsk~l~~~~~~Ge 367 (514)
T KOG2055|consen 293 TKLKPPYG----VEEKSMERFEVSHDSNFIAIAGNNGHIHLLHAKTKELITSFK-IEGVVSDFTFSSDSKELLASGGTGE 367 (514)
T ss_pred ccccCCCC----cccchhheeEecCCCCeEEEcccCceEEeehhhhhhhhheee-eccEEeeEEEecCCcEEEEEcCCce
Confidence 54332221 1145677888899996 8899999999999999999999887 5788999999999999999999999
Q ss_pred EEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEeCCEEEEEcCCCeEEEEeCCCCceeecCccCCCCceE
Q psy12614 268 VVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALHGNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPV 347 (708)
Q Consensus 268 i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~ 347 (708)
|.+||++. .. ....+ -.||.+
T Consensus 368 V~v~nl~~--------~~--------~~~rf--------------------~D~G~v----------------------- 388 (514)
T KOG2055|consen 368 VYVWNLRQ--------NS--------CLHRF--------------------VDDGSV----------------------- 388 (514)
T ss_pred EEEEecCC--------cc--------eEEEE--------------------eecCcc-----------------------
Confidence 99999987 21 11110 011111
Q ss_pred EEEcCCcEEEEEcCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEEEc-CCce
Q psy12614 348 SLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYST-ESCV 426 (708)
Q Consensus 348 ~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~-d~~i 426 (708)
.-++++.|++|.|+|+|+ .|.|
T Consensus 389 ---------------------------------------------------------~gts~~~S~ng~ylA~GS~~GiV 411 (514)
T KOG2055|consen 389 ---------------------------------------------------------HGTSLCISLNGSYLATGSDSGIV 411 (514)
T ss_pred ---------------------------------------------------------ceeeeeecCCCceEEeccCcceE
Confidence 125678889999999976 8999
Q ss_pred EEEEEEecCCcceeEEeecCCcccccceeEEEEEecCCCeEEEEecCCc--EEEecCCCeEEEEEecCCCCCccCcceEE
Q psy12614 427 RLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVLISADSTLLLAVSLNGP--LYIIDLSSLEIKYCVDPYKSNLMSDVISL 504 (708)
Q Consensus 427 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~~~~~dg~--i~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 504 (708)
-|||.++.-.....+.+..+..- ...|+++.|++|++.||.++.... +.-+...++.....++..... -..++|
T Consensus 412 NIYd~~s~~~s~~PkPik~~dNL--tt~Itsl~Fn~d~qiLAiaS~~~knalrLVHvPS~TVFsNfP~~n~~--vg~vtc 487 (514)
T KOG2055|consen 412 NIYDGNSCFASTNPKPIKTVDNL--TTAITSLQFNHDAQILAIASRVKKNALRLVHVPSCTVFSNFPTSNTK--VGHVTC 487 (514)
T ss_pred EEeccchhhccCCCCchhhhhhh--heeeeeeeeCcchhhhhhhhhccccceEEEeccceeeeccCCCCCCc--ccceEE
Confidence 99997652111111111112222 457888999999999999887665 555566666666666655544 678999
Q ss_pred EEECCCCcEEEEEecCCeEEEEECC
Q psy12614 505 VQMSECKQYIVCADRKSHVVIWKNG 529 (708)
Q Consensus 505 ~~~s~~~~~l~~~~~d~~i~iw~~~ 529 (708)
++|||.|-+||.|..+|.+.+|.+.
T Consensus 488 ~aFSP~sG~lAvGNe~grv~l~kL~ 512 (514)
T KOG2055|consen 488 MAFSPNSGYLAVGNEAGRVHLFKLH 512 (514)
T ss_pred EEecCCCceEEeecCCCceeeEeec
Confidence 9999999999999999999999863
|
|
| >KOG1274|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.7e-24 Score=214.92 Aligned_cols=248 Identities=14% Similarity=0.246 Sum_probs=214.6
Q ss_pred cCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCC-CeEEEEEecCCCCCcEEEEEEeCCEEEEEcCCCcEEEEECCCC
Q psy12614 23 APEPKVINCIACEPKSSRLAVSRADQSIEIWDISET-PHVDRVFIGDPLSNSIECLTWFNDRLFSGGLQGFVNEYDMRRL 101 (708)
Q Consensus 23 ~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~-~~~~~~~~~h~~~~~v~~l~~~~~~l~s~~~d~~i~vwd~~~~ 101 (708)
..|...-+.++|.|+|++|.+++.||.|++|+.... +... ++..+. ..|.+++-.+.+|++++.+++|.+|.+.++
T Consensus 10 yaht~G~t~i~~d~~gefi~tcgsdg~ir~~~~~sd~e~P~-ti~~~g--~~v~~ia~~s~~f~~~s~~~tv~~y~fps~ 86 (933)
T KOG1274|consen 10 YAHTGGLTLICYDPDGEFICTCGSDGDIRKWKTNSDEEEPE-TIDISG--ELVSSIACYSNHFLTGSEQNTVLRYKFPSG 86 (933)
T ss_pred hhccCceEEEEEcCCCCEEEEecCCCceEEeecCCcccCCc-hhhccC--ceeEEEeecccceEEeeccceEEEeeCCCC
Confidence 478899999999999999999999999999998876 4333 444466 889998888889999999999999999998
Q ss_pred eEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEE
Q psy12614 102 NIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRV 180 (708)
Q Consensus 102 ~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~i 180 (708)
..-..+....-++++++|+-+|+++|.|++|-.|++-+..+.... ..+.+|.++|.++.|+|.+++||+.+-| .|++
T Consensus 87 ~~~~iL~Rftlp~r~~~v~g~g~~iaagsdD~~vK~~~~~D~s~~--~~lrgh~apVl~l~~~p~~~fLAvss~dG~v~i 164 (933)
T KOG1274|consen 87 EEDTILARFTLPIRDLAVSGSGKMIAAGSDDTAVKLLNLDDSSQE--KVLRGHDAPVLQLSYDPKGNFLAVSSCDGKVQI 164 (933)
T ss_pred CccceeeeeeccceEEEEecCCcEEEeecCceeEEEEeccccchh--eeecccCCceeeeeEcCCCCEEEEEecCceEEE
Confidence 877777777789999999999999999999999999999988776 7899999999999999999999999999 9999
Q ss_pred EEcCCCceEEEEEecccCC-CCCceeEEEEEEccCC-EEEEEcCCCcEEEEeCCCCeeEEEee--ccccCeEEEEEeCCC
Q psy12614 181 WDIHKGHAIHKMSLDKSSK-FSKNTAVWCVAFCADF-TIITGDSGGFVRFWDGKTGVQWSDVK--THKKDILALTVSEDE 256 (708)
Q Consensus 181 wd~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~-~l~~~~~dg~i~~wd~~~~~~~~~~~--~~~~~i~~~~~s~~~ 256 (708)
||+.++.+...+..-.... |.....+..++|+|+| ++++...|+.|.+|+..++.....+. .+...+..++|+|+|
T Consensus 165 w~~~~~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la~~~~d~~Vkvy~r~~we~~f~Lr~~~~ss~~~~~~wsPnG 244 (933)
T KOG1274|consen 165 WDLQDGILSKTLTGVDKDNEFILSRICTRLAWHPKGGTLAVPPVDNTVKVYSRKGWELQFKLRDKLSSSKFSDLQWSPNG 244 (933)
T ss_pred EEcccchhhhhcccCCccccccccceeeeeeecCCCCeEEeeccCCeEEEEccCCceeheeecccccccceEEEEEcCCC
Confidence 9999998877765432111 1124556788999995 79999999999999999888877664 344559999999999
Q ss_pred CEEEEEecCCeEEEEEccC
Q psy12614 257 NYLYCAGVDPTVVCFQRTR 275 (708)
Q Consensus 257 ~~l~~~~~dg~i~iw~~~~ 275 (708)
+|||+++.||.|.+||.++
T Consensus 245 ~YiAAs~~~g~I~vWnv~t 263 (933)
T KOG1274|consen 245 KYIAASTLDGQILVWNVDT 263 (933)
T ss_pred cEEeeeccCCcEEEEeccc
Confidence 9999999999999999986
|
|
| >KOG0639|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.8e-25 Score=205.50 Aligned_cols=278 Identities=14% Similarity=0.285 Sum_probs=229.3
Q ss_pred cCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCC--CeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEEC
Q psy12614 23 APEPKVINCIACEPKSSRLAVSRADQSIEIWDISET--PHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDM 98 (708)
Q Consensus 23 ~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~--~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~ 98 (708)
..|..-|.++++|...+.+.+|+ .|-|+|||+... +.....+..-.-+.-|+++... |+.|++|++-.++.|||+
T Consensus 416 L~HGEvVcAvtIS~~trhVyTgG-kgcVKVWdis~pg~k~PvsqLdcl~rdnyiRSckL~pdgrtLivGGeastlsiWDL 494 (705)
T KOG0639|consen 416 LAHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISQPGNKSPVSQLDCLNRDNYIRSCKLLPDGRTLIVGGEASTLSIWDL 494 (705)
T ss_pred hccCcEEEEEEecCCcceeEecC-CCeEEEeeccCCCCCCccccccccCcccceeeeEecCCCceEEeccccceeeeeec
Confidence 46888999999999999999997 478999999752 2111133322113668887777 999999999999999999
Q ss_pred CCCeEe--EEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC
Q psy12614 99 RRLNIK--SSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA 176 (708)
Q Consensus 99 ~~~~~~--~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d 176 (708)
....+. ..+....-...+++.+||.+..++++.||.|.|||+.+..++ +.|.+|.+.+.||..++||..|-+|+.|
T Consensus 495 AapTprikaeltssapaCyALa~spDakvcFsccsdGnI~vwDLhnq~~V--rqfqGhtDGascIdis~dGtklWTGGlD 572 (705)
T KOG0639|consen 495 AAPTPRIKAELTSSAPACYALAISPDAKVCFSCCSDGNIAVWDLHNQTLV--RQFQGHTDGASCIDISKDGTKLWTGGLD 572 (705)
T ss_pred cCCCcchhhhcCCcchhhhhhhcCCccceeeeeccCCcEEEEEcccceee--ecccCCCCCceeEEecCCCceeecCCCc
Confidence 875543 344444567889999999999999999999999999999887 8999999999999999999999999999
Q ss_pred -eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeC
Q psy12614 177 -AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSE 254 (708)
Q Consensus 177 -~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~ 254 (708)
+|+.||+++++.+..... ...|.++.++|++. +++|-.++.+.+.... +.....+.-|..-|.++.|.+
T Consensus 573 ntvRcWDlregrqlqqhdF--------~SQIfSLg~cP~~dWlavGMens~vevlh~s-kp~kyqlhlheScVLSlKFa~ 643 (705)
T KOG0639|consen 573 NTVRCWDLREGRQLQQHDF--------SSQIFSLGYCPTGDWLAVGMENSNVEVLHTS-KPEKYQLHLHESCVLSLKFAY 643 (705)
T ss_pred cceeehhhhhhhhhhhhhh--------hhhheecccCCCccceeeecccCcEEEEecC-CccceeecccccEEEEEEecc
Confidence 999999999988877654 67799999999997 8899999999998864 444455667999999999999
Q ss_pred CCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEEEcCCCeEEEEeC
Q psy12614 255 DENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSGGLDSYLSLSYY 329 (708)
Q Consensus 255 ~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~~~d~~i~iw~~ 329 (708)
-|+++++.+.|+.+..|...- |. .+.. ......|.+..++ ..+++||+.|....+|.+
T Consensus 644 cGkwfvStGkDnlLnawrtPy--------Ga--------siFq-skE~SsVlsCDIS~ddkyIVTGSGdkkATVYeV 703 (705)
T KOG0639|consen 644 CGKWFVSTGKDNLLNAWRTPY--------GA--------SIFQ-SKESSSVLSCDISFDDKYIVTGSGDKKATVYEV 703 (705)
T ss_pred cCceeeecCchhhhhhccCcc--------cc--------ceee-ccccCcceeeeeccCceEEEecCCCcceEEEEE
Confidence 999999999999999999887 64 2222 2235678887777 889999999988877764
|
|
| >KOG2055|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=6.1e-24 Score=195.85 Aligned_cols=288 Identities=13% Similarity=0.154 Sum_probs=218.2
Q ss_pred CCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEeCCEEEEEcCCCcEEEEECCCCeEeE
Q psy12614 26 PKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWFNDRLFSGGLQGFVNEYDMRRLNIKS 105 (708)
Q Consensus 26 ~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~~~~l~s~~~d~~i~vwd~~~~~~~~ 105 (708)
.++|+++.|+|...+|.+|+.||+++||.++...- ..++
T Consensus 213 ~~~I~sv~FHp~~plllvaG~d~~lrifqvDGk~N-----------------------------------------~~lq 251 (514)
T KOG2055|consen 213 HGGITSVQFHPTAPLLLVAGLDGTLRIFQVDGKVN-----------------------------------------PKLQ 251 (514)
T ss_pred cCCceEEEecCCCceEEEecCCCcEEEEEecCccC-----------------------------------------hhhe
Confidence 35666666666666666666666666666553221 2233
Q ss_pred EEeecCCceEEEEEecCCC-EEEEEeCCCcEEEEEccCCcEEEEEeccccc-ccEEEEEECCCCCEEEEecCC-eEEEEE
Q psy12614 106 STAVTSGTCWCLSVHKKKR-LLAAGTEQGHINLFQISDEGLLYEKLLDRQQ-GRILCTAWHSSGDYLVTGCAA-AVRVWD 182 (708)
Q Consensus 106 ~~~~~~~~v~~~~~s~~~~-~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~-~~v~~~~~s~d~~~l~~~~~d-~i~iwd 182 (708)
.+.-...+|.+.+|.|+|. .+++++....++.||+.+.+......+.++. ..+.....+|++++|+..+.. .|.+..
T Consensus 252 S~~l~~fPi~~a~f~p~G~~~i~~s~rrky~ysyDle~ak~~k~~~~~g~e~~~~e~FeVShd~~fia~~G~~G~I~lLh 331 (514)
T KOG2055|consen 252 SIHLEKFPIQKAEFAPNGHSVIFTSGRRKYLYSYDLETAKVTKLKPPYGVEEKSMERFEVSHDSNFIAIAGNNGHIHLLH 331 (514)
T ss_pred eeeeccCccceeeecCCCceEEEecccceEEEEeeccccccccccCCCCcccchhheeEecCCCCeEEEcccCceEEeeh
Confidence 3344457899999999999 8889999999999999999887556666665 356788899999999999999 999999
Q ss_pred cCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCeeEEEeeccccCe--EEEEEeCCCCEE
Q psy12614 183 IHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDVKTHKKDI--LALTVSEDENYL 259 (708)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i--~~~~~s~~~~~l 259 (708)
..+++.+..++. .+.|..++|+.|++ +++.+.+|.|.+||++...++..+.. .+.| ++++.++++.+|
T Consensus 332 akT~eli~s~Ki--------eG~v~~~~fsSdsk~l~~~~~~GeV~v~nl~~~~~~~rf~D-~G~v~gts~~~S~ng~yl 402 (514)
T KOG2055|consen 332 AKTKELITSFKI--------EGVVSDFTFSSDSKELLASGGTGEVYVWNLRQNSCLHRFVD-DGSVHGTSLCISLNGSYL 402 (514)
T ss_pred hhhhhhhheeee--------ccEEeeEEEecCCcEEEEEcCCceEEEEecCCcceEEEEee-cCccceeeeeecCCCceE
Confidence 999999999976 78899999999996 88888899999999999988888763 3333 567778999999
Q ss_pred EEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEeCCEEEEEcCCCeEEEEeCCCCceeecCc
Q psy12614 260 YCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALHGNRLYSGGLDSYLSLSYYPPKTLVKYPC 339 (708)
Q Consensus 260 ~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~ 339 (708)
|+|+..|.|.|||.++ |..+. ...+|.
T Consensus 403 A~GS~~GiVNIYd~~s----~~~s~----------------~PkPik--------------------------------- 429 (514)
T KOG2055|consen 403 ATGSDSGIVNIYDGNS----CFAST----------------NPKPIK--------------------------------- 429 (514)
T ss_pred EeccCcceEEEeccch----hhccC----------------CCCchh---------------------------------
Confidence 9999999999999876 00000 000000
Q ss_pred cCCCCceEEEEcCCcEEEEEcCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEE
Q psy12614 340 TLAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVA 419 (708)
Q Consensus 340 ~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~ 419 (708)
....-...|+++.|+||+++||
T Consensus 430 ----------------------------------------------------------~~dNLtt~Itsl~Fn~d~qiLA 451 (514)
T KOG2055|consen 430 ----------------------------------------------------------TVDNLTTAITSLQFNHDAQILA 451 (514)
T ss_pred ----------------------------------------------------------hhhhhheeeeeeeeCcchhhhh
Confidence 0011235688999999999999
Q ss_pred EE-c--CCceEEEEEEecCCcceeEEeecCCcccc-cceeEEEEEecCCCeEEEEecCCc--EEEec
Q psy12614 420 YS-T--ESCVRLHSLDLDGDKPQISRIKNLPAPLF-KSIFTHVLISADSTLLLAVSLNGP--LYIID 480 (708)
Q Consensus 420 ~~-~--d~~i~i~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~s~d~~~l~~~~~dg~--i~~~~ 480 (708)
.+ . ...+++-.+.. +. . +..+|.... ...++|++|||.|-+||+|..+|. +|.+.
T Consensus 452 iaS~~~knalrLVHvPS--~T-V---FsNfP~~n~~vg~vtc~aFSP~sG~lAvGNe~grv~l~kL~ 512 (514)
T KOG2055|consen 452 IASRVKKNALRLVHVPS--CT-V---FSNFPTSNTKVGHVTCMAFSPNSGYLAVGNEAGRVHLFKLH 512 (514)
T ss_pred hhhhccccceEEEeccc--ee-e---eccCCCCCCcccceEEEEecCCCceEEeecCCCceeeEeec
Confidence 73 2 78899988875 22 2 233666554 778999999999999999999999 88764
|
|
| >KOG0264|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=9.6e-25 Score=201.38 Aligned_cols=245 Identities=14% Similarity=0.226 Sum_probs=200.1
Q ss_pred ccCCCCcEEEEEEcCCC-CEEEEEeCCCcEEEEeCCCCCeE---------EEEEecCCCCCcEEEEEEe---CCEEEEEc
Q psy12614 22 YAPEPKVINCIACEPKS-SRLAVSRADQSIEIWDISETPHV---------DRVFIGDPLSNSIECLTWF---NDRLFSGG 88 (708)
Q Consensus 22 ~~~h~~~v~~~~~s~~~-~~la~~~~dg~v~iwd~~~~~~~---------~~~~~~h~~~~~v~~l~~~---~~~l~s~~ 88 (708)
...|++.|+.+.+-|.. .++|+++..+.|.|||..+..-. ...+.||. ..=.+|+|+ ...|++++
T Consensus 120 ~i~h~gEVnRaRymPQnp~iVAt~t~~~dv~Vfd~tk~~s~~~~~~~~~Pdl~L~gH~--~eg~glsWn~~~~g~Lls~~ 197 (422)
T KOG0264|consen 120 KINHDGEVNRARYMPQNPNIVATKTSSGDVYVFDYTKHPSKPKASGECRPDLRLKGHE--KEGYGLSWNRQQEGTLLSGS 197 (422)
T ss_pred eccCCccchhhhhCCCCCcEEEecCCCCCEEEEEeccCCCcccccccCCCceEEEeec--ccccccccccccceeEeecc
Confidence 34699999999999966 56777888999999999763211 23788999 777889999 78999999
Q ss_pred CCCcEEEEECCCCe-------EeEEEeecCCceEEEEEecC-CCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEE
Q psy12614 89 LQGFVNEYDMRRLN-------IKSSTAVTSGTCWCLSVHKK-KRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILC 160 (708)
Q Consensus 89 ~d~~i~vwd~~~~~-------~~~~~~~~~~~v~~~~~s~~-~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~ 160 (708)
.|++|++||+.... +...+.+|...|..++|++- ..++++++.|+.+.|||.+++.........+|.+.|.|
T Consensus 198 ~d~~i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~~~~~~~~~~ah~~~vn~ 277 (422)
T KOG0264|consen 198 DDHTICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSNTSKPSHSVKAHSAEVNC 277 (422)
T ss_pred CCCcEEEEeccccccCCccccceEEeecCCcceehhhccccchhhheeecCCCeEEEEEcCCCCCCCcccccccCCceeE
Confidence 99999999987643 45678899999999999994 55788999999999999995333333678899999999
Q ss_pred EEECCCC-CEEEEecCC-eEEEEEcCCCce-EEEEEecccCCCCCceeEEEEEEccCCE--EEEEcCCCcEEEEeCCCC-
Q psy12614 161 TAWHSSG-DYLVTGCAA-AVRVWDIHKGHA-IHKMSLDKSSKFSKNTAVWCVAFCADFT--IITGDSGGFVRFWDGKTG- 234 (708)
Q Consensus 161 ~~~s~d~-~~l~~~~~d-~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~--l~~~~~dg~i~~wd~~~~- 234 (708)
++|+|-+ ..||+|+.| +|.+||+++... +..+. +|...|.++.|+|... |++++.|+.+.+||+..-
T Consensus 278 ~~fnp~~~~ilAT~S~D~tV~LwDlRnL~~~lh~~e-------~H~dev~~V~WSPh~etvLASSg~D~rl~vWDls~ig 350 (422)
T KOG0264|consen 278 VAFNPFNEFILATGSADKTVALWDLRNLNKPLHTFE-------GHEDEVFQVEWSPHNETVLASSGTDRRLNVWDLSRIG 350 (422)
T ss_pred EEeCCCCCceEEeccCCCcEEEeechhcccCceecc-------CCCcceEEEEeCCCCCceeEecccCCcEEEEeccccc
Confidence 9999955 667889989 999999998654 33333 5599999999999873 889999999999998642
Q ss_pred -------------eeEEEeeccccCeEEEEEeCCCCE-EEEEecCCeEEEEEccC
Q psy12614 235 -------------VQWSDVKTHKKDILALTVSEDENY-LYCAGVDPTVVCFQRTR 275 (708)
Q Consensus 235 -------------~~~~~~~~~~~~i~~~~~s~~~~~-l~~~~~dg~i~iw~~~~ 275 (708)
+++..-.||...|..+.|+|+..+ +++...|+.+.||++..
T Consensus 351 ~eq~~eda~dgppEllF~HgGH~~kV~DfsWnp~ePW~I~SvaeDN~LqIW~~s~ 405 (422)
T KOG0264|consen 351 EEQSPEDAEDGPPELLFIHGGHTAKVSDFSWNPNEPWTIASVAEDNILQIWQMAE 405 (422)
T ss_pred cccChhhhccCCcceeEEecCcccccccccCCCCCCeEEEEecCCceEEEeeccc
Confidence 223455689999999999998865 56788899999999875
|
|
| >KOG0646|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.2e-24 Score=197.44 Aligned_cols=293 Identities=18% Similarity=0.255 Sum_probs=223.3
Q ss_pred CCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe-CCEEEEEc-CCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCC
Q psy12614 47 DQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF-NDRLFSGG-LQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKR 124 (708)
Q Consensus 47 dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~-~~~l~s~~-~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~ 124 (708)
..++.+||+.+|..+. .+.+.. ...-.++.-- +.+++++. .-..|.+|.+...........-.++|.+++-+|+|.
T Consensus 17 ~~~~~~~dl~TGt~~~-~ykg~~-~a~~~sl~~l~~~yllsaq~~rp~l~vw~i~k~~~~~q~~v~Pg~v~al~s~n~G~ 94 (476)
T KOG0646|consen 17 PINCIVWDLRTGTSLL-QYKGSY-LAQAASLTALNNEYLLSAQLKRPLLHVWEILKKDQVVQYIVLPGPVHALASSNLGY 94 (476)
T ss_pred CcceeEEecCCCceeE-EecCcc-cccchhhhhhchhheeeecccCccccccccCchhhhhhhcccccceeeeecCCCce
Confidence 3569999999998776 555542 0233333333 66777665 455799999988666554444568999999999999
Q ss_pred EEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCC---------CceEEEEEe
Q psy12614 125 LLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHK---------GHAIHKMSL 194 (708)
Q Consensus 125 ~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~---------~~~~~~~~~ 194 (708)
+|+.|+..|.|++|.+.+|.++ ..+.+|-..|+++.|+.||.+|++++.| .|.+|.+.+ -+++..+.
T Consensus 95 ~l~ag~i~g~lYlWelssG~LL--~v~~aHYQ~ITcL~fs~dgs~iiTgskDg~V~vW~l~~lv~a~~~~~~~p~~~f~- 171 (476)
T KOG0646|consen 95 FLLAGTISGNLYLWELSSGILL--NVLSAHYQSITCLKFSDDGSHIITGSKDGAVLVWLLTDLVSADNDHSVKPLHIFS- 171 (476)
T ss_pred EEEeecccCcEEEEEeccccHH--HHHHhhccceeEEEEeCCCcEEEecCCCccEEEEEEEeecccccCCCccceeeec-
Confidence 9999989999999999999998 7789999999999999999999999999 999998742 12233332
Q ss_pred cccCCCCCceeEEEEEEccCC---EEEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEE
Q psy12614 195 DKSSKFSKNTAVWCVAFCADF---TIITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCF 271 (708)
Q Consensus 195 ~~~~~~~~~~~v~~~~~~~~~---~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw 271 (708)
.|.-+|+++...+.| ++++++.|.++++||+..|..+.++. ....+.+++.+|.++.+++|+.+|.|.+.
T Consensus 172 ------~HtlsITDl~ig~Gg~~~rl~TaS~D~t~k~wdlS~g~LLlti~-fp~si~av~lDpae~~~yiGt~~G~I~~~ 244 (476)
T KOG0646|consen 172 ------DHTLSITDLQIGSGGTNARLYTASEDRTIKLWDLSLGVLLLTIT-FPSSIKAVALDPAERVVYIGTEEGKIFQN 244 (476)
T ss_pred ------cCcceeEEEEecCCCccceEEEecCCceEEEEEeccceeeEEEe-cCCcceeEEEcccccEEEecCCcceEEee
Confidence 558999999888765 69999999999999999999988876 56889999999999999999999999999
Q ss_pred EccCCcccccCCCCCCCCcceEEeEEEecccc--ceEEEEEe--CCEEEEEcCCCeEEEEeCCCCceee-cCccCCCCce
Q psy12614 272 QRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEG--DVKSLALH--GNRLYSGGLDSYLSLSYYPPKTLVK-YPCTLAQSTP 346 (708)
Q Consensus 272 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~--~v~~l~~~--~~~l~s~~~d~~i~iw~~~~~~~~~-~~~~~~~~~~ 346 (708)
++...+.......+......-.....+.+|.+ .|++++++ |.+|++|+.||.+++||+...++-+ +.-....+..
T Consensus 245 ~~~~~~~~~~~v~~k~~~~~~t~~~~~~Gh~~~~~ITcLais~DgtlLlSGd~dg~VcvWdi~S~Q~iRtl~~~kgpVtn 324 (476)
T KOG0646|consen 245 LLFKLSGQSAGVNQKGRHEENTQINVLVGHENESAITCLAISTDGTLLLSGDEDGKVCVWDIYSKQCIRTLQTSKGPVTN 324 (476)
T ss_pred ehhcCCcccccccccccccccceeeeeccccCCcceeEEEEecCccEEEeeCCCCCEEEEecchHHHHHHHhhhccccce
Confidence 88773311110000000111225677889988 99999999 9999999999999999999877333 3212233444
Q ss_pred EEEEc
Q psy12614 347 VSLAK 351 (708)
Q Consensus 347 ~~~s~ 351 (708)
+.+.|
T Consensus 325 L~i~~ 329 (476)
T KOG0646|consen 325 LQINP 329 (476)
T ss_pred eEeec
Confidence 44433
|
|
| >KOG1332|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.5e-25 Score=186.89 Aligned_cols=249 Identities=16% Similarity=0.170 Sum_probs=201.3
Q ss_pred eecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcE-EEEEecccccccEEEEEECC--CCCEEEEecCC-eEEEEEc
Q psy12614 108 AVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGL-LYEKLLDRQQGRILCTAWHS--SGDYLVTGCAA-AVRVWDI 183 (708)
Q Consensus 108 ~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~-~~~~~~~~~~~~v~~~~~s~--d~~~l~~~~~d-~i~iwd~ 183 (708)
..|...|..+...--|++||+++.|++|+|+..+++.. .....+.+|.++|..++|.. -|..||+++.| .|.||.-
T Consensus 8 t~H~D~IHda~lDyygkrlATcsSD~tVkIf~v~~n~~s~ll~~L~Gh~GPVwqv~wahPk~G~iLAScsYDgkVIiWke 87 (299)
T KOG1332|consen 8 TQHEDMIHDAQLDYYGKRLATCSSDGTVKIFEVRNNGQSKLLAELTGHSGPVWKVAWAHPKFGTILASCSYDGKVIIWKE 87 (299)
T ss_pred hhhhhhhhHhhhhhhcceeeeecCCccEEEEEEcCCCCceeeeEecCCCCCeeEEeecccccCcEeeEeecCceEEEEec
Confidence 46888888888888899999999999999999986553 44588999999999999965 79999999999 9999998
Q ss_pred CCCceEEEEEecccCCCCCceeEEEEEEccCC---EEEEEcCCCcEEEEeCCCC---eeEEEeeccccCeEEEEEeCC--
Q psy12614 184 HKGHAIHKMSLDKSSKFSKNTAVWCVAFCADF---TIITGDSGGFVRFWDGKTG---VQWSDVKTHKKDILALTVSED-- 255 (708)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---~l~~~~~dg~i~~wd~~~~---~~~~~~~~~~~~i~~~~~s~~-- 255 (708)
++|+-.+..... .|...|++++|.|.+ .|+++++||.|.+.+.++. ...+...+|.-.|++++|.|.
T Consensus 88 ~~g~w~k~~e~~-----~h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~~g~w~t~ki~~aH~~GvnsVswapa~~ 162 (299)
T KOG1332|consen 88 ENGRWTKAYEHA-----AHSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDSSGGWTTSKIVFAHEIGVNSVSWAPASA 162 (299)
T ss_pred CCCchhhhhhhh-----hhcccceeecccccccceEEEEeeCCCcEEEEEEcCCCCccchhhhhccccccceeeecCcCC
Confidence 888443332222 459999999999977 3899999999999988654 223445789999999999986
Q ss_pred -C-----------CEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe------CCEEEE
Q psy12614 256 -E-----------NYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH------GNRLYS 317 (708)
Q Consensus 256 -~-----------~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~------~~~l~s 317 (708)
| ++|++|+.|..|+||+... + .|.....+.+|.+-|+.++|. ...+++
T Consensus 163 ~g~~~~~~~~~~~krlvSgGcDn~VkiW~~~~--------~------~w~~e~~l~~H~dwVRDVAwaP~~gl~~s~iAS 228 (299)
T KOG1332|consen 163 PGSLVDQGPAAKVKRLVSGGCDNLVKIWKFDS--------D------SWKLERTLEGHKDWVRDVAWAPSVGLPKSTIAS 228 (299)
T ss_pred CccccccCcccccceeeccCCccceeeeecCC--------c------chhhhhhhhhcchhhhhhhhccccCCCceeeEE
Confidence 4 6799999999999999988 4 587788899999999999998 468999
Q ss_pred EcCCCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEEEcCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEE
Q psy12614 318 GGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVK 397 (708)
Q Consensus 318 ~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (708)
++.||++.||..+... .. | -..
T Consensus 229 ~SqDg~viIwt~~~e~-e~------------------------------w---------------------------k~t 250 (299)
T KOG1332|consen 229 CSQDGTVIIWTKDEEY-EP------------------------------W---------------------------KKT 250 (299)
T ss_pred ecCCCcEEEEEecCcc-Cc------------------------------c---------------------------ccc
Confidence 9999999999775221 00 0 011
Q ss_pred EEecCCCceEEEEeCCCCcEEEEEc-CCceEEEEEEe
Q psy12614 398 MSAVNNATIRCSVVSNDGKYVAYST-ESCVRLHSLDL 433 (708)
Q Consensus 398 ~~~~~~~~i~~~~~s~~g~~l~~~~-d~~i~i~~~~~ 433 (708)
+.......+..+.||..|..|+++. |+.+.+|.-..
T Consensus 251 ll~~f~~~~w~vSWS~sGn~LaVs~GdNkvtlwke~~ 287 (299)
T KOG1332|consen 251 LLEEFPDVVWRVSWSLSGNILAVSGGDNKVTLWKENV 287 (299)
T ss_pred ccccCCcceEEEEEeccccEEEEecCCcEEEEEEeCC
Confidence 1123457788999999999999854 99999998664
|
|
| >KOG0639|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=6.7e-25 Score=203.88 Aligned_cols=275 Identities=18% Similarity=0.247 Sum_probs=212.5
Q ss_pred ecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEE-EEEeccc--ccccEEEEEECCCCCEEEEecCC-eEEEEEcC
Q psy12614 109 VTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLL-YEKLLDR--QQGRILCTAWHSSGDYLVTGCAA-AVRVWDIH 184 (708)
Q Consensus 109 ~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~-~~~~~~~--~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~ 184 (708)
.|+.-|.++++|...+++.+|+. |.|+|||+....-. ....+.. ....|.++...|||+.|++|+.- ++.|||+.
T Consensus 417 ~HGEvVcAvtIS~~trhVyTgGk-gcVKVWdis~pg~k~PvsqLdcl~rdnyiRSckL~pdgrtLivGGeastlsiWDLA 495 (705)
T KOG0639|consen 417 AHGEVVCAVTISNPTRHVYTGGK-GCVKVWDISQPGNKSPVSQLDCLNRDNYIRSCKLLPDGRTLIVGGEASTLSIWDLA 495 (705)
T ss_pred ccCcEEEEEEecCCcceeEecCC-CeEEEeeccCCCCCCccccccccCcccceeeeEecCCCceEEeccccceeeeeecc
Confidence 68889999999999999999876 77999999753211 1122222 35678999999999999999999 99999998
Q ss_pred CCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEe
Q psy12614 185 KGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAG 263 (708)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~ 263 (708)
......+.... ......++++.+||.+ .+++..||.|.|||+.+...++.+++|...+.|+.+++||..|.+|+
T Consensus 496 apTprikaelt-----ssapaCyALa~spDakvcFsccsdGnI~vwDLhnq~~VrqfqGhtDGascIdis~dGtklWTGG 570 (705)
T KOG0639|consen 496 APTPRIKAELT-----SSAPACYALAISPDAKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISKDGTKLWTGG 570 (705)
T ss_pred CCCcchhhhcC-----CcchhhhhhhcCCccceeeeeccCCcEEEEEcccceeeecccCCCCCceeEEecCCCceeecCC
Confidence 76554433332 1145567889999997 67888999999999999999999999999999999999999999999
Q ss_pred cCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEec--cccceEEEEEe--CCEEEEEcCCCeEEEEeCCCCceeecCc
Q psy12614 264 VDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVI--HEGDVKSLALH--GNRLYSGGLDSYLSLSYYPPKTLVKYPC 339 (708)
Q Consensus 264 ~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~--~~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~~~~~~~~~ 339 (708)
-|++++.||+++ +. .+.. ....|.++.++ +++++.|-..+.+.+.......
T Consensus 571 lDntvRcWDlre--------gr-----------qlqqhdF~SQIfSLg~cP~~dWlavGMens~vevlh~skp~------ 625 (705)
T KOG0639|consen 571 LDNTVRCWDLRE--------GR-----------QLQQHDFSSQIFSLGYCPTGDWLAVGMENSNVEVLHTSKPE------ 625 (705)
T ss_pred Cccceeehhhhh--------hh-----------hhhhhhhhhhheecccCCCccceeeecccCcEEEEecCCcc------
Confidence 999999999998 53 2222 24567777766 7777777777766554332211
Q ss_pred cCCCCceEEEEcCCcEEEEEcCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEE
Q psy12614 340 TLAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVA 419 (708)
Q Consensus 340 ~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~ 419 (708)
......|.+-|.++.|.+.|++++
T Consensus 626 --------------------------------------------------------kyqlhlheScVLSlKFa~cGkwfv 649 (705)
T KOG0639|consen 626 --------------------------------------------------------KYQLHLHESCVLSLKFAYCGKWFV 649 (705)
T ss_pred --------------------------------------------------------ceeecccccEEEEEEecccCceee
Confidence 111224678899999999999999
Q ss_pred E-EcCCceEEEEEEecCCcceeEEeecCCcccccceeEEEEEecCCCeEEEEecCCc--EEEe
Q psy12614 420 Y-STESCVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVLISADSTLLLAVSLNGP--LYII 479 (708)
Q Consensus 420 ~-~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~~~~~dg~--i~~~ 479 (708)
+ |.|+-+-.|....+... ++ .++ ..+|.++.+|.|.+++++|+.|.. ||.+
T Consensus 650 StGkDnlLnawrtPyGasi--Fq----skE---~SsVlsCDIS~ddkyIVTGSGdkkATVYeV 703 (705)
T KOG0639|consen 650 STGKDNLLNAWRTPYGASI--FQ----SKE---SSSVLSCDISFDDKYIVTGSGDKKATVYEV 703 (705)
T ss_pred ecCchhhhhhccCccccce--ee----ccc---cCcceeeeeccCceEEEecCCCcceEEEEE
Confidence 8 77999999998874332 22 222 347888999999999999999966 7765
|
|
| >KOG1036|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.5e-23 Score=181.44 Aligned_cols=272 Identities=17% Similarity=0.152 Sum_probs=208.7
Q ss_pred cccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEEEEcCCCcEEEEeCCC
Q psy12614 155 QGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKT 233 (708)
Q Consensus 155 ~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~wd~~~ 233 (708)
+..|.++.|+|.+..|++++.| .+++||+........+. +..++.+++|.++.++++|+.||.|+.+|+.+
T Consensus 13 ~d~IS~v~f~~~~~~LLvssWDgslrlYdv~~~~l~~~~~--------~~~plL~c~F~d~~~~~~G~~dg~vr~~Dln~ 84 (323)
T KOG1036|consen 13 EDGISSVKFSPSSSDLLVSSWDGSLRLYDVPANSLKLKFK--------HGAPLLDCAFADESTIVTGGLDGQVRRYDLNT 84 (323)
T ss_pred hhceeeEEEcCcCCcEEEEeccCcEEEEeccchhhhhhee--------cCCceeeeeccCCceEEEeccCceEEEEEecC
Confidence 5789999999999999999999 99999998876655553 38899999999999999999999999999988
Q ss_pred CeeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEeCC
Q psy12614 234 GVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALHGN 313 (708)
Q Consensus 234 ~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~~~ 313 (708)
+.... +..|...|.|+.+++....+++|+.|++|++||.+. .. ...-......|.++...++
T Consensus 85 ~~~~~-igth~~~i~ci~~~~~~~~vIsgsWD~~ik~wD~R~--------~~---------~~~~~d~~kkVy~~~v~g~ 146 (323)
T KOG1036|consen 85 GNEDQ-IGTHDEGIRCIEYSYEVGCVISGSWDKTIKFWDPRN--------KV---------VVGTFDQGKKVYCMDVSGN 146 (323)
T ss_pred Cccee-eccCCCceEEEEeeccCCeEEEcccCccEEEEeccc--------cc---------cccccccCceEEEEeccCC
Confidence 76644 455999999999999888999999999999999985 11 1111122347888888899
Q ss_pred EEEEEcCCCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEEEcCCeEEEEEecCCCCCCCCCCCCCCcccCCCCce
Q psy12614 314 RLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPR 393 (708)
Q Consensus 314 ~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (708)
.|+.|+.|..+.+||+++......
T Consensus 147 ~LvVg~~~r~v~iyDLRn~~~~~q-------------------------------------------------------- 170 (323)
T KOG1036|consen 147 RLVVGTSDRKVLIYDLRNLDEPFQ-------------------------------------------------------- 170 (323)
T ss_pred EEEEeecCceEEEEEcccccchhh--------------------------------------------------------
Confidence 999999999999999865431110
Q ss_pred EEEEEEecCCCceEEEEeCCCCcEEEEEc-CCceEEEEEEec----CCcceeEEeecCCcccc-cceeEEEEEecCCCeE
Q psy12614 394 LIVKMSAVNNATIRCSVVSNDGKYVAYST-ESCVRLHSLDLD----GDKPQISRIKNLPAPLF-KSIFTHVLISADSTLL 467 (708)
Q Consensus 394 ~~~~~~~~~~~~i~~~~~s~~g~~l~~~~-d~~i~i~~~~~~----~~~~~~~~~~~~~~~~~-~~~i~~~~~s~d~~~l 467 (708)
.........+.|+++-|++.-.++|+ +|.|.+=.++.. ..+..++-......... ..+|.+++|+|-...+
T Consensus 171 ---~reS~lkyqtR~v~~~pn~eGy~~sSieGRVavE~~d~s~~~~skkyaFkCHr~~~~~~~~~yPVNai~Fhp~~~tf 247 (323)
T KOG1036|consen 171 ---RRESSLKYQTRCVALVPNGEGYVVSSIEGRVAVEYFDDSEEAQSKKYAFKCHRLSEKDTEIIYPVNAIAFHPIHGTF 247 (323)
T ss_pred ---hccccceeEEEEEEEecCCCceEEEeecceEEEEccCCchHHhhhceeEEeeecccCCceEEEEeceeEeccccceE
Confidence 00012245678888888776666655 999888766653 12223332222233333 7789999999999999
Q ss_pred EEEecCCc--EEEecCCCeEEEEEecCCCCCccCcceEEEEECCCCcEEEEEe
Q psy12614 468 LAVSLNGP--LYIIDLSSLEIKYCVDPYKSNLMSDVISLVQMSECKQYIVCAD 518 (708)
Q Consensus 468 ~~~~~dg~--i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~ 518 (708)
|+|+.||. +|++... +.+..+... ...|..++|+.||..||+++
T Consensus 248 aTgGsDG~V~~Wd~~~r--Krl~q~~~~-----~~SI~slsfs~dG~~LAia~ 293 (323)
T KOG1036|consen 248 ATGGSDGIVNIWDLFNR--KRLKQLAKY-----ETSISSLSFSMDGSLLAIAS 293 (323)
T ss_pred EecCCCceEEEccCcch--hhhhhccCC-----CCceEEEEeccCCCeEEEEe
Confidence 99999999 8888766 555555443 45799999999999999996
|
|
| >KOG0267|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=6.1e-26 Score=220.32 Aligned_cols=236 Identities=17% Similarity=0.327 Sum_probs=214.9
Q ss_pred eeeeccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEE
Q psy12614 18 NIKFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNE 95 (708)
Q Consensus 18 ~~~~~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~v 95 (708)
..+.+..|...|.|+..-..++.+++|+.|-.+-+|.+.....+. .+.+|. .+|.++.|+ ...|++|+.+|+|++
T Consensus 20 ~~~~~~~hsaav~~lk~~~s~r~~~~Gg~~~k~~L~~i~kp~~i~-S~~~he--spIeSl~f~~~E~LlaagsasgtiK~ 96 (825)
T KOG0267|consen 20 DTREFVAHSAAVGCLKIRKSSRSLVTGGEDEKVNLWAIGKPNAIT-SLTGHE--SPIESLTFDTSERLLAAGSASGTIKV 96 (825)
T ss_pred cchhhhhhhhhhceeeeeccceeeccCCCceeeccccccCCchhh-eeeccC--CcceeeecCcchhhhcccccCCceee
Confidence 334567899999999998888999999999999999998876665 799999 999999999 777888899999999
Q ss_pred EECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecC
Q psy12614 96 YDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCA 175 (708)
Q Consensus 96 wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~ 175 (708)
||+++++.++++.+|...+.++.|+|-+.+.|.|+.|+.+++||++...+. ..+.+|...|..+.|+|+|.+++.++.
T Consensus 97 wDleeAk~vrtLtgh~~~~~sv~f~P~~~~~a~gStdtd~~iwD~Rk~Gc~--~~~~s~~~vv~~l~lsP~Gr~v~~g~e 174 (825)
T KOG0267|consen 97 WDLEEAKIVRTLTGHLLNITSVDFHPYGEFFASGSTDTDLKIWDIRKKGCS--HTYKSHTRVVDVLRLSPDGRWVASGGE 174 (825)
T ss_pred eehhhhhhhhhhhccccCcceeeeccceEEeccccccccceehhhhccCce--eeecCCcceeEEEeecCCCceeeccCC
Confidence 999999999999999999999999999999999999999999999977676 678889999999999999999999999
Q ss_pred C-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEe
Q psy12614 176 A-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVS 253 (708)
Q Consensus 176 d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s 253 (708)
| ++++||+..|+....+.. |+..+..+.|+|..- ++.|+.|+++++||+++.+.+.........|.+.+|+
T Consensus 175 d~tvki~d~~agk~~~ef~~-------~e~~v~sle~hp~e~Lla~Gs~d~tv~f~dletfe~I~s~~~~~~~v~~~~fn 247 (825)
T KOG0267|consen 175 DNTVKIWDLTAGKLSKEFKS-------HEGKVQSLEFHPLEVLLAPGSSDRTVRFWDLETFEVISSGKPETDGVRSLAFN 247 (825)
T ss_pred cceeeeeccccccccccccc-------ccccccccccCchhhhhccCCCCceeeeeccceeEEeeccCCccCCceeeeec
Confidence 9 999999999999988873 488899999999774 8899999999999999999999888888999999999
Q ss_pred CCCCEEEEEecC
Q psy12614 254 EDENYLYCAGVD 265 (708)
Q Consensus 254 ~~~~~l~~~~~d 265 (708)
|++..+++|...
T Consensus 248 ~~~~~~~~G~q~ 259 (825)
T KOG0267|consen 248 PDGKIVLSGEQI 259 (825)
T ss_pred CCceeeecCchh
Confidence 999988888665
|
|
| >TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.2e-22 Score=197.29 Aligned_cols=280 Identities=12% Similarity=0.093 Sum_probs=207.4
Q ss_pred CCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEE-EEEcCCCcEEEEECCCCeEeEEEeecCCce
Q psy12614 38 SSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRL-FSGGLQGFVNEYDMRRLNIKSSTAVTSGTC 114 (708)
Q Consensus 38 ~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l-~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v 114 (708)
++.+++++.|+.|.+||+.+++.+. .+.++. .+.+++|+ ++.+ ++++.++.|++||..+++....+..+.. +
T Consensus 1 ~~~~~s~~~d~~v~~~d~~t~~~~~-~~~~~~---~~~~l~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~-~ 75 (300)
T TIGR03866 1 EKAYVSNEKDNTISVIDTATLEVTR-TFPVGQ---RPRGITLSKDGKLLYVCASDSDTIQVIDLATGEVIGTLPSGPD-P 75 (300)
T ss_pred CcEEEEecCCCEEEEEECCCCceEE-EEECCC---CCCceEECCCCCEEEEEECCCCeEEEEECCCCcEEEeccCCCC-c
Confidence 3578899999999999999988766 666654 46789998 6666 5677899999999999988777765543 5
Q ss_pred EEEEEecCCCEEEEE-eCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC--eEEEEEcCCCceEEE
Q psy12614 115 WCLSVHKKKRLLAAG-TEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA--AVRVWDIHKGHAIHK 191 (708)
Q Consensus 115 ~~~~~s~~~~~la~~-~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d--~i~iwd~~~~~~~~~ 191 (708)
..++|+|+++.++++ +.++.|++||+.+++.+ ..+. +...+.+++|+|++++++++..+ .+.+||..+++....
T Consensus 76 ~~~~~~~~g~~l~~~~~~~~~l~~~d~~~~~~~--~~~~-~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~d~~~~~~~~~ 152 (300)
T TIGR03866 76 ELFALHPNGKILYIANEDDNLVTVIDIETRKVL--AEIP-VGVEPEGMAVSPDGKIVVNTSETTNMAHFIDTKTYEIVDN 152 (300)
T ss_pred cEEEECCCCCEEEEEcCCCCeEEEEECCCCeEE--eEee-CCCCcceEEECCCCCEEEEEecCCCeEEEEeCCCCeEEEE
Confidence 688999999987655 45899999999987765 3333 23346889999999999988876 577889988877665
Q ss_pred EEecccCCCCCceeEEEEEEccCCE-EE-EEcCCCcEEEEeCCCCeeEEEeeccc-------cCeEEEEEeCCCCEEEEE
Q psy12614 192 MSLDKSSKFSKNTAVWCVAFCADFT-II-TGDSGGFVRFWDGKTGVQWSDVKTHK-------KDILALTVSEDENYLYCA 262 (708)
Q Consensus 192 ~~~~~~~~~~~~~~v~~~~~~~~~~-l~-~~~~dg~i~~wd~~~~~~~~~~~~~~-------~~i~~~~~s~~~~~l~~~ 262 (708)
+.. ...+..++|+|+++ ++ ++..++.|.+||+++++.+..+..+. .....++|+|++++++++
T Consensus 153 ~~~--------~~~~~~~~~s~dg~~l~~~~~~~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~~~~~ 224 (300)
T TIGR03866 153 VLV--------DQRPRFAEFTADGKELWVSSEIGGTVSVIDVATRKVIKKITFEIPGVHPEAVQPVGIKLTKDGKTAFVA 224 (300)
T ss_pred EEc--------CCCccEEEECCCCCEEEEEcCCCCEEEEEEcCcceeeeeeeecccccccccCCccceEECCCCCEEEEE
Confidence 543 23356789999996 54 44568999999999998777664321 123468899999986554
Q ss_pred -ecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEEE-cCCCeEEEEeCCCCce-eec
Q psy12614 263 -GVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSG-GLDSYLSLSYYPPKTL-VKY 337 (708)
Q Consensus 263 -~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~-~~d~~i~iw~~~~~~~-~~~ 337 (708)
+.++.+.+||..+ ++ ..... .+...+.+++|+ +..|+++ +.++.|++||+.+... ..+
T Consensus 225 ~~~~~~i~v~d~~~--------~~--------~~~~~-~~~~~~~~~~~~~~g~~l~~~~~~~~~i~v~d~~~~~~~~~~ 287 (300)
T TIGR03866 225 LGPANRVAVVDAKT--------YE--------VLDYL-LVGQRVWQLAFTPDEKYLLTTNGVSNDVSVIDVAALKVIKSI 287 (300)
T ss_pred cCCCCeEEEEECCC--------Cc--------EEEEE-EeCCCcceEEECCCCCEEEEEcCCCCeEEEEECCCCcEEEEE
Confidence 4567899999987 54 22222 344578899998 7788776 5689999999998873 444
Q ss_pred CccCCCCceEEEEc
Q psy12614 338 PCTLAQSTPVSLAK 351 (708)
Q Consensus 338 ~~~~~~~~~~~~s~ 351 (708)
. ....+..++++|
T Consensus 288 ~-~~~~~~~~~~~~ 300 (300)
T TIGR03866 288 K-VGRLPWGVVVRP 300 (300)
T ss_pred E-cccccceeEeCC
Confidence 3 334445565543
|
Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol. |
| >KOG4283|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.9e-23 Score=178.76 Aligned_cols=303 Identities=15% Similarity=0.237 Sum_probs=218.0
Q ss_pred EeecCCceEEEEEec-CCCEEEEEeCCCcEEEEEccCCc------E-------EEEEecccccccEEEEEECCC-CCEEE
Q psy12614 107 TAVTSGTCWCLSVHK-KKRLLAAGTEQGHINLFQISDEG------L-------LYEKLLDRQQGRILCTAWHSS-GDYLV 171 (708)
Q Consensus 107 ~~~~~~~v~~~~~s~-~~~~la~~~~d~~i~iwd~~~~~------~-------~~~~~~~~~~~~v~~~~~s~d-~~~l~ 171 (708)
...|.+.|+++.+.+ .|+++++|+.||.|.+||+++.. + +......+|.-.|.++.|-|- .-.+.
T Consensus 39 ~r~HgGsvNsL~id~tegrymlSGgadgsi~v~Dl~n~t~~e~s~li~k~~c~v~~~h~~~Hky~iss~~WyP~DtGmFt 118 (397)
T KOG4283|consen 39 VRPHGGSVNSLQIDLTEGRYMLSGGADGSIAVFDLQNATDYEASGLIAKHKCIVAKQHENGHKYAISSAIWYPIDTGMFT 118 (397)
T ss_pred eccCCCccceeeeccccceEEeecCCCccEEEEEeccccchhhccceeheeeeccccCCccceeeeeeeEEeeecCceee
Confidence 347899999999988 68999999999999999998643 1 111233467888999999884 45677
Q ss_pred EecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCC----EEEEEcCCCcEEEEeCCCCeeEEEeeccccC
Q psy12614 172 TGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADF----TIITGDSGGFVRFWDGKTGVQWSDVKTHKKD 246 (708)
Q Consensus 172 ~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~----~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~ 246 (708)
+++-| ++++||.++.+....++. ++.|++-+++|-. .+++|..+-+|++-|+.+|....++.+|.+.
T Consensus 119 ssSFDhtlKVWDtnTlQ~a~~F~m--------e~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~SGs~sH~LsGHr~~ 190 (397)
T KOG4283|consen 119 SSSFDHTLKVWDTNTLQEAVDFKM--------EGKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIASGSFSHTLSGHRDG 190 (397)
T ss_pred cccccceEEEeecccceeeEEeec--------CceeehhhcChhhhcceEEEEecCCCcEEEEeccCCcceeeeccccCc
Confidence 78889 999999999888877765 6789999999854 2678888899999999999999999999999
Q ss_pred eEEEEEeCCCCE-EEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEeCCEEEEEcCCCeEE
Q psy12614 247 ILALTVSEDENY-LYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALHGNRLYSGGLDSYLS 325 (708)
Q Consensus 247 i~~~~~s~~~~~-l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~s~~~d~~i~ 325 (708)
|.++.|+|...+ |++|+.||.|++||++. - .|..+
T Consensus 191 vlaV~Wsp~~e~vLatgsaDg~irlWDiRr--------a------------------------------------sgcf~ 226 (397)
T KOG4283|consen 191 VLAVEWSPSSEWVLATGSADGAIRLWDIRR--------A------------------------------------SGCFR 226 (397)
T ss_pred eEEEEeccCceeEEEecCCCceEEEEEeec--------c------------------------------------cceeE
Confidence 999999998765 56889999999999987 1 12222
Q ss_pred EEeCCCCceeecCccCCCCceEEEEcCCcEEEEEcCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCc
Q psy12614 326 LSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNAT 405 (708)
Q Consensus 326 iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (708)
+.|..+. . . ....+....|.+.
T Consensus 227 ~lD~hn~----------------------------------------k-----------------~-~p~~~~n~ah~gk 248 (397)
T KOG4283|consen 227 VLDQHNT----------------------------------------K-----------------R-PPILKTNTAHYGK 248 (397)
T ss_pred EeecccC----------------------------------------c-----------------c-Cccccccccccce
Confidence 2222111 0 0 0122344578899
Q ss_pred eEEEEeCCCCcEEEE-EcCCceEEEEEEecCCcceeEEeecCCcccc-cceeEEEEEecCCCeEEEEecCCcEEEecCCC
Q psy12614 406 IRCSVVSNDGKYVAY-STESCVRLHSLDLDGDKPQISRIKNLPAPLF-KSIFTHVLISADSTLLLAVSLNGPLYIIDLSS 483 (708)
Q Consensus 406 i~~~~~s~~g~~l~~-~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~s~d~~~l~~~~~dg~i~~~~~~~ 483 (708)
+..++|+.||.++++ +.|..+++|+...+.. .+....+...... ...+. +. +.+...++..-.++.++.+...+
T Consensus 249 vngla~tSd~~~l~~~gtd~r~r~wn~~~G~n--tl~~~g~~~~n~~~~~~~~-~~-~~~s~vfv~~p~~~~lall~~~s 324 (397)
T KOG4283|consen 249 VNGLAWTSDARYLASCGTDDRIRVWNMESGRN--TLREFGPIIHNQTTSFAVH-IQ-SMDSDVFVLFPNDGSLALLNLLE 324 (397)
T ss_pred eeeeeecccchhhhhccCccceEEeecccCcc--cccccccccccccccceEE-Ee-ecccceEEEEecCCeEEEEEccC
Confidence 999999999999998 7799999999988443 3332221211111 11111 22 33334444344444455555555
Q ss_pred eEEEEEecCCCCCccCcceEEEEECCCCcEEEEEecCCeEEEEEC
Q psy12614 484 LEIKYCVDPYKSNLMSDVISLVQMSECKQYIVCADRKSHVVIWKN 528 (708)
Q Consensus 484 ~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~ 528 (708)
+..++.+.. | ...|.|.++-|+=+.+.+++.|+.|..|..
T Consensus 325 gs~ir~l~~---h--~k~i~c~~~~~~fq~~~tg~~d~ni~~w~p 364 (397)
T KOG4283|consen 325 GSFVRRLST---H--LKRINCAAYRPDFEQCFTGDMNGNIYMWSP 364 (397)
T ss_pred ceEEEeeec---c--cceeeEEeecCchhhhhccccCCccccccc
Confidence 566666654 3 557888888888888888888888888865
|
|
| >KOG0269|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=7.4e-25 Score=214.61 Aligned_cols=237 Identities=21% Similarity=0.344 Sum_probs=200.6
Q ss_pred EEEEEEcC-CCCEEEEEeCCCcEEEEeCCC---CCeEEEEEecCCCCCcEEEEEEe---CCEEEEEcCCCcEEEEECCCC
Q psy12614 29 INCIACEP-KSSRLAVSRADQSIEIWDISE---TPHVDRVFIGDPLSNSIECLTWF---NDRLFSGGLQGFVNEYDMRRL 101 (708)
Q Consensus 29 v~~~~~s~-~~~~la~~~~dg~v~iwd~~~---~~~~~~~~~~h~~~~~v~~l~~~---~~~l~s~~~d~~i~vwd~~~~ 101 (708)
+..+.|+. +.++||+++.+|.|.+||+.. .+.+. .|..|. ..++++.|+ .++|++|+.||+|++||+...
T Consensus 90 ~~DVkW~~~~~NlIAT~s~nG~i~vWdlnk~~rnk~l~-~f~EH~--Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR~~ 166 (839)
T KOG0269|consen 90 AADVKWGQLYSNLIATCSTNGVISVWDLNKSIRNKLLT-VFNEHE--RSANKLDFHSTEPNILISGSQDGTVKCWDLRSK 166 (839)
T ss_pred hhhcccccchhhhheeecCCCcEEEEecCccccchhhh-Hhhhhc--cceeeeeeccCCccEEEecCCCceEEEEeeecc
Confidence 34556653 467999999999999999987 44443 889999 999999999 899999999999999999999
Q ss_pred eEeEEEeecCCceEEEEEec-CCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEE
Q psy12614 102 NIKSSTAVTSGTCWCLSVHK-KKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVR 179 (708)
Q Consensus 102 ~~~~~~~~~~~~v~~~~~s~-~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~ 179 (708)
+...++.+....|+.+.|+| .+..++++.+.|.+.+||++....- ...+..|.++|.++.|+|++.+||+|++| +|+
T Consensus 167 ~S~~t~~~nSESiRDV~fsp~~~~~F~s~~dsG~lqlWDlRqp~r~-~~k~~AH~GpV~c~nwhPnr~~lATGGRDK~vk 245 (839)
T KOG0269|consen 167 KSKSTFRSNSESIRDVKFSPGYGNKFASIHDSGYLQLWDLRQPDRC-EKKLTAHNGPVLCLNWHPNREWLATGGRDKMVK 245 (839)
T ss_pred cccccccccchhhhceeeccCCCceEEEecCCceEEEeeccCchhH-HHHhhcccCceEEEeecCCCceeeecCCCccEE
Confidence 99999999999999999999 5778999999999999999866543 26788999999999999999999999999 999
Q ss_pred EEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE--EEEEcC--CCcEEEEeCCCCe-eEEEeeccccCeEEEEEeC
Q psy12614 180 VWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT--IITGDS--GGFVRFWDGKTGV-QWSDVKTHKKDILALTVSE 254 (708)
Q Consensus 180 iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--l~~~~~--dg~i~~wd~~~~~-~~~~~~~~~~~i~~~~~s~ 254 (708)
|||+.+++......... ..++.++.|-|+.+ |++++. |-.|+|||++..- +..++..|...++.++|..
T Consensus 246 iWd~t~~~~~~~~tInT------iapv~rVkWRP~~~~hLAtcsmv~dtsV~VWDvrRPYIP~~t~~eH~~~vt~i~W~~ 319 (839)
T KOG0269|consen 246 IWDMTDSRAKPKHTINT------IAPVGRVKWRPARSYHLATCSMVVDTSVHVWDVRRPYIPYATFLEHTDSVTGIAWDS 319 (839)
T ss_pred EEeccCCCccceeEEee------cceeeeeeeccCccchhhhhhccccceEEEEeeccccccceeeeccCccccceeccC
Confidence 99998777666555543 68899999999884 666554 6789999997653 4677889999999999965
Q ss_pred -CCCEEEEEecCCeEEEEEccC
Q psy12614 255 -DENYLYCAGVDPTVVCFQRTR 275 (708)
Q Consensus 255 -~~~~l~~~~~dg~i~iw~~~~ 275 (708)
|...+.+++.||.+..-.++.
T Consensus 320 ~d~~~l~s~sKD~tv~qh~~kn 341 (839)
T KOG0269|consen 320 GDRINLWSCSKDGTVLQHLFKN 341 (839)
T ss_pred CCceeeEeecCccHHHHhhhhc
Confidence 456788999999887665555
|
|
| >KOG4283|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=9.8e-23 Score=176.89 Aligned_cols=298 Identities=16% Similarity=0.301 Sum_probs=225.6
Q ss_pred Cccceeeee-eeeccCCCCcEEEEEEcC-CCCEEEEEeCCCcEEEEeCCCCCe------EE--------EEEecCCCCCc
Q psy12614 10 TMGTYGVHN-IKFYAPEPKVINCIACEP-KSSRLAVSRADQSIEIWDISETPH------VD--------RVFIGDPLSNS 73 (708)
Q Consensus 10 ~~~~~~~~~-~~~~~~h~~~v~~~~~s~-~~~~la~~~~dg~v~iwd~~~~~~------~~--------~~~~~h~~~~~ 73 (708)
.+..+++.. ..|...|.+.|+++.+.+ .|+|+++|+.||.|.+||+++... +. ..-.+|+ -.
T Consensus 26 Ril~L~Ln~d~d~~r~HgGsvNsL~id~tegrymlSGgadgsi~v~Dl~n~t~~e~s~li~k~~c~v~~~h~~~Hk--y~ 103 (397)
T KOG4283|consen 26 RILSLQLNNDKDFVRPHGGSVNSLQIDLTEGRYMLSGGADGSIAVFDLQNATDYEASGLIAKHKCIVAKQHENGHK--YA 103 (397)
T ss_pred hhheeeccCCcceeccCCCccceeeeccccceEEeecCCCccEEEEEeccccchhhccceeheeeeccccCCccce--ee
Confidence 344455533 457789999999999988 689999999999999999986331 11 1233677 88
Q ss_pred EEEEEEe---CCEEEEEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEecC---CCEEEEEeCCCcEEEEEccCCcEEE
Q psy12614 74 IECLTWF---NDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKK---KRLLAAGTEQGHINLFQISDEGLLY 147 (708)
Q Consensus 74 v~~l~~~---~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~---~~~la~~~~d~~i~iwd~~~~~~~~ 147 (708)
|..+.|- ...+.+++.|.++++||..+.+....++- .+.|.+-++||- ..++|+|..+-.|++-|+..|...
T Consensus 104 iss~~WyP~DtGmFtssSFDhtlKVWDtnTlQ~a~~F~m-e~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~SGs~s- 181 (397)
T KOG4283|consen 104 ISSAIWYPIDTGMFTSSSFDHTLKVWDTNTLQEAVDFKM-EGKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIASGSFS- 181 (397)
T ss_pred eeeeEEeeecCceeecccccceEEEeecccceeeEEeec-CceeehhhcChhhhcceEEEEecCCCcEEEEeccCCcce-
Confidence 9999998 67888999999999999999888777763 477888889883 457889999999999999999997
Q ss_pred EEecccccccEEEEEECCCCCEE-EEecCC-eEEEEEcCCC-ceEEEEEecccC-------CCCCceeEEEEEEccCCE-
Q psy12614 148 EKLLDRQQGRILCTAWHSSGDYL-VTGCAA-AVRVWDIHKG-HAIHKMSLDKSS-------KFSKNTAVWCVAFCADFT- 216 (708)
Q Consensus 148 ~~~~~~~~~~v~~~~~s~d~~~l-~~~~~d-~i~iwd~~~~-~~~~~~~~~~~~-------~~~~~~~v~~~~~~~~~~- 216 (708)
..+.+|.+.|.++.|+|...++ ++|+.| .|++||++.- .+...+...... ...|.+.+..++|+.|+.
T Consensus 182 -H~LsGHr~~vlaV~Wsp~~e~vLatgsaDg~irlWDiRrasgcf~~lD~hn~k~~p~~~~n~ah~gkvngla~tSd~~~ 260 (397)
T KOG4283|consen 182 -HTLSGHRDGVLAVEWSPSSEWVLATGSADGAIRLWDIRRASGCFRVLDQHNTKRPPILKTNTAHYGKVNGLAWTSDARY 260 (397)
T ss_pred -eeeccccCceEEEEeccCceeEEEecCCCceEEEEEeecccceeEEeecccCccCccccccccccceeeeeeecccchh
Confidence 8999999999999999998765 688889 9999999754 333333322200 014588899999999995
Q ss_pred EEEEcCCCcEEEEeCCCCeeEEEee---ccccCe---EEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCc
Q psy12614 217 IITGDSGGFVRFWDGKTGVQWSDVK---THKKDI---LALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSS 290 (708)
Q Consensus 217 l~~~~~dg~i~~wd~~~~~~~~~~~---~~~~~i---~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~ 290 (708)
+++++.|..+++|+..+|+....-. .|+..+ .-+. +.+...++---.++.+.++++-. |.
T Consensus 261 l~~~gtd~r~r~wn~~~G~ntl~~~g~~~~n~~~~~~~~~~-~~~s~vfv~~p~~~~lall~~~s--------gs----- 326 (397)
T KOG4283|consen 261 LASCGTDDRIRVWNMESGRNTLREFGPIIHNQTTSFAVHIQ-SMDSDVFVLFPNDGSLALLNLLE--------GS----- 326 (397)
T ss_pred hhhccCccceEEeecccCcccccccccccccccccceEEEe-ecccceEEEEecCCeEEEEEccC--------ce-----
Confidence 9999999999999998885422110 111110 1122 33334455455568999999988 76
Q ss_pred ceEEeEEEeccccceEEEEEe--CCEEEEEcCCCeEEEEeC
Q psy12614 291 VWVRSVNRVIHEGDVKSLALH--GNRLYSGGLDSYLSLSYY 329 (708)
Q Consensus 291 ~~~~~~~~~~~~~~v~~l~~~--~~~l~s~~~d~~i~iw~~ 329 (708)
.+..+..|-..|.+.++. =+...++..|+.+..|..
T Consensus 327 ---~ir~l~~h~k~i~c~~~~~~fq~~~tg~~d~ni~~w~p 364 (397)
T KOG4283|consen 327 ---FVRRLSTHLKRINCAAYRPDFEQCFTGDMNGNIYMWSP 364 (397)
T ss_pred ---EEEeeecccceeeEEeecCchhhhhccccCCccccccc
Confidence 778888897778877776 346788999999999876
|
|
| >KOG1273|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=9.6e-23 Score=178.71 Aligned_cols=272 Identities=13% Similarity=0.154 Sum_probs=208.5
Q ss_pred eEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEE
Q psy12614 114 CWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKM 192 (708)
Q Consensus 114 v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~ 192 (708)
-.|+.|++.|.+||+|+.||.|.|||+.+.... +.+.+|-.+|.+++||+||+.|++++.| .|.+||+..|.+++++
T Consensus 26 a~~~~Fs~~G~~lAvGc~nG~vvI~D~~T~~ia--r~lsaH~~pi~sl~WS~dgr~LltsS~D~si~lwDl~~gs~l~ri 103 (405)
T KOG1273|consen 26 AECCQFSRWGDYLAVGCANGRVVIYDFDTFRIA--RMLSAHVRPITSLCWSRDGRKLLTSSRDWSIKLWDLLKGSPLKRI 103 (405)
T ss_pred cceEEeccCcceeeeeccCCcEEEEEccccchh--hhhhccccceeEEEecCCCCEeeeecCCceeEEEeccCCCceeEE
Confidence 778999999999999999999999999998865 7899999999999999999999999999 9999999999999998
Q ss_pred EecccCCCCCceeEEEEEEccCC--EEEEEcCCCcEEEEeCCCCeeEEEeec-----cccCeEEEEEeCCCCEEEEEecC
Q psy12614 193 SLDKSSKFSKNTAVWCVAFCADF--TIITGDSGGFVRFWDGKTGVQWSDVKT-----HKKDILALTVSEDENYLYCAGVD 265 (708)
Q Consensus 193 ~~~~~~~~~~~~~v~~~~~~~~~--~l~~~~~dg~i~~wd~~~~~~~~~~~~-----~~~~i~~~~~s~~~~~l~~~~~d 265 (708)
.. ..+|+.+.|+|.. +.++.-.+..-.+-++..++.. .+.. ....-.+..|.+.|+++++|...
T Consensus 104 rf--------~spv~~~q~hp~k~n~~va~~~~~sp~vi~~s~~~h~-~Lp~d~d~dln~sas~~~fdr~g~yIitGtsK 174 (405)
T KOG1273|consen 104 RF--------DSPVWGAQWHPRKRNKCVATIMEESPVVIDFSDPKHS-VLPKDDDGDLNSSASHGVFDRRGKYIITGTSK 174 (405)
T ss_pred Ec--------cCccceeeeccccCCeEEEEEecCCcEEEEecCCcee-eccCCCccccccccccccccCCCCEEEEecCc
Confidence 76 6889999999965 3444444444445554433221 1110 11112234688999999999999
Q ss_pred CeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccc-cceEEEEEe--CCEEEEEcCCCeEEEEeCCCCce--------
Q psy12614 266 PTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHE-GDVKSLALH--GNRLYSGGLDSYLSLSYYPPKTL-------- 334 (708)
Q Consensus 266 g~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~~~~-------- 334 (708)
|.+.+++..+ -+ ....++-.. ..|..+.++ |+.|+..+.|..||.|++..-..
T Consensus 175 Gkllv~~a~t--------~e--------~vas~rits~~~IK~I~~s~~g~~liiNtsDRvIR~ye~~di~~~~r~~e~e 238 (405)
T KOG1273|consen 175 GKLLVYDAET--------LE--------CVASFRITSVQAIKQIIVSRKGRFLIINTSDRVIRTYEISDIDDEGRDGEVE 238 (405)
T ss_pred ceEEEEecch--------he--------eeeeeeechheeeeEEEEeccCcEEEEecCCceEEEEehhhhcccCccCCcC
Confidence 9999999988 32 333343333 678888888 99999999999999999873221
Q ss_pred --eecCc--cCCCCceEEEEcCCcEEEEE--cCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCC-CceE
Q psy12614 335 --VKYPC--TLAQSTPVSLAKDIQHVLLQ--YTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNN-ATIR 407 (708)
Q Consensus 335 --~~~~~--~~~~~~~~~~s~~~~~l~~~--~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~ 407 (708)
.++.. ...+-..+.||.+|.+++++ ....+++|....+. +.++..+.. ....
T Consensus 239 ~~~K~qDvVNk~~Wk~ccfs~dgeYv~a~s~~aHaLYIWE~~~Gs---------------------LVKILhG~kgE~l~ 297 (405)
T KOG1273|consen 239 PEHKLQDVVNKLQWKKCCFSGDGEYVCAGSARAHALYIWEKSIGS---------------------LVKILHGTKGEELL 297 (405)
T ss_pred hhHHHHHHHhhhhhhheeecCCccEEEeccccceeEEEEecCCcc---------------------eeeeecCCchhhee
Confidence 11110 11223578999999999985 55679999988766 555555555 5667
Q ss_pred EEEeCCCCcEEEEEcCCceEEEEEEe
Q psy12614 408 CSVVSNDGKYVAYSTESCVRLHSLDL 433 (708)
Q Consensus 408 ~~~~s~~g~~l~~~~d~~i~i~~~~~ 433 (708)
.+.|+|-...+++-..|.+++|....
T Consensus 298 DV~whp~rp~i~si~sg~v~iw~~~~ 323 (405)
T KOG1273|consen 298 DVNWHPVRPIIASIASGVVYIWAVVQ 323 (405)
T ss_pred ecccccceeeeeeccCCceEEEEeec
Confidence 88999988888877899999999875
|
|
| >KOG0646|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=1e-23 Score=194.97 Aligned_cols=246 Identities=15% Similarity=0.224 Sum_probs=202.1
Q ss_pred CEEEEEe-CCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECCCCeEeEEEeecCCceE
Q psy12614 39 SRLAVSR-ADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCW 115 (708)
Q Consensus 39 ~~la~~~-~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~ 115 (708)
.+++++. .-..|.+|.+....... ...- +.++|.+++-+ |.+|+.|+..|.|++|.+.+|+.+..+..|-..|+
T Consensus 51 ~yllsaq~~rp~l~vw~i~k~~~~~-q~~v--~Pg~v~al~s~n~G~~l~ag~i~g~lYlWelssG~LL~v~~aHYQ~IT 127 (476)
T KOG0646|consen 51 EYLLSAQLKRPLLHVWEILKKDQVV-QYIV--LPGPVHALASSNLGYFLLAGTISGNLYLWELSSGILLNVLSAHYQSIT 127 (476)
T ss_pred hheeeecccCccccccccCchhhhh-hhcc--cccceeeeecCCCceEEEeecccCcEEEEEeccccHHHHHHhhcccee
Confidence 4666653 34579999998754433 1111 23889999988 88888888999999999999999999999999999
Q ss_pred EEEEecCCCEEEEEeCCCcEEEEEcc-------CCcEEEEEecccccccEEEEEECCC--CCEEEEecCC-eEEEEEcCC
Q psy12614 116 CLSVHKKKRLLAAGTEQGHINLFQIS-------DEGLLYEKLLDRQQGRILCTAWHSS--GDYLVTGCAA-AVRVWDIHK 185 (708)
Q Consensus 116 ~~~~s~~~~~la~~~~d~~i~iwd~~-------~~~~~~~~~~~~~~~~v~~~~~s~d--~~~l~~~~~d-~i~iwd~~~ 185 (708)
|+.|+.||.+|++|+.||.|.+|++. +....+...+..|.-+|+++...+. ..+|++++.| ++++||+..
T Consensus 128 cL~fs~dgs~iiTgskDg~V~vW~l~~lv~a~~~~~~~p~~~f~~HtlsITDl~ig~Gg~~~rl~TaS~D~t~k~wdlS~ 207 (476)
T KOG0646|consen 128 CLKFSDDGSHIITGSKDGAVLVWLLTDLVSADNDHSVKPLHIFSDHTLSITDLQIGSGGTNARLYTASEDRTIKLWDLSL 207 (476)
T ss_pred EEEEeCCCcEEEecCCCccEEEEEEEeecccccCCCccceeeeccCcceeEEEEecCCCccceEEEecCCceEEEEEecc
Confidence 99999999999999999999999874 2234445788899999999988765 4789999999 999999999
Q ss_pred CceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCC----------------CeeEEEeecccc--C
Q psy12614 186 GHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKT----------------GVQWSDVKTHKK--D 246 (708)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~----------------~~~~~~~~~~~~--~ 246 (708)
|..+.++.. ...+.+++..|-++ +.+|+.+|.|.+.++.. +..+..+.+|.+ .
T Consensus 208 g~LLlti~f--------p~si~av~lDpae~~~yiGt~~G~I~~~~~~~~~~~~~~v~~k~~~~~~t~~~~~~Gh~~~~~ 279 (476)
T KOG0646|consen 208 GVLLLTITF--------PSSIKAVALDPAERVVYIGTEEGKIFQNLLFKLSGQSAGVNQKGRHEENTQINVLVGHENESA 279 (476)
T ss_pred ceeeEEEec--------CCcceeEEEcccccEEEecCCcceEEeeehhcCCcccccccccccccccceeeeeccccCCcc
Confidence 999998876 57799999999885 88999999999887643 234556778888 9
Q ss_pred eEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe
Q psy12614 247 ILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH 311 (708)
Q Consensus 247 i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~ 311 (708)
|+|++++-||++|++|+.||.+.+||..+ .+ .++.+....++|+.+.+.
T Consensus 280 ITcLais~DgtlLlSGd~dg~VcvWdi~S--------~Q--------~iRtl~~~kgpVtnL~i~ 328 (476)
T KOG0646|consen 280 ITCLAISTDGTLLLSGDEDGKVCVWDIYS--------KQ--------CIRTLQTSKGPVTNLQIN 328 (476)
T ss_pred eeEEEEecCccEEEeeCCCCCEEEEecch--------HH--------HHHHHhhhccccceeEee
Confidence 99999999999999999999999999987 33 334444356778877774
|
|
| >TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.3e-21 Score=191.10 Aligned_cols=264 Identities=13% Similarity=0.149 Sum_probs=195.2
Q ss_pred CCEEEEEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEE-EEEeCCCcEEEEEccCCcEEEEEecccccccEE
Q psy12614 81 NDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLL-AAGTEQGHINLFQISDEGLLYEKLLDRQQGRIL 159 (708)
Q Consensus 81 ~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l-a~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~ 159 (708)
++.+++++.|+.|++||+.+++.+..+..+. .+.+++|+|+++.+ ++++.++.|++||..+++.. ..+..+.. +.
T Consensus 1 ~~~~~s~~~d~~v~~~d~~t~~~~~~~~~~~-~~~~l~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~--~~~~~~~~-~~ 76 (300)
T TIGR03866 1 EKAYVSNEKDNTISVIDTATLEVTRTFPVGQ-RPRGITLSKDGKLLYVCASDSDTIQVIDLATGEVI--GTLPSGPD-PE 76 (300)
T ss_pred CcEEEEecCCCEEEEEECCCCceEEEEECCC-CCCceEECCCCCEEEEEECCCCeEEEEECCCCcEE--EeccCCCC-cc
Confidence 3568899999999999999999888887654 46789999999976 56677899999999988875 34444333 56
Q ss_pred EEEECCCCCEEEEec-CC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCC-cEEEEeCCCCe
Q psy12614 160 CTAWHSSGDYLVTGC-AA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGG-FVRFWDGKTGV 235 (708)
Q Consensus 160 ~~~~s~d~~~l~~~~-~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg-~i~~wd~~~~~ 235 (708)
.++|+|+++.+++++ .+ .+++||+.+++.+..+.. ...+.+++|+|+|. ++++..++ .+.+||..+++
T Consensus 77 ~~~~~~~g~~l~~~~~~~~~l~~~d~~~~~~~~~~~~--------~~~~~~~~~~~dg~~l~~~~~~~~~~~~~d~~~~~ 148 (300)
T TIGR03866 77 LFALHPNGKILYIANEDDNLVTVIDIETRKVLAEIPV--------GVEPEGMAVSPDGKIVVNTSETTNMAHFIDTKTYE 148 (300)
T ss_pred EEEECCCCCEEEEEcCCCCeEEEEECCCCeEEeEeeC--------CCCcceEEECCCCCEEEEEecCCCeEEEEeCCCCe
Confidence 789999999886654 46 999999998887766643 23357899999996 66666554 57788998887
Q ss_pred eEEEeeccccCeEEEEEeCCCCEEEEE-ecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEecc-----cc--ceEE
Q psy12614 236 QWSDVKTHKKDILALTVSEDENYLYCA-GVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIH-----EG--DVKS 307 (708)
Q Consensus 236 ~~~~~~~~~~~i~~~~~s~~~~~l~~~-~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-----~~--~v~~ 307 (708)
....+. ....+..++|+|++++|+++ ..++.|++||+.+ ++ ....+..+ .. ....
T Consensus 149 ~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~v~i~d~~~--------~~--------~~~~~~~~~~~~~~~~~~~~~ 211 (300)
T TIGR03866 149 IVDNVL-VDQRPRFAEFTADGKELWVSSEIGGTVSVIDVAT--------RK--------VIKKITFEIPGVHPEAVQPVG 211 (300)
T ss_pred EEEEEE-cCCCccEEEECCCCCEEEEEcCCCCEEEEEEcCc--------ce--------eeeeeeecccccccccCCccc
Confidence 766554 23456789999999988655 4589999999988 53 22222211 11 2345
Q ss_pred EEEe--CCEEE-EEcCCCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEEE--cCCeEEEEEecCCC
Q psy12614 308 LALH--GNRLY-SGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQ--YTSHLELWSLGSAQ 373 (708)
Q Consensus 308 l~~~--~~~l~-s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~--~~~~i~i~~~~~~~ 373 (708)
++++ ++.++ +.+.++.+.+||+.+...............++++|+|+.|+++ .++.|.+||..+++
T Consensus 212 i~~s~dg~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~i~v~d~~~~~ 282 (300)
T TIGR03866 212 IKLTKDGKTAFVALGPANRVAVVDAKTYEVLDYLLVGQRVWQLAFTPDEKYLLTTNGVSNDVSVIDVAALK 282 (300)
T ss_pred eEECCCCCEEEEEcCCCCeEEEEECCCCcEEEEEEeCCCcceEEECCCCCEEEEEcCCCCeEEEEECCCCc
Confidence 6677 66644 4456778999999887654432233456789999999998874 57899999999866
|
Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol. |
| >KOG2445|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.2e-22 Score=174.32 Aligned_cols=248 Identities=14% Similarity=0.258 Sum_probs=194.0
Q ss_pred eccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCC---CeEEEEEecCCCCCcEEEEEEe----CCEEEEEcCCCcE
Q psy12614 21 FYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISET---PHVDRVFIGDPLSNSIECLTWF----NDRLFSGGLQGFV 93 (708)
Q Consensus 21 ~~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~---~~~~~~~~~h~~~~~v~~l~~~----~~~l~s~~~d~~i 93 (708)
+-.+|.+-|+|+.|.+-|+++|+|+.|++|+|||.... .........|. +.|..+.|. |+.+|+++.|+++
T Consensus 8 i~s~h~DlihdVs~D~~GRRmAtCSsDq~vkI~d~~~~s~~W~~Ts~Wrah~--~Si~rV~WAhPEfGqvvA~cS~Drtv 85 (361)
T KOG2445|consen 8 IDSGHKDLIHDVSFDFYGRRMATCSSDQTVKIWDSTSDSGTWSCTSSWRAHD--GSIWRVVWAHPEFGQVVATCSYDRTV 85 (361)
T ss_pred cccCCcceeeeeeecccCceeeeccCCCcEEEEeccCCCCceEEeeeEEecC--CcEEEEEecCccccceEEEEecCCce
Confidence 45689999999999999999999999999999996542 33444788899 999999998 9999999999999
Q ss_pred EEEECCCC---------eEeEEEeecCCceEEEEEecC--CCEEEEEeCCCcEEEEEccCCcEE----EEE-------ec
Q psy12614 94 NEYDMRRL---------NIKSSTAVTSGTCWCLSVHKK--KRLLAAGTEQGHINLFQISDEGLL----YEK-------LL 151 (708)
Q Consensus 94 ~vwd~~~~---------~~~~~~~~~~~~v~~~~~s~~--~~~la~~~~d~~i~iwd~~~~~~~----~~~-------~~ 151 (708)
.||.-... ....++....+.|+.+.|.|. |-.||+++.||.+|||+.-..--. ... ..
T Consensus 86 ~iWEE~~~~~~~~~~~Wv~~ttl~DsrssV~DV~FaP~hlGLklA~~~aDG~lRIYEA~dp~nLs~W~Lq~Ei~~~~~pp 165 (361)
T KOG2445|consen 86 SIWEEQEKSEEAHGRRWVRRTTLVDSRSSVTDVKFAPKHLGLKLAAASADGILRIYEAPDPMNLSQWTLQHEIQNVIDPP 165 (361)
T ss_pred eeeeecccccccccceeEEEEEeecCCcceeEEEecchhcceEEEEeccCcEEEEEecCCccccccchhhhhhhhccCCc
Confidence 99975221 234566677889999999995 678999999999999987542111 001 12
Q ss_pred ccccccEEEEEECCC---CCEEEEecCC------eEEEEEcCCCc-eEEEEEecccCCCCCceeEEEEEEccCC-----E
Q psy12614 152 DRQQGRILCTAWHSS---GDYLVTGCAA------AVRVWDIHKGH-AIHKMSLDKSSKFSKNTAVWCVAFCADF-----T 216 (708)
Q Consensus 152 ~~~~~~v~~~~~s~d---~~~l~~~~~d------~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~-----~ 216 (708)
..+..+..|+.|+|. ..+||.|+.+ .++||....+. .......-. ++..+|++++|.|+- .
T Consensus 166 ~~~~~~~~CvsWn~sr~~~p~iAvgs~e~a~~~~~~~Iye~~e~~rKw~kva~L~----d~~dpI~di~wAPn~Gr~y~~ 241 (361)
T KOG2445|consen 166 GKNKQPCFCVSWNPSRMHEPLIAVGSDEDAPHLNKVKIYEYNENGRKWLKVAELP----DHTDPIRDISWAPNIGRSYHL 241 (361)
T ss_pred ccccCcceEEeeccccccCceEEEEcccCCccccceEEEEecCCcceeeeehhcC----CCCCcceeeeeccccCCceee
Confidence 245677889999975 4688888876 68888765433 333322221 459999999999964 2
Q ss_pred EEEEcCCCcEEEEeCCCC--------------------eeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccC
Q psy12614 217 IITGDSGGFVRFWDGKTG--------------------VQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTR 275 (708)
Q Consensus 217 l~~~~~dg~i~~wd~~~~--------------------~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~ 275 (708)
+++++.|| |+||.+... +.+..+..|++.|..+.|+-.|..|.+.+.||.+++|...-
T Consensus 242 lAvA~kDg-v~I~~v~~~~s~i~~ee~~~~~~~~~l~v~~vs~~~~H~~~VWrv~wNmtGtiLsStGdDG~VRLWkany 319 (361)
T KOG2445|consen 242 LAVATKDG-VRIFKVKVARSAIEEEEVLAPDLMTDLPVEKVSELDDHNGEVWRVRWNMTGTILSSTGDDGCVRLWKANY 319 (361)
T ss_pred EEEeecCc-EEEEEEeeccchhhhhcccCCCCccccceEEeeeccCCCCceEEEEEeeeeeEEeecCCCceeeehhhhh
Confidence 88999999 999998631 23445678999999999999999999999999999998764
|
|
| >KOG0264|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=9.1e-23 Score=188.41 Aligned_cols=256 Identities=16% Similarity=0.219 Sum_probs=200.8
Q ss_pred ecCCCCCcEEEEEEe---CCEEEEEcCCCcEEEEECCCC----------eEeEEEeecCCceEEEEEecCCC-EEEEEeC
Q psy12614 66 IGDPLSNSIECLTWF---NDRLFSGGLQGFVNEYDMRRL----------NIKSSTAVTSGTCWCLSVHKKKR-LLAAGTE 131 (708)
Q Consensus 66 ~~h~~~~~v~~l~~~---~~~l~s~~~d~~i~vwd~~~~----------~~~~~~~~~~~~v~~~~~s~~~~-~la~~~~ 131 (708)
..|. +.|+.+.+. ...+++.+..+.|.|||..+- ++...+.+|...=.+++|++... .|++++.
T Consensus 121 i~h~--gEVnRaRymPQnp~iVAt~t~~~dv~Vfd~tk~~s~~~~~~~~~Pdl~L~gH~~eg~glsWn~~~~g~Lls~~~ 198 (422)
T KOG0264|consen 121 INHD--GEVNRARYMPQNPNIVATKTSSGDVYVFDYTKHPSKPKASGECRPDLRLKGHEKEGYGLSWNRQQEGTLLSGSD 198 (422)
T ss_pred ccCC--ccchhhhhCCCCCcEEEecCCCCCEEEEEeccCCCcccccccCCCceEEEeecccccccccccccceeEeeccC
Confidence 3566 888888887 667888899999999997652 22337889998888899999644 7899999
Q ss_pred CCcEEEEEccCCc-----EEEEEecccccccEEEEEECCCC-CEEEEecCC-eEEEEEcCCC--ceEEEEEecccCCCCC
Q psy12614 132 QGHINLFQISDEG-----LLYEKLLDRQQGRILCTAWHSSG-DYLVTGCAA-AVRVWDIHKG--HAIHKMSLDKSSKFSK 202 (708)
Q Consensus 132 d~~i~iwd~~~~~-----~~~~~~~~~~~~~v~~~~~s~d~-~~l~~~~~d-~i~iwd~~~~--~~~~~~~~~~~~~~~~ 202 (708)
|+.|++||+.... ......+.+|...|..++|++-. ..+++++.| .+.|||.+++ +...... .|
T Consensus 199 d~~i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~~~~~~~~~~-------ah 271 (422)
T KOG0264|consen 199 DHTICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSNTSKPSHSVK-------AH 271 (422)
T ss_pred CCcEEEEeccccccCCccccceEEeecCCcceehhhccccchhhheeecCCCeEEEEEcCCCCCCCccccc-------cc
Confidence 9999999998533 33446788999999999999865 566788888 9999999963 2222222 45
Q ss_pred ceeEEEEEEccCC--EEEEEcCCCcEEEEeCCCC-eeEEEeeccccCeEEEEEeCCC-CEEEEEecCCeEEEEEccCCcc
Q psy12614 203 NTAVWCVAFCADF--TIITGDSGGFVRFWDGKTG-VQWSDVKTHKKDILALTVSEDE-NYLYCAGVDPTVVCFQRTRKPQ 278 (708)
Q Consensus 203 ~~~v~~~~~~~~~--~l~~~~~dg~i~~wd~~~~-~~~~~~~~~~~~i~~~~~s~~~-~~l~~~~~dg~i~iw~~~~~~~ 278 (708)
...++|++|+|-+ -|++|+.|++|++||+++. +++.++.+|...|.++.|+|.. ..|++++.|+.+.+||+.....
T Consensus 272 ~~~vn~~~fnp~~~~ilAT~S~D~tV~LwDlRnL~~~lh~~e~H~dev~~V~WSPh~etvLASSg~D~rl~vWDls~ig~ 351 (422)
T KOG0264|consen 272 SAEVNCVAFNPFNEFILATGSADKTVALWDLRNLNKPLHTFEGHEDEVFQVEWSPHNETVLASSGTDRRLNVWDLSRIGE 351 (422)
T ss_pred CCceeEEEeCCCCCceEEeccCCCcEEEeechhcccCceeccCCCcceEEEEeCCCCCceeEecccCCcEEEEecccccc
Confidence 9999999999966 3889999999999999875 5688899999999999999975 6788999999999999986211
Q ss_pred cccCCCCCCCCcceEEeEEEeccccceEEEEEe---CCEEEEEcCCCeEEEEeCCCC
Q psy12614 279 VCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH---GNRLYSGGLDSYLSLSYYPPK 332 (708)
Q Consensus 279 ~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~---~~~l~s~~~d~~i~iw~~~~~ 332 (708)
.... ++....+...+..-.||...|..+.|+ .-.+++.+.|+.+.||.+...
T Consensus 352 eq~~--eda~dgppEllF~HgGH~~kV~DfsWnp~ePW~I~SvaeDN~LqIW~~s~~ 406 (422)
T KOG0264|consen 352 EQSP--EDAEDGPPELLFIHGGHTAKVSDFSWNPNEPWTIASVAEDNILQIWQMAEN 406 (422)
T ss_pred ccCh--hhhccCCcceeEEecCcccccccccCCCCCCeEEEEecCCceEEEeecccc
Confidence 1100 000122333456678999999999999 668899999999999998643
|
|
| >KOG1273|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.8e-22 Score=177.00 Aligned_cols=272 Identities=14% Similarity=0.174 Sum_probs=208.6
Q ss_pred EEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECCCCeEeEE
Q psy12614 29 INCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMRRLNIKSS 106 (708)
Q Consensus 29 v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~~~~~~ 106 (708)
..|+.|++.|.+||+|+.||.|.|||+.+...- +.+.+|. .+|.+++|| |+.|++++.|..|.+||+..|.+++.
T Consensus 26 a~~~~Fs~~G~~lAvGc~nG~vvI~D~~T~~ia-r~lsaH~--~pi~sl~WS~dgr~LltsS~D~si~lwDl~~gs~l~r 102 (405)
T KOG1273|consen 26 AECCQFSRWGDYLAVGCANGRVVIYDFDTFRIA-RMLSAHV--RPITSLCWSRDGRKLLTSSRDWSIKLWDLLKGSPLKR 102 (405)
T ss_pred cceEEeccCcceeeeeccCCcEEEEEccccchh-hhhhccc--cceeEEEecCCCCEeeeecCCceeEEEeccCCCceeE
Confidence 789999999999999999999999999997754 4999999 999999999 99999999999999999999999888
Q ss_pred EeecCCceEEEEEecCCCEEEEE-eCCCcEEEEEccCCcEEEEEecccc-----cccEEEEEECCCCCEEEEecCC-eEE
Q psy12614 107 TAVTSGTCWCLSVHKKKRLLAAG-TEQGHINLFQISDEGLLYEKLLDRQ-----QGRILCTAWHSSGDYLVTGCAA-AVR 179 (708)
Q Consensus 107 ~~~~~~~v~~~~~s~~~~~la~~-~~d~~i~iwd~~~~~~~~~~~~~~~-----~~~v~~~~~s~d~~~l~~~~~d-~i~ 179 (708)
+.. ..+|+...|+|.....+.+ --+..-.+-++..+... .+... ...-.+..|.+.|+++++|... .+.
T Consensus 103 irf-~spv~~~q~hp~k~n~~va~~~~~sp~vi~~s~~~h~---~Lp~d~d~dln~sas~~~fdr~g~yIitGtsKGkll 178 (405)
T KOG1273|consen 103 IRF-DSPVWGAQWHPRKRNKCVATIMEESPVVIDFSDPKHS---VLPKDDDGDLNSSASHGVFDRRGKYIITGTSKGKLL 178 (405)
T ss_pred EEc-cCccceeeeccccCCeEEEEEecCCcEEEEecCCcee---eccCCCccccccccccccccCCCCEEEEecCcceEE
Confidence 874 5799999999965433333 23444556666554332 12111 1122334688999999999999 999
Q ss_pred EEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCC-------ee--EEEee--ccccCe
Q psy12614 180 VWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTG-------VQ--WSDVK--THKKDI 247 (708)
Q Consensus 180 iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~-------~~--~~~~~--~~~~~i 247 (708)
++|.++.+++..++... ...|..+.++..|+ ++.-+.|..|+.|+++.- +. .+.+. -....-
T Consensus 179 v~~a~t~e~vas~rits------~~~IK~I~~s~~g~~liiNtsDRvIR~ye~~di~~~~r~~e~e~~~K~qDvVNk~~W 252 (405)
T KOG1273|consen 179 VYDAETLECVASFRITS------VQAIKQIIVSRKGRFLIINTSDRVIRTYEISDIDDEGRDGEVEPEHKLQDVVNKLQW 252 (405)
T ss_pred EEecchheeeeeeeech------heeeeEEEEeccCcEEEEecCCceEEEEehhhhcccCccCCcChhHHHHHHHhhhhh
Confidence 99999999999888752 47899999999996 889999999999997621 11 11111 012344
Q ss_pred EEEEEeCCCCEEEEEec-CCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccc-cceEEEEEe--CCEEEEEcCCCe
Q psy12614 248 LALTVSEDENYLYCAGV-DPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHE-GDVKSLALH--GNRLYSGGLDSY 323 (708)
Q Consensus 248 ~~~~~s~~~~~l~~~~~-dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~v~~l~~~--~~~l~s~~~d~~ 323 (708)
.+++|+.+|.+++.++. ...++||.... |. ..+.+.+.. .....+.|+ ...+++. ..|.
T Consensus 253 k~ccfs~dgeYv~a~s~~aHaLYIWE~~~--------Gs--------LVKILhG~kgE~l~DV~whp~rp~i~si-~sg~ 315 (405)
T KOG1273|consen 253 KKCCFSGDGEYVCAGSARAHALYIWEKSI--------GS--------LVKILHGTKGEELLDVNWHPVRPIIASI-ASGV 315 (405)
T ss_pred hheeecCCccEEEeccccceeEEEEecCC--------cc--------eeeeecCCchhheeecccccceeeeeec-cCCc
Confidence 67899999999987764 45799999998 76 666676666 346677788 4445544 7899
Q ss_pred EEEEeCC
Q psy12614 324 LSLSYYP 330 (708)
Q Consensus 324 i~iw~~~ 330 (708)
+++|...
T Consensus 316 v~iw~~~ 322 (405)
T KOG1273|consen 316 VYIWAVV 322 (405)
T ss_pred eEEEEee
Confidence 9999874
|
|
| >KOG2445|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.4e-21 Score=169.60 Aligned_cols=264 Identities=14% Similarity=0.175 Sum_probs=199.1
Q ss_pred EEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECCCC----eEeEEEeecCCceEEEEEec--CCCEEEEEeCCCcE
Q psy12614 64 VFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMRRL----NIKSSTAVTSGTCWCLSVHK--KKRLLAAGTEQGHI 135 (708)
Q Consensus 64 ~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~----~~~~~~~~~~~~v~~~~~s~--~~~~la~~~~d~~i 135 (708)
.-.+|. .-|.++.|. |+++|+|+.|++|+|||.... .+....+.|.+.|+.+.|.+ -|+.+|+++.|+++
T Consensus 8 i~s~h~--DlihdVs~D~~GRRmAtCSsDq~vkI~d~~~~s~~W~~Ts~Wrah~~Si~rV~WAhPEfGqvvA~cS~Drtv 85 (361)
T KOG2445|consen 8 IDSGHK--DLIHDVSFDFYGRRMATCSSDQTVKIWDSTSDSGTWSCTSSWRAHDGSIWRVVWAHPEFGQVVATCSYDRTV 85 (361)
T ss_pred cccCCc--ceeeeeeecccCceeeeccCCCcEEEEeccCCCCceEEeeeEEecCCcEEEEEecCccccceEEEEecCCce
Confidence 456788 899999999 999999999999999996543 36677889999999999976 58999999999999
Q ss_pred EEEEccC-------CcEEEEEecccccccEEEEEECCC--CCEEEEecCC-eEEEEEcCCCceEEEEEeccc------CC
Q psy12614 136 NLFQISD-------EGLLYEKLLDRQQGRILCTAWHSS--GDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKS------SK 199 (708)
Q Consensus 136 ~iwd~~~-------~~~~~~~~~~~~~~~v~~~~~s~d--~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~------~~ 199 (708)
.||.-.. .+.+...++......|+.+.|.|. |-.||+++.| .++||+.-+.-.+......+. ..
T Consensus 86 ~iWEE~~~~~~~~~~~Wv~~ttl~DsrssV~DV~FaP~hlGLklA~~~aDG~lRIYEA~dp~nLs~W~Lq~Ei~~~~~pp 165 (361)
T KOG2445|consen 86 SIWEEQEKSEEAHGRRWVRRTTLVDSRSSVTDVKFAPKHLGLKLAAASADGILRIYEAPDPMNLSQWTLQHEIQNVIDPP 165 (361)
T ss_pred eeeeecccccccccceeEEEEEeecCCcceeEEEecchhcceEEEEeccCcEEEEEecCCccccccchhhhhhhhccCCc
Confidence 9998631 234445667777889999999985 6788999999 999999765443333322210 00
Q ss_pred CCCceeEEEEEEccCC---E-EEEEcCC-----CcEEEEeCCCC----eeEEEeeccccCeEEEEEeCCC----CEEEEE
Q psy12614 200 FSKNTAVWCVAFCADF---T-IITGDSG-----GFVRFWDGKTG----VQWSDVKTHKKDILALTVSEDE----NYLYCA 262 (708)
Q Consensus 200 ~~~~~~v~~~~~~~~~---~-l~~~~~d-----g~i~~wd~~~~----~~~~~~~~~~~~i~~~~~s~~~----~~l~~~ 262 (708)
-.+..+..|+.|+|.. . +++|+.+ +.+.||....+ ..+.++.+|..+|+.++|.|+- ..||++
T Consensus 166 ~~~~~~~~CvsWn~sr~~~p~iAvgs~e~a~~~~~~~Iye~~e~~rKw~kva~L~d~~dpI~di~wAPn~Gr~y~~lAvA 245 (361)
T KOG2445|consen 166 GKNKQPCFCVSWNPSRMHEPLIAVGSDEDAPHLNKVKIYEYNENGRKWLKVAELPDHTDPIRDISWAPNIGRSYHLLAVA 245 (361)
T ss_pred ccccCcceEEeeccccccCceEEEEcccCCccccceEEEEecCCcceeeeehhcCCCCCcceeeeeccccCCceeeEEEe
Confidence 0236778899999755 2 5555544 47888876544 2456678999999999999964 678999
Q ss_pred ecCCeEEEEEccCCcccc----cCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEEEcCCCeEEEEeCC
Q psy12614 263 GVDPTVVCFQRTRKPQVC----STSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSGGLDSYLSLSYYP 330 (708)
Q Consensus 263 ~~dg~i~iw~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~ 330 (708)
+.|| |+||.+...-... ...+......+...+..+..|.+.|..+.|+ |..|.+.|.||.||+|...
T Consensus 246 ~kDg-v~I~~v~~~~s~i~~ee~~~~~~~~~l~v~~vs~~~~H~~~VWrv~wNmtGtiLsStGdDG~VRLWkan 318 (361)
T KOG2445|consen 246 TKDG-VRIFKVKVARSAIEEEEVLAPDLMTDLPVEKVSELDDHNGEVWRVRWNMTGTILSSTGDDGCVRLWKAN 318 (361)
T ss_pred ecCc-EEEEEEeeccchhhhhcccCCCCccccceEEeeeccCCCCceEEEEEeeeeeEEeecCCCceeeehhhh
Confidence 9999 9999998511000 0001111224455667788999999999999 9999999999999999764
|
|
| >KOG0269|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.1e-23 Score=202.52 Aligned_cols=281 Identities=14% Similarity=0.258 Sum_probs=219.4
Q ss_pred CCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeE---EEEEecCC-CCCcEEEEEEe---CCEEEEEcCCCcEEEEEC
Q psy12614 26 PKVINCIACEPKSSRLAVSRADQSIEIWDISETPHV---DRVFIGDP-LSNSIECLTWF---NDRLFSGGLQGFVNEYDM 98 (708)
Q Consensus 26 ~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~---~~~~~~h~-~~~~v~~l~~~---~~~l~s~~~d~~i~vwd~ 98 (708)
.+...+++..++-..|+.++.. .++||.+...... ...+.+.. ..-.+..+.|. .++||+++..|.|.+||+
T Consensus 39 k~~~nAIs~nr~~~qiv~AGrs-~lklyai~~~~~~~~~~~~~k~kqn~~~S~~DVkW~~~~~NlIAT~s~nG~i~vWdl 117 (839)
T KOG0269|consen 39 KAKANAISVNRDINQIVVAGRS-LLKLYAINPNDFSEKCNHRFKTKQNKFYSAADVKWGQLYSNLIATCSTNGVISVWDL 117 (839)
T ss_pred ccccceEeecCCcceeEEeccc-ceeeEeeCcccCCcceeeecccccceeeehhhcccccchhhhheeecCCCcEEEEec
Confidence 4567788889999889988765 7889888753221 11111111 11355667887 899999999999999999
Q ss_pred CC---CeEeEEEeecCCceEEEEEecC-CCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCC-CCEEEEe
Q psy12614 99 RR---LNIKSSTAVTSGTCWCLSVHKK-KRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSS-GDYLVTG 173 (708)
Q Consensus 99 ~~---~~~~~~~~~~~~~v~~~~~s~~-~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d-~~~l~~~ 173 (708)
.. .+++..+..|...+.++.|++- -.+|++|+.||.|++||++..+-. .++.+....|..+.|+|. +.+++++
T Consensus 118 nk~~rnk~l~~f~EH~Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR~~~S~--~t~~~nSESiRDV~fsp~~~~~F~s~ 195 (839)
T KOG0269|consen 118 NKSIRNKLLTVFNEHERSANKLDFHSTEPNILISGSQDGTVKCWDLRSKKSK--STFRSNSESIRDVKFSPGYGNKFASI 195 (839)
T ss_pred CccccchhhhHhhhhccceeeeeeccCCccEEEecCCCceEEEEeeeccccc--ccccccchhhhceeeccCCCceEEEe
Confidence 88 5677788999999999999985 457889999999999999987766 677778899999999995 5677777
Q ss_pred cCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCee--EEEeeccccCeEE
Q psy12614 174 CAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQ--WSDVKTHKKDILA 249 (708)
Q Consensus 174 ~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~--~~~~~~~~~~i~~ 249 (708)
... .+++||++....-..... .|.++|.|+.|+|++. |++|+.|+.|+|||..+++. +.++. ...++.+
T Consensus 196 ~dsG~lqlWDlRqp~r~~~k~~------AH~GpV~c~nwhPnr~~lATGGRDK~vkiWd~t~~~~~~~~tIn-Tiapv~r 268 (839)
T KOG0269|consen 196 HDSGYLQLWDLRQPDRCEKKLT------AHNGPVLCLNWHPNREWLATGGRDKMVKIWDMTDSRAKPKHTIN-TIAPVGR 268 (839)
T ss_pred cCCceEEEeeccCchhHHHHhh------cccCceEEEeecCCCceeeecCCCccEEEEeccCCCccceeEEe-ecceeee
Confidence 777 999999986543322222 3499999999999875 99999999999999986643 33333 4578999
Q ss_pred EEEeCCCCE-EEEEe--cCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe---CCEEEEEcCCCe
Q psy12614 250 LTVSEDENY-LYCAG--VDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH---GNRLYSGGLDSY 323 (708)
Q Consensus 250 ~~~s~~~~~-l~~~~--~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~---~~~l~s~~~d~~ 323 (708)
+.|-|+.++ |++++ .|-.|++||++. ++++...+..|...++.++|. ...+.+++.|++
T Consensus 269 VkWRP~~~~hLAtcsmv~dtsV~VWDvrR---------------PYIP~~t~~eH~~~vt~i~W~~~d~~~l~s~sKD~t 333 (839)
T KOG0269|consen 269 VKWRPARSYHLATCSMVVDTSVHVWDVRR---------------PYIPYATFLEHTDSVTGIAWDSGDRINLWSCSKDGT 333 (839)
T ss_pred eeeccCccchhhhhhccccceEEEEeecc---------------ccccceeeeccCccccceeccCCCceeeEeecCccH
Confidence 999998755 44443 377999999987 567888999999999999998 467889999998
Q ss_pred EEEEeCCC
Q psy12614 324 LSLSYYPP 331 (708)
Q Consensus 324 i~iw~~~~ 331 (708)
+..-.+++
T Consensus 334 v~qh~~kn 341 (839)
T KOG0269|consen 334 VLQHLFKN 341 (839)
T ss_pred HHHhhhhc
Confidence 86554443
|
|
| >KOG4328|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.8e-22 Score=183.99 Aligned_cols=297 Identities=14% Similarity=0.194 Sum_probs=219.6
Q ss_pred CCccceeeeeeeeccCCCCcEEEEEEcCCC--CEEEEEeCCCcEEEEeCCCC---CeEEEEEecCCCCCcEEEEEEe---
Q psy12614 9 NTMGTYGVHNIKFYAPEPKVINCIACEPKS--SRLAVSRADQSIEIWDISET---PHVDRVFIGDPLSNSIECLTWF--- 80 (708)
Q Consensus 9 ~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~--~~la~~~~dg~v~iwd~~~~---~~~~~~~~~h~~~~~v~~l~~~--- 80 (708)
..+.-+....+.....+++.|++++|+|.. +++|+|..-|.|-+||+.+. ..-...+.+|. .+|.+|.|+
T Consensus 169 ~dl~l~~~~~~~v~kv~~~Rit~l~fHPt~~~~lva~GdK~G~VG~Wn~~~~~~d~d~v~~f~~hs--~~Vs~l~F~P~n 246 (498)
T KOG4328|consen 169 FDLDLDDYRILNVAKVTDRRITSLAFHPTENRKLVAVGDKGGQVGLWNFGTQEKDKDGVYLFTPHS--GPVSGLKFSPAN 246 (498)
T ss_pred cccccccceecceeEecccceEEEEecccCcceEEEEccCCCcEEEEecCCCCCccCceEEeccCC--ccccceEecCCC
Confidence 344445566677888999999999999965 58999999999999999532 12223788888 999999999
Q ss_pred CCEEEEEcCCCcEEEEECCCCeE--eEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccE
Q psy12614 81 NDRLFSGGLQGFVNEYDMRRLNI--KSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRI 158 (708)
Q Consensus 81 ~~~l~s~~~d~~i~vwd~~~~~~--~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v 158 (708)
...+++.+.||+|++-|++++.. +..+......+..+.|+.+...++++..=|...+||.+++.-.+ ..+.-|...|
T Consensus 247 ~s~i~ssSyDGtiR~~D~~~~i~e~v~s~~~d~~~fs~~d~~~e~~~vl~~~~~G~f~~iD~R~~~s~~-~~~~lh~kKI 325 (498)
T KOG4328|consen 247 TSQIYSSSYDGTIRLQDFEGNISEEVLSLDTDNIWFSSLDFSAESRSVLFGDNVGNFNVIDLRTDGSEY-ENLRLHKKKI 325 (498)
T ss_pred hhheeeeccCceeeeeeecchhhHHHhhcCccceeeeeccccCCCccEEEeecccceEEEEeecCCccc-hhhhhhhccc
Confidence 77899999999999999998753 33333345667788899888888888888899999999776532 4566688899
Q ss_pred EEEEECCCC-CEEEEecCC-eEEEEEcCCCceEEE--EEecccCCCCCceeEEEEEEccCC-EEEEEcCCCcEEEEeCC-
Q psy12614 159 LCTAWHSSG-DYLVTGCAA-AVRVWDIHKGHAIHK--MSLDKSSKFSKNTAVWCVAFCADF-TIITGDSGGFVRFWDGK- 232 (708)
Q Consensus 159 ~~~~~s~d~-~~l~~~~~d-~i~iwd~~~~~~~~~--~~~~~~~~~~~~~~v~~~~~~~~~-~l~~~~~dg~i~~wd~~- 232 (708)
.+++++|-. .+||+++.| +.+|||++....... +..- .|...|.+..|+|.+ ++++.+.|..|+|||..
T Consensus 326 ~sv~~NP~~p~~laT~s~D~T~kIWD~R~l~~K~sp~lst~-----~HrrsV~sAyFSPs~gtl~TT~~D~~IRv~dss~ 400 (498)
T KOG4328|consen 326 TSVALNPVCPWFLATASLDQTAKIWDLRQLRGKASPFLSTL-----PHRRSVNSAYFSPSGGTLLTTCQDNEIRVFDSSC 400 (498)
T ss_pred ceeecCCCCchheeecccCcceeeeehhhhcCCCCcceecc-----cccceeeeeEEcCCCCceEeeccCCceEEeeccc
Confidence 999999976 567899999 999999986544332 2221 458999999999987 79999999999999983
Q ss_pred ---CCeeEEEeecccc------CeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccc-
Q psy12614 233 ---TGVQWSDVKTHKK------DILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHE- 302 (708)
Q Consensus 233 ---~~~~~~~~~~~~~------~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~- 302 (708)
...+...+. |.. ......|.|+.+++++|-.-..|-++|-.. ++ ....+....
T Consensus 401 ~sa~~~p~~~I~-Hn~~t~RwlT~fKA~W~P~~~li~vg~~~r~IDv~~~~~--------~q--------~v~el~~P~~ 463 (498)
T KOG4328|consen 401 ISAKDEPLGTIP-HNNRTGRWLTPFKAAWDPDYNLIVVGRYPRPIDVFDGNG--------GQ--------MVCELHDPES 463 (498)
T ss_pred ccccCCccceee-ccCcccccccchhheeCCCccEEEEeccCcceeEEcCCC--------CE--------EeeeccCccc
Confidence 233344443 221 234567999999999999999999999887 43 222222111
Q ss_pred cceEEE-EEe--CC-EEEEEcCCCeEEEEeCC
Q psy12614 303 GDVKSL-ALH--GN-RLYSGGLDSYLSLSYYP 330 (708)
Q Consensus 303 ~~v~~l-~~~--~~-~l~s~~~d~~i~iw~~~ 330 (708)
..|.++ .|+ +. +++-++..|.|.+|.-+
T Consensus 464 ~tI~~vn~~HP~~~~~~aG~~s~Gki~vft~k 495 (498)
T KOG4328|consen 464 STIPSVNEFHPMRDTLAAGGNSSGKIYVFTNK 495 (498)
T ss_pred cccccceeecccccceeccCCccceEEEEecC
Confidence 134443 344 55 44445567788877543
|
|
| >KOG1274|consensus | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.2e-21 Score=196.22 Aligned_cols=281 Identities=12% Similarity=0.152 Sum_probs=212.0
Q ss_pred ccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEeCCEEEEEcCC
Q psy12614 242 THKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALHGNRLYSGGLD 321 (708)
Q Consensus 242 ~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~s~~~d 321 (708)
+|....+.++|.|+|+.|++++.||.|++|+... .. +.+ ..+..+...|.+++..+.+|++++.+
T Consensus 11 aht~G~t~i~~d~~gefi~tcgsdg~ir~~~~~s--------d~--e~P-----~ti~~~g~~v~~ia~~s~~f~~~s~~ 75 (933)
T KOG1274|consen 11 AHTGGLTLICYDPDGEFICTCGSDGDIRKWKTNS--------DE--EEP-----ETIDISGELVSSIACYSNHFLTGSEQ 75 (933)
T ss_pred hccCceEEEEEcCCCCEEEEecCCCceEEeecCC--------cc--cCC-----chhhccCceeEEEeecccceEEeecc
Confidence 5888899999999999999999999999999877 31 111 11222677888888888899999999
Q ss_pred CeEEEEeCCCCceeecCc-cCCCCceEEEEcCCcEEEEE-cCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEE
Q psy12614 322 SYLSLSYYPPKTLVKYPC-TLAQSTPVSLAKDIQHVLLQ-YTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMS 399 (708)
Q Consensus 322 ~~i~iw~~~~~~~~~~~~-~~~~~~~~~~s~~~~~l~~~-~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (708)
++|.+|.+.+.....+.. ...+...++++-+|++++.+ .|-.|++.+..... .....
T Consensus 76 ~tv~~y~fps~~~~~iL~Rftlp~r~~~v~g~g~~iaagsdD~~vK~~~~~D~s---------------------~~~~l 134 (933)
T KOG1274|consen 76 NTVLRYKFPSGEEDTILARFTLPIRDLAVSGSGKMIAAGSDDTAVKLLNLDDSS---------------------QEKVL 134 (933)
T ss_pred ceEEEeeCCCCCccceeeeeeccceEEEEecCCcEEEeecCceeEEEEeccccc---------------------hheee
Confidence 999999998877443332 23467889999999999986 66679998887654 34455
Q ss_pred ecCCCceEEEEeCCCCcEEEEEc-CCceEEEEEEecCCcceeEEeecCCcccc---cceeEEEEEecCCCeEEEEecCCc
Q psy12614 400 AVNNATIRCSVVSNDGKYVAYST-ESCVRLHSLDLDGDKPQISRIKNLPAPLF---KSIFTHVLISADSTLLLAVSLNGP 475 (708)
Q Consensus 400 ~~~~~~i~~~~~s~~g~~l~~~~-d~~i~i~~~~~~~~~~~~~~~~~~~~~~~---~~~i~~~~~s~d~~~l~~~~~dg~ 475 (708)
.+|..+|.++.|+|++.+||++. ||.|++|+++.+.....+.. +....+ ...++.++|+|+|..+++...|+.
T Consensus 135 rgh~apVl~l~~~p~~~fLAvss~dG~v~iw~~~~~~~~~tl~~---v~k~n~~~~s~i~~~~aW~Pk~g~la~~~~d~~ 211 (933)
T KOG1274|consen 135 RGHDAPVLQLSYDPKGNFLAVSSCDGKVQIWDLQDGILSKTLTG---VDKDNEFILSRICTRLAWHPKGGTLAVPPVDNT 211 (933)
T ss_pred cccCCceeeeeEcCCCCEEEEEecCceEEEEEcccchhhhhccc---CCccccccccceeeeeeecCCCCeEEeeccCCe
Confidence 68999999999999999999966 99999999997543333333 222221 234556899999888888888888
Q ss_pred EEEecCCCeEEEEEecCCCCCccCcceEEEEECCCCcEEEEEecCCeEEEEECCceeeecCCCCCCceEEEEcCCCCEEE
Q psy12614 476 LYIIDLSSLEIKYCVDPYKSNLMSDVISLVQMSECKQYIVCADRKSHVVIWKNGQHHASLPRYRKPSTAMAIHPTLSTLV 555 (708)
Q Consensus 476 i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~v~~l~~s~d~~~l~ 555 (708)
|-.+....++....+..... ...++++.|||+|+|||+++.+|.|.|||.++... ......|.+++|.|+.+-|-
T Consensus 212 Vkvy~r~~we~~f~Lr~~~~---ss~~~~~~wsPnG~YiAAs~~~g~I~vWnv~t~~~--~~~~~~Vc~~aw~p~~n~it 286 (933)
T KOG1274|consen 212 VKVYSRKGWELQFKLRDKLS---SSKFSDLQWSPNGKYIAASTLDGQILVWNVDTHER--HEFKRAVCCEAWKPNANAIT 286 (933)
T ss_pred EEEEccCCceeheeeccccc---ccceEEEEEcCCCcEEeeeccCCcEEEEecccchh--ccccceeEEEecCCCCCeeE
Confidence 33333344466666654333 44599999999999999999999999999997333 22346899999999988776
Q ss_pred EEecCCcEEEE
Q psy12614 556 TVYSDHRIVEF 566 (708)
Q Consensus 556 ~~~~dg~i~vw 566 (708)
.....|...+|
T Consensus 287 ~~~~~g~~~~~ 297 (933)
T KOG1274|consen 287 LITALGTLGVS 297 (933)
T ss_pred EEeeccccccC
Confidence 66555554444
|
|
| >KOG1538|consensus | Back alignment and domain information |
|---|
Probab=99.90 E-value=6e-21 Score=183.91 Aligned_cols=270 Identities=16% Similarity=0.195 Sum_probs=212.8
Q ss_pred ceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEE
Q psy12614 113 TCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHK 191 (708)
Q Consensus 113 ~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~ 191 (708)
.|..++|-|||..|+.+.. ..+.+||...|.+. .++++|.+.|.+++|+.||+.+|+|+.| .|.+|+..- ...
T Consensus 14 ci~d~afkPDGsqL~lAAg-~rlliyD~ndG~ll--qtLKgHKDtVycVAys~dGkrFASG~aDK~VI~W~~kl---EG~ 87 (1081)
T KOG1538|consen 14 CINDIAFKPDGTQLILAAG-SRLLVYDTSDGTLL--QPLKGHKDTVYCVAYAKDGKRFASGSADKSVIIWTSKL---EGI 87 (1081)
T ss_pred chheeEECCCCceEEEecC-CEEEEEeCCCcccc--cccccccceEEEEEEccCCceeccCCCceeEEEecccc---cce
Confidence 7899999999998887654 56999999999887 8999999999999999999999999999 999998532 223
Q ss_pred EEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEE
Q psy12614 192 MSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVC 270 (708)
Q Consensus 192 ~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i 270 (708)
++. +|...|.|+.|+|-.+ +++++- ...-+|....... ...+ ....+.+.+|..||++++.|-.+|+|.+
T Consensus 88 LkY------SH~D~IQCMsFNP~~h~LasCsL-sdFglWS~~qK~V-~K~k-ss~R~~~CsWtnDGqylalG~~nGTIsi 158 (1081)
T KOG1538|consen 88 LKY------SHNDAIQCMSFNPITHQLASCSL-SDFGLWSPEQKSV-SKHK-SSSRIICCSWTNDGQYLALGMFNGTISI 158 (1081)
T ss_pred eee------ccCCeeeEeecCchHHHhhhcch-hhccccChhhhhH-Hhhh-hheeEEEeeecCCCcEEEEeccCceEEe
Confidence 333 4589999999999886 665554 4577888654332 2222 3467889999999999999999999999
Q ss_pred EEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe-------CCEEEEEcCCCeEEEEeCCCCceeecCccCCC
Q psy12614 271 FQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH-------GNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQ 343 (708)
Q Consensus 271 w~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~-------~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~ 343 (708)
-+-.. .+ -..+....+.+.+|.+++|+ .+.++......++.++.+.+..+.+-....-.
T Consensus 159 RNk~g--------Ee------k~~I~Rpgg~Nspiwsi~~~p~sg~G~~di~aV~DW~qTLSFy~LsG~~Igk~r~L~Fd 224 (1081)
T KOG1538|consen 159 RNKNG--------EE------KVKIERPGGSNSPIWSICWNPSSGEGRNDILAVADWGQTLSFYQLSGKQIGKDRALNFD 224 (1081)
T ss_pred ecCCC--------Cc------ceEEeCCCCCCCCceEEEecCCCCCCccceEEEEeccceeEEEEecceeecccccCCCC
Confidence 86654 11 11233344578899999998 36788899999999999998876655534556
Q ss_pred CceEEEEcCCcEEEE-EcCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEEEc
Q psy12614 344 STPVSLAKDIQHVLL-QYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYST 422 (708)
Q Consensus 344 ~~~~~~s~~~~~l~~-~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~ 422 (708)
+.++.+.++|.+++. +.++.+.+|..+. ..+......+..|+.++..|++++++.|-
T Consensus 225 P~CisYf~NGEy~LiGGsdk~L~~fTR~G----------------------vrLGTvg~~D~WIWtV~~~PNsQ~v~~GC 282 (1081)
T KOG1538|consen 225 PCCISYFTNGEYILLGGSDKQLSLFTRDG----------------------VRLGTVGEQDSWIWTVQAKPNSQYVVVGC 282 (1081)
T ss_pred chhheeccCCcEEEEccCCCceEEEeecC----------------------eEEeeccccceeEEEEEEccCCceEEEEE
Confidence 778999999999988 5888999998664 33444445788999999999999999965
Q ss_pred -CCceEEEEEEe
Q psy12614 423 -ESCVRLHSLDL 433 (708)
Q Consensus 423 -d~~i~i~~~~~ 433 (708)
||+|.-|++..
T Consensus 283 qDGTiACyNl~f 294 (1081)
T KOG1538|consen 283 QDGTIACYNLIF 294 (1081)
T ss_pred ccCeeehhhhHH
Confidence 99998887643
|
|
| >KOG1445|consensus | Back alignment and domain information |
|---|
Probab=99.90 E-value=1e-20 Score=181.27 Aligned_cols=250 Identities=14% Similarity=0.123 Sum_probs=166.0
Q ss_pred cCCCcEEEEeCCCC-eeEE-Eee--ccccCeEEEEEeC-CCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEe
Q psy12614 221 DSGGFVRFWDGKTG-VQWS-DVK--THKKDILALTVSE-DENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRS 295 (708)
Q Consensus 221 ~~dg~i~~wd~~~~-~~~~-~~~--~~~~~i~~~~~s~-~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~ 295 (708)
+..|.|.||+++.. ++-. .+. .....|+.+.|.| |...|++++.||.|++|.+.. +. ..+....+.
T Consensus 600 g~gG~iai~el~~PGrLPDgv~p~l~Ngt~vtDl~WdPFD~~rLAVa~ddg~i~lWr~~a--------~g-l~e~~~tPe 670 (1012)
T KOG1445|consen 600 GSGGVIAIYELNEPGRLPDGVMPGLFNGTLVTDLHWDPFDDERLAVATDDGQINLWRLTA--------NG-LPENEMTPE 670 (1012)
T ss_pred CCCceEEEEEcCCCCCCCcccccccccCceeeecccCCCChHHeeecccCceEEEEEecc--------CC-CCcccCCcc
Confidence 34566777776542 2111 111 1356789999999 668999999999999999976 21 111222356
Q ss_pred EEEeccccceEEEEEe---CCEEEEEcCCCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEEEcCCeEEEEEecCC
Q psy12614 296 VNRVIHEGDVKSLALH---GNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSLGSA 372 (708)
Q Consensus 296 ~~~~~~~~~v~~l~~~---~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~ 372 (708)
..+..|...|.++.|+ .+.|++++.|-+|++||+.+..
T Consensus 671 ~~lt~h~eKI~slRfHPLAadvLa~asyd~Ti~lWDl~~~~--------------------------------------- 711 (1012)
T KOG1445|consen 671 KILTIHGEKITSLRFHPLAADVLAVASYDSTIELWDLANAK--------------------------------------- 711 (1012)
T ss_pred eeeecccceEEEEEecchhhhHhhhhhccceeeeeehhhhh---------------------------------------
Confidence 7788999999999999 8999999999999999886543
Q ss_pred CCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEE-EcCCceEEEEEEecCCcceeEEeecCCcccc
Q psy12614 373 QSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAY-STESCVRLHSLDLDGDKPQISRIKNLPAPLF 451 (708)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~-~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~ 451 (708)
......+|.+.|..+||||||+.+|+ +.||++++|+-...+.. +.. =++..+
T Consensus 712 ----------------------~~~~l~gHtdqIf~~AWSpdGr~~AtVcKDg~~rVy~Prs~e~p--v~E---g~gpvg 764 (1012)
T KOG1445|consen 712 ----------------------LYSRLVGHTDQIFGIAWSPDGRRIATVCKDGTLRVYEPRSREQP--VYE---GKGPVG 764 (1012)
T ss_pred ----------------------hhheeccCcCceeEEEECCCCcceeeeecCceEEEeCCCCCCCc--ccc---CCCCcc
Confidence 22223478899999999999999998 77999999998764332 221 122221
Q ss_pred --cceeEEEEEecCCCeEEEEecCCc------EEEecCCCeEEEEEecCCCCCccCcceEEEEECCCCc-EEEEEecCCe
Q psy12614 452 --KSIFTHVLISADSTLLLAVSLNGP------LYIIDLSSLEIKYCVDPYKSNLMSDVISLVQMSECKQ-YIVCADRKSH 522 (708)
Q Consensus 452 --~~~i~~~~~s~d~~~l~~~~~dg~------i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~~d~~ 522 (708)
... +.|.-||+++++.+.|.. +|+..+-+...+.+..... ...+.--.+.+|.. .+++|-.|..
T Consensus 765 tRgAR---i~wacdgr~viv~Gfdk~SeRQv~~Y~Aq~l~~~pl~t~~lDv----aps~LvP~YD~Ds~~lfltGKGD~~ 837 (1012)
T KOG1445|consen 765 TRGAR---ILWACDGRIVIVVGFDKSSERQVQMYDAQTLDLRPLYTQVLDV----APSPLVPHYDYDSNVLFLTGKGDRF 837 (1012)
T ss_pred Cccee---EEEEecCcEEEEecccccchhhhhhhhhhhccCCcceeeeecc----cCccccccccCCCceEEEecCCCce
Confidence 334 789999999999888765 6665544333332221111 11222233455554 5567778999
Q ss_pred EEEEECC---ceeeecCCCCCCc--eEEEEcCCCC
Q psy12614 523 VVIWKNG---QHHASLPRYRKPS--TAMAIHPTLS 552 (708)
Q Consensus 523 i~iw~~~---~~~~~~~~~~~~v--~~l~~s~d~~ 552 (708)
|.+|.+- -..+.+..|.+++ ..++|.+..+
T Consensus 838 v~~yEv~~esPy~lpl~~f~sp~~hqGl~fl~K~~ 872 (1012)
T KOG1445|consen 838 VNMYEVIYESPYLLPLAPFMSPVGHQGLAFLQKLK 872 (1012)
T ss_pred EEEEEecCCCceeeecccccCCCcccceeeecccc
Confidence 9999987 2334555555443 3467766443
|
|
| >KOG0267|consensus | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.3e-23 Score=204.32 Aligned_cols=250 Identities=22% Similarity=0.369 Sum_probs=213.0
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECCCCeEeEEEeecCCce
Q psy12614 37 KSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTC 114 (708)
Q Consensus 37 ~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v 114 (708)
-+.+++.....-.+++||... +..|. ..|.++..- ++.+++|+.|-.+-+|.+..-..+..+.+|..+|
T Consensus 3 ~~~~~m~~~~~t~Lr~~~~~~-------~~~hs--aav~~lk~~~s~r~~~~Gg~~~k~~L~~i~kp~~i~S~~~hespI 73 (825)
T KOG0267|consen 3 GMEFLMKTKRATKLRVWDTRE-------FVAHS--AAVGCLKIRKSSRSLVTGGEDEKVNLWAIGKPNAITSLTGHESPI 73 (825)
T ss_pred cccccceeeeeeccccccchh-------hhhhh--hhhceeeeeccceeeccCCCceeeccccccCCchhheeeccCCcc
Confidence 344455555566788888763 34455 667776655 7889999999999999998888888899999999
Q ss_pred EEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEE
Q psy12614 115 WCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMS 193 (708)
Q Consensus 115 ~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~ 193 (708)
.++.|+++..+|++|+.+|+|++||++.++.+ +.+.+|...+.++.|+|-+.+.++++.| .+.+||.+..-+...+.
T Consensus 74 eSl~f~~~E~LlaagsasgtiK~wDleeAk~v--rtLtgh~~~~~sv~f~P~~~~~a~gStdtd~~iwD~Rk~Gc~~~~~ 151 (825)
T KOG0267|consen 74 ESLTFDTSERLLAAGSASGTIKVWDLEEAKIV--RTLTGHLLNITSVDFHPYGEFFASGSTDTDLKIWDIRKKGCSHTYK 151 (825)
T ss_pred eeeecCcchhhhcccccCCceeeeehhhhhhh--hhhhccccCcceeeeccceEEeccccccccceehhhhccCceeeec
Confidence 99999999999999999999999999999887 7999999999999999999999999999 99999999777777776
Q ss_pred ecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEE
Q psy12614 194 LDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQ 272 (708)
Q Consensus 194 ~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~ 272 (708)
. |...+..+.|+|+|+ ++.++.|..+++||+..|+.+..++.|...+..+.|.|..-++++|+.|+++++||
T Consensus 152 s-------~~~vv~~l~lsP~Gr~v~~g~ed~tvki~d~~agk~~~ef~~~e~~v~sle~hp~e~Lla~Gs~d~tv~f~d 224 (825)
T KOG0267|consen 152 S-------HTRVVDVLRLSPDGRWVASGGEDNTVKIWDLTAGKLSKEFKSHEGKVQSLEFHPLEVLLAPGSSDRTVRFWD 224 (825)
T ss_pred C-------CcceeEEEeecCCCceeeccCCcceeeeecccccccccccccccccccccccCchhhhhccCCCCceeeeec
Confidence 3 388899999999997 77888899999999999999999999999999999999999999999999999999
Q ss_pred ccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEEEcC
Q psy12614 273 RTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSGGL 320 (708)
Q Consensus 273 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~~~ 320 (708)
+++ -+ .+.........|.++.|+ +..+++|..
T Consensus 225 let--------fe--------~I~s~~~~~~~v~~~~fn~~~~~~~~G~q 258 (825)
T KOG0267|consen 225 LET--------FE--------VISSGKPETDGVRSLAFNPDGKIVLSGEQ 258 (825)
T ss_pred cce--------eE--------EeeccCCccCCceeeeecCCceeeecCch
Confidence 997 21 333444456789999998 555555543
|
|
| >KOG1034|consensus | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.6e-21 Score=172.22 Aligned_cols=327 Identities=15% Similarity=0.128 Sum_probs=229.5
Q ss_pred EEEecCCCCCcEEEEEEe-------CCEEEEEcCCCcEEEEECCCCe---EeEEEe--ecCCceEEEEEecC----CCEE
Q psy12614 63 RVFIGDPLSNSIECLTWF-------NDRLFSGGLQGFVNEYDMRRLN---IKSSTA--VTSGTCWCLSVHKK----KRLL 126 (708)
Q Consensus 63 ~~~~~h~~~~~v~~l~~~-------~~~l~s~~~d~~i~vwd~~~~~---~~~~~~--~~~~~v~~~~~s~~----~~~l 126 (708)
+..++|. .+|..++|+ .+.++++ ..+.+.+|...... .++.+. .|......++|+-| ..+|
T Consensus 32 ~l~ed~~--~~I~gv~fN~~~~~~e~~vfatv-G~~rvtiy~c~~d~~ir~lq~y~D~d~~Esfytcsw~yd~~~~~p~l 108 (385)
T KOG1034|consen 32 HLKEDHN--KPIFGVAFNSFLGCDEPQVFATV-GGNRVTIYECPGDGGIRLLQSYADEDHDESFYTCSWSYDSNTGNPFL 108 (385)
T ss_pred ehhccCC--CccceeeeehhcCCCCCceEEEe-CCcEEEEEEECCccceeeeeeccCCCCCcceEEEEEEecCCCCCeeE
Confidence 4566787 899999998 2334444 44567788765432 333332 36667777888764 4489
Q ss_pred EEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCC-CEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCce
Q psy12614 127 AAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSG-DYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNT 204 (708)
Q Consensus 127 a~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~-~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 204 (708)
|+|+.-|.|+|.|+..+++. ..+.+|.+.|..+.|.|+. +++++++.| .|++|++++..++..+-... +|..
T Consensus 109 a~~G~~GvIrVid~~~~~~~--~~~~ghG~sINeik~~p~~~qlvls~SkD~svRlwnI~~~~Cv~VfGG~e----gHrd 182 (385)
T KOG1034|consen 109 AAGGYLGVIRVIDVVSGQCS--KNYRGHGGSINEIKFHPDRPQLVLSASKDHSVRLWNIQTDVCVAVFGGVE----GHRD 182 (385)
T ss_pred EeecceeEEEEEecchhhhc--cceeccCccchhhhcCCCCCcEEEEecCCceEEEEeccCCeEEEEecccc----cccC
Confidence 99999999999999999987 8899999999999999986 688899999 99999999999998876554 6699
Q ss_pred eEEEEEEccCC-EEEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCC
Q psy12614 205 AVWCVAFCADF-TIITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTS 283 (708)
Q Consensus 205 ~v~~~~~~~~~-~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~ 283 (708)
.|.++.|+++| ++++++.|.+|++|++...+....++ .+..|+|++...-.-. ....+.+..
T Consensus 183 eVLSvD~~~~gd~i~ScGmDhslk~W~l~~~~f~~~lE------~s~~~~~~~t~~pfpt--~~~~fp~fs--------- 245 (385)
T KOG1034|consen 183 EVLSVDFSLDGDRIASCGMDHSLKLWRLNVKEFKNKLE------LSITYSPNKTTRPFPT--PKTHFPDFS--------- 245 (385)
T ss_pred cEEEEEEcCCCCeeeccCCcceEEEEecChhHHhhhhh------hhcccCCCCccCcCCc--ccccccccc---------
Confidence 99999999999 59999999999999998654433333 2356777664321000 112222221
Q ss_pred CCCCCCcceEEeEEEeccccceEEEEEeCCEEEEEcCCCeEEEEeCCCCc--eeecCccCCCCceEEEEcCCcEEEEEcC
Q psy12614 284 GPEQGSSVWVRSVNRVIHEGDVKSLALHGNRLYSGGLDSYLSLSYYPPKT--LVKYPCTLAQSTPVSLAKDIQHVLLQYT 361 (708)
Q Consensus 284 g~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~s~~~d~~i~iw~~~~~~--~~~~~~~~~~~~~~~~s~~~~~l~~~~~ 361 (708)
+...|...|.++.|-|+++++-+-++.|..|....-. +.+..
T Consensus 246 -------------t~diHrnyVDCvrw~gd~ilSkscenaI~~w~pgkl~e~~~~vk----------------------- 289 (385)
T KOG1034|consen 246 -------------TTDIHRNYVDCVRWFGDFILSKSCENAIVCWKPGKLEESIHNVK----------------------- 289 (385)
T ss_pred -------------ccccccchHHHHHHHhhheeecccCceEEEEecchhhhhhhccC-----------------------
Confidence 3456889999999999999999999999999763110 11110
Q ss_pred CeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceE--EEEeCCCCcEEEEEc-CCceEEEEEEecCCcc
Q psy12614 362 SHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIR--CSVVSNDGKYVAYST-ESCVRLHSLDLDGDKP 438 (708)
Q Consensus 362 ~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~--~~~~s~~g~~l~~~~-d~~i~i~~~~~~~~~~ 438 (708)
.++ ....++....-....|+ ..+|.|-+++||.|. .|.+.+||++..+..
T Consensus 290 ---------p~e-----------------s~~Ti~~~~~~~~c~iWfirf~~d~~~~~la~gnq~g~v~vwdL~~~ep~- 342 (385)
T KOG1034|consen 290 ---------PPE-----------------SATTILGEFDYPMCDIWFIRFAFDPWQKMLALGNQSGKVYVWDLDNNEPP- 342 (385)
T ss_pred ---------CCc-----------------cceeeeeEeccCccceEEEEEeecHHHHHHhhccCCCcEEEEECCCCCCc-
Confidence 000 00011111112223343 346778899999976 999999999974432
Q ss_pred eeEEeecCCcccccceeEEEEEecCCCeEEEEecCCcEEEecC
Q psy12614 439 QISRIKNLPAPLFKSIFTHVLISADSTLLLAVSLNGPLYIIDL 481 (708)
Q Consensus 439 ~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~~~~~dg~i~~~~~ 481 (708)
...+ +..+.....|...+||.||..|+..++|+.||.++.
T Consensus 343 ~~tt---l~~s~~~~tVRQ~sfS~dgs~lv~vcdd~~Vwrwdr 382 (385)
T KOG1034|consen 343 KCTT---LTHSKSGSTVRQTSFSRDGSILVLVCDDGTVWRWDR 382 (385)
T ss_pred cCce---EEeccccceeeeeeecccCcEEEEEeCCCcEEEEEe
Confidence 2222 222222556788999999999999999999998763
|
|
| >KOG0321|consensus | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.3e-21 Score=186.17 Aligned_cols=287 Identities=13% Similarity=0.137 Sum_probs=208.7
Q ss_pred EEEEEcC---CCCEEEEEeCCCcEEEEeCCCCCeE-----EEEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECC
Q psy12614 30 NCIACEP---KSSRLAVSRADQSIEIWDISETPHV-----DRVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMR 99 (708)
Q Consensus 30 ~~~~~s~---~~~~la~~~~dg~v~iwd~~~~~~~-----~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~ 99 (708)
.+..|++ ....||++.+||.|.++|....... .+....|. ..|..+.|. ...|++++.|.++++||++
T Consensus 53 f~~sFs~~~n~eHiLavadE~G~i~l~dt~~~~fr~ee~~lk~~~aH~--nAifDl~wapge~~lVsasGDsT~r~Wdvk 130 (720)
T KOG0321|consen 53 FADSFSAAPNKEHILAVADEDGGIILFDTKSIVFRLEERQLKKPLAHK--NAIFDLKWAPGESLLVSASGDSTIRPWDVK 130 (720)
T ss_pred ccccccCCCCccceEEEecCCCceeeecchhhhcchhhhhhccccccc--ceeEeeccCCCceeEEEccCCceeeeeeec
Confidence 3466665 3467999999999999998764332 23677899 999999999 6788999999999999999
Q ss_pred CCeEeEE--EeecCCceEEEEEecCCC-EEEEEeCCCcEEEEEccCCcEE------------------E-------EEec
Q psy12614 100 RLNIKSS--TAVTSGTCWCLSVHKKKR-LLAAGTEQGHINLFQISDEGLL------------------Y-------EKLL 151 (708)
Q Consensus 100 ~~~~~~~--~~~~~~~v~~~~~s~~~~-~la~~~~d~~i~iwd~~~~~~~------------------~-------~~~~ 151 (708)
++++... +.+|.+.|.+++|.|... .+++|+.||.|.|||+.....- . ....
T Consensus 131 ~s~l~G~~~~~GH~~SvkS~cf~~~n~~vF~tGgRDg~illWD~R~n~~d~~e~~~~~~~~~~n~~ptpskp~~kr~~k~ 210 (720)
T KOG0321|consen 131 TSRLVGGRLNLGHTGSVKSECFMPTNPAVFCTGGRDGEILLWDCRCNGVDALEEFDNRIYGRHNTAPTPSKPLKKRIRKW 210 (720)
T ss_pred cceeecceeecccccccchhhhccCCCcceeeccCCCcEEEEEEeccchhhHHHHhhhhhccccCCCCCCchhhcccccc
Confidence 9998877 889999999999999665 6788999999999998642200 0 0011
Q ss_pred ccccccEEE---EEECCCCCEEEEecC-C-eEEEEEcCCCceEEEEEecccCC----CCCceeEEEEEEccCC-EEEEEc
Q psy12614 152 DRQQGRILC---TAWHSSGDYLVTGCA-A-AVRVWDIHKGHAIHKMSLDKSSK----FSKNTAVWCVAFCADF-TIITGD 221 (708)
Q Consensus 152 ~~~~~~v~~---~~~s~d~~~l~~~~~-d-~i~iwd~~~~~~~~~~~~~~~~~----~~~~~~v~~~~~~~~~-~l~~~~ 221 (708)
..+...|.+ +.+..|...||+++. | .|+|||+++.............. ......+.++.....| ++++.+
T Consensus 211 kA~s~ti~ssvTvv~fkDe~tlaSaga~D~~iKVWDLRk~~~~~r~ep~~~~~~~t~skrs~G~~nL~lDssGt~L~AsC 290 (720)
T KOG0321|consen 211 KAASNTIFSSVTVVLFKDESTLASAGAADSTIKVWDLRKNYTAYRQEPRGSDKYPTHSKRSVGQVNLILDSSGTYLFASC 290 (720)
T ss_pred ccccCceeeeeEEEEEeccceeeeccCCCcceEEEeecccccccccCCCcccCccCcccceeeeEEEEecCCCCeEEEEe
Confidence 123344554 556678889999887 7 99999998765443322111000 0114456666666666 466666
Q ss_pred CCCcEEEEeCCCCe--eEEEeeccccC--eEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEE
Q psy12614 222 SGGFVRFWDGKTGV--QWSDVKTHKKD--ILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVN 297 (708)
Q Consensus 222 ~dg~i~~wd~~~~~--~~~~~~~~~~~--i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~ 297 (708)
.|+.|++||+.+-. ++..+.++... -..-..+||+.++++|+.|...++|.+.. - +.....
T Consensus 291 tD~sIy~ynm~s~s~sP~~~~sg~~~~sf~vks~lSpd~~~l~SgSsd~~ayiw~vs~--------~-------e~~~~~ 355 (720)
T KOG0321|consen 291 TDNSIYFYNMRSLSISPVAEFSGKLNSSFYVKSELSPDDCSLLSGSSDEQAYIWVVSS--------P-------EAPPAL 355 (720)
T ss_pred cCCcEEEEeccccCcCchhhccCcccceeeeeeecCCCCceEeccCCCcceeeeeecC--------c-------cCChhh
Confidence 69999999987542 23333333211 12234689999999999999999999987 2 234567
Q ss_pred EeccccceEEEEEe---CCEEEEEcCCCeEEEEeCCCCc
Q psy12614 298 RVIHEGDVKSLALH---GNRLYSGGLDSYLSLSYYPPKT 333 (708)
Q Consensus 298 ~~~~~~~v~~l~~~---~~~l~s~~~d~~i~iw~~~~~~ 333 (708)
+.+|.-.|++++|. -.-+++++.|..+++|++..+.
T Consensus 356 l~Ght~eVt~V~w~pS~~t~v~TcSdD~~~kiW~l~~~l 394 (720)
T KOG0321|consen 356 LLGHTREVTTVRWLPSATTPVATCSDDFRVKIWRLSNGL 394 (720)
T ss_pred hhCcceEEEEEeeccccCCCceeeccCcceEEEeccCch
Confidence 78999999999998 4567888999999999995543
|
|
| >COG2319 FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.1e-18 Score=180.76 Aligned_cols=362 Identities=22% Similarity=0.355 Sum_probs=277.1
Q ss_pred eccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCC-eEEEEEecCCCCCcEEEEEE-e--CC-EEEEEcC-CCcEE
Q psy12614 21 FYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETP-HVDRVFIGDPLSNSIECLTW-F--ND-RLFSGGL-QGFVN 94 (708)
Q Consensus 21 ~~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~-~~~~~~~~h~~~~~v~~l~~-~--~~-~l~s~~~-d~~i~ 94 (708)
.+..|...|.++.+.+.+..++.++.|+.+.+|+...+. ... .+.++. ...+..+.+ . +. .++..+. |+.+.
T Consensus 60 ~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 137 (466)
T COG2319 60 LLRGHEDSITSIAFSPDGELLLSGSSDGTIKLWDLDNGEKLIK-SLEGLH-DSSVSKLALSSPDGNSILLASSSLDGTVK 137 (466)
T ss_pred eeeeccceEEEEEECCCCcEEEEecCCCcEEEEEcCCCceeEE-EEeccC-CCceeeEEEECCCcceEEeccCCCCccEE
Confidence 567899999999999999999999999999999999887 443 666644 137777777 5 54 4555444 99999
Q ss_pred EEECCC-CeEeEEEeecCCceEEEEEecCCCEEEEEeC-CCcEEEEEccCCcEEEEEecccccccEEEEEECCCCC-EEE
Q psy12614 95 EYDMRR-LNIKSSTAVTSGTCWCLSVHKKKRLLAAGTE-QGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGD-YLV 171 (708)
Q Consensus 95 vwd~~~-~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~-~l~ 171 (708)
+||... ......+..|...|..++|+|++..+++++. |+.+++|+...+... ..+.+|...|.+++|+|++. .++
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~~~ 215 (466)
T COG2319 138 LWDLSTPGKLIRTLEGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRTGKPL--STLAGHTDPVSSLAFSPDGGLLIA 215 (466)
T ss_pred EEEecCCCeEEEEEecCcccEEEEEECCCCCEEEecCCCCCceEEEEcCCCceE--EeeccCCCceEEEEEcCCcceEEE
Confidence 999998 8889999999999999999999998888885 999999999986665 67777999999999999998 555
Q ss_pred EecCC-eEEEEEcCCCceEEE-EEecccCCCCCceeEEEEEEccCC-EEEEEcCCCcEEEEeCCCCee-EEEeeccccCe
Q psy12614 172 TGCAA-AVRVWDIHKGHAIHK-MSLDKSSKFSKNTAVWCVAFCADF-TIITGDSGGFVRFWDGKTGVQ-WSDVKTHKKDI 247 (708)
Q Consensus 172 ~~~~d-~i~iwd~~~~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~-~l~~~~~dg~i~~wd~~~~~~-~~~~~~~~~~i 247 (708)
+++.| .|++||...+..+.. +.. +.... ...|+|++ .+++++.++.+++|+...... +..+..|...+
T Consensus 216 ~~~~d~~i~~wd~~~~~~~~~~~~~-------~~~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v 287 (466)
T COG2319 216 SGSSDGTIRLWDLSTGKLLRSTLSG-------HSDSV-VSSFSPDGSLLASGSSDGTIRLWDLRSSSSLLRTLSGHSSSV 287 (466)
T ss_pred EecCCCcEEEEECCCCcEEeeecCC-------CCcce-eEeECCCCCEEEEecCCCcEEEeeecCCCcEEEEEecCCccE
Confidence 55788 999999887777763 332 23333 22899998 577899999999999987664 44446788999
Q ss_pred EEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEE--eccccceEEEEEe-C-CEEEEE-cCCC
Q psy12614 248 LALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNR--VIHEGDVKSLALH-G-NRLYSG-GLDS 322 (708)
Q Consensus 248 ~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~--~~~~~~v~~l~~~-~-~~l~s~-~~d~ 322 (708)
.++.|.|++..+++++.|+.+.+|+... .. ..... ..|...+..+.+. . ..++.+ ..|+
T Consensus 288 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~--------~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 351 (466)
T COG2319 288 LSVAFSPDGKLLASGSSDGTVRLWDLET--------GK--------LLSSLTLKGHEGPVSSLSFSPDGSLLVSGGSDDG 351 (466)
T ss_pred EEEEECCCCCEEEEeeCCCcEEEEEcCC--------Cc--------eEEEeeecccCCceEEEEECCCCCEEEEeecCCC
Confidence 9999999888998899998999998877 43 22222 3677778888884 2 456665 6888
Q ss_pred eEEEEeCCCCceeecCccCCC-CceEEEEcCCcEEEE--EcCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEE
Q psy12614 323 YLSLSYYPPKTLVKYPCTLAQ-STPVSLAKDIQHVLL--QYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMS 399 (708)
Q Consensus 323 ~i~iw~~~~~~~~~~~~~~~~-~~~~~~s~~~~~l~~--~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (708)
.+.+|+.......... .... ...+.+++ ...+.. ..++.+.+|+..... ......
T Consensus 352 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~ 409 (466)
T COG2319 352 TIRLWDLRTGKPLKTL-EGHSNVLSVSFSP-DGRVVSSGSTDGTVRLWDLSTGS--------------------LLRNLD 409 (466)
T ss_pred cEEeeecCCCceeEEe-cCCceEEEEEECC-CCCEEEEecCCCceEEEecccCe--------------------eeeecc
Confidence 9999999887611111 1222 45677777 433333 477899999998755 121121
Q ss_pred ecCCCceEEEEeCCCCcEEEE-EcCCceEEEEEEe
Q psy12614 400 AVNNATIRCSVVSNDGKYVAY-STESCVRLHSLDL 433 (708)
Q Consensus 400 ~~~~~~i~~~~~s~~g~~l~~-~~d~~i~i~~~~~ 433 (708)
.....+....+++++..++. +.++.+++|+...
T Consensus 410 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 443 (466)
T COG2319 410 -GHTSRVTSLDFSPDGKSLASGSSDNTIRLWDLKT 443 (466)
T ss_pred -CCCCcEEEEEECCCCcEEEEecCCCcEEEEeccC
Confidence 11167888999999999988 5599999999875
|
|
| >KOG0650|consensus | Back alignment and domain information |
|---|
Probab=99.88 E-value=4.9e-21 Score=182.41 Aligned_cols=319 Identities=13% Similarity=0.099 Sum_probs=223.4
Q ss_pred EEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe---CC
Q psy12614 237 WSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH---GN 313 (708)
Q Consensus 237 ~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~---~~ 313 (708)
...+.+|.+.|.++...|.|.+|++|+.||++++|.+.+ |. ++.... ..+.|.+++|+ ..
T Consensus 393 ~lvyrGHtg~Vr~iSvdp~G~wlasGsdDGtvriWEi~T--------gR--------cvr~~~-~d~~I~~vaw~P~~~~ 455 (733)
T KOG0650|consen 393 ALVYRGHTGLVRSISVDPSGEWLASGSDDGTVRIWEIAT--------GR--------CVRTVQ-FDSEIRSVAWNPLSDL 455 (733)
T ss_pred eeeEeccCCeEEEEEecCCcceeeecCCCCcEEEEEeec--------ce--------EEEEEe-ecceeEEEEecCCCCc
Confidence 345689999999999999999999999999999999999 74 333332 34689999999 33
Q ss_pred EEEEEcCCCeEEEEeCCCCc-eeecCccCCCCceEEEEcCCcEEEE-----EcCCeEEEEEecCCCCCCCCCCCCCCccc
Q psy12614 314 RLYSGGLDSYLSLSYYPPKT-LVKYPCTLAQSTPVSLAKDIQHVLL-----QYTSHLELWSLGSAQSTDLSSHSNTTGVP 387 (708)
Q Consensus 314 ~l~s~~~d~~i~iw~~~~~~-~~~~~~~~~~~~~~~~s~~~~~l~~-----~~~~~i~i~~~~~~~~~~~~~~~~~~~~~ 387 (708)
.++..+.+..+.+-+..-+. +... +...+++. ..+..+..|.-....
T Consensus 456 ~vLAvA~~~~~~ivnp~~G~~~e~~-------------~t~ell~~~~~~~~p~~~~~~W~~~~~~-------------- 508 (733)
T KOG0650|consen 456 CVLAVAVGECVLIVNPIFGDRLEVG-------------PTKELLASAPNESEPDAAVVTWSRASLD-------------- 508 (733)
T ss_pred eeEEEEecCceEEeCccccchhhhc-------------chhhhhhcCCCccCCcccceeechhhhh--------------
Confidence 33333333445554432221 0000 00001111 112244556544322
Q ss_pred CCCCceEEEEEEecCCCceEEEEeCCCCcEEEEE----cCCceEEEEEEecCCcceeEEeecCCcccccceeEEEEEecC
Q psy12614 388 LLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYS----TESCVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVLISAD 463 (708)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~----~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~d 463 (708)
....-+.+...+...|..+.|+..|.||++. ....|.|+++.....+..++ .. ...+.++.|+|.
T Consensus 509 ---e~~~~v~~~I~~~k~i~~vtWHrkGDYlatV~~~~~~~~VliHQLSK~~sQ~PF~------ks--kG~vq~v~FHPs 577 (733)
T KOG0650|consen 509 ---ELEKGVCIVIKHPKSIRQVTWHRKGDYLATVMPDSGNKSVLIHQLSKRKSQSPFR------KS--KGLVQRVKFHPS 577 (733)
T ss_pred ---hhccceEEEEecCCccceeeeecCCceEEEeccCCCcceEEEEecccccccCchh------hc--CCceeEEEecCC
Confidence 0111234555788999999999999999982 25678899988633332222 11 225666999999
Q ss_pred CCeEEEEecCCc-EEEecCCCeEEEEEecCCCCCccCcceEEEEECCCCcEEEEEecCCeEEEEECC---ceeeecCCCC
Q psy12614 464 STLLLAVSLNGP-LYIIDLSSLEIKYCVDPYKSNLMSDVISLVQMSECKQYIVCADRKSHVVIWKNG---QHHASLPRYR 539 (708)
Q Consensus 464 ~~~l~~~~~dg~-i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~---~~~~~~~~~~ 539 (708)
..+|++++.... ||++... ++++.+.+. ...|..++.+|.|..|+.++.|+.+..+|++ +..+++.-|.
T Consensus 578 ~p~lfVaTq~~vRiYdL~kq--elvKkL~tg-----~kwiS~msihp~GDnli~gs~d~k~~WfDldlsskPyk~lr~H~ 650 (733)
T KOG0650|consen 578 KPYLFVATQRSVRIYDLSKQ--ELVKKLLTG-----SKWISSMSIHPNGDNLILGSYDKKMCWFDLDLSSKPYKTLRLHE 650 (733)
T ss_pred CceEEEEeccceEEEehhHH--HHHHHHhcC-----CeeeeeeeecCCCCeEEEecCCCeeEEEEcccCcchhHHhhhhh
Confidence 999999998888 9998765 444444432 5589999999999999999999999999999 5667999999
Q ss_pred CCceEEEEcCCCCEEEEEecCCcEEEEEcCCCCCCchhhhhhccCchhhhcCCCC----eeEEEeCCCCCceEEEEcCee
Q psy12614 540 KPSTAMAIHPTLSTLVTVYSDHRIVEFDLNRKAFTTFSRKLETNHPNEWLSRQLP----VLGIEFDPQDSSLIYLMDDSA 615 (708)
Q Consensus 540 ~~v~~l~~s~d~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~----i~~l~~s~~~~~l~~~~~d~~ 615 (708)
..+++++|++.-.++++|+.||++.||.-.-..-. .........+.+.+|... |.+..|.|.-.+|++++.||+
T Consensus 651 ~avr~Va~H~ryPLfas~sdDgtv~Vfhg~VY~Dl--~qnpliVPlK~L~gH~~~~~~gVLd~~wHP~qpWLfsAGAd~t 728 (733)
T KOG0650|consen 651 KAVRSVAFHKRYPLFASGSDDGTVIVFHGMVYNDL--LQNPLIVPLKRLRGHEKTNDLGVLDTIWHPRQPWLFSAGADGT 728 (733)
T ss_pred hhhhhhhhccccceeeeecCCCcEEEEeeeeehhh--hcCCceEeeeeccCceeecccceEeecccCCCceEEecCCCce
Confidence 99999999999999999999999999863211100 000000123456677654 999999999999999999999
Q ss_pred EEEE
Q psy12614 616 LCVI 619 (708)
Q Consensus 616 i~~w 619 (708)
|++|
T Consensus 729 irlf 732 (733)
T KOG0650|consen 729 IRLF 732 (733)
T ss_pred EEee
Confidence 9998
|
|
| >KOG2919|consensus | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.8e-20 Score=165.18 Aligned_cols=190 Identities=14% Similarity=0.122 Sum_probs=143.5
Q ss_pred eEEEEeCCCCcEEEEEcCCceEEEEEEecCCcceeEEeecCCcccc-cceeEEEEEecCC-CeEEEEecCCc--EEEecC
Q psy12614 406 IRCSVVSNDGKYVAYSTESCVRLHSLDLDGDKPQISRIKNLPAPLF-KSIFTHVLISADS-TLLLAVSLNGP--LYIIDL 481 (708)
Q Consensus 406 i~~~~~s~~g~~l~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~s~d~-~~l~~~~~dg~--i~~~~~ 481 (708)
..+++|+|||..|.+|...+|++||+...+........ ...+..+ ...|.+++|+|.. +.+++++.... ||.-+.
T Consensus 161 AhsL~Fs~DGeqlfaGykrcirvFdt~RpGr~c~vy~t-~~~~k~gq~giisc~a~sP~~~~~~a~gsY~q~~giy~~~~ 239 (406)
T KOG2919|consen 161 AHSLQFSPDGEQLFAGYKRCIRVFDTSRPGRDCPVYTT-VTKGKFGQKGIISCFAFSPMDSKTLAVGSYGQRVGIYNDDG 239 (406)
T ss_pred heeEEecCCCCeEeecccceEEEeeccCCCCCCcchhh-hhcccccccceeeeeeccCCCCcceeeecccceeeeEecCC
Confidence 35789999999999999999999999543322222111 0222222 4567889999965 48888888777 888877
Q ss_pred CCeEEEEEecCCCCCccCcceEEEEECCCCcEEEEEe-cCCeEEEEECCc---eeeecCCCCC-CceEE--EEcCCCCEE
Q psy12614 482 SSLEIKYCVDPYKSNLMSDVISLVQMSECKQYIVCAD-RKSHVVIWKNGQ---HHASLPRYRK-PSTAM--AIHPTLSTL 554 (708)
Q Consensus 482 ~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-~d~~i~iw~~~~---~~~~~~~~~~-~v~~l--~~s~d~~~l 554 (708)
. ..+..+- || .+.|+.++|.+||+.|++|. .|-.|..||+.. ....+.+|.. .=..+ ...|++++|
T Consensus 240 ~--~pl~llg---gh--~gGvThL~~~edGn~lfsGaRk~dkIl~WDiR~~~~pv~~L~rhv~~TNQRI~FDld~~~~~L 312 (406)
T KOG2919|consen 240 R--RPLQLLG---GH--GGGVTHLQWCEDGNKLFSGARKDDKILCWDIRYSRDPVYALERHVGDTNQRILFDLDPKGEIL 312 (406)
T ss_pred C--Cceeeec---cc--CCCeeeEEeccCcCeecccccCCCeEEEEeehhccchhhhhhhhccCccceEEEecCCCCcee
Confidence 6 3444443 66 88999999999999999998 477999999993 3347777765 33344 446889999
Q ss_pred EEEecCCcEEEEEcCC-CCCCchhhhhhccCchhhhcCCCCeeEEEeCCCCCceEEEEcCe
Q psy12614 555 VTVYSDHRIVEFDLNR-KAFTTFSRKLETNHPNEWLSRQLPVLGIEFDPQDSSLIYLMDDS 614 (708)
Q Consensus 555 ~~~~~dg~i~vwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~~~~l~~~~~d~ 614 (708)
++|+.||.|++||+.+ +... ..+..++..++.+++.|--+.+++++...
T Consensus 313 asG~tdG~V~vwdlk~~gn~~-----------sv~~~~sd~vNgvslnP~mpilatssGqr 362 (406)
T KOG2919|consen 313 ASGDTDGSVRVWDLKDLGNEV-----------SVTGNYSDTVNGVSLNPIMPILATSSGQR 362 (406)
T ss_pred eccCCCccEEEEecCCCCCcc-----------cccccccccccceecCcccceeeeccCce
Confidence 9999999999999998 5433 45667899999999999988888887653
|
|
| >KOG2919|consensus | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.7e-20 Score=164.10 Aligned_cols=292 Identities=16% Similarity=0.178 Sum_probs=206.4
Q ss_pred EEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEeCCEEEEEcCCCcEEEEECCCCeEeEEEe
Q psy12614 29 INCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWFNDRLFSGGLQGFVNEYDMRRLNIKSSTA 108 (708)
Q Consensus 29 v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~ 108 (708)
...+.|||||..|.+-++|..+.+|++...-.-... .+...-.....+.+-
T Consensus 52 ~kgckWSPDGSciL~~sedn~l~~~nlP~dlys~~~-~~~~~~~~~~~~r~~---------------------------- 102 (406)
T KOG2919|consen 52 LKGCKWSPDGSCILSLSEDNCLNCWNLPFDLYSKKA-DGPLNFSKHLSYRYQ---------------------------- 102 (406)
T ss_pred hccceeCCCCceEEeecccCeeeEEecChhhcccCC-CCccccccceeEEec----------------------------
Confidence 456789999999999999999999998642111000 000000001111111
Q ss_pred ecCCceEEEEE-------ecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccc---cEEEEEECCCCCEEEEecCCeE
Q psy12614 109 VTSGTCWCLSV-------HKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQG---RILCTAWHSSGDYLVTGCAAAV 178 (708)
Q Consensus 109 ~~~~~v~~~~~-------s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~---~v~~~~~s~d~~~l~~~~~d~i 178 (708)
....|...+| -|+..++|+.+.+.-|.+||.-+|++........|.. ...+++|+|||.+|++|....|
T Consensus 103 -eg~tvydy~wYs~M~s~qP~t~l~a~ssr~~PIh~wdaftG~lraSy~~ydh~de~taAhsL~Fs~DGeqlfaGykrci 181 (406)
T KOG2919|consen 103 -EGETVYDYCWYSRMKSDQPSTNLFAVSSRDQPIHLWDAFTGKLRASYRAYDHQDEYTAAHSLQFSPDGEQLFAGYKRCI 181 (406)
T ss_pred -cCCEEEEEEeeeccccCCCccceeeeccccCceeeeeccccccccchhhhhhHHhhhhheeEEecCCCCeEeecccceE
Confidence 1233444443 2677889999999999999999999863223333443 3568999999999998888899
Q ss_pred EEEEc-CCCceEEEEEecccCCCCCceeEEEEEEccCC--EEEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCC
Q psy12614 179 RVWDI-HKGHAIHKMSLDKSSKFSKNTAVWCVAFCADF--TIITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSED 255 (708)
Q Consensus 179 ~iwd~-~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~ 255 (708)
+++|. +.|+.-..+.....+.|+..+.+.+++|+|-. .+++|+....+-+|.-..+.++..+.+|.+.|+.+.|.++
T Consensus 182 rvFdt~RpGr~c~vy~t~~~~k~gq~giisc~a~sP~~~~~~a~gsY~q~~giy~~~~~~pl~llggh~gGvThL~~~ed 261 (406)
T KOG2919|consen 182 RVFDTSRPGRDCPVYTTVTKGKFGQKGIISCFAFSPMDSKTLAVGSYGQRVGIYNDDGRRPLQLLGGHGGGVTHLQWCED 261 (406)
T ss_pred EEeeccCCCCCCcchhhhhcccccccceeeeeeccCCCCcceeeecccceeeeEecCCCCceeeecccCCCeeeEEeccC
Confidence 99999 56654444433322233558889999999965 4889999999999998889999999999999999999999
Q ss_pred CCEEEEEec-CCeEEEEEccCCcccccCCCCCCCCcceEEeEEEecccc-ceEEEEEe----CCEEEEEcCCCeEEEEeC
Q psy12614 256 ENYLYCAGV-DPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEG-DVKSLALH----GNRLYSGGLDSYLSLSYY 329 (708)
Q Consensus 256 ~~~l~~~~~-dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~v~~l~~~----~~~l~s~~~d~~i~iw~~ 329 (708)
|+.|++|.. |-.|..||++. .. .++..+..|.. .=..|-|. ++.|++|+.||.|++||+
T Consensus 262 Gn~lfsGaRk~dkIl~WDiR~--------~~-------~pv~~L~rhv~~TNQRI~FDld~~~~~LasG~tdG~V~vwdl 326 (406)
T KOG2919|consen 262 GNKLFSGARKDDKILCWDIRY--------SR-------DPVYALERHVGDTNQRILFDLDPKGEILASGDTDGSVRVWDL 326 (406)
T ss_pred cCeecccccCCCeEEEEeehh--------cc-------chhhhhhhhccCccceEEEecCCCCceeeccCCCccEEEEec
Confidence 999999876 67899999987 21 13445556655 33455565 899999999999999999
Q ss_pred CCC-c-eeecCccCCCCceEEEEcCCcEEEEEcCCeEE
Q psy12614 330 PPK-T-LVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLE 365 (708)
Q Consensus 330 ~~~-~-~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~ 365 (708)
... . ...+.....-...+++.|--.++++++.+.+.
T Consensus 327 k~~gn~~sv~~~~sd~vNgvslnP~mpilatssGqr~f 364 (406)
T KOG2919|consen 327 KDLGNEVSVTGNYSDTVNGVSLNPIMPILATSSGQRIF 364 (406)
T ss_pred CCCCCcccccccccccccceecCcccceeeeccCceee
Confidence 873 2 22222223345678888887777777666543
|
|
| >KOG0270|consensus | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.5e-20 Score=171.52 Aligned_cols=276 Identities=16% Similarity=0.251 Sum_probs=201.1
Q ss_pred EEEEEcCCCCEEEEEeCC---Cc--EEEEeCCCCCeEEEEEecCC--CCCcEEEEEEe---------CCEEEEEcCCCcE
Q psy12614 30 NCIACEPKSSRLAVSRAD---QS--IEIWDISETPHVDRVFIGDP--LSNSIECLTWF---------NDRLFSGGLQGFV 93 (708)
Q Consensus 30 ~~~~~s~~~~~la~~~~d---g~--v~iwd~~~~~~~~~~~~~h~--~~~~v~~l~~~---------~~~l~s~~~d~~i 93 (708)
-.+.+-|+.+++++|... .. |.+|+-.... .+--|. +...-.|++|. |+++|.|+.|..|
T Consensus 129 de~~V~psDnlIl~ar~eddvs~LEvYVyn~~e~n----lYvHHD~ilpafPLC~ewld~~~~~~~~gNyvAiGtmdp~I 204 (463)
T KOG0270|consen 129 DEEQVKPSDNLILCARNEDDVSYLEVYVYNEEEEN----LYVHHDFILPAFPLCIEWLDHGSKSGGAGNYVAIGTMDPEI 204 (463)
T ss_pred ccceeccCCcEEEEeeccCCceEEEEEEEcCCCcc----eeEecceeccCcchhhhhhhcCCCCCCCcceEEEeccCcee
Confidence 345667777777776433 22 4555544311 111122 12344666665 7899999999999
Q ss_pred EEEECCCCe---EeEE------------------EeecCCceEEEEEecC-CCEEEEEeCCCcEEEEEccCCcEEEEEec
Q psy12614 94 NEYDMRRLN---IKSS------------------TAVTSGTCWCLSVHKK-KRLLAAGTEQGHINLFQISDEGLLYEKLL 151 (708)
Q Consensus 94 ~vwd~~~~~---~~~~------------------~~~~~~~v~~~~~s~~-~~~la~~~~d~~i~iwd~~~~~~~~~~~~ 151 (708)
.|||+.-.. +..+ -.+|+..|.+++|+.. .+.||+|+.|.+|++||+.++++. .++
T Consensus 205 eIWDLDI~d~v~P~~~LGs~~sk~~~k~~k~~~~~~gHTdavl~Ls~n~~~~nVLaSgsaD~TV~lWD~~~g~p~--~s~ 282 (463)
T KOG0270|consen 205 EIWDLDIVDAVLPCVTLGSKASKKKKKKGKRSNSASGHTDAVLALSWNRNFRNVLASGSADKTVKLWDVDTGKPK--SSI 282 (463)
T ss_pred EEeccccccccccceeechhhhhhhhhhcccccccccchHHHHHHHhccccceeEEecCCCceEEEEEcCCCCcc--eeh
Confidence 999975421 1111 2268888989999875 457899999999999999999997 788
Q ss_pred ccccccEEEEEECCC-CCEEEEecCC-eEEEEEcCCCc-eEEEEEecccCCCCCceeEEEEEEccCC--EEEEEcCCCcE
Q psy12614 152 DRQQGRILCTAWHSS-GDYLVTGCAA-AVRVWDIHKGH-AIHKMSLDKSSKFSKNTAVWCVAFCADF--TIITGDSGGFV 226 (708)
Q Consensus 152 ~~~~~~v~~~~~s~d-~~~l~~~~~d-~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~l~~~~~dg~i 226 (708)
..|.+.|.++.|+|. ..+|++|+.| ++.+.|.+... .-..++. .+.|-.++|.|.. .++++..||.|
T Consensus 283 ~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~~~s~~~wk~--------~g~VEkv~w~~~se~~f~~~tddG~v 354 (463)
T KOG0270|consen 283 THHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRDPSNSGKEWKF--------DGEVEKVAWDPHSENSFFVSTDDGTV 354 (463)
T ss_pred hhcCCceeEEEecCCCceEEEeccccceEEeeeccCccccCceEEe--------ccceEEEEecCCCceeEEEecCCceE
Confidence 889999999999986 4788999999 99999998422 2222222 6779999999977 38899999999
Q ss_pred EEEeCCCC-eeEEEeeccccCeEEEEEeCCC-CEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccc
Q psy12614 227 RFWDGKTG-VQWSDVKTHKKDILALTVSEDE-NYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGD 304 (708)
Q Consensus 227 ~~wd~~~~-~~~~~~~~~~~~i~~~~~s~~~-~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 304 (708)
+-+|++.. +++.+++.|.++|.++++++.. .++++++.|+.+++|++.. .+ ++....+.+. -+.
T Consensus 355 ~~~D~R~~~~~vwt~~AHd~~ISgl~~n~~~p~~l~t~s~d~~Vklw~~~~--------~~----~~~v~~~~~~--~~r 420 (463)
T KOG0270|consen 355 YYFDIRNPGKPVWTLKAHDDEISGLSVNIQTPGLLSTASTDKVVKLWKFDV--------DS----PKSVKEHSFK--LGR 420 (463)
T ss_pred EeeecCCCCCceeEEEeccCCcceEEecCCCCcceeeccccceEEEEeecC--------CC----Cccccccccc--ccc
Confidence 99999875 8899999999999999998865 5788999999999999987 21 1111111111 122
Q ss_pred eEEEEEe---CCEEEEEcCCCeEEEEeCCCCc
Q psy12614 305 VKSLALH---GNRLYSGGLDSYLSLSYYPPKT 333 (708)
Q Consensus 305 v~~l~~~---~~~l~s~~~d~~i~iw~~~~~~ 333 (708)
..|.++. ...++.||..+.+++||+.+..
T Consensus 421 l~c~~~~~~~a~~la~GG~k~~~~vwd~~~~~ 452 (463)
T KOG0270|consen 421 LHCFALDPDVAFTLAFGGEKAVLRVWDIFTNS 452 (463)
T ss_pred eeecccCCCcceEEEecCccceEEEeecccCh
Confidence 3344444 6788999999999999987654
|
|
| >KOG1009|consensus | Back alignment and domain information |
|---|
Probab=99.88 E-value=6.6e-20 Score=166.86 Aligned_cols=300 Identities=15% Similarity=0.190 Sum_probs=209.6
Q ss_pred CCcEEEEEEe---CCEEEEEcCCCcEEEEECCCCe---------EeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEE
Q psy12614 71 SNSIECLTWF---NDRLFSGGLQGFVNEYDMRRLN---------IKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLF 138 (708)
Q Consensus 71 ~~~v~~l~~~---~~~l~s~~~d~~i~vwd~~~~~---------~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iw 138 (708)
..+|..+.|. .++|++|+.|..|++|-++.+. .+..+..|...|+++.|+|+|..||+|+++|.|.+|
T Consensus 13 ~~pv~s~dfq~n~~~~laT~G~D~~iriW~v~r~~~~~~~~~V~y~s~Ls~H~~aVN~vRf~p~gelLASg~D~g~v~lW 92 (434)
T KOG1009|consen 13 HEPVYSVDFQKNSLNKLATAGGDKDIRIWKVNRSEPGGGDMKVEYLSSLSRHTRAVNVVRFSPDGELLASGGDGGEVFLW 92 (434)
T ss_pred CCceEEEEeccCcccceecccCccceeeeeeeecCCCCCceeEEEeecccCCcceeEEEEEcCCcCeeeecCCCceEEEE
Confidence 4689999998 4589999999999999876543 244567899999999999999999999999999999
Q ss_pred Ecc--------C------CcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCc
Q psy12614 139 QIS--------D------EGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKN 203 (708)
Q Consensus 139 d~~--------~------~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~ 203 (708)
-.. + ...+..+.+.+|...|..++|+||+.++++++.| .+++||+..|.....+. .|.
T Consensus 93 k~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~diydL~Ws~d~~~l~s~s~dns~~l~Dv~~G~l~~~~~-------dh~ 165 (434)
T KOG1009|consen 93 KQGDVRIFDADTEADLNKEKWVVKKVLRGHRDDIYDLAWSPDSNFLVSGSVDNSVRLWDVHAGQLLAILD-------DHE 165 (434)
T ss_pred EecCcCCccccchhhhCccceEEEEEecccccchhhhhccCCCceeeeeeccceEEEEEeccceeEeecc-------ccc
Confidence 876 2 2244557788999999999999999999999999 99999999999988776 448
Q ss_pred eeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCeeEEEee-------------------cc----ccCeEEEEEeCCCCEE
Q psy12614 204 TAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDVK-------------------TH----KKDILALTVSEDENYL 259 (708)
Q Consensus 204 ~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~~-------------------~~----~~~i~~~~~s~~~~~l 259 (708)
..+..++|.|-++ +++-+.|...+.+.+...+.+.... .| ..-...++|+|||.+|
T Consensus 166 ~yvqgvawDpl~qyv~s~s~dr~~~~~~~~~~~~~~~~~~~~m~~~~~~~~e~~s~rLfhDeTlksFFrRlsfTPdG~ll 245 (434)
T KOG1009|consen 166 HYVQGVAWDPLNQYVASKSSDRHPEGFSAKLKQVIKRHGLDIMPAKAFNEREGKSTRLFHDETLKSFFRRLSFTPDGSLL 245 (434)
T ss_pred cccceeecchhhhhhhhhccCcccceeeeeeeeeeeeeeeeEeeecccCCCCcceeeeeecCchhhhhhhcccCCCCcEE
Confidence 8899999999886 7777777766666654433222111 01 1234567899999888
Q ss_pred EEEec----CCe-----EEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEeCCEEEEEcCCCeEEEEeCC
Q psy12614 260 YCAGV----DPT-----VVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALHGNRLYSGGLDSYLSLSYYP 330 (708)
Q Consensus 260 ~~~~~----dg~-----i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~s~~~d~~i~iw~~~ 330 (708)
++... .+. .++|+... - -.+...+......+..+.++.-+ +.+.
T Consensus 246 vtPag~~~~g~~~~~n~tYvfsrk~--------l-------~rP~~~lp~~~k~~lavr~~pVy------------~elr 298 (434)
T KOG1009|consen 246 VTPAGLFKVGGGVFRNTSYVFSRKD--------L-------KRPAARLPSPKKPALAVRFSPVY------------YELR 298 (434)
T ss_pred EcccceeeeCCceeeceeEeecccc--------c-------cCceeecCCCCcceEEEEeeeeE------------EEec
Confidence 86532 111 22232221 0 00122222222333333322111 1111
Q ss_pred CCceeecCccCCCCceEEEEcCCcEEEEEcCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEE
Q psy12614 331 PKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSV 410 (708)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 410 (708)
. ......+-.-|-+..++.+..+.+.+||.+... .+..+..-|-..|+.++
T Consensus 299 p---------~~~~~~~~~lpyrlvfaiAt~~svyvydtq~~~--------------------P~~~v~nihy~~iTDia 349 (434)
T KOG1009|consen 299 P---------LSSEKFLFVLPYRLVFAIATKNSVYVYDTQTLE--------------------PLAVVDNIHYSAITDIA 349 (434)
T ss_pred c---------ccccccccccccceEEEEeecceEEEecccccc--------------------ceEEEeeeeeeeeccee
Confidence 1 000011222244556667888999999998766 56666667889999999
Q ss_pred eCCCCcEEEEEc-CCceEEEEEEe
Q psy12614 411 VSNDGKYVAYST-ESCVRLHSLDL 433 (708)
Q Consensus 411 ~s~~g~~l~~~~-d~~i~i~~~~~ 433 (708)
|++||..++.++ ||...+-.++.
T Consensus 350 ws~dg~~l~vSS~DGyCS~vtfe~ 373 (434)
T KOG1009|consen 350 WSDDGSVLLVSSTDGFCSLVTFEP 373 (434)
T ss_pred ecCCCcEEEEeccCCceEEEEEcc
Confidence 999999999855 99988888776
|
|
| >KOG1034|consensus | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.9e-20 Score=165.55 Aligned_cols=294 Identities=14% Similarity=0.187 Sum_probs=209.3
Q ss_pred eeccCCCCcEEEEEEcC-----CCCEEEEEeCCCcEEEEeCCCCC---eEEEEEe-cCCCCCcEEEEEEe------CCEE
Q psy12614 20 KFYAPEPKVINCIACEP-----KSSRLAVSRADQSIEIWDISETP---HVDRVFI-GDPLSNSIECLTWF------NDRL 84 (708)
Q Consensus 20 ~~~~~h~~~v~~~~~s~-----~~~~la~~~~dg~v~iwd~~~~~---~~~~~~~-~h~~~~~v~~l~~~------~~~l 84 (708)
++...|..+|..++|++ +-..+|+++.+ .+.||+....- .++.... .|. .....++|+ ..+|
T Consensus 32 ~l~ed~~~~I~gv~fN~~~~~~e~~vfatvG~~-rvtiy~c~~d~~ir~lq~y~D~d~~--Esfytcsw~yd~~~~~p~l 108 (385)
T KOG1034|consen 32 HLKEDHNKPIFGVAFNSFLGCDEPQVFATVGGN-RVTIYECPGDGGIRLLQSYADEDHD--ESFYTCSWSYDSNTGNPFL 108 (385)
T ss_pred ehhccCCCccceeeeehhcCCCCCceEEEeCCc-EEEEEEECCccceeeeeeccCCCCC--cceEEEEEEecCCCCCeeE
Confidence 45678999999999985 23456666654 89999887533 2221222 255 788889998 4578
Q ss_pred EEEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEecCC-CEEEEEeCCCcEEEEEccCCcEEEE-EecccccccEEEEE
Q psy12614 85 FSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKK-RLLAAGTEQGHINLFQISDEGLLYE-KLLDRQQGRILCTA 162 (708)
Q Consensus 85 ~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~-~~la~~~~d~~i~iwd~~~~~~~~~-~~~~~~~~~v~~~~ 162 (708)
|.+|.-|.|+|.|+.++++...+.+|+..|+.+.|.|+. +++++++.|.+|++|++++..++.. .-..+|.+.|.++.
T Consensus 109 a~~G~~GvIrVid~~~~~~~~~~~ghG~sINeik~~p~~~qlvls~SkD~svRlwnI~~~~Cv~VfGG~egHrdeVLSvD 188 (385)
T KOG1034|consen 109 AAGGYLGVIRVIDVVSGQCSKNYRGHGGSINEIKFHPDRPQLVLSASKDHSVRLWNIQTDVCVAVFGGVEGHRDEVLSVD 188 (385)
T ss_pred EeecceeEEEEEecchhhhccceeccCccchhhhcCCCCCcEEEEecCCceEEEEeccCCeEEEEecccccccCcEEEEE
Confidence 999999999999999999999999999999999999976 5788999999999999999988621 23567999999999
Q ss_pred ECCCCCEEEEecCC-eEEEEEcCCCceEEEEEec----cc----------CCC-------CCceeEEEEEEccCCEEEEE
Q psy12614 163 WHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLD----KS----------SKF-------SKNTAVWCVAFCADFTIITG 220 (708)
Q Consensus 163 ~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~----~~----------~~~-------~~~~~v~~~~~~~~~~l~~~ 220 (708)
|+++|.+|++++.| ++++|++...+....+... .. .+| -|...|-|+.|.-| -+++-
T Consensus 189 ~~~~gd~i~ScGmDhslk~W~l~~~~f~~~lE~s~~~~~~~t~~pfpt~~~~fp~fst~diHrnyVDCvrw~gd-~ilSk 267 (385)
T KOG1034|consen 189 FSLDGDRIASCGMDHSLKLWRLNVKEFKNKLELSITYSPNKTTRPFPTPKTHFPDFSTTDIHRNYVDCVRWFGD-FILSK 267 (385)
T ss_pred EcCCCCeeeccCCcceEEEEecChhHHhhhhhhhcccCCCCccCcCCccccccccccccccccchHHHHHHHhh-heeec
Confidence 99999999999999 9999999843221111100 00 000 12333444444321 25677
Q ss_pred cCCCcEEEEeC-CCCe-------------eEEEeeccccCeEE--EEEeCCCCEEEEEecCCeEEEEEccCCcccccCCC
Q psy12614 221 DSGGFVRFWDG-KTGV-------------QWSDVKTHKKDILA--LTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSG 284 (708)
Q Consensus 221 ~~dg~i~~wd~-~~~~-------------~~~~~~~~~~~i~~--~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g 284 (708)
+-++.|..|.. +-++ .+..+.-....|.- .+|.|-++.||.|...|.+.+||++. .
T Consensus 268 scenaI~~w~pgkl~e~~~~vkp~es~~Ti~~~~~~~~c~iWfirf~~d~~~~~la~gnq~g~v~vwdL~~--------~ 339 (385)
T KOG1034|consen 268 SCENAIVCWKPGKLEESIHNVKPPESATTILGEFDYPMCDIWFIRFAFDPWQKMLALGNQSGKVYVWDLDN--------N 339 (385)
T ss_pred ccCceEEEEecchhhhhhhccCCCccceeeeeEeccCccceEEEEEeecHHHHHHhhccCCCcEEEEECCC--------C
Confidence 77889999986 1111 12223333334444 45566678999999999999999998 3
Q ss_pred CCCCCcceEEeEEEeccccceEEEEEe--CCEEEEEcCCCeEEEEeC
Q psy12614 285 PEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSGGLDSYLSLSYY 329 (708)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~~~d~~i~iw~~ 329 (708)
+ +.-.....-......|+..+|+ +..|+....|++|.-||.
T Consensus 340 e----p~~~ttl~~s~~~~tVRQ~sfS~dgs~lv~vcdd~~Vwrwdr 382 (385)
T KOG1034|consen 340 E----PPKCTTLTHSKSGSTVRQTSFSRDGSILVLVCDDGTVWRWDR 382 (385)
T ss_pred C----CccCceEEeccccceeeeeeecccCcEEEEEeCCCcEEEEEe
Confidence 2 1111111222234568888998 899999999999999986
|
|
| >KOG0321|consensus | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.2e-20 Score=181.37 Aligned_cols=284 Identities=17% Similarity=0.178 Sum_probs=206.4
Q ss_pred EEEec---CCCEEEEEeCCCcEEEEEccCCcEE----EEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCce
Q psy12614 117 LSVHK---KKRLLAAGTEQGHINLFQISDEGLL----YEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHA 188 (708)
Q Consensus 117 ~~~s~---~~~~la~~~~d~~i~iwd~~~~~~~----~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~ 188 (708)
..|++ ....||.+.+||.|.++|....... .......|.+.|..+.|.|....|++++.| ++++||+++++.
T Consensus 55 ~sFs~~~n~eHiLavadE~G~i~l~dt~~~~fr~ee~~lk~~~aH~nAifDl~wapge~~lVsasGDsT~r~Wdvk~s~l 134 (720)
T KOG0321|consen 55 DSFSAAPNKEHILAVADEDGGIILFDTKSIVFRLEERQLKKPLAHKNAIFDLKWAPGESLLVSASGDSTIRPWDVKTSRL 134 (720)
T ss_pred ccccCCCCccceEEEecCCCceeeecchhhhcchhhhhhcccccccceeEeeccCCCceeEEEccCCceeeeeeecccee
Confidence 55655 2347899999999999998754332 114556799999999999977889999999 999999999888
Q ss_pred EEEEEecccCCCCCceeEEEEEEccCCE--EEEEcCCCcEEEEeCCCCee---------------------------EEE
Q psy12614 189 IHKMSLDKSSKFSKNTAVWCVAFCADFT--IITGDSGGFVRFWDGKTGVQ---------------------------WSD 239 (708)
Q Consensus 189 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~--l~~~~~dg~i~~wd~~~~~~---------------------------~~~ 239 (708)
...-... +|...+.+++|.|.+. |++|+.||.|.|||++.... +..
T Consensus 135 ~G~~~~~-----GH~~SvkS~cf~~~n~~vF~tGgRDg~illWD~R~n~~d~~e~~~~~~~~~~n~~ptpskp~~kr~~k 209 (720)
T KOG0321|consen 135 VGGRLNL-----GHTGSVKSECFMPTNPAVFCTGGRDGEILLWDCRCNGVDALEEFDNRIYGRHNTAPTPSKPLKKRIRK 209 (720)
T ss_pred ecceeec-----ccccccchhhhccCCCcceeeccCCCcEEEEEEeccchhhHHHHhhhhhccccCCCCCCchhhccccc
Confidence 7763222 5699999999999884 89999999999999864320 011
Q ss_pred eeccccCeEE---EEEeCCCCEEEEEec-CCeEEEEEccCCcccccCCCCCCCCcceEEeEEEecc---ccceEEEEEe-
Q psy12614 240 VKTHKKDILA---LTVSEDENYLYCAGV-DPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIH---EGDVKSLALH- 311 (708)
Q Consensus 240 ~~~~~~~i~~---~~~s~~~~~l~~~~~-dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~---~~~v~~l~~~- 311 (708)
-..+...|.+ +.+..|...||+++. |+.|++||++.... ...+ .......+..| ...+.++..+
T Consensus 210 ~kA~s~ti~ssvTvv~fkDe~tlaSaga~D~~iKVWDLRk~~~--~~r~------ep~~~~~~~t~skrs~G~~nL~lDs 281 (720)
T KOG0321|consen 210 WKAASNTIFSSVTVVLFKDESTLASAGAADSTIKVWDLRKNYT--AYRQ------EPRGSDKYPTHSKRSVGQVNLILDS 281 (720)
T ss_pred cccccCceeeeeEEEEEeccceeeeccCCCcceEEEeeccccc--cccc------CCCcccCccCcccceeeeEEEEecC
Confidence 1234445555 556678889999888 99999999987111 1111 11122233333 3346666666
Q ss_pred -CCEEEEEcCCCeEEEEeCCCCceeecCccCCCC-----ceEEEEcCCcEEEEE-cCCeEEEEEecCCCCCCCCCCCCCC
Q psy12614 312 -GNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQS-----TPVSLAKDIQHVLLQ-YTSHLELWSLGSAQSTDLSSHSNTT 384 (708)
Q Consensus 312 -~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~-----~~~~~s~~~~~l~~~-~~~~i~i~~~~~~~~~~~~~~~~~~ 384 (708)
|.+|...+.|+.|..|++......-.....+.. ..-..+|++.+++++ .+....+|.+...+
T Consensus 282 sGt~L~AsCtD~sIy~ynm~s~s~sP~~~~sg~~~~sf~vks~lSpd~~~l~SgSsd~~ayiw~vs~~e----------- 350 (720)
T KOG0321|consen 282 SGTYLFASCTDNSIYFYNMRSLSISPVAEFSGKLNSSFYVKSELSPDDCSLLSGSSDEQAYIWVVSSPE----------- 350 (720)
T ss_pred CCCeEEEEecCCcEEEEeccccCcCchhhccCcccceeeeeeecCCCCceEeccCCCcceeeeeecCcc-----------
Confidence 889888888999999999876543333222222 235678999999996 88999999999866
Q ss_pred cccCCCCceEEEEEEecCCCceEEEEeCC--CCcEEEEEcCCceEEEEEEe
Q psy12614 385 GVPLLSFPRLIVKMSAVNNATIRCSVVSN--DGKYVAYSTESCVRLHSLDL 433 (708)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~i~~~~~s~--~g~~l~~~~d~~i~i~~~~~ 433 (708)
.-..+..+|.-.|++++|.| ....+++++|.++++|++..
T Consensus 351 ---------~~~~~l~Ght~eVt~V~w~pS~~t~v~TcSdD~~~kiW~l~~ 392 (720)
T KOG0321|consen 351 ---------APPALLLGHTREVTTVRWLPSATTPVATCSDDFRVKIWRLSN 392 (720)
T ss_pred ---------CChhhhhCcceEEEEEeeccccCCCceeeccCcceEEEeccC
Confidence 34445568888999999865 56677778899999999965
|
|
| >KOG4378|consensus | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.9e-20 Score=174.30 Aligned_cols=263 Identities=14% Similarity=0.207 Sum_probs=207.5
Q ss_pred CCcEEEEEEcCCCCEEEEE--eCCCcEEEEeCCCC--CeEE-EEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEEC
Q psy12614 26 PKVINCIACEPKSSRLAVS--RADQSIEIWDISET--PHVD-RVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDM 98 (708)
Q Consensus 26 ~~~v~~~~~s~~~~~la~~--~~dg~v~iwd~~~~--~~~~-~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~ 98 (708)
+..+.++.|+.... |+++ +.|..|++|.-... +... ..+.|. .-.|++.. ..++++|+..++|+|||+
T Consensus 34 ~pg~~s~~w~~~n~-lvvas~~gdk~~~~~~K~g~~~~Vp~~~k~~gd----~~~Cv~~~s~S~y~~sgG~~~~Vkiwdl 108 (673)
T KOG4378|consen 34 EPGDFSFNWQRRNF-LVVASMAGDKVMRIKEKDGKTPEVPRVRKLTGD----NAFCVACASQSLYEISGGQSGCVKIWDL 108 (673)
T ss_pred CCcceeeeccccce-EEEeecCCceeEEEecccCCCCccceeeccccc----hHHHHhhhhcceeeeccCcCceeeehhh
Confidence 34499999987764 4444 56778999976543 2221 122232 23444443 689999999999999999
Q ss_pred CCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccc-cccEEEEEECCCCCEEE-EecCC
Q psy12614 99 RRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQ-QGRILCTAWHSSGDYLV-TGCAA 176 (708)
Q Consensus 99 ~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~-~~~v~~~~~s~d~~~l~-~~~~d 176 (708)
+...+.+.++.|...|+++.++....+||+++..|.|.|-.+.++... ..|... ...|.-+.|+|..+.++ +++.+
T Consensus 109 ~~kl~hr~lkdh~stvt~v~YN~~DeyiAsvs~gGdiiih~~~t~~~t--t~f~~~sgqsvRll~ys~skr~lL~~asd~ 186 (673)
T KOG4378|consen 109 RAKLIHRFLKDHQSTVTYVDYNNTDEYIASVSDGGDIIIHGTKTKQKT--TTFTIDSGQSVRLLRYSPSKRFLLSIASDK 186 (673)
T ss_pred HHHHHhhhccCCcceeEEEEecCCcceeEEeccCCcEEEEecccCccc--cceecCCCCeEEEeecccccceeeEeeccC
Confidence 988888999999999999999999999999999999999999988764 444433 34566899999887665 56666
Q ss_pred -eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE--EEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEe
Q psy12614 177 -AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT--IITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVS 253 (708)
Q Consensus 177 -~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s 253 (708)
.|.+||+.....+...... |..+...++|+|.+. +++.+.|..|.+||....+....+. -..+...++|+
T Consensus 187 G~VtlwDv~g~sp~~~~~~~------HsAP~~gicfspsne~l~vsVG~Dkki~~yD~~s~~s~~~l~-y~~Plstvaf~ 259 (673)
T KOG4378|consen 187 GAVTLWDVQGMSPIFHASEA------HSAPCRGICFSPSNEALLVSVGYDKKINIYDIRSQASTDRLT-YSHPLSTVAFS 259 (673)
T ss_pred CeEEEEeccCCCcccchhhh------ccCCcCcceecCCccceEEEecccceEEEeecccccccceee-ecCCcceeeec
Confidence 9999999888777766553 388899999999874 8899999999999998777666665 46788999999
Q ss_pred CCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe-CCEEEE
Q psy12614 254 EDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH-GNRLYS 317 (708)
Q Consensus 254 ~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~-~~~l~s 317 (708)
++|.+|+.|...|.|..||++. -+ .+...+..|...|++++|- ...+++
T Consensus 260 ~~G~~L~aG~s~G~~i~YD~R~--------~k-------~Pv~v~sah~~sVt~vafq~s~tvlt 309 (673)
T KOG4378|consen 260 ECGTYLCAGNSKGELIAYDMRS--------TK-------APVAVRSAHDASVTRVAFQPSPTVLT 309 (673)
T ss_pred CCceEEEeecCCceEEEEeccc--------CC-------CCceEeeecccceeEEEeeecceeee
Confidence 9999999999999999999997 22 2567788899999999998 434443
|
|
| >KOG4378|consensus | Back alignment and domain information |
|---|
Probab=99.86 E-value=5.3e-20 Score=171.38 Aligned_cols=263 Identities=11% Similarity=0.210 Sum_probs=193.3
Q ss_pred EEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe-CCEEEEE--cCCCcEEEEECCCC--e--EeEEEeecCC
Q psy12614 40 RLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF-NDRLFSG--GLQGFVNEYDMRRL--N--IKSSTAVTSG 112 (708)
Q Consensus 40 ~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~-~~~l~s~--~~d~~i~vwd~~~~--~--~~~~~~~~~~ 112 (708)
+.+..+.| .++|||+..-+... .+..|.-.-.+.++.|+ .+.|+++ +.|..+++|.-... + .+....+ .
T Consensus 5 l~~aS~gd-~~kl~D~s~~~~~~-~~~~~t~~pg~~s~~w~~~n~lvvas~~gdk~~~~~~K~g~~~~Vp~~~k~~g--d 80 (673)
T KOG4378|consen 5 LHVASTGD-KTKLSDFSDLETKS-EYVHQTAEPGDFSFNWQRRNFLVVASMAGDKVMRIKEKDGKTPEVPRVRKLTG--D 80 (673)
T ss_pred eeeeccCC-ceEEeecccccCcc-ccccCCCCCcceeeeccccceEEEeecCCceeEEEecccCCCCccceeecccc--c
Confidence 33333334 79999998754433 22223223459999999 6656655 56888999974433 1 1222222 2
Q ss_pred ceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEE
Q psy12614 113 TCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHK 191 (708)
Q Consensus 113 ~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~ 191 (708)
.-.|++......++++|+..+.|+|||++...+. +.+.+|...|+++.++-...|||+++.. .|.|-.+.++.....
T Consensus 81 ~~~Cv~~~s~S~y~~sgG~~~~Vkiwdl~~kl~h--r~lkdh~stvt~v~YN~~DeyiAsvs~gGdiiih~~~t~~~tt~ 158 (673)
T KOG4378|consen 81 NAFCVACASQSLYEISGGQSGCVKIWDLRAKLIH--RFLKDHQSTVTYVDYNNTDEYIASVSDGGDIIIHGTKTKQKTTT 158 (673)
T ss_pred hHHHHhhhhcceeeeccCcCceeeehhhHHHHHh--hhccCCcceeEEEEecCCcceeEEeccCCcEEEEecccCccccc
Confidence 3445555555589999999999999999966555 7899999999999999999999999999 999999999888887
Q ss_pred EEecccCCCCCceeEEEEEEccCCE--EEEEcCCCcEEEEeCCCCeeEEE-eeccccCeEEEEEeCCC-CEEEEEecCCe
Q psy12614 192 MSLDKSSKFSKNTAVWCVAFCADFT--IITGDSGGFVRFWDGKTGVQWSD-VKTHKKDILALTVSEDE-NYLYCAGVDPT 267 (708)
Q Consensus 192 ~~~~~~~~~~~~~~v~~~~~~~~~~--l~~~~~dg~i~~wd~~~~~~~~~-~~~~~~~i~~~~~s~~~-~~l~~~~~dg~ 267 (708)
+..+. ...+.-+.|+|..+ |.+++.+|.|.+||+....++.. ...|..+...++|+|.. .+|++.+.|..
T Consensus 159 f~~~s------gqsvRll~ys~skr~lL~~asd~G~VtlwDv~g~sp~~~~~~~HsAP~~gicfspsne~l~vsVG~Dkk 232 (673)
T KOG4378|consen 159 FTIDS------GQSVRLLRYSPSKRFLLSIASDKGAVTLWDVQGMSPIFHASEAHSAPCRGICFSPSNEALLVSVGYDKK 232 (673)
T ss_pred eecCC------CCeEEEeecccccceeeEeeccCCeEEEEeccCCCcccchhhhccCCcCcceecCCccceEEEecccce
Confidence 77653 55677889999875 77899999999999987666544 45799999999999965 57788999999
Q ss_pred EEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEEEcCCCeEEEEeCCC
Q psy12614 268 VVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSGGLDSYLSLSYYPP 331 (708)
Q Consensus 268 i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~ 331 (708)
|.+||... .. .........+..+++|. |.+|+.|...|.|..||++.
T Consensus 233 i~~yD~~s--------~~---------s~~~l~y~~Plstvaf~~~G~~L~aG~s~G~~i~YD~R~ 281 (673)
T KOG4378|consen 233 INIYDIRS--------QA---------STDRLTYSHPLSTVAFSECGTYLCAGNSKGELIAYDMRS 281 (673)
T ss_pred EEEeeccc--------cc---------ccceeeecCCcceeeecCCceEEEeecCCceEEEEeccc
Confidence 99999987 21 11222334566777777 67777777777777777654
|
|
| >KOG0270|consensus | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.2e-20 Score=171.87 Aligned_cols=237 Identities=16% Similarity=0.224 Sum_probs=181.0
Q ss_pred cEEEEEEcC-------CCCEEEEEeCCCcEEEEeCCCCCe--EE------------------EEEecCCCCCcEEEEEEe
Q psy12614 28 VINCIACEP-------KSSRLAVSRADQSIEIWDISETPH--VD------------------RVFIGDPLSNSIECLTWF 80 (708)
Q Consensus 28 ~v~~~~~s~-------~~~~la~~~~dg~v~iwd~~~~~~--~~------------------~~~~~h~~~~~v~~l~~~ 80 (708)
.-.|++|.. .|+|+|+|+.|..|.|||+.-... .. ..-.+|. ..|.+|+|+
T Consensus 175 fPLC~ewld~~~~~~~~gNyvAiGtmdp~IeIWDLDI~d~v~P~~~LGs~~sk~~~k~~k~~~~~~gHT--davl~Ls~n 252 (463)
T KOG0270|consen 175 FPLCIEWLDHGSKSGGAGNYVAIGTMDPEIEIWDLDIVDAVLPCVTLGSKASKKKKKKGKRSNSASGHT--DAVLALSWN 252 (463)
T ss_pred cchhhhhhhcCCCCCCCcceEEEeccCceeEEeccccccccccceeechhhhhhhhhhcccccccccch--HHHHHHHhc
Confidence 335666643 368999999999999999963111 00 1123687 889999999
Q ss_pred ---CCEEEEEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEecC-CCEEEEEeCCCcEEEEEccCCcEEEEEecccccc
Q psy12614 81 ---NDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKK-KRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQG 156 (708)
Q Consensus 81 ---~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~-~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~ 156 (708)
.+.||||+.|.+|++||+.++++..++..|++.|.+++|+|. ...|++|+.|++|.+.|.+..... ...-...+
T Consensus 253 ~~~~nVLaSgsaD~TV~lWD~~~g~p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~~~s--~~~wk~~g 330 (463)
T KOG0270|consen 253 RNFRNVLASGSADKTVKLWDVDTGKPKSSITHHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRDPSNS--GKEWKFDG 330 (463)
T ss_pred cccceeEEecCCCceEEEEEcCCCCcceehhhcCCceeEEEecCCCceEEEeccccceEEeeeccCcccc--CceEEecc
Confidence 889999999999999999999999999999999999999995 568899999999999999842221 11112357
Q ss_pred cEEEEEECCCCCEE-EEecCC-eEEEEEcCCC-ceEEEEEecccCCCCCceeEEEEEEccCC--EEEEEcCCCcEEEEeC
Q psy12614 157 RILCTAWHSSGDYL-VTGCAA-AVRVWDIHKG-HAIHKMSLDKSSKFSKNTAVWCVAFCADF--TIITGDSGGFVRFWDG 231 (708)
Q Consensus 157 ~v~~~~~s~d~~~l-~~~~~d-~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~l~~~~~dg~i~~wd~ 231 (708)
.|-.++|.|..... +++..| +++-+|+++. +++.++..+ ...|.++++++.. .+++++.++.|++|++
T Consensus 331 ~VEkv~w~~~se~~f~~~tddG~v~~~D~R~~~~~vwt~~AH-------d~~ISgl~~n~~~p~~l~t~s~d~~Vklw~~ 403 (463)
T KOG0270|consen 331 EVEKVAWDPHSENSFFVSTDDGTVYYFDIRNPGKPVWTLKAH-------DDEISGLSVNIQTPGLLSTASTDKVVKLWKF 403 (463)
T ss_pred ceEEEEecCCCceeEEEecCCceEEeeecCCCCCceeEEEec-------cCCcceEEecCCCCcceeeccccceEEEEee
Confidence 79999999977554 445556 9999999875 788888754 8899999998854 5889999999999998
Q ss_pred CCCee--EEEeeccccCeEEEEEeCCCC-EEEEEecCCeEEEEEccC
Q psy12614 232 KTGVQ--WSDVKTHKKDILALTVSEDEN-YLYCAGVDPTVVCFQRTR 275 (708)
Q Consensus 232 ~~~~~--~~~~~~~~~~i~~~~~s~~~~-~l~~~~~dg~i~iw~~~~ 275 (708)
..... +..-.-.-+...|+++.|+-. .++.|+..+.+++||+.+
T Consensus 404 ~~~~~~~v~~~~~~~~rl~c~~~~~~~a~~la~GG~k~~~~vwd~~~ 450 (463)
T KOG0270|consen 404 DVDSPKSVKEHSFKLGRLHCFALDPDVAFTLAFGGEKAVLRVWDIFT 450 (463)
T ss_pred cCCCCcccccccccccceeecccCCCcceEEEecCccceEEEeeccc
Confidence 64433 221111123356777788753 566788888899999987
|
|
| >KOG0307|consensus | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.7e-21 Score=200.37 Aligned_cols=282 Identities=18% Similarity=0.305 Sum_probs=217.2
Q ss_pred EEEEcCCCC-EEEEEe----------CCCcEEEEeCCC--CCeEEEEEecCCCCCcEEEEEEe--CC----EEEEEcCCC
Q psy12614 31 CIACEPKSS-RLAVSR----------ADQSIEIWDISE--TPHVDRVFIGDPLSNSIECLTWF--ND----RLFSGGLQG 91 (708)
Q Consensus 31 ~~~~s~~~~-~la~~~----------~dg~v~iwd~~~--~~~~~~~~~~h~~~~~v~~l~~~--~~----~l~s~~~d~ 91 (708)
.+||+|++. +||+|. .+.++.||.+.- ...-.+....+........|+|. +. .|+.|..||
T Consensus 11 ~~awSp~~~~~laagt~aq~~D~sfst~~slEifeld~~~~~~dlk~~~s~~s~~rF~kL~W~~~g~~~~GlIaGG~edG 90 (1049)
T KOG0307|consen 11 TFAWSPASPPLLAAGTAAQQFDASFSTSASLEIFELDFSDESSDLKPVGSLQSSNRFNKLAWGSYGSHSHGLIAGGLEDG 90 (1049)
T ss_pred eEEecCCCchhhHHHhhhhccccccccccccceeeecccCccccccccccccccccceeeeecccCCCccceeeccccCC
Confidence 578999987 676652 345677776653 22100112222224678999999 44 488899999
Q ss_pred cEEEEECCCC------eEeEEEeecCCceEEEEEecCCC-EEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEEC
Q psy12614 92 FVNEYDMRRL------NIKSSTAVTSGTCWCLSVHKKKR-LLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWH 164 (708)
Q Consensus 92 ~i~vwd~~~~------~~~~~~~~~~~~v~~~~~s~~~~-~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s 164 (708)
.|.+||...- ..+.+...|.+.|..+.|++.+. +||+|+.||.|.|||+.+-+..+...-....+.|.+++|+
T Consensus 91 ~I~ly~p~~~~~~~~~~~la~~~~h~G~V~gLDfN~~q~nlLASGa~~geI~iWDlnn~~tP~~~~~~~~~~eI~~lsWN 170 (1049)
T KOG0307|consen 91 NIVLYDPASIIANASEEVLATKSKHTGPVLGLDFNPFQGNLLASGADDGEILIWDLNKPETPFTPGSQAPPSEIKCLSWN 170 (1049)
T ss_pred ceEEecchhhccCcchHHHhhhcccCCceeeeeccccCCceeeccCCCCcEEEeccCCcCCCCCCCCCCCcccceEeccc
Confidence 9999997662 24567789999999999999765 9999999999999999986654211111235789999998
Q ss_pred CCC-CEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCC--EEEEEcCCC---cEEEEeCCCC-ee
Q psy12614 165 SSG-DYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADF--TIITGDSGG---FVRFWDGKTG-VQ 236 (708)
Q Consensus 165 ~d~-~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~l~~~~~dg---~i~~wd~~~~-~~ 236 (708)
..- ..|++++.+ .+.|||++..+.+-.+... .....+..++|+|++ ++++++.|. .|.+||++.- ..
T Consensus 171 rkvqhILAS~s~sg~~~iWDlr~~~pii~ls~~-----~~~~~~S~l~WhP~~aTql~~As~dd~~PviqlWDlR~assP 245 (1049)
T KOG0307|consen 171 RKVSHILASGSPSGRAVIWDLRKKKPIIKLSDT-----PGRMHCSVLAWHPDHATQLLVASGDDSAPVIQLWDLRFASSP 245 (1049)
T ss_pred hhhhHHhhccCCCCCceeccccCCCcccccccC-----CCccceeeeeeCCCCceeeeeecCCCCCceeEeecccccCCc
Confidence 765 456778888 9999999998888777654 223558899999998 466666543 6999998764 56
Q ss_pred EEEeeccccCeEEEEEeCCC-CEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe---C
Q psy12614 237 WSDVKTHKKDILALTVSEDE-NYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH---G 312 (708)
Q Consensus 237 ~~~~~~~~~~i~~~~~s~~~-~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~---~ 312 (708)
++++.+|...|.++.|++.+ .+|++++.|+.|.+|+.++ |+ .+..+......+..+.|+ .
T Consensus 246 ~k~~~~H~~GilslsWc~~D~~lllSsgkD~~ii~wN~~t--------gE--------vl~~~p~~~nW~fdv~w~pr~P 309 (1049)
T KOG0307|consen 246 LKILEGHQRGILSLSWCPQDPRLLLSSGKDNRIICWNPNT--------GE--------VLGELPAQGNWCFDVQWCPRNP 309 (1049)
T ss_pred hhhhcccccceeeeccCCCCchhhhcccCCCCeeEecCCC--------ce--------EeeecCCCCcceeeeeecCCCc
Confidence 77889999999999999977 8899999999999999999 86 667777777889999999 6
Q ss_pred CEEEEEcCCCeEEEEeCCCCc
Q psy12614 313 NRLYSGGLDSYLSLSYYPPKT 333 (708)
Q Consensus 313 ~~l~s~~~d~~i~iw~~~~~~ 333 (708)
..++.++.||.|-|+.+.+..
T Consensus 310 ~~~A~asfdgkI~I~sl~~~~ 330 (1049)
T KOG0307|consen 310 SVMAAASFDGKISIYSLQGTD 330 (1049)
T ss_pred chhhhheeccceeeeeeecCC
Confidence 689999999999999998765
|
|
| >KOG0322|consensus | Back alignment and domain information |
|---|
Probab=99.86 E-value=5.4e-21 Score=163.65 Aligned_cols=244 Identities=17% Similarity=0.206 Sum_probs=189.2
Q ss_pred eeccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe-CCEEEEEcCCCcEEEEEC
Q psy12614 20 KFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF-NDRLFSGGLQGFVNEYDM 98 (708)
Q Consensus 20 ~~~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~-~~~l~s~~~d~~i~vwd~ 98 (708)
..+.+|.+.|+++.|-.+++ |.+|...|.|++|++++.+.+. .+.++. ...|+.+.-. ++.|.+-+.|+.+.+|++
T Consensus 8 fvLRp~~~~v~s~~fqa~~r-L~sg~~~G~V~~w~lqt~r~~~-~~r~~g-~~~it~lq~~p~d~l~tqgRd~~L~lw~i 84 (323)
T KOG0322|consen 8 FVLRPHSSSVTSVLFQANER-LMSGLSVGIVKMWVLQTERDLP-LIRLFG-RLFITNLQSIPNDSLDTQGRDPLLILWTI 84 (323)
T ss_pred eEeccccchheehhhccchh-hhcccccceEEEEEeecCccch-hhhhhc-cceeeceeecCCcchhhcCCCceEEEEEc
Confidence 34569999999999998876 8899999999999999988765 677444 3788888877 899999999999999998
Q ss_pred CCCeEe--------------EEEe---------------------------------------ecCCceEEEEEec-CCC
Q psy12614 99 RRLNIK--------------SSTA---------------------------------------VTSGTCWCLSVHK-KKR 124 (708)
Q Consensus 99 ~~~~~~--------------~~~~---------------------------------------~~~~~v~~~~~s~-~~~ 124 (708)
..+..+ ..+. +..+.+.+..+.. ++.
T Consensus 85 a~s~~i~i~Si~~nslgFCrfSl~~~~k~~eqll~yp~rgsde~h~~D~g~~tqv~i~dd~~~~Klgsvmc~~~~~~c~s 164 (323)
T KOG0322|consen 85 AYSAFISIHSIVVNSLGFCRFSLVKKPKNSEQLLEYPSRGSDETHKQDGGDTTQVQIADDSERSKLGSVMCQDKDHACGS 164 (323)
T ss_pred cCcceEEEeeeeccccccccceeccCCCcchhheecCCcccchhhhhccCccceeEccCchhccccCceeeeeccccccc
Confidence 763211 0000 0012333333221 223
Q ss_pred --EEEEEeCCCcEEEEEccCCcEEE--------EEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCC--ceE--
Q psy12614 125 --LLAAGTEQGHINLFQISDEGLLY--------EKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKG--HAI-- 189 (708)
Q Consensus 125 --~la~~~~d~~i~iwd~~~~~~~~--------~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~--~~~-- 189 (708)
+|++|.++|.+.+||+.++..+. ......|..+|.++.|.+.-..=++++.+ .+..|+++.. ...
T Consensus 165 ~~lllaGyEsghvv~wd~S~~~~~~~~~~~~kv~~~~ash~qpvlsldyas~~~rGisgga~dkl~~~Sl~~s~gslq~~ 244 (323)
T KOG0322|consen 165 TFLLLAGYESGHVVIWDLSTGDKIIQLPQSSKVESPNASHKQPVLSLDYASSCDRGISGGADDKLVMYSLNHSTGSLQIR 244 (323)
T ss_pred eEEEEEeccCCeEEEEEccCCceeeccccccccccchhhccCcceeeeechhhcCCcCCCccccceeeeeccccCccccc
Confidence 46678889999999999874321 12345688999999998876666788888 8999988643 221
Q ss_pred EEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEecCCeE
Q psy12614 190 HKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTV 268 (708)
Q Consensus 190 ~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i 268 (708)
..+... ...+..+.+-||++ +++++.|+.|++|+.++.+++..++-|.+.|.+++|+|+.+.++.++.|+.|
T Consensus 245 ~e~~lk-------npGv~gvrIRpD~KIlATAGWD~RiRVyswrtl~pLAVLkyHsagvn~vAfspd~~lmAaaskD~rI 317 (323)
T KOG0322|consen 245 KEITLK-------NPGVSGVRIRPDGKILATAGWDHRIRVYSWRTLNPLAVLKYHSAGVNAVAFSPDCELMAAASKDARI 317 (323)
T ss_pred ceEEec-------CCCccceEEccCCcEEeecccCCcEEEEEeccCCchhhhhhhhcceeEEEeCCCCchhhhccCCceE
Confidence 122221 56688899999997 8899999999999999999999999999999999999999999999999999
Q ss_pred EEEEc
Q psy12614 269 VCFQR 273 (708)
Q Consensus 269 ~iw~~ 273 (708)
.+|++
T Consensus 318 SLWkL 322 (323)
T KOG0322|consen 318 SLWKL 322 (323)
T ss_pred Eeeec
Confidence 99986
|
|
| >KOG1524|consensus | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.2e-18 Score=162.31 Aligned_cols=470 Identities=11% Similarity=0.144 Sum_probs=287.8
Q ss_pred CCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe----------CCEEEEEcCCCcE
Q psy12614 24 PEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF----------NDRLFSGGLQGFV 93 (708)
Q Consensus 24 ~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~----------~~~l~s~~~d~~i 93 (708)
.|...|.|+.|+.+...+.+++.+..++-||+.+.......++. .-|....+- .+.++.++.||.+
T Consensus 12 r~~e~vc~v~w~~~eei~~~~dDh~~~~~~~~~~~s~~~~~~p~----df~pt~~h~~~rs~~~g~~~d~~~i~s~DGkf 87 (737)
T KOG1524|consen 12 RNSEKVCCVDWSSNEEIYFVSDDHQIFKWSDVSRDSVEVAKLPD----DFVPTDMHLGGRSSGGGKGSDTLLICSNDGRF 87 (737)
T ss_pred ccceeEEeecccccceEEEeccCceEEEeecccchhhhhhhCCc----ccCCccccccccccCCCCCcceEEEEcCCceE
Confidence 45666779999988887777765544455555443321111111 111111111 4578999999999
Q ss_pred EEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEe
Q psy12614 94 NEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTG 173 (708)
Q Consensus 94 ~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~ 173 (708)
.+-+ ..++..+.+..|.+.+.+-.|+|||.-|+++++||.|++|.-... +. .++.....+|.|++|.|+.+.++.+
T Consensus 88 ~il~-k~~rVE~sv~AH~~A~~~gRW~~dGtgLlt~GEDG~iKiWSrsGM-LR--Stl~Q~~~~v~c~~W~p~S~~vl~c 163 (737)
T KOG1524|consen 88 VILN-KSARVERSISAHAAAISSGRWSPDGAGLLTAGEDGVIKIWSRSGM-LR--STVVQNEESIRCARWAPNSNSIVFC 163 (737)
T ss_pred EEec-ccchhhhhhhhhhhhhhhcccCCCCceeeeecCCceEEEEeccch-HH--HHHhhcCceeEEEEECCCCCceEEe
Confidence 9987 456777788899999999999999999999999999999985543 22 4555667899999999999999888
Q ss_pred cCCeEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEE
Q psy12614 174 CAAAVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTV 252 (708)
Q Consensus 174 ~~d~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~ 252 (708)
..+.+.+=.+.-...+-+.+ .|++.|.++.|++.+. +++|+.|-..++||. .|+.+..-..|..+|++++|
T Consensus 164 ~g~h~~IKpL~~n~k~i~Wk-------AHDGiiL~~~W~~~s~lI~sgGED~kfKvWD~-~G~~Lf~S~~~ey~ITSva~ 235 (737)
T KOG1524|consen 164 QGGHISIKPLAANSKIIRWR-------AHDGLVLSLSWSTQSNIIASGGEDFRFKIWDA-QGANLFTSAAEEYAITSVAF 235 (737)
T ss_pred cCCeEEEeecccccceeEEe-------ccCcEEEEeecCccccceeecCCceeEEeecc-cCcccccCChhccceeeeee
Confidence 88877776666666665665 3489999999999886 889999999999996 47777777889999999999
Q ss_pred eCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEEEcCCCeEEEEeCC
Q psy12614 253 SEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSGGLDSYLSLSYYP 330 (708)
Q Consensus 253 s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~ 330 (708)
+|+ +.++.++. +++++=. ...+.|..++|+ |..++.|+..|.+.+--.-
T Consensus 236 npd-~~~~v~S~-nt~R~~~---------------------------p~~GSifnlsWS~DGTQ~a~gt~~G~v~~A~~i 286 (737)
T KOG1524|consen 236 NPE-KDYLLWSY-NTARFSS---------------------------PRVGSIFNLSWSADGTQATCGTSTGQLIVAYAI 286 (737)
T ss_pred ccc-cceeeeee-eeeeecC---------------------------CCccceEEEEEcCCCceeeccccCceEEEeeee
Confidence 999 55555553 3444222 234678889999 8888888888876653222
Q ss_pred CCc-----------------eeecC----cc-CCCCceEEEEcCCcEEEEEcCCeEEEEEecCCCCCCCCCCCCCCcccC
Q psy12614 331 PKT-----------------LVKYP----CT-LAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPL 388 (708)
Q Consensus 331 ~~~-----------------~~~~~----~~-~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~ 388 (708)
.+. ++.+. .. ......+.++-.-..+++.....+++|....-.
T Consensus 287 eq~l~~~n~~~t~~~r~~I~vrdV~~~v~d~LE~p~rv~k~sL~Y~hLvvaTs~qvyiys~knwn--------------- 351 (737)
T KOG1524|consen 287 EQQLVSGNLKATSKSRKSITVRDVATGVQDILEFPQRVVKFSLGYGHLVVATSLQVYIYSEKNWN--------------- 351 (737)
T ss_pred hhhhhhccceeEeeccceEEeehhhhhHHHHhhCccceeeeeeceeEEEEEeccEEEEEecCCcc---------------
Confidence 211 00000 00 011123444444556667777778887765433
Q ss_pred CCCceEEEEEEecCCCceEEEEeCCCCcEEEEEcCCceEEEEEEecCCcceeEEeecCCcccc-cceeEEEEEecCCCeE
Q psy12614 389 LSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYSTESCVRLHSLDLDGDKPQISRIKNLPAPLF-KSIFTHVLISADSTLL 467 (708)
Q Consensus 389 ~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~s~d~~~l 467 (708)
.| .+.. +....+.-+ -...+++...+...|.+|..+. ...+.. ++|+... ...-..+.+ ....|
T Consensus 352 --tp-iiid---gre~tr~li--eq~ek~fli~dgsSi~lytyeg---R~~~np--~~Pg~~~dlL~~rtlsL--andtL 416 (737)
T KOG1524|consen 352 --TP-IIID---GREDTRNLI--EQGEKYFLILDGSSIWLYTYEG---RLHLNP--RYPGSQIDLLTWRTLSL--ANDTL 416 (737)
T ss_pred --Cc-EEEe---ccccchhHh--hhhhhheEEecCcEEEEEEecC---ceecCC--CCCCcccccccceeeec--ccceE
Confidence 01 1111 111111100 1112344444555667766653 212211 1343321 111111222 22244
Q ss_pred EEEecCCc----EEEe-cCCCeEEEEEecCCCCCccCcceEEEEEC----CCCcEEEEEecCCeEEEEECCce--eeecC
Q psy12614 468 LAVSLNGP----LYII-DLSSLEIKYCVDPYKSNLMSDVISLVQMS----ECKQYIVCADRKSHVVIWKNGQH--HASLP 536 (708)
Q Consensus 468 ~~~~~dg~----i~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~s----~~~~~l~~~~~d~~i~iw~~~~~--~~~~~ 536 (708)
+.-...+. +++. .++ +....-.. -.| ...|..++.. ++.+.+|.-+..+.+.|=.+++. +..+.
T Consensus 417 aird~ad~kvlhlFd~istg--k~qgDgk~-L~h--k~~IveIAldqkG~tnDrkVAFiDknrdl~ItsvKrfgkee~I~ 491 (737)
T KOG1524|consen 417 AIRDNADPKVLHLFDLISTG--KRQGDGKS-LRH--KQQIVEIALDQKGLTNDRKVAFIDKNRDLFITSVKRFGKEEEIY 491 (737)
T ss_pred EeecCCCCeeEEeccCCCCC--cccCCccc-cch--hhhHHHhHhhccCCCccceEEEEecCCcEEEEeehhcCchhhhh
Confidence 43332222 3333 222 11110000 011 4455555554 35678888888888888777732 22444
Q ss_pred CCCCCceEEEEcCCCCEEEEEecCCcEEEEEcCCCCCC
Q psy12614 537 RYRKPSTAMAIHPTLSTLVTVYSDHRIVEFDLNRKAFT 574 (708)
Q Consensus 537 ~~~~~v~~l~~s~d~~~l~~~~~dg~i~vwd~~~~~~~ 574 (708)
.-...|..++|+. -.-++++-.|+++.||=+++....
T Consensus 492 KiGTmVhtLawnd-ttNiLcglqDt~fsVWy~pn~vyv 528 (737)
T KOG1524|consen 492 KIGTMVHTLAWND-TTNILCGLQDTCFSVWYYPNEVYV 528 (737)
T ss_pred hhhhhhhhhhhcc-ccceeeeeccceEEEEEcCCccee
Confidence 4556789999994 445667889999999998865443
|
|
| >KOG0302|consensus | Back alignment and domain information |
|---|
Probab=99.85 E-value=9e-20 Score=164.21 Aligned_cols=235 Identities=14% Similarity=0.227 Sum_probs=183.8
Q ss_pred cCCCCcEEEEEEcCCC--CEEEEEeCCCcEEEEeCCC----------------CCeEEEEEecCCCCCcEEEEEEe---C
Q psy12614 23 APEPKVINCIACEPKS--SRLAVSRADQSIEIWDISE----------------TPHVDRVFIGDPLSNSIECLTWF---N 81 (708)
Q Consensus 23 ~~h~~~v~~~~~s~~~--~~la~~~~dg~v~iwd~~~----------------~~~~~~~~~~h~~~~~v~~l~~~---~ 81 (708)
.+|.+.++.+.-++-+ .+.|+=++.|.|.|||+.. .+.+. ++.+|. ..=.+|+|| .
T Consensus 148 i~h~g~~NRvr~~~~~~~~~~aswse~G~V~Vw~l~~~l~~l~~~~~~~~~s~~~Pl~-t~~ghk--~EGy~LdWSp~~~ 224 (440)
T KOG0302|consen 148 IPHYGGINRVRVSRLGNEVLCASWSENGRVQVWDLAPHLNALSEPGLEVKDSEFRPLF-TFNGHK--GEGYGLDWSPIKT 224 (440)
T ss_pred cccccccceeeecccCCcceeeeecccCcEEEEEchhhhhhhcCccccccccccCceE-EecccC--ccceeeecccccc
Confidence 4677888888877755 4555667899999999863 12333 788999 888999999 6
Q ss_pred CEEEEEcCCCcEEEEECCCCeE---eEEEeecCCceEEEEEecC-CCEEEEEeCCCcEEEEEccCCcEEEEEeccccccc
Q psy12614 82 DRLFSGGLQGFVNEYDMRRLNI---KSSTAVTSGTCWCLSVHKK-KRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGR 157 (708)
Q Consensus 82 ~~l~s~~~d~~i~vwd~~~~~~---~~~~~~~~~~v~~~~~s~~-~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~ 157 (708)
..|++|.--+.|++|...+|.- ...+.+|...|-.++|||. ...||+|+-||+|+|||++.+........+.|.+.
T Consensus 225 g~LlsGDc~~~I~lw~~~~g~W~vd~~Pf~gH~~SVEDLqWSptE~~vfaScS~DgsIrIWDiRs~~~~~~~~~kAh~sD 304 (440)
T KOG0302|consen 225 GRLLSGDCVKGIHLWEPSTGSWKVDQRPFTGHTKSVEDLQWSPTEDGVFASCSCDGSIRIWDIRSGPKKAAVSTKAHNSD 304 (440)
T ss_pred cccccCccccceEeeeeccCceeecCccccccccchhhhccCCccCceEEeeecCceEEEEEecCCCccceeEeeccCCc
Confidence 7799999999999999988763 2446689999999999995 45889999999999999998844333455889999
Q ss_pred EEEEEECCCCCEEEEecCC-eEEEEEcCC---CceEEEEEecccCCCCCceeEEEEEEccCC--EEEEEcCCCcEEEEeC
Q psy12614 158 ILCTAWHSSGDYLVTGCAA-AVRVWDIHK---GHAIHKMSLDKSSKFSKNTAVWCVAFCADF--TIITGDSGGFVRFWDG 231 (708)
Q Consensus 158 v~~~~~s~d~~~l~~~~~d-~i~iwd~~~---~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~l~~~~~dg~i~~wd~ 231 (708)
|+.+.|+.+-.+||+|+.| +++|||+++ ++++..++.+ ..+|+++.|+|.. .+++++.|.+|.+||+
T Consensus 305 VNVISWnr~~~lLasG~DdGt~~iwDLR~~~~~~pVA~fk~H-------k~pItsieW~p~e~s~iaasg~D~QitiWDl 377 (440)
T KOG0302|consen 305 VNVISWNRREPLLASGGDDGTLSIWDLRQFKSGQPVATFKYH-------KAPITSIEWHPHEDSVIAASGEDNQITIWDL 377 (440)
T ss_pred eeeEEccCCcceeeecCCCceEEEEEhhhccCCCcceeEEec-------cCCeeEEEeccccCceEEeccCCCcEEEEEe
Confidence 9999999998999999999 999999975 5566777744 8999999999965 4999999999999998
Q ss_pred CCCee--------E--------EEeecc--ccCeEEEEEeCCC-CEEEEEecCCe
Q psy12614 232 KTGVQ--------W--------SDVKTH--KKDILALTVSEDE-NYLYCAGVDPT 267 (708)
Q Consensus 232 ~~~~~--------~--------~~~~~~--~~~i~~~~~s~~~-~~l~~~~~dg~ 267 (708)
..-.- . +.+.-| ...+..+.|+++- -+|++.+.||.
T Consensus 378 svE~D~ee~~~~a~~~L~dlPpQLLFVHqGQke~KevhWH~QiPG~lvsTa~dGf 432 (440)
T KOG0302|consen 378 SVEADEEEIDQEAAEGLQDLPPQLLFVHQGQKEVKEVHWHRQIPGLLVSTAIDGF 432 (440)
T ss_pred eccCChhhhccccccchhcCCceeEEEecchhHhhhheeccCCCCeEEEecccce
Confidence 53210 0 111223 4567788888764 46777777763
|
|
| >KOG4328|consensus | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.4e-19 Score=167.25 Aligned_cols=298 Identities=16% Similarity=0.226 Sum_probs=218.2
Q ss_pred EECCCCeEeEEEeecCCceEEEEEecCC--CEEEEEeCCCcEEEEEccCCcE--EEEEecccccccEEEEEECCCC-CEE
Q psy12614 96 YDMRRLNIKSSTAVTSGTCWCLSVHKKK--RLLAAGTEQGHINLFQISDEGL--LYEKLLDRQQGRILCTAWHSSG-DYL 170 (708)
Q Consensus 96 wd~~~~~~~~~~~~~~~~v~~~~~s~~~--~~la~~~~d~~i~iwd~~~~~~--~~~~~~~~~~~~v~~~~~s~d~-~~l 170 (708)
.|+..-.....++.+.++|++++|+|.. +++|+|...|+|-+||+.+.+. .....+..|.++|.++.|+|.+ ..+
T Consensus 171 l~l~~~~~~~v~kv~~~Rit~l~fHPt~~~~lva~GdK~G~VG~Wn~~~~~~d~d~v~~f~~hs~~Vs~l~F~P~n~s~i 250 (498)
T KOG4328|consen 171 LDLDDYRILNVAKVTDRRITSLAFHPTENRKLVAVGDKGGQVGLWNFGTQEKDKDGVYLFTPHSGPVSGLKFSPANTSQI 250 (498)
T ss_pred cccccceecceeEecccceEEEEecccCcceEEEEccCCCcEEEEecCCCCCccCceEEeccCCccccceEecCCChhhe
Confidence 4555556667778899999999999965 4788899999999999953221 1125678899999999999965 678
Q ss_pred EEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCee-EEEeeccccCe
Q psy12614 171 VTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQ-WSDVKTHKKDI 247 (708)
Q Consensus 171 ~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~-~~~~~~~~~~i 247 (708)
++.+.| +|++-|++++.....+... .....+..+.|+.+.. ++.++.-|...+||++++.. ...+.-|...|
T Consensus 251 ~ssSyDGtiR~~D~~~~i~e~v~s~~-----~d~~~fs~~d~~~e~~~vl~~~~~G~f~~iD~R~~~s~~~~~~lh~kKI 325 (498)
T KOG4328|consen 251 YSSSYDGTIRLQDFEGNISEEVLSLD-----TDNIWFSSLDFSAESRSVLFGDNVGNFNVIDLRTDGSEYENLRLHKKKI 325 (498)
T ss_pred eeeccCceeeeeeecchhhHHHhhcC-----ccceeeeeccccCCCccEEEeecccceEEEEeecCCccchhhhhhhccc
Confidence 888888 9999999876543333321 1256778888888774 77888888999999998654 66677788999
Q ss_pred EEEEEeCCC-CEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEEEcCCCeE
Q psy12614 248 LALTVSEDE-NYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSGGLDSYL 324 (708)
Q Consensus 248 ~~~~~s~~~-~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~~~d~~i 324 (708)
..++++|-. .+|++++.|++.+|||++. +... .. +......|...|.+..|+ +..|++.+.|..|
T Consensus 326 ~sv~~NP~~p~~laT~s~D~T~kIWD~R~-----l~~K-----~s--p~lst~~HrrsV~sAyFSPs~gtl~TT~~D~~I 393 (498)
T KOG4328|consen 326 TSVALNPVCPWFLATASLDQTAKIWDLRQ-----LRGK-----AS--PFLSTLPHRRSVNSAYFSPSGGTLLTTCQDNEI 393 (498)
T ss_pred ceeecCCCCchheeecccCcceeeeehhh-----hcCC-----CC--cceecccccceeeeeEEcCCCCceEeeccCCce
Confidence 999999976 5788999999999999987 1111 11 245556899999999999 6669999999999
Q ss_pred EEEeCC----CCc-eeecCccCC------CCceEEEEcCCcEEEEE-cCCeEEEEEecCCCCCCCCCCCCCCcccCCCCc
Q psy12614 325 SLSYYP----PKT-LVKYPCTLA------QSTPVSLAKDIQHVLLQ-YTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFP 392 (708)
Q Consensus 325 ~iw~~~----~~~-~~~~~~~~~------~~~~~~~s~~~~~l~~~-~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (708)
+|||.. ... +..+. +.. ..-...|.|+..+++++ ....|.++|-..++
T Consensus 394 Rv~dss~~sa~~~p~~~I~-Hn~~t~RwlT~fKA~W~P~~~li~vg~~~r~IDv~~~~~~q------------------- 453 (498)
T KOG4328|consen 394 RVFDSSCISAKDEPLGTIP-HNNRTGRWLTPFKAAWDPDYNLIVVGRYPRPIDVFDGNGGQ------------------- 453 (498)
T ss_pred EEeecccccccCCccceee-ccCcccccccchhheeCCCccEEEEeccCcceeEEcCCCCE-------------------
Confidence 999984 111 11222 111 11247889999999986 66779999988755
Q ss_pred eEEEEEEecCCCceEE-EEeCCCCcEEEEEc--CCceEEEEE
Q psy12614 393 RLIVKMSAVNNATIRC-SVVSNDGKYVAYST--ESCVRLHSL 431 (708)
Q Consensus 393 ~~~~~~~~~~~~~i~~-~~~s~~g~~l~~~~--d~~i~i~~~ 431 (708)
.+.++.......|.+ .+|+|-+..+++|. .|.|+||.-
T Consensus 454 -~v~el~~P~~~tI~~vn~~HP~~~~~~aG~~s~Gki~vft~ 494 (498)
T KOG4328|consen 454 -MVCELHDPESSTIPSVNEFHPMRDTLAAGGNSSGKIYVFTN 494 (498)
T ss_pred -EeeeccCccccccccceeecccccceeccCCccceEEEEec
Confidence 344544444445555 47999888566643 777777753
|
|
| >COG2319 FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.1e-16 Score=165.54 Aligned_cols=364 Identities=19% Similarity=0.312 Sum_probs=268.2
Q ss_pred EEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECCCCe-EeEEEeecCC-ceEEEEE-ecCCC-EEEEEeC-CCcEE
Q psy12614 64 VFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMRRLN-IKSSTAVTSG-TCWCLSV-HKKKR-LLAAGTE-QGHIN 136 (708)
Q Consensus 64 ~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~~-~~~~~~~~~~-~v~~~~~-s~~~~-~la~~~~-d~~i~ 136 (708)
.+.+|. ..+..+.+. +..++.++.|+.+.+|+...+. ....+..+.. .+..+.+ ++++. .++..+. |+.+.
T Consensus 60 ~~~~~~--~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 137 (466)
T COG2319 60 LLRGHE--DSITSIAFSPDGELLLSGSSDGTIKLWDLDNGEKLIKSLEGLHDSSVSKLALSSPDGNSILLASSSLDGTVK 137 (466)
T ss_pred eeeecc--ceEEEEEECCCCcEEEEecCCCcEEEEEcCCCceeEEEEeccCCCceeeEEEECCCcceEEeccCCCCccEE
Confidence 566777 999999999 8888888899999999999987 6777776443 7777877 88887 5555444 89999
Q ss_pred EEEccC-CcEEEEEecccccccEEEEEECCCCCEEEEecC-C-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEcc
Q psy12614 137 LFQISD-EGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCA-A-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCA 213 (708)
Q Consensus 137 iwd~~~-~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~-d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 213 (708)
+|+... .... ..+..|...|..++|+|++..+++++. + .+++|++..+..+..+.. |...+.+++|+|
T Consensus 138 ~~~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~v~~~~~~~ 208 (466)
T COG2319 138 LWDLSTPGKLI--RTLEGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRTGKPLSTLAG-------HTDPVSSLAFSP 208 (466)
T ss_pred EEEecCCCeEE--EEEecCcccEEEEEECCCCCEEEecCCCCCceEEEEcCCCceEEeecc-------CCCceEEEEEcC
Confidence 999997 4544 678889999999999999998888885 8 999999998777777764 388999999999
Q ss_pred CCE-EEEE-cCCCcEEEEeCCCCeeEE-EeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCc
Q psy12614 214 DFT-IITG-DSGGFVRFWDGKTGVQWS-DVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSS 290 (708)
Q Consensus 214 ~~~-l~~~-~~dg~i~~wd~~~~~~~~-~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~ 290 (708)
++. ++++ +.|+.|.+||...+..+. .+.+|.... ...|+|++..+++++.|+.+++|+... .. .
T Consensus 209 ~~~~~~~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~--------~~----~ 275 (466)
T COG2319 209 DGGLLIASGSSDGTIRLWDLSTGKLLRSTLSGHSDSV-VSSFSPDGSLLASGSSDGTIRLWDLRS--------SS----S 275 (466)
T ss_pred CcceEEEEecCCCcEEEEECCCCcEEeeecCCCCcce-eEeECCCCCEEEEecCCCcEEEeeecC--------CC----c
Confidence 995 5544 899999999998888877 688888775 448999998999999999999999987 32 1
Q ss_pred ceEEeEEEeccccceEEEEEe--CCEEEEEcCCCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEEEcCCeEEEEE
Q psy12614 291 VWVRSVNRVIHEGDVKSLALH--GNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWS 368 (708)
Q Consensus 291 ~~~~~~~~~~~~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~ 368 (708)
.......|...+.++.+. +..+++++.|+.+.+|+..........
T Consensus 276 ---~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~------------------------------ 322 (466)
T COG2319 276 ---LLRTLSGHSSSVLSVAFSPDGKLLASGSSDGTVRLWDLETGKLLSSL------------------------------ 322 (466)
T ss_pred ---EEEEEecCCccEEEEEECCCCCEEEEeeCCCcEEEEEcCCCceEEEe------------------------------
Confidence 122226778888888887 577777888877888866543211111
Q ss_pred ecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEEE--cCCceEEEEEEecCCcceeEEeecC
Q psy12614 369 LGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYS--TESCVRLHSLDLDGDKPQISRIKNL 446 (708)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~--~d~~i~i~~~~~~~~~~~~~~~~~~ 446 (708)
. ...+...+..+.+.+++..++.+ .|+.+.+|++.... .... .
T Consensus 323 ----------------------------~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~---~~~~---~ 367 (466)
T COG2319 323 ----------------------------T-LKGHEGPVSSLSFSPDGSLLVSGGSDDGTIRLWDLRTGK---PLKT---L 367 (466)
T ss_pred ----------------------------e-ecccCCceEEEEECCCCCEEEEeecCCCcEEeeecCCCc---eeEE---e
Confidence 0 12344467777774343555554 48889999988633 1211 1
Q ss_pred CcccccceeEEEEEecCCCeEEE-EecCCc--EEEecCCCeEEEEEecCCCCCccCcceEEEEECCCCcEEEEEecCCeE
Q psy12614 447 PAPLFKSIFTHVLISADSTLLLA-VSLNGP--LYIIDLSSLEIKYCVDPYKSNLMSDVISLVQMSECKQYIVCADRKSHV 523 (708)
Q Consensus 447 ~~~~~~~~i~~~~~s~d~~~l~~-~~~dg~--i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i 523 (708)
... ..+..+.+++ ...... +..++. +|+.... ......... ...+....+++++..++.++.++.+
T Consensus 368 ~~~---~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (466)
T COG2319 368 EGH---SNVLSVSFSP-DGRVVSSGSTDGTVRLWDLSTG--SLLRNLDGH-----TSRVTSLDFSPDGKSLASGSSDNTI 436 (466)
T ss_pred cCC---ceEEEEEECC-CCCEEEEecCCCceEEEecccC--eeeeeccCC-----CCcEEEEEECCCCcEEEEecCCCcE
Confidence 111 1155688888 534443 455555 7777665 333333221 1578889999999999998889999
Q ss_pred EEEECCc
Q psy12614 524 VIWKNGQ 530 (708)
Q Consensus 524 ~iw~~~~ 530 (708)
++|+...
T Consensus 437 ~~~~~~~ 443 (466)
T COG2319 437 RLWDLKT 443 (466)
T ss_pred EEEeccC
Confidence 9999887
|
|
| >KOG1188|consensus | Back alignment and domain information |
|---|
Probab=99.85 E-value=6.5e-20 Score=163.19 Aligned_cols=271 Identities=19% Similarity=0.304 Sum_probs=200.2
Q ss_pred CEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe----CCEEEEEcCCCcEEEEECCCCeEeE--EEeecC-
Q psy12614 39 SRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF----NDRLFSGGLQGFVNEYDMRRLNIKS--STAVTS- 111 (708)
Q Consensus 39 ~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~----~~~l~s~~~d~~i~vwd~~~~~~~~--~~~~~~- 111 (708)
..+|++..+|.|+|||..++..+. .+.++. ..++.+.|. .+.+.+++.||+|++||+....... ....+.
T Consensus 41 ~~vav~lSngsv~lyd~~tg~~l~-~fk~~~--~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~a~~~~~~~~~ 117 (376)
T KOG1188|consen 41 TAVAVSLSNGSVRLYDKGTGQLLE-EFKGPP--ATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAESARISWTQQSG 117 (376)
T ss_pred eeEEEEecCCeEEEEeccchhhhh-eecCCC--CcccceEEecCCCCCeeEEeccCCeEEEEEeecchhhhheeccCCCC
Confidence 568999999999999999998887 999999 999999998 6789999999999999998865443 334454
Q ss_pred CceEEEEEecCCCEEEEEeC----CCcEEEEEccCCcEEEEEecccccccEEEEEECCCC-CEEEEecCC-eEEEEEcCC
Q psy12614 112 GTCWCLSVHKKKRLLAAGTE----QGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSG-DYLVTGCAA-AVRVWDIHK 185 (708)
Q Consensus 112 ~~v~~~~~s~~~~~la~~~~----d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~-~~l~~~~~d-~i~iwd~~~ 185 (708)
.+..+++.+..++.+++|+. +-.|.+||++..+.....-...|...|+++.|+|.. +.|++|+.| -|.++|++.
T Consensus 118 ~~f~~ld~nck~~ii~~GtE~~~s~A~v~lwDvR~~qq~l~~~~eSH~DDVT~lrFHP~~pnlLlSGSvDGLvnlfD~~~ 197 (376)
T KOG1188|consen 118 TPFICLDLNCKKNIIACGTELTRSDASVVLWDVRSEQQLLRQLNESHNDDVTQLRFHPSDPNLLLSGSVDGLVNLFDTKK 197 (376)
T ss_pred CcceEeeccCcCCeEEeccccccCceEEEEEEeccccchhhhhhhhccCcceeEEecCCCCCeEEeecccceEEeeecCC
Confidence 46778888778888888864 677999999988774445677899999999999965 788999999 999999875
Q ss_pred Cce----EEEEEecccCCCCCceeEEEEEEccCC--EEEEEcCCCcEEEEeCCCCeeEEEeecc------------ccCe
Q psy12614 186 GHA----IHKMSLDKSSKFSKNTAVWCVAFCADF--TIITGDSGGFVRFWDGKTGVQWSDVKTH------------KKDI 247 (708)
Q Consensus 186 ~~~----~~~~~~~~~~~~~~~~~v~~~~~~~~~--~l~~~~~dg~i~~wd~~~~~~~~~~~~~------------~~~i 247 (708)
... +..+ .+...|.++.|..++ ++.+.+..+...+|+++.+.....+... -..+
T Consensus 198 d~EeDaL~~vi--------N~~sSI~~igw~~~~ykrI~clTH~Etf~~~ele~~~~~~~~~~~~~~~~d~r~~~~~dY~ 269 (376)
T KOG1188|consen 198 DNEEDALLHVI--------NHGSSIHLIGWLSKKYKRIMCLTHMETFAIYELEDGSEETWLENPDVSADDLRKEDNCDYV 269 (376)
T ss_pred CcchhhHHHhh--------cccceeeeeeeecCCcceEEEEEccCceeEEEccCCChhhcccCccchhhhHHhhhhhhhe
Confidence 422 2222 336779999999999 7999999999999999988755444211 1112
Q ss_pred EEEEEeCCCCEEEEEec-CCeEEEEEccCCcccccCCCCCCCCcceEEeEEEec-cccceEEEEEe--CCEEEEEcCCCe
Q psy12614 248 LALTVSEDENYLYCAGV-DPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVI-HEGDVKSLALH--GNRLYSGGLDSY 323 (708)
Q Consensus 248 ~~~~~s~~~~~l~~~~~-dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~v~~l~~~--~~~l~s~~~d~~ 323 (708)
.......+....+.++. -+...++-+... .++. .......+.+ |..-|+++.|. +..+.|||.||.
T Consensus 270 I~~~~~~~~~~~~l~g~~~n~~~~~~~~~~-----~s~~-----~~~~~a~l~g~~~eiVR~i~~~~~~~~l~TGGEDG~ 339 (376)
T KOG1188|consen 270 INEHSPGDKDTCALAGTDSNKGTIFPLVDT-----SSGS-----LLTEPAILQGGHEEIVRDILFDVKNDVLYTGGEDGL 339 (376)
T ss_pred eecccCCCcceEEEeccccCceeEEEeeec-----cccc-----ccCccccccCCcHHHHHHHhhhcccceeeccCCCce
Confidence 22222234445555544 455555544420 0011 0012334444 66778899888 899999999999
Q ss_pred EEEEeCC
Q psy12614 324 LSLSYYP 330 (708)
Q Consensus 324 i~iw~~~ 330 (708)
+.+|..+
T Consensus 340 l~~Wk~~ 346 (376)
T KOG1188|consen 340 LQAWKVE 346 (376)
T ss_pred EEEEecC
Confidence 9999863
|
|
| >KOG0302|consensus | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.7e-19 Score=161.20 Aligned_cols=205 Identities=17% Similarity=0.258 Sum_probs=163.4
Q ss_pred ecCCceEEEEEecCC--CEEEEEeCCCcEEEEEccCC--------------cEEEEEecccccccEEEEEECCCCC-EEE
Q psy12614 109 VTSGTCWCLSVHKKK--RLLAAGTEQGHINLFQISDE--------------GLLYEKLLDRQQGRILCTAWHSSGD-YLV 171 (708)
Q Consensus 109 ~~~~~v~~~~~s~~~--~~la~~~~d~~i~iwd~~~~--------------~~~~~~~~~~~~~~v~~~~~s~d~~-~l~ 171 (708)
.|.+.++.+.-++-+ .+.|+-+..|.|.||++... +.....++.+|.+.-..++|||-.. .|+
T Consensus 149 ~h~g~~NRvr~~~~~~~~~~aswse~G~V~Vw~l~~~l~~l~~~~~~~~~s~~~Pl~t~~ghk~EGy~LdWSp~~~g~Ll 228 (440)
T KOG0302|consen 149 PHYGGINRVRVSRLGNEVLCASWSENGRVQVWDLAPHLNALSEPGLEVKDSEFRPLFTFNGHKGEGYGLDWSPIKTGRLL 228 (440)
T ss_pred ccccccceeeecccCCcceeeeecccCcEEEEEchhhhhhhcCccccccccccCceEEecccCccceeeecccccccccc
Confidence 677788888877755 35566678999999998531 1112256778999899999999332 366
Q ss_pred EecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCC--EEEEEcCCCcEEEEeCCCC---eeEEEeecccc
Q psy12614 172 TGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADF--TIITGDSGGFVRFWDGKTG---VQWSDVKTHKK 245 (708)
Q Consensus 172 ~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~l~~~~~dg~i~~wd~~~~---~~~~~~~~~~~ 245 (708)
+|.-- .|++|...+|.-...-. +.. +|...|-.++|+|.. -|++|+.||+|+|||++.+ .++.+ +.|.+
T Consensus 229 sGDc~~~I~lw~~~~g~W~vd~~-Pf~---gH~~SVEDLqWSptE~~vfaScS~DgsIrIWDiRs~~~~~~~~~-kAh~s 303 (440)
T KOG0302|consen 229 SGDCVKGIHLWEPSTGSWKVDQR-PFT---GHTKSVEDLQWSPTEDGVFASCSCDGSIRIWDIRSGPKKAAVST-KAHNS 303 (440)
T ss_pred cCccccceEeeeeccCceeecCc-ccc---ccccchhhhccCCccCceEEeeecCceEEEEEecCCCccceeEe-eccCC
Confidence 66555 99999998865432221 111 458999999999965 4999999999999999988 33333 78999
Q ss_pred CeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe---CCEEEEEcCCC
Q psy12614 246 DILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH---GNRLYSGGLDS 322 (708)
Q Consensus 246 ~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~---~~~l~s~~~d~ 322 (708)
.|..+.|+.+-.+|++|+.||+++|||++. .+.++ +...+..|..+|+++.|+ ...++++|.|.
T Consensus 304 DVNVISWnr~~~lLasG~DdGt~~iwDLR~-----~~~~~--------pVA~fk~Hk~pItsieW~p~e~s~iaasg~D~ 370 (440)
T KOG0302|consen 304 DVNVISWNRREPLLASGGDDGTLSIWDLRQ-----FKSGQ--------PVATFKYHKAPITSIEWHPHEDSVIAASGEDN 370 (440)
T ss_pred ceeeEEccCCcceeeecCCCceEEEEEhhh-----ccCCC--------cceeEEeccCCeeEEEeccccCceEEeccCCC
Confidence 999999999989999999999999999998 55555 778999999999999999 78999999999
Q ss_pred eEEEEeCCC
Q psy12614 323 YLSLSYYPP 331 (708)
Q Consensus 323 ~i~iw~~~~ 331 (708)
+|.+||+.-
T Consensus 371 QitiWDlsv 379 (440)
T KOG0302|consen 371 QITIWDLSV 379 (440)
T ss_pred cEEEEEeec
Confidence 999999854
|
|
| >KOG4497|consensus | Back alignment and domain information |
|---|
Probab=99.84 E-value=1e-19 Score=160.88 Aligned_cols=399 Identities=14% Similarity=0.146 Sum_probs=247.7
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe---CCEEEEEcCCCcEEEEECCCCeEeEEE
Q psy12614 31 CIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF---NDRLFSGGLQGFVNEYDMRRLNIKSST 107 (708)
Q Consensus 31 ~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~---~~~l~s~~~d~~i~vwd~~~~~~~~~~ 107 (708)
-.+|||+|+++|+++.- .+.|-|..+-+..+ .+.. - ..|.-+.|. -..|.....++.|.+|++...+-..++
T Consensus 13 ~c~fSp~g~yiAs~~~y-rlviRd~~tlq~~q-lf~c-l--dki~yieW~ads~~ilC~~yk~~~vqvwsl~Qpew~ckI 87 (447)
T KOG4497|consen 13 FCSFSPCGNYIASLSRY-RLVIRDSETLQLHQ-LFLC-L--DKIVYIEWKADSCHILCVAYKDPKVQVWSLVQPEWYCKI 87 (447)
T ss_pred ceeECCCCCeeeeeeee-EEEEeccchhhHHH-HHHH-H--HHhhheeeeccceeeeeeeeccceEEEEEeecceeEEEe
Confidence 36899999999999755 89999988755432 2222 1 567888888 334556678999999999999888888
Q ss_pred eecCCceEEEEEecCCCEEEE-EeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-e---EEEEE
Q psy12614 108 AVTSGTCWCLSVHKKKRLLAA-GTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-A---VRVWD 182 (708)
Q Consensus 108 ~~~~~~v~~~~~s~~~~~la~-~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~---i~iwd 182 (708)
..-...+.+++|||||+.+.. ..-+-.|.+|.+.+.+... +.-.+..+..++|+|||++.+.+++. . +.+..
T Consensus 88 deg~agls~~~WSPdgrhiL~tseF~lriTVWSL~t~~~~~---~~~pK~~~kg~~f~~dg~f~ai~sRrDCkdyv~i~~ 164 (447)
T KOG4497|consen 88 DEGQAGLSSISWSPDGRHILLTSEFDLRITVWSLNTQKGYL---LPHPKTNVKGYAFHPDGQFCAILSRRDCKDYVQISS 164 (447)
T ss_pred ccCCCcceeeeECCCcceEeeeecceeEEEEEEeccceeEE---ecccccCceeEEECCCCceeeeeecccHHHHHHHHh
Confidence 888899999999999976554 5558899999999887742 33334556899999999999988764 2 33332
Q ss_pred cCCCceEEEEEecccCCCCCceeEEEEEEccCCEEEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEE
Q psy12614 183 IHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCA 262 (708)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~ 262 (708)
-..-..++.+... .-..+.+.|+|||. .+.+||.--...+..+. ..-.+..++|+|.+++|++|
T Consensus 165 c~~W~ll~~f~~d-------T~DltgieWsPdg~--------~laVwd~~Leykv~aYe-~~lG~k~v~wsP~~qflavG 228 (447)
T KOG4497|consen 165 CKAWILLKEFKLD-------TIDLTGIEWSPDGN--------WLAVWDNVLEYKVYAYE-RGLGLKFVEWSPCNQFLAVG 228 (447)
T ss_pred hHHHHHHHhcCCC-------cccccCceECCCCc--------EEEEecchhhheeeeee-eccceeEEEeccccceEEee
Confidence 2233344445443 55677899999984 34456643222222222 23578889999999999999
Q ss_pred ecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEeCCEEEEEcCCCeEEEEeCCCCceeecCccCC
Q psy12614 263 GVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALHGNRLYSGGLDSYLSLSYYPPKTLVKYPCTLA 342 (708)
Q Consensus 263 ~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~ 342 (708)
+.|+.+++.+--+ |.....+ .|-..+. |.++.+..-+..
T Consensus 229 syD~~lrvlnh~t----------------Wk~f~ef-lhl~s~~--------------dp~~~~~~ke~~---------- 267 (447)
T KOG4497|consen 229 SYDQMLRVLNHFT----------------WKPFGEF-LHLCSYH--------------DPTLHLLEKETF---------- 267 (447)
T ss_pred ccchhhhhhceee----------------eeehhhh-ccchhcc--------------Cchhhhhhhhhc----------
Confidence 9999998876554 2222111 1111111 111000000000
Q ss_pred CCceEEEEcCCcEEEEEcCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEEEc
Q psy12614 343 QSTPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYST 422 (708)
Q Consensus 343 ~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~ 422 (708)
... .-...++.|.|..--.-...
T Consensus 268 ---------------------------------------------------~~~------ql~~~cLsf~p~~~~a~~~~ 290 (447)
T KOG4497|consen 268 ---------------------------------------------------SIV------QLLHHCLSFTPTDLEAHIWE 290 (447)
T ss_pred ---------------------------------------------------chh------hhcccccccCCCccccCccc
Confidence 000 00112333433221000000
Q ss_pred CCceEEEEEEecCCcceeEEe---ecCCcccccceeEEEEEecCCCeEEEEecCCc--EEEecCCCeEEEEEecCCCCCc
Q psy12614 423 ESCVRLHSLDLDGDKPQISRI---KNLPAPLFKSIFTHVLISADSTLLLAVSLNGP--LYIIDLSSLEIKYCVDPYKSNL 497 (708)
Q Consensus 423 d~~i~i~~~~~~~~~~~~~~~---~~~~~~~~~~~i~~~~~s~d~~~l~~~~~dg~--i~~~~~~~~~~~~~~~~~~~~~ 497 (708)
.. =.+|.... -...+.++ ...++. ...+.-++||+|..++++-.+.-- +|.++....+....+..
T Consensus 291 ~s-e~~YE~~~--~pv~~~~lkp~tD~pnP--k~g~g~lafs~Ds~y~aTrnd~~PnalW~Wdlq~l~l~avLiQ----- 360 (447)
T KOG4497|consen 291 ES-ETIYEQQM--TPVKVHKLKPPTDFPNP--KCGAGKLAFSCDSTYAATRNDKYPNALWLWDLQNLKLHAVLIQ----- 360 (447)
T ss_pred cc-hhhhhhhh--cceeeecccCCCCCCCc--ccccceeeecCCceEEeeecCCCCceEEEEechhhhhhhhhhh-----
Confidence 00 01122111 11111111 112222 224555999999999998765544 44444332233222222
Q ss_pred cCcceEEEEECCCCcEEEEEecCCeEEEEECCceee-ecCCCCCCceEEEEcCCCCEEEEEecCCc
Q psy12614 498 MSDVISLVQMSECKQYIVCADRKSHVVIWKNGQHHA-SLPRYRKPSTAMAIHPTLSTLVTVYSDHR 562 (708)
Q Consensus 498 ~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~-~~~~~~~~v~~l~~s~d~~~l~~~~~dg~ 562 (708)
..+|....|.|....|+.+.....+++|......+ ..+...-.|..+.|..+|..|+..+.|..
T Consensus 361 -k~piraf~WdP~~prL~vctg~srLY~W~psg~~~V~vP~~GF~i~~l~W~~~g~~i~l~~kDaf 425 (447)
T KOG4497|consen 361 -KHPIRAFEWDPGRPRLVVCTGKSRLYFWAPSGPRVVGVPKKGFNIQKLQWLQPGEFIVLCGKDAF 425 (447)
T ss_pred -ccceeEEEeCCCCceEEEEcCCceEEEEcCCCceEEecCCCCceeeeEEecCCCcEEEEEcCCce
Confidence 45899999999999999988888999999985444 44555578999999999999999988864
|
|
| >KOG0307|consensus | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.5e-20 Score=193.45 Aligned_cols=241 Identities=15% Similarity=0.250 Sum_probs=193.2
Q ss_pred CcEEEEEEcCCCCE----EEEEeCCCcEEEEeCCC---CC--eEEEEEecCCCCCcEEEEEEe---CCEEEEEcCCCcEE
Q psy12614 27 KVINCIACEPKSSR----LAVSRADQSIEIWDISE---TP--HVDRVFIGDPLSNSIECLTWF---NDRLFSGGLQGFVN 94 (708)
Q Consensus 27 ~~v~~~~~s~~~~~----la~~~~dg~v~iwd~~~---~~--~~~~~~~~h~~~~~v~~l~~~---~~~l~s~~~d~~i~ 94 (708)
..-+.++|.+.|.. ||.|.+||.|.+||... +. .+......|. +.|..+.|+ ++.||+|+.||.|.
T Consensus 65 ~rF~kL~W~~~g~~~~GlIaGG~edG~I~ly~p~~~~~~~~~~~la~~~~h~--G~V~gLDfN~~q~nlLASGa~~geI~ 142 (1049)
T KOG0307|consen 65 NRFNKLAWGSYGSHSHGLIAGGLEDGNIVLYDPASIIANASEEVLATKSKHT--GPVLGLDFNPFQGNLLASGADDGEIL 142 (1049)
T ss_pred ccceeeeecccCCCccceeeccccCCceEEecchhhccCcchHHHhhhcccC--CceeeeeccccCCceeeccCCCCcEE
Confidence 45678999987765 88899999999999876 21 1223677898 999999999 77999999999999
Q ss_pred EEECCCCeEeEEEe--ecCCceEEEEEecCC-CEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCC-CEE
Q psy12614 95 EYDMRRLNIKSSTA--VTSGTCWCLSVHKKK-RLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSG-DYL 170 (708)
Q Consensus 95 vwd~~~~~~~~~~~--~~~~~v~~~~~s~~~-~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~-~~l 170 (708)
|||+..-+.-.+.. ...+.|.+++|+..- ..||+++.+|.+.|||++..+.+......+....+..++|+|++ ..|
T Consensus 143 iWDlnn~~tP~~~~~~~~~~eI~~lsWNrkvqhILAS~s~sg~~~iWDlr~~~pii~ls~~~~~~~~S~l~WhP~~aTql 222 (1049)
T KOG0307|consen 143 IWDLNKPETPFTPGSQAPPSEIKCLSWNRKVSHILASGSPSGRAVIWDLRKKKPIIKLSDTPGRMHCSVLAWHPDHATQL 222 (1049)
T ss_pred EeccCCcCCCCCCCCCCCcccceEeccchhhhHHhhccCCCCCceeccccCCCcccccccCCCccceeeeeeCCCCceee
Confidence 99998855444432 245789999999854 46788999999999999988776333333333457899999987 456
Q ss_pred EEecCC----eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCC-E-EEEEcCCCcEEEEeCCCCeeEEEeeccc
Q psy12614 171 VTGCAA----AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADF-T-IITGDSGGFVRFWDGKTGVQWSDVKTHK 244 (708)
Q Consensus 171 ~~~~~d----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~-l~~~~~dg~i~~wd~~~~~~~~~~~~~~ 244 (708)
++++.| .|.+||++.-....+... +|...|.++.|++.+ + +++++.|+.|.+|+.++++.+..+....
T Consensus 223 ~~As~dd~~PviqlWDlR~assP~k~~~------~H~~GilslsWc~~D~~lllSsgkD~~ii~wN~~tgEvl~~~p~~~ 296 (1049)
T KOG0307|consen 223 LVASGDDSAPVIQLWDLRFASSPLKILE------GHQRGILSLSWCPQDPRLLLSSGKDNRIICWNPNTGEVLGELPAQG 296 (1049)
T ss_pred eeecCCCCCceeEeecccccCCchhhhc------ccccceeeeccCCCCchhhhcccCCCCeeEecCCCceEeeecCCCC
Confidence 666554 699999886443332222 448999999999977 4 8899999999999999999999999888
Q ss_pred cCeEEEEEeCCCC-EEEEEecCCeEEEEEccC
Q psy12614 245 KDILALTVSEDEN-YLYCAGVDPTVVCFQRTR 275 (708)
Q Consensus 245 ~~i~~~~~s~~~~-~l~~~~~dg~i~iw~~~~ 275 (708)
..+..+.|+|... .+++++.||.|.||.+..
T Consensus 297 nW~fdv~w~pr~P~~~A~asfdgkI~I~sl~~ 328 (1049)
T KOG0307|consen 297 NWCFDVQWCPRNPSVMAAASFDGKISIYSLQG 328 (1049)
T ss_pred cceeeeeecCCCcchhhhheeccceeeeeeec
Confidence 9999999999875 788899999999999987
|
|
| >KOG0649|consensus | Back alignment and domain information |
|---|
Probab=99.84 E-value=6.3e-18 Score=143.20 Aligned_cols=238 Identities=13% Similarity=0.156 Sum_probs=185.9
Q ss_pred cEEEEEEcCCCCEEEEEeCCCcEEEEeCCC---------CCeEEEEEecCCCCCcEEEEEEeCCEEEEEcCCCcEEEEEC
Q psy12614 28 VINCIACEPKSSRLAVSRADQSIEIWDISE---------TPHVDRVFIGDPLSNSIECLTWFNDRLFSGGLQGFVNEYDM 98 (708)
Q Consensus 28 ~v~~~~~s~~~~~la~~~~dg~v~iwd~~~---------~~~~~~~~~~h~~~~~v~~l~~~~~~l~s~~~d~~i~vwd~ 98 (708)
.|.+-+++|.+++|++|..+|.|.+..+.+ ++......++|. ++|..++|...+|++++. |.|+-|.+
T Consensus 12 tvf~qa~sp~~~~l~agn~~G~iav~sl~sl~s~sa~~~gk~~iv~eqahd--gpiy~~~f~d~~Lls~gd-G~V~gw~W 88 (325)
T KOG0649|consen 12 TVFAQAISPSKQYLFAGNLFGDIAVLSLKSLDSGSAEPPGKLKIVPEQAHD--GPIYYLAFHDDFLLSGGD-GLVYGWEW 88 (325)
T ss_pred HHHHHhhCCcceEEEEecCCCeEEEEEehhhhccccCCCCCcceeeccccC--CCeeeeeeehhheeeccC-ceEEEeee
Confidence 466778999999999999999999998864 333333568999 999999999888888876 99999987
Q ss_pred CCCeE------eEEEe--ec-----CCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECC
Q psy12614 99 RRLNI------KSSTA--VT-----SGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHS 165 (708)
Q Consensus 99 ~~~~~------~~~~~--~~-----~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~ 165 (708)
..... +...+ .| -..|++|-..|..+.+++++.|+.++-||+++|+.. +.+++|.+.|.++.--.
T Consensus 89 ~E~~es~~~K~lwe~~~P~~~~~~evPeINam~ldP~enSi~~AgGD~~~y~~dlE~G~i~--r~~rGHtDYvH~vv~R~ 166 (325)
T KOG0649|consen 89 NEEEESLATKRLWEVKIPMQVDAVEVPEINAMWLDPSENSILFAGGDGVIYQVDLEDGRIQ--REYRGHTDYVHSVVGRN 166 (325)
T ss_pred hhhhhhccchhhhhhcCccccCcccCCccceeEeccCCCcEEEecCCeEEEEEEecCCEEE--EEEcCCcceeeeeeecc
Confidence 65321 11111 11 246899999998888888889999999999999998 89999999999999856
Q ss_pred CCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCC---CCceeEEEEEEccCCEEEEEcCCCcEEEEeCCCCeeEEEee
Q psy12614 166 SGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKF---SKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVK 241 (708)
Q Consensus 166 d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~ 241 (708)
....+++|+.| ++++||.++++.+..+........ .-...|-+++-+.| .+.++....+.+|.+++.++...++
T Consensus 167 ~~~qilsG~EDGtvRvWd~kt~k~v~~ie~yk~~~~lRp~~g~wigala~~ed--WlvCGgGp~lslwhLrsse~t~vfp 244 (325)
T KOG0649|consen 167 ANGQILSGAEDGTVRVWDTKTQKHVSMIEPYKNPNLLRPDWGKWIGALAVNED--WLVCGGGPKLSLWHLRSSESTCVFP 244 (325)
T ss_pred cCcceeecCCCccEEEEeccccceeEEeccccChhhcCcccCceeEEEeccCc--eEEecCCCceeEEeccCCCceEEEe
Confidence 66679999999 999999999999888765421110 11344556655443 5666667789999999998888876
Q ss_pred ccccCeEEEEEeCCCCEEEEEecCCeEEEEEccC
Q psy12614 242 THKKDILALTVSEDENYLYCAGVDPTVVCFQRTR 275 (708)
Q Consensus 242 ~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~ 275 (708)
-.+.+..+.|..| .+++++..+.+.-|.+..
T Consensus 245 -ipa~v~~v~F~~d--~vl~~G~g~~v~~~~l~G 275 (325)
T KOG0649|consen 245 -IPARVHLVDFVDD--CVLIGGEGNHVQSYTLNG 275 (325)
T ss_pred -cccceeEeeeecc--eEEEeccccceeeeeecc
Confidence 4577788888655 677888888999999876
|
|
| >KOG0303|consensus | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.6e-19 Score=162.21 Aligned_cols=226 Identities=12% Similarity=0.204 Sum_probs=174.8
Q ss_pred eeccCCCCcEEEEEEcCC-CCEEEEEeCCCcEEEEeCCCCCe------EEEEEecCCCCCcEEEEEEe---CCEEEEEcC
Q psy12614 20 KFYAPEPKVINCIACEPK-SSRLAVSRADQSIEIWDISETPH------VDRVFIGDPLSNSIECLTWF---NDRLFSGGL 89 (708)
Q Consensus 20 ~~~~~h~~~v~~~~~s~~-~~~la~~~~dg~v~iwd~~~~~~------~~~~~~~h~~~~~v~~l~~~---~~~l~s~~~ 89 (708)
-++.||+++|..++|+|. ...||+|++|.+|.||.+..+.. ....|.||. ..|--++|+ .+.|++++.
T Consensus 75 P~v~GHt~~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH~--rrVg~V~wHPtA~NVLlsag~ 152 (472)
T KOG0303|consen 75 PLVCGHTAPVLDIDWCPFNDCVIASGSEDTKVMVWQIPENGLTRDLTEPVVELYGHQ--RRVGLVQWHPTAPNVLLSAGS 152 (472)
T ss_pred CCccCccccccccccCccCCceeecCCCCceEEEEECCCcccccCcccceEEEeecc--eeEEEEeecccchhhHhhccC
Confidence 358899999999999994 46799999999999999976432 234899999 999999999 899999999
Q ss_pred CCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccc-cEEEEEECCCCC
Q psy12614 90 QGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQG-RILCTAWHSSGD 168 (708)
Q Consensus 90 d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~-~v~~~~~s~d~~ 168 (708)
|.+|.+||+.+|+.+.++. |...|+++.|+.||.+|++.+.|..|+|||..+++++. .-.+|.+ .-..+.|-.+|.
T Consensus 153 Dn~v~iWnv~tgeali~l~-hpd~i~S~sfn~dGs~l~TtckDKkvRv~dpr~~~~v~--e~~~heG~k~~Raifl~~g~ 229 (472)
T KOG0303|consen 153 DNTVSIWNVGTGEALITLD-HPDMVYSMSFNRDGSLLCTTCKDKKVRVIDPRRGTVVS--EGVAHEGAKPARAIFLASGK 229 (472)
T ss_pred CceEEEEeccCCceeeecC-CCCeEEEEEeccCCceeeeecccceeEEEcCCCCcEee--ecccccCCCcceeEEeccCc
Confidence 9999999999999998888 99999999999999999999999999999999999984 3356654 445667888888
Q ss_pred EEEEecC---C-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE--EEEEcCCCcEEEEeCCCCee----EE
Q psy12614 169 YLVTGCA---A-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT--IITGDSGGFVRFWDGKTGVQ----WS 238 (708)
Q Consensus 169 ~l~~~~~---d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--l~~~~~dg~i~~wd~~~~~~----~~ 238 (708)
.+-+|-. + .+.+||..+.+....+..- .....|.---|.+|.. .++|-.|+.|+.|.+....+ +.
T Consensus 230 i~tTGfsr~seRq~aLwdp~nl~eP~~~~el-----DtSnGvl~PFyD~dt~ivYl~GKGD~~IRYyEit~d~P~~hyln 304 (472)
T KOG0303|consen 230 IFTTGFSRMSERQIALWDPNNLEEPIALQEL-----DTSNGVLLPFYDPDTSIVYLCGKGDSSIRYFEITNEPPFVHYLN 304 (472)
T ss_pred eeeeccccccccceeccCcccccCcceeEEe-----ccCCceEEeeecCCCCEEEEEecCCcceEEEEecCCCceeEEec
Confidence 5544432 3 7999998765443222221 1145565566777775 66888899999999876553 22
Q ss_pred EeeccccCeEEEEEeCCC
Q psy12614 239 DVKTHKKDILALTVSEDE 256 (708)
Q Consensus 239 ~~~~~~~~i~~~~~s~~~ 256 (708)
++. ...+=..+.|.|..
T Consensus 305 ~f~-S~epQRG~g~mPKR 321 (472)
T KOG0303|consen 305 TFS-SKEPQRGMGFMPKR 321 (472)
T ss_pred ccc-cCCccccccccccc
Confidence 232 23344566666653
|
|
| >KOG1009|consensus | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.8e-18 Score=156.41 Aligned_cols=289 Identities=18% Similarity=0.265 Sum_probs=211.2
Q ss_pred CCCcEEEEEEcCCCC-EEEEEeCCCcEEEEeCCCCC------e--EEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCcE
Q psy12614 25 EPKVINCIACEPKSS-RLAVSRADQSIEIWDISETP------H--VDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGFV 93 (708)
Q Consensus 25 h~~~v~~~~~s~~~~-~la~~~~dg~v~iwd~~~~~------~--~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i 93 (708)
-..+|..+.|.++.. .||+|+.|..|+||-+..+. . ....|..|. ..|+++.|+ |+.|++|+.+|.|
T Consensus 12 ~~~pv~s~dfq~n~~~~laT~G~D~~iriW~v~r~~~~~~~~~V~y~s~Ls~H~--~aVN~vRf~p~gelLASg~D~g~v 89 (434)
T KOG1009|consen 12 DHEPVYSVDFQKNSLNKLATAGGDKDIRIWKVNRSEPGGGDMKVEYLSSLSRHT--RAVNVVRFSPDGELLASGGDGGEV 89 (434)
T ss_pred CCCceEEEEeccCcccceecccCccceeeeeeeecCCCCCceeEEEeecccCCc--ceeEEEEEcCCcCeeeecCCCceE
Confidence 357899999999876 99999999999999886521 1 123788899 999999999 8999999999999
Q ss_pred EEEECC--------C--------CeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEeccccccc
Q psy12614 94 NEYDMR--------R--------LNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGR 157 (708)
Q Consensus 94 ~vwd~~--------~--------~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~ 157 (708)
.+|-.. + ......+.+|...|..++|+||+.++++++-|+.+++||+..|.+. ..+..|...
T Consensus 90 ~lWk~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~diydL~Ws~d~~~l~s~s~dns~~l~Dv~~G~l~--~~~~dh~~y 167 (434)
T KOG1009|consen 90 FLWKQGDVRIFDADTEADLNKEKWVVKKVLRGHRDDIYDLAWSPDSNFLVSGSVDNSVRLWDVHAGQLL--AILDDHEHY 167 (434)
T ss_pred EEEEecCcCCccccchhhhCccceEEEEEecccccchhhhhccCCCceeeeeeccceEEEEEeccceeE--eeccccccc
Confidence 999765 2 1235567789999999999999999999999999999999999998 889999999
Q ss_pred EEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEe----cccCC---------C---CCceeEEEEEEccCCE-EEE
Q psy12614 158 ILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSL----DKSSK---------F---SKNTAVWCVAFCADFT-IIT 219 (708)
Q Consensus 158 v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~----~~~~~---------~---~~~~~v~~~~~~~~~~-l~~ 219 (708)
|..++|.|-++++++-+.| ..+.+++...+.+..... ....+ | .-......++|+|||. +++
T Consensus 168 vqgvawDpl~qyv~s~s~dr~~~~~~~~~~~~~~~~~~~~m~~~~~~~~e~~s~rLfhDeTlksFFrRlsfTPdG~llvt 247 (434)
T KOG1009|consen 168 VQGVAWDPLNQYVASKSSDRHPEGFSAKLKQVIKRHGLDIMPAKAFNEREGKSTRLFHDETLKSFFRRLSFTPDGSLLVT 247 (434)
T ss_pred cceeecchhhhhhhhhccCcccceeeeeeeeeeeeeeeeEeeecccCCCCcceeeeeecCchhhhhhhcccCCCCcEEEc
Confidence 9999999999999999888 677777654443332220 00000 0 0022234578899996 443
Q ss_pred Ec----CCCc-----EEEEeCCC-CeeEEEeeccccCeEEEEEeC------------------CCCEEEEEecCCeEEEE
Q psy12614 220 GD----SGGF-----VRFWDGKT-GVQWSDVKTHKKDILALTVSE------------------DENYLYCAGVDPTVVCF 271 (708)
Q Consensus 220 ~~----~dg~-----i~~wd~~~-~~~~~~~~~~~~~i~~~~~s~------------------~~~~l~~~~~dg~i~iw 271 (708)
.+ ..+. .++++-.. .++...+++...+...+.|+| -+-.++.++ ...+++|
T Consensus 248 Pag~~~~g~~~~~n~tYvfsrk~l~rP~~~lp~~~k~~lavr~~pVy~elrp~~~~~~~~~lpyrlvfaiAt-~~svyvy 326 (434)
T KOG1009|consen 248 PAGLFKVGGGVFRNTSYVFSRKDLKRPAARLPSPKKPALAVRFSPVYYELRPLSSEKFLFVLPYRLVFAIAT-KNSVYVY 326 (434)
T ss_pred ccceeeeCCceeeceeEeeccccccCceeecCCCCcceEEEEeeeeEEEeccccccccccccccceEEEEee-cceEEEe
Confidence 22 1222 34454322 234455555556666666654 222344555 4589999
Q ss_pred EccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEEEcCCCeEEEEeCCCCc
Q psy12614 272 QRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSGGLDSYLSLSYYPPKT 333 (708)
Q Consensus 272 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~~~ 333 (708)
|.++ -. .....-.-|-..|+.++|+ |..|+..+.||...+-.++..+
T Consensus 327 dtq~--------~~-------P~~~v~nihy~~iTDiaws~dg~~l~vSS~DGyCS~vtfe~~e 375 (434)
T KOG1009|consen 327 DTQT--------LE-------PLAVVDNIHYSAITDIAWSDDGSVLLVSSTDGFCSLVTFEPWE 375 (434)
T ss_pred cccc--------cc-------ceEEEeeeeeeeecceeecCCCcEEEEeccCCceEEEEEcchh
Confidence 9887 22 1233345688999999999 8899999999998887766554
|
|
| >KOG4497|consensus | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.3e-18 Score=152.44 Aligned_cols=384 Identities=10% Similarity=0.082 Sum_probs=245.8
Q ss_pred EEEECCCCCEEEEecCCeEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE--EEEEcCCCcEEEEeCCCCeeE
Q psy12614 160 CTAWHSSGDYLVTGCAAAVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT--IITGDSGGFVRFWDGKTGVQW 237 (708)
Q Consensus 160 ~~~~s~d~~~l~~~~~d~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--l~~~~~dg~i~~wd~~~~~~~ 237 (708)
-.+|||+|+++|++++-.+.|=|.++.+..+.+.. -..|.-+.|..|.. +.....++.|.+|++...+-.
T Consensus 13 ~c~fSp~g~yiAs~~~yrlviRd~~tlq~~qlf~c--------ldki~yieW~ads~~ilC~~yk~~~vqvwsl~Qpew~ 84 (447)
T KOG4497|consen 13 FCSFSPCGNYIASLSRYRLVIRDSETLQLHQLFLC--------LDKIVYIEWKADSCHILCVAYKDPKVQVWSLVQPEWY 84 (447)
T ss_pred ceeECCCCCeeeeeeeeEEEEeccchhhHHHHHHH--------HHHhhheeeeccceeeeeeeeccceEEEEEeecceeE
Confidence 46799999999999877888888777665443322 35567788888884 556777899999999988888
Q ss_pred EEeeccccCeEEEEEeCCCCEEE-EEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCE
Q psy12614 238 SDVKTHKKDILALTVSEDENYLY-CAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNR 314 (708)
Q Consensus 238 ~~~~~~~~~i~~~~~s~~~~~l~-~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~ 314 (708)
..+.....++.+++|||||+.+. +...+-.|.+|.+.+ . ....+......+..++|+ |++
T Consensus 85 ckIdeg~agls~~~WSPdgrhiL~tseF~lriTVWSL~t--------~---------~~~~~~~pK~~~kg~~f~~dg~f 147 (447)
T KOG4497|consen 85 CKIDEGQAGLSSISWSPDGRHILLTSEFDLRITVWSLNT--------Q---------KGYLLPHPKTNVKGYAFHPDGQF 147 (447)
T ss_pred EEeccCCCcceeeeECCCcceEeeeecceeEEEEEEecc--------c---------eeEEecccccCceeEEECCCCce
Confidence 88888899999999999996655 555688999999998 3 123333445567888888 666
Q ss_pred EEEEcCCCeEEEEeCCCCc----eeecCccCCCCceEEEEcCCcEEEEEc---CCeEEEEEecCCCCCCCCCCCCCCccc
Q psy12614 315 LYSGGLDSYLSLSYYPPKT----LVKYPCTLAQSTPVSLAKDIQHVLLQY---TSHLELWSLGSAQSTDLSSHSNTTGVP 387 (708)
Q Consensus 315 l~s~~~d~~i~iw~~~~~~----~~~~~~~~~~~~~~~~s~~~~~l~~~~---~~~i~i~~~~~~~~~~~~~~~~~~~~~ 387 (708)
.+..+.-...-..++.... ++.+.-+......+.++|||..+++.. +-.|..|...
T Consensus 148 ~ai~sRrDCkdyv~i~~c~~W~ll~~f~~dT~DltgieWsPdg~~laVwd~~Leykv~aYe~~----------------- 210 (447)
T KOG4497|consen 148 CAILSRRDCKDYVQISSCKAWILLKEFKLDTIDLTGIEWSPDGNWLAVWDNVLEYKVYAYERG----------------- 210 (447)
T ss_pred eeeeecccHHHHHHHHhhHHHHHHHhcCCCcccccCceECCCCcEEEEecchhhheeeeeeec-----------------
Confidence 6655543211111111111 233333445567899999999888642 2233333322
Q ss_pred CCCCceEEEEEEecCCCceEEEEeCCCCcEEEEEc-CCceEEEEEEecC---CcceeEEeecCCccc------c--ccee
Q psy12614 388 LLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYST-ESCVRLHSLDLDG---DKPQISRIKNLPAPL------F--KSIF 455 (708)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~-d~~i~i~~~~~~~---~~~~~~~~~~~~~~~------~--~~~i 455 (708)
-.+..++|+|.+++|++|. |+.+++.+--+-+ ....+..++.-..|. . ....
T Consensus 211 ----------------lG~k~v~wsP~~qflavGsyD~~lrvlnh~tWk~f~eflhl~s~~dp~~~~~~ke~~~~~ql~~ 274 (447)
T KOG4497|consen 211 ----------------LGLKFVEWSPCNQFLAVGSYDQMLRVLNHFTWKPFGEFLHLCSYHDPTLHLLEKETFSIVQLLH 274 (447)
T ss_pred ----------------cceeEEEeccccceEEeeccchhhhhhceeeeeehhhhccchhccCchhhhhhhhhcchhhhcc
Confidence 3467889999999999976 9999886543211 111111100000000 0 1122
Q ss_pred EEEEEecCCCeEEEEecCC-cEEEecCCCeEEEEEecCCCCC-ccCcceEEEEECCCCcEEEEEecC--CeEEEEECCce
Q psy12614 456 THVLISADSTLLLAVSLNG-PLYIIDLSSLEIKYCVDPYKSN-LMSDVISLVQMSECKQYIVCADRK--SHVVIWKNGQH 531 (708)
Q Consensus 456 ~~~~~s~d~~~l~~~~~dg-~i~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~s~~~~~l~~~~~d--~~i~iw~~~~~ 531 (708)
.++.|.|..--.- -.... .+|....- +..+..+++.... .....+..++||+|..|+|+-... +.+-+||+.+.
T Consensus 275 ~cLsf~p~~~~a~-~~~~se~~YE~~~~-pv~~~~lkp~tD~pnPk~g~g~lafs~Ds~y~aTrnd~~PnalW~Wdlq~l 352 (447)
T KOG4497|consen 275 HCLSFTPTDLEAH-IWEESETIYEQQMT-PVKVHKLKPPTDFPNPKCGAGKLAFSCDSTYAATRNDKYPNALWLWDLQNL 352 (447)
T ss_pred cccccCCCccccC-ccccchhhhhhhhc-ceeeecccCCCCCCCcccccceeeecCCceEEeeecCCCCceEEEEechhh
Confidence 3355555321111 11111 13333211 1233333322111 003467889999999999998533 57999999954
Q ss_pred ee-ecCCCCCCceEEEEcCCCCEEEEEecCCcEEEEEcCCCCCCchhhhhhccCchhhhcCCCCeeEEEeCCCCCceEEE
Q psy12614 532 HA-SLPRYRKPSTAMAIHPTLSTLVTVYSDHRIVEFDLNRKAFTTFSRKLETNHPNEWLSRQLPVLGIEFDPQDSSLIYL 610 (708)
Q Consensus 532 ~~-~~~~~~~~v~~l~~s~d~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~~~~l~~~ 610 (708)
.. ..-....+|.+..|.|....|+.+.....+++|........ ..| .....|..++|..+|..++..
T Consensus 353 ~l~avLiQk~piraf~WdP~~prL~vctg~srLY~W~psg~~~V--------~vP----~~GF~i~~l~W~~~g~~i~l~ 420 (447)
T KOG4497|consen 353 KLHAVLIQKHPIRAFEWDPGRPRLVVCTGKSRLYFWAPSGPRVV--------GVP----KKGFNIQKLQWLQPGEFIVLC 420 (447)
T ss_pred hhhhhhhhccceeEEEeCCCCceEEEEcCCceEEEEcCCCceEE--------ecC----CCCceeeeEEecCCCcEEEEE
Confidence 33 33345578999999999999998888888999998875443 111 223579999999999999999
Q ss_pred EcCee
Q psy12614 611 MDDSA 615 (708)
Q Consensus 611 ~~d~~ 615 (708)
+.|..
T Consensus 421 ~kDaf 425 (447)
T KOG4497|consen 421 GKDAF 425 (447)
T ss_pred cCCce
Confidence 98864
|
|
| >KOG4227|consensus | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.4e-18 Score=155.72 Aligned_cols=304 Identities=15% Similarity=0.155 Sum_probs=213.7
Q ss_pred ccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCC------CCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCcE
Q psy12614 22 YAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISE------TPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGFV 93 (708)
Q Consensus 22 ~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~------~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i 93 (708)
+.+|.+.|+++.||.++++||+|+.|-.+++|++.. .+.+. +.+|.....|.|++|. ..+|++|+.+++|
T Consensus 52 ~~~H~GCiNAlqFS~N~~~L~SGGDD~~~~~W~~de~~~~k~~KPI~--~~~~~H~SNIF~L~F~~~N~~~~SG~~~~~V 129 (609)
T KOG4227|consen 52 VREHTGCINALQFSHNDRFLASGGDDMHGRVWNVDELMVRKTPKPIG--VMEHPHRSNIFSLEFDLENRFLYSGERWGTV 129 (609)
T ss_pred hhhhccccceeeeccCCeEEeecCCcceeeeechHHHHhhcCCCCce--eccCccccceEEEEEccCCeeEecCCCccee
Confidence 578999999999999999999999999999999974 23333 3344323899999999 7788999999999
Q ss_pred EEEECCCCeEeEEEee--cCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCc-EEEEEecccccccEEEEEECCCCC-E
Q psy12614 94 NEYDMRRLNIKSSTAV--TSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEG-LLYEKLLDRQQGRILCTAWHSSGD-Y 169 (708)
Q Consensus 94 ~vwd~~~~~~~~~~~~--~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~-~~~~~~~~~~~~~v~~~~~s~d~~-~ 169 (708)
+.-|+++.+.+..+.. ..+.|..+..+|-.+.|++.+.++.|.+||+.... ......+.........+.|+|... +
T Consensus 130 I~HDiEt~qsi~V~~~~~~~~~VY~m~~~P~DN~~~~~t~~~~V~~~D~Rd~~~~~~~~~~AN~~~~F~t~~F~P~~P~L 209 (609)
T KOG4227|consen 130 IKHDIETKQSIYVANENNNRGDVYHMDQHPTDNTLIVVTRAKLVSFIDNRDRQNPISLVLPANSGKNFYTAEFHPETPAL 209 (609)
T ss_pred EeeecccceeeeeecccCcccceeecccCCCCceEEEEecCceEEEEeccCCCCCCceeeecCCCccceeeeecCCCcee
Confidence 9999999988877653 34689999999999999999999999999998654 211122333355678899999775 4
Q ss_pred EEEecCC-eEEEEEcCCCce-EEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCeeEEEeeccc--
Q psy12614 170 LVTGCAA-AVRVWDIHKGHA-IHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDVKTHK-- 244 (708)
Q Consensus 170 l~~~~~d-~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~~~~~-- 244 (708)
|++.+.. .+-+||.+.... +.......... .....-..+.|+|+|+ +++.-....-.+||+-+.++......|.
T Consensus 210 i~~~~~~~G~~~~D~R~~~~~~~~~~~~~~L~-~~~~~~M~~~~~~~G~Q~msiRR~~~P~~~D~~S~R~~V~k~D~N~~ 288 (609)
T KOG4227|consen 210 ILVNSETGGPNVFDRRMQARPVYQRSMFKGLP-QENTEWMGSLWSPSGNQFMSIRRGKCPLYFDFISQRCFVLKSDHNPN 288 (609)
T ss_pred EEeccccCCCCceeeccccchHHhhhccccCc-ccchhhhheeeCCCCCeehhhhccCCCEEeeeecccceeEeccCCCC
Confidence 5666666 999999875332 11111000000 1123346788999994 7766666666678876654432221222
Q ss_pred -----cCeEEEEEeCCCCEEEEEecCCeEEEEEccCCccccc--CCCCCCCC-cc--e--EEeEEEeccccceEEEEEe-
Q psy12614 245 -----KDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCS--TSGPEQGS-SV--W--VRSVNRVIHEGDVKSLALH- 311 (708)
Q Consensus 245 -----~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~--~~g~~~~~-~~--~--~~~~~~~~~~~~v~~l~~~- 311 (708)
..+.+++|..|- .+++|+.+-.|++|.+...+..-- ..|.+... +. + .....+++|..-+..+.|+
T Consensus 289 GY~N~~T~KS~~F~~D~-~v~tGSD~~~i~~WklP~~~ds~G~~~IG~~~~~~~~~~~i~~~~~VLrGHRSv~NQVRF~~ 367 (609)
T KOG4227|consen 289 GYCNIKTIKSMTFIDDY-TVATGSDHWGIHIWKLPRANDSYGFTQIGHDEEEMPSEIFIEKELTVLRGHRSVPNQVRFSQ 367 (609)
T ss_pred cceeeeeeeeeeeecce-eeeccCcccceEEEecCCCccccCccccCcchhhCchhheecceeEEEecccccccceeecC
Confidence 246678887665 589999999999999875221100 00110000 00 1 1356789999999999999
Q ss_pred -CCEEEEEcCCCeEEEEeC
Q psy12614 312 -GNRLYSGGLDSYLSLSYY 329 (708)
Q Consensus 312 -~~~l~s~~~d~~i~iw~~ 329 (708)
..+|++.+....+++|.-
T Consensus 368 H~~~l~SSGVE~~~KlWS~ 386 (609)
T KOG4227|consen 368 HNNLLVSSGVENSFKLWSD 386 (609)
T ss_pred CcceEeccchhhheecccc
Confidence 788889999999999975
|
|
| >KOG0642|consensus | Back alignment and domain information |
|---|
Probab=99.82 E-value=3e-19 Score=169.68 Aligned_cols=250 Identities=16% Similarity=0.262 Sum_probs=190.4
Q ss_pred eccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCC-------CeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCC
Q psy12614 21 FYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISET-------PHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQG 91 (708)
Q Consensus 21 ~~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~-------~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~ 91 (708)
.+..|.+.|+.++|.|...-|++++.||.+++|+++.. .....+|.+|. ++|.|+++. +..+++|+.||
T Consensus 289 tl~s~~d~ir~l~~~~sep~lit~sed~~lk~WnLqk~~~s~~~~~epi~tfraH~--gPVl~v~v~~n~~~~ysgg~Dg 366 (577)
T KOG0642|consen 289 TLRSHDDCIRALAFHPSEPVLITASEDGTLKLWNLQKAKKSAEKDVEPILTFRAHE--GPVLCVVVPSNGEHCYSGGIDG 366 (577)
T ss_pred eeecchhhhhhhhcCCCCCeEEEeccccchhhhhhcccCCccccceeeeEEEeccc--CceEEEEecCCceEEEeeccCc
Confidence 56789999999999999999999999999999999431 11224899999 999999999 99999999999
Q ss_pred cEEEEECCCC----------eEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEeccc--ccccEE
Q psy12614 92 FVNEYDMRRL----------NIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDR--QQGRIL 159 (708)
Q Consensus 92 ~i~vwd~~~~----------~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~--~~~~v~ 159 (708)
+|+.|++... .....+.+|.+.|+.+++|+....|++++.||+++.|+....... .+.. ..+.-.
T Consensus 367 ~I~~w~~p~n~dp~ds~dp~vl~~~l~Ghtdavw~l~~s~~~~~Llscs~DgTvr~w~~~~~~~~---~f~~~~e~g~Pl 443 (577)
T KOG0642|consen 367 TIRCWNLPPNQDPDDSYDPSVLSGTLLGHTDAVWLLALSSTKDRLLSCSSDGTVRLWEPTEESPC---TFGEPKEHGYPL 443 (577)
T ss_pred eeeeeccCCCCCcccccCcchhccceeccccceeeeeecccccceeeecCCceEEeeccCCcCcc---ccCCccccCCcc
Confidence 9999976532 245678899999999999999999999999999999998876652 2222 223445
Q ss_pred EEEECCCCCEEEEecCC--eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCC-EEEEEcCCCcEEEEeCCCCee
Q psy12614 160 CTAWHSSGDYLVTGCAA--AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADF-TIITGDSGGFVRFWDGKTGVQ 236 (708)
Q Consensus 160 ~~~~s~d~~~l~~~~~d--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~~~~~dg~i~~wd~~~~~~ 236 (708)
++.|-.....+..++.. .-.+.+.+.+..+..+.............+..+.+.|.+ ..+++..|+.|+++|..++..
T Consensus 444 svd~~ss~~a~~~~s~~~~~~~~~~~ev~s~~~~~~s~~~~~~~~~~~in~vVs~~~~~~~~~~hed~~Ir~~dn~~~~~ 523 (577)
T KOG0642|consen 444 SVDRTSSRPAHSLASFRFGYTSIDDMEVVSDLLIFESSASPGPRRYPQINKVVSHPTADITFTAHEDRSIRFFDNKTGKI 523 (577)
T ss_pred eEeeccchhHhhhhhcccccccchhhhhhhheeeccccCCCcccccCccceEEecCCCCeeEecccCCceeccccccccc
Confidence 56654333122222222 333444444444444332211110112456677777776 478889999999999999999
Q ss_pred EEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccC
Q psy12614 237 WSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTR 275 (708)
Q Consensus 237 ~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~ 275 (708)
+.....|...++++++.|+|-+|++++.|+.+++|.+..
T Consensus 524 l~s~~a~~~svtslai~~ng~~l~s~s~d~sv~l~kld~ 562 (577)
T KOG0642|consen 524 LHSMVAHKDSVTSLAIDPNGPYLMSGSHDGSVRLWKLDV 562 (577)
T ss_pred chheeeccceecceeecCCCceEEeecCCceeehhhccc
Confidence 999999999999999999999999999999999999876
|
|
| >KOG2041|consensus | Back alignment and domain information |
|---|
Probab=99.81 E-value=4.3e-16 Score=152.14 Aligned_cols=523 Identities=11% Similarity=0.114 Sum_probs=337.5
Q ss_pred CCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCC--------------eEEEEEecCCCCCcEEEEEEe--CCEEEEEc
Q psy12614 25 EPKVINCIACEPKSSRLAVSRADQSIEIWDISETP--------------HVDRVFIGDPLSNSIECLTWF--NDRLFSGG 88 (708)
Q Consensus 25 h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~--------------~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~ 88 (708)
......|++|+....++|.|+.||.+++-.+.+.. ....++.||. ++|.-+.|+ .+.|-++.
T Consensus 13 nnvkL~c~~WNke~gyIAcgG~dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtLeGH~--~sV~vvTWNe~~QKLTtSD 90 (1189)
T KOG2041|consen 13 NNVKLHCAEWNKESGYIACGGADGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEGHN--ASVMVVTWNENNQKLTTSD 90 (1189)
T ss_pred CCceEEEEEEcccCCeEEeccccceeEEEEccccCCcccccccccccccchhhhhccCc--ceEEEEEeccccccccccC
Confidence 34567899999999999999999999999886521 1124788999 999999999 78899999
Q ss_pred CCCcEEEEECCCCeEeEEE--eecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCC
Q psy12614 89 LQGFVNEYDMRRLNIKSST--AVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSS 166 (708)
Q Consensus 89 ~d~~i~vwd~~~~~~~~~~--~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d 166 (708)
.+|.|.+|=+-.|.-...+ ....+.|.+|+|+.||..++....||.|.+=.+++... +.+.+.+. ....+.|++|
T Consensus 91 t~GlIiVWmlykgsW~EEMiNnRnKSvV~SmsWn~dG~kIcIvYeDGavIVGsvdGNRI-wgKeLkg~--~l~hv~ws~D 167 (1189)
T KOG2041|consen 91 TSGLIIVWMLYKGSWCEEMINNRNKSVVVSMSWNLDGTKICIVYEDGAVIVGSVDGNRI-WGKELKGQ--LLAHVLWSED 167 (1189)
T ss_pred CCceEEEEeeecccHHHHHhhCcCccEEEEEEEcCCCcEEEEEEccCCEEEEeecccee-cchhcchh--eccceeeccc
Confidence 9999999988776532221 23456799999999999999999999998877765433 33444432 2347889999
Q ss_pred CCEEEEecCC-eEEEEEcCCCc-------eEEEEEecccCCCCCceeEEEEEEc--------cCC-EEEEEcCCCcEEEE
Q psy12614 167 GDYLVTGCAA-AVRVWDIHKGH-------AIHKMSLDKSSKFSKNTAVWCVAFC--------ADF-TIITGDSGGFVRFW 229 (708)
Q Consensus 167 ~~~l~~~~~d-~i~iwd~~~~~-------~~~~~~~~~~~~~~~~~~v~~~~~~--------~~~-~l~~~~~dg~i~~w 229 (708)
.+.++.+-.+ .+.++|.+..- +........+ .....+..+.|. ||. .++++-.+|.+.+-
T Consensus 168 ~~~~Lf~~ange~hlydnqgnF~~Kl~~~c~Vn~tg~~s---~~~~kia~i~w~~g~~~~v~pdrP~lavcy~nGr~QiM 244 (1189)
T KOG2041|consen 168 LEQALFKKANGETHLYDNQGNFERKLEKDCEVNGTGIFS---NFPTKIAEIEWNTGPYQPVPPDRPRLAVCYANGRMQIM 244 (1189)
T ss_pred HHHHHhhhcCCcEEEecccccHHHhhhhceEEeeeeeec---CCCccccceeeccCccccCCCCCCEEEEEEcCceehhh
Confidence 9988888777 89999865321 1111111100 012234555554 344 48888889988887
Q ss_pred eCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEecCC---------eEEEEEccCCcccccCCCCCCCCcceEEeEEEec
Q psy12614 230 DGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDP---------TVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVI 300 (708)
Q Consensus 230 d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg---------~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 300 (708)
.-.+......+. ....+..+.|+++|..|++++.+. .|.+|..- |. ....+..
T Consensus 245 R~eND~~Pvv~d-tgm~~vgakWnh~G~vLAvcG~~~da~~~~d~n~v~Fysp~---------G~--------i~gtlkv 306 (1189)
T KOG2041|consen 245 RSENDPEPVVVD-TGMKIVGAKWNHNGAVLAVCGNDSDADEPTDSNKVHFYSPY---------GH--------IVGTLKV 306 (1189)
T ss_pred hhcCCCCCeEEe-cccEeecceecCCCcEEEEccCcccccCccccceEEEeccc---------hh--------heEEEec
Confidence 655443333333 236788999999999999988652 45555443 33 4567777
Q ss_pred cccceEEEEEe-CCEEEEEcCCCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEE---E---cCCeEEEEEecCCC
Q psy12614 301 HEGDVKSLALH-GNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLL---Q---YTSHLELWSLGSAQ 373 (708)
Q Consensus 301 ~~~~v~~l~~~-~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~---~---~~~~i~i~~~~~~~ 373 (708)
....|++++|. +.+-+.-..|+.|.+-+++..-...+. .+.++. . ....|.+||..+.+
T Consensus 307 pg~~It~lsWEg~gLriA~AvdsfiyfanIRP~ykWgy~--------------e~TvVy~y~~~e~p~y~i~Fwdtk~ne 372 (1189)
T KOG2041|consen 307 PGSCITGLSWEGTGLRIAIAVDSFIYFANIRPEYKWGYI--------------EETVVYVYQKEELPQYGIMFWDTKTNE 372 (1189)
T ss_pred CCceeeeeEEcCCceEEEEEecceEEEEeecccceEEEe--------------eeEEEEEEccCCCcceEEEEEecccCh
Confidence 78899999999 455455567888887666543211111 122222 1 12347899988866
Q ss_pred CCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEE-EcCCceEEEEEEecCCcceeEEeecCCcccc-
Q psy12614 374 STDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAY-STESCVRLHSLDLDGDKPQISRIKNLPAPLF- 451 (708)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~-~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~- 451 (708)
+.+.. -....++++..+.-.|+. .+++.+.-++.-...+..-+-. +....+
T Consensus 373 --------------------k~vK~----V~~~~~~a~~~ehCvL~~~~d~~~i~e~s~le~~~~~~~l~---LCNSIGT 425 (1189)
T KOG2041|consen 373 --------------------KTVKT----VTHFENMAFYREHCVLINRQDDGVIPEYSTLENRSRVYFLQ---LCNSIGT 425 (1189)
T ss_pred --------------------hhhhh----hcceeehheecccEEEEeccccCCCcchhhhhcccceEEEe---eecccCC
Confidence 22222 133456777777766776 4566665552111111100000 111111
Q ss_pred -----cceeEEEEEecCCCeEEEEecCCc-EEEecCCCeEE-----------------------EEE----ecCCCCCcc
Q psy12614 452 -----KSIFTHVLISADSTLLLAVSLNGP-LYIIDLSSLEI-----------------------KYC----VDPYKSNLM 498 (708)
Q Consensus 452 -----~~~i~~~~~s~d~~~l~~~~~dg~-i~~~~~~~~~~-----------------------~~~----~~~~~~~~~ 498 (708)
...|.-.-..-++..++.++.+.. +|.+....... -.. -+...|.
T Consensus 426 ~lD~kytdirP~Fv~vn~~~vviAS~e~~~iWhy~~pK~~s~l~~~k~rkegr~h~Ddtp~ga~d~~l~ys~kt~~G~-- 503 (1189)
T KOG2041|consen 426 SLDYKYTDIRPKFVCVNGICVVIASEERYFIWHYVLPKFNSVLAGVKIRKEGRFHGDDTPEGAQDRTLEYSTKTLLGS-- 503 (1189)
T ss_pred cCCCCcceeeeeEEEecceEEEEeccccEEEEEEeccchhhhhhhhhhcccccccCCCCccchhhceeeccceeeccC--
Confidence 112222333447788888888888 88875431000 000 0122344
Q ss_pred CcceEEEEECCCCcEEEEEecCCeEEEEECCceee-ecCCCCCCceEEEEcCCCCEEEEEecCCcEEEEEcCCCCCCchh
Q psy12614 499 SDVISLVQMSECKQYIVCADRKSHVVIWKNGQHHA-SLPRYRKPSTAMAIHPTLSTLVTVYSDHRIVEFDLNRKAFTTFS 577 (708)
Q Consensus 499 ~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~-~~~~~~~~v~~l~~s~d~~~l~~~~~dg~i~vwd~~~~~~~~~~ 577 (708)
.++|.+++.| .++|.++-..|.|+-|++..... .-..-+..|.+++.+.+...||....-|.+.+.|+.-.....
T Consensus 504 ~DpICAl~~s--dk~l~vareSG~I~rySl~nv~l~n~y~~n~~~y~~~lNCnstRlAiId~~gv~tf~dLd~d~~g~-- 579 (1189)
T KOG2041|consen 504 KDPICALCIS--DKFLMVARESGGIYRYSLNNVVLTNSYPVNPSIYSIKLNCNSTRLAIIDLVGVVTFQDLDYDFDGD-- 579 (1189)
T ss_pred CCcceeeeec--ceEEEEEeccCceEEEEecceeeeeccccCchheeEeeccCcchhhhhhhhceeeeeecccccCcc--
Confidence 6788888884 57899999999999999995443 222345678999999999999999989999999887321110
Q ss_pred hhhhccCchhhhcCCCCeeEEEeCCCCCceEEEEcCeeEEEEecCCCC
Q psy12614 578 RKLETNHPNEWLSRQLPVLGIEFDPQDSSLIYLMDDSALCVINKNKSL 625 (708)
Q Consensus 578 ~~~~~~~~~~~~~~~~~i~~l~~s~~~~~l~~~~~d~~i~~wd~~~~~ 625 (708)
.+...+......|+++.|..|+..|+..-.-..++|++-..+.
T Consensus 580 -----ql~~~~~~errDVWd~~Wa~dNp~llAlmeKtrmyifrgndpe 622 (1189)
T KOG2041|consen 580 -----QLKLIYTSERRDVWDYEWAQDNPNLLALMEKTRMYIFRGNDPE 622 (1189)
T ss_pred -----eeeeeehhhhhhhhhhhhccCCchHHhhhhhceEEEecCcCcc
Confidence 1111233345578999999999888777777778888765444
|
|
| >KOG0303|consensus | Back alignment and domain information |
|---|
Probab=99.81 E-value=6.5e-18 Score=153.29 Aligned_cols=200 Identities=17% Similarity=0.250 Sum_probs=164.1
Q ss_pred EEecCCCCCcEEEEEEe---CCEEEEEcCCCcEEEEECCCC-------eEeEEEeecCCceEEEEEecC-CCEEEEEeCC
Q psy12614 64 VFIGDPLSNSIECLTWF---NDRLFSGGLQGFVNEYDMRRL-------NIKSSTAVTSGTCWCLSVHKK-KRLLAAGTEQ 132 (708)
Q Consensus 64 ~~~~h~~~~~v~~l~~~---~~~l~s~~~d~~i~vwd~~~~-------~~~~~~~~~~~~v~~~~~s~~-~~~la~~~~d 132 (708)
.+.||. ++|..++|+ .+.||+|+.|.+|.||.+..+ +++..+.+|...|--++|+|- .+.|++++.|
T Consensus 76 ~v~GHt--~~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH~rrVg~V~wHPtA~NVLlsag~D 153 (472)
T KOG0303|consen 76 LVCGHT--APVLDIDWCPFNDCVIASGSEDTKVMVWQIPENGLTRDLTEPVVELYGHQRRVGLVQWHPTAPNVLLSAGSD 153 (472)
T ss_pred CccCcc--ccccccccCccCCceeecCCCCceEEEEECCCcccccCcccceEEEeecceeEEEEeecccchhhHhhccCC
Confidence 577999 999999999 889999999999999998764 357788999999999999995 4678899999
Q ss_pred CcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEE
Q psy12614 133 GHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAF 211 (708)
Q Consensus 133 ~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 211 (708)
.+|.+||+.+|+.. ..+. |...|.++.|+-||.+|++.+.| .|+|||.++++.+..-..+. ...-..+.|
T Consensus 154 n~v~iWnv~tgeal--i~l~-hpd~i~S~sfn~dGs~l~TtckDKkvRv~dpr~~~~v~e~~~he------G~k~~Raif 224 (472)
T KOG0303|consen 154 NTVSIWNVGTGEAL--ITLD-HPDMVYSMSFNRDGSLLCTTCKDKKVRVIDPRRGTVVSEGVAHE------GAKPARAIF 224 (472)
T ss_pred ceEEEEeccCCcee--eecC-CCCeEEEEEeccCCceeeeecccceeEEEcCCCCcEeeeccccc------CCCcceeEE
Confidence 99999999999987 4455 99999999999999999999999 99999999999998874332 233455667
Q ss_pred ccCCEEEEEc----CCCcEEEEeCCCCee---EEEeeccccCeEEEEEeCCCCEEEEEe-cCCeEEEEEccC
Q psy12614 212 CADFTIITGD----SGGFVRFWDGKTGVQ---WSDVKTHKKDILALTVSEDENYLYCAG-VDPTVVCFQRTR 275 (708)
Q Consensus 212 ~~~~~l~~~~----~dg~i~~wd~~~~~~---~~~~~~~~~~i~~~~~s~~~~~l~~~~-~dg~i~iw~~~~ 275 (708)
..+|.+++.+ ++.++.+||..+-+. ...+. ....|.---|.+|.+.++.++ .|+.|+.|.+..
T Consensus 225 l~~g~i~tTGfsr~seRq~aLwdp~nl~eP~~~~elD-tSnGvl~PFyD~dt~ivYl~GKGD~~IRYyEit~ 295 (472)
T KOG0303|consen 225 LASGKIFTTGFSRMSERQIALWDPNNLEEPIALQELD-TSNGVLLPFYDPDTSIVYLCGKGDSSIRYFEITN 295 (472)
T ss_pred eccCceeeeccccccccceeccCcccccCcceeEEec-cCCceEEeeecCCCCEEEEEecCCcceEEEEecC
Confidence 7888766554 467899999765432 34444 345666677889988887554 589999999987
|
|
| >KOG1007|consensus | Back alignment and domain information |
|---|
Probab=99.80 E-value=4.8e-18 Score=147.67 Aligned_cols=294 Identities=15% Similarity=0.202 Sum_probs=202.4
Q ss_pred CCCcEEEEECCCCe---EeEEEeecCCceEEEEEecCCC-EEEEEeCC-------CcEEEEEccCCcEE-------EEEe
Q psy12614 89 LQGFVNEYDMRRLN---IKSSTAVTSGTCWCLSVHKKKR-LLAAGTEQ-------GHINLFQISDEGLL-------YEKL 150 (708)
Q Consensus 89 ~d~~i~vwd~~~~~---~~~~~~~~~~~v~~~~~s~~~~-~la~~~~d-------~~i~iwd~~~~~~~-------~~~~ 150 (708)
.|+.|.+-+++.+. ....+..|.+.|+.++-+|-.+ .|+++..+ -.+.||.+....-. ....
T Consensus 38 ~dNqVhll~~d~e~s~l~skvf~h~agEvw~las~P~d~~ilaT~yn~~s~s~vl~~aaiw~ipe~~~~S~~~tlE~v~~ 117 (370)
T KOG1007|consen 38 EDNQVHLLRLDSEGSELLSKVFFHHAGEVWDLASSPFDQRILATVYNDTSDSGVLTGAAIWQIPEPLGQSNSSTLECVAS 117 (370)
T ss_pred CcceeEEEEecCccchhhhhhhhcCCcceehhhcCCCCCceEEEEEeccCCCcceeeEEEEecccccCccccchhhHhhc
Confidence 35677777666543 2345667889999999999554 55665442 23689988643211 0122
Q ss_pred cc-cccccEEEEEECCCCCEEEEecCCeEEEEEcCCCce-EEEEEecccCCCCCceeEEEEEEcc--CCEEEEEcCCCcE
Q psy12614 151 LD-RQQGRILCTAWHSSGDYLVTGCAAAVRVWDIHKGHA-IHKMSLDKSSKFSKNTAVWCVAFCA--DFTIITGDSGGFV 226 (708)
Q Consensus 151 ~~-~~~~~v~~~~~s~d~~~l~~~~~d~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~--~~~l~~~~~dg~i 226 (708)
+. .+-+.|.|+.|.|++..+++.....|.+|++..+.. ...+..... . .+....++-+|+| ||..+....|+++
T Consensus 118 Ldteavg~i~cvew~Pns~klasm~dn~i~l~~l~ess~~vaev~ss~s-~-e~~~~ftsg~WspHHdgnqv~tt~d~tl 195 (370)
T KOG1007|consen 118 LDTEAVGKINCVEWEPNSDKLASMDDNNIVLWSLDESSKIVAEVLSSES-A-EMRHSFTSGAWSPHHDGNQVATTSDSTL 195 (370)
T ss_pred CCHHHhCceeeEEEcCCCCeeEEeccCceEEEEcccCcchheeeccccc-c-cccceecccccCCCCccceEEEeCCCcE
Confidence 32 345689999999999999988866999999998776 333332211 1 2256678889998 6677777789999
Q ss_pred EEEeCCCCeeEEEe-eccccCeEEEEEeCCCC-EEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccc
Q psy12614 227 RFWDGKTGVQWSDV-KTHKKDILALTVSEDEN-YLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGD 304 (708)
Q Consensus 227 ~~wd~~~~~~~~~~-~~~~~~i~~~~~s~~~~-~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 304 (708)
..||+++..+...+ .+|...|..+.|+|+.+ +|++++.||.|++||.+. -+ .+...+.+|.+.
T Consensus 196 ~~~D~RT~~~~~sI~dAHgq~vrdlDfNpnkq~~lvt~gDdgyvriWD~R~--------tk-------~pv~el~~HsHW 260 (370)
T KOG1007|consen 196 QFWDLRTMKKNNSIEDAHGQRVRDLDFNPNKQHILVTCGDDGYVRIWDTRK--------TK-------FPVQELPGHSHW 260 (370)
T ss_pred EEEEccchhhhcchhhhhcceeeeccCCCCceEEEEEcCCCccEEEEeccC--------CC-------ccccccCCCceE
Confidence 99999988776655 46888999999999875 577899999999999987 22 267889999999
Q ss_pred eEEEEEe---CCEEEEEcCCCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEEEcCCeEEEEEecCCCCCCCCCCC
Q psy12614 305 VKSLALH---GNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHS 381 (708)
Q Consensus 305 v~~l~~~---~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~ 381 (708)
|.++.|+ ..++++++.|..|.+|....-.-.. .|. ++....+ .++.+
T Consensus 261 vW~VRfn~~hdqLiLs~~SDs~V~Lsca~svSSE~--------------------------qi~-~~~dese---~e~~d 310 (370)
T KOG1007|consen 261 VWAVRFNPEHDQLILSGGSDSAVNLSCASSVSSEQ--------------------------QIE-FEDDESE---SEDED 310 (370)
T ss_pred EEEEEecCccceEEEecCCCceeEEEecccccccc--------------------------ccc-ccccccc---Ccchh
Confidence 9999999 8899999999999998764321000 000 0000000 00000
Q ss_pred -CCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEE--EcCCceEEEEEE
Q psy12614 382 -NTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAY--STESCVRLHSLD 432 (708)
Q Consensus 382 -~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~--~~d~~i~i~~~~ 432 (708)
..+. .+-+..+++....|.+.|.+++||.-..++.+ +.||.+.|=.+.
T Consensus 311 seer~---kpL~dg~l~tydehEDSVY~~aWSsadPWiFASLSYDGRviIs~V~ 361 (370)
T KOG1007|consen 311 SEERV---KPLQDGQLETYDEHEDSVYALAWSSADPWIFASLSYDGRVIISSVP 361 (370)
T ss_pred hHHhc---ccccccccccccccccceEEEeeccCCCeeEEEeccCceEEeecCC
Confidence 0000 00112344556688999999999998888876 569998876654
|
|
| >KOG0322|consensus | Back alignment and domain information |
|---|
Probab=99.80 E-value=2.5e-18 Score=147.55 Aligned_cols=285 Identities=15% Similarity=0.142 Sum_probs=189.0
Q ss_pred EEecCCCCCcEEEEEEe-CCEEEEEcCCCcEEEEECCCCeEeEEEe-ecCCceEEEEEecCCCEEEEEeCCCcEEEEEcc
Q psy12614 64 VFIGDPLSNSIECLTWF-NDRLFSGGLQGFVNEYDMRRLNIKSSTA-VTSGTCWCLSVHKKKRLLAAGTEQGHINLFQIS 141 (708)
Q Consensus 64 ~~~~h~~~~~v~~l~~~-~~~l~s~~~d~~i~vwd~~~~~~~~~~~-~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~ 141 (708)
.+.+|. +.|+++.|. ..+|.+|...|.+++|++++.+.+..+. .+...|+.+.--|+ ..|.+-+.|+.+.+|++.
T Consensus 9 vLRp~~--~~v~s~~fqa~~rL~sg~~~G~V~~w~lqt~r~~~~~r~~g~~~it~lq~~p~-d~l~tqgRd~~L~lw~ia 85 (323)
T KOG0322|consen 9 VLRPHS--SSVTSVLFQANERLMSGLSVGIVKMWVLQTERDLPLIRLFGRLFITNLQSIPN-DSLDTQGRDPLLILWTIA 85 (323)
T ss_pred Eecccc--chheehhhccchhhhcccccceEEEEEeecCccchhhhhhccceeeceeecCC-cchhhcCCCceEEEEEcc
Confidence 667888 999999999 8889999999999999999999998888 66778999999887 457788999999999999
Q ss_pred CCcEEEEEecccccccEEEEEECC-----CC----CEEEEecCC--eEEEEEcCCCceEEEEEecccCCCCCceeEEEEE
Q psy12614 142 DEGLLYEKLLDRQQGRILCTAWHS-----SG----DYLVTGCAA--AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVA 210 (708)
Q Consensus 142 ~~~~~~~~~~~~~~~~v~~~~~s~-----d~----~~l~~~~~d--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 210 (708)
.+..+.... -.+.++.|.+ .+ +.++.-++. .+.+-|.-....+........ ...+.+.+..
T Consensus 86 ~s~~i~i~S-----i~~nslgFCrfSl~~~~k~~eqll~yp~rgsde~h~~D~g~~tqv~i~dd~~~---~Klgsvmc~~ 157 (323)
T KOG0322|consen 86 YSAFISIHS-----IVVNSLGFCRFSLVKKPKNSEQLLEYPSRGSDETHKQDGGDTTQVQIADDSER---SKLGSVMCQD 157 (323)
T ss_pred CcceEEEee-----eeccccccccceeccCCCcchhheecCCcccchhhhhccCccceeEccCchhc---cccCceeeee
Confidence 876653333 2344444432 22 223333333 233333222222222221111 2356666666
Q ss_pred Ecc-CC-E--EEEEcCCCcEEEEeCCCCee----------EEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCC
Q psy12614 211 FCA-DF-T--IITGDSGGFVRFWDGKTGVQ----------WSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRK 276 (708)
Q Consensus 211 ~~~-~~-~--l~~~~~dg~i~~wd~~~~~~----------~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~ 276 (708)
+.- ++ + +++|.++|.+.+||+.++.. ......|..+|.++.|.+.-..=++|+.+..+..|+++..
T Consensus 158 ~~~~c~s~~lllaGyEsghvv~wd~S~~~~~~~~~~~~kv~~~~ash~qpvlsldyas~~~rGisgga~dkl~~~Sl~~s 237 (323)
T KOG0322|consen 158 KDHACGSTFLLLAGYESGHVVIWDLSTGDKIIQLPQSSKVESPNASHKQPVLSLDYASSCDRGISGGADDKLVMYSLNHS 237 (323)
T ss_pred ccccccceEEEEEeccCCeEEEEEccCCceeeccccccccccchhhccCcceeeeechhhcCCcCCCccccceeeeeccc
Confidence 433 33 3 67889999999999998843 3334578999999999987777788888889999998761
Q ss_pred cccccCCCCCCCCcceEEeEEEeccccceEEEEEeCCEEEEEcCCCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEE
Q psy12614 277 PQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALHGNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHV 356 (708)
Q Consensus 277 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l 356 (708)
...+.-. ..... ..++...+.+-||++++
T Consensus 238 ~gslq~~------------~e~~l---------------------------------------knpGv~gvrIRpD~KIl 266 (323)
T KOG0322|consen 238 TGSLQIR------------KEITL---------------------------------------KNPGVSGVRIRPDGKIL 266 (323)
T ss_pred cCccccc------------ceEEe---------------------------------------cCCCccceEEccCCcEE
Confidence 1111000 01111 12333444455555555
Q ss_pred EE-EcCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEEEc-CCceEEEEE
Q psy12614 357 LL-QYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYST-ESCVRLHSL 431 (708)
Q Consensus 357 ~~-~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~-d~~i~i~~~ 431 (708)
++ +.|++|++|...+.. .+.+...|...|.+++|+|+...+|.++ |++|.+|++
T Consensus 267 ATAGWD~RiRVyswrtl~---------------------pLAVLkyHsagvn~vAfspd~~lmAaaskD~rISLWkL 322 (323)
T KOG0322|consen 267 ATAGWDHRIRVYSWRTLN---------------------PLAVLKYHSAGVNAVAFSPDCELMAAASKDARISLWKL 322 (323)
T ss_pred eecccCCcEEEEEeccCC---------------------chhhhhhhhcceeEEEeCCCCchhhhccCCceEEeeec
Confidence 54 355555555555433 3344456788999999999988888754 999999986
|
|
| >KOG1007|consensus | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.2e-17 Score=145.12 Aligned_cols=276 Identities=15% Similarity=0.203 Sum_probs=202.1
Q ss_pred CCCcEEEEeCCC--CCeEEEEEecCCCCCcEEEEEEe---CCEEEEEcCC-------CcEEEEECCCC---------eEe
Q psy12614 46 ADQSIEIWDISE--TPHVDRVFIGDPLSNSIECLTWF---NDRLFSGGLQ-------GFVNEYDMRRL---------NIK 104 (708)
Q Consensus 46 ~dg~v~iwd~~~--~~~~~~~~~~h~~~~~v~~l~~~---~~~l~s~~~d-------~~i~vwd~~~~---------~~~ 104 (708)
.|+.|.+-++.. +....+.|.-|. +.|..++-+ ...|+++..+ -.+.||.+... +++
T Consensus 38 ~dNqVhll~~d~e~s~l~skvf~h~a--gEvw~las~P~d~~ilaT~yn~~s~s~vl~~aaiw~ipe~~~~S~~~tlE~v 115 (370)
T KOG1007|consen 38 EDNQVHLLRLDSEGSELLSKVFFHHA--GEVWDLASSPFDQRILATVYNDTSDSGVLTGAAIWQIPEPLGQSNSSTLECV 115 (370)
T ss_pred CcceeEEEEecCccchhhhhhhhcCC--cceehhhcCCCCCceEEEEEeccCCCcceeeEEEEecccccCccccchhhHh
Confidence 356777776654 445555666666 899999888 5556655432 24789987653 234
Q ss_pred EEEe-ecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEe----cccccccEEEEEECC--CCCEEEEecCCe
Q psy12614 105 SSTA-VTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKL----LDRQQGRILCTAWHS--SGDYLVTGCAAA 177 (708)
Q Consensus 105 ~~~~-~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~----~~~~~~~v~~~~~s~--d~~~l~~~~~d~ 177 (708)
..+. .+-+.|.|+.|.|++..+|+-. |..|.+|+++.+..+.... -..+....++-+|+| ||+.+++.+..+
T Consensus 116 ~~Ldteavg~i~cvew~Pns~klasm~-dn~i~l~~l~ess~~vaev~ss~s~e~~~~ftsg~WspHHdgnqv~tt~d~t 194 (370)
T KOG1007|consen 116 ASLDTEAVGKINCVEWEPNSDKLASMD-DNNIVLWSLDESSKIVAEVLSSESAEMRHSFTSGAWSPHHDGNQVATTSDST 194 (370)
T ss_pred hcCCHHHhCceeeEEEcCCCCeeEEec-cCceEEEEcccCcchheeecccccccccceecccccCCCCccceEEEeCCCc
Confidence 4444 4557999999999999999865 7889999998765421111 112456678889998 789999888779
Q ss_pred EEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE--EEEEcCCCcEEEEeCCCC-eeEEEeeccccCeEEEEEeC
Q psy12614 178 VRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT--IITGDSGGFVRFWDGKTG-VQWSDVKTHKKDILALTVSE 254 (708)
Q Consensus 178 i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--l~~~~~dg~i~~wd~~~~-~~~~~~~~~~~~i~~~~~s~ 254 (708)
+..||+++.++...+...+ ...+..+.|+|+-+ |++++.||.|++||.+.- .++..+.+|...|.++.|+|
T Consensus 195 l~~~D~RT~~~~~sI~dAH------gq~vrdlDfNpnkq~~lvt~gDdgyvriWD~R~tk~pv~el~~HsHWvW~VRfn~ 268 (370)
T KOG1007|consen 195 LQFWDLRTMKKNNSIEDAH------GQRVRDLDFNPNKQHILVTCGDDGYVRIWDTRKTKFPVQELPGHSHWVWAVRFNP 268 (370)
T ss_pred EEEEEccchhhhcchhhhh------cceeeeccCCCCceEEEEEcCCCccEEEEeccCCCccccccCCCceEEEEEEecC
Confidence 9999999988888776543 77899999999985 899999999999999864 56889999999999999999
Q ss_pred CC-CEEEEEecCCeEEEEEccCCc---ccccCCCC---C---C-CCcce---EEeEEEeccccceEEEEEe---CCEEEE
Q psy12614 255 DE-NYLYCAGVDPTVVCFQRTRKP---QVCSTSGP---E---Q-GSSVW---VRSVNRVIHEGDVKSLALH---GNRLYS 317 (708)
Q Consensus 255 ~~-~~l~~~~~dg~i~iw~~~~~~---~~~~~~g~---~---~-~~~~~---~~~~~~~~~~~~v~~l~~~---~~~l~s 317 (708)
.. +++++++.|..+.+|....-+ ++...... + . ++.+. -.+..+..|...|.+++|+ .=.+++
T Consensus 269 ~hdqLiLs~~SDs~V~Lsca~svSSE~qi~~~~dese~e~~dseer~kpL~dg~l~tydehEDSVY~~aWSsadPWiFAS 348 (370)
T KOG1007|consen 269 EHDQLILSGGSDSAVNLSCASSVSSEQQIEFEDDESESEDEDSEERVKPLQDGQLETYDEHEDSVYALAWSSADPWIFAS 348 (370)
T ss_pred ccceEEEecCCCceeEEEeccccccccccccccccccCcchhhHHhcccccccccccccccccceEEEeeccCCCeeEEE
Confidence 65 677899999999999776511 11100000 0 0 00011 1244678899999999999 456788
Q ss_pred EcCCCeEEEEeCC
Q psy12614 318 GGLDSYLSLSYYP 330 (708)
Q Consensus 318 ~~~d~~i~iw~~~ 330 (708)
-+.||.+.|-.+.
T Consensus 349 LSYDGRviIs~V~ 361 (370)
T KOG1007|consen 349 LSYDGRVIISSVP 361 (370)
T ss_pred eccCceEEeecCC
Confidence 8999999886654
|
|
| >KOG0644|consensus | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.4e-19 Score=179.24 Aligned_cols=241 Identities=13% Similarity=0.212 Sum_probs=189.3
Q ss_pred eccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEEC
Q psy12614 21 FYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDM 98 (708)
Q Consensus 21 ~~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~ 98 (708)
-+.+|..+|.|+.|...|.++++|+.|..|+||...++.++. ...||. +.|+.++.+ .-.+++++.|..|++|.+
T Consensus 185 rLlgH~naVyca~fDrtg~~Iitgsdd~lvKiwS~et~~~lA-s~rGhs--~ditdlavs~~n~~iaaaS~D~vIrvWrl 261 (1113)
T KOG0644|consen 185 RLLGHRNAVYCAIFDRTGRYIITGSDDRLVKIWSMETARCLA-SCRGHS--GDITDLAVSSNNTMIAAASNDKVIRVWRL 261 (1113)
T ss_pred HHHhhhhheeeeeeccccceEeecCccceeeeeeccchhhhc-cCCCCc--cccchhccchhhhhhhhcccCceEEEEec
Confidence 478999999999999999999999999999999999999887 999999 999999999 667889999999999999
Q ss_pred CCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEE-Eeccc-ccccEE-----------------
Q psy12614 99 RRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYE-KLLDR-QQGRIL----------------- 159 (708)
Q Consensus 99 ~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~-~~~~~-~~~~v~----------------- 159 (708)
..+.++..+.+|.+.|++++|+|- ++.+.||++++||..-.-..+. ..+.. ....+.
T Consensus 262 ~~~~pvsvLrghtgavtaiafsP~----~sss~dgt~~~wd~r~~~~~y~prp~~~~~~~~~~s~~~~~~~~~f~Tgs~d 337 (1113)
T KOG0644|consen 262 PDGAPVSVLRGHTGAVTAIAFSPR----ASSSDDGTCRIWDARLEPRIYVPRPLKFTEKDLVDSILFENNGDRFLTGSRD 337 (1113)
T ss_pred CCCchHHHHhccccceeeeccCcc----ccCCCCCceEeccccccccccCCCCCCcccccceeeeeccccccccccccCC
Confidence 999999999999999999999995 3778899999999871111100 00000 001111
Q ss_pred ---------EEEECCCC-----------CEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCC-E-
Q psy12614 160 ---------CTAWHSSG-----------DYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADF-T- 216 (708)
Q Consensus 160 ---------~~~~s~d~-----------~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~- 216 (708)
.++|.... .+.+++-.+ .+.+|++.+|...+.+. ++...+..+.++|-+ +
T Consensus 338 ~ea~n~e~~~l~~~~~~lif~t~ssd~~~~~~~ar~~~~~~vwnl~~g~l~H~l~-------ghsd~~yvLd~Hpfn~ri 410 (1113)
T KOG0644|consen 338 GEARNHEFEQLAWRSNLLIFVTRSSDLSSIVVTARNDHRLCVWNLYTGQLLHNLM-------GHSDEVYVLDVHPFNPRI 410 (1113)
T ss_pred cccccchhhHhhhhccceEEEeccccccccceeeeeeeEeeeeecccchhhhhhc-------ccccceeeeeecCCCcHh
Confidence 11221111 122333334 67889988888777665 448889999999966 3
Q ss_pred EEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccC
Q psy12614 217 IITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTR 275 (708)
Q Consensus 217 l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~ 275 (708)
..+++.||...|||+-.|.+++........+..-+||+||..++....-|.++|.....
T Consensus 411 ~msag~dgst~iwdi~eg~pik~y~~gh~kl~d~kFSqdgts~~lsd~hgql~i~g~gq 469 (1113)
T KOG0644|consen 411 AMSAGYDGSTIIWDIWEGIPIKHYFIGHGKLVDGKFSQDGTSIALSDDHGQLYILGTGQ 469 (1113)
T ss_pred hhhccCCCceEeeecccCCcceeeecccceeeccccCCCCceEecCCCCCceEEeccCC
Confidence 56899999999999999988776654456677889999999999998889999987765
|
|
| >KOG1524|consensus | Back alignment and domain information |
|---|
Probab=99.79 E-value=5.3e-16 Score=146.50 Aligned_cols=474 Identities=11% Similarity=0.093 Sum_probs=275.3
Q ss_pred CcEEEEEEe-CCEEEEEcCCCcEEEEECCCCeEeEEEeecCCceEE-EEEec-------CCCEEEEEeCCCcEEEEEccC
Q psy12614 72 NSIECLTWF-NDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWC-LSVHK-------KKRLLAAGTEQGHINLFQISD 142 (708)
Q Consensus 72 ~~v~~l~~~-~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~-~~~s~-------~~~~la~~~~d~~i~iwd~~~ 142 (708)
..|.++.|+ ..-++.++.|..+.+|.--+......+.-....+.. +..-+ ....++.++.||.+.+.+- .
T Consensus 15 e~vc~v~w~~~eei~~~~dDh~~~~~~~~~~~s~~~~~~p~df~pt~~h~~~rs~~~g~~~d~~~i~s~DGkf~il~k-~ 93 (737)
T KOG1524|consen 15 EKVCCVDWSSNEEIYFVSDDHQIFKWSDVSRDSVEVAKLPDDFVPTDMHLGGRSSGGGKGSDTLLICSNDGRFVILNK-S 93 (737)
T ss_pred eeEEeecccccceEEEeccCceEEEeecccchhhhhhhCCcccCCccccccccccCCCCCcceEEEEcCCceEEEecc-c
Confidence 667788888 555556666666666653332222222211111111 11111 2346788899999988764 3
Q ss_pred CcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEEEEc
Q psy12614 143 EGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGD 221 (708)
Q Consensus 143 ~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~ 221 (708)
++.. +....|.+.+.+-.|+|||.-|++++.| .|++|. ++|-....+... ..+|+|++|.|+..-+.-+
T Consensus 94 ~rVE--~sv~AH~~A~~~gRW~~dGtgLlt~GEDG~iKiWS-rsGMLRStl~Q~-------~~~v~c~~W~p~S~~vl~c 163 (737)
T KOG1524|consen 94 ARVE--RSISAHAAAISSGRWSPDGAGLLTAGEDGVIKIWS-RSGMLRSTVVQN-------EESIRCARWAPNSNSIVFC 163 (737)
T ss_pred chhh--hhhhhhhhhhhhcccCCCCceeeeecCCceEEEEe-ccchHHHHHhhc-------CceeEEEEECCCCCceEEe
Confidence 4444 7788999999999999999999999999 999999 456555444433 7889999999998633334
Q ss_pred CCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEecc
Q psy12614 222 SGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIH 301 (708)
Q Consensus 222 ~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 301 (708)
..+.+.+=.+.....+-..+.|.+-|.++.|++..+.+++|+.|-..++||... . .+..-..|
T Consensus 164 ~g~h~~IKpL~~n~k~i~WkAHDGiiL~~~W~~~s~lI~sgGED~kfKvWD~~G---------~--------~Lf~S~~~ 226 (737)
T KOG1524|consen 164 QGGHISIKPLAANSKIIRWRAHDGLVLSLSWSTQSNIIASGGEDFRFKIWDAQG---------A--------NLFTSAAE 226 (737)
T ss_pred cCCeEEEeecccccceeEEeccCcEEEEeecCccccceeecCCceeEEeecccC---------c--------ccccCChh
Confidence 456788877777777788899999999999999999999999999999999875 2 45666788
Q ss_pred ccceEEEEEeCCEEEEEcCCCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEEE-cCCeEEEEEecCCCCCCCCCC
Q psy12614 302 EGDVKSLALHGNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQ-YTSHLELWSLGSAQSTDLSSH 380 (708)
Q Consensus 302 ~~~v~~l~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~-~~~~i~i~~~~~~~~~~~~~~ 380 (708)
..+|++++|..+.++..+.-.++|+=.. ..+....+++|+||..++++ ..|.+.+=..-..+. ...
T Consensus 227 ey~ITSva~npd~~~~v~S~nt~R~~~p----------~~GSifnlsWS~DGTQ~a~gt~~G~v~~A~~ieq~l---~~~ 293 (737)
T KOG1524|consen 227 EYAITSVAFNPEKDYLLWSYNTARFSSP----------RVGSIFNLSWSADGTQATCGTSTGQLIVAYAIEQQL---VSG 293 (737)
T ss_pred ccceeeeeeccccceeeeeeeeeeecCC----------CccceEEEEEcCCCceeeccccCceEEEeeeehhhh---hhc
Confidence 9999999999434444444455553211 24455678999999999985 445443222111110 000
Q ss_pred CCCCcccCCCCceEEEEEE---------ecCCCceEEEEeCCCCcEEEEEcCCceEEEEEEecCCcceeEEeecCCcccc
Q psy12614 381 SNTTGVPLLSFPRLIVKMS---------AVNNATIRCSVVSNDGKYVAYSTESCVRLHSLDLDGDKPQISRIKNLPAPLF 451 (708)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~---------~~~~~~i~~~~~s~~g~~l~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~ 451 (708)
..+. ...+.+...+. .....++...+++ -.+|+++....+++|.-..-.-+..+ .+...
T Consensus 294 n~~~----t~~~r~~I~vrdV~~~v~d~LE~p~rv~k~sL~--Y~hLvvaTs~qvyiys~knwntpiii------dgre~ 361 (737)
T KOG1524|consen 294 NLKA----TSKSRKSITVRDVATGVQDILEFPQRVVKFSLG--YGHLVVATSLQVYIYSEKNWNTPIII------DGRED 361 (737)
T ss_pred ccee----EeeccceEEeehhhhhHHHHhhCccceeeeeec--eeEEEEEeccEEEEEecCCccCcEEE------ecccc
Confidence 0000 00000111111 1234455555543 24566666667777765432111111 11111
Q ss_pred ccee----EEEEEecCCCeEEEEecCCc-EEEecCCCeEEEEEecCCCCCccCcceEEEEECCCCcEEEEEe--cCCeEE
Q psy12614 452 KSIF----THVLISADSTLLLAVSLNGP-LYIIDLSSLEIKYCVDPYKSNLMSDVISLVQMSECKQYIVCAD--RKSHVV 524 (708)
Q Consensus 452 ~~~i----~~~~~s~d~~~l~~~~~dg~-i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~--~d~~i~ 524 (708)
...+ ...-.-.||..+-....+|+ .|+.....+ . .+..+.-..|-....|+.-+ ....+.
T Consensus 362 tr~lieq~ek~fli~dgsSi~lytyegR~~~np~~Pg~-~------------~dlL~~rtlsLandtLaird~ad~kvlh 428 (737)
T KOG1524|consen 362 TRNLIEQGEKYFLILDGSSIWLYTYEGRLHLNPRYPGS-Q------------IDLLTWRTLSLANDTLAIRDNADPKVLH 428 (737)
T ss_pred chhHhhhhhhheEEecCcEEEEEEecCceecCCCCCCc-c------------cccccceeeecccceEEeecCCCCeeEE
Confidence 0000 00111123333333444444 443332211 0 01111111222233455433 334677
Q ss_pred EEEC-Cceee----ecCCCCCCceEEEEcC----CCCEEEEEecCCcEEEEEcCCCCCCchhhhhhccCchhhhcCCCCe
Q psy12614 525 IWKN-GQHHA----SLPRYRKPSTAMAIHP----TLSTLVTVYSDHRIVEFDLNRKAFTTFSRKLETNHPNEWLSRQLPV 595 (708)
Q Consensus 525 iw~~-~~~~~----~~~~~~~~v~~l~~s~----d~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i 595 (708)
++|. .++.. .+-.|...|..++... +.+.++..+.++.++|=.+..-... .+...-..-|
T Consensus 429 lFd~istgk~qgDgk~L~hk~~IveIAldqkG~tnDrkVAFiDknrdl~ItsvKrfgke-----------e~I~KiGTmV 497 (737)
T KOG1524|consen 429 LFDLISTGKRQGDGKSLRHKQQIVEIALDQKGLTNDRKVAFIDKNRDLFITSVKRFGKE-----------EEIYKIGTMV 497 (737)
T ss_pred eccCCCCCcccCCccccchhhhHHHhHhhccCCCccceEEEEecCCcEEEEeehhcCch-----------hhhhhhhhhh
Confidence 8887 43333 3344566666666643 5567777888888887766542211 1222233457
Q ss_pred eEEEeCCCCCceEEEEcCeeEEEEecCC
Q psy12614 596 LGIEFDPQDSSLIYLMDDSALCVINKNK 623 (708)
Q Consensus 596 ~~l~~s~~~~~l~~~~~d~~i~~wd~~~ 623 (708)
..++|+..-+ ++.+-.|+.+.||-...
T Consensus 498 htLawndttN-iLcglqDt~fsVWy~pn 524 (737)
T KOG1524|consen 498 HTLAWNDTTN-ILCGLQDTCFSVWYYPN 524 (737)
T ss_pred hhhhhccccc-eeeeeccceEEEEEcCC
Confidence 7788986555 56777899999998753
|
|
| >KOG1912|consensus | Back alignment and domain information |
|---|
Probab=99.79 E-value=5e-16 Score=153.18 Aligned_cols=410 Identities=12% Similarity=0.073 Sum_probs=260.8
Q ss_pred eeeeeeeeccCCCCcEEEEEEcCC------------CCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe-
Q psy12614 14 YGVHNIKFYAPEPKVINCIACEPK------------SSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF- 80 (708)
Q Consensus 14 ~~~~~~~~~~~h~~~v~~~~~s~~------------~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~- 80 (708)
+.++.++.+.-|+..|+.+.|.|- .-+||++...|.|.+||...+..+. .+..|. .+|..++|-
T Consensus 43 ~s~q~iqsie~h~s~V~~VrWap~~~p~~llS~~~~~lliAsaD~~GrIil~d~~~~s~~~-~l~~~~--~~~qdl~W~~ 119 (1062)
T KOG1912|consen 43 RSLQLIQSIELHQSAVTSVRWAPAPSPRDLLSPSSSQLLIASADISGRIILVDFVLASVIN-WLSHSN--DSVQDLCWVP 119 (1062)
T ss_pred hhhhhhhccccCccceeEEEeccCCCchhccCccccceeEEeccccCcEEEEEehhhhhhh-hhcCCC--cchhheeeee
Confidence 345566678889999999999873 2367888889999999999987765 777777 999999998
Q ss_pred -----CCEEEEEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEec-CCCEEEEEeCCCcEEEEEccC-------CcEEE
Q psy12614 81 -----NDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHK-KKRLLAAGTEQGHINLFQISD-------EGLLY 147 (708)
Q Consensus 81 -----~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~-~~~~la~~~~d~~i~iwd~~~-------~~~~~ 147 (708)
.+.|++.....+|.+||..+|+.............|+.+.| |.+.+..-+..|.+.+-+.-. ++..
T Consensus 120 ~rd~Srd~LlaIh~ss~lvLwntdtG~k~Wk~~ys~~iLs~f~~DPfd~rh~~~l~s~g~vl~~~~l~~sep~~pgk~~- 198 (1062)
T KOG1912|consen 120 ARDDSRDVLLAIHGSSTLVLWNTDTGEKFWKYDYSHEILSCFRVDPFDSRHFCVLGSKGFVLSCKDLGLSEPDVPGKEF- 198 (1062)
T ss_pred ccCcchheeEEecCCcEEEEEEccCCceeeccccCCcceeeeeeCCCCcceEEEEccCceEEEEeccCCCCCCCCceeE-
Confidence 36788888999999999999999998887777888899998 555666666667666655431 1111
Q ss_pred EEecccccc-------------------------cEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCC
Q psy12614 148 EKLLDRQQG-------------------------RILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFS 201 (708)
Q Consensus 148 ~~~~~~~~~-------------------------~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~ 201 (708)
+.-..|.. ....++|+|.-+.++..... .+.++|++-..++.....+
T Consensus 199 -qI~sd~Sdl~~lere~at~ns~ts~~~sa~fity~a~faf~p~~rn~lfi~~prellv~dle~~~~l~vvpie------ 271 (1062)
T KOG1912|consen 199 -QITSDHSDLAHLERETATGNSTTSTPASAYFITYCAQFAFSPHWRNILFITFPRELLVFDLEYECCLAVVPIE------ 271 (1062)
T ss_pred -EEecCccchhhhhhhhhccccccCCCcchhHHHHHHhhhcChhhhceEEEEeccceEEEcchhhceeEEEEec------
Confidence 11111111 01124667776555555555 8999999999999988877
Q ss_pred CceeEEEEEEccCCE---EEEEcCCCcEEEEeCCCC----------------eeEEEeec-cccCeEEEEEeCC-CCEEE
Q psy12614 202 KNTAVWCVAFCADFT---IITGDSGGFVRFWDGKTG----------------VQWSDVKT-HKKDILALTVSED-ENYLY 260 (708)
Q Consensus 202 ~~~~v~~~~~~~~~~---l~~~~~dg~i~~wd~~~~----------------~~~~~~~~-~~~~i~~~~~s~~-~~~l~ 260 (708)
.+.+.-+.+.|+++ ++++..||.+.+|--+.- .+...+.. .+..+......|. .+.++
T Consensus 272 -r~~akfv~vlP~~~rd~LfclH~nG~ltirvrk~~~~~f~~~~~~l~~dl~~Q~~~vr~m~~~rp~~~~~cPs~~sa~a 350 (1062)
T KOG1912|consen 272 -RGGAKFVDVLPDPRRDALFCLHSNGRLTIRVRKEEPTEFKKPNASLSMDLGEQVHVVRPMEEFRPVIGASCPSTPSALA 350 (1062)
T ss_pred -cCCcceeEeccCCCcceEEEEecCCeEEEEEeeccCccccccchhhccccccceEEEeechhcccceeecCCCChhhhh
Confidence 45566677888873 889999999999975431 11111110 1111222333443 33444
Q ss_pred EEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe-------CCEEEEEcCCCeEEEEeCCCC-
Q psy12614 261 CAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH-------GNRLYSGGLDSYLSLSYYPPK- 332 (708)
Q Consensus 261 ~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~-------~~~l~s~~~d~~i~iw~~~~~- 332 (708)
.--.+|...+|++.+ |.. ......+...-+..+.|. ...|..-+.||. ...+
T Consensus 351 vl~s~g~~~~w~l~~--------~ri-------~~~~~s~~iel~~pf~f~~~~~~v~k~~l~~LS~dg~-----h~sGs 410 (1062)
T KOG1912|consen 351 VLYSSGDSTFWQLSN--------GRI-------HLDYRSSSIELVLPFDFNLSTKLVGKTSLISLSDDGS-----HSSGS 410 (1062)
T ss_pred hhhhcchhHHHhhhc--------CCc-------CcccccccccccccccccCceeehhhccccchhhcCC-----CCCCc
Confidence 445678899999986 430 000000111112222222 344555566661 1111
Q ss_pred ceeecCccCCCCceEEEEcCCc-------EEEEE-cCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCC
Q psy12614 333 TLVKYPCTLAQSTPVSLAKDIQ-------HVLLQ-YTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNA 404 (708)
Q Consensus 333 ~~~~~~~~~~~~~~~~~s~~~~-------~l~~~-~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (708)
.+.+.. +.++.......|.++ +++.+ ..|+|.++|+.++. +...+.-|..
T Consensus 411 ~~~~~~-p~p~~t~~~~~p~~n~~~~~~pLvAvGT~sGTV~vvdvst~~---------------------v~~~fsvht~ 468 (1062)
T KOG1912|consen 411 TCVRMR-PMPELTKVENDPGGNTPAGTVPLVAVGTNSGTVDVVDVSTNA---------------------VAASFSVHTS 468 (1062)
T ss_pred eeeecc-cCcccceeecCCCCCccceeeeeEEeecCCceEEEEEecchh---------------------hhhhhccccc
Confidence 122222 334433344444333 34454 78999999998865 4444556788
Q ss_pred ceEEEEeCCCCcEEEEEc----------CCceEEEEEEecCCcceeEEeecCCcccccceeEEEEEecCCCeEEEEecCC
Q psy12614 405 TIRCSVVSNDGKYVAYST----------ESCVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVLISADSTLLLAVSLNG 474 (708)
Q Consensus 405 ~i~~~~~s~~g~~l~~~~----------d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~~~~~dg 474 (708)
.|.++.|.....++-.+. -+.+.+-|+.++-.+ .++. +++.. ..+|+.+..|.-|+||+....+.
T Consensus 469 ~VkgleW~g~sslvSfsys~~n~~sg~vrN~l~vtdLrtGlsk-~fR~---l~~~d-espI~~irvS~~~~yLai~Fr~~ 543 (1062)
T KOG1912|consen 469 LVKGLEWLGNSSLVSFSYSHVNSASGGVRNDLVVTDLRTGLSK-RFRG---LQKPD-ESPIRAIRVSSSGRYLAILFRRE 543 (1062)
T ss_pred ceeeeeeccceeEEEeeeccccccccceeeeEEEEEccccccc-cccc---CCCCC-cCcceeeeecccCceEEEEeccc
Confidence 888998887776665432 134667777763322 2221 22222 55788899999999999999888
Q ss_pred c--EEEecCC
Q psy12614 475 P--LYIIDLS 482 (708)
Q Consensus 475 ~--i~~~~~~ 482 (708)
- +|++.+.
T Consensus 544 plEiwd~kt~ 553 (1062)
T KOG1912|consen 544 PLEIWDLKTL 553 (1062)
T ss_pred chHHHhhccc
Confidence 7 9998655
|
|
| >KOG0649|consensus | Back alignment and domain information |
|---|
Probab=99.79 E-value=2.7e-16 Score=133.48 Aligned_cols=236 Identities=20% Similarity=0.262 Sum_probs=176.0
Q ss_pred cEEEEEEe--CCEEEEEcCCCcEEEEECCCC----------eEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEc
Q psy12614 73 SIECLTWF--NDRLFSGGLQGFVNEYDMRRL----------NIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQI 140 (708)
Q Consensus 73 ~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~----------~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~ 140 (708)
.|.+-+++ +++|++|..+|+|.+..+++. ..+...++|.++|+.++|.. .+|++|+ ||.|+=|.+
T Consensus 12 tvf~qa~sp~~~~l~agn~~G~iav~sl~sl~s~sa~~~gk~~iv~eqahdgpiy~~~f~d--~~Lls~g-dG~V~gw~W 88 (325)
T KOG0649|consen 12 TVFAQAISPSKQYLFAGNLFGDIAVLSLKSLDSGSAEPPGKLKIVPEQAHDGPIYYLAFHD--DFLLSGG-DGLVYGWEW 88 (325)
T ss_pred HHHHHhhCCcceEEEEecCCCeEEEEEehhhhccccCCCCCcceeeccccCCCeeeeeeeh--hheeecc-CceEEEeee
Confidence 34445666 889999999999999987652 24556689999999999983 4666655 599999988
Q ss_pred cCCcE------EEEEeccccc-----ccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEE
Q psy12614 141 SDEGL------LYEKLLDRQQ-----GRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWC 208 (708)
Q Consensus 141 ~~~~~------~~~~~~~~~~-----~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~ 208 (708)
..... ........|. ..|+++...|..+.++.++.| .++.||+++|+..+.+. +|.+.+.+
T Consensus 89 ~E~~es~~~K~lwe~~~P~~~~~~evPeINam~ldP~enSi~~AgGD~~~y~~dlE~G~i~r~~r-------GHtDYvH~ 161 (325)
T KOG0649|consen 89 NEEEESLATKRLWEVKIPMQVDAVEVPEINAMWLDPSENSILFAGGDGVIYQVDLEDGRIQREYR-------GHTDYVHS 161 (325)
T ss_pred hhhhhhccchhhhhhcCccccCcccCCccceeEeccCCCcEEEecCCeEEEEEEecCCEEEEEEc-------CCcceeee
Confidence 64321 1111122222 358899999988888888888 99999999999999887 55899999
Q ss_pred EEE-ccCCEEEEEcCCCcEEEEeCCCCeeEEEeec---------c-ccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCc
Q psy12614 209 VAF-CADFTIITGDSGGFVRFWDGKTGVQWSDVKT---------H-KKDILALTVSEDENYLYCAGVDPTVVCFQRTRKP 277 (708)
Q Consensus 209 ~~~-~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~---------~-~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~ 277 (708)
+.- +.++++++|+.||++++||.++++.+..+.. | ...|.+++.+ ..+|++|+ ...+.+|.++.
T Consensus 162 vv~R~~~~qilsG~EDGtvRvWd~kt~k~v~~ie~yk~~~~lRp~~g~wigala~~--edWlvCGg-Gp~lslwhLrs-- 236 (325)
T KOG0649|consen 162 VVGRNANGQILSGAEDGTVRVWDTKTQKHVSMIEPYKNPNLLRPDWGKWIGALAVN--EDWLVCGG-GPKLSLWHLRS-- 236 (325)
T ss_pred eeecccCcceeecCCCccEEEEeccccceeEEeccccChhhcCcccCceeEEEecc--CceEEecC-CCceeEEeccC--
Confidence 988 6677899999999999999999998887642 1 2345566554 45888776 46899999998
Q ss_pred ccccCCCCCCCCcceEEeEEEeccccceEEEEEeCCEEEEEcCCCeEEEEeCCCCceeecC
Q psy12614 278 QVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALHGNRLYSGGLDSYLSLSYYPPKTLVKYP 338 (708)
Q Consensus 278 ~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~ 338 (708)
.+ ... ...-...+..+.|..+.+++++..+.+.-|.+..-.-...+
T Consensus 237 ------se--------~t~-vfpipa~v~~v~F~~d~vl~~G~g~~v~~~~l~Gvl~a~ip 282 (325)
T KOG0649|consen 237 ------SE--------STC-VFPIPARVHLVDFVDDCVLIGGEGNHVQSYTLNGVLQANIP 282 (325)
T ss_pred ------CC--------ceE-EEecccceeEeeeecceEEEeccccceeeeeeccEEEEecc
Confidence 43 122 22334667788888899999999999999988765433333
|
|
| >PRK11028 6-phosphogluconolactonase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=6.6e-16 Score=153.12 Aligned_cols=282 Identities=11% Similarity=0.137 Sum_probs=179.2
Q ss_pred EEEcCCCcEEEEECCC-Ce--EeEEEeecCCceEEEEEecCCCEEEEEe-CCCcEEEEEcc-CCcEEEEEecccccccEE
Q psy12614 85 FSGGLQGFVNEYDMRR-LN--IKSSTAVTSGTCWCLSVHKKKRLLAAGT-EQGHINLFQIS-DEGLLYEKLLDRQQGRIL 159 (708)
Q Consensus 85 ~s~~~d~~i~vwd~~~-~~--~~~~~~~~~~~v~~~~~s~~~~~la~~~-~d~~i~iwd~~-~~~~~~~~~~~~~~~~v~ 159 (708)
++...++.|.+||+.+ ++ .+..+. +.+....++++|++++|++++ .++.|.+|++. ++.+....... ..+...
T Consensus 6 ~~~~~~~~I~~~~~~~~g~l~~~~~~~-~~~~~~~l~~spd~~~lyv~~~~~~~i~~~~~~~~g~l~~~~~~~-~~~~p~ 83 (330)
T PRK11028 6 IASPESQQIHVWNLNHEGALTLLQVVD-VPGQVQPMVISPDKRHLYVGVRPEFRVLSYRIADDGALTFAAESP-LPGSPT 83 (330)
T ss_pred EEcCCCCCEEEEEECCCCceeeeeEEe-cCCCCccEEECCCCCEEEEEECCCCcEEEEEECCCCceEEeeeec-CCCCce
Confidence 3446799999999964 33 344443 346678899999999987765 47889999997 44443222222 234567
Q ss_pred EEEECCCCCEEEEecC-C-eEEEEEcCC-CceEEEEEecccCCCCCceeEEEEEEccCCE-E-EEEcCCCcEEEEeCCCC
Q psy12614 160 CTAWHSSGDYLVTGCA-A-AVRVWDIHK-GHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-I-ITGDSGGFVRFWDGKTG 234 (708)
Q Consensus 160 ~~~~s~d~~~l~~~~~-d-~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l-~~~~~dg~i~~wd~~~~ 234 (708)
.++|+|++++|++++. + .|.+|++.+ +......... ........++++|+++ + ++...++.|.+||+.+.
T Consensus 84 ~i~~~~~g~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~-----~~~~~~~~~~~~p~g~~l~v~~~~~~~v~v~d~~~~ 158 (330)
T PRK11028 84 HISTDHQGRFLFSASYNANCVSVSPLDKDGIPVAPIQII-----EGLEGCHSANIDPDNRTLWVPCLKEDRIRLFTLSDD 158 (330)
T ss_pred EEEECCCCCEEEEEEcCCCeEEEEEECCCCCCCCceeec-----cCCCcccEeEeCCCCCEEEEeeCCCCEEEEEEECCC
Confidence 8999999999998875 4 899999964 3222111111 0123466788999995 4 45566799999999763
Q ss_pred eeEE-------EeeccccCeEEEEEeCCCCEEEEEec-CCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceE
Q psy12614 235 VQWS-------DVKTHKKDILALTVSEDENYLYCAGV-DPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVK 306 (708)
Q Consensus 235 ~~~~-------~~~~~~~~i~~~~~s~~~~~l~~~~~-dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~ 306 (708)
..+. ... .......++|+|++++++++.. ++.|.+|++.. +. ........+..+.
T Consensus 159 g~l~~~~~~~~~~~-~g~~p~~~~~~pdg~~lyv~~~~~~~v~v~~~~~--------~~----~~~~~~~~~~~~p---- 221 (330)
T PRK11028 159 GHLVAQEPAEVTTV-EGAGPRHMVFHPNQQYAYCVNELNSSVDVWQLKD--------PH----GEIECVQTLDMMP---- 221 (330)
T ss_pred CcccccCCCceecC-CCCCCceEEECCCCCEEEEEecCCCEEEEEEEeC--------CC----CCEEEEEEEecCC----
Confidence 3221 111 2344678999999999988876 89999999974 21 0000011100000
Q ss_pred EEEEeCCEEEEEcCCCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEEE--cCCeEEEEEecCCCCCCCCCCCCCC
Q psy12614 307 SLALHGNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQ--YTSHLELWSLGSAQSTDLSSHSNTT 384 (708)
Q Consensus 307 ~l~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~--~~~~i~i~~~~~~~~~~~~~~~~~~ 384 (708)
. ... .......+.++|++++++++ .++.|.+|++....
T Consensus 222 ------------------------~----~~~-~~~~~~~i~~~pdg~~lyv~~~~~~~I~v~~i~~~~----------- 261 (330)
T PRK11028 222 ------------------------A----DFS-DTRWAADIHITPDGRHLYACDRTASLISVFSVSEDG----------- 261 (330)
T ss_pred ------------------------C----cCC-CCccceeEEECCCCCEEEEecCCCCeEEEEEEeCCC-----------
Confidence 0 000 01122357889999988875 46789999986532
Q ss_pred cccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEEEc--CCceEEEEEEecCCc
Q psy12614 385 GVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYST--ESCVRLHSLDLDGDK 437 (708)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~--d~~i~i~~~~~~~~~ 437 (708)
...++...... ......++++|||++|+++. +++|.+|+++...+.
T Consensus 262 ------~~~~~~~~~~~-~~~p~~~~~~~dg~~l~va~~~~~~v~v~~~~~~~g~ 309 (330)
T PRK11028 262 ------SVLSFEGHQPT-ETQPRGFNIDHSGKYLIAAGQKSHHISVYEIDGETGL 309 (330)
T ss_pred ------CeEEEeEEEec-cccCCceEECCCCCEEEEEEccCCcEEEEEEcCCCCc
Confidence 11122222111 13455789999999999844 899999999753333
|
|
| >KOG1912|consensus | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.6e-15 Score=149.63 Aligned_cols=467 Identities=12% Similarity=0.071 Sum_probs=271.5
Q ss_pred CCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--------C------CEEEEEcCC
Q psy12614 25 EPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--------N------DRLFSGGLQ 90 (708)
Q Consensus 25 h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--------~------~~l~s~~~d 90 (708)
|+..-.++.|+|.| ++|.|+.+ .|.+-|..+-+.+. .++-|. ..|+.+.|. + -+||++...
T Consensus 14 ~~sN~~A~Dw~~~G-LiAygshs-lV~VVDs~s~q~iq-sie~h~--s~V~~VrWap~~~p~~llS~~~~~lliAsaD~~ 88 (1062)
T KOG1912|consen 14 SRSNRNAADWSPSG-LIAYGSHS-LVSVVDSRSLQLIQ-SIELHQ--SAVTSVRWAPAPSPRDLLSPSSSQLLIASADIS 88 (1062)
T ss_pred CcccccccccCccc-eEEEecCc-eEEEEehhhhhhhh-ccccCc--cceeEEEeccCCCchhccCccccceeEEecccc
Confidence 44557788899988 78888765 89999998877776 888898 999999998 1 267888899
Q ss_pred CcEEEEECCCCeEeEEEeecCCceEEEEEec---CC-CEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCC
Q psy12614 91 GFVNEYDMRRLNIKSSTAVTSGTCWCLSVHK---KK-RLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSS 166 (708)
Q Consensus 91 ~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~---~~-~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d 166 (708)
|.|.+||...+..+..+..|..++..++|-+ +. ..|++-.....+.+|+..+|+...... .......|+.+.|-
T Consensus 89 GrIil~d~~~~s~~~~l~~~~~~~qdl~W~~~rd~Srd~LlaIh~ss~lvLwntdtG~k~Wk~~--ys~~iLs~f~~DPf 166 (1062)
T KOG1912|consen 89 GRIILVDFVLASVINWLSHSNDSVQDLCWVPARDDSRDVLLAIHGSSTLVLWNTDTGEKFWKYD--YSHEILSCFRVDPF 166 (1062)
T ss_pred CcEEEEEehhhhhhhhhcCCCcchhheeeeeccCcchheeEEecCCcEEEEEEccCCceeeccc--cCCcceeeeeeCCC
Confidence 9999999999999999999999999999976 33 466777778899999999999874333 33455667888873
Q ss_pred -CCEE-EEecCCeEEEEEcC-C---Cce--EEEEEecccC--CC--------CCcee---------EEEEEEccCCE-EE
Q psy12614 167 -GDYL-VTGCAAAVRVWDIH-K---GHA--IHKMSLDKSS--KF--------SKNTA---------VWCVAFCADFT-II 218 (708)
Q Consensus 167 -~~~l-~~~~~d~i~iwd~~-~---~~~--~~~~~~~~~~--~~--------~~~~~---------v~~~~~~~~~~-l~ 218 (708)
.+.+ +.++.+.+.+-+.- . ... ...+...+.. |. .+... ...++|+|.-+ ++
T Consensus 167 d~rh~~~l~s~g~vl~~~~l~~sep~~pgk~~qI~sd~Sdl~~lere~at~ns~ts~~~sa~fity~a~faf~p~~rn~l 246 (1062)
T KOG1912|consen 167 DSRHFCVLGSKGFVLSCKDLGLSEPDVPGKEFQITSDHSDLAHLERETATGNSTTSTPASAYFITYCAQFAFSPHWRNIL 246 (1062)
T ss_pred CcceEEEEccCceEEEEeccCCCCCCCCceeEEEecCccchhhhhhhhhccccccCCCcchhHHHHHHhhhcChhhhceE
Confidence 3333 44455544444432 1 111 1122222100 00 00000 11246677653 55
Q ss_pred EEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCC--CEEEEEecCCeEEEEEccCCccccc--------CCCCCCC
Q psy12614 219 TGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDE--NYLYCAGVDPTVVCFQRTRKPQVCS--------TSGPEQG 288 (708)
Q Consensus 219 ~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~--~~l~~~~~dg~i~iw~~~~~~~~~~--------~~g~~~~ 288 (708)
.......+.++|++-..++....-..+.+.-+.+-|++ ..|++...||.+.+|-....+.... ..+.
T Consensus 247 fi~~prellv~dle~~~~l~vvpier~~akfv~vlP~~~rd~LfclH~nG~ltirvrk~~~~~f~~~~~~l~~dl~~--- 323 (1062)
T KOG1912|consen 247 FITFPRELLVFDLEYECCLAVVPIERGGAKFVDVLPDPRRDALFCLHSNGRLTIRVRKEEPTEFKKPNASLSMDLGE--- 323 (1062)
T ss_pred EEEeccceEEEcchhhceeEEEEeccCCcceeEeccCCCcceEEEEecCCeEEEEEeeccCccccccchhhcccccc---
Confidence 55667789999999888888887777777777777766 5799999999999997765221111 1111
Q ss_pred CcceEEeEEEeccccceEEEEEe--CCEEEEEcCCCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEEEcCCeEEE
Q psy12614 289 SSVWVRSVNRVIHEGDVKSLALH--GNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLEL 366 (708)
Q Consensus 289 ~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~i 366 (708)
+.-........ .++..++.. .+.++.--.+|.+.+|.+.++.+........-.-..-|+-++.-+..+...-+.+
T Consensus 324 --Q~~~vr~m~~~-rp~~~~~cPs~~sa~avl~s~g~~~~w~l~~~ri~~~~~s~~iel~~pf~f~~~~~~v~k~~l~~L 400 (1062)
T KOG1912|consen 324 --QVHVVRPMEEF-RPVIGASCPSTPSALAVLYSSGDSTFWQLSNGRIHLDYRSSSIELVLPFDFNLSTKLVGKTSLISL 400 (1062)
T ss_pred --ceEEEeechhc-ccceeecCCCChhhhhhhhhcchhHHHhhhcCCcCcccccccccccccccccCceeehhhccccch
Confidence 00011111111 111111111 3444455567888889887654222110000001111222222222211111111
Q ss_pred EEecCCCCCCCCCCC-CCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEEEc-CCceEEEEEEecCCcceeEEee
Q psy12614 367 WSLGSAQSTDLSSHS-NTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYST-ESCVRLHSLDLDGDKPQISRIK 444 (708)
Q Consensus 367 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~-d~~i~i~~~~~~~~~~~~~~~~ 444 (708)
=+-+ ++. |.......+.+. +........+....+. -.++|+|+ .|+|.++|+.+ +.+ ..
T Consensus 401 S~dg--------~h~sGs~~~~~~p~p~-~t~~~~~p~~n~~~~~----~pLvAvGT~sGTV~vvdvst--~~v-~~--- 461 (1062)
T KOG1912|consen 401 SDDG--------SHSSGSTCVRMRPMPE-LTKVENDPGGNTPAGT----VPLVAVGTNSGTVDVVDVST--NAV-AA--- 461 (1062)
T ss_pred hhcC--------CCCCCceeeecccCcc-cceeecCCCCCcccee----eeeEEeecCCceEEEEEecc--hhh-hh---
Confidence 1111 111 111111111111 1111111111111111 13566777 99999999997 332 11
Q ss_pred cCCcccccceeEEEEEecCCCeEEEEecC-----C----c--EEEecCCCeEEEEEecCCCCCccCcceEEEEECCCCcE
Q psy12614 445 NLPAPLFKSIFTHVLISADSTLLLAVSLN-----G----P--LYIIDLSSLEIKYCVDPYKSNLMSDVISLVQMSECKQY 513 (708)
Q Consensus 445 ~~~~~~~~~~i~~~~~s~d~~~l~~~~~d-----g----~--i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~ 513 (708)
.+.-|.. .|.++.|-.+.+++-.+... | . +-++.+|-.+..+.++... ..+|..+..|.-|+|
T Consensus 462 ~fsvht~--~VkgleW~g~sslvSfsys~~n~~sg~vrN~l~vtdLrtGlsk~fR~l~~~d----espI~~irvS~~~~y 535 (1062)
T KOG1912|consen 462 SFSVHTS--LVKGLEWLGNSSLVSFSYSHVNSASGGVRNDLVVTDLRTGLSKRFRGLQKPD----ESPIRAIRVSSSGRY 535 (1062)
T ss_pred hhccccc--ceeeeeeccceeEEEeeeccccccccceeeeEEEEEcccccccccccCCCCC----cCcceeeeecccCce
Confidence 1455544 66678887776666544321 1 1 4555665333333333333 669999999999999
Q ss_pred EEEEecCCeEEEEECC
Q psy12614 514 IVCADRKSHVVIWKNG 529 (708)
Q Consensus 514 l~~~~~d~~i~iw~~~ 529 (708)
|+..-.|.-+.+||+.
T Consensus 536 Lai~Fr~~plEiwd~k 551 (1062)
T KOG1912|consen 536 LAILFRREPLEIWDLK 551 (1062)
T ss_pred EEEEecccchHHHhhc
Confidence 9999999999999995
|
|
| >KOG2110|consensus | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.6e-15 Score=137.12 Aligned_cols=236 Identities=17% Similarity=0.191 Sum_probs=184.5
Q ss_pred CCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEeCCEEEEEcCCC--cEEEEECCCCe
Q psy12614 25 EPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWFNDRLFSGGLQG--FVNEYDMRRLN 102 (708)
Q Consensus 25 h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~~~~l~s~~~d~--~i~vwd~~~~~ 102 (708)
.+..+..+.|+.+...|.+|+.|| -++|+........ ..... +..|..+-|+...+|..+.+. .+++.+++.+.
T Consensus 4 ~~~ti~~~~~Nqd~~~lsvGs~~G-yk~~~~~~~~k~~-~~~~~--~~~IvEmLFSSSLvaiV~~~qpr~Lkv~~~Kk~~ 79 (391)
T KOG2110|consen 4 KKPTINFIGFNQDSTLLSVGSKDG-YKIFSCSPFEKCF-SKDTE--GVSIVEMLFSSSLVAIVSIKQPRKLKVVHFKKKT 79 (391)
T ss_pred CCcceeeeeeccceeEEEccCCCc-eeEEecCchHHhh-cccCC--CeEEEEeecccceeEEEecCCCceEEEEEcccCc
Confidence 345677888999999999999986 7888887644322 11122 257888888877777766544 49999999888
Q ss_pred EeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEec-ccccccEEEEEECCCCCEEEEec-CC--eE
Q psy12614 103 IKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLL-DRQQGRILCTAWHSSGDYLVTGC-AA--AV 178 (708)
Q Consensus 103 ~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~-~~~~~~v~~~~~s~d~~~l~~~~-~d--~i 178 (708)
.+..+.. ...|.++.++.+ +|+++-.+ .|+|||+.+.+++..... ..+...+.++.+++.+.+||.-+ .+ .|
T Consensus 80 ~ICe~~f-pt~IL~VrmNr~--RLvV~Lee-~IyIydI~~MklLhTI~t~~~n~~gl~AlS~n~~n~ylAyp~s~t~GdV 155 (391)
T KOG2110|consen 80 TICEIFF-PTSILAVRMNRK--RLVVCLEE-SIYIYDIKDMKLLHTIETTPPNPKGLCALSPNNANCYLAYPGSTTSGDV 155 (391)
T ss_pred eEEEEec-CCceEEEEEccc--eEEEEEcc-cEEEEecccceeehhhhccCCCccceEeeccCCCCceEEecCCCCCceE
Confidence 7777664 357888888764 57666554 499999999988732222 24556688888888888998643 33 89
Q ss_pred EEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCc-EEEEeCCCCeeEEEeecc--ccCeEEEEEeC
Q psy12614 179 RVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGF-VRFWDGKTGVQWSDVKTH--KKDILALTVSE 254 (708)
Q Consensus 179 ~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~-i~~wd~~~~~~~~~~~~~--~~~i~~~~~s~ 254 (708)
.+||+.+-+.+..+..+ .+.+.+++|+++|. +++++..|+ |+|+.+.+|+.+..+.-. ...|.+++|+|
T Consensus 156 ~l~d~~nl~~v~~I~aH-------~~~lAalafs~~G~llATASeKGTVIRVf~v~~G~kl~eFRRG~~~~~IySL~Fs~ 228 (391)
T KOG2110|consen 156 VLFDTINLQPVNTINAH-------KGPLAALAFSPDGTLLATASEKGTVIRVFSVPEGQKLYEFRRGTYPVSIYSLSFSP 228 (391)
T ss_pred EEEEcccceeeeEEEec-------CCceeEEEECCCCCEEEEeccCceEEEEEEcCCccEeeeeeCCceeeEEEEEEECC
Confidence 99999999999888843 89999999999996 888888886 789999999999888632 35688999999
Q ss_pred CCCEEEEEecCCeEEEEEccC
Q psy12614 255 DENYLYCAGVDPTVVCFQRTR 275 (708)
Q Consensus 255 ~~~~l~~~~~dg~i~iw~~~~ 275 (708)
++++|++.+..++|++|.+..
T Consensus 229 ds~~L~~sS~TeTVHiFKL~~ 249 (391)
T KOG2110|consen 229 DSQFLAASSNTETVHIFKLEK 249 (391)
T ss_pred CCCeEEEecCCCeEEEEEecc
Confidence 999999999999999999987
|
|
| >PRK11028 6-phosphogluconolactonase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=6.8e-16 Score=153.03 Aligned_cols=272 Identities=14% Similarity=0.146 Sum_probs=173.4
Q ss_pred EEEEcCCCeEEEEeCCC-Cc---eeecCccCCCCceEEEEcCCcEEEEE--cCCeEEEEEecCCCCCCCCCCCCCCcccC
Q psy12614 315 LYSGGLDSYLSLSYYPP-KT---LVKYPCTLAQSTPVSLAKDIQHVLLQ--YTSHLELWSLGSAQSTDLSSHSNTTGVPL 388 (708)
Q Consensus 315 l~s~~~d~~i~iw~~~~-~~---~~~~~~~~~~~~~~~~s~~~~~l~~~--~~~~i~i~~~~~~~~~~~~~~~~~~~~~~ 388 (708)
+++...++.|.+|++.+ +. +..+. .......++++|++++|+++ .++.|.+|++....
T Consensus 5 y~~~~~~~~I~~~~~~~~g~l~~~~~~~-~~~~~~~l~~spd~~~lyv~~~~~~~i~~~~~~~~g--------------- 68 (330)
T PRK11028 5 YIASPESQQIHVWNLNHEGALTLLQVVD-VPGQVQPMVISPDKRHLYVGVRPEFRVLSYRIADDG--------------- 68 (330)
T ss_pred EEEcCCCCCEEEEEECCCCceeeeeEEe-cCCCCccEEECCCCCEEEEEECCCCcEEEEEECCCC---------------
Confidence 34457789999999964 33 22222 33556789999999988764 56789999986321
Q ss_pred CCCceEEEEEEecCCCceEEEEeCCCCcEEEEEc--CCceEEEEEEecCCcceeEEeecCCcccccceeEEEEEecCCCe
Q psy12614 389 LSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYST--ESCVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVLISADSTL 466 (708)
Q Consensus 389 ~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~--d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~ 466 (708)
........ ........++++|+|++++++. ++.|.+|+++..+.... .+..+++.. ...+++++|+|++
T Consensus 69 ---~l~~~~~~-~~~~~p~~i~~~~~g~~l~v~~~~~~~v~v~~~~~~g~~~~--~~~~~~~~~---~~~~~~~~p~g~~ 139 (330)
T PRK11028 69 ---ALTFAAES-PLPGSPTHISTDHQGRFLFSASYNANCVSVSPLDKDGIPVA--PIQIIEGLE---GCHSANIDPDNRT 139 (330)
T ss_pred ---ceEEeeee-cCCCCceEEEECCCCCEEEEEEcCCCeEEEEEECCCCCCCC--ceeeccCCC---cccEeEeCCCCCE
Confidence 01111111 1233567899999999999854 89999999974221111 111122211 2333789999999
Q ss_pred EEEEecCCc---EEEecCCCeEEE----EEecCCCCCccCcceEEEEECCCCcEEEEEec-CCeEEEEECCc----e--e
Q psy12614 467 LLAVSLNGP---LYIIDLSSLEIK----YCVDPYKSNLMSDVISLVQMSECKQYIVCADR-KSHVVIWKNGQ----H--H 532 (708)
Q Consensus 467 l~~~~~dg~---i~~~~~~~~~~~----~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~-d~~i~iw~~~~----~--~ 532 (708)
+++++.... +|+++.. .... ....... ......++|+|||++|++++. ++.|.+|+++. . .
T Consensus 140 l~v~~~~~~~v~v~d~~~~-g~l~~~~~~~~~~~~----g~~p~~~~~~pdg~~lyv~~~~~~~v~v~~~~~~~~~~~~~ 214 (330)
T PRK11028 140 LWVPCLKEDRIRLFTLSDD-GHLVAQEPAEVTTVE----GAGPRHMVFHPNQQYAYCVNELNSSVDVWQLKDPHGEIECV 214 (330)
T ss_pred EEEeeCCCCEEEEEEECCC-CcccccCCCceecCC----CCCCceEEECCCCCEEEEEecCCCEEEEEEEeCCCCCEEEE
Confidence 987766533 7887652 1111 1111112 224567999999999988876 89999999972 1 1
Q ss_pred eecCCC------CCCceEEEEcCCCCEEEEEec-CCcEEEEEcCCCCCCchhhhhhccCchhhhcCCCCeeEEEeCCCCC
Q psy12614 533 ASLPRY------RKPSTAMAIHPTLSTLVTVYS-DHRIVEFDLNRKAFTTFSRKLETNHPNEWLSRQLPVLGIEFDPQDS 605 (708)
Q Consensus 533 ~~~~~~------~~~v~~l~~s~d~~~l~~~~~-dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~~~ 605 (708)
..+..+ ......+.|+||+++|+++.. ++.|.+|+++..... + .+...... ......++|+|||+
T Consensus 215 ~~~~~~p~~~~~~~~~~~i~~~pdg~~lyv~~~~~~~I~v~~i~~~~~~-~------~~~~~~~~-~~~p~~~~~~~dg~ 286 (330)
T PRK11028 215 QTLDMMPADFSDTRWAADIHITPDGRHLYACDRTASLISVFSVSEDGSV-L------SFEGHQPT-ETQPRGFNIDHSGK 286 (330)
T ss_pred EEEecCCCcCCCCccceeEEECCCCCEEEEecCCCCeEEEEEEeCCCCe-E------EEeEEEec-cccCCceEECCCCC
Confidence 122211 123346899999999998854 788999999654321 0 00011110 12456789999999
Q ss_pred ceEEEEc-CeeEEEEecCCC
Q psy12614 606 SLIYLMD-DSALCVINKNKS 624 (708)
Q Consensus 606 ~l~~~~~-d~~i~~wd~~~~ 624 (708)
+|+++.. +++|.+|+++.+
T Consensus 287 ~l~va~~~~~~v~v~~~~~~ 306 (330)
T PRK11028 287 YLIAAGQKSHHISVYEIDGE 306 (330)
T ss_pred EEEEEEccCCcEEEEEEcCC
Confidence 9998776 899999998644
|
|
| >KOG1587|consensus | Back alignment and domain information |
|---|
Probab=99.76 E-value=9e-17 Score=161.54 Aligned_cols=243 Identities=15% Similarity=0.205 Sum_probs=182.9
Q ss_pred CCCCcEEEEEEcCC-CCEEEEEeCCCcEEEEeCCCCCe-----EEEEEecCCCCCcEEEEEEe----CCEEEEEcCCCcE
Q psy12614 24 PEPKVINCIACEPK-SSRLAVSRADQSIEIWDISETPH-----VDRVFIGDPLSNSIECLTWF----NDRLFSGGLQGFV 93 (708)
Q Consensus 24 ~h~~~v~~~~~s~~-~~~la~~~~dg~v~iwd~~~~~~-----~~~~~~~h~~~~~v~~l~~~----~~~l~s~~~d~~i 93 (708)
.-+..|+|+.|+|. ..+||.|..+|.|.+||+..+.. +......|. .+++.+.|. +..+++++.||.|
T Consensus 240 ~~~s~v~~~~f~p~~p~ll~gG~y~GqV~lWD~~~~~~~~~s~ls~~~~sh~--~~v~~vvW~~~~~~~~f~s~ssDG~i 317 (555)
T KOG1587|consen 240 ESPSEVTCLKFCPFDPNLLAGGCYNGQVVLWDLRKGSDTPPSGLSALEVSHS--EPVTAVVWLQNEHNTEFFSLSSDGSI 317 (555)
T ss_pred ecCCceeEEEeccCCcceEEeeccCceEEEEEccCCCCCCCcccccccccCC--cCeEEEEEeccCCCCceEEEecCCcE
Confidence 34688999999995 56788889999999999988654 222344566 999999998 5569999999999
Q ss_pred EEEECCCCeE------eEEEe------ecCCceEEEEEecC-CCEEEEEeCCCcEEEEEccCCcEEE------EEecccc
Q psy12614 94 NEYDMRRLNI------KSSTA------VTSGTCWCLSVHKK-KRLLAAGTEQGHINLFQISDEGLLY------EKLLDRQ 154 (708)
Q Consensus 94 ~vwd~~~~~~------~~~~~------~~~~~v~~~~~s~~-~~~la~~~~d~~i~iwd~~~~~~~~------~~~~~~~ 154 (708)
..|+++.-.. ..... .....+++++|.+. -..+++|+++|.|.--+..+..... ...+..|
T Consensus 318 ~~W~~~~l~~P~e~~~~~~~~~~~~~~~~~~~~t~~~F~~~~p~~FiVGTe~G~v~~~~r~g~~~~~~~~~~~~~~~~~h 397 (555)
T KOG1587|consen 318 CSWDTDMLSLPVEGLLLESKKHKGQQSSKAVGATSLKFEPTDPNHFIVGTEEGKVYKGCRKGYTPAPEVSYKGHSTFITH 397 (555)
T ss_pred eeeeccccccchhhcccccccccccccccccceeeEeeccCCCceEEEEcCCcEEEEEeccCCccccccccccccccccc
Confidence 9998765332 11111 22346889999884 4578899999988774444332221 1345668
Q ss_pred cccEEEEEECCCCCEEEEecCC-eEEEEEcC-CCceEEEEEecccCCCCCceeEEEEEEccCC--EEEEEcCCCcEEEEe
Q psy12614 155 QGRILCTAWHSSGDYLVTGCAA-AVRVWDIH-KGHAIHKMSLDKSSKFSKNTAVWCVAFCADF--TIITGDSGGFVRFWD 230 (708)
Q Consensus 155 ~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~l~~~~~dg~i~~wd 230 (708)
.++|.++.++|=+..++..+.| ++++|.-. ...++..+... ...+++++|+|-. -|+++..+|.|.+||
T Consensus 398 ~g~v~~v~~nPF~~k~fls~gDW~vriWs~~~~~~Pl~~~~~~-------~~~v~~vaWSptrpavF~~~d~~G~l~iWD 470 (555)
T KOG1587|consen 398 IGPVYAVSRNPFYPKNFLSVGDWTVRIWSEDVIASPLLSLDSS-------PDYVTDVAWSPTRPAVFATVDGDGNLDIWD 470 (555)
T ss_pred CcceEeeecCCCccceeeeeccceeEeccccCCCCcchhhhhc-------cceeeeeEEcCcCceEEEEEcCCCceehhh
Confidence 8999999999988766665558 99999976 45555554432 5669999999977 488999999999999
Q ss_pred CCCC--eeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccC
Q psy12614 231 GKTG--VQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTR 275 (708)
Q Consensus 231 ~~~~--~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~ 275 (708)
+... .++.+.+-+......+.|+++|+.|++|+..|.+.+|++..
T Consensus 471 Ll~~~~~Pv~s~~~~~~~l~~~~~s~~g~~lavGd~~G~~~~~~l~~ 517 (555)
T KOG1587|consen 471 LLQDDEEPVLSQKVCSPALTRVRWSPNGKLLAVGDANGTTHILKLSE 517 (555)
T ss_pred hhccccCCcccccccccccceeecCCCCcEEEEecCCCcEEEEEcCc
Confidence 9654 34555554566677788899999999999999999999975
|
|
| >KOG0290|consensus | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.9e-16 Score=137.94 Aligned_cols=274 Identities=15% Similarity=0.217 Sum_probs=196.3
Q ss_pred CcEEEEEEe-----CCEEEEEcC----CCcEEEEEC--CCCeEeEEE-eecCCceEEEEEecCCC-----EEEEEeCCCc
Q psy12614 72 NSIECLTWF-----NDRLFSGGL----QGFVNEYDM--RRLNIKSST-AVTSGTCWCLSVHKKKR-----LLAAGTEQGH 134 (708)
Q Consensus 72 ~~v~~l~~~-----~~~l~s~~~----d~~i~vwd~--~~~~~~~~~-~~~~~~v~~~~~s~~~~-----~la~~~~d~~ 134 (708)
-.+.++.|+ +.+|+.|+. .+.|.|-.+ ++++.+..- ..|.-+++.+.|.|+.. +||+.+ ..
T Consensus 45 ~~lya~~Ws~~~~~~~rla~gS~~Ee~~Nkvqiv~ld~~s~e~~~~a~fd~~YP~tK~~wiPd~~g~~pdlLATs~--D~ 122 (364)
T KOG0290|consen 45 WPLYAMNWSVRPDKKFRLAVGSFIEEYNNKVQIVQLDEDSGELVEDANFDHPYPVTKLMWIPDSKGVYPDLLATSS--DF 122 (364)
T ss_pred CceeeeccccCCCcceeEEEeeeccccCCeeEEEEEccCCCceeccCCCCCCCCccceEecCCccccCcchhhccc--Ce
Confidence 478889998 668888873 456666544 344444332 26888999999999863 566543 46
Q ss_pred EEEEEccC--CcEEEEEecc-----cccccEEEEEECC-CCCEEEEecCC-eEEEEEcCCCce--EEEEEecccCCCCCc
Q psy12614 135 INLFQISD--EGLLYEKLLD-----RQQGRILCTAWHS-SGDYLVTGCAA-AVRVWDIHKGHA--IHKMSLDKSSKFSKN 203 (708)
Q Consensus 135 i~iwd~~~--~~~~~~~~~~-----~~~~~v~~~~~s~-d~~~l~~~~~d-~i~iwd~~~~~~--~~~~~~~~~~~~~~~ 203 (708)
+++|.+.. .+......+. .+..++++..|+. |-++|.+++-| +..|||++++.. +++-.. .|.
T Consensus 123 LRlWri~~ee~~~~~~~~L~~~kns~~~aPlTSFDWne~dp~~igtSSiDTTCTiWdie~~~~~~vkTQLI------AHD 196 (364)
T KOG0290|consen 123 LRLWRIGDEESRVELQSVLNNNKNSEFCAPLTSFDWNEVDPNLIGTSSIDTTCTIWDIETGVSGTVKTQLI------AHD 196 (364)
T ss_pred EEEEeccCcCCceehhhhhccCcccccCCcccccccccCCcceeEeecccCeEEEEEEeeccccceeeEEE------ecC
Confidence 99999884 3332212222 3457889999976 55788899999 999999998733 232222 348
Q ss_pred eeEEEEEEccCCE--EEEEcCCCcEEEEeCCCCeeEEEe---eccccCeEEEEEeCCC-CEEEEEecC-CeEEEEEccCC
Q psy12614 204 TAVWCVAFCADFT--IITGDSGGFVRFWDGKTGVQWSDV---KTHKKDILALTVSEDE-NYLYCAGVD-PTVVCFQRTRK 276 (708)
Q Consensus 204 ~~v~~~~~~~~~~--l~~~~~dg~i~~wd~~~~~~~~~~---~~~~~~i~~~~~s~~~-~~l~~~~~d-g~i~iw~~~~~ 276 (708)
..|..++|..++. +++.+.||.+++||++..+.-..+ .....+...++|++.. +++|+-..| ..|.+.|++.
T Consensus 197 KEV~DIaf~~~s~~~FASvgaDGSvRmFDLR~leHSTIIYE~p~~~~pLlRLswnkqDpnymATf~~dS~~V~iLDiR~- 275 (364)
T KOG0290|consen 197 KEVYDIAFLKGSRDVFASVGADGSVRMFDLRSLEHSTIIYEDPSPSTPLLRLSWNKQDPNYMATFAMDSNKVVILDIRV- 275 (364)
T ss_pred cceeEEEeccCccceEEEecCCCcEEEEEecccccceEEecCCCCCCcceeeccCcCCchHHhhhhcCCceEEEEEecC-
Confidence 9999999999774 999999999999999876543333 2235678889998855 677765555 5799999987
Q ss_pred cccccCCCCCCCCcceEEeEEEeccccceEEEEEe---CCEEEEEcCCCeEEEEeCCCCceeecCc------cCCCCceE
Q psy12614 277 PQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH---GNRLYSGGLDSYLSLSYYPPKTLVKYPC------TLAQSTPV 347 (708)
Q Consensus 277 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~---~~~l~s~~~d~~i~iw~~~~~~~~~~~~------~~~~~~~~ 347 (708)
. ..+...+++|.+.|.+++|. ...|+++|.|..+.+||+.......... ....+..+
T Consensus 276 -------P-------~tpva~L~~H~a~VNgIaWaPhS~~hictaGDD~qaliWDl~q~~~~~~~dPilay~a~~EVNqi 341 (364)
T KOG0290|consen 276 -------P-------CTPVARLRNHQASVNGIAWAPHSSSHICTAGDDCQALIWDLQQMPRENGEDPILAYTAGGEVNQI 341 (364)
T ss_pred -------C-------CcceehhhcCcccccceEecCCCCceeeecCCcceEEEEecccccccCCCCchhhhhccceeeee
Confidence 2 23678899999999999998 8899999999999999997643211111 23455678
Q ss_pred EEEc-CCcEEEEEcCCeEEEEE
Q psy12614 348 SLAK-DIQHVLLQYTSHLELWS 368 (708)
Q Consensus 348 ~~s~-~~~~l~~~~~~~i~i~~ 368 (708)
.+++ .+..++.+.++.+.+..
T Consensus 342 ~Ws~~~~Dwiai~~~kkleiLR 363 (364)
T KOG0290|consen 342 QWSSSQPDWIAICFGKKLEILR 363 (364)
T ss_pred eecccCCCEEEEEecCeeeEEe
Confidence 8874 56778878877776643
|
|
| >KOG1523|consensus | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.6e-16 Score=140.53 Aligned_cols=214 Identities=16% Similarity=0.118 Sum_probs=169.8
Q ss_pred CCceEEEEeCCCCcEEEEEc-CCceEEEEEEecCCcceeEEeecCCcccccceeEEEEEecCCCeEEEEecCCc--EEEe
Q psy12614 403 NATIRCSVVSNDGKYVAYST-ESCVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVLISADSTLLLAVSLNGP--LYII 479 (708)
Q Consensus 403 ~~~i~~~~~s~~g~~l~~~~-d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~~~~~dg~--i~~~ 479 (708)
..+|+|.||++|+..+|++. ...+.||.....+ ..+..+++..|.. .|+.+.|+|....|++++.|.. +|..
T Consensus 10 ~~pitchAwn~drt~iAv~~~~~evhiy~~~~~~---~w~~~htls~Hd~--~vtgvdWap~snrIvtcs~drnayVw~~ 84 (361)
T KOG1523|consen 10 LEPITCHAWNSDRTQIAVSPNNHEVHIYSMLGAD---LWEPAHTLSEHDK--IVTGVDWAPKSNRIVTCSHDRNAYVWTQ 84 (361)
T ss_pred cCceeeeeecCCCceEEeccCCceEEEEEecCCC---CceeceehhhhCc--ceeEEeecCCCCceeEccCCCCcccccc
Confidence 47899999999999999976 7799999988522 3455555777755 7888999999999999999988 8888
Q ss_pred -cCCCeEEEEEecCCCCCccCcceEEEEECCCCcEEEEEecCCeEEEEECCce-ee-----ecCCCCCCceEEEEcCCCC
Q psy12614 480 -DLSSLEIKYCVDPYKSNLMSDVISLVQMSECKQYIVCADRKSHVVIWKNGQH-HA-----SLPRYRKPSTAMAIHPTLS 552 (708)
Q Consensus 480 -~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~-~~-----~~~~~~~~v~~l~~s~d~~ 552 (708)
+.+..+..-.+.. + +...+++.|+|.++.+|+|+....|.||-++.. .. .-..+.+.|++++|+|++-
T Consensus 85 ~~~~~WkptlvLlR---i--NrAAt~V~WsP~enkFAVgSgar~isVcy~E~ENdWWVsKhikkPirStv~sldWhpnnV 159 (361)
T KOG1523|consen 85 PSGGTWKPTLVLLR---I--NRAATCVKWSPKENKFAVGSGARLISVCYYEQENDWWVSKHIKKPIRSTVTSLDWHPNNV 159 (361)
T ss_pred CCCCeeccceeEEE---e--ccceeeEeecCcCceEEeccCccEEEEEEEecccceehhhhhCCccccceeeeeccCCcc
Confidence 5454433322221 2 668999999999999999999999999999832 22 3455678899999999999
Q ss_pred EEEEEecCCcEEEEEc-----CC-CCCCchhhhhhcc-CchhhhcCCCCeeEEEeCCCCCceEEEEcCeeEEEEecCCCC
Q psy12614 553 TLVTVYSDHRIVEFDL-----NR-KAFTTFSRKLETN-HPNEWLSRQLPVLGIEFDPQDSSLIYLMDDSALCVINKNKSL 625 (708)
Q Consensus 553 ~l~~~~~dg~i~vwd~-----~~-~~~~~~~~~~~~~-~~~~~~~~~~~i~~l~~s~~~~~l~~~~~d~~i~~wd~~~~~ 625 (708)
+|++|+.|++.+||.. +. .....|..+.++. +..++....+-|..+.|+|+|..|+..+.|+++.+-|...+.
T Consensus 160 LlaaGs~D~k~rVfSayIK~Vdekpap~pWgsk~PFG~lm~E~~~~ggwvh~v~fs~sG~~lawv~Hds~v~~~da~~p~ 239 (361)
T KOG1523|consen 160 LLAAGSTDGKCRVFSAYIKGVDEKPAPTPWGSKMPFGQLMSEASSSGGWVHGVLFSPSGNRLAWVGHDSTVSFVDAAGPS 239 (361)
T ss_pred eecccccCcceeEEEEeeeccccCCCCCCCccCCcHHHHHHhhccCCCceeeeEeCCCCCEeeEecCCCceEEeecCCCc
Confidence 9999999999999974 22 2344576666555 444555667789999999999999999999999999988776
Q ss_pred C
Q psy12614 626 A 626 (708)
Q Consensus 626 ~ 626 (708)
+
T Consensus 240 ~ 240 (361)
T KOG1523|consen 240 E 240 (361)
T ss_pred h
Confidence 4
|
|
| >KOG1188|consensus | Back alignment and domain information |
|---|
Probab=99.75 E-value=3.8e-17 Score=145.74 Aligned_cols=187 Identities=14% Similarity=0.220 Sum_probs=152.7
Q ss_pred CEEEEEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEec--CCCEEEEEeCCCcEEEEEccCCcEEEEEeccccc-ccE
Q psy12614 82 DRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHK--KKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQ-GRI 158 (708)
Q Consensus 82 ~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~--~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~-~~v 158 (708)
..+|++...|.|++||..+++.+..++++...+..++|.. ....+.+++.||+|++||++............++ .+.
T Consensus 41 ~~vav~lSngsv~lyd~~tg~~l~~fk~~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~a~~~~~~~~~~~f 120 (376)
T KOG1188|consen 41 TAVAVSLSNGSVRLYDKGTGQLLEEFKGPPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAESARISWTQQSGTPF 120 (376)
T ss_pred eeEEEEecCCeEEEEeccchhhhheecCCCCcccceEEecCCCCCeeEEeccCCeEEEEEeecchhhhheeccCCCCCcc
Confidence 5688899999999999999999999999999999999987 4567889999999999999987665545566665 455
Q ss_pred EEEEECCCCCEEEEecC----C-eEEEEEcCCCce-EEEEEecccCCCCCceeEEEEEEccCC--EEEEEcCCCcEEEEe
Q psy12614 159 LCTAWHSSGDYLVTGCA----A-AVRVWDIHKGHA-IHKMSLDKSSKFSKNTAVWCVAFCADF--TIITGDSGGFVRFWD 230 (708)
Q Consensus 159 ~~~~~s~d~~~l~~~~~----d-~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~--~l~~~~~dg~i~~wd 230 (708)
.+++..-.++.+++|.. + .|.+||++..+. +..+.. .|...|+++.|+|.. .|++|+.||.|.+||
T Consensus 121 ~~ld~nck~~ii~~GtE~~~s~A~v~lwDvR~~qq~l~~~~e------SH~DDVT~lrFHP~~pnlLlSGSvDGLvnlfD 194 (376)
T KOG1188|consen 121 ICLDLNCKKNIIACGTELTRSDASVVLWDVRSEQQLLRQLNE------SHNDDVTQLRFHPSDPNLLLSGSVDGLVNLFD 194 (376)
T ss_pred eEeeccCcCCeEEeccccccCceEEEEEEeccccchhhhhhh------hccCcceeEEecCCCCCeEEeecccceEEeee
Confidence 66666657778887764 4 799999998777 555544 448999999999977 499999999999999
Q ss_pred CCCCe----eEEEeeccccCeEEEEEeCCC-CEEEEEecCCeEEEEEccC
Q psy12614 231 GKTGV----QWSDVKTHKKDILALTVSEDE-NYLYCAGVDPTVVCFQRTR 275 (708)
Q Consensus 231 ~~~~~----~~~~~~~~~~~i~~~~~s~~~-~~l~~~~~dg~i~iw~~~~ 275 (708)
++... ++.++. |...|.++.|..++ +.|.+-+......+|+++.
T Consensus 195 ~~~d~EeDaL~~viN-~~sSI~~igw~~~~ykrI~clTH~Etf~~~ele~ 243 (376)
T KOG1188|consen 195 TKKDNEEDALLHVIN-HGSSIHLIGWLSKKYKRIMCLTHMETFAIYELED 243 (376)
T ss_pred cCCCcchhhHHHhhc-ccceeeeeeeecCCcceEEEEEccCceeEEEccC
Confidence 87542 233333 77889999999887 5688888899999999998
|
|
| >KOG0644|consensus | Back alignment and domain information |
|---|
Probab=99.75 E-value=3.1e-18 Score=169.77 Aligned_cols=277 Identities=18% Similarity=0.231 Sum_probs=212.6
Q ss_pred EEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEcc
Q psy12614 64 VFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQIS 141 (708)
Q Consensus 64 ~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~ 141 (708)
.+.||. ..|.|+.|. |.++++|+.|..++||..+++.++....+|.+.|+.++.+.++.++|+++.|..|++|.+.
T Consensus 185 rLlgH~--naVyca~fDrtg~~Iitgsdd~lvKiwS~et~~~lAs~rGhs~ditdlavs~~n~~iaaaS~D~vIrvWrl~ 262 (1113)
T KOG0644|consen 185 RLLGHR--NAVYCAIFDRTGRYIITGSDDRLVKIWSMETARCLASCRGHSGDITDLAVSSNNTMIAAASNDKVIRVWRLP 262 (1113)
T ss_pred HHHhhh--hheeeeeeccccceEeecCccceeeeeeccchhhhccCCCCccccchhccchhhhhhhhcccCceEEEEecC
Confidence 466899 999999999 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEE
Q psy12614 142 DEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IIT 219 (708)
Q Consensus 142 ~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~ 219 (708)
.+..+ ..+.+|.+.|++++|+|-- +.+.| ++++||.+- ..+ +..+....|.....+.++.|..++. +++
T Consensus 263 ~~~pv--svLrghtgavtaiafsP~~----sss~dgt~~~wd~r~-~~~--~y~prp~~~~~~~~~~s~~~~~~~~~f~T 333 (1113)
T KOG0644|consen 263 DGAPV--SVLRGHTGAVTAIAFSPRA----SSSDDGTCRIWDARL-EPR--IYVPRPLKFTEKDLVDSILFENNGDRFLT 333 (1113)
T ss_pred CCchH--HHHhccccceeeeccCccc----cCCCCCceEeccccc-ccc--ccCCCCCCcccccceeeeecccccccccc
Confidence 99988 8899999999999999965 55666 999999871 111 1111111123356677778877774 999
Q ss_pred EcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCC-CEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEE
Q psy12614 220 GDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDE-NYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNR 298 (708)
Q Consensus 220 ~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~-~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~ 298 (708)
++.++.-..|....- ..+...+.-+.++.+. .+.+++-.+..+.+|++.+ |+ ..+.+
T Consensus 334 gs~d~ea~n~e~~~l------~~~~~~lif~t~ssd~~~~~~~ar~~~~~~vwnl~~--------g~--------l~H~l 391 (1113)
T KOG0644|consen 334 GSRDGEARNHEFEQL------AWRSNLLIFVTRSSDLSSIVVTARNDHRLCVWNLYT--------GQ--------LLHNL 391 (1113)
T ss_pred ccCCcccccchhhHh------hhhccceEEEeccccccccceeeeeeeEeeeeeccc--------ch--------hhhhh
Confidence 999998888876422 1122222222222222 4566777788899999999 86 67888
Q ss_pred eccccceEEEEEe---CCEEEEEcCCCeEEEEeCCCCceee-cCccCCCCceEEEEcCCcEEEEE-cCCeEEEEEecCCC
Q psy12614 299 VIHEGDVKSLALH---GNRLYSGGLDSYLSLSYYPPKTLVK-YPCTLAQSTPVSLAKDIQHVLLQ-YTSHLELWSLGSAQ 373 (708)
Q Consensus 299 ~~~~~~v~~l~~~---~~~l~s~~~d~~i~iw~~~~~~~~~-~~~~~~~~~~~~~s~~~~~l~~~-~~~~i~i~~~~~~~ 373 (708)
.+|...+..+.++ .....+++.||...|||+-.+...+ +.........-.||+||..++.. .-|.+.|.....+.
T Consensus 392 ~ghsd~~yvLd~Hpfn~ri~msag~dgst~iwdi~eg~pik~y~~gh~kl~d~kFSqdgts~~lsd~hgql~i~g~gqs~ 471 (1113)
T KOG0644|consen 392 MGHSDEVYVLDVHPFNPRIAMSAGYDGSTIIWDIWEGIPIKHYFIGHGKLVDGKFSQDGTSIALSDDHGQLYILGTGQSK 471 (1113)
T ss_pred cccccceeeeeecCCCcHhhhhccCCCceEeeecccCCcceeeecccceeeccccCCCCceEecCCCCCceEEeccCCCc
Confidence 8999999999998 5667789999999999998776332 22122233456789999888876 44667776655443
|
|
| >KOG1310|consensus | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.1e-16 Score=151.40 Aligned_cols=214 Identities=16% Similarity=0.235 Sum_probs=158.9
Q ss_pred eeeccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe----CCEEEEEcCCCcEE
Q psy12614 19 IKFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF----NDRLFSGGLQGFVN 94 (708)
Q Consensus 19 ~~~~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~----~~~l~s~~~d~~i~ 94 (708)
...+.||++-|+|++|+.||.+||+|+.|-.+.|||.-..+.+...-+||. ..|.++.|. ...+++|..|..|+
T Consensus 43 E~eL~GH~GCVN~LeWn~dG~lL~SGSDD~r~ivWd~~~~KllhsI~TgHt--aNIFsvKFvP~tnnriv~sgAgDk~i~ 120 (758)
T KOG1310|consen 43 EAELTGHTGCVNCLEWNADGELLASGSDDTRLIVWDPFEYKLLHSISTGHT--ANIFSVKFVPYTNNRIVLSGAGDKLIK 120 (758)
T ss_pred hhhhccccceecceeecCCCCEEeecCCcceEEeecchhcceeeeeecccc--cceeEEeeeccCCCeEEEeccCcceEE
Confidence 346899999999999999999999999999999999999888887888999 999999998 66778999999999
Q ss_pred EEECCCC----------eEeEEEeecCCceEEEEEecCC-CEEEEEeCCCcEEEEEccCCcEEE--------EEeccccc
Q psy12614 95 EYDMRRL----------NIKSSTAVTSGTCWCLSVHKKK-RLLAAGTEQGHINLFQISDEGLLY--------EKLLDRQQ 155 (708)
Q Consensus 95 vwd~~~~----------~~~~~~~~~~~~v~~~~~s~~~-~~la~~~~d~~i~iwd~~~~~~~~--------~~~~~~~~ 155 (708)
++|+... ...+.+..|...|..++-.|++ ..+-++++||+|+-+|++....-. ...+...-
T Consensus 121 lfdl~~~~~~~~d~~~~~~~~~~~cht~rVKria~~p~~PhtfwsasEDGtirQyDiREph~c~p~~~~~~~l~ny~~~l 200 (758)
T KOG1310|consen 121 LFDLDSSKEGGMDHGMEETTRCWSCHTDRVKRIATAPNGPHTFWSASEDGTIRQYDIREPHVCNPDEDCPSILVNYNPQL 200 (758)
T ss_pred EEecccccccccccCccchhhhhhhhhhhhhheecCCCCCceEEEecCCcceeeecccCCccCCccccccHHHHHhchhh
Confidence 9999852 3455667899999999999999 678899999999999998632110 00111112
Q ss_pred ccEEEEEECCCC-CEEEEecCC-eEEEEEcCC--------Cc----------eEEEEEecccCC--CCC---ceeEEEEE
Q psy12614 156 GRILCTAWHSSG-DYLVTGCAA-AVRVWDIHK--------GH----------AIHKMSLDKSSK--FSK---NTAVWCVA 210 (708)
Q Consensus 156 ~~v~~~~~s~d~-~~l~~~~~d-~i~iwd~~~--------~~----------~~~~~~~~~~~~--~~~---~~~v~~~~ 210 (708)
-...++..+|.. .+|++|+.| ..++||.+. +. ++..+...+... ... ...++-++
T Consensus 201 ielk~ltisp~rp~~laVGgsdpfarLYD~Rr~lks~~s~~~~~~~pp~~~~cv~yf~p~hlkn~~gn~~~~~~~~t~vt 280 (758)
T KOG1310|consen 201 IELKCLTISPSRPYYLAVGGSDPFARLYDRRRVLKSFRSDGTMNTCPPKDCRCVRYFSPGHLKNSQGNLDRYITCCTYVT 280 (758)
T ss_pred heeeeeeecCCCCceEEecCCCchhhhhhhhhhccCCCCCccccCCCCcccchhheecCccccCcccccccceeeeEEEE
Confidence 346788899865 578889999 999999421 11 122222221100 000 12256678
Q ss_pred EccCCE-EEEEcCCCcEEEEeCCCC
Q psy12614 211 FCADFT-IITGDSGGFVRFWDGKTG 234 (708)
Q Consensus 211 ~~~~~~-l~~~~~dg~i~~wd~~~~ 234 (708)
|+|+|+ +++.-..-.|+++|+..+
T Consensus 281 fnpNGtElLvs~~gEhVYlfdvn~~ 305 (758)
T KOG1310|consen 281 FNPNGTELLVSWGGEHVYLFDVNED 305 (758)
T ss_pred ECCCCcEEEEeeCCeEEEEEeecCC
Confidence 999995 555555567888887554
|
|
| >KOG1523|consensus | Back alignment and domain information |
|---|
Probab=99.75 E-value=5.9e-16 Score=137.05 Aligned_cols=231 Identities=16% Similarity=0.212 Sum_probs=178.7
Q ss_pred CCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCC--eEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEEC-C
Q psy12614 25 EPKVINCIACEPKSSRLAVSRADQSIEIWDISETP--HVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDM-R 99 (708)
Q Consensus 25 h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~--~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~-~ 99 (708)
-..+|+|.||++|+..+|++..+..|.||...... ....++..|. ..|++++|+ .++|++++.|..-++|.. +
T Consensus 9 ~~~pitchAwn~drt~iAv~~~~~evhiy~~~~~~~w~~~htls~Hd--~~vtgvdWap~snrIvtcs~drnayVw~~~~ 86 (361)
T KOG1523|consen 9 LLEPITCHAWNSDRTQIAVSPNNHEVHIYSMLGADLWEPAHTLSEHD--KIVTGVDWAPKSNRIVTCSHDRNAYVWTQPS 86 (361)
T ss_pred ccCceeeeeecCCCceEEeccCCceEEEEEecCCCCceeceehhhhC--cceeEEeecCCCCceeEccCCCCccccccCC
Confidence 35789999999999999999999999999988754 3445899999 999999999 899999999999999998 4
Q ss_pred CCe--EeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcE--EEEEecccccccEEEEEECCCCCEEEEecC
Q psy12614 100 RLN--IKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGL--LYEKLLDRQQGRILCTAWHSSGDYLVTGCA 175 (708)
Q Consensus 100 ~~~--~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~--~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~ 175 (708)
.++ +...+..+....+++.|+|.++.+|+|+....|.+|-++..+- +....-..+...|.++.|+|++-+|++|+.
T Consensus 87 ~~~WkptlvLlRiNrAAt~V~WsP~enkFAVgSgar~isVcy~E~ENdWWVsKhikkPirStv~sldWhpnnVLlaaGs~ 166 (361)
T KOG1523|consen 87 GGTWKPTLVLLRINRAATCVKWSPKENKFAVGSGARLISVCYYEQENDWWVSKHIKKPIRSTVTSLDWHPNNVLLAAGST 166 (361)
T ss_pred CCeeccceeEEEeccceeeEeecCcCceEEeccCccEEEEEEEecccceehhhhhCCccccceeeeeccCCcceeccccc
Confidence 443 5556678889999999999999999999999999988775432 222334456788999999999999999999
Q ss_pred C-eEEEEEcCC------------------CceEEEEEecccCCCCCceeEEEEEEccCC-EEEEEcCCCcEEEEeCCCCe
Q psy12614 176 A-AVRVWDIHK------------------GHAIHKMSLDKSSKFSKNTAVWCVAFCADF-TIITGDSGGFVRFWDGKTGV 235 (708)
Q Consensus 176 d-~i~iwd~~~------------------~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~~~~~dg~i~~wd~~~~~ 235 (708)
| ..+++..-- |....++. ...+.+..+.|+|+| +|+-.+.|..+.+-|.....
T Consensus 167 D~k~rVfSayIK~Vdekpap~pWgsk~PFG~lm~E~~-------~~ggwvh~v~fs~sG~~lawv~Hds~v~~~da~~p~ 239 (361)
T KOG1523|consen 167 DGKCRVFSAYIKGVDEKPAPTPWGSKMPFGQLMSEAS-------SSGGWVHGVLFSPSGNRLAWVGHDSTVSFVDAAGPS 239 (361)
T ss_pred CcceeEEEEeeeccccCCCCCCCccCCcHHHHHHhhc-------cCCCceeeeEeCCCCCEeeEecCCCceEEeecCCCc
Confidence 9 999887521 11111111 226889999999999 59999999999999977654
Q ss_pred -eEEEeeccccCeEEEEEeCCCCEEEEEecC
Q psy12614 236 -QWSDVKTHKKDILALTVSEDENYLYCAGVD 265 (708)
Q Consensus 236 -~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d 265 (708)
.+.......-+..++.|-.+. .++.++.|
T Consensus 240 ~~v~~~~~~~lP~ls~~~ise~-~vv~ag~~ 269 (361)
T KOG1523|consen 240 ERVQSVATAQLPLLSVSWISEN-SVVAAGYD 269 (361)
T ss_pred hhccchhhccCCceeeEeecCC-ceeecCCC
Confidence 344443333566666665443 33344444
|
|
| >KOG4227|consensus | Back alignment and domain information |
|---|
Probab=99.75 E-value=5.1e-16 Score=140.76 Aligned_cols=308 Identities=13% Similarity=0.128 Sum_probs=215.4
Q ss_pred EEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECCC------CeEeEEEe-ecCCceEEEEEecCCCEEEEEeCCC
Q psy12614 63 RVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMRR------LNIKSSTA-VTSGTCWCLSVHKKKRLLAAGTEQG 133 (708)
Q Consensus 63 ~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~------~~~~~~~~-~~~~~v~~~~~s~~~~~la~~~~d~ 133 (708)
+-+.+|. +.|.++.|+ +++|++|+.|..+++|+++. .+++.... .|...|.|++|...+++|.+|..++
T Consensus 50 KD~~~H~--GCiNAlqFS~N~~~L~SGGDD~~~~~W~~de~~~~k~~KPI~~~~~~H~SNIF~L~F~~~N~~~~SG~~~~ 127 (609)
T KOG4227|consen 50 KDVREHT--GCINALQFSHNDRFLASGGDDMHGRVWNVDELMVRKTPKPIGVMEHPHRSNIFSLEFDLENRFLYSGERWG 127 (609)
T ss_pred hhhhhhc--cccceeeeccCCeEEeecCCcceeeeechHHHHhhcCCCCceeccCccccceEEEEEccCCeeEecCCCcc
Confidence 3567899 999999999 99999999999999999865 24554444 4558999999999999999999999
Q ss_pred cEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCc-eEEEEEecccCCCCCceeEEEEEE
Q psy12614 134 HINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGH-AIHKMSLDKSSKFSKNTAVWCVAF 211 (708)
Q Consensus 134 ~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~ 211 (708)
+|.+-|+++.+.+....-....+.|..+..+|..+.+++.+.+ .|.+||.+... .+..+... ........+.|
T Consensus 128 ~VI~HDiEt~qsi~V~~~~~~~~~VY~m~~~P~DN~~~~~t~~~~V~~~D~Rd~~~~~~~~~~A-----N~~~~F~t~~F 202 (609)
T KOG4227|consen 128 TVIKHDIETKQSIYVANENNNRGDVYHMDQHPTDNTLIVVTRAKLVSFIDNRDRQNPISLVLPA-----NSGKNFYTAEF 202 (609)
T ss_pred eeEeeecccceeeeeecccCcccceeecccCCCCceEEEEecCceEEEEeccCCCCCCceeeec-----CCCccceeeee
Confidence 9999999999887544444455799999999999999999999 99999987654 22222222 22556778899
Q ss_pred ccCC-E-EEEEcCCCcEEEEeCCCCee-EE------EeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccC
Q psy12614 212 CADF-T-IITGDSGGFVRFWDGKTGVQ-WS------DVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCST 282 (708)
Q Consensus 212 ~~~~-~-l~~~~~dg~i~~wd~~~~~~-~~------~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~ 282 (708)
+|.. . +++.+..+-+-+||.+..+. +. .++.....-.+..|+|+|+.+.+.-....-.+||+-.
T Consensus 203 ~P~~P~Li~~~~~~~G~~~~D~R~~~~~~~~~~~~~~L~~~~~~~M~~~~~~~G~Q~msiRR~~~P~~~D~~S------- 275 (609)
T KOG4227|consen 203 HPETPALILVNSETGGPNVFDRRMQARPVYQRSMFKGLPQENTEWMGSLWSPSGNQFMSIRRGKCPLYFDFIS------- 275 (609)
T ss_pred cCCCceeEEeccccCCCCceeeccccchHHhhhccccCcccchhhhheeeCCCCCeehhhhccCCCEEeeeec-------
Confidence 9977 3 77888889999999875432 11 1222222336788999999998876666667777765
Q ss_pred CCCCCCCcceEEeEEEecc-------ccceEEEEEe-CCEEEEEcCCCeEEEEeCCCCc-eeecCccCCCCceEEEEcCC
Q psy12614 283 SGPEQGSSVWVRSVNRVIH-------EGDVKSLALH-GNRLYSGGLDSYLSLSYYPPKT-LVKYPCTLAQSTPVSLAKDI 353 (708)
Q Consensus 283 ~g~~~~~~~~~~~~~~~~~-------~~~v~~l~~~-~~~l~s~~~d~~i~iw~~~~~~-~~~~~~~~~~~~~~~~s~~~ 353 (708)
.. . .... ..| ...+.+++|. ...+++|+.+-.|.+|.+.... ...+. .
T Consensus 276 -~R----~---~V~k-~D~N~~GY~N~~T~KS~~F~~D~~v~tGSD~~~i~~WklP~~~ds~G~~---------~----- 332 (609)
T KOG4227|consen 276 -QR----C---FVLK-SDHNPNGYCNIKTIKSMTFIDDYTVATGSDHWGIHIWKLPRANDSYGFT---------Q----- 332 (609)
T ss_pred -cc----c---eeEe-ccCCCCcceeeeeeeeeeeecceeeeccCcccceEEEecCCCccccCcc---------c-----
Confidence 11 0 1111 112 2246677887 5668899999999999885432 00000 0
Q ss_pred cEEEEEcCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEEEc-CCceEEEEEE
Q psy12614 354 QHVLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYST-ESCVRLHSLD 432 (708)
Q Consensus 354 ~~l~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~-d~~i~i~~~~ 432 (708)
.|++...+ +..---.+.+.+..+|.+-+..+.|+|...+|+++. .+.++||.--
T Consensus 333 ------------------------IG~~~~~~-~~~~~i~~~~~VLrGHRSv~NQVRF~~H~~~l~SSGVE~~~KlWS~~ 387 (609)
T KOG4227|consen 333 ------------------------IGHDEEEM-PSEIFIEKELTVLRGHRSVPNQVRFSQHNNLLVSSGVENSFKLWSDH 387 (609)
T ss_pred ------------------------cCcchhhC-chhheecceeEEEecccccccceeecCCcceEeccchhhheeccccc
Confidence 00000000 000001123455668888899999999988888744 8999999754
|
|
| >KOG0642|consensus | Back alignment and domain information |
|---|
Probab=99.74 E-value=3.3e-17 Score=155.90 Aligned_cols=247 Identities=16% Similarity=0.201 Sum_probs=190.8
Q ss_pred EEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECCC--------CeEeEEEeecCCceEEEEEecCCCEEEEEeCC
Q psy12614 63 RVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMRR--------LNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQ 132 (708)
Q Consensus 63 ~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~--------~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d 132 (708)
.++..|. ..|+.++|. ...|++++.||+|++|+++. -+++.++.+|.++|.|+++.+++..+.+|+.|
T Consensus 288 ~tl~s~~--d~ir~l~~~~sep~lit~sed~~lk~WnLqk~~~s~~~~~epi~tfraH~gPVl~v~v~~n~~~~ysgg~D 365 (577)
T KOG0642|consen 288 FTLRSHD--DCIRALAFHPSEPVLITASEDGTLKLWNLQKAKKSAEKDVEPILTFRAHEGPVLCVVVPSNGEHCYSGGID 365 (577)
T ss_pred eeeecch--hhhhhhhcCCCCCeEEEeccccchhhhhhcccCCccccceeeeEEEecccCceEEEEecCCceEEEeeccC
Confidence 3667788 899999998 88999999999999999943 24788999999999999999999999999999
Q ss_pred CcEEEEEccCCc--------EEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCc
Q psy12614 133 GHINLFQISDEG--------LLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKN 203 (708)
Q Consensus 133 ~~i~iwd~~~~~--------~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~ 203 (708)
|+|+.|++.... ......+.||.+.|..+++|+....|++++.| +++.|+...... ..+... ...
T Consensus 366 g~I~~w~~p~n~dp~ds~dp~vl~~~l~Ghtdavw~l~~s~~~~~Llscs~DgTvr~w~~~~~~~-~~f~~~-----~e~ 439 (577)
T KOG0642|consen 366 GTIRCWNLPPNQDPDDSYDPSVLSGTLLGHTDAVWLLALSSTKDRLLSCSSDGTVRLWEPTEESP-CTFGEP-----KEH 439 (577)
T ss_pred ceeeeeccCCCCCcccccCcchhccceeccccceeeeeecccccceeeecCCceEEeeccCCcCc-cccCCc-----ccc
Confidence 999999654211 11235678999999999999999999999999 999999876655 333222 113
Q ss_pred eeEEEEEEccCC--EEEEEcCCCcEEEEeCCCCeeEEEeec-------cccCeEEEEEeCCCCEEEEEecCCeEEEEEcc
Q psy12614 204 TAVWCVAFCADF--TIITGDSGGFVRFWDGKTGVQWSDVKT-------HKKDILALTVSEDENYLYCAGVDPTVVCFQRT 274 (708)
Q Consensus 204 ~~v~~~~~~~~~--~l~~~~~dg~i~~wd~~~~~~~~~~~~-------~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~ 274 (708)
.....+.+.... ..++....+.-.+++.+.+..+..+.. ....+..+...|.+...+++..|+.|+++|..
T Consensus 440 g~Plsvd~~ss~~a~~~~s~~~~~~~~~~~ev~s~~~~~~s~~~~~~~~~~~in~vVs~~~~~~~~~~hed~~Ir~~dn~ 519 (577)
T KOG0642|consen 440 GYPLSVDRTSSRPAHSLASFRFGYTSIDDMEVVSDLLIFESSASPGPRRYPQINKVVSHPTADITFTAHEDRSIRFFDNK 519 (577)
T ss_pred CCcceEeeccchhHhhhhhcccccccchhhhhhhheeeccccCCCcccccCccceEEecCCCCeeEecccCCceeccccc
Confidence 344555554332 122233334444445554444444432 12356678888999999999999999999999
Q ss_pred CCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEEEcCCCeEEEEeCCCCc
Q psy12614 275 RKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSGGLDSYLSLSYYPPKT 333 (708)
Q Consensus 275 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~~~ 333 (708)
+ ++ .+.....|...++++++. |.+|++++.|+.+++|.+..+.
T Consensus 520 ~--------~~--------~l~s~~a~~~svtslai~~ng~~l~s~s~d~sv~l~kld~k~ 564 (577)
T KOG0642|consen 520 T--------GK--------ILHSMVAHKDSVTSLAIDPNGPYLMSGSHDGSVRLWKLDVKT 564 (577)
T ss_pred c--------cc--------cchheeeccceecceeecCCCceEEeecCCceeehhhccchh
Confidence 9 87 788888999999999999 9999999999999999987655
|
|
| >KOG2110|consensus | Back alignment and domain information |
|---|
Probab=99.74 E-value=4.3e-15 Score=134.33 Aligned_cols=234 Identities=15% Similarity=0.241 Sum_probs=176.9
Q ss_pred cEEEEEEcCCCCEEEEEeCC--CcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEeCCEEEEEcCCCcEEEEECCCCeEeE
Q psy12614 28 VINCIACEPKSSRLAVSRAD--QSIEIWDISETPHVDRVFIGDPLSNSIECLTWFNDRLFSGGLQGFVNEYDMRRLNIKS 105 (708)
Q Consensus 28 ~v~~~~~s~~~~~la~~~~d--g~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~~~~l~s~~~d~~i~vwd~~~~~~~~ 105 (708)
.|.-+-||. .+||..+.+ ..+++.++..+..+....- ..+|.++.++.++|+++-.+. |.|||+.+.+.++
T Consensus 48 ~IvEmLFSS--SLvaiV~~~qpr~Lkv~~~Kk~~~ICe~~f----pt~IL~VrmNr~RLvV~Lee~-IyIydI~~MklLh 120 (391)
T KOG2110|consen 48 SIVEMLFSS--SLVAIVSIKQPRKLKVVHFKKKTTICEIFF----PTSILAVRMNRKRLVVCLEES-IYIYDIKDMKLLH 120 (391)
T ss_pred EEEEeeccc--ceeEEEecCCCceEEEEEcccCceEEEEec----CCceEEEEEccceEEEEEccc-EEEEecccceeeh
Confidence 455555663 466665543 3489999988776653332 367999999977887777665 9999999999998
Q ss_pred EEee---cCCceEEEEEecCCCEEEEE--eCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC--eE
Q psy12614 106 STAV---TSGTCWCLSVHKKKRLLAAG--TEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA--AV 178 (708)
Q Consensus 106 ~~~~---~~~~v~~~~~s~~~~~la~~--~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d--~i 178 (708)
++.. +...+.++++++.+.+||.= ...|.|.+||..+-+.. ..+..|++.+.+++|+++|.+||+++.. .|
T Consensus 121 TI~t~~~n~~gl~AlS~n~~n~ylAyp~s~t~GdV~l~d~~nl~~v--~~I~aH~~~lAalafs~~G~llATASeKGTVI 198 (391)
T KOG2110|consen 121 TIETTPPNPKGLCALSPNNANCYLAYPGSTTSGDVVLFDTINLQPV--NTINAHKGPLAALAFSPDGTLLATASEKGTVI 198 (391)
T ss_pred hhhccCCCccceEeeccCCCCceEEecCCCCCceEEEEEcccceee--eEEEecCCceeEEEECCCCCEEEEeccCceEE
Confidence 8873 45567777777788899863 33689999999988777 7888999999999999999999999988 79
Q ss_pred EEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCee--E------------------
Q psy12614 179 RVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQ--W------------------ 237 (708)
Q Consensus 179 ~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~--~------------------ 237 (708)
+|+.+.+|+.+.++..+. ....|.+++|+|+++ |.+.+..++|++|.++.-.. .
T Consensus 199 RVf~v~~G~kl~eFRRG~-----~~~~IySL~Fs~ds~~L~~sS~TeTVHiFKL~~~~~~~~~~p~~~~~~~~~~sk~~~ 273 (391)
T KOG2110|consen 199 RVFSVPEGQKLYEFRRGT-----YPVSIYSLSFSPDSQFLAASSNTETVHIFKLEKVSNNPPESPTAGTSWFGKVSKAAT 273 (391)
T ss_pred EEEEcCCccEeeeeeCCc-----eeeEEEEEEECCCCCeEEEecCCCeEEEEEecccccCCCCCCCCCCcccchhhhhhh
Confidence 999999999999998873 367799999999998 66777789999998753210 0
Q ss_pred E-----------------Eeecccc---CeEEEEEeCCCCEEEEEecCCeEEEEEccC
Q psy12614 238 S-----------------DVKTHKK---DILALTVSEDENYLYCAGVDPTVVCFQRTR 275 (708)
Q Consensus 238 ~-----------------~~~~~~~---~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~ 275 (708)
. +.+.... .+..+.-.+...++..++.||.++.|.+..
T Consensus 274 sylps~V~~~~~~~R~FAt~~l~~s~~~~~~~l~~~~~~~~v~vas~dG~~y~y~l~~ 331 (391)
T KOG2110|consen 274 SYLPSQVSSVLDQSRKFATAKLPESGRKNICSLSSIQKIPRVLVASYDGHLYSYRLPP 331 (391)
T ss_pred hhcchhhhhhhhhccceeEEEccCCCccceEEeeccCCCCEEEEEEcCCeEEEEEcCC
Confidence 0 0000111 222222234668889999999999999876
|
|
| >KOG1517|consensus | Back alignment and domain information |
|---|
Probab=99.74 E-value=4.5e-16 Score=158.74 Aligned_cols=296 Identities=14% Similarity=0.191 Sum_probs=205.6
Q ss_pred eeccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe----CCEEEEEcCCCcEEE
Q psy12614 20 KFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF----NDRLFSGGLQGFVNE 95 (708)
Q Consensus 20 ~~~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~----~~~l~s~~~d~~i~v 95 (708)
++..+.+..-..+.|+|-...++++.+.-.|.|||.+.++.+...-.+......|+.+.+- ...+++|+.||.|+|
T Consensus 1058 ~~~~~n~~~pk~~~~hpf~p~i~~ad~r~~i~vwd~e~~~~l~~F~n~~~~~t~Vs~l~liNe~D~aLlLtas~dGvIRI 1137 (1387)
T KOG1517|consen 1058 KFMTGNNQPPKTLKFHPFEPQIAAADDRERIRVWDWEKGRLLNGFDNGAFPDTRVSDLELINEQDDALLLTASSDGVIRI 1137 (1387)
T ss_pred HHHhcCCCCCceeeecCCCceeEEcCCcceEEEEecccCceeccccCCCCCCCccceeeeecccchhheeeeccCceEEE
Confidence 4566667778889999999999999877799999999998776333333334679999998 568899999999999
Q ss_pred EEC-CC----CeEeEEEeec-------CCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEE
Q psy12614 96 YDM-RR----LNIKSSTAVT-------SGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAW 163 (708)
Q Consensus 96 wd~-~~----~~~~~~~~~~-------~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~ 163 (708)
|+- .. .+.+....+- .+.=.-++|.....+|.++++-..|+|||......... ...+....|+++.-
T Consensus 1138 wk~y~~~~~~~eLVTaw~~Ls~~~~~~r~~~~v~dWqQ~~G~Ll~tGd~r~IRIWDa~~E~~~~d-iP~~s~t~vTaLS~ 1216 (1387)
T KOG1517|consen 1138 WKDYADKWKKPELVTAWSSLSDQLPGARGTGLVVDWQQQSGHLLVTGDVRSIRIWDAHKEQVVAD-IPYGSSTLVTALSA 1216 (1387)
T ss_pred ecccccccCCceeEEeeccccccCccCCCCCeeeehhhhCCeEEecCCeeEEEEEecccceeEee-cccCCCccceeecc
Confidence 962 22 2233222211 11112356777667777777788999999998776632 23334556777754
Q ss_pred C-CCCCEEEEecCC-eEEEEEcCCCce---EEEEEecccCCCCCceeEEEEEEccCC--EEEEEcCCCcEEEEeCCCCee
Q psy12614 164 H-SSGDYLVTGCAA-AVRVWDIHKGHA---IHKMSLDKSSKFSKNTAVWCVAFCADF--TIITGDSGGFVRFWDGKTGVQ 236 (708)
Q Consensus 164 s-~d~~~l~~~~~d-~i~iwd~~~~~~---~~~~~~~~~~~~~~~~~v~~~~~~~~~--~l~~~~~dg~i~~wd~~~~~~ 236 (708)
+ +.|+.+++|..| .|++||.+.... +.....+ ....+|..+.+.+.| .+++|+.+|.|++||++....
T Consensus 1217 ~~~~gn~i~AGfaDGsvRvyD~R~a~~ds~v~~~R~h-----~~~~~Iv~~slq~~G~~elvSgs~~G~I~~~DlR~~~~ 1291 (1387)
T KOG1517|consen 1217 DLVHGNIIAAGFADGSVRVYDRRMAPPDSLVCVYREH-----NDVEPIVHLSLQRQGLGELVSGSQDGDIQLLDLRMSSK 1291 (1387)
T ss_pred cccCCceEEEeecCCceEEeecccCCccccceeeccc-----CCcccceeEEeecCCCcceeeeccCCeEEEEecccCcc
Confidence 3 346999999999 999999875433 3333322 112339999999877 599999999999999987422
Q ss_pred EE--Eeeccc--c-CeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe
Q psy12614 237 WS--DVKTHK--K-DILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH 311 (708)
Q Consensus 237 ~~--~~~~~~--~-~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~ 311 (708)
.. .+..|- + ..+++...+....+|+|+. +.|.||++.. .+ ....+. ....+....+.+.+++|+
T Consensus 1292 e~~~~iv~~~~yGs~lTal~VH~hapiiAsGs~-q~ikIy~~~G--------~~-l~~~k~-n~~F~~q~~gs~scL~FH 1360 (1387)
T KOG1517|consen 1292 ETFLTIVAHWEYGSALTALTVHEHAPIIASGSA-QLIKIYSLSG--------EQ-LNIIKY-NPGFMGQRIGSVSCLAFH 1360 (1387)
T ss_pred cccceeeeccccCccceeeeeccCCCeeeecCc-ceEEEEecCh--------hh-hccccc-CcccccCcCCCcceeeec
Confidence 22 222222 3 5899999999999999998 9999999986 21 000000 011112223567899999
Q ss_pred --CCEEEEEcCCCeEEEEeCCCC
Q psy12614 312 --GNRLYSGGLDSYLSLSYYPPK 332 (708)
Q Consensus 312 --~~~l~s~~~d~~i~iw~~~~~ 332 (708)
.-+++.|+.|.+|.+|.....
T Consensus 1361 P~~~llAaG~~Ds~V~iYs~~k~ 1383 (1387)
T KOG1517|consen 1361 PHRLLLAAGSADSTVSIYSCEKP 1383 (1387)
T ss_pred chhHhhhhccCCceEEEeecCCc
Confidence 667888999999999987654
|
|
| >KOG1240|consensus | Back alignment and domain information |
|---|
Probab=99.73 E-value=9e-16 Score=159.13 Aligned_cols=257 Identities=14% Similarity=0.180 Sum_probs=184.7
Q ss_pred ceeeeeeeeccCCCCcEEEEEEcCCC-CEEEEEeCCCcEEEEeCCC--C--CeEEEEEecCCCCCcEEEEEEe--CCEEE
Q psy12614 13 TYGVHNIKFYAPEPKVINCIACEPKS-SRLAVSRADQSIEIWDISE--T--PHVDRVFIGDPLSNSIECLTWF--NDRLF 85 (708)
Q Consensus 13 ~~~~~~~~~~~~h~~~v~~~~~s~~~-~~la~~~~dg~v~iwd~~~--~--~~~~~~~~~h~~~~~v~~l~~~--~~~l~ 85 (708)
..+...+..+..|...|..++.++.. .++++|+.||+|++||... + ...+..+.-+..+.++.++... ++.+|
T Consensus 1035 ~p~G~lVAhL~Ehs~~v~k~a~s~~~~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~~~~~~~A 1114 (1431)
T KOG1240|consen 1035 NPRGILVAHLHEHSSAVIKLAVSSEHTSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMCGNGDQFA 1114 (1431)
T ss_pred CccceEeehhhhccccccceeecCCCCceEEEecCCceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEeccCCCeEE
Confidence 55566677789999999999998765 9999999999999999975 1 1222233333224788888888 99999
Q ss_pred EEcCCCcEEEEECCCC--e-----EeEEEe--ecCCceEEEEEec-CCC-EEEEEeCCCcEEEEEccCCcEEEEEecccc
Q psy12614 86 SGGLQGFVNEYDMRRL--N-----IKSSTA--VTSGTCWCLSVHK-KKR-LLAAGTEQGHINLFQISDEGLLYEKLLDRQ 154 (708)
Q Consensus 86 s~~~d~~i~vwd~~~~--~-----~~~~~~--~~~~~v~~~~~s~-~~~-~la~~~~d~~i~iwd~~~~~~~~~~~~~~~ 154 (708)
.++.||.|++.+++-. + +.+... ..+..|..-+|.. ++. .|+.+..-+.|..||+..............
T Consensus 1115 v~t~DG~v~~~~id~~~~~~~~~~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D~r~~~~~w~lk~~~~ 1194 (1431)
T KOG1240|consen 1115 VSTKDGSVRVLRIDHYNVSKRVATQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWDTRMRHDAWRLKNQLR 1194 (1431)
T ss_pred EEcCCCeEEEEEccccccccceeeeeecccccCCCceEEeecccccccceeEEEEEeccceEEecchhhhhHHhhhcCcc
Confidence 9999999999998762 1 122222 2222333344443 233 677888899999999987765543445555
Q ss_pred cccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccC---C-E-EEEEc-CCCcEE
Q psy12614 155 QGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCAD---F-T-IITGD-SGGFVR 227 (708)
Q Consensus 155 ~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~-~-l~~~~-~dg~i~ 227 (708)
.|.|++++.+|.+..+++|+.. .+.+||++-+..+.....+. ..++..+...|- . - +.++. ..+.|.
T Consensus 1195 hG~vTSi~idp~~~WlviGts~G~l~lWDLRF~~~i~sw~~P~------~~~i~~v~~~~~~~~~S~~vs~~~~~~nevs 1268 (1431)
T KOG1240|consen 1195 HGLVTSIVIDPWCNWLVIGTSRGQLVLWDLRFRVPILSWEHPA------RAPIRHVWLCPTYPQESVSVSAGSSSNNEVS 1268 (1431)
T ss_pred ccceeEEEecCCceEEEEecCCceEEEEEeecCceeecccCcc------cCCcceEEeeccCCCCceEEEecccCCCcee
Confidence 7889999999999999999998 99999999998888887653 567777766552 2 2 44444 578999
Q ss_pred EEeCCCCeeEEEeecc-------------------ccCeEEEEEeCCCCEEEEEecCCeEEEEEccC
Q psy12614 228 FWDGKTGVQWSDVKTH-------------------KKDILALTVSEDENYLYCAGVDPTVVCFQRTR 275 (708)
Q Consensus 228 ~wd~~~~~~~~~~~~~-------------------~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~ 275 (708)
+|++.+|.+...+... .-......+...+..+.+|+.|..|+.||...
T Consensus 1269 ~wn~~~g~~~~vl~~s~~~p~ls~~~Ps~~~~kp~~~~~~~~~~~~~~~~~ltggsd~kIR~wD~~~ 1335 (1431)
T KOG1240|consen 1269 TWNMETGLRQTVLWASDGAPILSYALPSNDARKPDSLAGISCGVCEKNGFLLTGGSDMKIRKWDPTR 1335 (1431)
T ss_pred eeecccCcceEEEEcCCCCcchhhhcccccCCCCCcccceeeecccCCceeeecCCccceeeccCCC
Confidence 9999998665554321 11112233444456889999999999999876
|
|
| >KOG0771|consensus | Back alignment and domain information |
|---|
Probab=99.73 E-value=5.2e-17 Score=149.46 Aligned_cols=195 Identities=15% Similarity=0.166 Sum_probs=153.9
Q ss_pred EEEEEe--CCEEEEEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecc
Q psy12614 75 ECLTWF--NDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLD 152 (708)
Q Consensus 75 ~~l~~~--~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~ 152 (708)
..++|+ |..|++++.||++|+|++.+...+.....|.+.|.++.|+|||++|++.+.| ..+||+.+++..+....-.
T Consensus 148 k~vaf~~~gs~latgg~dg~lRv~~~Ps~~t~l~e~~~~~eV~DL~FS~dgk~lasig~d-~~~VW~~~~g~~~a~~t~~ 226 (398)
T KOG0771|consen 148 KVVAFNGDGSKLATGGTDGTLRVWEWPSMLTILEEIAHHAEVKDLDFSPDGKFLASIGAD-SARVWSVNTGAALARKTPF 226 (398)
T ss_pred eEEEEcCCCCEeeeccccceEEEEecCcchhhhhhHhhcCccccceeCCCCcEEEEecCC-ceEEEEeccCchhhhcCCc
Confidence 678888 7999999999999999999999888889999999999999999999999999 8999999999665333333
Q ss_pred cccccEEEEEECCCC---CEEEEe--cCC-eEEEEEcCCCce---EEEEEecccCCCCCceeEEEEEEccCCE-EEEEcC
Q psy12614 153 RQQGRILCTAWHSSG---DYLVTG--CAA-AVRVWDIHKGHA---IHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDS 222 (708)
Q Consensus 153 ~~~~~v~~~~~s~d~---~~l~~~--~~d-~i~iwd~~~~~~---~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~ 222 (708)
........+.|+.|+ .+.+.+ ... .|+.|++...+. ++..+.- .....|.+++.++||+ ++.|+.
T Consensus 227 ~k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l~~~~~~-----~~~~siSsl~VS~dGkf~AlGT~ 301 (398)
T KOG0771|consen 227 SKDEMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSGSNFLRLRKKI-----KRFKSISSLAVSDDGKFLALGTM 301 (398)
T ss_pred ccchhhhhceecccCCCceEEEEEecCCCCceeEEEeeeeccccccchhhhh-----hccCcceeEEEcCCCcEEEEecc
Confidence 445567788898877 333332 233 676666542211 1111110 2256799999999998 778999
Q ss_pred CCcEEEEeCCCCeeEEEe-eccccCeEEEEEeCCCCEEEEEecCCeEEEEEccC
Q psy12614 223 GGFVRFWDGKTGVQWSDV-KTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTR 275 (708)
Q Consensus 223 dg~i~~wd~~~~~~~~~~-~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~ 275 (708)
+|.|.+++..+.+.++.. +.|...|+.+.|+||.+++++.+.+..+.+..+.-
T Consensus 302 dGsVai~~~~~lq~~~~vk~aH~~~VT~ltF~Pdsr~~~svSs~~~~~v~~l~v 355 (398)
T KOG0771|consen 302 DGSVAIYDAKSLQRLQYVKEAHLGFVTGLTFSPDSRYLASVSSDNEAAVTKLAV 355 (398)
T ss_pred CCcEEEEEeceeeeeEeehhhheeeeeeEEEcCCcCcccccccCCceeEEEEee
Confidence 999999999988877665 46999999999999999999999999888887765
|
|
| >KOG1310|consensus | Back alignment and domain information |
|---|
Probab=99.73 E-value=6.1e-16 Score=146.56 Aligned_cols=170 Identities=19% Similarity=0.341 Sum_probs=133.5
Q ss_pred EecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCC---EEEEEcCCC
Q psy12614 149 KLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADF---TIITGDSGG 224 (708)
Q Consensus 149 ~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---~l~~~~~dg 224 (708)
..+.+|.+-|.++.|+.||.+|++|+.| .+.|||.-..+.+..+..+ |...|.++.|.|.. .+++|..|.
T Consensus 44 ~eL~GH~GCVN~LeWn~dG~lL~SGSDD~r~ivWd~~~~KllhsI~Tg------HtaNIFsvKFvP~tnnriv~sgAgDk 117 (758)
T KOG1310|consen 44 AELTGHTGCVNCLEWNADGELLASGSDDTRLIVWDPFEYKLLHSISTG------HTANIFSVKFVPYTNNRIVLSGAGDK 117 (758)
T ss_pred hhhccccceecceeecCCCCEEeecCCcceEEeecchhcceeeeeecc------cccceeEEeeeccCCCeEEEeccCcc
Confidence 6789999999999999999999999999 9999999988888888775 48889999999944 388999999
Q ss_pred cEEEEeCCCC----------eeEEEeeccccCeEEEEEeCCC-CEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceE
Q psy12614 225 FVRFWDGKTG----------VQWSDVKTHKKDILALTVSEDE-NYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWV 293 (708)
Q Consensus 225 ~i~~wd~~~~----------~~~~~~~~~~~~i~~~~~s~~~-~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~ 293 (708)
.|+++|+... +....+..|...|..++..|++ +.+.+++.||+|+.+|++. +..|...+. -..
T Consensus 118 ~i~lfdl~~~~~~~~d~~~~~~~~~~~cht~rVKria~~p~~PhtfwsasEDGtirQyDiRE-ph~c~p~~~-----~~~ 191 (758)
T KOG1310|consen 118 LIKLFDLDSSKEGGMDHGMEETTRCWSCHTDRVKRIATAPNGPHTFWSASEDGTIRQYDIRE-PHVCNPDED-----CPS 191 (758)
T ss_pred eEEEEecccccccccccCccchhhhhhhhhhhhhheecCCCCCceEEEecCCcceeeecccC-CccCCcccc-----ccH
Confidence 9999999741 2344567799999999999999 7888999999999999986 333333321 000
Q ss_pred EeEEEeccccceEEEEEe---CCEEEEEcCCCeEEEEeCC
Q psy12614 294 RSVNRVIHEGDVKSLALH---GNRLYSGGLDSYLSLSYYP 330 (708)
Q Consensus 294 ~~~~~~~~~~~v~~l~~~---~~~l~s~~~d~~i~iw~~~ 330 (708)
....+...--...++..+ ..+|+.|+.|...++||.+
T Consensus 192 ~l~ny~~~lielk~ltisp~rp~~laVGgsdpfarLYD~R 231 (758)
T KOG1310|consen 192 ILVNYNPQLIELKCLTISPSRPYYLAVGGSDPFARLYDRR 231 (758)
T ss_pred HHHHhchhhheeeeeeecCCCCceEEecCCCchhhhhhhh
Confidence 011111112334566666 7899999999999999953
|
|
| >KOG1334|consensus | Back alignment and domain information |
|---|
Probab=99.73 E-value=2e-17 Score=154.41 Aligned_cols=292 Identities=12% Similarity=0.125 Sum_probs=222.0
Q ss_pred eccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe----CCEEEEEcCCCcEEEE
Q psy12614 21 FYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF----NDRLFSGGLQGFVNEY 96 (708)
Q Consensus 21 ~~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~----~~~l~s~~~d~~i~vw 96 (708)
-+..|++.|+.+.|+..|..|++|+.|..|.+||+..+........||. ..|..-.|. ...+++++.||.+++=
T Consensus 137 kL~~H~GcVntV~FN~~Gd~l~SgSDD~~vv~WdW~~~~~~l~f~SGH~--~NvfQaKFiP~s~d~ti~~~s~dgqvr~s 214 (559)
T KOG1334|consen 137 KLNKHKGCVNTVHFNQRGDVLASGSDDLQVVVWDWVSGSPKLSFESGHC--NNVFQAKFIPFSGDRTIVTSSRDGQVRVS 214 (559)
T ss_pred cccCCCCccceeeecccCceeeccCccceEEeehhhccCcccccccccc--cchhhhhccCCCCCcCceeccccCceeee
Confidence 5789999999999999999999999999999999999888776777898 778777776 6789999999999998
Q ss_pred ECCCCe-E--eEEEeecCCceEEEEEecCCC-EEEEEeCCCcEEEEEccCCcEEEEEeccc-ccc---cEEEEEECCCCC
Q psy12614 97 DMRRLN-I--KSSTAVTSGTCWCLSVHKKKR-LLAAGTEQGHINLFQISDEGLLYEKLLDR-QQG---RILCTAWHSSGD 168 (708)
Q Consensus 97 d~~~~~-~--~~~~~~~~~~v~~~~~s~~~~-~la~~~~d~~i~iwd~~~~~~~~~~~~~~-~~~---~v~~~~~s~d~~ 168 (708)
.+.... + ...+..|.++|.-++.-|+.. .|.+++.|+.+.-+|+..+.......-.. +.. ...+++..|-..
T Consensus 215 ~i~~t~~~e~t~rl~~h~g~vhklav~p~sp~~f~S~geD~~v~~~Dlr~~~pa~~~~cr~~~~~~~v~L~~Ia~~P~nt 294 (559)
T KOG1334|consen 215 EILETGYVENTKRLAPHEGPVHKLAVEPDSPKPFLSCGEDAVVFHIDLRQDVPAEKFVCREADEKERVGLYTIAVDPRNT 294 (559)
T ss_pred eeccccceecceecccccCccceeeecCCCCCcccccccccceeeeeeccCCccceeeeeccCCccceeeeeEecCCCCc
Confidence 765433 2 345668999999999999765 57789999999999998765432222222 222 467888888776
Q ss_pred -EEEEecCC-eEEEEEcCCCce------EEEEEecccCCCCCceeEEEEEEccCC-EEEEEcCCCcEEEEeCCC--C---
Q psy12614 169 -YLVTGCAA-AVRVWDIHKGHA------IHKMSLDKSSKFSKNTAVWCVAFCADF-TIITGDSGGFVRFWDGKT--G--- 234 (708)
Q Consensus 169 -~l~~~~~d-~i~iwd~~~~~~------~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~~~~~dg~i~~wd~~~--~--- 234 (708)
.+++++.| .+++||.+.-.. +.++...+... .....|++++|+.++ .+++...|-.|++++-.- |
T Consensus 295 ~~faVgG~dqf~RvYD~R~~~~e~~n~~~~~f~p~hl~~-d~~v~ITgl~Ysh~~sElLaSYnDe~IYLF~~~~~~G~~p 373 (559)
T KOG1334|consen 295 NEFAVGGSDQFARVYDQRRIDKEENNGVLDKFCPHHLVE-DDPVNITGLVYSHDGSELLASYNDEDIYLFNKSMGDGSEP 373 (559)
T ss_pred cccccCChhhhhhhhcccchhhccccchhhhcCCccccc-cCcccceeEEecCCccceeeeecccceEEeccccccCCCC
Confidence 78889999 999999764221 22222222111 225679999999877 488888888999995432 2
Q ss_pred -------eeEE-Eeecccc--CeEEEEE-eCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEecccc
Q psy12614 235 -------VQWS-DVKTHKK--DILALTV-SEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEG 303 (708)
Q Consensus 235 -------~~~~-~~~~~~~--~i~~~~~-s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 303 (708)
..+. .+++|.. .|.++-| -|...++++|+.=|.|.||+-.+ ++ .+..+.+...
T Consensus 374 ~~~s~~~~~~k~vYKGHrN~~TVKgVNFfGPrsEyVvSGSDCGhIFiW~K~t--------~e--------ii~~MegDr~ 437 (559)
T KOG1334|consen 374 DPSSPREQYVKRVYKGHRNSRTVKGVNFFGPRSEYVVSGSDCGHIFIWDKKT--------GE--------IIRFMEGDRH 437 (559)
T ss_pred CCCcchhhccchhhcccccccccceeeeccCccceEEecCccceEEEEecch--------hH--------HHHHhhcccc
Confidence 1222 2677754 4666665 57788999999999999999998 65 5566666666
Q ss_pred ceEEEEEe--CCEEEEEcCCCeEEEEeCCC
Q psy12614 304 DVKSLALH--GNRLYSGGLDSYLSLSYYPP 331 (708)
Q Consensus 304 ~v~~l~~~--~~~l~s~~~d~~i~iw~~~~ 331 (708)
-|.||.-+ -..|++.|.|..|+||...+
T Consensus 438 VVNCLEpHP~~PvLAsSGid~DVKIWTP~~ 467 (559)
T KOG1334|consen 438 VVNCLEPHPHLPVLASSGIDHDVKIWTPLT 467 (559)
T ss_pred eEeccCCCCCCchhhccCCccceeeecCCc
Confidence 78888877 78999999999999998744
|
|
| >KOG1517|consensus | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.2e-15 Score=155.58 Aligned_cols=285 Identities=15% Similarity=0.209 Sum_probs=201.3
Q ss_pred cEEEEEEe--CCEEEEEcCCCcEEEEECCCCeEeEEEeec---CCceEEEEEec--CCCEEEEEeCCCcEEEEEcc-C--
Q psy12614 73 SIECLTWF--NDRLFSGGLQGFVNEYDMRRLNIKSSTAVT---SGTCWCLSVHK--KKRLLAAGTEQGHINLFQIS-D-- 142 (708)
Q Consensus 73 ~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~---~~~v~~~~~s~--~~~~la~~~~d~~i~iwd~~-~-- 142 (708)
.-..+.|+ ...++++...-.|++||.+.++.+..+..+ ...|+.+.+-. |..++.+|+.||.|+||+-- .
T Consensus 1066 ~pk~~~~hpf~p~i~~ad~r~~i~vwd~e~~~~l~~F~n~~~~~t~Vs~l~liNe~D~aLlLtas~dGvIRIwk~y~~~~ 1145 (1387)
T KOG1517|consen 1066 PPKTLKFHPFEPQIAAADDRERIRVWDWEKGRLLNGFDNGAFPDTRVSDLELINEQDDALLLTASSDGVIRIWKDYADKW 1145 (1387)
T ss_pred CCceeeecCCCceeEEcCCcceEEEEecccCceeccccCCCCCCCccceeeeecccchhheeeeccCceEEEeccccccc
Confidence 34556666 778888888889999999999998887743 35688888865 45688999999999999743 2
Q ss_pred CcEEEEEeccc-------ccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEcc-
Q psy12614 143 EGLLYEKLLDR-------QQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCA- 213 (708)
Q Consensus 143 ~~~~~~~~~~~-------~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~- 213 (708)
++........+ ..+.-.-+.|.....+|++++.- .|+|||.........+.... +..++++.-..
T Consensus 1146 ~~~eLVTaw~~Ls~~~~~~r~~~~v~dWqQ~~G~Ll~tGd~r~IRIWDa~~E~~~~diP~~s------~t~vTaLS~~~~ 1219 (1387)
T KOG1517|consen 1146 KKPELVTAWSSLSDQLPGARGTGLVVDWQQQSGHLLVTGDVRSIRIWDAHKEQVVADIPYGS------STLVTALSADLV 1219 (1387)
T ss_pred CCceeEEeeccccccCccCCCCCeeeehhhhCCeEEecCCeeEEEEEecccceeEeecccCC------Cccceeeccccc
Confidence 11111122211 11222445676666666666656 99999999999888887754 67778775543
Q ss_pred CC-EEEEEcCCCcEEEEeCCCC---eeEEEeeccccC--eEEEEEeCCCC-EEEEEecCCeEEEEEccCCcccccCCCCC
Q psy12614 214 DF-TIITGDSGGFVRFWDGKTG---VQWSDVKTHKKD--ILALTVSEDEN-YLYCAGVDPTVVCFQRTRKPQVCSTSGPE 286 (708)
Q Consensus 214 ~~-~l~~~~~dg~i~~wd~~~~---~~~~~~~~~~~~--i~~~~~s~~~~-~l~~~~~dg~i~iw~~~~~~~~~~~~g~~ 286 (708)
.| .+++|..||.|++||.+.. ..+...+.|+.. |..+.+.+.|- .|++|+.||.|++||++. ..
T Consensus 1220 ~gn~i~AGfaDGsvRvyD~R~a~~ds~v~~~R~h~~~~~Iv~~slq~~G~~elvSgs~~G~I~~~DlR~--------~~- 1290 (1387)
T KOG1517|consen 1220 HGNIIAAGFADGSVRVYDRRMAPPDSLVCVYREHNDVEPIVHLSLQRQGLGELVSGSQDGDIQLLDLRM--------SS- 1290 (1387)
T ss_pred CCceEEEeecCCceEEeecccCCccccceeecccCCcccceeEEeecCCCcceeeeccCCeEEEEeccc--------Cc-
Confidence 33 4899999999999998754 346667778877 99999999774 499999999999999997 21
Q ss_pred CCCcceEEeEEEecc---ccceEEEEEe--CCEEEEEcCCCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEEEcC
Q psy12614 287 QGSSVWVRSVNRVIH---EGDVKSLALH--GNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYT 361 (708)
Q Consensus 287 ~~~~~~~~~~~~~~~---~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~ 361 (708)
.. .......| .+..+++..+ ...+++|+. +.|+||++.+..+..+.
T Consensus 1291 --~e---~~~~iv~~~~yGs~lTal~VH~hapiiAsGs~-q~ikIy~~~G~~l~~~k----------------------- 1341 (1387)
T KOG1517|consen 1291 --KE---TFLTIVAHWEYGSALTALTVHEHAPIIASGSA-QLIKIYSLSGEQLNIIK----------------------- 1341 (1387)
T ss_pred --cc---ccceeeeccccCccceeeeeccCCCeeeecCc-ceEEEEecChhhhcccc-----------------------
Confidence 00 11111222 2358888888 778888887 99999999776544333
Q ss_pred CeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEEEc-CCceEEEEEEe
Q psy12614 362 SHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYST-ESCVRLHSLDL 433 (708)
Q Consensus 362 ~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~-d~~i~i~~~~~ 433 (708)
+ .. .......+.+.|++|+|..-.+|+|. |.+|.||....
T Consensus 1342 -----~--n~-------------------------~F~~q~~gs~scL~FHP~~~llAaG~~Ds~V~iYs~~k 1382 (1387)
T KOG1517|consen 1342 -----Y--NP-------------------------GFMGQRIGSVSCLAFHPHRLLLAAGSADSTVSIYSCEK 1382 (1387)
T ss_pred -----c--Cc-------------------------ccccCcCCCcceeeecchhHhhhhccCCceEEEeecCC
Confidence 0 00 00011234568999999998888876 99999998764
|
|
| >PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [] | Back alignment and domain information |
|---|
Probab=99.72 E-value=4.5e-11 Score=130.72 Aligned_cols=515 Identities=14% Similarity=0.131 Sum_probs=302.1
Q ss_pred CcEEEEEEcCCCCEEEE--EeCCC--cEEEEeCCCCCeEE--EEEec----CCCCCcEEEEEEe--CCEEEEEcCCCcEE
Q psy12614 27 KVINCIACEPKSSRLAV--SRADQ--SIEIWDISETPHVD--RVFIG----DPLSNSIECLTWF--NDRLFSGGLQGFVN 94 (708)
Q Consensus 27 ~~v~~~~~s~~~~~la~--~~~dg--~v~iwd~~~~~~~~--~~~~~----h~~~~~v~~l~~~--~~~l~s~~~d~~i~ 94 (708)
..+...+|.+..+.+.. +.... .|.+.......... ..+.. .. ...|.++.|. ...++.+..+|.|.
T Consensus 22 ~~~~~~~~d~~sd~i~~~~~~~~~~~~i~~~~~~~~~~~~~l~s~~~~~~~~~-~~~ivs~~yl~d~~~l~~~~~~Gdi~ 100 (928)
T PF04762_consen 22 LPITATAFDSDSDSIYFVLGPNEIDYVIELDRFSQDGSVEVLASWDAPLPDDP-NDKIVSFQYLADSESLCIALASGDII 100 (928)
T ss_pred cccceEEEecCCCeEEEEECCCCcceEEEEEeeccCCceeEEEeccccCCcCC-CCcEEEEEeccCCCcEEEEECCceEE
Confidence 46788888887655443 32222 34444444332111 12221 11 3679999988 77889999999999
Q ss_pred EE----ECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccC-------------Cc--EE------EEE
Q psy12614 95 EY----DMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISD-------------EG--LL------YEK 149 (708)
Q Consensus 95 vw----d~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~-------------~~--~~------~~~ 149 (708)
+. +..+.. +.....-...|.+++||||+..||.++.++++.+.+-.= |+ .+ ...
T Consensus 101 ~~~~~~~~~~~~-~E~VG~vd~GI~a~~WSPD~Ella~vT~~~~l~~mt~~fd~i~E~~l~~~~~~~~~~VsVGWGkKeT 179 (928)
T PF04762_consen 101 LVREDPDPDEDE-IEIVGSVDSGILAASWSPDEELLALVTGEGNLLLMTRDFDPISEVPLDSDDFGESKHVSVGWGKKET 179 (928)
T ss_pred EEEccCCCCCce-eEEEEEEcCcEEEEEECCCcCEEEEEeCCCEEEEEeccceEEEEeecCccccCCCceeeeccCcccC
Confidence 99 544432 223334457899999999999999999998887754310 00 00 000
Q ss_pred eccc------------------------ccccEEEEEECCCCCEEEEecC------C-eEEEEEcCCCceEEEEEecccC
Q psy12614 150 LLDR------------------------QQGRILCTAWHSSGDYLVTGCA------A-AVRVWDIHKGHAIHKMSLDKSS 198 (708)
Q Consensus 150 ~~~~------------------------~~~~v~~~~~s~d~~~l~~~~~------d-~i~iwd~~~~~~~~~~~~~~~~ 198 (708)
.|.| ....-..++|-.||+++|+.+. . .++||+-+ |.....-. .
T Consensus 180 QF~Gs~gK~aa~~~~~p~~~~~d~~~~s~dd~~~~ISWRGDG~yFAVss~~~~~~~~R~iRVy~Re-G~L~stSE-~--- 254 (928)
T PF04762_consen 180 QFHGSAGKAAARQLRDPTVPKVDEGKLSWDDGRVRISWRGDGEYFAVSSVEPETGSRRVIRVYSRE-GELQSTSE-P--- 254 (928)
T ss_pred ccCcchhhhhhhhccCCCCCccccCccccCCCceEEEECCCCcEEEEEEEEcCCCceeEEEEECCC-ceEEeccc-c---
Confidence 1100 2234567889999999997664 3 69999954 65443332 1
Q ss_pred CCCCceeEEEEEEccCCEEEEEcCC----CcEEEEeCCCCeeEEEee----ccccCeEEEEEeCCCCEEEEEecCCeEEE
Q psy12614 199 KFSKNTAVWCVAFCADFTIITGDSG----GFVRFWDGKTGVQWSDVK----THKKDILALTVSEDENYLYCAGVDPTVVC 270 (708)
Q Consensus 199 ~~~~~~~v~~~~~~~~~~l~~~~~d----g~i~~wd~~~~~~~~~~~----~~~~~i~~~~~s~~~~~l~~~~~dg~i~i 270 (708)
..+.-.+++|.|.|.++++... ..|.+|. ++|-.-..+. .....|..+.|++|+..|+....|. |.+
T Consensus 255 ---v~gLe~~l~WrPsG~lIA~~q~~~~~~~VvFfE-rNGLrhgeF~l~~~~~~~~v~~l~Wn~ds~iLAv~~~~~-vqL 329 (928)
T PF04762_consen 255 ---VDGLEGALSWRPSGNLIASSQRLPDRHDVVFFE-RNGLRHGEFTLRFDPEEEKVIELAWNSDSEILAVWLEDR-VQL 329 (928)
T ss_pred ---CCCccCCccCCCCCCEEEEEEEcCCCcEEEEEe-cCCcEeeeEecCCCCCCceeeEEEECCCCCEEEEEecCC-ceE
Confidence 1444567899999986655442 5677887 4554433332 3456899999999999999977654 999
Q ss_pred EEccCCcccccCCCCCCCCcceEEeEEEeccc-cceEEEEEe---CCEEEEEcCCCeEEEEeCCCCceeecCccCCCCce
Q psy12614 271 FQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHE-GDVKSLALH---GNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTP 346 (708)
Q Consensus 271 w~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~v~~l~~~---~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~ 346 (708)
|...+ ..|.....+.... ..+..+.|+ ...|...+.++.+..+++.-.....-
T Consensus 330 Wt~~N--------------YHWYLKqei~~~~~~~~~~~~Wdpe~p~~L~v~t~~g~~~~~~~~~~v~~s~--------- 386 (928)
T PF04762_consen 330 WTRSN--------------YHWYLKQEIRFSSSESVNFVKWDPEKPLRLHVLTSNGQYEIYDFAWDVSRSP--------- 386 (928)
T ss_pred EEeeC--------------CEEEEEEEEEccCCCCCCceEECCCCCCEEEEEecCCcEEEEEEEEEEEecC---------
Confidence 99877 4687777766543 345568898 66777777777776655532111100
Q ss_pred EEEEc-CCcEEEEEcCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEE-EcCC
Q psy12614 347 VSLAK-DIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAY-STES 424 (708)
Q Consensus 347 ~~~s~-~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~-~~d~ 424 (708)
..+| |...+++-.+..+.+-.+.... -|..+..........|.+++|++++..+|+ ..||
T Consensus 387 -~~~~~D~g~vaVIDG~~lllTpf~~a~-----------------VPPPMs~~~l~~~~~v~~vaf~~~~~~~avl~~d~ 448 (928)
T PF04762_consen 387 -GSSPNDNGTVAVIDGNKLLLTPFRRAV-----------------VPPPMSSYELELPSPVNDVAFSPSNSRFAVLTSDG 448 (928)
T ss_pred -CCCccCceEEEEEeCCeEEEecccccC-----------------CCchHhceEEcCCCCcEEEEEeCCCCeEEEEECCC
Confidence 0011 2223333445556665555433 223333333345688999999999887776 6699
Q ss_pred ceEEEEEEecCCcc--eeEEeecCCc------cc--ccceeEEEEEecCCCeEEEEecC-Cc----EEEecCC-CeEEEE
Q psy12614 425 CVRLHSLDLDGDKP--QISRIKNLPA------PL--FKSIFTHVLISADSTLLLAVSLN-GP----LYIIDLS-SLEIKY 488 (708)
Q Consensus 425 ~i~i~~~~~~~~~~--~~~~~~~~~~------~~--~~~~i~~~~~s~d~~~l~~~~~d-g~----i~~~~~~-~~~~~~ 488 (708)
.+.+|......... .......+.. .. ....+.+++|..+...++....+ +. ++++... ......
T Consensus 449 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 528 (928)
T PF04762_consen 449 SLSIYEWDLKNMWSVKPPKLLSSISLDSMDISDSELPLGSLRQLAWLNDDTLLVLSDSDSNQSKIVLVDIDDSENSASVE 528 (928)
T ss_pred CEEEEEecCCCcccccCcchhhhcccccccccccccccccEEEEEEeCCCEEEEEEecCcccceEEEEEeccCCCceeEE
Confidence 99999976532110 0000000111 01 13456778998888877776665 22 5555322 112222
Q ss_pred EecCCCCCccCcceEEEEECCCCcEEEEEecCCeEEEEECCceee---ecCCCCCCceEEEEcCCC--CEEEEEecCCcE
Q psy12614 489 CVDPYKSNLMSDVISLVQMSECKQYIVCADRKSHVVIWKNGQHHA---SLPRYRKPSTAMAIHPTL--STLVTVYSDHRI 563 (708)
Q Consensus 489 ~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~---~~~~~~~~v~~l~~s~d~--~~l~~~~~dg~i 563 (708)
..... ...+..+...++...++.-..+|.+...+...... .++..-..+....+..+. ..++.-+..|.+
T Consensus 529 ~~~~~-----~~~~~~~~~~~~~~~~~~q~~~G~v~~~~~~~~~~~~~~fp~~c~~~~~~~~~~~~~~~~~~GLs~~~~L 603 (928)
T PF04762_consen 529 SSTEV-----DGVVLIISSSPDSGSLYIQTNDGKVFQLSSDGELSQIVKFPQPCPWMEVCQINGSEDKRVLFGLSSNGRL 603 (928)
T ss_pred EEecc-----CceEEEEeeCCCCcEEEEEECCCEEEEeecCCCccccccCCCCCcEEEEEEECCccceeEEEEECCCCEE
Confidence 22221 33555666666665567777899998777763322 333322232333333222 134444555655
Q ss_pred EEEEcCCCCCCchhhhhhccCchhhhcCCCCeeEEEeCCCCCceEEEEcCeeEEEEecC
Q psy12614 564 VEFDLNRKAFTTFSRKLETNHPNEWLSRQLPVLGIEFDPQDSSLIYLMDDSALCVINKN 622 (708)
Q Consensus 564 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~~~~l~~~~~d~~i~~wd~~ 622 (708)
++ ++..+ ...+++..+ .+.+|+.......+++.++.
T Consensus 604 y~----n~~~l-----------------a~~~tSF~v--~~~~Ll~TT~~h~l~fv~L~ 639 (928)
T PF04762_consen 604 YA----NSRLL-----------------ASNCTSFAV--TDSFLLFTTTQHTLKFVHLN 639 (928)
T ss_pred EE----CCEEE-----------------ecCCceEEE--EcCEEEEEecCceEEEEECc
Confidence 54 22221 134555454 46778877778889999998
|
|
| >KOG0290|consensus | Back alignment and domain information |
|---|
Probab=99.72 E-value=7.7e-16 Score=134.28 Aligned_cols=237 Identities=14% Similarity=0.232 Sum_probs=175.0
Q ss_pred cCCCCcEEEEEEcCCC-----CEEEEEeCCCcEEEEeCCCC--Ce-EEEEEecCC---CCCcEEEEEEe---CCEEEEEc
Q psy12614 23 APEPKVINCIACEPKS-----SRLAVSRADQSIEIWDISET--PH-VDRVFIGDP---LSNSIECLTWF---NDRLFSGG 88 (708)
Q Consensus 23 ~~h~~~v~~~~~s~~~-----~~la~~~~dg~v~iwd~~~~--~~-~~~~~~~h~---~~~~v~~l~~~---~~~l~s~~ 88 (708)
..|+-+++.+.|.|+. ++||+.+ | .+++|.+... +. +...+..++ +..++++..|+ -+++.+++
T Consensus 93 fd~~YP~tK~~wiPd~~g~~pdlLATs~-D-~LRlWri~~ee~~~~~~~~L~~~kns~~~aPlTSFDWne~dp~~igtSS 170 (364)
T KOG0290|consen 93 FDHPYPVTKLMWIPDSKGVYPDLLATSS-D-FLRLWRIGDEESRVELQSVLNNNKNSEFCAPLTSFDWNEVDPNLIGTSS 170 (364)
T ss_pred CCCCCCccceEecCCccccCcchhhccc-C-eEEEEeccCcCCceehhhhhccCcccccCCcccccccccCCcceeEeec
Confidence 3688999999999986 3677754 3 7999999842 21 111222211 24799999999 78899999
Q ss_pred CCCcEEEEECCCCe---EeEEEeecCCceEEEEEecCCC-EEEEEeCCCcEEEEEccCCcEEEEEecccc-cccEEEEEE
Q psy12614 89 LQGFVNEYDMRRLN---IKSSTAVTSGTCWCLSVHKKKR-LLAAGTEQGHINLFQISDEGLLYEKLLDRQ-QGRILCTAW 163 (708)
Q Consensus 89 ~d~~i~vwd~~~~~---~~~~~~~~~~~v~~~~~s~~~~-~la~~~~d~~i~iwd~~~~~~~~~~~~~~~-~~~v~~~~~ 163 (708)
-|-+..|||++++. ....+-.|...|..++|...+. .+|+.+.||.+++||++..+-....--.+. ..+...++|
T Consensus 171 iDTTCTiWdie~~~~~~vkTQLIAHDKEV~DIaf~~~s~~~FASvgaDGSvRmFDLR~leHSTIIYE~p~~~~pLlRLsw 250 (364)
T KOG0290|consen 171 IDTTCTIWDIETGVSGTVKTQLIAHDKEVYDIAFLKGSRDVFASVGADGSVRMFDLRSLEHSTIIYEDPSPSTPLLRLSW 250 (364)
T ss_pred ccCeEEEEEEeeccccceeeEEEecCcceeEEEeccCccceEEEecCCCcEEEEEecccccceEEecCCCCCCcceeecc
Confidence 99999999999974 3566789999999999999654 788999999999999987654311111122 467889999
Q ss_pred CCCC-CEEEEecCC--eEEEEEcCCC-ceEEEEEecccCCCCCceeEEEEEEccCC--EEEEEcCCCcEEEEeCCCCee-
Q psy12614 164 HSSG-DYLVTGCAA--AVRVWDIHKG-HAIHKMSLDKSSKFSKNTAVWCVAFCADF--TIITGDSGGFVRFWDGKTGVQ- 236 (708)
Q Consensus 164 s~d~-~~l~~~~~d--~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~l~~~~~dg~i~~wd~~~~~~- 236 (708)
++.. +++|+-..| .|.+.|++.. ..+.++. +|...|+.++|.|.. .+++++.|.++.+||+.+.-.
T Consensus 251 nkqDpnymATf~~dS~~V~iLDiR~P~tpva~L~-------~H~a~VNgIaWaPhS~~hictaGDD~qaliWDl~q~~~~ 323 (364)
T KOG0290|consen 251 NKQDPNYMATFAMDSNKVVILDIRVPCTPVARLR-------NHQASVNGIAWAPHSSSHICTAGDDCQALIWDLQQMPRE 323 (364)
T ss_pred CcCCchHHhhhhcCCceEEEEEecCCCcceehhh-------cCcccccceEecCCCCceeeecCCcceEEEEeccccccc
Confidence 8754 678887777 8999999864 4455554 459999999999977 499999999999999975322
Q ss_pred -----EEEeeccccCeEEEEEeC-CCCEEEEEecCCeEEE
Q psy12614 237 -----WSDVKTHKKDILALTVSE-DENYLYCAGVDPTVVC 270 (708)
Q Consensus 237 -----~~~~~~~~~~i~~~~~s~-~~~~l~~~~~dg~i~i 270 (708)
+..+. ..+.|..+.|++ ...+++.+. ++.+.+
T Consensus 324 ~~~dPilay~-a~~EVNqi~Ws~~~~Dwiai~~-~kklei 361 (364)
T KOG0290|consen 324 NGEDPILAYT-AGGEVNQIQWSSSQPDWIAICF-GKKLEI 361 (364)
T ss_pred CCCCchhhhh-ccceeeeeeecccCCCEEEEEe-cCeeeE
Confidence 22223 467899999986 446777665 344444
|
|
| >PRK01742 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=3.7e-16 Score=159.51 Aligned_cols=223 Identities=14% Similarity=0.087 Sum_probs=159.1
Q ss_pred ceeeeeeeeccCCCCcEEEEEEcCCCCEEEEEeCC---CcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEE
Q psy12614 13 TYGVHNIKFYAPEPKVINCIACEPKSSRLAVSRAD---QSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSG 87 (708)
Q Consensus 13 ~~~~~~~~~~~~h~~~v~~~~~s~~~~~la~~~~d---g~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~ 87 (708)
++.....+.+..|...+.+.+|||||++||.++.+ ..|.+||+.+++... +.... +....++|+ |+.|+.+
T Consensus 190 d~dg~~~~~lt~~~~~v~~p~wSPDG~~la~~s~~~~~~~i~i~dl~tg~~~~--l~~~~--g~~~~~~wSPDG~~La~~ 265 (429)
T PRK01742 190 DYDGFNQFIVNRSSQPLMSPAWSPDGSKLAYVSFENKKSQLVVHDLRSGARKV--VASFR--GHNGAPAFSPDGSRLAFA 265 (429)
T ss_pred CCCCCCceEeccCCCccccceEcCCCCEEEEEEecCCCcEEEEEeCCCCceEE--EecCC--CccCceeECCCCCEEEEE
Confidence 33344455677888899999999999999987643 369999998876432 22222 334468999 7888776
Q ss_pred c-CCCcEEEE--ECCCCeEeEEEeecCCceEEEEEecCCCEEEEEe-CCCcEEEEEccC--CcEEEEEecccccccEEEE
Q psy12614 88 G-LQGFVNEY--DMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGT-EQGHINLFQISD--EGLLYEKLLDRQQGRILCT 161 (708)
Q Consensus 88 ~-~d~~i~vw--d~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~-~d~~i~iwd~~~--~~~~~~~~~~~~~~~v~~~ 161 (708)
+ .+|.+.|| |+.+++. ..+..+...+.+.+|+|||+.|+.++ .++...||++.. +.. ..+ .+.+ ...
T Consensus 266 ~~~~g~~~Iy~~d~~~~~~-~~lt~~~~~~~~~~wSpDG~~i~f~s~~~g~~~I~~~~~~~~~~---~~l-~~~~--~~~ 338 (429)
T PRK01742 266 SSKDGVLNIYVMGANGGTP-SQLTSGAGNNTEPSWSPDGQSILFTSDRSGSPQVYRMSASGGGA---SLV-GGRG--YSA 338 (429)
T ss_pred EecCCcEEEEEEECCCCCe-EeeccCCCCcCCEEECCCCCEEEEEECCCCCceEEEEECCCCCe---EEe-cCCC--CCc
Confidence 4 67876555 6666554 45566777788999999999887665 467888887653 332 222 2333 457
Q ss_pred EECCCCCEEEEecCCeEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeC--CCCeeEE
Q psy12614 162 AWHSSGDYLVTGCAAAVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDG--KTGVQWS 238 (708)
Q Consensus 162 ~~s~d~~~l~~~~~d~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~--~~~~~~~ 238 (708)
.|+|||++|+..+.+.+.+||+.+++..... .. .....+.|+|||+ ++.++.+|...+|++ .+|+...
T Consensus 339 ~~SpDG~~ia~~~~~~i~~~Dl~~g~~~~lt-~~--------~~~~~~~~sPdG~~i~~~s~~g~~~~l~~~~~~G~~~~ 409 (429)
T PRK01742 339 QISADGKTLVMINGDNVVKQDLTSGSTEVLS-ST--------FLDESPSISPNGIMIIYSSTQGLGKVLQLVSADGRFKA 409 (429)
T ss_pred cCCCCCCEEEEEcCCCEEEEECCCCCeEEec-CC--------CCCCCceECCCCCEEEEEEcCCCceEEEEEECCCCceE
Confidence 8999999999888786677999888754322 11 1234678999996 777778888887765 3578888
Q ss_pred EeeccccCeEEEEEeCC
Q psy12614 239 DVKTHKKDILALTVSED 255 (708)
Q Consensus 239 ~~~~~~~~i~~~~~s~~ 255 (708)
.+..|.+.+...+|+|-
T Consensus 410 ~l~~~~g~~~~p~wsp~ 426 (429)
T PRK01742 410 RLPGSDGQVKFPAWSPY 426 (429)
T ss_pred EccCCCCCCCCcccCCC
Confidence 88888888999999984
|
|
| >KOG1334|consensus | Back alignment and domain information |
|---|
Probab=99.71 E-value=2e-16 Score=147.79 Aligned_cols=301 Identities=14% Similarity=0.132 Sum_probs=220.1
Q ss_pred EEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECCCCeEeEEEe-ecCCceEEEEEec--CCCEEEEEeCCCcEEE
Q psy12614 63 RVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMRRLNIKSSTA-VTSGTCWCLSVHK--KKRLLAAGTEQGHINL 137 (708)
Q Consensus 63 ~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~~~~~~~~-~~~~~v~~~~~s~--~~~~la~~~~d~~i~i 137 (708)
..|.+|. +.|..|.|+ |..|++++.|..|.+||+..++.+..+. +|...|....|-| +.+.+++++.||.+++
T Consensus 136 ~kL~~H~--GcVntV~FN~~Gd~l~SgSDD~~vv~WdW~~~~~~l~f~SGH~~NvfQaKFiP~s~d~ti~~~s~dgqvr~ 213 (559)
T KOG1334|consen 136 KKLNKHK--GCVNTVHFNQRGDVLASGSDDLQVVVWDWVSGSPKLSFESGHCNNVFQAKFIPFSGDRTIVTSSRDGQVRV 213 (559)
T ss_pred hcccCCC--CccceeeecccCceeeccCccceEEeehhhccCcccccccccccchhhhhccCCCCCcCceeccccCceee
Confidence 4788999 999999999 9999999999999999999998776665 8988888888887 3457899999999999
Q ss_pred EEcc-CCcEEEEEecccccccEEEEEECCCC-CEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccC
Q psy12614 138 FQIS-DEGLLYEKLLDRQQGRILCTAWHSSG-DYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCAD 214 (708)
Q Consensus 138 wd~~-~~~~~~~~~~~~~~~~v~~~~~s~d~-~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 214 (708)
=.+. ++.+.-...+..|.++|..++.-|+. ..|.+++.| .+.-+|++.+.....+....... ...-....++..|-
T Consensus 214 s~i~~t~~~e~t~rl~~h~g~vhklav~p~sp~~f~S~geD~~v~~~Dlr~~~pa~~~~cr~~~~-~~~v~L~~Ia~~P~ 292 (559)
T KOG1334|consen 214 SEILETGYVENTKRLAPHEGPVHKLAVEPDSPKPFLSCGEDAVVFHIDLRQDVPAEKFVCREADE-KERVGLYTIAVDPR 292 (559)
T ss_pred eeeccccceecceecccccCccceeeecCCCCCcccccccccceeeeeeccCCccceeeeeccCC-ccceeeeeEecCCC
Confidence 8765 44444356788899999999999987 457888999 99999999887766665432111 11236778888887
Q ss_pred C--EEEEEcCCCcEEEEeCCCCee------EEEe------eccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccc
Q psy12614 215 F--TIITGDSGGFVRFWDGKTGVQ------WSDV------KTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVC 280 (708)
Q Consensus 215 ~--~l~~~~~dg~i~~wd~~~~~~------~~~~------~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~ 280 (708)
. .+++++.|..+++||.+.-.. +..+ ....-.|++++|+.++.-|.++-.|-.|+++.-..+
T Consensus 293 nt~~faVgG~dqf~RvYD~R~~~~e~~n~~~~~f~p~hl~~d~~v~ITgl~Ysh~~sElLaSYnDe~IYLF~~~~~---- 368 (559)
T KOG1334|consen 293 NTNEFAVGGSDQFARVYDQRRIDKEENNGVLDKFCPHHLVEDDPVNITGLVYSHDGSELLASYNDEDIYLFNKSMG---- 368 (559)
T ss_pred CccccccCChhhhhhhhcccchhhccccchhhhcCCccccccCcccceeEEecCCccceeeeecccceEEeccccc----
Confidence 6 499999999999999764321 1221 123457999999988877777788889999955441
Q ss_pred cCCCCCCCCc---ceEEeEEEecccc--ceEEEEEe---CCEEEEEcCCCeEEEEeCCCCceeecCccCCCCceEEEEcC
Q psy12614 281 STSGPEQGSS---VWVRSVNRVIHEG--DVKSLALH---GNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKD 352 (708)
Q Consensus 281 ~~~g~~~~~~---~~~~~~~~~~~~~--~v~~l~~~---~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~ 352 (708)
.|.+.... .......+++|.. .|..+-|- .+++++|+.-|.|.||+-.+..+..+.
T Consensus 369 --~G~~p~~~s~~~~~~k~vYKGHrN~~TVKgVNFfGPrsEyVvSGSDCGhIFiW~K~t~eii~~M-------------- 432 (559)
T KOG1334|consen 369 --DGSEPDPSSPREQYVKRVYKGHRNSRTVKGVNFFGPRSEYVVSGSDCGHIFIWDKKTGEIIRFM-------------- 432 (559)
T ss_pred --cCCCCCCCcchhhccchhhcccccccccceeeeccCccceEEecCccceEEEEecchhHHHHHh--------------
Confidence 11100000 0111223677754 37777777 578888888888888887665422222
Q ss_pred CcEEEEEcCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEEEc-CCceEEEEE
Q psy12614 353 IQHVLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYST-ESCVRLHSL 431 (708)
Q Consensus 353 ~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~-d~~i~i~~~ 431 (708)
.+...-|.|+.-+|.-..||++. |..|+||..
T Consensus 433 -----------------------------------------------egDr~VVNCLEpHP~~PvLAsSGid~DVKIWTP 465 (559)
T KOG1334|consen 433 -----------------------------------------------EGDRHVVNCLEPHPHLPVLASSGIDHDVKIWTP 465 (559)
T ss_pred -----------------------------------------------hcccceEeccCCCCCCchhhccCCccceeeecC
Confidence 23334678888889889999854 999999987
Q ss_pred Ee
Q psy12614 432 DL 433 (708)
Q Consensus 432 ~~ 433 (708)
..
T Consensus 466 ~~ 467 (559)
T KOG1334|consen 466 LT 467 (559)
T ss_pred Cc
Confidence 44
|
|
| >KOG2041|consensus | Back alignment and domain information |
|---|
Probab=99.69 E-value=3.1e-13 Score=132.52 Aligned_cols=471 Identities=12% Similarity=0.132 Sum_probs=305.2
Q ss_pred CcEEEEEEe--CCEEEEEcCCCcEEEEECCCCe---------------EeEEEeecCCceEEEEEecCCCEEEEEeCCCc
Q psy12614 72 NSIECLTWF--NDRLFSGGLQGFVNEYDMRRLN---------------IKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGH 134 (708)
Q Consensus 72 ~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~~---------------~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~ 134 (708)
....+++|+ .++++.|+.||.+++..+.+.. .-+++.+|.+.|.-+.|+.+.+.|-+...+|.
T Consensus 15 vkL~c~~WNke~gyIAcgG~dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtLeGH~~sV~vvTWNe~~QKLTtSDt~Gl 94 (1189)
T KOG2041|consen 15 VKLHCAEWNKESGYIACGGADGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEGHNASVMVVTWNENNQKLTTSDTSGL 94 (1189)
T ss_pred ceEEEEEEcccCCeEEeccccceeEEEEccccCCcccccccccccccchhhhhccCcceEEEEEeccccccccccCCCce
Confidence 578999999 8999999999999999876532 23567899999999999999999999999999
Q ss_pred EEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEcc
Q psy12614 135 INLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCA 213 (708)
Q Consensus 135 i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 213 (708)
|.+|-+-.|.......-......|.+++|..||+.++....| .|.+=.+...+...+-. . ......+.|++
T Consensus 95 IiVWmlykgsW~EEMiNnRnKSvV~SmsWn~dG~kIcIvYeDGavIVGsvdGNRIwgKeL-k-------g~~l~hv~ws~ 166 (1189)
T KOG2041|consen 95 IIVWMLYKGSWCEEMINNRNKSVVVSMSWNLDGTKICIVYEDGAVIVGSVDGNRIWGKEL-K-------GQLLAHVLWSE 166 (1189)
T ss_pred EEEEeeecccHHHHHhhCcCccEEEEEEEcCCCcEEEEEEccCCEEEEeeccceecchhc-c-------hheccceeecc
Confidence 999998887654333344556789999999999999999999 88777765443322211 1 23355789999
Q ss_pred CCE-EEEEcCCCcEEEEeCCCCe-------eEEE----eeccccCeEEEEEe--------CCCCEEEEEecCCeEEEEEc
Q psy12614 214 DFT-IITGDSGGFVRFWDGKTGV-------QWSD----VKTHKKDILALTVS--------EDENYLYCAGVDPTVVCFQR 273 (708)
Q Consensus 214 ~~~-l~~~~~dg~i~~wd~~~~~-------~~~~----~~~~~~~i~~~~~s--------~~~~~l~~~~~dg~i~iw~~ 273 (708)
|.+ ++.+-.+|.+.+||.+..- +... +......|..+.|. ||...|+++-.+|.+.+-.-
T Consensus 167 D~~~~Lf~~ange~hlydnqgnF~~Kl~~~c~Vn~tg~~s~~~~kia~i~w~~g~~~~v~pdrP~lavcy~nGr~QiMR~ 246 (1189)
T KOG2041|consen 167 DLEQALFKKANGETHLYDNQGNFERKLEKDCEVNGTGIFSNFPTKIAEIEWNTGPYQPVPPDRPRLAVCYANGRMQIMRS 246 (1189)
T ss_pred cHHHHHhhhcCCcEEEecccccHHHhhhhceEEeeeeeecCCCccccceeeccCccccCCCCCCEEEEEEcCceehhhhh
Confidence 996 6677788999999975321 1111 11122234555553 57789999999999888765
Q ss_pred cCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEEEcCCC---------eEEEEeCCCCceeecCccCC
Q psy12614 274 TRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSGGLDS---------YLSLSYYPPKTLVKYPCTLA 342 (708)
Q Consensus 274 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~~~d~---------~i~iw~~~~~~~~~~~~~~~ 342 (708)
.+ .+ ...+......+....|+ |..|+.+|.+. .|.+|..-+..+..+..+..
T Consensus 247 eN--------D~---------~Pvv~dtgm~~vgakWnh~G~vLAvcG~~~da~~~~d~n~v~Fysp~G~i~gtlkvpg~ 309 (1189)
T KOG2041|consen 247 EN--------DP---------EPVVVDTGMKIVGAKWNHNGAVLAVCGNDSDADEPTDSNKVHFYSPYGHIVGTLKVPGS 309 (1189)
T ss_pred cC--------CC---------CCeEEecccEeecceecCCCcEEEEccCcccccCccccceEEEeccchhheEEEecCCc
Confidence 55 21 01111223567778888 88888887643 56666665555555554555
Q ss_pred CCceEEEEcCCcEEEEEcCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEEEc
Q psy12614 343 QSTPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYST 422 (708)
Q Consensus 343 ~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~ 422 (708)
...+++|-..|-.++..-++.|.+=++...- .+... ...|. ++....
T Consensus 310 ~It~lsWEg~gLriA~AvdsfiyfanIRP~y---------------------kWgy~---e~TvV---------y~y~~~ 356 (1189)
T KOG2041|consen 310 CITGLSWEGTGLRIAIAVDSFIYFANIRPEY---------------------KWGYI---EETVV---------YVYQKE 356 (1189)
T ss_pred eeeeeEEcCCceEEEEEecceEEEEeecccc---------------------eEEEe---eeEEE---------EEEccC
Confidence 6667777777777888888887776665422 01000 00000 111111
Q ss_pred ---CCceEEEEEEecCCcceeEEeecCCcccccceeEEEEEecCCCeEEEEecCCcEEEe---cCCCeEEEEEecCCCCC
Q psy12614 423 ---ESCVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVLISADSTLLLAVSLNGPLYII---DLSSLEIKYCVDPYKSN 496 (708)
Q Consensus 423 ---d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~~~~~dg~i~~~---~~~~~~~~~~~~~~~~~ 496 (708)
.-.|.+||..+.+. .++. +....+++|+.+.-.|+.-..++.+-.+ ++.+....-.+...-|.
T Consensus 357 e~p~y~i~Fwdtk~nek--~vK~---------V~~~~~~a~~~ehCvL~~~~d~~~i~e~s~le~~~~~~~l~LCNSIGT 425 (1189)
T KOG2041|consen 357 ELPQYGIMFWDTKTNEK--TVKT---------VTHFENMAFYREHCVLINRQDDGVIPEYSTLENRSRVYFLQLCNSIGT 425 (1189)
T ss_pred CCcceEEEEEecccChh--hhhh---------hcceeehheecccEEEEeccccCCCcchhhhhcccceEEEeeecccCC
Confidence 34588999887332 2332 1133338888888888877777763222 22211111111111111
Q ss_pred cc---CcceEEEEECCCCcEEEEEecCCeEEEEECC--ce--------------------------------eeecCCCC
Q psy12614 497 LM---SDVISLVQMSECKQYIVCADRKSHVVIWKNG--QH--------------------------------HASLPRYR 539 (708)
Q Consensus 497 ~~---~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~--~~--------------------------------~~~~~~~~ 539 (708)
.- ...|.-....-++.+++.++.+ .+.+|... +. ..++.+..
T Consensus 426 ~lD~kytdirP~Fv~vn~~~vviAS~e-~~~iWhy~~pK~~s~l~~~k~rkegr~h~Ddtp~ga~d~~l~ys~kt~~G~~ 504 (1189)
T KOG2041|consen 426 SLDYKYTDIRPKFVCVNGICVVIASEE-RYFIWHYVLPKFNSVLAGVKIRKEGRFHGDDTPEGAQDRTLEYSTKTLLGSK 504 (1189)
T ss_pred cCCCCcceeeeeEEEecceEEEEeccc-cEEEEEEeccchhhhhhhhhhcccccccCCCCccchhhceeeccceeeccCC
Confidence 00 1122222233377788888765 67788754 10 11344555
Q ss_pred CCceEEEEcCCCCEEEEEecCCcEEEEEcCCCCCCchhhhhhccCchhhhcCCCCeeEEEeCCCCCceEEEEcCeeEEEE
Q psy12614 540 KPSTAMAIHPTLSTLVTVYSDHRIVEFDLNRKAFTTFSRKLETNHPNEWLSRQLPVLGIEFDPQDSSLIYLMDDSALCVI 619 (708)
Q Consensus 540 ~~v~~l~~s~d~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~~~~l~~~~~d~~i~~w 619 (708)
.+|.+++.+ .++|.++-..|.|.-|.+.+..+. ..+ .-...|.+++.+-+..++++..--|.+.+.
T Consensus 505 DpICAl~~s--dk~l~vareSG~I~rySl~nv~l~-----------n~y-~~n~~~y~~~lNCnstRlAiId~~gv~tf~ 570 (1189)
T KOG2041|consen 505 DPICALCIS--DKFLMVARESGGIYRYSLNNVVLT-----------NSY-PVNPSIYSIKLNCNSTRLAIIDLVGVVTFQ 570 (1189)
T ss_pred Ccceeeeec--ceEEEEEeccCceEEEEecceeee-----------ecc-ccCchheeEeeccCcchhhhhhhhceeeee
Confidence 688888886 678999999999999999988665 222 133468888888888889888888888888
Q ss_pred ecCCCCC
Q psy12614 620 NKNKSLA 626 (708)
Q Consensus 620 d~~~~~~ 626 (708)
|+.-+..
T Consensus 571 dLd~d~~ 577 (1189)
T KOG2041|consen 571 DLDYDFD 577 (1189)
T ss_pred ecccccC
Confidence 8875443
|
|
| >COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown] | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.4e-11 Score=115.40 Aligned_cols=504 Identities=13% Similarity=0.133 Sum_probs=274.9
Q ss_pred eccCCCCcEEEEEEcCCCCEEEEE-------eCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEE-Ee--CCEEEEEcCC
Q psy12614 21 FYAPEPKVINCIACEPKSSRLAVS-------RADQSIEIWDISETPHVDRVFIGDPLSNSIECLT-WF--NDRLFSGGLQ 90 (708)
Q Consensus 21 ~~~~h~~~v~~~~~s~~~~~la~~-------~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~-~~--~~~l~s~~~d 90 (708)
-+..|-+-|+...|+|+|+.+|.. ...+.+.+.+.+.|+..+.++-|.. .+.++ |. |+.+++...-
T Consensus 73 ritS~lGVvnn~kf~pdGrkvaf~rv~~~ss~~taDly~v~~e~Ge~kRiTyfGr~----fT~VaG~~~dg~iiV~TD~~ 148 (668)
T COG4946 73 RITSGLGVVNNPKFSPDGRKVAFSRVMLGSSLQTADLYVVPSEDGEAKRITYFGRR----FTRVAGWIPDGEIIVSTDFH 148 (668)
T ss_pred EEecccceeccccCCCCCcEEEEEEEEecCCCccccEEEEeCCCCcEEEEEEeccc----cceeeccCCCCCEEEEeccC
Confidence 355677889999999999998872 2345688888888887766665533 33332 54 5555555433
Q ss_pred CcEEEEECCCCeEeEEEee--------cCCceEEEEEecCCCEEEEE--------------eCCCcEEEEEccCCcEEEE
Q psy12614 91 GFVNEYDMRRLNIKSSTAV--------TSGTCWCLSVHKKKRLLAAG--------------TEQGHINLFQISDEGLLYE 148 (708)
Q Consensus 91 ~~i~vwd~~~~~~~~~~~~--------~~~~v~~~~~s~~~~~la~~--------------~~d~~i~iwd~~~~~~~~~ 148 (708)
.-..-| .++..+.. .-++.+.+.+- || .++.| +..| ++|--..+...+
T Consensus 149 tPF~q~-----~~lYkv~~dg~~~e~LnlGpathiv~~-dg-~ivigRntydLP~WK~YkGGtrG--klWis~d~g~tF- 218 (668)
T COG4946 149 TPFSQW-----TELYKVNVDGIKTEPLNLGPATHIVIK-DG-IIVIGRNTYDLPHWKGYKGGTRG--KLWISSDGGKTF- 218 (668)
T ss_pred CCcccc-----eeeeEEccCCceeeeccCCceeeEEEe-CC-EEEEccCcccCcccccccCCccc--eEEEEecCCcce-
Confidence 222212 11222211 11333333332 33 22222 1112 334332222111
Q ss_pred EecccccccEEEEEECCCCCEEEEecCC--eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEEEEcCCCcE
Q psy12614 149 KLLDRQQGRILCTAWHSSGDYLVTGCAA--AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFV 226 (708)
Q Consensus 149 ~~~~~~~~~v~~~~~s~d~~~l~~~~~d--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i 226 (708)
..+-...+.|.+-..-.+--++++--.+ .+.--|+ +|+-+++.+.. ..-.+=..+.||+-++-...|.|
T Consensus 219 eK~vdl~~~vS~PmIV~~RvYFlsD~eG~GnlYSvdl-dGkDlrrHTnF--------tdYY~R~~nsDGkrIvFq~~GdI 289 (668)
T COG4946 219 EKFVDLDGNVSSPMIVGERVYFLSDHEGVGNLYSVDL-DGKDLRRHTNF--------TDYYPRNANSDGKRIVFQNAGDI 289 (668)
T ss_pred eeeeecCCCcCCceEEcceEEEEecccCccceEEecc-CCchhhhcCCc--------hhccccccCCCCcEEEEecCCcE
Confidence 1111122233333332222233332222 3443343 24333332211 11222234568876666777899
Q ss_pred EEEeCCCCeeEEEeec---c---c--cCeEEEE----EeC-CCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceE
Q psy12614 227 RFWDGKTGVQWSDVKT---H---K--KDILALT----VSE-DENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWV 293 (708)
Q Consensus 227 ~~wd~~~~~~~~~~~~---~---~--~~i~~~~----~s~-~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~ 293 (708)
.+||..+......--+ . . ..+.-.. |++ +|.+++..+. |...+.+... +
T Consensus 290 ylydP~td~lekldI~lpl~rk~k~~k~~~pskyledfa~~~Gd~ia~VSR-GkaFi~~~~~--------~--------- 351 (668)
T COG4946 290 YLYDPETDSLEKLDIGLPLDRKKKQPKFVNPSKYLEDFAVVNGDYIALVSR-GKAFIMRPWD--------G--------- 351 (668)
T ss_pred EEeCCCcCcceeeecCCccccccccccccCHHHhhhhhccCCCcEEEEEec-CcEEEECCCC--------C---------
Confidence 9999876543221100 0 0 0011111 222 5778877764 6777776655 3
Q ss_pred EeEEEeccccceEEEEEe--CCEEEEEcCCC-eEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEEEcC-CeEEEEEe
Q psy12614 294 RSVNRVIHEGDVKSLALH--GNRLYSGGLDS-YLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYT-SHLELWSL 369 (708)
Q Consensus 294 ~~~~~~~~~~~v~~l~~~--~~~l~s~~~d~-~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~-~~i~i~~~ 369 (708)
.....+|.+.|+-..+. ++.++.|..|| .+-+++..+.....+..+.....++..+++|+.++++.+ ..+.+.|+
T Consensus 352 -~~iqv~~~~~VrY~r~~~~~e~~vigt~dgD~l~iyd~~~~e~kr~e~~lg~I~av~vs~dGK~~vvaNdr~el~vidi 430 (668)
T COG4946 352 -YSIQVGKKGGVRYRRIQVDPEGDVIGTNDGDKLGIYDKDGGEVKRIEKDLGNIEAVKVSPDGKKVVVANDRFELWVIDI 430 (668)
T ss_pred -eeEEcCCCCceEEEEEccCCcceEEeccCCceEEEEecCCceEEEeeCCccceEEEEEcCCCcEEEEEcCceEEEEEEe
Confidence 22334666777777766 77899999999 999999999998888878899999999999998888755 57888899
Q ss_pred cCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEEEc-----CCceEEEEEEecCCcceeEEee
Q psy12614 370 GSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYST-----ESCVRLHSLDLDGDKPQISRIK 444 (708)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~-----d~~i~i~~~~~~~~~~~~~~~~ 444 (708)
.++. ...+.....+-|+.++|+|+++++|.+- ...|+++|+.. ++ .+. +.
T Consensus 431 dngn---------------------v~~idkS~~~lItdf~~~~nsr~iAYafP~gy~tq~Iklydm~~--~K-iy~-vT 485 (668)
T COG4946 431 DNGN---------------------VRLIDKSEYGLITDFDWHPNSRWIAYAFPEGYYTQSIKLYDMDG--GK-IYD-VT 485 (668)
T ss_pred cCCC---------------------eeEecccccceeEEEEEcCCceeEEEecCcceeeeeEEEEecCC--Ce-EEE-ec
Confidence 8866 2223334567799999999999999853 56799999986 22 122 11
Q ss_pred cCCcccccceeEEEEEecCCCeEEEEecCCc-------EEEecCCCe--EEEEEecCCCCCccCcceEEEEECCCCcEEE
Q psy12614 445 NLPAPLFKSIFTHVLISADSTLLLAVSLNGP-------LYIIDLSSL--EIKYCVDPYKSNLMSDVISLVQMSECKQYIV 515 (708)
Q Consensus 445 ~~~~~~~~~~i~~~~~s~d~~~l~~~~~dg~-------i~~~~~~~~--~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~ 515 (708)
.-.++ ..+ -+|.||+++|...+.... ++++..... ..+..+. +|. .||-.+..-
T Consensus 486 T~ta~--Dfs---PaFD~d~ryLYfLs~RsLdPs~Drv~fnf~f~~vskPylv~L~--~g~----------~sP~~q~p~ 548 (668)
T COG4946 486 TPTAY--DFS---PAFDPDGRYLYFLSARSLDPSNDRVIFNFSFQRVSKPYLVVLG--RGY----------YSPFNQPPD 548 (668)
T ss_pred CCccc--ccC---cccCCCCcEEEEEeccccCCCCCeeEEEEEEeeeccceEEEec--CCC----------CChhhcCch
Confidence 11111 223 689999999987764332 444432200 0111111 010 112111111
Q ss_pred -EEecCCeEEEEECCceeeecCCCCCCceEEEEcCCCCEEE--------------EEecCCcEEEEEcCCCCCCchhhhh
Q psy12614 516 -CADRKSHVVIWKNGQHHASLPRYRKPSTAMAIHPTLSTLV--------------TVYSDHRIVEFDLNRKAFTTFSRKL 580 (708)
Q Consensus 516 -~~~~d~~i~iw~~~~~~~~~~~~~~~v~~l~~s~d~~~l~--------------~~~~dg~i~vwd~~~~~~~~~~~~~ 580 (708)
+-++++.+-+=.+......++-..+.-.+++=..+++.|+ .+-.-|.+.+||+++.+..
T Consensus 549 ~~~~ea~e~dle~ie~r~eP~pVee~dY~sI~~lk~~killfs~pi~Gefs~yy~gq~~kG~l~~ydletkk~~------ 622 (668)
T COG4946 549 EANSEAGEVDLEGIEDRVEPFPVEEGDYRSIAGLKNGKILLFSYPIHGEFSQYYWGQPEKGRLEKYDLETKKVE------ 622 (668)
T ss_pred hcCccccceehhhhcccccccccCccceeEeeecCCCeEEEEEeeccchhhhhhcCCCccceEEEEecchhhHH------
Confidence 1122333333222222222222222222222222222211 1234577888999887644
Q ss_pred hccCchhhhcCCCCeeEEEeCCCCCceEEEEcCeeEEEEecCCC
Q psy12614 581 ETNHPNEWLSRQLPVLGIEFDPQDSSLIYLMDDSALCVINKNKS 624 (708)
Q Consensus 581 ~~~~~~~~~~~~~~i~~l~~s~~~~~l~~~~~d~~i~~wd~~~~ 624 (708)
.-...+.++..|+|++.++. -.|+.++++|+++.
T Consensus 623 ---------e~k~nvss~rlS~D~s~ilv-k~d~kl~~f~vekk 656 (668)
T COG4946 623 ---------EYKDNVSSFRLSSDGSKILV-KLDGKLRLFDVEKK 656 (668)
T ss_pred ---------HHhcccceEEEcCCCCEEEE-EeCCeEEEEecccC
Confidence 23456889999999999888 77999999999863
|
|
| >KOG2139|consensus | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.8e-14 Score=129.79 Aligned_cols=237 Identities=13% Similarity=0.155 Sum_probs=164.5
Q ss_pred CCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe---CCEEEEEcCCCcEEEEECCCC
Q psy12614 25 EPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF---NDRLFSGGLQGFVNEYDMRRL 101 (708)
Q Consensus 25 h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~---~~~l~s~~~d~~i~vwd~~~~ 101 (708)
.+-.+..++|++.-..+|++..|-.|+|||-.. +... .++... ...|++++|- +..|+.|+.. -|.+|.....
T Consensus 97 s~~dlr~~aWhqH~~~fava~nddvVriy~kss-t~pt-~Lks~s-QrnvtclawRPlsaselavgCr~-gIciW~~s~t 172 (445)
T KOG2139|consen 97 SEIDLRGVAWHQHIIAFAVATNDDVVRIYDKSS-TCPT-KLKSVS-QRNVTCLAWRPLSASELAVGCRA-GICIWSDSRT 172 (445)
T ss_pred hhcceeeEeechhhhhhhhhccCcEEEEeccCC-CCCc-eecchh-hcceeEEEeccCCcceeeeeecc-eeEEEEcCcc
Confidence 345677899999777788999999999999887 3333 344332 4889999998 6677777765 5899976531
Q ss_pred ----eE----------eEEEeecCCceEEEEEecCCCEEEEEeC-CCcEEEEEccCCcEEEEEecccccccEEEEEECCC
Q psy12614 102 ----NI----------KSSTAVTSGTCWCLSVHKKKRLLAAGTE-QGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSS 166 (708)
Q Consensus 102 ----~~----------~~~~~~~~~~v~~~~~s~~~~~la~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d 166 (708)
+. +....+| ..|++|.|++||..+++++. |..|.|||.+++..+... ....+.+.-+.||||
T Consensus 173 ln~~r~~~~~s~~~~qvl~~pgh-~pVtsmqwn~dgt~l~tAS~gsssi~iWdpdtg~~~pL~--~~glgg~slLkwSPd 249 (445)
T KOG2139|consen 173 LNANRNIRMMSTHHLQVLQDPGH-NPVTSMQWNEDGTILVTASFGSSSIMIWDPDTGQKIPLI--PKGLGGFSLLKWSPD 249 (445)
T ss_pred cccccccccccccchhheeCCCC-ceeeEEEEcCCCCEEeecccCcceEEEEcCCCCCccccc--ccCCCceeeEEEcCC
Confidence 11 1122344 68999999999999998875 678999999999876322 234577899999999
Q ss_pred CCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE--EEEEcCCCcEEEEeCC--CCe------
Q psy12614 167 GDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT--IITGDSGGFVRFWDGK--TGV------ 235 (708)
Q Consensus 167 ~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--l~~~~~dg~i~~wd~~--~~~------ 235 (708)
+.+|..+.-| ..++|+........+.... .+.|...+|+|+|+ |++.+..-.++-.... .+.
T Consensus 250 gd~lfaAt~davfrlw~e~q~wt~erw~lg-------sgrvqtacWspcGsfLLf~~sgsp~lysl~f~~~~~~~~~~~~ 322 (445)
T KOG2139|consen 250 GDVLFAATCDAVFRLWQENQSWTKERWILG-------SGRVQTACWSPCGSFLLFACSGSPRLYSLTFDGEDSVFLRPQS 322 (445)
T ss_pred CCEEEEecccceeeeehhcccceecceecc-------CCceeeeeecCCCCEEEEEEcCCceEEEEeecCCCccccCccc
Confidence 9999999999 9999975544333333333 56899999999996 4444433333322111 110
Q ss_pred --e---EEEe------e---ccccCeEEEEEeCCCCEEEEEecCC--------eEEEEEccC
Q psy12614 236 --Q---WSDV------K---THKKDILALTVSEDENYLYCAGVDP--------TVVCFQRTR 275 (708)
Q Consensus 236 --~---~~~~------~---~~~~~i~~~~~s~~~~~l~~~~~dg--------~i~iw~~~~ 275 (708)
. +..+ . -..+++.+++|.|.|.+|++.-..+ .|.+||...
T Consensus 323 ~k~~lliaDL~e~ti~ag~~l~cgeaq~lawDpsGeyLav~fKg~~~v~~~k~~i~~fdtr~ 384 (445)
T KOG2139|consen 323 IKRVLLIADLQEVTICAGQRLCCGEAQCLAWDPSGEYLAVIFKGQSFVLLCKLHISRFDTRK 384 (445)
T ss_pred ceeeeeeccchhhhhhcCcccccCccceeeECCCCCEEEEEEcCCchhhhhhhhhhhhcccc
Confidence 0 1111 0 1246788999999999999875543 366777665
|
|
| >KOG0974|consensus | Back alignment and domain information |
|---|
Probab=99.68 E-value=8.4e-13 Score=135.72 Aligned_cols=200 Identities=14% Similarity=0.207 Sum_probs=157.5
Q ss_pred ccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe-----CCEEEEEcCCCcEEEE
Q psy12614 22 YAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF-----NDRLFSGGLQGFVNEY 96 (708)
Q Consensus 22 ~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~-----~~~l~s~~~d~~i~vw 96 (708)
+..-+++|....+.-+.+.++.+..+..+.|||...+..+.....+.. ....++..- .-++++|+.-+.|.+|
T Consensus 83 ~~~~s~wi~g~~l~~e~k~i~l~~~~ns~~i~d~~~~~~~~~i~~~er--~~l~~~~~~g~s~~~~~i~~gsv~~~iivW 160 (967)
T KOG0974|consen 83 IERFSDWIFGAKLFEENKKIALVTSRNSLLIRDSKNSSVLSKIQSDER--CTLYSSLIIGDSAEELYIASGSVFGEIIVW 160 (967)
T ss_pred hhhccccccccchhhhcceEEEEEcCceEEEEecccCceehhcCCCce--EEEEeEEEEeccCcEEEEEeccccccEEEE
Confidence 333456666677777888899999899999999998876652222221 111222111 3478899999999999
Q ss_pred ECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC
Q psy12614 97 DMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA 176 (708)
Q Consensus 97 d~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d 176 (708)
+...-+.-..+.+|.+.|.++.++.||.++++.++|.++++|++++.+... ....+|..+|..++|.|+ ++++++.|
T Consensus 161 ~~~~dn~p~~l~GHeG~iF~i~~s~dg~~i~s~SdDRsiRlW~i~s~~~~~-~~~fgHsaRvw~~~~~~n--~i~t~ged 237 (967)
T KOG0974|consen 161 KPHEDNKPIRLKGHEGSIFSIVTSLDGRYIASVSDDRSIRLWPIDSREVLG-CTGFGHSARVWACCFLPN--RIITVGED 237 (967)
T ss_pred eccccCCcceecccCCceEEEEEccCCcEEEEEecCcceeeeecccccccC-cccccccceeEEEEeccc--eeEEeccc
Confidence 988544444688999999999999999999999999999999999988763 466789999999999998 89999999
Q ss_pred -eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCC
Q psy12614 177 -AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKT 233 (708)
Q Consensus 177 -~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~ 233 (708)
+.++|+. +++.+..+..+. ...++.++..++.. .++++.||.+++|++..
T Consensus 238 ctcrvW~~-~~~~l~~y~~h~------g~~iw~~~~~~~~~~~vT~g~Ds~lk~~~l~~ 289 (967)
T KOG0974|consen 238 CTCRVWGV-NGTQLEVYDEHS------GKGIWKIAVPIGVIIKVTGGNDSTLKLWDLNG 289 (967)
T ss_pred eEEEEEec-ccceehhhhhhh------hcceeEEEEcCCceEEEeeccCcchhhhhhhc
Confidence 9999975 466666665543 56699999988874 88999999999999754
|
|
| >KOG2139|consensus | Back alignment and domain information |
|---|
Probab=99.68 E-value=4.6e-14 Score=127.23 Aligned_cols=192 Identities=15% Similarity=0.185 Sum_probs=141.4
Q ss_pred CcEEEEEEe--CCEEEEEcCCCcEEEEECCCCeEeEEEe-ecCCceEEEEEecCC-CEEEEEeCCCcEEEEEccCCcEE-
Q psy12614 72 NSIECLTWF--NDRLFSGGLQGFVNEYDMRRLNIKSSTA-VTSGTCWCLSVHKKK-RLLAAGTEQGHINLFQISDEGLL- 146 (708)
Q Consensus 72 ~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~~~~~~~~-~~~~~v~~~~~s~~~-~~la~~~~d~~i~iwd~~~~~~~- 146 (708)
..+..++|+ -..++++..|-.|++||-.. ++...++ .....|+|++|-|.+ +-|++|+..| |.+|........
T Consensus 99 ~dlr~~aWhqH~~~fava~nddvVriy~kss-t~pt~Lks~sQrnvtclawRPlsaselavgCr~g-IciW~~s~tln~~ 176 (445)
T KOG2139|consen 99 IDLRGVAWHQHIIAFAVATNDDVVRIYDKSS-TCPTKLKSVSQRNVTCLAWRPLSASELAVGCRAG-ICIWSDSRTLNAN 176 (445)
T ss_pred cceeeEeechhhhhhhhhccCcEEEEeccCC-CCCceecchhhcceeEEEeccCCcceeeeeecce-eEEEEcCcccccc
Confidence 457888888 55678899999999999877 4444444 345689999999964 5678888765 899987632110
Q ss_pred ---------E--EEecccccccEEEEEECCCCCEEEEecCC--eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEcc
Q psy12614 147 ---------Y--EKLLDRQQGRILCTAWHSSGDYLVTGCAA--AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCA 213 (708)
Q Consensus 147 ---------~--~~~~~~~~~~v~~~~~s~d~~~l~~~~~d--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 213 (708)
. ...-.+| ..|+++.|.+||..+++++.+ .|.|||+.++..+.-...+ .+.+.-+.|+|
T Consensus 177 r~~~~~s~~~~qvl~~pgh-~pVtsmqwn~dgt~l~tAS~gsssi~iWdpdtg~~~pL~~~g-------lgg~slLkwSP 248 (445)
T KOG2139|consen 177 RNIRMMSTHHLQVLQDPGH-NPVTSMQWNEDGTILVTASFGSSSIMIWDPDTGQKIPLIPKG-------LGGFSLLKWSP 248 (445)
T ss_pred cccccccccchhheeCCCC-ceeeEEEEcCCCCEEeecccCcceEEEEcCCCCCcccccccC-------CCceeeEEEcC
Confidence 0 0112233 689999999999999999987 9999999999887666443 67788999999
Q ss_pred CCE-EEEEcCCCcEEEEeCCC-CeeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccC
Q psy12614 214 DFT-IITGDSGGFVRFWDGKT-GVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTR 275 (708)
Q Consensus 214 ~~~-l~~~~~dg~i~~wd~~~-~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~ 275 (708)
||. ++++.-|+..++|+... ....+-. ...+.|...+|+|+|++|+.+.. |.-++|.+.-
T Consensus 249 dgd~lfaAt~davfrlw~e~q~wt~erw~-lgsgrvqtacWspcGsfLLf~~s-gsp~lysl~f 310 (445)
T KOG2139|consen 249 DGDVLFAATCDAVFRLWQENQSWTKERWI-LGSGRVQTACWSPCGSFLLFACS-GSPRLYSLTF 310 (445)
T ss_pred CCCEEEEecccceeeeehhcccceeccee-ccCCceeeeeecCCCCEEEEEEc-CCceEEEEee
Confidence 995 88999999999996443 3332222 34559999999999988776553 4455565543
|
|
| >PRK01742 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=4.5e-15 Score=151.55 Aligned_cols=230 Identities=13% Similarity=0.091 Sum_probs=157.4
Q ss_pred CCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCC---CcEEEEECCCCeEeEEEeecCCceEEEEEec
Q psy12614 47 DQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQ---GFVNEYDMRRLNIKSSTAVTSGTCWCLSVHK 121 (708)
Q Consensus 47 dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d---~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~ 121 (708)
+..|.+||...... . .+..|. ..+.+.+|+ |++|+.++.+ ..|.+||+.+++.... ....+...+++|+|
T Consensus 183 ~~~i~i~d~dg~~~-~-~lt~~~--~~v~~p~wSPDG~~la~~s~~~~~~~i~i~dl~tg~~~~l-~~~~g~~~~~~wSP 257 (429)
T PRK01742 183 PYEVRVADYDGFNQ-F-IVNRSS--QPLMSPAWSPDGSKLAYVSFENKKSQLVVHDLRSGARKVV-ASFRGHNGAPAFSP 257 (429)
T ss_pred eEEEEEECCCCCCc-e-EeccCC--CccccceEcCCCCEEEEEEecCCCcEEEEEeCCCCceEEE-ecCCCccCceeECC
Confidence 46899999876553 3 677777 889999999 8888877643 4799999998764322 22223344789999
Q ss_pred CCCEEEEEe-CCCcEEEE--EccCCcEEEEEecccccccEEEEEECCCCCEEEEec-CC-eEEEEEcCCC-ceEEEEEec
Q psy12614 122 KKRLLAAGT-EQGHINLF--QISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGC-AA-AVRVWDIHKG-HAIHKMSLD 195 (708)
Q Consensus 122 ~~~~la~~~-~d~~i~iw--d~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~-~d-~i~iwd~~~~-~~~~~~~~~ 195 (708)
||+.|++++ .+|.+.|| |+.+++. ..+..+...+....|+|||+.|+.++ .+ ...+|++... .....+ ..
T Consensus 258 DG~~La~~~~~~g~~~Iy~~d~~~~~~---~~lt~~~~~~~~~~wSpDG~~i~f~s~~~g~~~I~~~~~~~~~~~~l-~~ 333 (429)
T PRK01742 258 DGSRLAFASSKDGVLNIYVMGANGGTP---SQLTSGAGNNTEPSWSPDGQSILFTSDRSGSPQVYRMSASGGGASLV-GG 333 (429)
T ss_pred CCCEEEEEEecCCcEEEEEEECCCCCe---EeeccCCCCcCCEEECCCCCEEEEEECCCCCceEEEEECCCCCeEEe-cC
Confidence 999988865 57765555 6666665 34556677788999999999887665 34 6777765432 222222 11
Q ss_pred ccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEcc
Q psy12614 196 KSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRT 274 (708)
Q Consensus 196 ~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~ 274 (708)
.. ....|+|||+ ++..+.+ .+.+||+.+++........ ....+.|+|||++|+.++.++...+|.+.
T Consensus 334 -------~~--~~~~~SpDG~~ia~~~~~-~i~~~Dl~~g~~~~lt~~~--~~~~~~~sPdG~~i~~~s~~g~~~~l~~~ 401 (429)
T PRK01742 334 -------RG--YSAQISADGKTLVMINGD-NVVKQDLTSGSTEVLSSTF--LDESPSISPNGIMIIYSSTQGLGKVLQLV 401 (429)
T ss_pred -------CC--CCccCCCCCCEEEEEcCC-CEEEEECCCCCeEEecCCC--CCCCceECCCCCEEEEEEcCCCceEEEEE
Confidence 22 4578999996 6565554 5677999888654332222 33568899999999999999988887763
Q ss_pred CCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe
Q psy12614 275 RKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH 311 (708)
Q Consensus 275 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~ 311 (708)
. . .|. ....+..|.+.+...+|+
T Consensus 402 ~-----~-~G~--------~~~~l~~~~g~~~~p~ws 424 (429)
T PRK01742 402 S-----A-DGR--------FKARLPGSDGQVKFPAWS 424 (429)
T ss_pred E-----C-CCC--------ceEEccCCCCCCCCcccC
Confidence 2 0 033 355566777777777775
|
|
| >PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.5e-13 Score=135.04 Aligned_cols=312 Identities=11% Similarity=0.049 Sum_probs=191.7
Q ss_pred CEE-EEEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEE
Q psy12614 82 DRL-FSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILC 160 (708)
Q Consensus 82 ~~l-~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~ 160 (708)
+++ ++-..++.|.+.|..+.+.+..+......-..+.|+|||+++++++.||.|.++|+.+++.+ ..+.. ......
T Consensus 6 ~l~~V~~~~~~~v~viD~~t~~~~~~i~~~~~~h~~~~~s~Dgr~~yv~~rdg~vsviD~~~~~~v--~~i~~-G~~~~~ 82 (369)
T PF02239_consen 6 NLFYVVERGSGSVAVIDGATNKVVARIPTGGAPHAGLKFSPDGRYLYVANRDGTVSVIDLATGKVV--ATIKV-GGNPRG 82 (369)
T ss_dssp GEEEEEEGGGTEEEEEETTT-SEEEEEE-STTEEEEEE-TT-SSEEEEEETTSEEEEEETTSSSEE--EEEE--SSEEEE
T ss_pred cEEEEEecCCCEEEEEECCCCeEEEEEcCCCCceeEEEecCCCCEEEEEcCCCeEEEEECCcccEE--EEEec-CCCcce
Confidence 344 45567899999999999999999876555455789999999999999999999999999987 44443 344688
Q ss_pred EEECCCCCEEEEecCC--eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEE-EcCCCcEEEEeCCCCee
Q psy12614 161 TAWHSSGDYLVTGCAA--AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IIT-GDSGGFVRFWDGKTGVQ 236 (708)
Q Consensus 161 ~~~s~d~~~l~~~~~d--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~-~~~dg~i~~wd~~~~~~ 236 (708)
+++|+||+++++++.. .+.++|.++.+.++.+.......-.....+.++..+|... ++. .-..+.|.+.|....+.
T Consensus 83 i~~s~DG~~~~v~n~~~~~v~v~D~~tle~v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~lkd~~~I~vVdy~d~~~ 162 (369)
T PF02239_consen 83 IAVSPDGKYVYVANYEPGTVSVIDAETLEPVKTIPTGGMPVDGPESRVAAIVASPGRPEFVVNLKDTGEIWVVDYSDPKN 162 (369)
T ss_dssp EEE--TTTEEEEEEEETTEEEEEETTT--EEEEEE--EE-TTTS---EEEEEE-SSSSEEEEEETTTTEEEEEETTTSSC
T ss_pred EEEcCCCCEEEEEecCCCceeEeccccccceeecccccccccccCCCceeEEecCCCCEEEEEEccCCeEEEEEeccccc
Confidence 9999999999988754 9999999999999988765211001245677888888774 554 45568999999877643
Q ss_pred EE-EeeccccCeEEEEEeCCCCEEEEE-ecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEE----eccccceEEEE-
Q psy12614 237 WS-DVKTHKKDILALTVSEDENYLYCA-GVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNR----VIHEGDVKSLA- 309 (708)
Q Consensus 237 ~~-~~~~~~~~i~~~~~s~~~~~l~~~-~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~----~~~~~~v~~l~- 309 (708)
+. .............|+|++++++.+ ..++.|-++|..+ ++ ....+ ..|..++..+-
T Consensus 163 ~~~~~i~~g~~~~D~~~dpdgry~~va~~~sn~i~viD~~~--------~k--------~v~~i~~g~~p~~~~~~~~ph 226 (369)
T PF02239_consen 163 LKVTTIKVGRFPHDGGFDPDGRYFLVAANGSNKIAVIDTKT--------GK--------LVALIDTGKKPHPGPGANFPH 226 (369)
T ss_dssp EEEEEEE--TTEEEEEE-TTSSEEEEEEGGGTEEEEEETTT--------TE--------EEEEEE-SSSBEETTEEEEEE
T ss_pred cceeeecccccccccccCcccceeeecccccceeEEEeecc--------ce--------EEEEeeccccccccccccccC
Confidence 32 222244566789999999988765 4567899999887 42 11111 12333333221
Q ss_pred ------Ee----CCEEEEEcCCCeEEEEeCCCCc-eeecCccCCCCceEEEEcCCcEEEEE-----cCCeEEEEEecCCC
Q psy12614 310 ------LH----GNRLYSGGLDSYLSLSYYPPKT-LVKYPCTLAQSTPVSLAKDIQHVLLQ-----YTSHLELWSLGSAQ 373 (708)
Q Consensus 310 ------~~----~~~l~s~~~d~~i~iw~~~~~~-~~~~~~~~~~~~~~~~s~~~~~l~~~-----~~~~i~i~~~~~~~ 373 (708)
|. +...++.-....+.+|+....+ ++++. .....-.+..+|+++++.+. ..+.|.++|..+.+
T Consensus 227 p~~g~vw~~~~~~~~~~~~ig~~~v~v~d~~~wkvv~~I~-~~G~glFi~thP~s~~vwvd~~~~~~~~~v~viD~~tl~ 305 (369)
T PF02239_consen 227 PGFGPVWATSGLGYFAIPLIGTDPVSVHDDYAWKVVKTIP-TQGGGLFIKTHPDSRYVWVDTFLNPDADTVQVIDKKTLK 305 (369)
T ss_dssp TTTEEEEEEEBSSSSEEEEEE--TTT-STTTBTSEEEEEE--SSSS--EE--TT-SEEEEE-TT-SSHT-EEEEECCGTE
T ss_pred CCcceEEeeccccceecccccCCccccchhhcCeEEEEEE-CCCCcceeecCCCCccEEeeccCCCCCceEEEEECcCcc
Confidence 11 2222222222344456665554 44454 33344667889999999886 23679999998744
Q ss_pred CCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEEEc---CCceEEEEEEe
Q psy12614 374 STDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYST---ESCVRLHSLDL 433 (708)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~---d~~i~i~~~~~ 433 (708)
....+.......+..+.|++||+.+.++. ++.|.+||..+
T Consensus 306 --------------------~~~~i~~~~~~~~~h~ef~~dG~~v~vS~~~~~~~i~v~D~~T 348 (369)
T PF02239_consen 306 --------------------VVKTITPGPGKRVVHMEFNPDGKEVWVSVWDGNGAIVVYDAKT 348 (369)
T ss_dssp --------------------EEE-HHHHHT--EEEEEE-TTSSEEEEEEE--TTEEEEEETTT
T ss_pred --------------------eeEEEeccCCCcEeccEECCCCCEEEEEEecCCCEEEEEECCC
Confidence 33333333334588999999999888743 44899999875
|
... |
| >KOG1240|consensus | Back alignment and domain information |
|---|
Probab=99.67 E-value=2.6e-14 Score=148.54 Aligned_cols=272 Identities=15% Similarity=0.176 Sum_probs=180.4
Q ss_pred EeCCCCCeEEEEEecCCCCCcEEEEEEe---CCEEEEEcCCCcEEEEECCCC-------eEeEEEeecCCceEEEEEecC
Q psy12614 53 WDISETPHVDRVFIGDPLSNSIECLTWF---NDRLFSGGLQGFVNEYDMRRL-------NIKSSTAVTSGTCWCLSVHKK 122 (708)
Q Consensus 53 wd~~~~~~~~~~~~~h~~~~~v~~l~~~---~~~l~s~~~d~~i~vwd~~~~-------~~~~~~~~~~~~v~~~~~s~~ 122 (708)
|+.. |..+. .+..|. ..|..++.+ +.++++|+.||+|++||.... +...++...++.+.++.+.+.
T Consensus 1034 W~p~-G~lVA-hL~Ehs--~~v~k~a~s~~~~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~~~ 1109 (1431)
T KOG1240|consen 1034 WNPR-GILVA-HLHEHS--SAVIKLAVSSEHTSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMCGN 1109 (1431)
T ss_pred CCcc-ceEee-hhhhcc--ccccceeecCCCCceEEEecCCceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEeccC
Confidence 5543 45554 777888 888899888 589999999999999997652 234445556789999999999
Q ss_pred CCEEEEEeCCCcEEEEEccCCcEE-----EEEecccc-cccEE-EEEECCC-CC-EEEEecCC-eEEEEEcCCCceEEEE
Q psy12614 123 KRLLAAGTEQGHINLFQISDEGLL-----YEKLLDRQ-QGRIL-CTAWHSS-GD-YLVTGCAA-AVRVWDIHKGHAIHKM 192 (708)
Q Consensus 123 ~~~la~~~~d~~i~iwd~~~~~~~-----~~~~~~~~-~~~v~-~~~~s~d-~~-~l~~~~~d-~i~iwd~~~~~~~~~~ 192 (708)
+..+|+++.||.|.+.+++..+.. ..+....+ .+.+. .-+|... +. .|+.+... .|..||........++
T Consensus 1110 ~~~~Av~t~DG~v~~~~id~~~~~~~~~~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D~r~~~~~w~l 1189 (1431)
T KOG1240|consen 1110 GDQFAVSTKDGSVRVLRIDHYNVSKRVATQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWDTRMRHDAWRL 1189 (1431)
T ss_pred CCeEEEEcCCCeEEEEEccccccccceeeeeecccccCCCceEEeecccccccceeEEEEEeccceEEecchhhhhHHhh
Confidence 999999999999999998762211 11111212 23333 3344332 23 56667666 9999999887777666
Q ss_pred EecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCeeEEEee-ccccCeEEEEEeCC---CCEEEEEec--C
Q psy12614 193 SLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDVK-THKKDILALTVSED---ENYLYCAGV--D 265 (708)
Q Consensus 193 ~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~~-~~~~~i~~~~~s~~---~~~l~~~~~--d 265 (708)
+.. ...+.|++++.+|.+. ++.|+..|.+.+||++=+.++.... .+..+|..+..+|- ....++++. .
T Consensus 1190 k~~-----~~hG~vTSi~idp~~~WlviGts~G~l~lWDLRF~~~i~sw~~P~~~~i~~v~~~~~~~~~S~~vs~~~~~~ 1264 (1431)
T KOG1240|consen 1190 KNQ-----LRHGLVTSIVIDPWCNWLVIGTSRGQLVLWDLRFRVPILSWEHPARAPIRHVWLCPTYPQESVSVSAGSSSN 1264 (1431)
T ss_pred hcC-----ccccceeEEEecCCceEEEEecCCceEEEEEeecCceeecccCcccCCcceEEeeccCCCCceEEEecccCC
Confidence 654 3378899999999997 8999999999999999888777654 24467777776653 345555544 6
Q ss_pred CeEEEEEccCCccc--ccCC-CCCCCCcceEEeEE--EeccccceEEEEEe--CCEEEEEcCCCeEEEEeCCCCcee
Q psy12614 266 PTVVCFQRTRKPQV--CSTS-GPEQGSSVWVRSVN--RVIHEGDVKSLALH--GNRLYSGGLDSYLSLSYYPPKTLV 335 (708)
Q Consensus 266 g~i~iw~~~~~~~~--~~~~-g~~~~~~~~~~~~~--~~~~~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~~~~~ 335 (708)
+.+.+|++.++.+. .-.+ +. ....+..-.. ...+.-.....++. +..+.+|+.|..|+.||.......
T Consensus 1265 nevs~wn~~~g~~~~vl~~s~~~--p~ls~~~Ps~~~~kp~~~~~~~~~~~~~~~~~ltggsd~kIR~wD~~~p~~s 1339 (1431)
T KOG1240|consen 1265 NEVSTWNMETGLRQTVLWASDGA--PILSYALPSNDARKPDSLAGISCGVCEKNGFLLTGGSDMKIRKWDPTRPEIS 1339 (1431)
T ss_pred CceeeeecccCcceEEEEcCCCC--cchhhhcccccCCCCCcccceeeecccCCceeeecCCccceeeccCCCcccc
Confidence 78999999982110 0000 00 0000000000 00111111122222 788999999999999999776544
|
|
| >KOG1587|consensus | Back alignment and domain information |
|---|
Probab=99.66 E-value=2.6e-14 Score=144.00 Aligned_cols=266 Identities=14% Similarity=0.065 Sum_probs=190.9
Q ss_pred CcEEEEECCCC-eEeEEEeecCCceEEEEEecC-CCEEEEEeCCCcEEEEEccCCcEEE----EEecccccccEEEEEEC
Q psy12614 91 GFVNEYDMRRL-NIKSSTAVTSGTCWCLSVHKK-KRLLAAGTEQGHINLFQISDEGLLY----EKLLDRQQGRILCTAWH 164 (708)
Q Consensus 91 ~~i~vwd~~~~-~~~~~~~~~~~~v~~~~~s~~-~~~la~~~~d~~i~iwd~~~~~~~~----~~~~~~~~~~v~~~~~s 164 (708)
+.+.+|++... .+...+. -...|.++.|+|. ..++|.|+.+|+|.+||+..+.... ......|..++..+.|.
T Consensus 222 ~~~~vW~~~~p~~Pe~~~~-~~s~v~~~~f~p~~p~ll~gG~y~GqV~lWD~~~~~~~~~s~ls~~~~sh~~~v~~vvW~ 300 (555)
T KOG1587|consen 222 GVLLVWSLKNPNTPELVLE-SPSEVTCLKFCPFDPNLLAGGCYNGQVVLWDLRKGSDTPPSGLSALEVSHSEPVTAVVWL 300 (555)
T ss_pred ceEEEEecCCCCCceEEEe-cCCceeEEEeccCCcceEEeeccCceEEEEEccCCCCCCCcccccccccCCcCeEEEEEe
Confidence 47999999886 3444443 4578999999994 5677888899999999999776521 12334678899999996
Q ss_pred CCC--CEEEEecCC-eEEEEEcCCCceEEEEEe-ccc----CCCCCceeEEEEEEccCC--EEEEEcCCCcEEEEeCCCC
Q psy12614 165 SSG--DYLVTGCAA-AVRVWDIHKGHAIHKMSL-DKS----SKFSKNTAVWCVAFCADF--TIITGDSGGFVRFWDGKTG 234 (708)
Q Consensus 165 ~d~--~~l~~~~~d-~i~iwd~~~~~~~~~~~~-~~~----~~~~~~~~v~~~~~~~~~--~l~~~~~dg~i~~wd~~~~ 234 (708)
.+. .-+++++.| .|..|+++.-........ ... ..+.....++++.|.+.. ++++|+.+|.|..-+-...
T Consensus 301 ~~~~~~~f~s~ssDG~i~~W~~~~l~~P~e~~~~~~~~~~~~~~~~~~~~t~~~F~~~~p~~FiVGTe~G~v~~~~r~g~ 380 (555)
T KOG1587|consen 301 QNEHNTEFFSLSSDGSICSWDTDMLSLPVEGLLLESKKHKGQQSSKAVGATSLKFEPTDPNHFIVGTEEGKVYKGCRKGY 380 (555)
T ss_pred ccCCCCceEEEecCCcEeeeeccccccchhhcccccccccccccccccceeeEeeccCCCceEEEEcCCcEEEEEeccCC
Confidence 554 448999999 999998865433111111 000 001235678899998865 5999999999987433222
Q ss_pred ---e-----eEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceE
Q psy12614 235 ---V-----QWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVK 306 (708)
Q Consensus 235 ---~-----~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~ 306 (708)
. ....+..|.+.|.++.++|=+..++..+.|-+++||.... . .. ++..+..+...++
T Consensus 381 ~~~~~~~~~~~~~~~~h~g~v~~v~~nPF~~k~fls~gDW~vriWs~~~-----~--~~--------Pl~~~~~~~~~v~ 445 (555)
T KOG1587|consen 381 TPAPEVSYKGHSTFITHIGPVYAVSRNPFYPKNFLSVGDWTVRIWSEDV-----I--AS--------PLLSLDSSPDYVT 445 (555)
T ss_pred cccccccccccccccccCcceEeeecCCCccceeeeeccceeEeccccC-----C--CC--------cchhhhhccceee
Confidence 1 1234566899999999999887777666699999998873 0 11 4555666777799
Q ss_pred EEEEe---CCEEEEEcCCCeEEEEeCCCCceee---cCccCCCCceEEEEcCCcEEEEE-cCCeEEEEEecCC
Q psy12614 307 SLALH---GNRLYSGGLDSYLSLSYYPPKTLVK---YPCTLAQSTPVSLAKDIQHVLLQ-YTSHLELWSLGSA 372 (708)
Q Consensus 307 ~l~~~---~~~l~s~~~d~~i~iw~~~~~~~~~---~~~~~~~~~~~~~s~~~~~l~~~-~~~~i~i~~~~~~ 372 (708)
+++|+ ...++++..||.+.+||+....... ..-.......+.++++|++++++ ..|.+.+|++...
T Consensus 446 ~vaWSptrpavF~~~d~~G~l~iWDLl~~~~~Pv~s~~~~~~~l~~~~~s~~g~~lavGd~~G~~~~~~l~~~ 518 (555)
T KOG1587|consen 446 DVAWSPTRPAVFATVDGDGNLDIWDLLQDDEEPVLSQKVCSPALTRVRWSPNGKLLAVGDANGTTHILKLSES 518 (555)
T ss_pred eeEEcCcCceEEEEEcCCCceehhhhhccccCCcccccccccccceeecCCCCcEEEEecCCCcEEEEEcCch
Confidence 99999 6789999999999999997765222 21112344567888899999997 7789999999753
|
|
| >KOG0771|consensus | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.7e-15 Score=139.55 Aligned_cols=193 Identities=15% Similarity=0.128 Sum_probs=149.3
Q ss_pred EEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECCCCeEeEEE
Q psy12614 30 NCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMRRLNIKSST 107 (708)
Q Consensus 30 ~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~~~~~~~ 107 (708)
.+++|+++|..||+|+.||.++||++.+...+. ....|. +.|.+|.|+ |+.|++.+.| ..+||+.++|.++...
T Consensus 148 k~vaf~~~gs~latgg~dg~lRv~~~Ps~~t~l-~e~~~~--~eV~DL~FS~dgk~lasig~d-~~~VW~~~~g~~~a~~ 223 (398)
T KOG0771|consen 148 KVVAFNGDGSKLATGGTDGTLRVWEWPSMLTIL-EEIAHH--AEVKDLDFSPDGKFLASIGAD-SARVWSVNTGAALARK 223 (398)
T ss_pred eEEEEcCCCCEeeeccccceEEEEecCcchhhh-hhHhhc--CccccceeCCCCcEEEEecCC-ceEEEEeccCchhhhc
Confidence 689999999999999999999999977765554 677788 999999999 8899999999 9999999999766655
Q ss_pred e--ecCCceEEEEEecCC---CE--EEEEeCCCcEEEEEccCCc---EEEEEecccccccEEEEEECCCCCEEEEecCC-
Q psy12614 108 A--VTSGTCWCLSVHKKK---RL--LAAGTEQGHINLFQISDEG---LLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA- 176 (708)
Q Consensus 108 ~--~~~~~v~~~~~s~~~---~~--la~~~~d~~i~iwd~~~~~---~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d- 176 (708)
. .-......+.|+.|+ .+ .+....-+.|+.|++.... ....+........|.+++.++||++++.|+.+
T Consensus 224 t~~~k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l~~~~~~~~~~siSsl~VS~dGkf~AlGT~dG 303 (398)
T KOG0771|consen 224 TPFSKDEMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSGSNFLRLRKKIKRFKSISSLAVSDDGKFLALGTMDG 303 (398)
T ss_pred CCcccchhhhhceecccCCCceEEEEEecCCCCceeEEEeeeeccccccchhhhhhccCcceeEEEcCCCcEEEEeccCC
Confidence 4 233456778898887 32 3333445667777654322 11112222234569999999999999999999
Q ss_pred eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCC
Q psy12614 177 AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGK 232 (708)
Q Consensus 177 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~ 232 (708)
.|.+++..+.+.++-.+.. |...|+.+.|+||.+ +++.+.+....+..+.
T Consensus 304 sVai~~~~~lq~~~~vk~a------H~~~VT~ltF~Pdsr~~~svSs~~~~~v~~l~ 354 (398)
T KOG0771|consen 304 SVAIYDAKSLQRLQYVKEA------HLGFVTGLTFSPDSRYLASVSSDNEAAVTKLA 354 (398)
T ss_pred cEEEEEeceeeeeEeehhh------heeeeeeEEEcCCcCcccccccCCceeEEEEe
Confidence 9999999888877777654 388999999999986 7777777777776654
|
|
| >KOG2111|consensus | Back alignment and domain information |
|---|
Probab=99.66 E-value=9.7e-13 Score=116.98 Aligned_cols=234 Identities=14% Similarity=0.145 Sum_probs=167.5
Q ss_pred EEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEeCCEEE-EEcCC------CcEEEEECCCC
Q psy12614 29 INCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWFNDRLF-SGGLQ------GFVNEYDMRRL 101 (708)
Q Consensus 29 v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~~~~l~-s~~~d------~~i~vwd~~~~ 101 (708)
...++|+.|...+++|.++| .+||+.+.-+... ...-+..+-.+..|-|-.++|+ +||.+ +.+.|||=...
T Consensus 8 ~lsvs~NQD~ScFava~~~G-friyn~~P~ke~~-~r~~~~~G~~~veMLfR~N~laLVGGg~~pky~pNkviIWDD~k~ 85 (346)
T KOG2111|consen 8 TLSVSFNQDHSCFAVATDTG-FRIYNCDPFKESA-SRQFIDGGFKIVEMLFRSNYLALVGGGSRPKYPPNKVIIWDDLKE 85 (346)
T ss_pred eeEEEEccCCceEEEEecCc-eEEEecCchhhhh-hhccccCchhhhhHhhhhceEEEecCCCCCCCCCceEEEEecccC
Confidence 44599999999999998764 9999998733211 1111110123444444456665 44433 57999996667
Q ss_pred eEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEcc-CCcEEEEEecccccccEEEEEECCCCCEEEEecCC--eE
Q psy12614 102 NIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQIS-DEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA--AV 178 (708)
Q Consensus 102 ~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~-~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d--~i 178 (708)
+++.++.- ..+|.++.+.++ .+++.- .+.|++|... +.+..........+....+++-..+..+||.-+.. .|
T Consensus 86 ~~i~el~f-~~~I~~V~l~r~--riVvvl-~~~I~VytF~~n~k~l~~~et~~NPkGlC~~~~~~~k~~LafPg~k~Gqv 161 (346)
T KOG2111|consen 86 RCIIELSF-NSEIKAVKLRRD--RIVVVL-ENKIYVYTFPDNPKLLHVIETRSNPKGLCSLCPTSNKSLLAFPGFKTGQV 161 (346)
T ss_pred cEEEEEEe-ccceeeEEEcCC--eEEEEe-cCeEEEEEcCCChhheeeeecccCCCceEeecCCCCceEEEcCCCccceE
Confidence 77777764 478999999886 455543 5789999988 44444222222323445555555556677766665 89
Q ss_pred EEEEcCCCce--EEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCc-EEEEeCCCCeeEEEeec--cccCeEEEEE
Q psy12614 179 RVWDIHKGHA--IHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGF-VRFWDGKTGVQWSDVKT--HKKDILALTV 252 (708)
Q Consensus 179 ~iwd~~~~~~--~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~-i~~wd~~~~~~~~~~~~--~~~~i~~~~~ 252 (708)
+|-|+...+. ...+. .|...|.|++.+-+|+ +++++..|+ |+|||..+|+.+..+.- ....|.+++|
T Consensus 162 Qi~dL~~~~~~~p~~I~-------AH~s~Iacv~Ln~~Gt~vATaStkGTLIRIFdt~~g~~l~E~RRG~d~A~iy~iaF 234 (346)
T KOG2111|consen 162 QIVDLASTKPNAPSIIN-------AHDSDIACVALNLQGTLVATASTKGTLIRIFDTEDGTLLQELRRGVDRADIYCIAF 234 (346)
T ss_pred EEEEhhhcCcCCceEEE-------cccCceeEEEEcCCccEEEEeccCcEEEEEEEcCCCcEeeeeecCCchheEEEEEe
Confidence 9999876555 23333 3489999999999996 889999886 88999999999988863 3568999999
Q ss_pred eCCCCEEEEEecCCeEEEEEccC
Q psy12614 253 SEDENYLYCAGVDPTVVCFQRTR 275 (708)
Q Consensus 253 s~~~~~l~~~~~dg~i~iw~~~~ 275 (708)
||+..+|++++..|++.+|.+..
T Consensus 235 Sp~~s~LavsSdKgTlHiF~l~~ 257 (346)
T KOG2111|consen 235 SPNSSWLAVSSDKGTLHIFSLRD 257 (346)
T ss_pred CCCccEEEEEcCCCeEEEEEeec
Confidence 99999999999999999999987
|
|
| >KOG1272|consensus | Back alignment and domain information |
|---|
Probab=99.65 E-value=4.9e-16 Score=144.31 Aligned_cols=270 Identities=16% Similarity=0.180 Sum_probs=208.1
Q ss_pred CceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCCeEEEEEcCCCceEEE
Q psy12614 112 GTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAAAVRVWDIHKGHAIHK 191 (708)
Q Consensus 112 ~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~i~iwd~~~~~~~~~ 191 (708)
-....+.++.+|++|+.|+..|.|..+|+.++++.....+ ...|.++.|-.+.+++|++-...+.||| ..|..+..
T Consensus 130 FGPY~~~ytrnGrhlllgGrKGHlAa~Dw~t~~L~~Ei~v---~Etv~Dv~~LHneq~~AVAQK~y~yvYD-~~GtElHC 205 (545)
T KOG1272|consen 130 FGPYHLDYTRNGRHLLLGGRKGHLAAFDWVTKKLHFEINV---METVRDVTFLHNEQFFAVAQKKYVYVYD-NNGTELHC 205 (545)
T ss_pred cCCeeeeecCCccEEEecCCccceeeeecccceeeeeeeh---hhhhhhhhhhcchHHHHhhhhceEEEec-CCCcEEee
Confidence 3456789999999999999999999999999998743332 4678999999999999988877999999 57888888
Q ss_pred EEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEE
Q psy12614 192 MSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVC 270 (708)
Q Consensus 192 ~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i 270 (708)
+.. ...|..+.|.|.-- |++++..|.+..-|+.+|+.+..+....+.+..++-+|-+..+-+|...|+|.+
T Consensus 206 lk~--------~~~v~rLeFLPyHfLL~~~~~~G~L~Y~DVS~GklVa~~~t~~G~~~vm~qNP~NaVih~GhsnGtVSl 277 (545)
T KOG1272|consen 206 LKR--------HIRVARLEFLPYHFLLVAASEAGFLKYQDVSTGKLVASIRTGAGRTDVMKQNPYNAVIHLGHSNGTVSL 277 (545)
T ss_pred hhh--------cCchhhhcccchhheeeecccCCceEEEeechhhhhHHHHccCCccchhhcCCccceEEEcCCCceEEe
Confidence 764 57788999999874 888899999999999999999999888899999999999989999999999999
Q ss_pred EEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEEEcCCCeEEEEeCCCCceeecCccCCCCceEE
Q psy12614 271 FQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVS 348 (708)
Q Consensus 271 w~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~ 348 (708)
|.... .+ ++..+..|.++|.++++. |.+++|.|.|..++|||++...
T Consensus 278 WSP~s--------ke--------PLvKiLcH~g~V~siAv~~~G~YMaTtG~Dr~~kIWDlR~~~--------------- 326 (545)
T KOG1272|consen 278 WSPNS--------KE--------PLVKILCHRGPVSSIAVDRGGRYMATTGLDRKVKIWDLRNFY--------------- 326 (545)
T ss_pred cCCCC--------cc--------hHHHHHhcCCCcceEEECCCCcEEeecccccceeEeeecccc---------------
Confidence 99887 44 667788999999999999 9999999999999999996542
Q ss_pred EEcCCcEEEEEcCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEEEcCCceEE
Q psy12614 349 LAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYSTESCVRL 428 (708)
Q Consensus 349 ~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~d~~i~i 428 (708)
++..... ..+...+++|..| +||.|....+.|
T Consensus 327 ---------------------------------------------ql~t~~t--p~~a~~ls~Sqkg-lLA~~~G~~v~i 358 (545)
T KOG1272|consen 327 ---------------------------------------------QLHTYRT--PHPASNLSLSQKG-LLALSYGDHVQI 358 (545)
T ss_pred ---------------------------------------------ccceeec--CCCcccccccccc-ceeeecCCeeee
Confidence 1111111 2334567777666 677777778888
Q ss_pred EEEEecCCcceeEEeecCCcccccceeEEEEEecCCCeEEEEecCCc
Q psy12614 429 HSLDLDGDKPQISRIKNLPAPLFKSIFTHVLISADSTLLLAVSLNGP 475 (708)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~~~~~dg~ 475 (708)
|.-........-.. +-.|.-...|..+.|.|-...|-+|...|.
T Consensus 359 w~d~~~~s~~~~~p---Ym~H~~~~~V~~l~FcP~EDvLGIGH~~G~ 402 (545)
T KOG1272|consen 359 WKDALKGSGHGETP---YMNHRCGGPVEDLRFCPYEDVLGIGHAGGI 402 (545)
T ss_pred ehhhhcCCCCCCcc---hhhhccCcccccceeccHHHeeeccccCCc
Confidence 86433211000000 112222335666888887777766655554
|
|
| >PRK03629 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=2.4e-14 Score=145.63 Aligned_cols=225 Identities=13% Similarity=0.085 Sum_probs=156.4
Q ss_pred cceeeeeeeeccCCCCcEEEEEEcCCCCEEEEEeC---CCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEE
Q psy12614 12 GTYGVHNIKFYAPEPKVINCIACEPKSSRLAVSRA---DQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFS 86 (708)
Q Consensus 12 ~~~~~~~~~~~~~h~~~v~~~~~s~~~~~la~~~~---dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s 86 (708)
.+++....+.+..+...+.+.+|||||+.||..+. +..|.+||+.+++.. .+.... +.+..++|+ |+.|+.
T Consensus 184 ~d~dg~~~~~lt~~~~~~~~p~wSPDG~~la~~s~~~g~~~i~i~dl~~G~~~--~l~~~~--~~~~~~~~SPDG~~La~ 259 (429)
T PRK03629 184 SDYDGYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR--QVASFP--RHNGAPAFSPDGSKLAF 259 (429)
T ss_pred EcCCCCCCEEeecCCCceeeeEEcCCCCEEEEEEecCCCcEEEEEECCCCCeE--EccCCC--CCcCCeEECCCCCEEEE
Confidence 33344445556667788999999999999987542 357999999887653 333333 445578999 777775
Q ss_pred E-cCCC--cEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCC-C--cEEEEEccCCcEEEEEecccccccEEE
Q psy12614 87 G-GLQG--FVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQ-G--HINLFQISDEGLLYEKLLDRQQGRILC 160 (708)
Q Consensus 87 ~-~~d~--~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d-~--~i~iwd~~~~~~~~~~~~~~~~~~v~~ 160 (708)
. +.+| .|.+||+++++.... ..+...+...+|+|||+.|+..+.+ + .|+++|+.+++.. .+.........
T Consensus 260 ~~~~~g~~~I~~~d~~tg~~~~l-t~~~~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~~~g~~~---~lt~~~~~~~~ 335 (429)
T PRK03629 260 ALSKTGSLNLYVMDLASGQIRQV-TDGRSNNTEPTWFPDSQNLAYTSDQAGRPQVYKVNINGGAPQ---RITWEGSQNQD 335 (429)
T ss_pred EEcCCCCcEEEEEECCCCCEEEc-cCCCCCcCceEECCCCCEEEEEeCCCCCceEEEEECCCCCeE---EeecCCCCccC
Confidence 4 4454 589999998876544 3344567889999999999877764 3 4555577776653 33333445667
Q ss_pred EEECCCCCEEEEecCC----eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCc---EEEEeCC
Q psy12614 161 TAWHSSGDYLVTGCAA----AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGF---VRFWDGK 232 (708)
Q Consensus 161 ~~~s~d~~~l~~~~~d----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~---i~~wd~~ 232 (708)
..|+|||++|+..+.+ .|.+||+.+++.. .+.. ........|+|||+ ++..+.++. +.++++
T Consensus 336 ~~~SpDG~~Ia~~~~~~g~~~I~~~dl~~g~~~-~Lt~--------~~~~~~p~~SpDG~~i~~~s~~~~~~~l~~~~~- 405 (429)
T PRK03629 336 ADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQ-VLTD--------TFLDETPSIAPNGTMVIYSSSQGMGSVLNLVST- 405 (429)
T ss_pred EEECCCCCEEEEEEccCCCceEEEEECCCCCeE-EeCC--------CCCCCCceECCCCCEEEEEEcCCCceEEEEEEC-
Confidence 8999999999876542 6889999887643 3332 11234678999996 666665553 677787
Q ss_pred CCeeEEEeeccccCeEEEEEeC
Q psy12614 233 TGVQWSDVKTHKKDILALTVSE 254 (708)
Q Consensus 233 ~~~~~~~~~~~~~~i~~~~~s~ 254 (708)
+|.....+.+|.+.+...+|+|
T Consensus 406 ~G~~~~~l~~~~~~~~~p~Wsp 427 (429)
T PRK03629 406 DGRFKARLPATDGQVKFPAWSP 427 (429)
T ss_pred CCCCeEECccCCCCcCCcccCC
Confidence 5666677777888888899987
|
|
| >PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.6e-12 Score=127.93 Aligned_cols=307 Identities=11% Similarity=0.095 Sum_probs=193.0
Q ss_pred CEE-EEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECCCCeEeEEEeecCCceE
Q psy12614 39 SRL-AVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCW 115 (708)
Q Consensus 39 ~~l-a~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~ 115 (708)
+++ ++-..+|.|.|.|..+.+.+. .+.... ..-..+.|+ |+++++++.||.|.++|+.+++.+.++..- ....
T Consensus 6 ~l~~V~~~~~~~v~viD~~t~~~~~-~i~~~~--~~h~~~~~s~Dgr~~yv~~rdg~vsviD~~~~~~v~~i~~G-~~~~ 81 (369)
T PF02239_consen 6 NLFYVVERGSGSVAVIDGATNKVVA-RIPTGG--APHAGLKFSPDGRYLYVANRDGTVSVIDLATGKVVATIKVG-GNPR 81 (369)
T ss_dssp GEEEEEEGGGTEEEEEETTT-SEEE-EEE-ST--TEEEEEE-TT-SSEEEEEETTSEEEEEETTSSSEEEEEE-S-SEEE
T ss_pred cEEEEEecCCCEEEEEECCCCeEEE-EEcCCC--CceeEEEecCCCCEEEEEcCCCeEEEEECCcccEEEEEecC-CCcc
Confidence 344 445678999999999998887 666544 344456777 899999999999999999999999988753 4578
Q ss_pred EEEEecCCCEEEEEe-CCCcEEEEEccCCcEEEEEeccc-----ccccEEEEEECCCCCEEEEecCC--eEEEEEcCCCc
Q psy12614 116 CLSVHKKKRLLAAGT-EQGHINLFQISDEGLLYEKLLDR-----QQGRILCTAWHSSGDYLVTGCAA--AVRVWDIHKGH 187 (708)
Q Consensus 116 ~~~~s~~~~~la~~~-~d~~i~iwd~~~~~~~~~~~~~~-----~~~~v~~~~~s~d~~~l~~~~~d--~i~iwd~~~~~ 187 (708)
.+++|+||+++++++ ..+.+.++|.++.+.+......+ ...++.++..+|....++..-.+ .|.+.|..+.+
T Consensus 82 ~i~~s~DG~~~~v~n~~~~~v~v~D~~tle~v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~lkd~~~I~vVdy~d~~ 161 (369)
T PF02239_consen 82 GIAVSPDGKYVYVANYEPGTVSVIDAETLEPVKTIPTGGMPVDGPESRVAAIVASPGRPEFVVNLKDTGEIWVVDYSDPK 161 (369)
T ss_dssp EEEE--TTTEEEEEEEETTEEEEEETTT--EEEEEE--EE-TTTS---EEEEEE-SSSSEEEEEETTTTEEEEEETTTSS
T ss_pred eEEEcCCCCEEEEEecCCCceeEeccccccceeecccccccccccCCCceeEEecCCCCEEEEEEccCCeEEEEEecccc
Confidence 899999999998775 58999999999988873222221 23578889899999866666555 88888987765
Q ss_pred eEEEEEecccCCCCCceeEEEEEEccCCE--EEEEcCCCcEEEEeCCCCeeEEEee----ccccCeEEEEEeCCCCEEE-
Q psy12614 188 AIHKMSLDKSSKFSKNTAVWCVAFCADFT--IITGDSGGFVRFWDGKTGVQWSDVK----THKKDILALTVSEDENYLY- 260 (708)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--l~~~~~dg~i~~wd~~~~~~~~~~~----~~~~~i~~~~~s~~~~~l~- 260 (708)
.+....... ........|.|+++ +++...+..|.++|.++++.+..+. .|......+ ..|..-.+.
T Consensus 162 ~~~~~~i~~------g~~~~D~~~dpdgry~~va~~~sn~i~viD~~~~k~v~~i~~g~~p~~~~~~~~-php~~g~vw~ 234 (369)
T PF02239_consen 162 NLKVTTIKV------GRFPHDGGFDPDGRYFLVAANGSNKIAVIDTKTGKLVALIDTGKKPHPGPGANF-PHPGFGPVWA 234 (369)
T ss_dssp CEEEEEEE--------TTEEEEEE-TTSSEEEEEEGGGTEEEEEETTTTEEEEEEE-SSSBEETTEEEE-EETTTEEEEE
T ss_pred ccceeeecc------cccccccccCcccceeeecccccceeEEEeeccceEEEEeeccccccccccccc-cCCCcceEEe
Confidence 443322221 45567899999996 4455667899999999998876653 244444443 233321121
Q ss_pred EEe---------cCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEEE----cCCCeEE
Q psy12614 261 CAG---------VDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSG----GLDSYLS 325 (708)
Q Consensus 261 ~~~---------~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~----~~d~~i~ 325 (708)
+.+ ....+.+|+... |.....+....+. .-+..+ +.++... ...+.|.
T Consensus 235 ~~~~~~~~~~~ig~~~v~v~d~~~----------------wkvv~~I~~~G~g-lFi~thP~s~~vwvd~~~~~~~~~v~ 297 (369)
T PF02239_consen 235 TSGLGYFAIPLIGTDPVSVHDDYA----------------WKVVKTIPTQGGG-LFIKTHPDSRYVWVDTFLNPDADTVQ 297 (369)
T ss_dssp EEBSSSSEEEEEE--TTT-STTTB----------------TSEEEEEE-SSSS---EE--TT-SEEEEE-TT-SSHT-EE
T ss_pred eccccceecccccCCccccchhhc----------------CeEEEEEECCCCc-ceeecCCCCccEEeeccCCCCCceEE
Confidence 111 112233344333 4466666665555 555555 7788777 4568999
Q ss_pred EEeCCCCceeecCccCCC--CceEEEEcCCcEEEEE--cCC-eEEEEEecCCC
Q psy12614 326 LSYYPPKTLVKYPCTLAQ--STPVSLAKDIQHVLLQ--YTS-HLELWSLGSAQ 373 (708)
Q Consensus 326 iw~~~~~~~~~~~~~~~~--~~~~~~s~~~~~l~~~--~~~-~i~i~~~~~~~ 373 (708)
++|..+............ ...+.|+++|+.+..+ ..+ .|.+||..+.+
T Consensus 298 viD~~tl~~~~~i~~~~~~~~~h~ef~~dG~~v~vS~~~~~~~i~v~D~~Tl~ 350 (369)
T PF02239_consen 298 VIDKKTLKVVKTITPGPGKRVVHMEFNPDGKEVWVSVWDGNGAIVVYDAKTLK 350 (369)
T ss_dssp EEECCGTEEEE-HHHHHT--EEEEEE-TTSSEEEEEEE--TTEEEEEETTTTE
T ss_pred EEECcCcceeEEEeccCCCcEeccEECCCCCEEEEEEecCCCEEEEEECCCcE
Confidence 999998763322212233 6679999999987753 444 89999998855
|
... |
| >KOG2394|consensus | Back alignment and domain information |
|---|
Probab=99.64 E-value=6.6e-15 Score=139.44 Aligned_cols=246 Identities=15% Similarity=0.146 Sum_probs=159.0
Q ss_pred EEcCCcEEEEEcCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEe-----CCCCcEEEEEc-
Q psy12614 349 LAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVV-----SNDGKYVAYST- 422 (708)
Q Consensus 349 ~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-----s~~g~~l~~~~- 422 (708)
.+-.|..|+......+.+|+...+.. + ...+.+..-... ...|-+| .|++--+.+|-
T Consensus 131 ~~~~gd~lcFnvg~~lyv~~~~g~~~-------------~---~~pi~k~~y~gt-~P~cHdfn~~~a~~~g~dllIGf~ 193 (636)
T KOG2394|consen 131 QSGKGDRLCFNVGRELYVYSYRGAAD-------------L---SKPIDKREYKGT-SPTCHDFNSFTATPKGLDLLIGFT 193 (636)
T ss_pred ccCCCCEEEEecCCeEEEEEccCcch-------------h---ccchhhhcccCC-CCceecccccccCCCCcceEEeec
Confidence 34457788888888889998875330 0 001111111111 1122222 35565566654
Q ss_pred CCceEEEEEEecCCcceeEEeecCCcccccceeEEEEEecCCC-eEEEEecCCcEEEecCC--------------CeEE-
Q psy12614 423 ESCVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVLISADST-LLLAVSLNGPLYIIDLS--------------SLEI- 486 (708)
Q Consensus 423 d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~-~l~~~~~dg~i~~~~~~--------------~~~~- 486 (708)
.|.+.+.+.... .+.++-....+.....++|+.|-|.+. .++++-.+|.+|.++.. ++..
T Consensus 194 tGqvq~idp~~~----~~sklfne~r~i~ktsvT~ikWvpg~~~~Fl~a~~sGnlyly~~~~~~~~t~p~~~~~k~~~~f 269 (636)
T KOG2394|consen 194 TGQVQLIDPINF----EVSKLFNEERLINKSSVTCIKWVPGSDSLFLVAHASGNLYLYDKEIVCGATAPSYQALKDGDQF 269 (636)
T ss_pred cCceEEecchhh----HHHHhhhhcccccccceEEEEEEeCCCceEEEEEecCceEEeeccccccCCCCcccccCCCCee
Confidence 677887776541 111110012222256899999998654 34445566774444211 0000
Q ss_pred --EEEe------cCCCCCccCcceEEEEECCCCcEEEEEecCCeEEEEECCc--eeeecCCCCCCceEEEEcCCCCEEEE
Q psy12614 487 --KYCV------DPYKSNLMSDVISLVQMSECKQYIVCADRKSHVVIWKNGQ--HHASLPRYRKPSTAMAIHPTLSTLVT 556 (708)
Q Consensus 487 --~~~~------~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~--~~~~~~~~~~~v~~l~~s~d~~~l~~ 556 (708)
.... ...+.+.....|+..+|||||++||+.+.||.++|+|+.+ ....+...-+...+++|||||++|++
T Consensus 270 ~i~t~ksk~~rNPv~~w~~~~g~in~f~FS~DG~~LA~VSqDGfLRvF~fdt~eLlg~mkSYFGGLLCvcWSPDGKyIvt 349 (636)
T KOG2394|consen 270 AILTSKSKKTRNPVARWHIGEGSINEFAFSPDGKYLATVSQDGFLRIFDFDTQELLGVMKSYFGGLLCVCWSPDGKYIVT 349 (636)
T ss_pred EEeeeeccccCCccceeEeccccccceeEcCCCceEEEEecCceEEEeeccHHHHHHHHHhhccceEEEEEcCCccEEEe
Confidence 0000 0111222256899999999999999999999999999994 44577778889999999999999999
Q ss_pred EecCCcEEEEEcCCCCCCchhhhhhccCchhhhcCCCCeeEEEeCC----------------------------------
Q psy12614 557 VYSDHRIVEFDLNRKAFTTFSRKLETNHPNEWLSRQLPVLGIEFDP---------------------------------- 602 (708)
Q Consensus 557 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~---------------------------------- 602 (708)
|++|.-|.||.+..++.+ +.-.+|.+-|..|+|.|
T Consensus 350 GGEDDLVtVwSf~erRVV-----------ARGqGHkSWVs~VaFDpytt~~ee~~~~~~~~~~~~~~~~~~~~r~~~~~S 418 (636)
T KOG2394|consen 350 GGEDDLVTVWSFEERRVV-----------ARGQGHKSWVSVVAFDPYTTSTEEWNNFSGMDSTFSDVAHDFEIRANGTGS 418 (636)
T ss_pred cCCcceEEEEEeccceEE-----------EeccccccceeeEeecccccccccccccccccccccchhcccccccCCCCC
Confidence 999999999999999877 44568888888888872
Q ss_pred -CC-------------CceEEEEcCeeEEEEecCCCCC
Q psy12614 603 -QD-------------SSLIYLMDDSALCVINKNKSLA 626 (708)
Q Consensus 603 -~~-------------~~l~~~~~d~~i~~wd~~~~~~ 626 (708)
++ -++.+++.|..+++||+..+.-
T Consensus 419 ~~~~~~s~~~~~~~v~YRfGSVGqDTqlcLWDlteD~L 456 (636)
T KOG2394|consen 419 AEGCPLSSFNRINSVTYRFGSVGQDTQLCLWDLTEDVL 456 (636)
T ss_pred cCCCcccccccccceEEEeecccccceEEEEecchhhc
Confidence 01 1356788899999999986653
|
|
| >KOG2315|consensus | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.5e-12 Score=124.79 Aligned_cols=362 Identities=14% Similarity=0.177 Sum_probs=224.6
Q ss_pred CcEEEEECCCCeEeEEEeec---CCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCC
Q psy12614 91 GFVNEYDMRRLNIKSSTAVT---SGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSG 167 (708)
Q Consensus 91 ~~i~vwd~~~~~~~~~~~~~---~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~ 167 (708)
-.+.+|+............+ ..+++..++|++|+++|.+ .+..++|++..++..+. .... ..+.++.|+|-|
T Consensus 11 e~~~l~~~~~~~~~~~~f~~~~~~~~~~v~~~S~~G~lfA~~-~~~~v~i~~~~~~~~~l--t~~~--~~~~~L~fSP~g 85 (566)
T KOG2315|consen 11 EGFYLFNGPGSKDAVTVFEQNKTSRPCNVFAYSNNGRLFAYS-DNQVVKVFEIATLKVVL--CVEL--KKTYDLLFSPKG 85 (566)
T ss_pred ceeEEeccCCccccccccccCCCCCcceeEEEcCCCcEEEEE-cCCeEEEEEccCCcEEE--Eecc--ceeeeeeecccc
Confidence 34667765553322222222 4457788999999988875 56789999999887542 2221 278999999999
Q ss_pred CEEEEec----------CC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEEEEcCCCcEEEEeCCCCee
Q psy12614 168 DYLVTGC----------AA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQ 236 (708)
Q Consensus 168 ~~l~~~~----------~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~ 236 (708)
++|.+-- .. .+.+|+++++.....+... ...-++..|+.|..+++--..+.+.+|+..+.+.
T Consensus 86 ~yL~T~e~~~i~~~~~~~~pn~~v~~vet~~~~s~~q~k-------~Q~~W~~qfs~dEsl~arlv~nev~f~~~~~f~~ 158 (566)
T KOG2315|consen 86 NYLLTWEPWAIYGPKNASNPNVLVYNVETGVQRSQIQKK-------MQNGWVPQFSIDESLAARLVSNEVQFYDLGSFKT 158 (566)
T ss_pred cccccccccccccCCCCCCCceeeeeeccceehhheehh-------hhcCcccccccchhhhhhhhcceEEEEecCCccc
Confidence 9987521 12 5889999996666555543 2222789999998877777788999999876433
Q ss_pred EEEeeccccCeEEEEEeCCC--CEEEE-----EecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEE
Q psy12614 237 WSDVKTHKKDILALTVSEDE--NYLYC-----AGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLA 309 (708)
Q Consensus 237 ~~~~~~~~~~i~~~~~s~~~--~~l~~-----~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~ 309 (708)
+. -+-|...|..+.+||.+ ..+++ .|.-+.+++|.... +. ... ..........+-..+.
T Consensus 159 ~~-~kl~~~~i~~f~lSpgp~~~~vAvyvPe~kGaPa~vri~~~~~--------~~--~~~---~~a~ksFFkadkvqm~ 224 (566)
T KOG2315|consen 159 IQ-HKLSVSGITMLSLSPGPEPPFVAVYVPEKKGAPASVRIYKYPE--------EG--QHQ---PVANKSFFKADKVQMK 224 (566)
T ss_pred ee-eeeeccceeeEEecCCCCCceEEEEccCCCCCCcEEEEecccc--------cc--ccc---hhhhccccccceeEEE
Confidence 22 23367889999999874 34442 34556899998764 11 000 0000111112222333
Q ss_pred Ee--C-CEEEEEcCCCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEEEcCCeEEEEEecCCCCCCCCCCCCCCcc
Q psy12614 310 LH--G-NRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTTGV 386 (708)
Q Consensus 310 ~~--~-~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~ 386 (708)
|. | .+|+.++.| ++. .+. -.-.+..++++++...
T Consensus 225 WN~~gt~LLvLastd-------VDk--------------------tn~--SYYGEq~Lyll~t~g~-------------- 261 (566)
T KOG2315|consen 225 WNKLGTALLVLASTD-------VDK--------------------TNA--SYYGEQTLYLLATQGE-------------- 261 (566)
T ss_pred eccCCceEEEEEEEe-------ecC--------------------CCc--cccccceEEEEEecCc--------------
Confidence 43 2 122222111 000 000 0012334566665521
Q ss_pred cCCCCceEEEEEEecCCCceEEEEeCCCCcEEEE--Ec-CCceEEEEEEecCCcceeEEeecCCcccccceeEEEEEecC
Q psy12614 387 PLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAY--ST-ESCVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVLISAD 463 (708)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~--~~-d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~d 463 (708)
-..+.....++|.++.|+|+|+-+++ |. -..+.|||+. +...+. ++.. .=.++-|+|.
T Consensus 262 --------s~~V~L~k~GPVhdv~W~~s~~EF~VvyGfMPAkvtifnlr---~~~v~d----f~eg----pRN~~~fnp~ 322 (566)
T KOG2315|consen 262 --------SVSVPLLKEGPVHDVTWSPSGREFAVVYGFMPAKVTIFNLR---GKPVFD----FPEG----PRNTAFFNPH 322 (566)
T ss_pred --------eEEEecCCCCCceEEEECCCCCEEEEEEecccceEEEEcCC---CCEeEe----CCCC----CccceEECCC
Confidence 22333355789999999999998886 55 7889999987 343332 3322 1223899999
Q ss_pred CCeEEEEecCCc-----EEEecCCCeEEEEEecCCCCCccCcceEEEEECCCCcEEEEEe------cCCeEEEEECCcee
Q psy12614 464 STLLLAVSLNGP-----LYIIDLSSLEIKYCVDPYKSNLMSDVISLVQMSECKQYIVCAD------RKSHVVIWKNGQHH 532 (708)
Q Consensus 464 ~~~l~~~~~dg~-----i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~------~d~~i~iw~~~~~~ 532 (708)
|++++.++-+.- +||+... +++..+. ....+-+.|+|||++++|+. .|+.++||++....
T Consensus 323 g~ii~lAGFGNL~G~mEvwDv~n~--K~i~~~~-------a~~tt~~eW~PdGe~flTATTaPRlrvdNg~KiwhytG~~ 393 (566)
T KOG2315|consen 323 GNIILLAGFGNLPGDMEVWDVPNR--KLIAKFK-------AANTTVFEWSPDGEYFLTATTAPRLRVDNGIKIWHYTGSL 393 (566)
T ss_pred CCEEEEeecCCCCCceEEEeccch--hhccccc-------cCCceEEEEcCCCcEEEEEeccccEEecCCeEEEEecCce
Confidence 999999887654 9999875 6666655 33556789999999999987 46889999998333
Q ss_pred eecCCCCCCceEEEEcC
Q psy12614 533 ASLPRYRKPSTAMAIHP 549 (708)
Q Consensus 533 ~~~~~~~~~v~~l~~s~ 549 (708)
.......++...+.|-|
T Consensus 394 l~~~~f~sEL~qv~W~P 410 (566)
T KOG2315|consen 394 LHEKMFKSELLQVEWRP 410 (566)
T ss_pred eehhhhhHhHhheeeee
Confidence 21111112567777776
|
|
| >KOG1272|consensus | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.2e-15 Score=141.75 Aligned_cols=227 Identities=15% Similarity=0.183 Sum_probs=187.8
Q ss_pred CcEEEEEEe--CCEEEEEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEE
Q psy12614 72 NSIECLTWF--NDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEK 149 (708)
Q Consensus 72 ~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~ 149 (708)
..-..+.|+ |..|+.++..|.|..+|+.++++...+... ..|..+.|-.+.+++|++- ...++|||-..-++ .
T Consensus 130 FGPY~~~ytrnGrhlllgGrKGHlAa~Dw~t~~L~~Ei~v~-Etv~Dv~~LHneq~~AVAQ-K~y~yvYD~~GtEl---H 204 (545)
T KOG1272|consen 130 FGPYHLDYTRNGRHLLLGGRKGHLAAFDWVTKKLHFEINVM-ETVRDVTFLHNEQFFAVAQ-KKYVYVYDNNGTEL---H 204 (545)
T ss_pred cCCeeeeecCCccEEEecCCccceeeeecccceeeeeeehh-hhhhhhhhhcchHHHHhhh-hceEEEecCCCcEE---e
Confidence 445678888 999999999999999999999998888754 5789999999999988864 56799999777666 4
Q ss_pred ecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEE
Q psy12614 150 LLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVR 227 (708)
Q Consensus 150 ~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~ 227 (708)
.+..| ..|..+.|-|-.-+|++++.. .++.-|+.+|+.+..+... .+.+..++-+|-+- +-+|..+|+|.
T Consensus 205 Clk~~-~~v~rLeFLPyHfLL~~~~~~G~L~Y~DVS~GklVa~~~t~-------~G~~~vm~qNP~NaVih~GhsnGtVS 276 (545)
T KOG1272|consen 205 CLKRH-IRVARLEFLPYHFLLVAASEAGFLKYQDVSTGKLVASIRTG-------AGRTDVMKQNPYNAVIHLGHSNGTVS 276 (545)
T ss_pred ehhhc-CchhhhcccchhheeeecccCCceEEEeechhhhhHHHHcc-------CCccchhhcCCccceEEEcCCCceEE
Confidence 45443 568999999999888888888 9999999999999998876 77788888888764 66899999999
Q ss_pred EEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEE
Q psy12614 228 FWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKS 307 (708)
Q Consensus 228 ~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~ 307 (708)
+|.....+++..+.+|.++|.++++.++|+++++++.|..++|||++. -. ...+... ......
T Consensus 277 lWSP~skePLvKiLcH~g~V~siAv~~~G~YMaTtG~Dr~~kIWDlR~--------~~--------ql~t~~t-p~~a~~ 339 (545)
T KOG1272|consen 277 LWSPNSKEPLVKILCHRGPVSSIAVDRGGRYMATTGLDRKVKIWDLRN--------FY--------QLHTYRT-PHPASN 339 (545)
T ss_pred ecCCCCcchHHHHHhcCCCcceEEECCCCcEEeecccccceeEeeecc--------cc--------ccceeec-CCCccc
Confidence 999999999999999999999999999999999999999999999998 21 2222222 355677
Q ss_pred EEEeCCEEEEEcCCCeEEEEe
Q psy12614 308 LALHGNRLYSGGLDSYLSLSY 328 (708)
Q Consensus 308 l~~~~~~l~s~~~d~~i~iw~ 328 (708)
++++..-++..+....+.+|.
T Consensus 340 ls~SqkglLA~~~G~~v~iw~ 360 (545)
T KOG1272|consen 340 LSLSQKGLLALSYGDHVQIWK 360 (545)
T ss_pred cccccccceeeecCCeeeeeh
Confidence 888865566666667777874
|
|
| >KOG2321|consensus | Back alignment and domain information |
|---|
Probab=99.62 E-value=5e-14 Score=134.65 Aligned_cols=242 Identities=14% Similarity=0.236 Sum_probs=188.0
Q ss_pred CCCCcEEEEEEcCCCCE-EEEEeCCCcEEEEeCCCCCeEEEEEecCC---------------------------------
Q psy12614 24 PEPKVINCIACEPKSSR-LAVSRADQSIEIWDISETPHVDRVFIGDP--------------------------------- 69 (708)
Q Consensus 24 ~h~~~v~~~~~s~~~~~-la~~~~dg~v~iwd~~~~~~~~~~~~~h~--------------------------------- 69 (708)
+|+..-+.+..+|||+| ||+|..--.|++||+.+-.. .+.-|-
T Consensus 49 e~p~ast~ik~s~DGqY~lAtG~YKP~ikvydlanLSL---KFERhlDae~V~feiLsDD~SK~v~L~~DR~IefHak~G 125 (703)
T KOG2321|consen 49 EMPTASTRIKVSPDGQYLLATGTYKPQIKVYDLANLSL---KFERHLDAEVVDFEILSDDYSKSVFLQNDRTIEFHAKYG 125 (703)
T ss_pred CCccccceeEecCCCcEEEEecccCCceEEEEccccee---eeeecccccceeEEEeccchhhheEeecCceeeehhhcC
Confidence 58888999999999998 57788889999999986321 111111
Q ss_pred ------CCCcEEEEEEe--CCEEEEEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEcc
Q psy12614 70 ------LSNSIECLTWF--NDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQIS 141 (708)
Q Consensus 70 ------~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~ 141 (708)
+...-..++++ .--|+.++....|.-.|++.|+-+..+....+.++++..++-..+|++|+.+|.|..||..
T Consensus 126 ~hy~~RIP~~GRDm~y~~~scDly~~gsg~evYRlNLEqGrfL~P~~~~~~~lN~v~in~~hgLla~Gt~~g~VEfwDpR 205 (703)
T KOG2321|consen 126 RHYRTRIPKFGRDMKYHKPSCDLYLVGSGSEVYRLNLEQGRFLNPFETDSGELNVVSINEEHGLLACGTEDGVVEFWDPR 205 (703)
T ss_pred eeeeeecCcCCccccccCCCccEEEeecCcceEEEEccccccccccccccccceeeeecCccceEEecccCceEEEecch
Confidence 11122333444 3356677777789999999999999999888999999999999999999999999999998
Q ss_pred CCcEEEE----Eecccccc-----cEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEE
Q psy12614 142 DEGLLYE----KLLDRQQG-----RILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAF 211 (708)
Q Consensus 142 ~~~~~~~----~~~~~~~~-----~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 211 (708)
....... .....|.+ .|+++.|+.+|-.+++|+.. .+.|||+++.+++..-.. ...-+|..+.|
T Consensus 206 ~ksrv~~l~~~~~v~s~pg~~~~~svTal~F~d~gL~~aVGts~G~v~iyDLRa~~pl~~kdh------~~e~pi~~l~~ 279 (703)
T KOG2321|consen 206 DKSRVGTLDAASSVNSHPGGDAAPSVTALKFRDDGLHVAVGTSTGSVLIYDLRASKPLLVKDH------GYELPIKKLDW 279 (703)
T ss_pred hhhhheeeecccccCCCccccccCcceEEEecCCceeEEeeccCCcEEEEEcccCCceeeccc------CCccceeeecc
Confidence 7654311 12223333 49999999999999999999 999999999888765543 33788999999
Q ss_pred ccCC--EEEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccC
Q psy12614 212 CADF--TIITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTR 275 (708)
Q Consensus 212 ~~~~--~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~ 275 (708)
.+.+ .-+.......++|||-.+|+....+. ....+..+|+-|++-+++++..++.+..|-+..
T Consensus 280 ~~~~~q~~v~S~Dk~~~kiWd~~~Gk~~asiE-pt~~lND~C~~p~sGm~f~Ane~~~m~~yyiP~ 344 (703)
T KOG2321|consen 280 QDTDQQNKVVSMDKRILKIWDECTGKPMASIE-PTSDLNDFCFVPGSGMFFTANESSKMHTYYIPS 344 (703)
T ss_pred cccCCCceEEecchHHhhhcccccCCceeecc-ccCCcCceeeecCCceEEEecCCCcceeEEccc
Confidence 8764 24444455789999999999988887 455699999999999999999998888776654
|
|
| >KOG3881|consensus | Back alignment and domain information |
|---|
Probab=99.61 E-value=1.1e-13 Score=126.29 Aligned_cols=240 Identities=13% Similarity=0.113 Sum_probs=185.7
Q ss_pred CCcEEEEEEcCCCCE--EEEEeCCCcEEEEeCCCCCeEEE-----EEecCCCCCcEEEEEEeCCEEEEEcCCCcEEEEEC
Q psy12614 26 PKVINCIACEPKSSR--LAVSRADQSIEIWDISETPHVDR-----VFIGDPLSNSIECLTWFNDRLFSGGLQGFVNEYDM 98 (708)
Q Consensus 26 ~~~v~~~~~s~~~~~--la~~~~dg~v~iwd~~~~~~~~~-----~~~~h~~~~~v~~l~~~~~~l~s~~~d~~i~vwd~ 98 (708)
...|+.++|.-+++. |...+.+-.+....+....+... ...+.. ++|..++.....|++|-.+|.+.+|..
T Consensus 55 ~~ris~l~~~~d~~tevl~~r~~~~~~~~~~~~E~~~~s~~~~~~~~~l~~--~~I~gl~~~dg~Litc~~sG~l~~~~~ 132 (412)
T KOG3881|consen 55 LDRISSLLFGVDGETEVLNARSADDDLPKFVIEEFEISSSLDDAKTVSLGT--KSIKGLKLADGTLITCVSSGNLQVRHD 132 (412)
T ss_pred hhhhhhheeecCCceeEeeccccCcccccccccCCcccccccccccccccc--ccccchhhcCCEEEEEecCCcEEEEec
Confidence 456788888776643 33343666777777776655442 334444 788888888889999999999999998
Q ss_pred CCCe----EeEEEeecCCceEEEEEecCCCE-EEEEeCC--CcEEEEEccCCcEEEEEeccc-------ccccEEEEEEC
Q psy12614 99 RRLN----IKSSTAVTSGTCWCLSVHKKKRL-LAAGTEQ--GHINLFQISDEGLLYEKLLDR-------QQGRILCTAWH 164 (708)
Q Consensus 99 ~~~~----~~~~~~~~~~~v~~~~~s~~~~~-la~~~~d--~~i~iwd~~~~~~~~~~~~~~-------~~~~v~~~~~s 164 (708)
+.+. .+..+..+ ..+..|.-++.... +|+|+.. ..+.+||+++.+.++...-.. -.-+++++.|-
T Consensus 133 k~~d~hss~l~~la~g-~g~~~~r~~~~~p~Iva~GGke~~n~lkiwdle~~~qiw~aKNvpnD~L~LrVPvW~tdi~Fl 211 (412)
T KOG3881|consen 133 KSGDLHSSKLIKLATG-PGLYDVRQTDTDPYIVATGGKENINELKIWDLEQSKQIWSAKNVPNDRLGLRVPVWITDIRFL 211 (412)
T ss_pred cCCccccccceeeecC-CceeeeccCCCCCceEecCchhcccceeeeecccceeeeeccCCCCccccceeeeeeccceec
Confidence 8543 33334433 55667777776554 5568888 889999999886653222111 12467788998
Q ss_pred CC--CCEEEEecCC-eEEEEEcCCCc-eEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCeeEEE
Q psy12614 165 SS--GDYLVTGCAA-AVRVWDIHKGH-AIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSD 239 (708)
Q Consensus 165 ~d--~~~l~~~~~d-~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~ 239 (708)
+. ...+|+++.- .+++||.+.++ ++..+... +.+++++...|+++ +++|...|.+..||++.++....
T Consensus 212 ~g~~~~~fat~T~~hqvR~YDt~~qRRPV~~fd~~-------E~~is~~~l~p~gn~Iy~gn~~g~l~~FD~r~~kl~g~ 284 (412)
T KOG3881|consen 212 EGSPNYKFATITRYHQVRLYDTRHQRRPVAQFDFL-------ENPISSTGLTPSGNFIYTGNTKGQLAKFDLRGGKLLGC 284 (412)
T ss_pred CCCCCceEEEEecceeEEEecCcccCcceeEeccc-------cCcceeeeecCCCcEEEEecccchhheecccCceeecc
Confidence 88 7899999998 99999998764 56666654 78899999999996 88999999999999999998877
Q ss_pred -eeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccC
Q psy12614 240 -VKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTR 275 (708)
Q Consensus 240 -~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~ 275 (708)
+.+..+.|+++...|.++++++++-|+.++|+|..+
T Consensus 285 ~~kg~tGsirsih~hp~~~~las~GLDRyvRIhD~kt 321 (412)
T KOG3881|consen 285 GLKGITGSIRSIHCHPTHPVLASCGLDRYVRIHDIKT 321 (412)
T ss_pred ccCCccCCcceEEEcCCCceEEeeccceeEEEeeccc
Confidence 888999999999999999999999999999999988
|
|
| >PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3 | Back alignment and domain information |
|---|
Probab=99.61 E-value=4.4e-11 Score=118.38 Aligned_cols=295 Identities=15% Similarity=0.155 Sum_probs=183.0
Q ss_pred EEEEcCC----CcEEEEEC--CCCeEeEEE-eecCCceEEEEEecCCCEEEEEeC----CCcEEEEEccC--CcEEEEEe
Q psy12614 84 LFSGGLQ----GFVNEYDM--RRLNIKSST-AVTSGTCWCLSVHKKKRLLAAGTE----QGHINLFQISD--EGLLYEKL 150 (708)
Q Consensus 84 l~s~~~d----~~i~vwd~--~~~~~~~~~-~~~~~~v~~~~~s~~~~~la~~~~----d~~i~iwd~~~--~~~~~~~~ 150 (708)
+++|+.. +.|.+|++ ++++....- .........++++|++++|.+... ++.|..|++.. +.+.....
T Consensus 2 ~~vgsy~~~~~~gI~~~~~d~~~g~l~~~~~~~~~~~Ps~l~~~~~~~~LY~~~e~~~~~g~v~~~~i~~~~g~L~~~~~ 81 (345)
T PF10282_consen 2 LYVGSYTNGKGGGIYVFRFDEETGTLTLVQTVAEGENPSWLAVSPDGRRLYVVNEGSGDSGGVSSYRIDPDTGTLTLLNS 81 (345)
T ss_dssp EEEEECCSSSSTEEEEEEEETTTTEEEEEEEEEESSSECCEEE-TTSSEEEEEETTSSTTTEEEEEEEETTTTEEEEEEE
T ss_pred EEEEcCCCCCCCcEEEEEEcCCCCCceEeeeecCCCCCceEEEEeCCCEEEEEEccccCCCCEEEEEECCCcceeEEeee
Confidence 4455554 78988887 555533221 224456677999999999998876 57899999886 45544344
Q ss_pred cccccccEEEEEECCCCCEEEEecCC--eEEEEEcCC-CceEEEEEec-c-----cCCCCCceeEEEEEEccCCE-EEE-
Q psy12614 151 LDRQQGRILCTAWHSSGDYLVTGCAA--AVRVWDIHK-GHAIHKMSLD-K-----SSKFSKNTAVWCVAFCADFT-IIT- 219 (708)
Q Consensus 151 ~~~~~~~v~~~~~s~d~~~l~~~~~d--~i~iwd~~~-~~~~~~~~~~-~-----~~~~~~~~~v~~~~~~~~~~-l~~- 219 (708)
..........++++|++++|+++... .|.++++.. |......... + ...-.......++.|+|||+ +++
T Consensus 82 ~~~~g~~p~~i~~~~~g~~l~vany~~g~v~v~~l~~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v~ 161 (345)
T PF10282_consen 82 VPSGGSSPCHIAVDPDGRFLYVANYGGGSVSVFPLDDDGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYVP 161 (345)
T ss_dssp EEESSSCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEEE
T ss_pred eccCCCCcEEEEEecCCCEEEEEEccCCeEEEEEccCCcccceeeeecccCCCCCcccccccccceeEEECCCCCEEEEE
Confidence 44345566789999999999998764 999999987 4433332111 0 00001245578899999996 433
Q ss_pred EcCCCcEEEEeCCCCe--eE--EEee-ccccCeEEEEEeCCCCEEEEEec-CCeEEEEEccCCcccccCCCCCCCCcceE
Q psy12614 220 GDSGGFVRFWDGKTGV--QW--SDVK-THKKDILALTVSEDENYLYCAGV-DPTVVCFQRTRKPQVCSTSGPEQGSSVWV 293 (708)
Q Consensus 220 ~~~dg~i~~wd~~~~~--~~--~~~~-~~~~~i~~~~~s~~~~~l~~~~~-dg~i~iw~~~~~~~~~~~~g~~~~~~~~~ 293 (708)
--....|.+|++.... .. ..+. ........++|+|+++++++..+ ++.|.++++.. .. ..+.
T Consensus 162 dlG~D~v~~~~~~~~~~~l~~~~~~~~~~G~GPRh~~f~pdg~~~Yv~~e~s~~v~v~~~~~--------~~----g~~~ 229 (345)
T PF10282_consen 162 DLGADRVYVYDIDDDTGKLTPVDSIKVPPGSGPRHLAFSPDGKYAYVVNELSNTVSVFDYDP--------SD----GSLT 229 (345)
T ss_dssp ETTTTEEEEEEE-TTS-TEEEEEEEECSTTSSEEEEEE-TTSSEEEEEETTTTEEEEEEEET--------TT----TEEE
T ss_pred ecCCCEEEEEEEeCCCceEEEeeccccccCCCCcEEEEcCCcCEEEEecCCCCcEEEEeecc--------cC----Ccee
Confidence 3345689999987654 21 2222 24456789999999999877655 67899998883 11 0111
Q ss_pred EeEEEeccccceEEEEEeCCEEEEEcCCCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEEE--cCCeEEEEEecC
Q psy12614 294 RSVNRVIHEGDVKSLALHGNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQ--YTSHLELWSLGS 371 (708)
Q Consensus 294 ~~~~~~~~~~~v~~l~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~--~~~~i~i~~~~~ 371 (708)
........ .. ... .......+.++|||++|.++ ..+.|.+|++..
T Consensus 230 ~~~~~~~~-----------------~~---------------~~~-~~~~~~~i~ispdg~~lyvsnr~~~sI~vf~~d~ 276 (345)
T PF10282_consen 230 EIQTISTL-----------------PE---------------GFT-GENAPAEIAISPDGRFLYVSNRGSNSISVFDLDP 276 (345)
T ss_dssp EEEEEESC-----------------ET---------------TSC-SSSSEEEEEE-TTSSEEEEEECTTTEEEEEEECT
T ss_pred EEEEeeec-----------------cc---------------ccc-ccCCceeEEEecCCCEEEEEeccCCEEEEEEEec
Confidence 11111000 00 000 11244678999999998885 567899999954
Q ss_pred CCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEEEc--CCceEEEEEEecCCccee
Q psy12614 372 AQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYST--ESCVRLHSLDLDGDKPQI 440 (708)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~--d~~i~i~~~~~~~~~~~~ 440 (708)
.. ..................++++|+|++|+++. ++.|.+|+++...+.+..
T Consensus 277 ~~-----------------g~l~~~~~~~~~G~~Pr~~~~s~~g~~l~Va~~~s~~v~vf~~d~~tG~l~~ 330 (345)
T PF10282_consen 277 AT-----------------GTLTLVQTVPTGGKFPRHFAFSPDGRYLYVANQDSNTVSVFDIDPDTGKLTP 330 (345)
T ss_dssp TT-----------------TTEEEEEEEEESSSSEEEEEE-TTSSEEEEEETTTTEEEEEEEETTTTEEEE
T ss_pred CC-----------------CceEEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCeEEEEEEeCCCCcEEE
Confidence 21 11233333333344578999999999999854 789999999865555433
|
1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H. |
| >COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown] | Back alignment and domain information |
|---|
Probab=99.60 E-value=2.5e-11 Score=113.83 Aligned_cols=430 Identities=13% Similarity=0.087 Sum_probs=247.9
Q ss_pred eEEEEEecC--CCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEE-----e-cCC--eEEEEEc
Q psy12614 114 CWCLSVHKK--KRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVT-----G-CAA--AVRVWDI 183 (708)
Q Consensus 114 v~~~~~s~~--~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~-----~-~~d--~i~iwd~ 183 (708)
...+-..|| |..++..+.| .+..+++..++. ..+..+-+.|+...|+|||+.+|. + +.+ .+.+.+.
T Consensus 39 M~n~~l~PDI~GD~IiFt~~D-dlWe~slk~g~~---~ritS~lGVvnn~kf~pdGrkvaf~rv~~~ss~~taDly~v~~ 114 (668)
T COG4946 39 MKNYYLNPDIYGDRIIFTCCD-DLWEYSLKDGKP---LRITSGLGVVNNPKFSPDGRKVAFSRVMLGSSLQTADLYVVPS 114 (668)
T ss_pred hhhhhcCCcccCcEEEEEech-HHHHhhhccCCe---eEEecccceeccccCCCCCcEEEEEEEEecCCCccccEEEEeC
Confidence 333445665 4544443433 256667778877 467778889999999999998886 2 222 6888888
Q ss_pred CCCceEEEEEecccCCCCCceeEEEEEEccCCEEE-EEcCCCcEE----EEeCCC-CeeEEEeeccccCeEEEEEeCCCC
Q psy12614 184 HKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTII-TGDSGGFVR----FWDGKT-GVQWSDVKTHKKDILALTVSEDEN 257 (708)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~-~~~~dg~i~----~wd~~~-~~~~~~~~~~~~~i~~~~~s~~~~ 257 (708)
++|+..+....+ ...-.-.-|.|||.++ +.+...-.. +|.+.. |.....+. -++.+.+.+ .||
T Consensus 115 e~Ge~kRiTyfG-------r~fT~VaG~~~dg~iiV~TD~~tPF~q~~~lYkv~~dg~~~e~Ln--lGpathiv~-~dg- 183 (668)
T COG4946 115 EDGEAKRITYFG-------RRFTRVAGWIPDGEIIVSTDFHTPFSQWTELYKVNVDGIKTEPLN--LGPATHIVI-KDG- 183 (668)
T ss_pred CCCcEEEEEEec-------cccceeeccCCCCCEEEEeccCCCcccceeeeEEccCCceeeecc--CCceeeEEE-eCC-
Confidence 888876655443 2223334688998744 333322111 222211 11112221 233344443 344
Q ss_pred EEEEEecCCe------------EEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe-CCEEEEEcCCCe-
Q psy12614 258 YLYCAGVDPT------------VVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH-GNRLYSGGLDSY- 323 (708)
Q Consensus 258 ~l~~~~~dg~------------i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~-~~~l~s~~~d~~- 323 (708)
.++.|-.--. =.+|--.. +. ..+.....+.+| |.+-..- ++.......||.
T Consensus 184 ~ivigRntydLP~WK~YkGGtrGklWis~d--------~g----~tFeK~vdl~~~---vS~PmIV~~RvYFlsD~eG~G 248 (668)
T COG4946 184 IIVIGRNTYDLPHWKGYKGGTRGKLWISSD--------GG----KTFEKFVDLDGN---VSSPMIVGERVYFLSDHEGVG 248 (668)
T ss_pred EEEEccCcccCcccccccCCccceEEEEec--------CC----cceeeeeecCCC---cCCceEEcceEEEEecccCcc
Confidence 3333321111 12232222 10 111222333333 3332222 333334445554
Q ss_pred -EEEEeCCCCceeecCccCCCCceEEEEcCCcEEEEEcCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecC
Q psy12614 324 -LSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVN 402 (708)
Q Consensus 324 -i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (708)
+.--|++.+.++++. .+..-.+-..+.||+.++....|.|.+||..+.....+.- + ++++..+.. .... ..
T Consensus 249 nlYSvdldGkDlrrHT-nFtdYY~R~~nsDGkrIvFq~~GdIylydP~td~lekldI---~--lpl~rk~k~-~k~~-~p 320 (668)
T COG4946 249 NLYSVDLDGKDLRRHT-NFTDYYPRNANSDGKRIVFQNAGDIYLYDPETDSLEKLDI---G--LPLDRKKKQ-PKFV-NP 320 (668)
T ss_pred ceEEeccCCchhhhcC-CchhccccccCCCCcEEEEecCCcEEEeCCCcCcceeeec---C--Ccccccccc-cccc-CH
Confidence 444466777777777 5555566677889999999999999999988755200000 0 000000000 0000 00
Q ss_pred CCceEEEEeCCCCcEEEEEcCCceEEEEEEecCCcceeEEeecCCcccccceeEEEEEecCCCeEEEEecCCc---EEEe
Q psy12614 403 NATIRCSVVSNDGKYVAYSTESCVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVLISADSTLLLAVSLNGP---LYII 479 (708)
Q Consensus 403 ~~~i~~~~~s~~g~~l~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~~~~~dg~---i~~~ 479 (708)
..-....+. .+|.+++.-+-|...|.+... + ..++ +... ..|.-..+..+++-++.|..||. |++.
T Consensus 321 skyledfa~-~~Gd~ia~VSRGkaFi~~~~~--~-~~iq----v~~~---~~VrY~r~~~~~e~~vigt~dgD~l~iyd~ 389 (668)
T COG4946 321 SKYLEDFAV-VNGDYIALVSRGKAFIMRPWD--G-YSIQ----VGKK---GGVRYRRIQVDPEGDVIGTNDGDKLGIYDK 389 (668)
T ss_pred HHhhhhhcc-CCCcEEEEEecCcEEEECCCC--C-eeEE----cCCC---CceEEEEEccCCcceEEeccCCceEEEEec
Confidence 000111122 267888887777777766543 1 1222 2222 24555677778888899999996 8888
Q ss_pred cCCCeEEEEEecCCCCCccCcceEEEEECCCCcEEEEEecCCeEEEEECCceeeec--CCCCCCceEEEEcCCCCEEEEE
Q psy12614 480 DLSSLEIKYCVDPYKSNLMSDVISLVQMSECKQYIVCADRKSHVVIWKNGQHHASL--PRYRKPSTAMAIHPTLSTLVTV 557 (708)
Q Consensus 480 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~--~~~~~~v~~l~~s~d~~~l~~~ 557 (708)
+++ .++.+... -+.|.++..+|+|++++++.....+-+.|+++...++ ....+-|+.++|+|+++++|.+
T Consensus 390 ~~~---e~kr~e~~-----lg~I~av~vs~dGK~~vvaNdr~el~vididngnv~~idkS~~~lItdf~~~~nsr~iAYa 461 (668)
T COG4946 390 DGG---EVKRIEKD-----LGNIEAVKVSPDGKKVVVANDRFELWVIDIDNGNVRLIDKSEYGLITDFDWHPNSRWIAYA 461 (668)
T ss_pred CCc---eEEEeeCC-----ccceEEEEEcCCCcEEEEEcCceEEEEEEecCCCeeEecccccceeEEEEEcCCceeEEEe
Confidence 777 23334332 4579999999999999999988899999999655433 3344679999999999999988
Q ss_pred ecCC----cEEEEEcCCCCCCchhhhhhccCchhhhcCCCCeeEEEeCCCCCceEEEEc
Q psy12614 558 YSDH----RIVEFDLNRKAFTTFSRKLETNHPNEWLSRQLPVLGIEFDPQDSSLIYLMD 612 (708)
Q Consensus 558 ~~dg----~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~~~~l~~~~~ 612 (708)
--+| .|+++|+.+++... .......-.+-+|.||+++|...+.
T Consensus 462 fP~gy~tq~Iklydm~~~Kiy~------------vTT~ta~DfsPaFD~d~ryLYfLs~ 508 (668)
T COG4946 462 FPEGYYTQSIKLYDMDGGKIYD------------VTTPTAYDFSPAFDPDGRYLYFLSA 508 (668)
T ss_pred cCcceeeeeEEEEecCCCeEEE------------ecCCcccccCcccCCCCcEEEEEec
Confidence 6654 59999999987651 1122233456689999999887654
|
|
| >KOG2394|consensus | Back alignment and domain information |
|---|
Probab=99.60 E-value=2.3e-14 Score=135.84 Aligned_cols=169 Identities=20% Similarity=0.392 Sum_probs=130.6
Q ss_pred cCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEe--cCCCCCcEEEEEEe---CCEEEEEcCCCcEEEEECCCC--------
Q psy12614 35 EPKSSRLAVSRADQSIEIWDISETPHVDRVFI--GDPLSNSIECLTWF---NDRLFSGGLQGFVNEYDMRRL-------- 101 (708)
Q Consensus 35 s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~--~h~~~~~v~~l~~~---~~~l~s~~~d~~i~vwd~~~~-------- 101 (708)
.|++--|.+|-..|.|.+.|....+..+ .+. .+.....|+++.|- ...++.+-.+|.+.++|.+--
T Consensus 182 ~~~g~dllIGf~tGqvq~idp~~~~~sk-lfne~r~i~ktsvT~ikWvpg~~~~Fl~a~~sGnlyly~~~~~~~~t~p~~ 260 (636)
T KOG2394|consen 182 TPKGLDLLIGFTTGQVQLIDPINFEVSK-LFNEERLINKSSVTCIKWVPGSDSLFLVAHASGNLYLYDKEIVCGATAPSY 260 (636)
T ss_pred CCCCcceEEeeccCceEEecchhhHHHH-hhhhcccccccceEEEEEEeCCCceEEEEEecCceEEeeccccccCCCCcc
Confidence 3566678888888999999987633221 222 11123789999999 566777788999999974321
Q ss_pred ------e--------------EeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEE
Q psy12614 102 ------N--------------IKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCT 161 (708)
Q Consensus 102 ------~--------------~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~ 161 (708)
. ++..+..-.+.|...+|+|||++||+.+.||.++|||..+.++. ..++..-+...|+
T Consensus 261 ~~~k~~~~f~i~t~ksk~~rNPv~~w~~~~g~in~f~FS~DG~~LA~VSqDGfLRvF~fdt~eLl--g~mkSYFGGLLCv 338 (636)
T KOG2394|consen 261 QALKDGDQFAILTSKSKKTRNPVARWHIGEGSINEFAFSPDGKYLATVSQDGFLRIFDFDTQELL--GVMKSYFGGLLCV 338 (636)
T ss_pred cccCCCCeeEEeeeeccccCCccceeEeccccccceeEcCCCceEEEEecCceEEEeeccHHHHH--HHHHhhccceEEE
Confidence 1 12222233468889999999999999999999999999998876 5556666889999
Q ss_pred EECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEcc
Q psy12614 162 AWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCA 213 (708)
Q Consensus 162 ~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 213 (708)
+|||||+||++|++| -|.||.+...+.+..-. +|..+|..++|.|
T Consensus 339 cWSPDGKyIvtGGEDDLVtVwSf~erRVVARGq-------GHkSWVs~VaFDp 384 (636)
T KOG2394|consen 339 CWSPDGKYIVTGGEDDLVTVWSFEERRVVARGQ-------GHKSWVSVVAFDP 384 (636)
T ss_pred EEcCCccEEEecCCcceEEEEEeccceEEEecc-------ccccceeeEeecc
Confidence 999999999999999 99999999888776654 5699999999983
|
|
| >PRK04922 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=5.2e-13 Score=136.77 Aligned_cols=230 Identities=10% Similarity=0.006 Sum_probs=149.6
Q ss_pred CcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeC---CCcEEEEEccCCcEEEEEecccccccEEEEEECCCC
Q psy12614 91 GFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTE---QGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSG 167 (708)
Q Consensus 91 ~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~---d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~ 167 (708)
..|.+||..... .+.+..+...+.+.+|+|||+.|+..+. +..|++||+.+++.. .+....+...++.|+|||
T Consensus 184 ~~l~i~D~~g~~-~~~lt~~~~~v~~p~wSpDg~~la~~s~~~~~~~l~~~dl~~g~~~---~l~~~~g~~~~~~~SpDG 259 (433)
T PRK04922 184 YALQVADSDGYN-PQTILRSAEPILSPAWSPDGKKLAYVSFERGRSAIYVQDLATGQRE---LVASFRGINGAPSFSPDG 259 (433)
T ss_pred EEEEEECCCCCC-ceEeecCCCccccccCCCCCCEEEEEecCCCCcEEEEEECCCCCEE---EeccCCCCccCceECCCC
Confidence 469999986543 4456667778999999999999998764 346999999988764 333334455688999999
Q ss_pred CEEEEe-cC--C-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEc-CCCc--EEEEeCCCCeeEEE
Q psy12614 168 DYLVTG-CA--A-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGD-SGGF--VRFWDGKTGVQWSD 239 (708)
Q Consensus 168 ~~l~~~-~~--d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~-~dg~--i~~wd~~~~~~~~~ 239 (708)
+.|+.. +. + .|.+||+.+++... +... .......+|+|||+ ++..+ .+|. |+++|+.+++...
T Consensus 260 ~~l~~~~s~~g~~~Iy~~d~~~g~~~~-lt~~-------~~~~~~~~~spDG~~l~f~sd~~g~~~iy~~dl~~g~~~~- 330 (433)
T PRK04922 260 RRLALTLSRDGNPEIYVMDLGSRQLTR-LTNH-------FGIDTEPTWAPDGKSIYFTSDRGGRPQIYRVAASGGSAER- 330 (433)
T ss_pred CEEEEEEeCCCCceEEEEECCCCCeEE-CccC-------CCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCeEE-
Confidence 988643 33 3 69999998877533 3221 33446789999996 55444 4444 7777877665433
Q ss_pred eeccccCeEEEEEeCCCCEEEEEecCC---eEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCE
Q psy12614 240 VKTHKKDILALTVSEDENYLYCAGVDP---TVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNR 314 (708)
Q Consensus 240 ~~~~~~~i~~~~~s~~~~~l~~~~~dg---~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~ 314 (708)
+..+......++|+|||++|+..+.++ .|.+|++.+ ++ ...+. +........|+ ++.
T Consensus 331 lt~~g~~~~~~~~SpDG~~Ia~~~~~~~~~~I~v~d~~~--------g~---------~~~Lt-~~~~~~~p~~spdG~~ 392 (433)
T PRK04922 331 LTFQGNYNARASVSPDGKKIAMVHGSGGQYRIAVMDLST--------GS---------VRTLT-PGSLDESPSFAPNGSM 392 (433)
T ss_pred eecCCCCccCEEECCCCCEEEEEECCCCceeEEEEECCC--------CC---------eEECC-CCCCCCCceECCCCCE
Confidence 322334455789999999998765443 689999987 53 11222 22233455677 777
Q ss_pred EEEEcCC---CeEEEEeCCCCceeecCccCCCCceEEEEc
Q psy12614 315 LYSGGLD---SYLSLSYYPPKTLVKYPCTLAQSTPVSLAK 351 (708)
Q Consensus 315 l~s~~~d---~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~ 351 (708)
++..+.+ ..+.++++.+.....+..+.......+|+|
T Consensus 393 i~~~s~~~g~~~L~~~~~~g~~~~~l~~~~g~~~~p~wsp 432 (433)
T PRK04922 393 VLYATREGGRGVLAAVSTDGRVRQRLVSADGEVREPAWSP 432 (433)
T ss_pred EEEEEecCCceEEEEEECCCCceEEcccCCCCCCCCccCC
Confidence 6665543 467778887665555542223333344443
|
|
| >PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3 | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.5e-11 Score=121.76 Aligned_cols=283 Identities=16% Similarity=0.164 Sum_probs=178.0
Q ss_pred EEEEecC----CeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEEEcC----CCeEEEEe
Q psy12614 259 LYCAGVD----PTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSGGL----DSYLSLSY 328 (708)
Q Consensus 259 l~~~~~d----g~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~~~----d~~i~iw~ 328 (708)
+++|+.. +.|.+|+++. . ...+..... ..-......++++ +++|++... ++.|..|+
T Consensus 2 ~~vgsy~~~~~~gI~~~~~d~--------~----~g~l~~~~~-~~~~~~Ps~l~~~~~~~~LY~~~e~~~~~g~v~~~~ 68 (345)
T PF10282_consen 2 LYVGSYTNGKGGGIYVFRFDE--------E----TGTLTLVQT-VAEGENPSWLAVSPDGRRLYVVNEGSGDSGGVSSYR 68 (345)
T ss_dssp EEEEECCSSSSTEEEEEEEET--------T----TTEEEEEEE-EEESSSECCEEE-TTSSEEEEEETTSSTTTEEEEEE
T ss_pred EEEEcCCCCCCCcEEEEEEcC--------C----CCCceEeee-ecCCCCCceEEEEeCCCEEEEEEccccCCCCEEEEE
Confidence 4555555 6899998854 1 122322222 2233455667776 778877766 57999998
Q ss_pred CCCC--ceeec---CccCCCCceEEEEcCCcEEEEE--cCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEE--
Q psy12614 329 YPPK--TLVKY---PCTLAQSTPVSLAKDIQHVLLQ--YTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMS-- 399 (708)
Q Consensus 329 ~~~~--~~~~~---~~~~~~~~~~~~s~~~~~l~~~--~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 399 (708)
+... .+..+ ......+..++++|++++++++ .++.+.++++.... .........
T Consensus 69 i~~~~g~L~~~~~~~~~g~~p~~i~~~~~g~~l~vany~~g~v~v~~l~~~g-----------------~l~~~~~~~~~ 131 (345)
T PF10282_consen 69 IDPDTGTLTLLNSVPSGGSSPCHIAVDPDGRFLYVANYGGGSVSVFPLDDDG-----------------SLGEVVQTVRH 131 (345)
T ss_dssp EETTTTEEEEEEEEEESSSCEEEEEECTTSSEEEEEETTTTEEEEEEECTTS-----------------EEEEEEEEEES
T ss_pred ECCCcceeEEeeeeccCCCCcEEEEEecCCCEEEEEEccCCeEEEEEccCCc-----------------ccceeeeeccc
Confidence 8775 33332 2122344568999999999986 68899999998733 011111111
Q ss_pred --------ecCCCceEEEEeCCCCcEEEEEc--CCceEEEEEEecCCcceeEEeecCCcccccceeEEEEEecCCCeEEE
Q psy12614 400 --------AVNNATIRCSVVSNDGKYVAYST--ESCVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVLISADSTLLLA 469 (708)
Q Consensus 400 --------~~~~~~i~~~~~s~~g~~l~~~~--d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~~ 469 (708)
........++.++|||+++++.+ ...|.+|+++.....+.....-.++.. ...++++|+||++++++
T Consensus 132 ~g~g~~~~rq~~~h~H~v~~~pdg~~v~v~dlG~D~v~~~~~~~~~~~l~~~~~~~~~~G---~GPRh~~f~pdg~~~Yv 208 (345)
T PF10282_consen 132 EGSGPNPDRQEGPHPHQVVFSPDGRFVYVPDLGADRVYVYDIDDDTGKLTPVDSIKVPPG---SGPRHLAFSPDGKYAYV 208 (345)
T ss_dssp EEEESSTTTTSSTCEEEEEE-TTSSEEEEEETTTTEEEEEEE-TTS-TEEEEEEEECSTT---SSEEEEEE-TTSSEEEE
T ss_pred CCCCCcccccccccceeEEECCCCCEEEEEecCCCEEEEEEEeCCCceEEEeeccccccC---CCCcEEEEcCCcCEEEE
Confidence 01235678899999999999854 568999999874433322111123332 24556999999999998
Q ss_pred EecCCc---EEEec--CCCeEEEEEecCCCC-CccCcceEEEEECCCCcEEEEEe-cCCeEEEEECC------ceeeecC
Q psy12614 470 VSLNGP---LYIID--LSSLEIKYCVDPYKS-NLMSDVISLVQMSECKQYIVCAD-RKSHVVIWKNG------QHHASLP 536 (708)
Q Consensus 470 ~~~dg~---i~~~~--~~~~~~~~~~~~~~~-~~~~~~i~~~~~s~~~~~l~~~~-~d~~i~iw~~~------~~~~~~~ 536 (708)
...... +++++ .+..+.++.+..... .........++++|||++|+++. ..+.|.+|+++ +....++
T Consensus 209 ~~e~s~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~ispdg~~lyvsnr~~~sI~vf~~d~~~g~l~~~~~~~ 288 (345)
T PF10282_consen 209 VNELSNTVSVFDYDPSDGSLTEIQTISTLPEGFTGENAPAEIAISPDGRFLYVSNRGSNSISVFDLDPATGTLTLVQTVP 288 (345)
T ss_dssp EETTTTEEEEEEEETTTTEEEEEEEEESCETTSCSSSSEEEEEE-TTSSEEEEEECTTTEEEEEEECTTTTTEEEEEEEE
T ss_pred ecCCCCcEEEEeecccCCceeEEEEeeeccccccccCCceeEEEecCCCEEEEEeccCCEEEEEEEecCCCceEEEEEEe
Confidence 887666 77777 444445555544321 10023688999999999998876 56799999994 1222333
Q ss_pred CCCCCceEEEEcCCCCEEEEEec-CCcEEEEEcC--CCCCC
Q psy12614 537 RYRKPSTAMAIHPTLSTLVTVYS-DHRIVEFDLN--RKAFT 574 (708)
Q Consensus 537 ~~~~~v~~l~~s~d~~~l~~~~~-dg~i~vwd~~--~~~~~ 574 (708)
.....++.++++|+|++|+++.. ++.|.+|+++ +|.+.
T Consensus 289 ~~G~~Pr~~~~s~~g~~l~Va~~~s~~v~vf~~d~~tG~l~ 329 (345)
T PF10282_consen 289 TGGKFPRHFAFSPDGRYLYVANQDSNTVSVFDIDPDTGKLT 329 (345)
T ss_dssp ESSSSEEEEEE-TTSSEEEEEETTTTEEEEEEEETTTTEEE
T ss_pred CCCCCccEEEEeCCCCEEEEEecCCCeEEEEEEeCCCCcEE
Confidence 34456899999999999998874 6789999874 55543
|
1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H. |
| >PRK03629 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=9.7e-13 Score=133.98 Aligned_cols=231 Identities=13% Similarity=0.041 Sum_probs=150.5
Q ss_pred CeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEEE----cCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEE
Q psy12614 322 SYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQ----YTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVK 397 (708)
Q Consensus 322 ~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~----~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (708)
..|.++|.+....+.+...........|||||+.++.. ....+.+|++.+++ ...
T Consensus 179 ~~l~~~d~dg~~~~~lt~~~~~~~~p~wSPDG~~la~~s~~~g~~~i~i~dl~~G~---------------------~~~ 237 (429)
T PRK03629 179 YELRVSDYDGYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGA---------------------VRQ 237 (429)
T ss_pred eeEEEEcCCCCCCEEeecCCCceeeeEEcCCCCEEEEEEecCCCcEEEEEECCCCC---------------------eEE
Confidence 37888998877655555333456789999999988863 23468899987754 111
Q ss_pred EEecCCCceEEEEeCCCCcEEEEE-c-CC--ceEEEEEEecCCcceeEEeecCCcccccceeEEEEEecCCCeEEEEecC
Q psy12614 398 MSAVNNATIRCSVVSNDGKYVAYS-T-ES--CVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVLISADSTLLLAVSLN 473 (708)
Q Consensus 398 ~~~~~~~~i~~~~~s~~g~~l~~~-~-d~--~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~~~~~d 473 (708)
+ .........++|+|||+.|+.. . ++ .|++||+.. +. ..+ +..+.. .+....|+|||+.|+..+.+
T Consensus 238 l-~~~~~~~~~~~~SPDG~~La~~~~~~g~~~I~~~d~~t--g~--~~~---lt~~~~--~~~~~~wSPDG~~I~f~s~~ 307 (429)
T PRK03629 238 V-ASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLAS--GQ--IRQ---VTDGRS--NNTEPTWFPDSQNLAYTSDQ 307 (429)
T ss_pred c-cCCCCCcCCeEECCCCCEEEEEEcCCCCcEEEEEECCC--CC--EEE---ccCCCC--CcCceEECCCCCEEEEEeCC
Confidence 1 1122334568999999999863 3 44 477777765 32 222 222222 34458999999999887765
Q ss_pred C-c--EEEecCCCeEEEEEecCCCCCccCcceEEEEECCCCcEEEEEecC---CeEEEEECCceee-ecCCCCCCceEEE
Q psy12614 474 G-P--LYIIDLSSLEIKYCVDPYKSNLMSDVISLVQMSECKQYIVCADRK---SHVVIWKNGQHHA-SLPRYRKPSTAMA 546 (708)
Q Consensus 474 g-~--i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d---~~i~iw~~~~~~~-~~~~~~~~v~~l~ 546 (708)
+ . ||.++....+. ..+.. . ........|||||++|+..+.+ ..|.+||+.+... .+.. ........
T Consensus 308 ~g~~~Iy~~d~~~g~~-~~lt~-~----~~~~~~~~~SpDG~~Ia~~~~~~g~~~I~~~dl~~g~~~~Lt~-~~~~~~p~ 380 (429)
T PRK03629 308 AGRPQVYKVNINGGAP-QRITW-E----GSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLTD-TFLDETPS 380 (429)
T ss_pred CCCceEEEEECCCCCe-EEeec-C----CCCccCEEECCCCCEEEEEEccCCCceEEEEECCCCCeEEeCC-CCCCCCce
Confidence 4 3 88765443222 22221 1 2245578999999999887643 3688899884433 3332 22345788
Q ss_pred EcCCCCEEEEEecCCc---EEEEEcCCCCCCchhhhhhccCchhhhcCCCCeeEEEeCC
Q psy12614 547 IHPTLSTLVTVYSDHR---IVEFDLNRKAFTTFSRKLETNHPNEWLSRQLPVLGIEFDP 602 (708)
Q Consensus 547 ~s~d~~~l~~~~~dg~---i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~ 602 (708)
|+|||++|+.++.++. +.+++++.+... .+.+|.+.+...+|+|
T Consensus 381 ~SpDG~~i~~~s~~~~~~~l~~~~~~G~~~~------------~l~~~~~~~~~p~Wsp 427 (429)
T PRK03629 381 IAPNGTMVIYSSSQGMGSVLNLVSTDGRFKA------------RLPATDGQVKFPAWSP 427 (429)
T ss_pred ECCCCCEEEEEEcCCCceEEEEEECCCCCeE------------ECccCCCCcCCcccCC
Confidence 9999999999988764 777788655432 4446777888889987
|
|
| >KOG2315|consensus | Back alignment and domain information |
|---|
Probab=99.58 E-value=5.9e-12 Score=120.76 Aligned_cols=338 Identities=10% Similarity=0.037 Sum_probs=206.8
Q ss_pred eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCC
Q psy12614 177 AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDE 256 (708)
Q Consensus 177 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~ 256 (708)
.+.+|+.............. .........+++++|++++.+.+..+.|++..++..+.+... ..+..+.|+|-+
T Consensus 12 ~~~l~~~~~~~~~~~~f~~~----~~~~~~~v~~~S~~G~lfA~~~~~~v~i~~~~~~~~~lt~~~--~~~~~L~fSP~g 85 (566)
T KOG2315|consen 12 GFYLFNGPGSKDAVTVFEQN----KTSRPCNVFAYSNNGRLFAYSDNQVVKVFEIATLKVVLCVEL--KKTYDLLFSPKG 85 (566)
T ss_pred eeEEeccCCccccccccccC----CCCCcceeEEEcCCCcEEEEEcCCeEEEEEccCCcEEEEecc--ceeeeeeecccc
Confidence 67778765422222211110 113446788999999988888999999999988864444432 278899999999
Q ss_pred CEEEEE-----ec-----CCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe-CCEEEEEcCCCeEE
Q psy12614 257 NYLYCA-----GV-----DPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH-GNRLYSGGLDSYLS 325 (708)
Q Consensus 257 ~~l~~~-----~~-----dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~-~~~l~s~~~d~~i~ 325 (708)
++|.+- .. ...+.+|+..+ +. ....+......-+...|+ .+.|+.--..+.+.
T Consensus 86 ~yL~T~e~~~i~~~~~~~~pn~~v~~vet--------~~--------~~s~~q~k~Q~~W~~qfs~dEsl~arlv~nev~ 149 (566)
T KOG2315|consen 86 NYLLTWEPWAIYGPKNASNPNVLVYNVET--------GV--------QRSQIQKKMQNGWVPQFSIDESLAARLVSNEVQ 149 (566)
T ss_pred cccccccccccccCCCCCCCceeeeeecc--------ce--------ehhheehhhhcCcccccccchhhhhhhhcceEE
Confidence 988752 11 23577898887 42 111111111122566777 55565555667899
Q ss_pred EEeCCCCceeecCccCCCCceEEEEcCC--cEEEE------EcCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEE
Q psy12614 326 LSYYPPKTLVKYPCTLAQSTPVSLAKDI--QHVLL------QYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVK 397 (708)
Q Consensus 326 iw~~~~~~~~~~~~~~~~~~~~~~s~~~--~~l~~------~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (708)
+|+..+.......-+......+.+||.+ ..+++ +.-..+++|.+..... .....
T Consensus 150 f~~~~~f~~~~~kl~~~~i~~f~lSpgp~~~~vAvyvPe~kGaPa~vri~~~~~~~~------------------~~~~a 211 (566)
T KOG2315|consen 150 FYDLGSFKTIQHKLSVSGITMLSLSPGPEPPFVAVYVPEKKGAPASVRIYKYPEEGQ------------------HQPVA 211 (566)
T ss_pred EEecCCccceeeeeeccceeeEEecCCCCCceEEEEccCCCCCCcEEEEeccccccc------------------cchhh
Confidence 9998875533222235666778888773 34444 1334689998873220 01111
Q ss_pred EEecCCCceEEEEeCCCCcEEEE---Ec-C---------CceEEEEEEecCCcceeEEeecCCcccccceeEEEEEecCC
Q psy12614 398 MSAVNNATIRCSVVSNDGKYVAY---ST-E---------SCVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVLISADS 464 (708)
Q Consensus 398 ~~~~~~~~i~~~~~s~~g~~l~~---~~-d---------~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~ 464 (708)
...-....-..+.|.+-|.-|++ .+ | .++++.+++. ....+. +.. ..+|.++.|+|+|
T Consensus 212 ~ksFFkadkvqm~WN~~gt~LLvLastdVDktn~SYYGEq~Lyll~t~g--~s~~V~----L~k---~GPVhdv~W~~s~ 282 (566)
T KOG2315|consen 212 NKSFFKADKVQMKWNKLGTALLVLASTDVDKTNASYYGEQTLYLLATQG--ESVSVP----LLK---EGPVHDVTWSPSG 282 (566)
T ss_pred hccccccceeEEEeccCCceEEEEEEEeecCCCccccccceEEEEEecC--ceEEEe----cCC---CCCceEEEECCCC
Confidence 11111112234567766654432 22 3 2456665552 221221 332 3367779999999
Q ss_pred CeEEEEecCC--c--EEEecCCCeEEEEEecCCCCCccCcceEEEEECCCCcEEEEEec---CCeEEEEECCceeeecCC
Q psy12614 465 TLLLAVSLNG--P--LYIIDLSSLEIKYCVDPYKSNLMSDVISLVQMSECKQYIVCADR---KSHVVIWKNGQHHASLPR 537 (708)
Q Consensus 465 ~~l~~~~~dg--~--i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~---d~~i~iw~~~~~~~~~~~ 537 (708)
+.++++-.-- . |++++- ..+..+. .++-+++.|+|.|++|+.++- .|.|.|||+.+..+...-
T Consensus 283 ~EF~VvyGfMPAkvtifnlr~---~~v~df~-------egpRN~~~fnp~g~ii~lAGFGNL~G~mEvwDv~n~K~i~~~ 352 (566)
T KOG2315|consen 283 REFAVVYGFMPAKVTIFNLRG---KPVFDFP-------EGPRNTAFFNPHGNIILLAGFGNLPGDMEVWDVPNRKLIAKF 352 (566)
T ss_pred CEEEEEEecccceEEEEcCCC---CEeEeCC-------CCCccceEECCCCCEEEEeecCCCCCceEEEeccchhhcccc
Confidence 8887653221 1 776653 3555554 456778999999999998874 479999999964442222
Q ss_pred CCCCceEEEEcCCCCEEEEEec------CCcEEEEEcCCCCC
Q psy12614 538 YRKPSTAMAIHPTLSTLVTVYS------DHRIVEFDLNRKAF 573 (708)
Q Consensus 538 ~~~~v~~l~~s~d~~~l~~~~~------dg~i~vwd~~~~~~ 573 (708)
-...-+-..|+|||+++++++. |+.++||++.....
T Consensus 353 ~a~~tt~~eW~PdGe~flTATTaPRlrvdNg~KiwhytG~~l 394 (566)
T KOG2315|consen 353 KAANTTVFEWSPDGEYFLTATTAPRLRVDNGIKIWHYTGSLL 394 (566)
T ss_pred ccCCceEEEEcCCCcEEEEEeccccEEecCCeEEEEecCcee
Confidence 2344567899999999999863 78899999987643
|
|
| >PRK05137 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=2.9e-13 Score=138.92 Aligned_cols=225 Identities=9% Similarity=0.053 Sum_probs=156.8
Q ss_pred ccceeeeeeeeccCCCCcEEEEEEcCCCCEEEEEeC---CCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEE
Q psy12614 11 MGTYGVHNIKFYAPEPKVINCIACEPKSSRLAVSRA---DQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLF 85 (708)
Q Consensus 11 ~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~la~~~~---dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~ 85 (708)
+.+.+....+.+..|...+.+.+|||||+.||..+. +..|.+||+.+++.. .+..+. +.+.+.+|+ |+.|+
T Consensus 186 ~~d~dg~~~~~lt~~~~~v~~p~wSpDG~~lay~s~~~g~~~i~~~dl~~g~~~--~l~~~~--g~~~~~~~SPDG~~la 261 (435)
T PRK05137 186 IMDQDGANVRYLTDGSSLVLTPRFSPNRQEITYMSYANGRPRVYLLDLETGQRE--LVGNFP--GMTFAPRFSPDGRKVV 261 (435)
T ss_pred EECCCCCCcEEEecCCCCeEeeEECCCCCEEEEEEecCCCCEEEEEECCCCcEE--EeecCC--CcccCcEECCCCCEEE
Confidence 333444555667788889999999999999998753 467999999988753 455666 778889999 77765
Q ss_pred -EEcCCCc--EEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeC-C--CcEEEEEccCCcEEEEEecccccccEE
Q psy12614 86 -SGGLQGF--VNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTE-Q--GHINLFQISDEGLLYEKLLDRQQGRIL 159 (708)
Q Consensus 86 -s~~~d~~--i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~-d--~~i~iwd~~~~~~~~~~~~~~~~~~v~ 159 (708)
+.+.++. |.+||+.+++. ..+..+.+.....+|+|||+.|+..+. + ..|+++|+.+++.. .+..+.+.+.
T Consensus 262 ~~~~~~g~~~Iy~~d~~~~~~-~~Lt~~~~~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d~~g~~~~---~lt~~~~~~~ 337 (435)
T PRK05137 262 MSLSQGGNTDIYTMDLRSGTT-TRLTDSPAIDTSPSYSPDGSQIVFESDRSGSPQLYVMNADGSNPR---RISFGGGRYS 337 (435)
T ss_pred EEEecCCCceEEEEECCCCce-EEccCCCCccCceeEcCCCCEEEEEECCCCCCeEEEEECCCCCeE---EeecCCCccc
Confidence 5555554 77789988765 345556666778999999999988764 3 36888898877664 3333355567
Q ss_pred EEEECCCCCEEEEecC---C-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEE-EcCC-----CcEEE
Q psy12614 160 CTAWHSSGDYLVTGCA---A-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IIT-GDSG-----GFVRF 228 (708)
Q Consensus 160 ~~~~s~d~~~l~~~~~---d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~-~~~d-----g~i~~ 228 (708)
...|+|||++|+.... + .|.+||+..+. ...+.. ...+..+.|+|||+ ++. .... ..+.+
T Consensus 338 ~~~~SpdG~~ia~~~~~~~~~~i~~~d~~~~~-~~~lt~--------~~~~~~p~~spDG~~i~~~~~~~~~~~~~~L~~ 408 (435)
T PRK05137 338 TPVWSPRGDLIAFTKQGGGQFSIGVMKPDGSG-ERILTS--------GFLVEGPTWAPNGRVIMFFRQTPGSGGAPKLYT 408 (435)
T ss_pred CeEECCCCCEEEEEEcCCCceEEEEEECCCCc-eEeccC--------CCCCCCCeECCCCCEEEEEEccCCCCCcceEEE
Confidence 7899999999987653 2 68889986544 333322 22356789999996 443 3222 35888
Q ss_pred EeCCCCeeEEEeeccccCeEEEEEeC
Q psy12614 229 WDGKTGVQWSDVKTHKKDILALTVSE 254 (708)
Q Consensus 229 wd~~~~~~~~~~~~~~~~i~~~~~s~ 254 (708)
+|+..+.. ..+. ....+...+|+|
T Consensus 409 ~dl~g~~~-~~l~-~~~~~~~p~Wsp 432 (435)
T PRK05137 409 VDLTGRNE-REVP-TPGDASDPAWSP 432 (435)
T ss_pred EECCCCce-EEcc-CCCCccCcccCC
Confidence 88865544 4444 344566677776
|
|
| >PRK02889 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.4e-12 Score=133.04 Aligned_cols=233 Identities=12% Similarity=0.079 Sum_probs=147.8
Q ss_pred CeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEEEc----CCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEE
Q psy12614 322 SYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQY----TSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVK 397 (708)
Q Consensus 322 ~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~----~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (708)
..|.++|.++...+.+..........+|+|||+.++... ...|.+||+.+++ . ..
T Consensus 176 ~~L~~~D~dG~~~~~l~~~~~~v~~p~wSPDG~~la~~s~~~~~~~I~~~dl~~g~--------------------~-~~ 234 (427)
T PRK02889 176 YQLQISDADGQNAQSALSSPEPIISPAWSPDGTKLAYVSFESKKPVVYVHDLATGR--------------------R-RV 234 (427)
T ss_pred cEEEEECCCCCCceEeccCCCCcccceEcCCCCEEEEEEccCCCcEEEEEECCCCC--------------------E-EE
Confidence 467778887665555543444556789999999888642 2459999998765 1 11
Q ss_pred EEecCCCceEEEEeCCCCcEEEE-E-cCCceEEEEEEecCCcceeEEeecCCcccccceeEEEEEecCCCeEEEEecC-C
Q psy12614 398 MSAVNNATIRCSVVSNDGKYVAY-S-TESCVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVLISADSTLLLAVSLN-G 474 (708)
Q Consensus 398 ~~~~~~~~i~~~~~s~~g~~l~~-~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~~~~~d-g 474 (708)
+ ....+.+.+.+|+|||+.|+. . .++...||.++...+. ..+ +..+.. ......|+|||+.|+..+.. +
T Consensus 235 l-~~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~~~--~~~---lt~~~~--~~~~~~wSpDG~~l~f~s~~~g 306 (427)
T PRK02889 235 V-ANFKGSNSAPAWSPDGRTLAVALSRDGNSQIYTVNADGSG--LRR---LTQSSG--IDTEPFFSPDGRSIYFTSDRGG 306 (427)
T ss_pred e-ecCCCCccceEECCCCCEEEEEEccCCCceEEEEECCCCC--cEE---CCCCCC--CCcCeEEcCCCCEEEEEecCCC
Confidence 2 223345668899999999885 3 3788888887653332 233 333322 22337899999999877654 3
Q ss_pred c--EEEecCCCeEEEEEecCCCCCccCcceEEEEECCCCcEEEEEecCC---eEEEEECCceee-ecCCCCCCceEEEEc
Q psy12614 475 P--LYIIDLSSLEIKYCVDPYKSNLMSDVISLVQMSECKQYIVCADRKS---HVVIWKNGQHHA-SLPRYRKPSTAMAIH 548 (708)
Q Consensus 475 ~--i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~---~i~iw~~~~~~~-~~~~~~~~v~~l~~s 548 (708)
. ||.++....+.. .+.. .+ .......|||||++|+..+.++ .|.+||+..... .+.. ........|+
T Consensus 307 ~~~Iy~~~~~~g~~~-~lt~-~g----~~~~~~~~SpDG~~Ia~~s~~~g~~~I~v~d~~~g~~~~lt~-~~~~~~p~~s 379 (427)
T PRK02889 307 APQIYRMPASGGAAQ-RVTF-TG----SYNTSPRISPDGKLLAYISRVGGAFKLYVQDLATGQVTALTD-TTRDESPSFA 379 (427)
T ss_pred CcEEEEEECCCCceE-EEec-CC----CCcCceEECCCCCEEEEEEccCCcEEEEEEECCCCCeEEccC-CCCccCceEC
Confidence 4 888764332221 2211 11 1234678999999999877554 699999984333 3332 2345778999
Q ss_pred CCCCEEEEEecCC---cEEEEEcCCCCCCchhhhhhccCchhhhcCCCCeeEEEeCC
Q psy12614 549 PTLSTLVTVYSDH---RIVEFDLNRKAFTTFSRKLETNHPNEWLSRQLPVLGIEFDP 602 (708)
Q Consensus 549 ~d~~~l~~~~~dg---~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~ 602 (708)
|||+.|+.++.++ .+++.++.. ... ..+..+.+.+...+|+|
T Consensus 380 pdg~~l~~~~~~~g~~~l~~~~~~g-~~~-----------~~l~~~~g~~~~p~wsp 424 (427)
T PRK02889 380 PNGRYILYATQQGGRSVLAAVSSDG-RIK-----------QRLSVQGGDVREPSWGP 424 (427)
T ss_pred CCCCEEEEEEecCCCEEEEEEECCC-Cce-----------EEeecCCCCCCCCccCC
Confidence 9999998887654 355555643 222 22334555677778876
|
|
| >KOG2111|consensus | Back alignment and domain information |
|---|
Probab=99.57 E-value=5.5e-12 Score=112.26 Aligned_cols=218 Identities=14% Similarity=0.264 Sum_probs=155.1
Q ss_pred CcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEeCCEEEEEcCCCcEEEEECC-CCeEeEEEeecC--CceEEEEEecCCC
Q psy12614 48 QSIEIWDISETPHVDRVFIGDPLSNSIECLTWFNDRLFSGGLQGFVNEYDMR-RLNIKSSTAVTS--GTCWCLSVHKKKR 124 (708)
Q Consensus 48 g~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~~~~l~s~~~d~~i~vwd~~-~~~~~~~~~~~~--~~v~~~~~s~~~~ 124 (708)
..|.|||=...+++. .+. +..+|.++.+..++|++.- .+.|.||... ..+.++.+.... ....+++-+.+..
T Consensus 75 NkviIWDD~k~~~i~-el~---f~~~I~~V~l~r~riVvvl-~~~I~VytF~~n~k~l~~~et~~NPkGlC~~~~~~~k~ 149 (346)
T KOG2111|consen 75 NKVIIWDDLKERCII-ELS---FNSEIKAVKLRRDRIVVVL-ENKIYVYTFPDNPKLLHVIETRSNPKGLCSLCPTSNKS 149 (346)
T ss_pred ceEEEEecccCcEEE-EEE---eccceeeEEEcCCeEEEEe-cCeEEEEEcCCChhheeeeecccCCCceEeecCCCCce
Confidence 469999955555543 443 2379999999977777664 5789999988 456666555322 2233333333445
Q ss_pred EEEE-EeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC--eEEEEEcCCCceEEEEEecccCCCC
Q psy12614 125 LLAA-GTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA--AVRVWDIHKGHAIHKMSLDKSSKFS 201 (708)
Q Consensus 125 ~la~-~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d--~i~iwd~~~~~~~~~~~~~~~~~~~ 201 (708)
+||. |-.-|.|.|-|+...+.-....+..|...|.|++.+-+|..+|+++.. -|+|||..+|+.+.++..+ .
T Consensus 150 ~LafPg~k~GqvQi~dL~~~~~~~p~~I~AH~s~Iacv~Ln~~Gt~vATaStkGTLIRIFdt~~g~~l~E~RRG-----~ 224 (346)
T KOG2111|consen 150 LLAFPGFKTGQVQIVDLASTKPNAPSIINAHDSDIACVALNLQGTLVATASTKGTLIRIFDTEDGTLLQELRRG-----V 224 (346)
T ss_pred EEEcCCCccceEEEEEhhhcCcCCceEEEcccCceeEEEEcCCccEEEEeccCcEEEEEEEcCCCcEeeeeecC-----C
Confidence 5665 445799999999866552225788999999999999999999999988 7999999999999999887 4
Q ss_pred CceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCeeEE------------------------EeeccccCeEEEEEeCCC
Q psy12614 202 KNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWS------------------------DVKTHKKDILALTVSEDE 256 (708)
Q Consensus 202 ~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~------------------------~~~~~~~~i~~~~~s~~~ 256 (708)
....|++++|+|++. +++.+..|+|+++.++....-. .+.-..+...-++|-.+.
T Consensus 225 d~A~iy~iaFSp~~s~LavsSdKgTlHiF~l~~~~~~~~~~SSl~~~~~~lpky~~S~wS~~~f~l~~~~~~~~~fg~~~ 304 (346)
T KOG2111|consen 225 DRADIYCIAFSPNSSWLAVSSDKGTLHIFSLRDTENTEDESSSLSFKRLVLPKYFSSEWSFAKFQLPQGTQCIIAFGSET 304 (346)
T ss_pred chheEEEEEeCCCccEEEEEcCCCeEEEEEeecCCCCccccccccccccccchhcccceeEEEEEccCCCcEEEEecCCC
Confidence 478899999999997 7788888999999886532111 011123344556666665
Q ss_pred CEEEEEecCCeEEEEEccC
Q psy12614 257 NYLYCAGVDPTVVCFQRTR 275 (708)
Q Consensus 257 ~~l~~~~~dg~i~iw~~~~ 275 (708)
+.++..+.||.-+-+.+..
T Consensus 305 nsvi~i~~Dgsy~k~~f~~ 323 (346)
T KOG2111|consen 305 NTVIAICADGSYYKFKFDP 323 (346)
T ss_pred CeEEEEEeCCcEEEEEecc
Confidence 6666667777766554443
|
|
| >KOG0974|consensus | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.2e-11 Score=127.36 Aligned_cols=145 Identities=14% Similarity=0.141 Sum_probs=126.3
Q ss_pred EEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECCCCeEeE-EEee
Q psy12614 33 ACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMRRLNIKS-STAV 109 (708)
Q Consensus 33 ~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~~~~~-~~~~ 109 (708)
-++++.-++++|+.-+.|.+|+........ .+.||+ +.|.++.|+ |.++++.+.|.++++|++++.+... ..-+
T Consensus 140 g~s~~~~~i~~gsv~~~iivW~~~~dn~p~-~l~GHe--G~iF~i~~s~dg~~i~s~SdDRsiRlW~i~s~~~~~~~~fg 216 (967)
T KOG0974|consen 140 GDSAEELYIASGSVFGEIIVWKPHEDNKPI-RLKGHE--GSIFSIVTSLDGRYIASVSDDRSIRLWPIDSREVLGCTGFG 216 (967)
T ss_pred eccCcEEEEEeccccccEEEEeccccCCcc-eecccC--CceEEEEEccCCcEEEEEecCcceeeeecccccccCccccc
Confidence 356777789999999999999998444333 799999 999999998 9999999999999999999988776 6679
Q ss_pred cCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEeccccc-ccEEEEEECCCCCEEEEecCC-eEEEEEcCC
Q psy12614 110 TSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQ-GRILCTAWHSSGDYLVTGCAA-AVRVWDIHK 185 (708)
Q Consensus 110 ~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~-~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~ 185 (708)
|...|+.+.|+|+ ++++++.|.+.++|+....++ ..+..|. ..+..++..++...+++++.| .+++|++..
T Consensus 217 HsaRvw~~~~~~n--~i~t~gedctcrvW~~~~~~l---~~y~~h~g~~iw~~~~~~~~~~~vT~g~Ds~lk~~~l~~ 289 (967)
T KOG0974|consen 217 HSARVWACCFLPN--RIITVGEDCTCRVWGVNGTQL---EVYDEHSGKGIWKIAVPIGVIIKVTGGNDSTLKLWDLNG 289 (967)
T ss_pred ccceeEEEEeccc--eeEEeccceEEEEEeccccee---hhhhhhhhcceeEEEEcCCceEEEeeccCcchhhhhhhc
Confidence 9999999999998 899999999999998776655 3666665 568999999999999999999 999999864
|
|
| >KOG2314|consensus | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.2e-11 Score=118.22 Aligned_cols=338 Identities=14% Similarity=0.148 Sum_probs=198.4
Q ss_pred EEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEE
Q psy12614 93 VNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVT 172 (708)
Q Consensus 93 i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~ 172 (708)
...|+.....+...-....=.-+-+.|||-|.||++--..| |.+|--.+-... +.+ .|. .|.-+.|||..+||++
T Consensus 192 svfwN~~~n~p~~ie~RenWTetyv~wSP~GTYL~t~Hk~G-I~lWGG~~f~r~--~RF-~Hp-~Vq~idfSP~EkYLVT 266 (698)
T KOG2314|consen 192 SVFWNSKFNEPSLIEERENWTETYVRWSPKGTYLVTFHKQG-IALWGGESFDRI--QRF-YHP-GVQFIDFSPNEKYLVT 266 (698)
T ss_pred EEEccccCCchhhhhhhhcceeeeEEecCCceEEEEEeccc-eeeecCccHHHH--Hhc-cCC-CceeeecCCccceEEE
Confidence 55676544322221111122345689999999999977665 889965543332 233 344 4889999999999998
Q ss_pred ecC-----------C-eEEEEEcCCCceEEEEEecccCCCCCceeEEE-EEEccCCEEEEEcCCCcEEEEeCCCCeeEEE
Q psy12614 173 GCA-----------A-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWC-VAFCADFTIITGDSGGFVRFWDGKTGVQWSD 239 (708)
Q Consensus 173 ~~~-----------d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~ 239 (708)
-+. . .+.|||+.+|...+.+.... ....++. +.||.|+++++.-....|.||+..+..++..
T Consensus 267 ~s~~p~~~~~~d~e~~~l~IWDI~tG~lkrsF~~~~-----~~~~~WP~frWS~DdKy~Arm~~~sisIyEtpsf~lld~ 341 (698)
T KOG2314|consen 267 YSPEPIIVEEDDNEGQQLIIWDIATGLLKRSFPVIK-----SPYLKWPIFRWSHDDKYFARMTGNSISIYETPSFMLLDK 341 (698)
T ss_pred ecCCccccCcccCCCceEEEEEccccchhcceeccC-----CCccccceEEeccCCceeEEeccceEEEEecCceeeecc
Confidence 653 2 68999999999999888742 1334444 4899999866666668899999877655544
Q ss_pred eeccccCeEEEEEeCCCCEEEEEecC-----CeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--C
Q psy12614 240 VKTHKKDILALTVSEDENYLYCAGVD-----PTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--G 312 (708)
Q Consensus 240 ~~~~~~~i~~~~~s~~~~~l~~~~~d-----g~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~ 312 (708)
-.-....|....|+|.++.||.-... ..+.+-.+.+ ++ .++....|.-.=..+-|. |
T Consensus 342 Kslki~gIr~FswsP~~~llAYwtpe~~~~parvtL~evPs--------~~--------~iRt~nlfnVsDckLhWQk~g 405 (698)
T KOG2314|consen 342 KSLKISGIRDFSWSPTSNLLAYWTPETNNIPARVTLMEVPS--------KR--------EIRTKNLFNVSDCKLHWQKSG 405 (698)
T ss_pred cccCCccccCcccCCCcceEEEEcccccCCcceEEEEecCc--------cc--------eeeeccceeeeccEEEeccCC
Confidence 34455788999999998777643321 1233333333 22 111111111111111121 3
Q ss_pred CEEEEEcCCCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEEEcCCeEEEEEecCCCCCCCCCCCCCCcccCCCCc
Q psy12614 313 NRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFP 392 (708)
Q Consensus 313 ~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (708)
.+|+.--. ..... + +-+.-..+.|+.+.... -|
T Consensus 406 dyLcvkvd-------R~tK~---------------------~--~~g~f~n~eIfrireKd-----------------Ip 438 (698)
T KOG2314|consen 406 DYLCVKVD-------RHTKS---------------------K--VKGQFSNLEIFRIREKD-----------------IP 438 (698)
T ss_pred cEEEEEEE-------eeccc---------------------c--ccceEeeEEEEEeeccC-----------------CC
Confidence 33322100 00000 0 00111235666666543 12
Q ss_pred eEEEEEEecCCCceEEEEeCCCCcEEEE--Ec--CCceEEEEEEecCCcceeEEeecCCcccccceeEEEEEecCCCeEE
Q psy12614 393 RLIVKMSAVNNATIRCSVVSNDGKYVAY--ST--ESCVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVLISADSTLLL 468 (708)
Q Consensus 393 ~~~~~~~~~~~~~i~~~~~s~~g~~l~~--~~--d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~ 468 (708)
...+ .....|...+|.|.|..+++ |. ..++.+|.+++......+ +..++.. ..+.+.|+|.|++++
T Consensus 439 ve~v----elke~vi~FaWEP~gdkF~vi~g~~~k~tvsfY~~e~~~~~~~l--Vk~~dk~----~~N~vfwsPkG~fvv 508 (698)
T KOG2314|consen 439 VEVV----ELKESVIAFAWEPHGDKFAVISGNTVKNTVSFYAVETNIKKPSL--VKELDKK----FANTVFWSPKGRFVV 508 (698)
T ss_pred ceee----ecchheeeeeeccCCCeEEEEEccccccceeEEEeecCCCchhh--hhhhccc----ccceEEEcCCCcEEE
Confidence 2222 23467889999999999987 43 678999999863322222 2223331 234489999999999
Q ss_pred EEecCC---c--EEEecCCCeEEEEEecCCCCCccCcceEEEEECCCCcEEEEEecC
Q psy12614 469 AVSLNG---P--LYIIDLSSLEIKYCVDPYKSNLMSDVISLVQMSECKQYIVCADRK 520 (708)
Q Consensus 469 ~~~~dg---~--i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d 520 (708)
++.--+ . .++.+..+.+...... ....+.+.|.|.|+|+++++.-
T Consensus 509 va~l~s~~g~l~F~D~~~a~~k~~~~~e-------h~~at~veWDPtGRYvvT~ss~ 558 (698)
T KOG2314|consen 509 VAALVSRRGDLEFYDTDYADLKDTASPE-------HFAATEVEWDPTGRYVVTSSSS 558 (698)
T ss_pred EEEecccccceEEEecchhhhhhccCcc-------ccccccceECCCCCEEEEeeeh
Confidence 876543 3 4454433333332222 2356789999999999998743
|
|
| >PRK02889 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=2.6e-13 Score=138.45 Aligned_cols=220 Identities=14% Similarity=0.104 Sum_probs=148.0
Q ss_pred eeeeccCCCCcEEEEEEcCCCCEEEEEeCC---CcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEE-EEcCCC
Q psy12614 18 NIKFYAPEPKVINCIACEPKSSRLAVSRAD---QSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLF-SGGLQG 91 (708)
Q Consensus 18 ~~~~~~~h~~~v~~~~~s~~~~~la~~~~d---g~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~-s~~~d~ 91 (708)
..+.+..+...+.+.+|||||+.||..+.+ ..|.+||+.+++.. .+.... +.+.+.+|+ |+.|+ +.+.+|
T Consensus 187 ~~~~l~~~~~~v~~p~wSPDG~~la~~s~~~~~~~I~~~dl~~g~~~--~l~~~~--g~~~~~~~SPDG~~la~~~~~~g 262 (427)
T PRK02889 187 NAQSALSSPEPIISPAWSPDGTKLAYVSFESKKPVVYVHDLATGRRR--VVANFK--GSNSAPAWSPDGRTLAVALSRDG 262 (427)
T ss_pred CceEeccCCCCcccceEcCCCCEEEEEEccCCCcEEEEEECCCCCEE--EeecCC--CCccceEECCCCCEEEEEEccCC
Confidence 334456778889999999999999987643 35999999988754 344444 566789999 77776 567788
Q ss_pred cEEEEE--CCCCeEeEEEeecCCceEEEEEecCCCEEEEEeC-CCcEEEEEc--cCCcEEEEEecccccccEEEEEECCC
Q psy12614 92 FVNEYD--MRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTE-QGHINLFQI--SDEGLLYEKLLDRQQGRILCTAWHSS 166 (708)
Q Consensus 92 ~i~vwd--~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~-d~~i~iwd~--~~~~~~~~~~~~~~~~~v~~~~~s~d 166 (708)
...+|. +.++. ...+..+.+......|+|||+.|+..+. ++...+|.+ .+++... ..+. ........|+||
T Consensus 263 ~~~Iy~~d~~~~~-~~~lt~~~~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~~~~~g~~~~-lt~~--g~~~~~~~~SpD 338 (427)
T PRK02889 263 NSQIYTVNADGSG-LRRLTQSSGIDTEPFFSPDGRSIYFTSDRGGAPQIYRMPASGGAAQR-VTFT--GSYNTSPRISPD 338 (427)
T ss_pred CceEEEEECCCCC-cEECCCCCCCCcCeEEcCCCCEEEEEecCCCCcEEEEEECCCCceEE-EecC--CCCcCceEECCC
Confidence 766665 54444 4455555566678899999999887664 455566654 4554431 2222 233456789999
Q ss_pred CCEEEEecCC----eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEc-CCC--cEEEEeCCCCeeEE
Q psy12614 167 GDYLVTGCAA----AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGD-SGG--FVRFWDGKTGVQWS 238 (708)
Q Consensus 167 ~~~l~~~~~d----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~-~dg--~i~~wd~~~~~~~~ 238 (708)
|++|+..+.+ .|.+||+.+++... +.. ........|+|||+ ++..+ ..| .+.+.+. ++....
T Consensus 339 G~~Ia~~s~~~g~~~I~v~d~~~g~~~~-lt~--------~~~~~~p~~spdg~~l~~~~~~~g~~~l~~~~~-~g~~~~ 408 (427)
T PRK02889 339 GKLLAYISRVGGAFKLYVQDLATGQVTA-LTD--------TTRDESPSFAPNGRYILYATQQGGRSVLAAVSS-DGRIKQ 408 (427)
T ss_pred CCEEEEEEccCCcEEEEEEECCCCCeEE-ccC--------CCCccCceECCCCCEEEEEEecCCCEEEEEEEC-CCCceE
Confidence 9999876543 69999998876543 321 12235679999996 44443 333 3556666 466666
Q ss_pred EeeccccCeEEEEEeCC
Q psy12614 239 DVKTHKKDILALTVSED 255 (708)
Q Consensus 239 ~~~~~~~~i~~~~~s~~ 255 (708)
.+..+.+.+...+|+|-
T Consensus 409 ~l~~~~g~~~~p~wsp~ 425 (427)
T PRK02889 409 RLSVQGGDVREPSWGPF 425 (427)
T ss_pred EeecCCCCCCCCccCCC
Confidence 66666677778888773
|
|
| >KOG1354|consensus | Back alignment and domain information |
|---|
Probab=99.56 E-value=5.4e-13 Score=119.60 Aligned_cols=250 Identities=14% Similarity=0.210 Sum_probs=173.6
Q ss_pred CCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCe----EEEEEecCC----------CCCcEEEEEEe----CCEEEE
Q psy12614 25 EPKVINCIACEPKSSRLAVSRADQSIEIWDISETPH----VDRVFIGDP----------LSNSIECLTWF----NDRLFS 86 (708)
Q Consensus 25 h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~----~~~~~~~h~----------~~~~v~~l~~~----~~~l~s 86 (708)
..+-|.++.|...|.+||+|..+|.|.++.-..... ....++.|. +...|..+.|. ...++.
T Consensus 24 eadiis~vef~~~Ge~LatGdkgGRVv~f~r~~~~~~ey~~~t~fqshepEFDYLkSleieEKinkIrw~~~~n~a~FLl 103 (433)
T KOG1354|consen 24 EADIISAVEFDHYGERLATGDKGGRVVLFEREKLYKGEYNFQTEFQSHEPEFDYLKSLEIEEKINKIRWLDDGNLAEFLL 103 (433)
T ss_pred hhcceeeEEeecccceEeecCCCCeEEEeecccccccceeeeeeeeccCcccchhhhhhhhhhhhhceecCCCCccEEEE
Confidence 456799999999999999999999999997654321 233565555 34678999998 556778
Q ss_pred EcCCCcEEEEECCCCeE-----------------------------------eEEE-eecCCceEEEEEecCCCEEEEEe
Q psy12614 87 GGLQGFVNEYDMRRLNI-----------------------------------KSST-AVTSGTCWCLSVHKKKRLLAAGT 130 (708)
Q Consensus 87 ~~~d~~i~vwd~~~~~~-----------------------------------~~~~-~~~~~~v~~~~~s~~~~~la~~~ 130 (708)
.+.|.+|++|.+..... .+.+ ..|.-.|.++.++.|+..++++
T Consensus 104 stNdktiKlWKi~er~~k~~~~~~~~~~~~~~~~~lr~p~~~~~~~~vea~prRv~aNaHtyhiNSIS~NsD~Et~lSA- 182 (433)
T KOG1354|consen 104 STNDKTIKLWKIRERGSKKEGYNLPEEGPPGTITSLRLPVEGRHDLEVEASPRRVYANAHTYHINSISVNSDKETFLSA- 182 (433)
T ss_pred ecCCcceeeeeeeccccccccccccccCCCCccceeeceeeccccceeeeeeeeeccccceeEeeeeeecCccceEeec-
Confidence 88999999998654221 1111 2577789999999999998885
Q ss_pred CCCcEEEEEccCCcEEE-EEecccc-----cccEEEEEECCCC-CEEEEecCC-eEEEEEcCCCce------EEEEEecc
Q psy12614 131 EQGHINLFQISDEGLLY-EKLLDRQ-----QGRILCTAWHSSG-DYLVTGCAA-AVRVWDIHKGHA------IHKMSLDK 196 (708)
Q Consensus 131 ~d~~i~iwd~~~~~~~~-~~~~~~~-----~~~v~~~~~s~d~-~~l~~~~~d-~i~iwd~~~~~~------~~~~~~~~ 196 (708)
+|-.|.+|+++--...+ ..-++++ ...|++..|+|.. +.++..+.. +|++-|++.... +...+...
T Consensus 183 DdLRINLWnlei~d~sFnIVDIKP~nmEeLteVITsaEFhp~~cn~f~YSSSKGtIrLcDmR~~aLCd~hsKlfEepedp 262 (433)
T KOG1354|consen 183 DDLRINLWNLEIIDQSFNIVDIKPANMEELTEVITSAEFHPHHCNVFVYSSSKGTIRLCDMRQSALCDAHSKLFEEPEDP 262 (433)
T ss_pred cceeeeeccccccCCceeEEEccccCHHHHHHHHhhhccCHhHccEEEEecCCCcEEEeechhhhhhcchhhhhccccCC
Confidence 57789999987332211 1223333 3568899999965 455555555 999999984221 11111100
Q ss_pred cCC---CCCceeEEEEEEccCCEEEEEcCCCcEEEEeC-CCCeeEEEeecccc---------------CeEEEEEeCCCC
Q psy12614 197 SSK---FSKNTAVWCVAFCADFTIITGDSGGFVRFWDG-KTGVQWSDVKTHKK---------------DILALTVSEDEN 257 (708)
Q Consensus 197 ~~~---~~~~~~v~~~~~~~~~~l~~~~~dg~i~~wd~-~~~~~~~~~~~~~~---------------~i~~~~~s~~~~ 257 (708)
..+ ...-..|..+.|+++|+++..-.--+|++||+ ...+++.+++-|.. .-..++|+.++.
T Consensus 263 ~~rsffseiIsSISDvKFs~sGryilsRDyltvk~wD~nme~~pv~t~~vh~~lr~kLc~lYEnD~IfdKFec~~sg~~~ 342 (433)
T KOG1354|consen 263 SSRSFFSEIISSISDVKFSHSGRYILSRDYLTVKLWDLNMEAKPVETYPVHEYLRSKLCSLYENDAIFDKFECSWSGNDS 342 (433)
T ss_pred cchhhHHHHhhhhhceEEccCCcEEEEeccceeEEEeccccCCcceEEeehHhHHHHHHHHhhccchhheeEEEEcCCcc
Confidence 000 01245578899999998666666679999999 45566666654421 224588999999
Q ss_pred EEEEEecCCeEEEEEccC
Q psy12614 258 YLYCAGVDPTVVCFQRTR 275 (708)
Q Consensus 258 ~l~~~~~dg~i~iw~~~~ 275 (708)
++++|+.....++|+...
T Consensus 343 ~v~TGsy~n~frvf~~~~ 360 (433)
T KOG1354|consen 343 YVMTGSYNNVFRVFNLAR 360 (433)
T ss_pred eEecccccceEEEecCCC
Confidence 999999999999999776
|
|
| >PRK04922 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=2.4e-13 Score=139.21 Aligned_cols=220 Identities=12% Similarity=0.057 Sum_probs=151.8
Q ss_pred eeeeeccCCCCcEEEEEEcCCCCEEEEEeCC---CcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEE-EEcCC
Q psy12614 17 HNIKFYAPEPKVINCIACEPKSSRLAVSRAD---QSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLF-SGGLQ 90 (708)
Q Consensus 17 ~~~~~~~~h~~~v~~~~~s~~~~~la~~~~d---g~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~-s~~~d 90 (708)
...+.+..+...+.+.+|+|||+.||..+.+ ..|.+||+.+++.. .+.... +...+.+|+ |+.|+ +.+.+
T Consensus 194 ~~~~~lt~~~~~v~~p~wSpDg~~la~~s~~~~~~~l~~~dl~~g~~~--~l~~~~--g~~~~~~~SpDG~~l~~~~s~~ 269 (433)
T PRK04922 194 YNPQTILRSAEPILSPAWSPDGKKLAYVSFERGRSAIYVQDLATGQRE--LVASFR--GINGAPSFSPDGRRLALTLSRD 269 (433)
T ss_pred CCceEeecCCCccccccCCCCCCEEEEEecCCCCcEEEEEECCCCCEE--EeccCC--CCccCceECCCCCEEEEEEeCC
Confidence 3445566677889999999999999987643 46999999887753 344444 555678999 77665 44555
Q ss_pred C--cEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeC-CCc--EEEEEccCCcEEEEEecccccccEEEEEECC
Q psy12614 91 G--FVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTE-QGH--INLFQISDEGLLYEKLLDRQQGRILCTAWHS 165 (708)
Q Consensus 91 ~--~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~-d~~--i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~ 165 (708)
| .|.+||+.+++.. .+..+.......+|+|||++|+..+. +|. |+++|+.+++.. .+..+......++|+|
T Consensus 270 g~~~Iy~~d~~~g~~~-~lt~~~~~~~~~~~spDG~~l~f~sd~~g~~~iy~~dl~~g~~~---~lt~~g~~~~~~~~Sp 345 (433)
T PRK04922 270 GNPEIYVMDLGSRQLT-RLTNHFGIDTEPTWAPDGKSIYFTSDRGGRPQIYRVAASGGSAE---RLTFQGNYNARASVSP 345 (433)
T ss_pred CCceEEEEECCCCCeE-ECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCeE---EeecCCCCccCEEECC
Confidence 5 5999999987754 45555555678899999999988764 444 777777777653 2222333455789999
Q ss_pred CCCEEEEecC---C-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcC---CCcEEEEeCCCCeeE
Q psy12614 166 SGDYLVTGCA---A-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDS---GGFVRFWDGKTGVQW 237 (708)
Q Consensus 166 d~~~l~~~~~---d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~---dg~i~~wd~~~~~~~ 237 (708)
||++|+..+. + .|.+||+.+++.. .+.. ........|+|||+ ++..+. .+.|.++++. +...
T Consensus 346 DG~~Ia~~~~~~~~~~I~v~d~~~g~~~-~Lt~--------~~~~~~p~~spdG~~i~~~s~~~g~~~L~~~~~~-g~~~ 415 (433)
T PRK04922 346 DGKKIAMVHGSGGQYRIAVMDLSTGSVR-TLTP--------GSLDESPSFAPNGSMVLYATREGGRGVLAAVSTD-GRVR 415 (433)
T ss_pred CCCEEEEEECCCCceeEEEEECCCCCeE-ECCC--------CCCCCCceECCCCCEEEEEEecCCceEEEEEECC-CCce
Confidence 9999987643 2 6999999887654 3322 12334578999996 444333 2468888874 5555
Q ss_pred EEeeccccCeEEEEEeC
Q psy12614 238 SDVKTHKKDILALTVSE 254 (708)
Q Consensus 238 ~~~~~~~~~i~~~~~s~ 254 (708)
..+..+.+.+...+|+|
T Consensus 416 ~~l~~~~g~~~~p~wsp 432 (433)
T PRK04922 416 QRLVSADGEVREPAWSP 432 (433)
T ss_pred EEcccCCCCCCCCccCC
Confidence 66655666777777776
|
|
| >COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.4e-11 Score=116.80 Aligned_cols=355 Identities=10% Similarity=0.091 Sum_probs=237.3
Q ss_pred cEEE-EeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCE
Q psy12614 49 SIEI-WDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRL 125 (708)
Q Consensus 49 ~v~i-wd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 125 (708)
.|.+ |+..+ ......+.... -++..++|| |.+|++.... .|.+|.-..+..+..+. ...|..+.|||.+++
T Consensus 12 ~i~~f~~~~s-~~~~~~~~~~~--~p~~~~~~SP~G~~l~~~~~~-~V~~~~g~~~~~l~~~~--~~~V~~~~fSP~~kY 85 (561)
T COG5354 12 VISVFWNSQS-EVIHTRFESEN--WPVAYVSESPLGTYLFSEHAA-GVECWGGPSKAKLVRFR--HPDVKYLDFSPNEKY 85 (561)
T ss_pred eEEEeecCcc-ccccccccccC--cchhheeecCcchheehhhcc-ceEEccccchhheeeee--cCCceecccCcccce
Confidence 4444 44443 33332444444 789999999 7777776654 58899988766444443 257999999999999
Q ss_pred EEEEeCC---------------CcEEEEEccCCcEEEEEeccccccc--EE-EEEECCCCCEEEEecCCeEEEEEcCCCc
Q psy12614 126 LAAGTEQ---------------GHINLFQISDEGLLYEKLLDRQQGR--IL-CTAWHSSGDYLVTGCAAAVRVWDIHKGH 187 (708)
Q Consensus 126 la~~~~d---------------~~i~iwd~~~~~~~~~~~~~~~~~~--v~-~~~~s~d~~~l~~~~~d~i~iwd~~~~~ 187 (708)
|.+-+.. +.+.+||+.++.++ ..+.....+ .. -+.|+-+.+++|-...+.+.|+++...-
T Consensus 86 L~tw~~~pi~~pe~e~sp~~~~n~~~vwd~~sg~iv--~sf~~~~q~~~~Wp~~k~s~~D~y~ARvv~~sl~i~e~t~n~ 163 (561)
T COG5354 86 LVTWSREPIIEPEIEISPFTSKNNVFVWDIASGMIV--FSFNGISQPYLGWPVLKFSIDDKYVARVVGSSLYIHEITDNI 163 (561)
T ss_pred eeeeccCCccChhhccCCccccCceeEEeccCceeE--eeccccCCcccccceeeeeecchhhhhhccCeEEEEecCCcc
Confidence 9986543 34999999999998 455444433 44 6789999999887766689999973222
Q ss_pred eEEEEEecccCCCCCceeEEEEEEccCC---EEE-----EEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEE
Q psy12614 188 AIHKMSLDKSSKFSKNTAVWCVAFCADF---TII-----TGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYL 259 (708)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~---~l~-----~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l 259 (708)
....+... ....+....|+|.+ .|+ ..+..+.+++|.+..++.+.+-.-....=..+.|.+.|++|
T Consensus 164 ~~~p~~~l------r~~gi~dFsisP~~n~~~la~~tPEk~~kpa~~~i~sIp~~s~l~tk~lfk~~~~qLkW~~~g~~l 237 (561)
T COG5354 164 EEHPFKNL------RPVGILDFSISPEGNHDELAYWTPEKLNKPAMVRILSIPKNSVLVTKNLFKVSGVQLKWQVLGKYL 237 (561)
T ss_pred ccCchhhc------cccceeeEEecCCCCCceEEEEccccCCCCcEEEEEEccCCCeeeeeeeEeecccEEEEecCCceE
Confidence 22222111 14568888999975 244 34567899999998777766544344444678899999887
Q ss_pred EEEec-----------CCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCE--EEEEcCCCeE
Q psy12614 260 YCAGV-----------DPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNR--LYSGGLDSYL 324 (708)
Q Consensus 260 ~~~~~-----------dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~--l~s~~~d~~i 324 (708)
.+--. ...++++++.. .. ......-.++|...+|. ++. +++|-.+..+
T Consensus 238 l~l~~t~~ksnKsyfgesnLyl~~~~e--------~~---------i~V~~~~~~pVhdf~W~p~S~~F~vi~g~~pa~~ 300 (561)
T COG5354 238 LVLVMTHTKSNKSYFGESNLYLLRITE--------RS---------IPVEKDLKDPVHDFTWEPLSSRFAVISGYMPASV 300 (561)
T ss_pred EEEEEEeeecccceeccceEEEEeecc--------cc---------cceeccccccceeeeecccCCceeEEecccccce
Confidence 64211 24577777765 21 11122457889999996 444 4445688899
Q ss_pred EEEeCCCCceeecCccCCCCceEEEEcCCcEEEE-Ec---CCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEe
Q psy12614 325 SLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLL-QY---TSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSA 400 (708)
Q Consensus 325 ~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~-~~---~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (708)
.++|++++ ++-.. +......+.|+|.+++++. +. .+.+.+|+..... .+.....
T Consensus 301 s~~~lr~N-l~~~~-Pe~~rNT~~fsp~~r~il~agF~nl~gni~i~~~~~rf--------------------~~~~~~~ 358 (561)
T COG5354 301 SVFDLRGN-LRFYF-PEQKRNTIFFSPHERYILFAGFDNLQGNIEIFDPAGRF--------------------KVAGAFN 358 (561)
T ss_pred eecccccc-eEEec-CCcccccccccCcccEEEEecCCccccceEEeccCCce--------------------EEEEEee
Confidence 99999988 33333 4667788999999999987 33 3579999987643 3432222
Q ss_pred cCCCceEEEEeCCCCcEEEEE-------cCCceEEEEEEecCCcceeEEeecCCcccccceeEEEEEecCCCeEEEEecC
Q psy12614 401 VNNATIRCSVVSNDGKYVAYS-------TESCVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVLISADSTLLLAVSLN 473 (708)
Q Consensus 401 ~~~~~i~~~~~s~~g~~l~~~-------~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~~~~~d 473 (708)
+ ....-+.|+|||+++.+. .|..+.||++.. .. .+ ..+.+.|.|.|++..+.+..
T Consensus 359 ~--~n~s~~~wspd~qF~~~~~ts~k~~~Dn~i~l~~v~g--~~-~f-------------el~~~~W~p~~~~~ttsSs~ 420 (561)
T COG5354 359 G--LNTSYCDWSPDGQFYDTDTTSEKLRVDNSIKLWDVYG--AK-VF-------------ELTNITWDPSGQYVTTSSSC 420 (561)
T ss_pred c--CCceEeeccCCceEEEecCCCcccccCcceEEEEecC--ch-hh-------------hhhhccccCCcccceeeccC
Confidence 2 334557899999999863 278899999974 11 11 22237888888877766555
Q ss_pred C
Q psy12614 474 G 474 (708)
Q Consensus 474 g 474 (708)
.
T Consensus 421 ~ 421 (561)
T COG5354 421 P 421 (561)
T ss_pred C
Confidence 4
|
|
| >COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.56 E-value=8.2e-11 Score=107.55 Aligned_cols=304 Identities=13% Similarity=0.139 Sum_probs=190.4
Q ss_pred CCcEEEEECCCCe--E-eEEEeecCCceEEEEEecCCCEEEEEeC---CCcEEEEEccC--CcEEEEEecccccccEEEE
Q psy12614 90 QGFVNEYDMRRLN--I-KSSTAVTSGTCWCLSVHKKKRLLAAGTE---QGHINLFQISD--EGLLYEKLLDRQQGRILCT 161 (708)
Q Consensus 90 d~~i~vwd~~~~~--~-~~~~~~~~~~v~~~~~s~~~~~la~~~~---d~~i~iwd~~~--~~~~~~~~~~~~~~~v~~~ 161 (708)
+.-|.+|++.+.. . ...+-...+.++-|+|+|++++|.++.. +|.|.-|.++. |++...........+-..+
T Consensus 15 s~gI~v~~ld~~~g~l~~~~~v~~~~nptyl~~~~~~~~LY~v~~~~~~ggvaay~iD~~~G~Lt~ln~~~~~g~~p~yv 94 (346)
T COG2706 15 SQGIYVFNLDTKTGELSLLQLVAELGNPTYLAVNPDQRHLYVVNEPGEEGGVAAYRIDPDDGRLTFLNRQTLPGSPPCYV 94 (346)
T ss_pred CCceEEEEEeCcccccchhhhccccCCCceEEECCCCCEEEEEEecCCcCcEEEEEEcCCCCeEEEeeccccCCCCCeEE
Confidence 5779999988432 1 1223355678899999999999988755 47788888774 6665433333333444899
Q ss_pred EECCCCCEEEEecCC--eEEEEEcCC-CceEEEEEec-c---cCCC-CCceeEEEEEEccCCE-EEEEcC-CCcEEEEeC
Q psy12614 162 AWHSSGDYLVTGCAA--AVRVWDIHK-GHAIHKMSLD-K---SSKF-SKNTAVWCVAFCADFT-IITGDS-GGFVRFWDG 231 (708)
Q Consensus 162 ~~s~d~~~l~~~~~d--~i~iwd~~~-~~~~~~~~~~-~---~~~~-~~~~~v~~~~~~~~~~-l~~~~~-dg~i~~wd~ 231 (708)
+++++|++|+++... .|.++-++. |......... + ..|. ....-+....+.|+++ +++.+. .-.|.+|++
T Consensus 95 svd~~g~~vf~AnY~~g~v~v~p~~~dG~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~DLG~Dri~~y~~ 174 (346)
T COG2706 95 SVDEDGRFVFVANYHSGSVSVYPLQADGSLQPVVQVVKHTGSGPHERQESPHVHSANFTPDGRYLVVPDLGTDRIFLYDL 174 (346)
T ss_pred EECCCCCEEEEEEccCceEEEEEcccCCccccceeeeecCCCCCCccccCCccceeeeCCCCCEEEEeecCCceEEEEEc
Confidence 999999999999877 899999865 4433322211 0 0000 0012277889999997 444332 346999999
Q ss_pred CCCeeEEEee---ccccCeEEEEEeCCCCEEEEEec-CCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEE
Q psy12614 232 KTGVQWSDVK---THKKDILALTVSEDENYLYCAGV-DPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKS 307 (708)
Q Consensus 232 ~~~~~~~~~~---~~~~~i~~~~~s~~~~~l~~~~~-dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~ 307 (708)
..|.....-. .....-.-|+|.|++++.++.++ +++|.+|.... .. . ....++.+.
T Consensus 175 ~dg~L~~~~~~~v~~G~GPRHi~FHpn~k~aY~v~EL~stV~v~~y~~--------~~----g---~~~~lQ~i~----- 234 (346)
T COG2706 175 DDGKLTPADPAEVKPGAGPRHIVFHPNGKYAYLVNELNSTVDVLEYNP--------AV----G---KFEELQTID----- 234 (346)
T ss_pred ccCccccccccccCCCCCcceEEEcCCCcEEEEEeccCCEEEEEEEcC--------CC----c---eEEEeeeec-----
Confidence 9876533211 24456788999999998887665 78899998876 10 0 111111000
Q ss_pred EEEeCCEEEEEcCCCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEEEcCCeEEEEEecCCCCCCCCCCCCCCccc
Q psy12614 308 LALHGNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTTGVP 387 (708)
Q Consensus 308 l~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~ 387 (708)
.++ ..
T Consensus 235 ----------------------------tlP--------------------------------~d--------------- 239 (346)
T COG2706 235 ----------------------------TLP--------------------------------ED--------------- 239 (346)
T ss_pred ----------------------------cCc--------------------------------cc---------------
Confidence 000 00
Q ss_pred CCCCceEEEEEEecCCCceEEEEeCCCCcEEEEEc--CCceEEEEEEecCCcceeEEeecCCcccccceeEEEEEecCCC
Q psy12614 388 LLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYST--ESCVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVLISADST 465 (708)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~--d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~ 465 (708)
-.......++.+++||++|.+++ ...|.+|.+....+.+.+.... +.+.. ..+...|+++|+
T Consensus 240 ------------F~g~~~~aaIhis~dGrFLYasNRg~dsI~~f~V~~~~g~L~~~~~~--~teg~--~PR~F~i~~~g~ 303 (346)
T COG2706 240 ------------FTGTNWAAAIHISPDGRFLYASNRGHDSIAVFSVDPDGGKLELVGIT--PTEGQ--FPRDFNINPSGR 303 (346)
T ss_pred ------------cCCCCceeEEEECCCCCEEEEecCCCCeEEEEEEcCCCCEEEEEEEe--ccCCc--CCccceeCCCCC
Confidence 01234456778889999988876 5578888888765555444322 22222 123389999999
Q ss_pred eEEEEecCCc---EEEecCCCeEEEEEecCCCCCccCcceEEEEEC
Q psy12614 466 LLLAVSLNGP---LYIIDLSSLEIKYCVDPYKSNLMSDVISLVQMS 508 (708)
Q Consensus 466 ~l~~~~~dg~---i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s 508 (708)
+|+++..++. +|..+..++++-....... .....|+.|.
T Consensus 304 ~Liaa~q~sd~i~vf~~d~~TG~L~~~~~~~~----~p~Pvcv~f~ 345 (346)
T COG2706 304 FLIAANQKSDNITVFERDKETGRLTLLGRYAV----VPEPVCVKFL 345 (346)
T ss_pred EEEEEccCCCcEEEEEEcCCCceEEecccccC----CCCcEEEEEc
Confidence 9999998877 8888776655544433222 2244566653
|
|
| >COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.55 E-value=1.8e-11 Score=115.99 Aligned_cols=355 Identities=13% Similarity=0.101 Sum_probs=219.3
Q ss_pred EEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEe
Q psy12614 94 NEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTG 173 (708)
Q Consensus 94 ~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~ 173 (708)
.+|+-.+...-..+....-++....+||.|.+|++....+ |.+|+-.....+ ..+. ...|..+.|+|.++||.+-
T Consensus 15 ~f~~~~s~~~~~~~~~~~~p~~~~~~SP~G~~l~~~~~~~-V~~~~g~~~~~l--~~~~--~~~V~~~~fSP~~kYL~tw 89 (561)
T COG5354 15 VFWNSQSEVIHTRFESENWPVAYVSESPLGTYLFSEHAAG-VECWGGPSKAKL--VRFR--HPDVKYLDFSPNEKYLVTW 89 (561)
T ss_pred EeecCccccccccccccCcchhheeecCcchheehhhccc-eEEccccchhhe--eeee--cCCceecccCcccceeeee
Confidence 3455555444445554667889999999999999876554 899988776643 3332 3458999999999999986
Q ss_pred cCC----------------eEEEEEcCCCceEEEEEecccCCCCCceeEE-EEEEccCCEEEEEcCCCcEEEEeCCCCee
Q psy12614 174 CAA----------------AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVW-CVAFCADFTIITGDSGGFVRFWDGKTGVQ 236 (708)
Q Consensus 174 ~~d----------------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~l~~~~~dg~i~~wd~~~~~~ 236 (708)
+.. .+.+||..+|..+..+.... .....+ -+.|+-+..+++--....+.++++ ++..
T Consensus 90 ~~~pi~~pe~e~sp~~~~n~~~vwd~~sg~iv~sf~~~~-----q~~~~Wp~~k~s~~D~y~ARvv~~sl~i~e~-t~n~ 163 (561)
T COG5354 90 SREPIIEPEIEISPFTSKNNVFVWDIASGMIVFSFNGIS-----QPYLGWPVLKFSIDDKYVARVVGSSLYIHEI-TDNI 163 (561)
T ss_pred ccCCccChhhccCCccccCceeEEeccCceeEeeccccC-----CcccccceeeeeecchhhhhhccCeEEEEec-CCcc
Confidence 543 38999999999998887652 122245 567887776444335567999997 3322
Q ss_pred E-EEeec-cccCeEEEEEeCCCC--EEEE-----EecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEE
Q psy12614 237 W-SDVKT-HKKDILALTVSEDEN--YLYC-----AGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKS 307 (708)
Q Consensus 237 ~-~~~~~-~~~~i~~~~~s~~~~--~l~~-----~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~ 307 (708)
. ..+.. ....|....++|.++ .|+. .+.++.+++|.+.. +. .+......
T Consensus 164 ~~~p~~~lr~~gi~dFsisP~~n~~~la~~tPEk~~kpa~~~i~sIp~--------~s--------~l~tk~lf------ 221 (561)
T COG5354 164 EEHPFKNLRPVGILDFSISPEGNHDELAYWTPEKLNKPAMVRILSIPK--------NS--------VLVTKNLF------ 221 (561)
T ss_pred ccCchhhccccceeeEEecCCCCCceEEEEccccCCCCcEEEEEEccC--------CC--------eeeeeeeE------
Confidence 1 11111 135678888888752 2221 22333444444433 21 01100000
Q ss_pred EEEeCCEEEEEcCCCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEE------------EcCCeEEEEEecCCCCC
Q psy12614 308 LALHGNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLL------------QYTSHLELWSLGSAQST 375 (708)
Q Consensus 308 l~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~------------~~~~~i~i~~~~~~~~~ 375 (708)
....-.+-+.+.|+++++ -....++++++....
T Consensus 222 ---------------------------------k~~~~qLkW~~~g~~ll~l~~t~~ksnKsyfgesnLyl~~~~e~~-- 266 (561)
T COG5354 222 ---------------------------------KVSGVQLKWQVLGKYLLVLVMTHTKSNKSYFGESNLYLLRITERS-- 266 (561)
T ss_pred ---------------------------------eecccEEEEecCCceEEEEEEEeeecccceeccceEEEEeecccc--
Confidence 011122333344443332 022456777766422
Q ss_pred CCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEE--Ec-CCceEEEEEEecCCcceeEEeecCCccccc
Q psy12614 376 DLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAY--ST-ESCVRLHSLDLDGDKPQISRIKNLPAPLFK 452 (708)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~--~~-d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~ 452 (708)
..+.....++|...+|.|+++.+++ |. +..+.++++.. .+... ++... .
T Consensus 267 --------------------i~V~~~~~~pVhdf~W~p~S~~F~vi~g~~pa~~s~~~lr~---Nl~~~----~Pe~~-r 318 (561)
T COG5354 267 --------------------IPVEKDLKDPVHDFTWEPLSSRFAVISGYMPASVSVFDLRG---NLRFY----FPEQK-R 318 (561)
T ss_pred --------------------cceeccccccceeeeecccCCceeEEecccccceeeccccc---ceEEe----cCCcc-c
Confidence 2222245689999999999998887 34 88899999985 23333 34332 2
Q ss_pred ceeEEEEEecCCCeEEEEecCCc-----EEEecCCCeEEEEEecCCCCCccCcceEEEEECCCCcEEEEEe------cCC
Q psy12614 453 SIFTHVLISADSTLLLAVSLNGP-----LYIIDLSSLEIKYCVDPYKSNLMSDVISLVQMSECKQYIVCAD------RKS 521 (708)
Q Consensus 453 ~~i~~~~~s~d~~~l~~~~~dg~-----i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~------~d~ 521 (708)
.. +.|||.++++++++-+.. +|+.... ...+..+. .....-+.|+||++++.+.. .|.
T Consensus 319 NT---~~fsp~~r~il~agF~nl~gni~i~~~~~r-f~~~~~~~-------~~n~s~~~wspd~qF~~~~~ts~k~~~Dn 387 (561)
T COG5354 319 NT---IFFSPHERYILFAGFDNLQGNIEIFDPAGR-FKVAGAFN-------GLNTSYCDWSPDGQFYDTDTTSEKLRVDN 387 (561)
T ss_pred cc---ccccCcccEEEEecCCccccceEEeccCCc-eEEEEEee-------cCCceEeeccCCceEEEecCCCcccccCc
Confidence 23 789999999999887765 5555432 33443444 22455678999999988764 578
Q ss_pred eEEEEECCceeeecCCCCCCceEEEEcCCCCEEEEEecCC
Q psy12614 522 HVVIWKNGQHHASLPRYRKPSTAMAIHPTLSTLVTVYSDH 561 (708)
Q Consensus 522 ~i~iw~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~dg 561 (708)
.|+||++..... ...+.+.|-|.+++..+.+.+.
T Consensus 388 ~i~l~~v~g~~~------fel~~~~W~p~~~~~ttsSs~~ 421 (561)
T COG5354 388 SIKLWDVYGAKV------FELTNITWDPSGQYVTTSSSCP 421 (561)
T ss_pred ceEEEEecCchh------hhhhhccccCCcccceeeccCC
Confidence 899999873322 1556788888887766666554
|
|
| >PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [] | Back alignment and domain information |
|---|
Probab=99.55 E-value=5.6e-09 Score=114.57 Aligned_cols=404 Identities=15% Similarity=0.134 Sum_probs=242.7
Q ss_pred cCCceEEEEEecCCCEEEEEeCCCcEEEE----EccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcC
Q psy12614 110 TSGTCWCLSVHKKKRLLAAGTEQGHINLF----QISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIH 184 (708)
Q Consensus 110 ~~~~v~~~~~s~~~~~la~~~~d~~i~iw----d~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~ 184 (708)
..+.|.++.+-++...++.+..+|.|.+. +....... ....-...|.+++||||+..|+..+.+ ++.+.+ +
T Consensus 74 ~~~~ivs~~yl~d~~~l~~~~~~Gdi~~~~~~~~~~~~~~E---~VG~vd~GI~a~~WSPD~Ella~vT~~~~l~~mt-~ 149 (928)
T PF04762_consen 74 PNDKIVSFQYLADSESLCIALASGDIILVREDPDPDEDEIE---IVGSVDSGILAASWSPDEELLALVTGEGNLLLMT-R 149 (928)
T ss_pred CCCcEEEEEeccCCCcEEEEECCceEEEEEccCCCCCceeE---EEEEEcCcEEEEEECCCcCEEEEEeCCCEEEEEe-c
Confidence 34789999999999999999999999999 66666554 233346789999999999999988877 766654 2
Q ss_pred CCceEEEEEecc-----------------------cCC------------------CCCceeEEEEEEccCCE-EEEEcC
Q psy12614 185 KGHAIHKMSLDK-----------------------SSK------------------FSKNTAVWCVAFCADFT-IITGDS 222 (708)
Q Consensus 185 ~~~~~~~~~~~~-----------------------~~~------------------~~~~~~v~~~~~~~~~~-l~~~~~ 222 (708)
+...+....... .++ ......-..++|-.||. +++.+.
T Consensus 150 ~fd~i~E~~l~~~~~~~~~~VsVGWGkKeTQF~Gs~gK~aa~~~~~p~~~~~d~~~~s~dd~~~~ISWRGDG~yFAVss~ 229 (928)
T PF04762_consen 150 DFDPISEVPLDSDDFGESKHVSVGWGKKETQFHGSAGKAAARQLRDPTVPKVDEGKLSWDDGRVRISWRGDGEYFAVSSV 229 (928)
T ss_pred cceEEEEeecCccccCCCceeeeccCcccCccCcchhhhhhhhccCCCCCccccCccccCCCceEEEECCCCcEEEEEEE
Confidence 222222211110 000 00122445788999997 443332
Q ss_pred ------CCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEec---CCeEEEEEccCCcccccCCCCCCCCcceE
Q psy12614 223 ------GGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGV---DPTVVCFQRTRKPQVCSTSGPEQGSSVWV 293 (708)
Q Consensus 223 ------dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~---dg~i~iw~~~~~~~~~~~~g~~~~~~~~~ 293 (708)
-..++||+- .|....+-..-.+--.+++|-|.|++||+... ...|.+|..+. +..|+
T Consensus 230 ~~~~~~~R~iRVy~R-eG~L~stSE~v~gLe~~l~WrPsG~lIA~~q~~~~~~~VvFfErNG-----Lrhge-------- 295 (928)
T PF04762_consen 230 EPETGSRRVIRVYSR-EGELQSTSEPVDGLEGALSWRPSGNLIASSQRLPDRHDVVFFERNG-----LRHGE-------- 295 (928)
T ss_pred EcCCCceeEEEEECC-CceEEeccccCCCccCCccCCCCCCEEEEEEEcCCCcEEEEEecCC-----cEeee--------
Confidence 257999995 47765554434444467899999999998765 35688888776 22232
Q ss_pred EeEEEeccccceEEEEEe--CCEEEEEcCCCeEEEEeCCCCc--eeecC--ccCCCCceEEEEcCCcE--EEEEcCCeEE
Q psy12614 294 RSVNRVIHEGDVKSLALH--GNRLYSGGLDSYLSLSYYPPKT--LVKYP--CTLAQSTPVSLAKDIQH--VLLQYTSHLE 365 (708)
Q Consensus 294 ~~~~~~~~~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~~~--~~~~~--~~~~~~~~~~~s~~~~~--l~~~~~~~i~ 365 (708)
....+......|..+.|+ +..|+..-.|. |.+|-..+.. +++.. ........+.|+|.... .+...++.+.
T Consensus 296 F~l~~~~~~~~v~~l~Wn~ds~iLAv~~~~~-vqLWt~~NYHWYLKqei~~~~~~~~~~~~Wdpe~p~~L~v~t~~g~~~ 374 (928)
T PF04762_consen 296 FTLRFDPEEEKVIELAWNSDSEILAVWLEDR-VQLWTRSNYHWYLKQEIRFSSSESVNFVKWDPEKPLRLHVLTSNGQYE 374 (928)
T ss_pred EecCCCCCCceeeEEEECCCCCEEEEEecCC-ceEEEeeCCEEEEEEEEEccCCCCCCceEECCCCCCEEEEEecCCcEE
Confidence 111122345679999999 77888766555 9999998876 22221 01122344788875432 2334446655
Q ss_pred EEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCC-CCcEEEEEcCCceEEEEEEecCCcc--eeEE
Q psy12614 366 LWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSN-DGKYVAYSTESCVRLHSLDLDGDKP--QISR 442 (708)
Q Consensus 366 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~-~g~~l~~~~d~~i~i~~~~~~~~~~--~~~~ 442 (708)
.++..-.. . .+-..+| |...+++-+..++.+-.+....-.+ ....
T Consensus 375 ~~~~~~~v-------------------------~-------~s~~~~~~D~g~vaVIDG~~lllTpf~~a~VPPPMs~~~ 422 (928)
T PF04762_consen 375 IYDFAWDV-------------------------S-------RSPGSSPNDNGTVAVIDGNKLLLTPFRRAVVPPPMSSYE 422 (928)
T ss_pred EEEEEEEE-------------------------E-------ecCCCCccCceEEEEEeCCeEEEecccccCCCchHhceE
Confidence 55443200 0 0001112 2233444555667776665421111 1111
Q ss_pred eecCCcccccceeEEEEEecCCCeEEEEecCCc--EEEecCCCeE------EEEEecC-------CCCCccCcceEEEEE
Q psy12614 443 IKNLPAPLFKSIFTHVLISADSTLLLAVSLNGP--LYIIDLSSLE------IKYCVDP-------YKSNLMSDVISLVQM 507 (708)
Q Consensus 443 ~~~~~~~~~~~~i~~~~~s~d~~~l~~~~~dg~--i~~~~~~~~~------~~~~~~~-------~~~~~~~~~i~~~~~ 507 (708)
+. + ...|.+++|++++..+++...||. +|.++..... ....+.. .... ...+..++|
T Consensus 423 l~-~-----~~~v~~vaf~~~~~~~avl~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 494 (928)
T PF04762_consen 423 LE-L-----PSPVNDVAFSPSNSRFAVLTSDGSLSIYEWDLKNMWSVKPPKLLSSISLDSMDISDSELP--LGSLRQLAW 494 (928)
T ss_pred Ec-C-----CCCcEEEEEeCCCCeEEEEECCCCEEEEEecCCCcccccCcchhhhcccccccccccccc--cccEEEEEE
Confidence 11 1 446788999999988999999997 7776544211 1111111 0111 446788999
Q ss_pred CCCCcEEEEEecC---CeEEEEECCce-----eeecCCCCCCceEEEEcCCCCEEEEEecCCcEEEEEcCCCC
Q psy12614 508 SECKQYIVCADRK---SHVVIWKNGQH-----HASLPRYRKPSTAMAIHPTLSTLVTVYSDHRIVEFDLNRKA 572 (708)
Q Consensus 508 s~~~~~l~~~~~d---~~i~iw~~~~~-----~~~~~~~~~~v~~l~~s~d~~~l~~~~~dg~i~vwd~~~~~ 572 (708)
..+...++....+ ..+.++++... ......-.+.+..+...++...++.-..+|.+...+.....
T Consensus 495 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~G~v~~~~~~~~~ 567 (928)
T PF04762_consen 495 LNDDTLLVLSDSDSNQSKIVLVDIDDSENSASVESSTEVDGVVLIISSSPDSGSLYIQTNDGKVFQLSSDGEL 567 (928)
T ss_pred eCCCEEEEEEecCcccceEEEEEeccCCCceeEEEEeccCceEEEEeeCCCCcEEEEEECCCEEEEeecCCCc
Confidence 8888877776654 67888888511 11333334556666666665557777889998876666543
|
|
| >PRK05137 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=3.7e-12 Score=130.80 Aligned_cols=209 Identities=9% Similarity=0.034 Sum_probs=148.6
Q ss_pred cEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcC---CCcEEEEECCCCeEeEEEeecCCceEEEEEecCC
Q psy12614 49 SIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGL---QGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKK 123 (708)
Q Consensus 49 ~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~---d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~ 123 (708)
.|.+||...... . .+..|. ..+.+.+|+ |+.|+..+. +..|.+||+.+++.. .+..+.+.+.+.+|+|||
T Consensus 183 ~l~~~d~dg~~~-~-~lt~~~--~~v~~p~wSpDG~~lay~s~~~g~~~i~~~dl~~g~~~-~l~~~~g~~~~~~~SPDG 257 (435)
T PRK05137 183 RLAIMDQDGANV-R-YLTDGS--SLVLTPRFSPNRQEITYMSYANGRPRVYLLDLETGQRE-LVGNFPGMTFAPRFSPDG 257 (435)
T ss_pred EEEEECCCCCCc-E-EEecCC--CCeEeeEECCCCCEEEEEEecCCCCEEEEEECCCCcEE-EeecCCCcccCcEECCCC
Confidence 788999865543 3 567777 899999999 888887653 468999999988653 445566778899999999
Q ss_pred CEEEE-EeCCCc--EEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecC---C-eEEEEEcCCCceEEEEEecc
Q psy12614 124 RLLAA-GTEQGH--INLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCA---A-AVRVWDIHKGHAIHKMSLDK 196 (708)
Q Consensus 124 ~~la~-~~~d~~--i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~---d-~i~iwd~~~~~~~~~~~~~~ 196 (708)
+.|+. .+.++. |++||+.+++. ..+..+.+......|+|||+.|+..+. . .|.++|+..++. ..+...
T Consensus 258 ~~la~~~~~~g~~~Iy~~d~~~~~~---~~Lt~~~~~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d~~g~~~-~~lt~~- 332 (435)
T PRK05137 258 RKVVMSLSQGGNTDIYTMDLRSGTT---TRLTDSPAIDTSPSYSPDGSQIVFESDRSGSPQLYVMNADGSNP-RRISFG- 332 (435)
T ss_pred CEEEEEEecCCCceEEEEECCCCce---EEccCCCCccCceeEcCCCCEEEEEECCCCCCeEEEEECCCCCe-EEeecC-
Confidence 98764 444544 78889888876 345666666778999999999987663 2 688999876554 344332
Q ss_pred cCCCCCceeEEEEEEccCCE-EEEEcCC---CcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEecC------C
Q psy12614 197 SSKFSKNTAVWCVAFCADFT-IITGDSG---GFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVD------P 266 (708)
Q Consensus 197 ~~~~~~~~~v~~~~~~~~~~-l~~~~~d---g~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d------g 266 (708)
...+....|+|||+ ++....+ ..|.+||+..+.. ..+. ....+..+.|+|||+.|+..+.+ .
T Consensus 333 ------~~~~~~~~~SpdG~~ia~~~~~~~~~~i~~~d~~~~~~-~~lt-~~~~~~~p~~spDG~~i~~~~~~~~~~~~~ 404 (435)
T PRK05137 333 ------GGRYSTPVWSPRGDLIAFTKQGGGQFSIGVMKPDGSGE-RILT-SGFLVEGPTWAPNGRVIMFFRQTPGSGGAP 404 (435)
T ss_pred ------CCcccCeEECCCCCEEEEEEcCCCceEEEEEECCCCce-Eecc-CCCCCCCCeECCCCCEEEEEEccCCCCCcc
Confidence 33456688999996 5544332 3688899865543 3333 23356788999999998876543 2
Q ss_pred eEEEEEccC
Q psy12614 267 TVVCFQRTR 275 (708)
Q Consensus 267 ~i~iw~~~~ 275 (708)
.+.++++..
T Consensus 405 ~L~~~dl~g 413 (435)
T PRK05137 405 KLYTVDLTG 413 (435)
T ss_pred eEEEEECCC
Confidence 577777765
|
|
| >KOG1409|consensus | Back alignment and domain information |
|---|
Probab=99.54 E-value=1e-12 Score=117.86 Aligned_cols=244 Identities=14% Similarity=0.175 Sum_probs=179.3
Q ss_pred EEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEE-CCCCeEeEEE-eecCCceEEEEEecCCCEEEEEeCCCcEEEEE
Q psy12614 64 VFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYD-MRRLNIKSST-AVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQ 139 (708)
Q Consensus 64 ~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd-~~~~~~~~~~-~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd 139 (708)
.++||. ..|++...- ..-+++.+.|.++++|- .+.++.-..+ .....+++++.+.++...|++|-..|++.-+.
T Consensus 19 ~~eG~~--d~vn~~~l~~~e~gv~~~s~drtvrv~lkrds~q~wpsI~~~mP~~~~~~~y~~e~~~L~vg~~ngtvtefs 96 (404)
T KOG1409|consen 19 KIEGSQ--DDVNAAILIPKEEGVISVSEDRTVRVWLKRDSGQYWPSIYHYMPSPCSAMEYVSESRRLYVGQDNGTVTEFA 96 (404)
T ss_pred hhcCch--hhhhhheeccCCCCeEEccccceeeeEEeccccccCchhhhhCCCCceEeeeeccceEEEEEEecceEEEEE
Confidence 677887 777766555 77899999999999995 3344422222 23457899999999999999999999999887
Q ss_pred ccC--CcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE
Q psy12614 140 ISD--EGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT 216 (708)
Q Consensus 140 ~~~--~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 216 (708)
+.. .+....+....|...+..+-|+...+.+++.+.| .+.---.+.+..+..+.... ...++.+.-. .
T Consensus 97 ~sedfnkm~~~r~~~~h~~~v~~~if~~~~e~V~s~~~dk~~~~hc~e~~~~lg~Y~~~~--------~~t~~~~d~~-~ 167 (404)
T KOG1409|consen 97 LSEDFNKMTFLKDYLAHQARVSAIVFSLTHEWVLSTGKDKQFAWHCTESGNRLGGYNFET--------PASALQFDAL-Y 167 (404)
T ss_pred hhhhhhhcchhhhhhhhhcceeeEEecCCceeEEEeccccceEEEeeccCCcccceEeec--------cCCCCceeeE-E
Confidence 753 2333336677899999999999999999999999 44433334444443332211 1111111101 2
Q ss_pred EEEEcCCCcEEEEeC--CCCeeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEE
Q psy12614 217 IITGDSGGFVRFWDG--KTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVR 294 (708)
Q Consensus 217 l~~~~~dg~i~~wd~--~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~ 294 (708)
...|...|.|....+ ..-..+.++.+|.+.+.+++|.|....|++|..|..+.+||+.. .+ -.
T Consensus 168 ~fvGd~~gqvt~lr~~~~~~~~i~~~~~h~~~~~~l~Wd~~~~~LfSg~~d~~vi~wdigg--------~~-------g~ 232 (404)
T KOG1409|consen 168 AFVGDHSGQITMLKLEQNGCQLITTFNGHTGEVTCLKWDPGQRLLFSGASDHSVIMWDIGG--------RK-------GT 232 (404)
T ss_pred EEecccccceEEEEEeecCCceEEEEcCcccceEEEEEcCCCcEEEeccccCceEEEeccC--------Cc-------ce
Confidence 345666676665544 34467888999999999999999999999999999999999976 22 14
Q ss_pred eEEEeccccceEEEEEe--CCEEEEEcCCCeEEEEeCCCCc
Q psy12614 295 SVNRVIHEGDVKSLALH--GNRLYSGGLDSYLSLSYYPPKT 333 (708)
Q Consensus 295 ~~~~~~~~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~~~ 333 (708)
...+.+|.+.|..+... -..+++++.||.|.+|+++...
T Consensus 233 ~~el~gh~~kV~~l~~~~~t~~l~S~~edg~i~~w~mn~~r 273 (404)
T KOG1409|consen 233 AYELQGHNDKVQALSYAQHTRQLISCGEDGGIVVWNMNVKR 273 (404)
T ss_pred eeeeccchhhhhhhhhhhhheeeeeccCCCeEEEEecccee
Confidence 67788999999999877 7899999999999999997654
|
|
| >COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.50 E-value=3.6e-10 Score=103.43 Aligned_cols=293 Identities=13% Similarity=0.144 Sum_probs=185.1
Q ss_pred CCcEEEEeCCCC--ee-EEEeeccccCeEEEEEeCCCCEEEEEecC---CeEEEEEccCCcccccCCCCCCCCcceEEeE
Q psy12614 223 GGFVRFWDGKTG--VQ-WSDVKTHKKDILALTVSEDENYLYCAGVD---PTVVCFQRTRKPQVCSTSGPEQGSSVWVRSV 296 (708)
Q Consensus 223 dg~i~~wd~~~~--~~-~~~~~~~~~~i~~~~~s~~~~~l~~~~~d---g~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~ 296 (708)
+..|++|++.+. +. ...+-...+.++-|+++|+++.|+++..+ |.|.-|.++... |. ...+.
T Consensus 15 s~gI~v~~ld~~~g~l~~~~~v~~~~nptyl~~~~~~~~LY~v~~~~~~ggvaay~iD~~~------G~------Lt~ln 82 (346)
T COG2706 15 SQGIYVFNLDTKTGELSLLQLVAELGNPTYLAVNPDQRHLYVVNEPGEEGGVAAYRIDPDD------GR------LTFLN 82 (346)
T ss_pred CCceEEEEEeCcccccchhhhccccCCCceEEECCCCCEEEEEEecCCcCcEEEEEEcCCC------Ce------EEEee
Confidence 567999988742 22 11223466788999999999999988655 677777776400 21 11111
Q ss_pred EEeccccceEEEEEe--CCEEEEEc-CCCeEEEEeCCC-Cceee------cCcc-------CCCCceEEEEcCCcEEEEE
Q psy12614 297 NRVIHEGDVKSLALH--GNRLYSGG-LDSYLSLSYYPP-KTLVK------YPCT-------LAQSTPVSLAKDIQHVLLQ 359 (708)
Q Consensus 297 ~~~~~~~~v~~l~~~--~~~l~s~~-~d~~i~iw~~~~-~~~~~------~~~~-------~~~~~~~~~s~~~~~l~~~ 359 (708)
.......+-..++++ +++++++. ..|.|.++.+.. +.+.. ..+. .++.....+.|+++++++.
T Consensus 83 ~~~~~g~~p~yvsvd~~g~~vf~AnY~~g~v~v~p~~~dG~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~ 162 (346)
T COG2706 83 RQTLPGSPPCYVSVDEDGRFVFVANYHSGSVSVYPLQADGSLQPVVQVVKHTGSGPHERQESPHVHSANFTPDGRYLVVP 162 (346)
T ss_pred ccccCCCCCeEEEECCCCCEEEEEEccCceEEEEEcccCCccccceeeeecCCCCCCccccCCccceeeeCCCCCEEEEe
Confidence 122222333677777 76777665 467899998865 32111 1111 1224568899999999985
Q ss_pred --cCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEE-Ec-CCceEEEEEEecC
Q psy12614 360 --YTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAY-ST-ESCVRLHSLDLDG 435 (708)
Q Consensus 360 --~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~-~~-d~~i~i~~~~~~~ 435 (708)
....|.+|++..+.. .+.....+ ........++|+|++++..+ .. +++|.+|..+...
T Consensus 163 DLG~Dri~~y~~~dg~L----------------~~~~~~~v--~~G~GPRHi~FHpn~k~aY~v~EL~stV~v~~y~~~~ 224 (346)
T COG2706 163 DLGTDRIFLYDLDDGKL----------------TPADPAEV--KPGAGPRHIVFHPNGKYAYLVNELNSTVDVLEYNPAV 224 (346)
T ss_pred ecCCceEEEEEcccCcc----------------cccccccc--CCCCCcceEEEcCCCcEEEEEeccCCEEEEEEEcCCC
Confidence 566799999987651 01111112 34456688999999998887 55 9999999998742
Q ss_pred C-cceeEEeecCCcccc-cceeEEEEEecCCCeEEEEecCCc---EEEecCCCeEEEEEecCCCCCccCcceEEEEECCC
Q psy12614 436 D-KPQISRIKNLPAPLF-KSIFTHVLISADSTLLLAVSLNGP---LYIIDLSSLEIKYCVDPYKSNLMSDVISLVQMSEC 510 (708)
Q Consensus 436 ~-~~~~~~~~~~~~~~~-~~~i~~~~~s~d~~~l~~~~~dg~---i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~ 510 (708)
+ .-.++.+..+|.... ......+.+++||++|.+....-. ++.++..+.+ +..+.....+ ...-....|++.
T Consensus 225 g~~~~lQ~i~tlP~dF~g~~~~aaIhis~dGrFLYasNRg~dsI~~f~V~~~~g~-L~~~~~~~te--g~~PR~F~i~~~ 301 (346)
T COG2706 225 GKFEELQTIDTLPEDFTGTNWAAAIHISPDGRFLYASNRGHDSIAVFSVDPDGGK-LELVGITPTE--GQFPRDFNINPS 301 (346)
T ss_pred ceEEEeeeeccCccccCCCCceeEEEECCCCCEEEEecCCCCeEEEEEEcCCCCE-EEEEEEeccC--CcCCccceeCCC
Confidence 2 224555666676655 556667999999999996644333 5666554433 3233222222 334678999999
Q ss_pred CcEEEEEecC-CeEEEEECC--ceeeecC---CCCCCceEEEEc
Q psy12614 511 KQYIVCADRK-SHVVIWKNG--QHHASLP---RYRKPSTAMAIH 548 (708)
Q Consensus 511 ~~~l~~~~~d-~~i~iw~~~--~~~~~~~---~~~~~v~~l~~s 548 (708)
|++|+++.++ ..|.+|..+ ++...+. .....+.|+.|.
T Consensus 302 g~~Liaa~q~sd~i~vf~~d~~TG~L~~~~~~~~~p~Pvcv~f~ 345 (346)
T COG2706 302 GRFLIAANQKSDNITVFERDKETGRLTLLGRYAVVPEPVCVKFL 345 (346)
T ss_pred CCEEEEEccCCCcEEEEEEcCCCceEEecccccCCCCcEEEEEc
Confidence 9999998854 579999888 3333222 233456666664
|
|
| >PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins | Back alignment and domain information |
|---|
Probab=99.50 E-value=3.4e-12 Score=113.65 Aligned_cols=150 Identities=13% Similarity=0.126 Sum_probs=106.3
Q ss_pred EEEEeCCCCcEEEE--E-c--------CCceEEEEEEecCCcceeEEeecCCcccccceeEEEEEecCCCeEEEEec--C
Q psy12614 407 RCSVVSNDGKYVAY--S-T--------ESCVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVLISADSTLLLAVSL--N 473 (708)
Q Consensus 407 ~~~~~s~~g~~l~~--~-~--------d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~~~~~--d 473 (708)
..+.|+|+|.+|++ . . -+...+|.++..+.. ...+. +.. ...|.+++|+|+|+.+|+... +
T Consensus 9 ~~~~W~~~G~~l~~~~~~~~~~~~ks~~~~~~l~~~~~~~~~--~~~i~-l~~---~~~I~~~~WsP~g~~favi~g~~~ 82 (194)
T PF08662_consen 9 AKLHWQPSGDYLLVKVQTRVDKSGKSYYGEFELFYLNEKNIP--VESIE-LKK---EGPIHDVAWSPNGNEFAVIYGSMP 82 (194)
T ss_pred EEEEecccCCEEEEEEEEeeccCcceEEeeEEEEEEecCCCc--cceee-ccC---CCceEEEEECcCCCEEEEEEccCC
Confidence 45789999999986 2 1 234667777653322 22211 222 225888999999999877643 3
Q ss_pred Cc--EEEecCCCeEEEEEecCCCCCccCcceEEEEECCCCcEEEEEec---CCeEEEEECCceeeecCCCCCCceEEEEc
Q psy12614 474 GP--LYIIDLSSLEIKYCVDPYKSNLMSDVISLVQMSECKQYIVCADR---KSHVVIWKNGQHHASLPRYRKPSTAMAIH 548 (708)
Q Consensus 474 g~--i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~---d~~i~iw~~~~~~~~~~~~~~~v~~l~~s 548 (708)
.. +|+++ ++.+..+. ...++.+.|||+|++|++++. .|.|.+||..+...........++.++|+
T Consensus 83 ~~v~lyd~~---~~~i~~~~-------~~~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~~~~~i~~~~~~~~t~~~Ws 152 (194)
T PF08662_consen 83 AKVTLYDVK---GKKIFSFG-------TQPRNTISWSPDGRFLVLAGFGNLNGDLEFWDVRKKKKISTFEHSDATDVEWS 152 (194)
T ss_pred cccEEEcCc---ccEeEeec-------CCCceEEEECCCCCEEEEEEccCCCcEEEEEECCCCEEeeccccCcEEEEEEc
Confidence 33 88886 35556654 446788999999999999874 46799999996655433344467999999
Q ss_pred CCCCEEEEEec------CCcEEEEEcCCCC
Q psy12614 549 PTLSTLVTVYS------DHRIVEFDLNRKA 572 (708)
Q Consensus 549 ~d~~~l~~~~~------dg~i~vwd~~~~~ 572 (708)
|||++|++++. |+.++||++....
T Consensus 153 PdGr~~~ta~t~~r~~~dng~~Iw~~~G~~ 182 (194)
T PF08662_consen 153 PDGRYLATATTSPRLRVDNGFKIWSFQGRL 182 (194)
T ss_pred CCCCEEEEEEeccceeccccEEEEEecCeE
Confidence 99999999864 7889999997554
|
|
| >PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins | Back alignment and domain information |
|---|
Probab=99.50 E-value=2.6e-12 Score=114.43 Aligned_cols=149 Identities=19% Similarity=0.316 Sum_probs=106.8
Q ss_pred EEEEEecCCCEEEEEeC----------CCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEec--CC-eEEEE
Q psy12614 115 WCLSVHKKKRLLAAGTE----------QGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGC--AA-AVRVW 181 (708)
Q Consensus 115 ~~~~~s~~~~~la~~~~----------d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~--~d-~i~iw 181 (708)
..+.|+|+|++|++-.. -+...+|.++..............++|.+++|+|+|+.+|+.. .+ .|.+|
T Consensus 9 ~~~~W~~~G~~l~~~~~~~~~~~~ks~~~~~~l~~~~~~~~~~~~i~l~~~~~I~~~~WsP~g~~favi~g~~~~~v~ly 88 (194)
T PF08662_consen 9 AKLHWQPSGDYLLVKVQTRVDKSGKSYYGEFELFYLNEKNIPVESIELKKEGPIHDVAWSPNGNEFAVIYGSMPAKVTLY 88 (194)
T ss_pred EEEEecccCCEEEEEEEEeeccCcceEEeeEEEEEEecCCCccceeeccCCCceEEEEECcCCCEEEEEEccCCcccEEE
Confidence 35789999988775433 1335566553322211122222345799999999999876553 45 89999
Q ss_pred EcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcC---CCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCC
Q psy12614 182 DIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDS---GGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDEN 257 (708)
Q Consensus 182 d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~---dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~ 257 (708)
|++ ++.+..+. ...+..+.|+|+|+ +++++. .|.|.+||.++.+.+.... | ..+..++|+|||+
T Consensus 89 d~~-~~~i~~~~---------~~~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~~~~~i~~~~-~-~~~t~~~WsPdGr 156 (194)
T PF08662_consen 89 DVK-GKKIFSFG---------TQPRNTISWSPDGRFLVLAGFGNLNGDLEFWDVRKKKKISTFE-H-SDATDVEWSPDGR 156 (194)
T ss_pred cCc-ccEeEeec---------CCCceEEEECCCCCEEEEEEccCCCcEEEEEECCCCEEeeccc-c-CcEEEEEEcCCCC
Confidence 996 66666553 45677899999996 555543 5789999999888887775 3 3578999999999
Q ss_pred EEEEEec------CCeEEEEEccC
Q psy12614 258 YLYCAGV------DPTVVCFQRTR 275 (708)
Q Consensus 258 ~l~~~~~------dg~i~iw~~~~ 275 (708)
+|+++.. |+.++||+...
T Consensus 157 ~~~ta~t~~r~~~dng~~Iw~~~G 180 (194)
T PF08662_consen 157 YLATATTSPRLRVDNGFKIWSFQG 180 (194)
T ss_pred EEEEEEeccceeccccEEEEEecC
Confidence 9998874 68899999865
|
|
| >TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain | Back alignment and domain information |
|---|
Probab=99.49 E-value=1.3e-09 Score=104.37 Aligned_cols=106 Identities=15% Similarity=0.112 Sum_probs=78.0
Q ss_pred CcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecC---------C--eEEEEEcCCCceEEEEEecccCCCC
Q psy12614 133 GHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCA---------A--AVRVWDIHKGHAIHKMSLDKSSKFS 201 (708)
Q Consensus 133 ~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~---------d--~i~iwd~~~~~~~~~~~~~~~~~~~ 201 (708)
++|.+.|..+++.+ ..+..-..+ ..+ +|||++.|+++.. + .|.+||..+++.+.++..+...++.
T Consensus 27 ~~v~ViD~~~~~v~--g~i~~G~~P-~~~-~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~~~~~i~~p~~p~~~ 102 (352)
T TIGR02658 27 TQVYTIDGEAGRVL--GMTDGGFLP-NPV-VASDGSFFAHASTVYSRIARGKRTDYVEVIDPQTHLPIADIELPEGPRFL 102 (352)
T ss_pred ceEEEEECCCCEEE--EEEEccCCC-cee-ECCCCCEEEEEeccccccccCCCCCEEEEEECccCcEEeEEccCCCchhh
Confidence 78999999998886 344322222 224 9999999988777 3 9999999999999999876321111
Q ss_pred CceeEEEEEEccCCE-EEEEc-C-CCcEEEEeCCCCeeEEEeec
Q psy12614 202 KNTAVWCVAFCADFT-IITGD-S-GGFVRFWDGKTGVQWSDVKT 242 (708)
Q Consensus 202 ~~~~v~~~~~~~~~~-l~~~~-~-dg~i~~wd~~~~~~~~~~~~ 242 (708)
.......++++|||+ +++.. . +..|.+.|+.+++.+..+.-
T Consensus 103 ~~~~~~~~~ls~dgk~l~V~n~~p~~~V~VvD~~~~kvv~ei~v 146 (352)
T TIGR02658 103 VGTYPWMTSLTPDNKTLLFYQFSPSPAVGVVDLEGKAFVRMMDV 146 (352)
T ss_pred ccCccceEEECCCCCEEEEecCCCCCEEEEEECCCCcEEEEEeC
Confidence 123345789999996 44444 3 78999999999999888764
|
This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome. |
| >KOG3881|consensus | Back alignment and domain information |
|---|
Probab=99.48 E-value=7.9e-12 Score=114.40 Aligned_cols=244 Identities=15% Similarity=0.196 Sum_probs=178.2
Q ss_pred CcEEEEEEe----CCEEEEEcCCCcEEEEECCCCeEeEEE------eecCCceEEEEEecCCCEEEEEeCCCcEEEEEcc
Q psy12614 72 NSIECLTWF----NDRLFSGGLQGFVNEYDMRRLNIKSST------AVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQIS 141 (708)
Q Consensus 72 ~~v~~l~~~----~~~l~s~~~d~~i~vwd~~~~~~~~~~------~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~ 141 (708)
..|.+++|. ...+...+.+-.+....++...+...+ ....+.|..++... ..|++|-.+|.+.+|..+
T Consensus 56 ~ris~l~~~~d~~tevl~~r~~~~~~~~~~~~E~~~~s~~~~~~~~~l~~~~I~gl~~~d--g~Litc~~sG~l~~~~~k 133 (412)
T KOG3881|consen 56 DRISSLLFGVDGETEVLNARSADDDLPKFVIEEFEISSSLDDAKTVSLGTKSIKGLKLAD--GTLITCVSSGNLQVRHDK 133 (412)
T ss_pred hhhhhheeecCCceeEeeccccCcccccccccCCccccccccccccccccccccchhhcC--CEEEEEecCCcEEEEecc
Confidence 578888888 345555557777777777766544433 23445666666543 367788899999999998
Q ss_pred CCcEE--EEEecccccccEEEEEECCCCCEEEE-ecCC---eEEEEEcCCCceEEEEEecccCCC--CCceeEEEEEEcc
Q psy12614 142 DEGLL--YEKLLDRQQGRILCTAWHSSGDYLVT-GCAA---AVRVWDIHKGHAIHKMSLDKSSKF--SKNTAVWCVAFCA 213 (708)
Q Consensus 142 ~~~~~--~~~~~~~~~~~v~~~~~s~d~~~l~~-~~~d---~i~iwd~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~ 213 (708)
.+... ....+.. ...+..+.-++...++++ |+.. .+.+||++..+++..-+...+... ...-+++++.|.+
T Consensus 134 ~~d~hss~l~~la~-g~g~~~~r~~~~~p~Iva~GGke~~n~lkiwdle~~~qiw~aKNvpnD~L~LrVPvW~tdi~Fl~ 212 (412)
T KOG3881|consen 134 SGDLHSSKLIKLAT-GPGLYDVRQTDTDPYIVATGGKENINELKIWDLEQSKQIWSAKNVPNDRLGLRVPVWITDIRFLE 212 (412)
T ss_pred CCccccccceeeec-CCceeeeccCCCCCceEecCchhcccceeeeecccceeeeeccCCCCccccceeeeeeccceecC
Confidence 54421 0012222 245667777776666655 6654 699999998877666554332211 1244566788887
Q ss_pred C--C-EEEEEcCCCcEEEEeCCCC-eeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCC
Q psy12614 214 D--F-TIITGDSGGFVRFWDGKTG-VQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGS 289 (708)
Q Consensus 214 ~--~-~l~~~~~dg~i~~wd~~~~-~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~ 289 (708)
. . +|++++.-+++++||.+.+ +++..+.....+++++...|+++.+++|..-|.+..||++. +.
T Consensus 213 g~~~~~fat~T~~hqvR~YDt~~qRRPV~~fd~~E~~is~~~l~p~gn~Iy~gn~~g~l~~FD~r~--------~k---- 280 (412)
T KOG3881|consen 213 GSPNYKFATITRYHQVRLYDTRHQRRPVAQFDFLENPISSTGLTPSGNFIYTGNTKGQLAKFDLRG--------GK---- 280 (412)
T ss_pred CCCCceEEEEecceeEEEecCcccCcceeEeccccCcceeeeecCCCcEEEEecccchhheecccC--------ce----
Confidence 6 4 5999999999999999876 45778887889999999999999999999999999999998 54
Q ss_pred cceEEeEEEeccccceEEEEEe--CCEEEEEcCCCeEEEEeCCCCc
Q psy12614 290 SVWVRSVNRVIHEGDVKSLALH--GNRLYSGGLDSYLSLSYYPPKT 333 (708)
Q Consensus 290 ~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~~~ 333 (708)
.....+.+..+.|+++..+ ..+++++|-|..+||+|+.+..
T Consensus 281 ---l~g~~~kg~tGsirsih~hp~~~~las~GLDRyvRIhD~ktrk 323 (412)
T KOG3881|consen 281 ---LLGCGLKGITGSIRSIHCHPTHPVLASCGLDRYVRIHDIKTRK 323 (412)
T ss_pred ---eeccccCCccCCcceEEEcCCCceEEeeccceeEEEeecccch
Confidence 2233477888999999999 5799999999999999999854
|
|
| >KOG1354|consensus | Back alignment and domain information |
|---|
Probab=99.46 E-value=3.1e-11 Score=108.51 Aligned_cols=292 Identities=15% Similarity=0.108 Sum_probs=178.9
Q ss_pred cccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccc------------cceEEEEE
Q psy12614 243 HKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHE------------GDVKSLAL 310 (708)
Q Consensus 243 ~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~------------~~v~~l~~ 310 (708)
...-|.++.|...|.+|++|+.+|.+.+|.... ... ..+.....++.|. ..|..+.|
T Consensus 24 eadiis~vef~~~Ge~LatGdkgGRVv~f~r~~--------~~~---~ey~~~t~fqshepEFDYLkSleieEKinkIrw 92 (433)
T KOG1354|consen 24 EADIISAVEFDHYGERLATGDKGGRVVLFEREK--------LYK---GEYNFQTEFQSHEPEFDYLKSLEIEEKINKIRW 92 (433)
T ss_pred hhcceeeEEeecccceEeecCCCCeEEEeeccc--------ccc---cceeeeeeeeccCcccchhhhhhhhhhhhhcee
Confidence 346788999999999999999999999998765 110 0122233344443 34667777
Q ss_pred e----CCEEEEEcCCCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEEEcCCeEEEEEecCCCCCCCCCCCCCCcc
Q psy12614 311 H----GNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTTGV 386 (708)
Q Consensus 311 ~----~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~ 386 (708)
. ...++..+.|.+|++|.+..+....-....+... .| +.-..+++--+.... ..
T Consensus 93 ~~~~n~a~FLlstNdktiKlWKi~er~~k~~~~~~~~~~----~~-------~~~~~lr~p~~~~~~---------~~-- 150 (433)
T KOG1354|consen 93 LDDGNLAEFLLSTNDKTIKLWKIRERGSKKEGYNLPEEG----PP-------GTITSLRLPVEGRHD---------LE-- 150 (433)
T ss_pred cCCCCccEEEEecCCcceeeeeeeccccccccccccccC----CC-------Cccceeeceeecccc---------ce--
Confidence 7 5677888899999999987765333110000000 00 000001111000000 00
Q ss_pred cCCCCceEEEEEEecCCCceEEEEeCCCCcEEEEEcCCceEEEEEEecCCcceeEEeecCCcccc--cceeEEEEEecCC
Q psy12614 387 PLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYSTESCVRLHSLDLDGDKPQISRIKNLPAPLF--KSIFTHVLISADS 464 (708)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~--~~~i~~~~~s~d~ 464 (708)
. ...........|...|.++.++.|+..+.+++|=.|-+|.++-..+...+..+ -|.... ..-|++..|+|..
T Consensus 151 -v--ea~prRv~aNaHtyhiNSIS~NsD~Et~lSADdLRINLWnlei~d~sFnIVDI--KP~nmEeLteVITsaEFhp~~ 225 (433)
T KOG1354|consen 151 -V--EASPRRVYANAHTYHINSISVNSDKETFLSADDLRINLWNLEIIDQSFNIVDI--KPANMEELTEVITSAEFHPHH 225 (433)
T ss_pred -e--eeeeeeeccccceeEeeeeeecCccceEeeccceeeeeccccccCCceeEEEc--cccCHHHHHHHHhhhccCHhH
Confidence 0 00011122337888999999999999999999999999999875544444332 232222 4457788999964
Q ss_pred -CeEEEEecCCc--EEEecCCC-e-EEEEEecCCCCC-------ccCcceEEEEECCCCcEEEEEecCCeEEEEECC---
Q psy12614 465 -TLLLAVSLNGP--LYIIDLSS-L-EIKYCVDPYKSN-------LMSDVISLVQMSECKQYIVCADRKSHVVIWKNG--- 529 (708)
Q Consensus 465 -~~l~~~~~dg~--i~~~~~~~-~-~~~~~~~~~~~~-------~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~--- 529 (708)
..++..++.|. +-++.... | ...+.+..+... .....|..+.|+++|+|+++-+ --+|++||+.
T Consensus 226 cn~f~YSSSKGtIrLcDmR~~aLCd~hsKlfEepedp~~rsffseiIsSISDvKFs~sGryilsRD-yltvk~wD~nme~ 304 (433)
T KOG1354|consen 226 CNVFVYSSSKGTIRLCDMRQSALCDAHSKLFEEPEDPSSRSFFSEIISSISDVKFSHSGRYILSRD-YLTVKLWDLNMEA 304 (433)
T ss_pred ccEEEEecCCCcEEEeechhhhhhcchhhhhccccCCcchhhHHHHhhhhhceEEccCCcEEEEec-cceeEEEeccccC
Confidence 56666777777 55554221 0 011112111100 0035788999999999999874 4699999996
Q ss_pred ceeeecCCCC------------C---CceEEEEcCCCCEEEEEecCCcEEEEEcCCCCC
Q psy12614 530 QHHASLPRYR------------K---PSTAMAIHPTLSTLVTVYSDHRIVEFDLNRKAF 573 (708)
Q Consensus 530 ~~~~~~~~~~------------~---~v~~l~~s~d~~~l~~~~~dg~i~vwd~~~~~~ 573 (708)
++..+.+-|. . .-..++|+-++.++++|+..+.+++|++..|..
T Consensus 305 ~pv~t~~vh~~lr~kLc~lYEnD~IfdKFec~~sg~~~~v~TGsy~n~frvf~~~~gsk 363 (433)
T KOG1354|consen 305 KPVETYPVHEYLRSKLCSLYENDAIFDKFECSWSGNDSYVMTGSYNNVFRVFNLARGSK 363 (433)
T ss_pred CcceEEeehHhHHHHHHHHhhccchhheeEEEEcCCcceEecccccceEEEecCCCCcc
Confidence 3433444443 1 224588998999999999999999999766543
|
|
| >KOG2314|consensus | Back alignment and domain information |
|---|
Probab=99.45 E-value=1.5e-10 Score=110.92 Aligned_cols=324 Identities=12% Similarity=0.099 Sum_probs=206.5
Q ss_pred eeEEEEEEccCCEEEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCC
Q psy12614 204 TAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTS 283 (708)
Q Consensus 204 ~~v~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~ 283 (708)
-.-+-+.|||-|+.++.-...-|.+|--.+...++.+. | ..|.-+.|||..+||++-+..-.+.-|+-.
T Consensus 211 WTetyv~wSP~GTYL~t~Hk~GI~lWGG~~f~r~~RF~-H-p~Vq~idfSP~EkYLVT~s~~p~~~~~~d~--------- 279 (698)
T KOG2314|consen 211 WTETYVRWSPKGTYLVTFHKQGIALWGGESFDRIQRFY-H-PGVQFIDFSPNEKYLVTYSPEPIIVEEDDN--------- 279 (698)
T ss_pred ceeeeEEecCCceEEEEEeccceeeecCccHHHHHhcc-C-CCceeeecCCccceEEEecCCccccCcccC---------
Confidence 34467899999986666666669999877777777775 4 467889999999999987654322222211
Q ss_pred CCCCCCcceEEeEEEeccccceEEEEEeCCEEEEEcCCCeEEEEeCCCCceeecC----ccCCCCceEEEEcCCcEEEEE
Q psy12614 284 GPEQGSSVWVRSVNRVIHEGDVKSLALHGNRLYSGGLDSYLSLSYYPPKTLVKYP----CTLAQSTPVSLAKDIQHVLLQ 359 (708)
Q Consensus 284 g~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~----~~~~~~~~~~~s~~~~~l~~~ 359 (708)
....++|||+.++.+.+-. .+...-+.+.+|.|++++|.-
T Consensus 280 ------------------------------------e~~~l~IWDI~tG~lkrsF~~~~~~~~~WP~frWS~DdKy~Arm 323 (698)
T KOG2314|consen 280 ------------------------------------EGQQLIIWDIATGLLKRSFPVIKSPYLKWPIFRWSHDDKYFARM 323 (698)
T ss_pred ------------------------------------CCceEEEEEccccchhcceeccCCCccccceEEeccCCceeEEe
Confidence 1235666666666533322 123334568899999999998
Q ss_pred cCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEE-E--c---CCceEEEEEEe
Q psy12614 360 YTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAY-S--T---ESCVRLHSLDL 433 (708)
Q Consensus 360 ~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~-~--~---d~~i~i~~~~~ 433 (708)
..++|.||+...- .++....-.-..|....|+|.+..||. . . -..+.+..+..
T Consensus 324 ~~~sisIyEtpsf---------------------~lld~Kslki~gIr~FswsP~~~llAYwtpe~~~~parvtL~evPs 382 (698)
T KOG2314|consen 324 TGNSISIYETPSF---------------------MLLDKKSLKISGIRDFSWSPTSNLLAYWTPETNNIPARVTLMEVPS 382 (698)
T ss_pred ccceEEEEecCce---------------------eeecccccCCccccCcccCCCcceEEEEcccccCCcceEEEEecCc
Confidence 8899999997762 233333334567888899999999997 2 1 23455666554
Q ss_pred cCCcceeEEeecCCcccccceeEEEEEecCCCeEEEEec-------CCc-----EEEecCCCeEEEEEecCCCCCccCcc
Q psy12614 434 DGDKPQISRIKNLPAPLFKSIFTHVLISADSTLLLAVSL-------NGP-----LYIIDLSSLEIKYCVDPYKSNLMSDV 501 (708)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~~~~~-------dg~-----i~~~~~~~~~~~~~~~~~~~~~~~~~ 501 (708)
.. .++... +-.-. ... +-|-.+|.+|++--. .|. |+.+...+. .+..+.- ...
T Consensus 383 ~~---~iRt~n-lfnVs-Dck---LhWQk~gdyLcvkvdR~tK~~~~g~f~n~eIfrireKdI-pve~vel------ke~ 447 (698)
T KOG2314|consen 383 KR---EIRTKN-LFNVS-DCK---LHWQKSGDYLCVKVDRHTKSKVKGQFSNLEIFRIREKDI-PVEVVEL------KES 447 (698)
T ss_pred cc---eeeecc-ceeee-ccE---EEeccCCcEEEEEEEeeccccccceEeeEEEEEeeccCC-Cceeeec------chh
Confidence 21 222111 11100 112 677788888886432 122 444443321 1111111 567
Q ss_pred eEEEEECCCCcEEEEEec---CCeEEEEECCc-e-----eeecCCCCCCceEEEEcCCCCEEEEE---ecCCcEEEEEcC
Q psy12614 502 ISLVQMSECKQYIVCADR---KSHVVIWKNGQ-H-----HASLPRYRKPSTAMAIHPTLSTLVTV---YSDHRIVEFDLN 569 (708)
Q Consensus 502 i~~~~~s~~~~~l~~~~~---d~~i~iw~~~~-~-----~~~~~~~~~~v~~l~~s~d~~~l~~~---~~dg~i~vwd~~ 569 (708)
|...+|-|.|..+++-+. ..++.+|.++. . ...+.. ...+.+.|+|.|++++.+ +..|.+..+|..
T Consensus 448 vi~FaWEP~gdkF~vi~g~~~k~tvsfY~~e~~~~~~~lVk~~dk--~~~N~vfwsPkG~fvvva~l~s~~g~l~F~D~~ 525 (698)
T KOG2314|consen 448 VIAFAWEPHGDKFAVISGNTVKNTVSFYAVETNIKKPSLVKELDK--KFANTVFWSPKGRFVVVAALVSRRGDLEFYDTD 525 (698)
T ss_pred eeeeeeccCCCeEEEEEccccccceeEEEeecCCCchhhhhhhcc--cccceEEEcCCCcEEEEEEecccccceEEEecc
Confidence 889999999998887653 35889998882 1 123332 456789999999998877 457889999998
Q ss_pred CCCCCchhhhhhccCchhhhcCCCCeeEEEeCCCCCceEEEEc------CeeEEEEecCC
Q psy12614 570 RKAFTTFSRKLETNHPNEWLSRQLPVLGIEFDPQDSSLIYLMD------DSALCVINKNK 623 (708)
Q Consensus 570 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~~~~l~~~~~------d~~i~~wd~~~ 623 (708)
...+.. .....| ...+.+.|.|.|+|+++++. |..-++|++.-
T Consensus 526 ~a~~k~----------~~~~eh-~~at~veWDPtGRYvvT~ss~wrhk~d~GYri~tfqG 574 (698)
T KOG2314|consen 526 YADLKD----------TASPEH-FAATEVEWDPTGRYVVTSSSSWRHKVDNGYRIFTFQG 574 (698)
T ss_pred hhhhhh----------ccCccc-cccccceECCCCCEEEEeeehhhhccccceEEEEeec
Confidence 533220 011123 24567899999999998876 55567887753
|
|
| >KOG2321|consensus | Back alignment and domain information |
|---|
Probab=99.45 E-value=3.9e-11 Score=115.26 Aligned_cols=284 Identities=13% Similarity=0.124 Sum_probs=188.7
Q ss_pred cccccEEEEEECCCCCEEEE-ecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEE-EccCC-EEEEEcCCCcEEE
Q psy12614 153 RQQGRILCTAWHSSGDYLVT-GCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVA-FCADF-TIITGDSGGFVRF 228 (708)
Q Consensus 153 ~~~~~v~~~~~s~d~~~l~~-~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~-~l~~~~~dg~i~~ 228 (708)
.+...-+.|..+|||+|+++ |... .|++||+.+......--. ...+..+. .+.|- +.+.-..|.+|-+
T Consensus 49 e~p~ast~ik~s~DGqY~lAtG~YKP~ikvydlanLSLKFERhl--------Dae~V~feiLsDD~SK~v~L~~DR~Ief 120 (703)
T KOG2321|consen 49 EMPTASTRIKVSPDGQYLLATGTYKPQIKVYDLANLSLKFERHL--------DAEVVDFEILSDDYSKSVFLQNDRTIEF 120 (703)
T ss_pred CCccccceeEecCCCcEEEEecccCCceEEEEcccceeeeeecc--------cccceeEEEeccchhhheEeecCceeee
Confidence 35667789999999999865 4556 999999987665444322 33333333 33333 3666666777766
Q ss_pred EeCCCCeeEE-EeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEE
Q psy12614 229 WDGKTGVQWS-DVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKS 307 (708)
Q Consensus 229 wd~~~~~~~~-~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~ 307 (708)
..- .|.... .++ ..-..++++.-..-|++++....|+-+++.. |. .+..+....+.+++
T Consensus 121 Hak-~G~hy~~RIP---~~GRDm~y~~~scDly~~gsg~evYRlNLEq--------Gr--------fL~P~~~~~~~lN~ 180 (703)
T KOG2321|consen 121 HAK-YGRHYRTRIP---KFGRDMKYHKPSCDLYLVGSGSEVYRLNLEQ--------GR--------FLNPFETDSGELNV 180 (703)
T ss_pred hhh-cCeeeeeecC---cCCccccccCCCccEEEeecCcceEEEEccc--------cc--------ccccccccccccee
Confidence 542 232221 122 2224566665555566676677899999998 76 55666666788999
Q ss_pred EEEe--CCEEEEEcCCCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEEEcCCeEEEEEecCCCCCCCCCCCCCCc
Q psy12614 308 LALH--GNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTTG 385 (708)
Q Consensus 308 l~~~--~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~~~~ 385 (708)
+..+ ..+|++|+.+|.|-.||.+........ +....- ..
T Consensus 181 v~in~~hgLla~Gt~~g~VEfwDpR~ksrv~~l-----------------------------~~~~~v----~s------ 221 (703)
T KOG2321|consen 181 VSINEEHGLLACGTEDGVVEFWDPRDKSRVGTL-----------------------------DAASSV----NS------ 221 (703)
T ss_pred eeecCccceEEecccCceEEEecchhhhhheee-----------------------------eccccc----CC------
Confidence 9888 788889999999999998776422111 111100 00
Q ss_pred ccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEEEc-CCceEEEEEEecCCcceeEEeecCCcccccceeEEEEEecCC
Q psy12614 386 VPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYST-ESCVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVLISADS 464 (708)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~-d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~ 464 (708)
.........|+++.|+.+|-.+++|+ .|.+.|||+.... ..+ ...|....+|..+.|-+.+
T Consensus 222 -----------~pg~~~~~svTal~F~d~gL~~aVGts~G~v~iyDLRa~~--pl~-----~kdh~~e~pi~~l~~~~~~ 283 (703)
T KOG2321|consen 222 -----------HPGGDAAPSVTALKFRDDGLHVAVGTSTGSVLIYDLRASK--PLL-----VKDHGYELPIKKLDWQDTD 283 (703)
T ss_pred -----------CccccccCcceEEEecCCceeEEeeccCCcEEEEEcccCC--cee-----ecccCCccceeeecccccC
Confidence 00001234589999999999999987 9999999999733 222 3345445677778997764
Q ss_pred CeEEEEecCCc---EEEecCCCeEEEEEecCCCCCccCcceEEEEECCCCcEEEEEecCCeEEEEECC
Q psy12614 465 TLLLAVSLNGP---LYIIDLSSLEIKYCVDPYKSNLMSDVISLVQMSECKQYIVCADRKSHVVIWKNG 529 (708)
Q Consensus 465 ~~l~~~~~dg~---i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~ 529 (708)
..-.+.+.|.. ||+-.++ +....+.+ ...++.+|+-|++-++++|.+++.+..|-++
T Consensus 284 ~q~~v~S~Dk~~~kiWd~~~G--k~~asiEp------t~~lND~C~~p~sGm~f~Ane~~~m~~yyiP 343 (703)
T KOG2321|consen 284 QQNKVVSMDKRILKIWDECTG--KPMASIEP------TSDLNDFCFVPGSGMFFTANESSKMHTYYIP 343 (703)
T ss_pred CCceEEecchHHhhhcccccC--Cceeeccc------cCCcCceeeecCCceEEEecCCCcceeEEcc
Confidence 33333444544 9988877 55555554 4469999999999999999999888888776
|
|
| >TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL | Back alignment and domain information |
|---|
Probab=99.43 E-value=6.4e-10 Score=112.64 Aligned_cols=305 Identities=14% Similarity=0.100 Sum_probs=187.5
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEeCCEEEEEcCCCcEEEEECCCCeEeEEEeecCCceEE
Q psy12614 37 KSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWFNDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWC 116 (708)
Q Consensus 37 ~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~ 116 (708)
.+..+.+++.+|.|.-+|..+|+.+- ...-.. ......+..++.++.++.++.+..+|..+|+.+............
T Consensus 64 ~~~~v~v~~~~g~v~a~d~~tG~~~W-~~~~~~--~~~~~p~v~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~~~ 140 (377)
T TIGR03300 64 AGGKVYAADADGTVVALDAETGKRLW-RVDLDE--RLSGGVGADGGLVFVGTEKGEVIALDAEDGKELWRAKLSSEVLSP 140 (377)
T ss_pred ECCEEEEECCCCeEEEEEccCCcEee-eecCCC--CcccceEEcCCEEEEEcCCCEEEEEECCCCcEeeeeccCceeecC
Confidence 36688888889999999999998754 222221 112233444888999999999999999999988776543221111
Q ss_pred EEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEeccccccc---EEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEE
Q psy12614 117 LSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGR---ILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKM 192 (708)
Q Consensus 117 ~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~---v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~ 192 (708)
... .+..++.++.++.|+.||.++|+.+........... ..+.... + ..++.+..+ .+..+|+++|+.+...
T Consensus 141 p~v--~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~~~~~sp~~~-~-~~v~~~~~~g~v~ald~~tG~~~W~~ 216 (377)
T TIGR03300 141 PLV--ANGLVVVRTNDGRLTALDAATGERLWTYSRVTPALTLRGSASPVIA-D-GGVLVGFAGGKLVALDLQTGQPLWEQ 216 (377)
T ss_pred CEE--ECCEEEEECCCCeEEEEEcCCCceeeEEccCCCceeecCCCCCEEE-C-CEEEEECCCCEEEEEEccCCCEeeee
Confidence 222 345677778899999999999988754433221100 0111121 2 366777777 9999999999887655
Q ss_pred EecccCCCCCcee---EEEEEEccCCEEEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEE
Q psy12614 193 SLDKSSKFSKNTA---VWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVV 269 (708)
Q Consensus 193 ~~~~~~~~~~~~~---v~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~ 269 (708)
............. +.+-....++.+++++.+|.+..||.++|+.+..... .....+. .++..++.++.+|.+.
T Consensus 217 ~~~~~~g~~~~~~~~~~~~~p~~~~~~vy~~~~~g~l~a~d~~tG~~~W~~~~--~~~~~p~--~~~~~vyv~~~~G~l~ 292 (377)
T TIGR03300 217 RVALPKGRTELERLVDVDGDPVVDGGQVYAVSYQGRVAALDLRSGRVLWKRDA--SSYQGPA--VDDNRLYVTDADGVVV 292 (377)
T ss_pred ccccCCCCCchhhhhccCCccEEECCEEEEEEcCCEEEEEECCCCcEEEeecc--CCccCce--EeCCEEEEECCCCeEE
Confidence 4321000000000 1010111256788888899999999999987766542 1122222 2456888888999999
Q ss_pred EEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEeCCEEEEEcCCCeEEEEeCCCCcee-ecCccCCCCceEE
Q psy12614 270 CFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALHGNRLYSGGLDSYLSLSYYPPKTLV-KYPCTLAQSTPVS 348 (708)
Q Consensus 270 iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~s~~~d~~i~iw~~~~~~~~-~~~~~~~~~~~~~ 348 (708)
.+|..+ |+ ..|... .+ ......+....++.+++++.+|.+.++|..++++. +...........-
T Consensus 293 ~~d~~t--------G~----~~W~~~-~~--~~~~~ssp~i~g~~l~~~~~~G~l~~~d~~tG~~~~~~~~~~~~~~~sp 357 (377)
T TIGR03300 293 ALDRRS--------GS----ELWKND-EL--KYRQLTAPAVVGGYLVVGDFEGYLHWLSREDGSFVARLKTDGSGIASPP 357 (377)
T ss_pred EEECCC--------Cc----EEEccc-cc--cCCccccCEEECCEEEEEeCCCEEEEEECCCCCEEEEEEcCCCccccCC
Confidence 999988 64 223210 11 11122333345889999999999999999877643 3321111122222
Q ss_pred EEcCCcEEEEEcCCeEEEE
Q psy12614 349 LAKDIQHVLLQYTSHLELW 367 (708)
Q Consensus 349 ~s~~~~~l~~~~~~~i~i~ 367 (708)
...++++++.+.++.|..+
T Consensus 358 ~~~~~~l~v~~~dG~l~~~ 376 (377)
T TIGR03300 358 VVVGDGLLVQTRDGDLYAF 376 (377)
T ss_pred EEECCEEEEEeCCceEEEe
Confidence 3345667777888887654
|
Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ. |
| >KOG4547|consensus | Back alignment and domain information |
|---|
Probab=99.41 E-value=1.1e-10 Score=113.20 Aligned_cols=186 Identities=15% Similarity=0.130 Sum_probs=152.9
Q ss_pred CCEEEEEcCCCcEEEEECCCCeEeEEEee---cCCceEEEEEe--------------------cCCCEEEEEeCCCcEEE
Q psy12614 81 NDRLFSGGLQGFVNEYDMRRLNIKSSTAV---TSGTCWCLSVH--------------------KKKRLLAAGTEQGHINL 137 (708)
Q Consensus 81 ~~~l~s~~~d~~i~vwd~~~~~~~~~~~~---~~~~v~~~~~s--------------------~~~~~la~~~~d~~i~i 137 (708)
..++|....||.+++||...++....+.. -.+..++..|. .|...++-|...|.|.+
T Consensus 5 ~~~~A~~~~~g~l~iw~t~~~~~~~e~~p~~~~s~t~~~~~w~L~~~~s~~k~~~~~~~~~~s~~t~~lvlgt~~g~v~~ 84 (541)
T KOG4547|consen 5 LDYFALSTGDGRLRIWDTAKNQLQQEFAPIASLSGTCTYTKWGLSADYSPMKWLSLEKAKKASLDTSMLVLGTPQGSVLL 84 (541)
T ss_pred hheEeecCCCCeEEEEEccCceeeeeeccchhccCcceeEEEEEEeccchHHHHhHHHHhhccCCceEEEeecCCccEEE
Confidence 46889999999999999999887766652 23344444442 23456778888999999
Q ss_pred EEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE
Q psy12614 138 FQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT 216 (708)
Q Consensus 138 wd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 216 (708)
|+...+++.....-..|.+.|.++.++.+-..|.+++.| .+..|+...+..++..... ...+.+++++|||.
T Consensus 85 ys~~~g~it~~~st~~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~~~~~~~~~~~-------~~~~~sl~is~D~~ 157 (541)
T KOG4547|consen 85 YSVAGGEITAKLSTDKHYGNVNEILDAQRLGCIYSVGADLKVVYILEKEKVIIRIWKEQ-------KPLVSSLCISPDGK 157 (541)
T ss_pred EEecCCeEEEEEecCCCCCcceeeecccccCceEecCCceeEEEEecccceeeeeeccC-------CCccceEEEcCCCC
Confidence 999999998766667899999999999999999999999 9999999999988888765 77889999999995
Q ss_pred -EEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCC-----CCEEEE-EecCCeEEEEEccC
Q psy12614 217 -IITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSED-----ENYLYC-AGVDPTVVCFQRTR 275 (708)
Q Consensus 217 -l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~-----~~~l~~-~~~dg~i~iw~~~~ 275 (708)
+++++ ++|.+||+++++.+..+.+|.++|.+++|..+ |.++.+ ...+..+.+|-...
T Consensus 158 ~l~~as--~~ik~~~~~~kevv~~ftgh~s~v~t~~f~~~~~g~~G~~vLssa~~~r~i~~w~v~~ 221 (541)
T KOG4547|consen 158 ILLTAS--RQIKVLDIETKEVVITFTGHGSPVRTLSFTTLIDGIIGKYVLSSAAAERGITVWVVEK 221 (541)
T ss_pred EEEecc--ceEEEEEccCceEEEEecCCCcceEEEEEEEeccccccceeeeccccccceeEEEEEc
Confidence 66665 68999999999999999999999999999877 556554 44456777887654
|
|
| >PRK04792 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.41 E-value=2.3e-11 Score=124.45 Aligned_cols=220 Identities=12% Similarity=0.056 Sum_probs=145.1
Q ss_pred eeeeeccCCCCcEEEEEEcCCCCEEEEEeC-CC--cEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEE-EcCC
Q psy12614 17 HNIKFYAPEPKVINCIACEPKSSRLAVSRA-DQ--SIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFS-GGLQ 90 (708)
Q Consensus 17 ~~~~~~~~h~~~v~~~~~s~~~~~la~~~~-dg--~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s-~~~d 90 (708)
+..+.+..++..+.+.+|||||+.||..+. ++ .|.+||+.+++.. .+.... +.....+|+ |+.|+. .+.+
T Consensus 208 ~~~~~l~~~~~~~~~p~wSPDG~~La~~s~~~g~~~L~~~dl~tg~~~--~lt~~~--g~~~~~~wSPDG~~La~~~~~~ 283 (448)
T PRK04792 208 YNEQMLLRSPEPLMSPAWSPDGRKLAYVSFENRKAEIFVQDIYTQVRE--KVTSFP--GINGAPRFSPDGKKLALVLSKD 283 (448)
T ss_pred CCceEeecCCCcccCceECCCCCEEEEEEecCCCcEEEEEECCCCCeE--EecCCC--CCcCCeeECCCCCEEEEEEeCC
Confidence 334555666778899999999999987653 33 5888999887653 233222 344578899 777764 4556
Q ss_pred Cc--EEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeC-C--CcEEEEEccCCcEEEEEecccccccEEEEEECC
Q psy12614 91 GF--VNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTE-Q--GHINLFQISDEGLLYEKLLDRQQGRILCTAWHS 165 (708)
Q Consensus 91 ~~--i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~-d--~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~ 165 (708)
|. |.+||+.+++.. .+..+.......+|+|||+.|+..+. + ..|+++|+.+++... ..+. .......+|+|
T Consensus 284 g~~~Iy~~dl~tg~~~-~lt~~~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl~~g~~~~-Lt~~--g~~~~~~~~Sp 359 (448)
T PRK04792 284 GQPEIYVVDIATKALT-RITRHRAIDTEPSWHPDGKSLIFTSERGGKPQIYRVNLASGKVSR-LTFE--GEQNLGGSITP 359 (448)
T ss_pred CCeEEEEEECCCCCeE-ECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCEEE-EecC--CCCCcCeeECC
Confidence 64 888898887654 34445556778999999998887654 3 357777887777642 1222 22334578999
Q ss_pred CCCEEEEecCC----eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EE-EEcCCC--cEEEEeCCCCeeE
Q psy12614 166 SGDYLVTGCAA----AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-II-TGDSGG--FVRFWDGKTGVQW 237 (708)
Q Consensus 166 d~~~l~~~~~d----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~-~~~~dg--~i~~wd~~~~~~~ 237 (708)
||++|+..+.+ .|.++|+.+++.. .+... .......|+|||+ ++ +...+| .+.+++. +|...
T Consensus 360 DG~~l~~~~~~~g~~~I~~~dl~~g~~~-~lt~~--------~~d~~ps~spdG~~I~~~~~~~g~~~l~~~~~-~G~~~ 429 (448)
T PRK04792 360 DGRSMIMVNRTNGKFNIARQDLETGAMQ-VLTST--------RLDESPSVAPNGTMVIYSTTYQGKQVLAAVSI-DGRFK 429 (448)
T ss_pred CCCEEEEEEecCCceEEEEEECCCCCeE-EccCC--------CCCCCceECCCCCEEEEEEecCCceEEEEEEC-CCCce
Confidence 99999876543 5677888777643 23211 1122447999996 44 333444 3777786 56666
Q ss_pred EEeeccccCeEEEEEeC
Q psy12614 238 SDVKTHKKDILALTVSE 254 (708)
Q Consensus 238 ~~~~~~~~~i~~~~~s~ 254 (708)
..+..+.+.+...+|+|
T Consensus 430 ~~l~~~~g~~~~p~Wsp 446 (448)
T PRK04792 430 ARLPAGQGEVKSPAWSP 446 (448)
T ss_pred EECcCCCCCcCCCccCC
Confidence 66766666777788877
|
|
| >TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB | Back alignment and domain information |
|---|
Probab=99.40 E-value=1.5e-10 Score=119.36 Aligned_cols=208 Identities=11% Similarity=0.099 Sum_probs=142.6
Q ss_pred cEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCC---CcEEEEECCCCeEeEEEeecCCceEEEEEecCC
Q psy12614 49 SIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQ---GFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKK 123 (708)
Q Consensus 49 ~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d---~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~ 123 (708)
.|.++|...... . .+..+. ..+...+|+ |++|+.+..+ ..|.+||+.+++... +..+.+.+.+++|+|||
T Consensus 171 ~l~~~d~~g~~~-~-~l~~~~--~~~~~p~~Spdg~~la~~~~~~~~~~i~v~d~~~g~~~~-~~~~~~~~~~~~~spDg 245 (417)
T TIGR02800 171 ELQVADYDGANP-Q-TITRSR--EPILSPAWSPDGQKLAYVSFESGKPEIYVQDLATGQREK-VASFPGMNGAPAFSPDG 245 (417)
T ss_pred eEEEEcCCCCCC-E-EeecCC--CceecccCCCCCCEEEEEEcCCCCcEEEEEECCCCCEEE-eecCCCCccceEECCCC
Confidence 588888865443 3 555566 678999999 8888876543 479999999886543 33455667789999999
Q ss_pred CEEEEE-eCC--CcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC----eEEEEEcCCCceEEEEEecc
Q psy12614 124 RLLAAG-TEQ--GHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA----AVRVWDIHKGHAIHKMSLDK 196 (708)
Q Consensus 124 ~~la~~-~~d--~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d----~i~iwd~~~~~~~~~~~~~~ 196 (708)
+.|+.. +.+ ..|++||+.++... .+..+........|+|||+.|+..+.. .|.++|+.+++.. .+...
T Consensus 246 ~~l~~~~~~~~~~~i~~~d~~~~~~~---~l~~~~~~~~~~~~s~dg~~l~~~s~~~g~~~iy~~d~~~~~~~-~l~~~- 320 (417)
T TIGR02800 246 SKLAVSLSKDGNPDIYVMDLDGKQLT---RLTNGPGIDTEPSWSPDGKSIAFTSDRGGSPQIYMMDADGGEVR-RLTFR- 320 (417)
T ss_pred CEEEEEECCCCCccEEEEECCCCCEE---ECCCCCCCCCCEEECCCCCEEEEEECCCCCceEEEEECCCCCEE-EeecC-
Confidence 988754 333 35889999887663 444455555678999999988766532 6888888776643 33322
Q ss_pred cCCCCCceeEEEEEEccCCE-EEEEcCCC---cEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEecCC---eEE
Q psy12614 197 SSKFSKNTAVWCVAFCADFT-IITGDSGG---FVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDP---TVV 269 (708)
Q Consensus 197 ~~~~~~~~~v~~~~~~~~~~-l~~~~~dg---~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg---~i~ 269 (708)
......+.|+|+|+ ++.++.++ .|.+||+.++.. ..+... .......|+||++.|+..+.++ .+.
T Consensus 321 ------~~~~~~~~~spdg~~i~~~~~~~~~~~i~~~d~~~~~~-~~l~~~-~~~~~p~~spdg~~l~~~~~~~~~~~l~ 392 (417)
T TIGR02800 321 ------GGYNASPSWSPDGDLIAFVHREGGGFNIAVMDLDGGGE-RVLTDT-GLDESPSFAPNGRMILYATTRGGRGVLG 392 (417)
T ss_pred ------CCCccCeEECCCCCEEEEEEccCCceEEEEEeCCCCCe-EEccCC-CCCCCceECCCCCEEEEEEeCCCcEEEE
Confidence 44566789999996 66555554 789999887644 333322 2345678999999998877654 344
Q ss_pred EEEcc
Q psy12614 270 CFQRT 274 (708)
Q Consensus 270 iw~~~ 274 (708)
+.+..
T Consensus 393 ~~~~~ 397 (417)
T TIGR02800 393 LVSTD 397 (417)
T ss_pred EEECC
Confidence 54443
|
The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear. |
| >PRK00178 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.40 E-value=3.2e-11 Score=124.25 Aligned_cols=221 Identities=11% Similarity=0.018 Sum_probs=146.7
Q ss_pred eeeeeccCCCCcEEEEEEcCCCCEEEEEeCC---CcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEE-EEcCC
Q psy12614 17 HNIKFYAPEPKVINCIACEPKSSRLAVSRAD---QSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLF-SGGLQ 90 (708)
Q Consensus 17 ~~~~~~~~h~~~v~~~~~s~~~~~la~~~~d---g~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~-s~~~d 90 (708)
...+.+..+...+...+|||||+.||..+.+ ..|.+||+.+++.. .+.... +.+...+|+ |++|+ +...+
T Consensus 189 ~~~~~l~~~~~~~~~p~wSpDG~~la~~s~~~~~~~l~~~~l~~g~~~--~l~~~~--g~~~~~~~SpDG~~la~~~~~~ 264 (430)
T PRK00178 189 ARAVTLLQSREPILSPRWSPDGKRIAYVSFEQKRPRIFVQNLDTGRRE--QITNFE--GLNGAPAWSPDGSKLAFVLSKD 264 (430)
T ss_pred CCceEEecCCCceeeeeECCCCCEEEEEEcCCCCCEEEEEECCCCCEE--EccCCC--CCcCCeEECCCCCEEEEEEccC
Confidence 3444556677889999999999999876543 36999999988753 333333 556678999 77776 45455
Q ss_pred C--cEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeC-C--CcEEEEEccCCcEEEEEecccccccEEEEEECC
Q psy12614 91 G--FVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTE-Q--GHINLFQISDEGLLYEKLLDRQQGRILCTAWHS 165 (708)
Q Consensus 91 ~--~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~-d--~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~ 165 (708)
| .|.+||+.+++.. .+..+........|+|||+.|+..+. + ..|+++|+.+++... .... ........|+|
T Consensus 265 g~~~Iy~~d~~~~~~~-~lt~~~~~~~~~~~spDg~~i~f~s~~~g~~~iy~~d~~~g~~~~-lt~~--~~~~~~~~~Sp 340 (430)
T PRK00178 265 GNPEIYVMDLASRQLS-RVTNHPAIDTEPFWGKDGRTLYFTSDRGGKPQIYKVNVNGGRAER-VTFV--GNYNARPRLSA 340 (430)
T ss_pred CCceEEEEECCCCCeE-EcccCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECCCCCEEE-eecC--CCCccceEECC
Confidence 5 6888899987654 34455556677899999998887664 2 358888888877542 1222 22334678999
Q ss_pred CCCEEEEecCC----eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEc-CC--CcEEEEeCCCCeeE
Q psy12614 166 SGDYLVTGCAA----AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGD-SG--GFVRFWDGKTGVQW 237 (708)
Q Consensus 166 d~~~l~~~~~d----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~-~d--g~i~~wd~~~~~~~ 237 (708)
||++|+..+.+ .|.+||+.+++.. .+... .......|+|||+ ++..+ .+ ..|.+++.. +...
T Consensus 341 dg~~i~~~~~~~~~~~l~~~dl~tg~~~-~lt~~--------~~~~~p~~spdg~~i~~~~~~~g~~~l~~~~~~-g~~~ 410 (430)
T PRK00178 341 DGKTLVMVHRQDGNFHVAAQDLQRGSVR-ILTDT--------SLDESPSVAPNGTMLIYATRQQGRGVLMLVSIN-GRVR 410 (430)
T ss_pred CCCEEEEEEccCCceEEEEEECCCCCEE-EccCC--------CCCCCceECCCCCEEEEEEecCCceEEEEEECC-CCce
Confidence 99999876542 5889999887643 33221 1122458999996 44333 33 347777774 4444
Q ss_pred EEeeccccCeEEEEEeCC
Q psy12614 238 SDVKTHKKDILALTVSED 255 (708)
Q Consensus 238 ~~~~~~~~~i~~~~~s~~ 255 (708)
..+..+.+.+...+|+|-
T Consensus 411 ~~l~~~~g~~~~p~ws~~ 428 (430)
T PRK00178 411 LPLPTAQGEVREPSWSPY 428 (430)
T ss_pred EECcCCCCCcCCCccCCC
Confidence 455555566777777763
|
|
| >TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB | Back alignment and domain information |
|---|
Probab=99.40 E-value=1.3e-10 Score=119.84 Aligned_cols=217 Identities=12% Similarity=0.044 Sum_probs=142.4
Q ss_pred CcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCC---CcEEEEEccCCcEEEEEecccccccEEEEEECCCC
Q psy12614 91 GFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQ---GHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSG 167 (708)
Q Consensus 91 ~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d---~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~ 167 (708)
..|.++|..... .+.+..+...+.+.+|+|||++||.+..+ ..|++||+.+++.. .+..+.+.+.+++|+|||
T Consensus 170 ~~l~~~d~~g~~-~~~l~~~~~~~~~p~~Spdg~~la~~~~~~~~~~i~v~d~~~g~~~---~~~~~~~~~~~~~~spDg 245 (417)
T TIGR02800 170 YELQVADYDGAN-PQTITRSREPILSPAWSPDGQKLAYVSFESGKPEIYVQDLATGQRE---KVASFPGMNGAPAFSPDG 245 (417)
T ss_pred ceEEEEcCCCCC-CEEeecCCCceecccCCCCCCEEEEEEcCCCCcEEEEEECCCCCEE---EeecCCCCccceEECCCC
Confidence 468888886544 34455566778999999999999987653 47999999988764 233445567789999999
Q ss_pred CEEEEe-cC--C-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEc-CCC--cEEEEeCCCCeeEEE
Q psy12614 168 DYLVTG-CA--A-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGD-SGG--FVRFWDGKTGVQWSD 239 (708)
Q Consensus 168 ~~l~~~-~~--d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~-~dg--~i~~wd~~~~~~~~~ 239 (708)
+.|+.. +. + .|.+||+.++.... +... ........|+|||+ ++..+ ..+ .|+++|+.+++. ..
T Consensus 246 ~~l~~~~~~~~~~~i~~~d~~~~~~~~-l~~~-------~~~~~~~~~s~dg~~l~~~s~~~g~~~iy~~d~~~~~~-~~ 316 (417)
T TIGR02800 246 SKLAVSLSKDGNPDIYVMDLDGKQLTR-LTNG-------PGIDTEPSWSPDGKSIAFTSDRGGSPQIYMMDADGGEV-RR 316 (417)
T ss_pred CEEEEEECCCCCccEEEEECCCCCEEE-CCCC-------CCCCCCEEECCCCCEEEEEECCCCCceEEEEECCCCCE-EE
Confidence 988654 33 3 69999998775433 2211 23344678999995 55443 333 588888877654 34
Q ss_pred eeccccCeEEEEEeCCCCEEEEEecCC---eEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCE
Q psy12614 240 VKTHKKDILALTVSEDENYLYCAGVDP---TVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNR 314 (708)
Q Consensus 240 ~~~~~~~i~~~~~s~~~~~l~~~~~dg---~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~ 314 (708)
+..+......+.|+|++++++.++.++ .|.+|++.+ +. ...+... .......|+ ++.
T Consensus 317 l~~~~~~~~~~~~spdg~~i~~~~~~~~~~~i~~~d~~~--------~~---------~~~l~~~-~~~~~p~~spdg~~ 378 (417)
T TIGR02800 317 LTFRGGYNASPSWSPDGDLIAFVHREGGGFNIAVMDLDG--------GG---------ERVLTDT-GLDESPSFAPNGRM 378 (417)
T ss_pred eecCCCCccCeEECCCCCEEEEEEccCCceEEEEEeCCC--------CC---------eEEccCC-CCCCCceECCCCCE
Confidence 444556677889999999999888775 788888877 42 1112111 122334566 666
Q ss_pred EEEEcCCC---eEEEEeCCCCceeecC
Q psy12614 315 LYSGGLDS---YLSLSYYPPKTLVKYP 338 (708)
Q Consensus 315 l~s~~~d~---~i~iw~~~~~~~~~~~ 338 (708)
|+..+.++ .+.+.+........+.
T Consensus 379 l~~~~~~~~~~~l~~~~~~g~~~~~~~ 405 (417)
T TIGR02800 379 ILYATTRGGRGVLGLVSTDGRFRARLP 405 (417)
T ss_pred EEEEEeCCCcEEEEEEECCCceeeECC
Confidence 76665543 4555565554443333
|
The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear. |
| >TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL | Back alignment and domain information |
|---|
Probab=99.38 E-value=2.7e-09 Score=108.11 Aligned_cols=300 Identities=15% Similarity=0.151 Sum_probs=185.9
Q ss_pred EEeCCEEEEEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEeccccccc
Q psy12614 78 TWFNDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGR 157 (708)
Q Consensus 78 ~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~ 157 (708)
...++.+++++.+|.|..+|..+|+.+.............+. ++..+++++.++.+..+|..+|+......+.+ .
T Consensus 62 ~v~~~~v~v~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~p~v--~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~---~ 136 (377)
T TIGR03300 62 AVAGGKVYAADADGTVVALDAETGKRLWRVDLDERLSGGVGA--DGGLVFVGTEKGEVIALDAEDGKELWRAKLSS---E 136 (377)
T ss_pred EEECCEEEEECCCCeEEEEEccCCcEeeeecCCCCcccceEE--cCCEEEEEcCCCEEEEEECCCCcEeeeeccCc---e
Confidence 334889999999999999999999998876654432222322 46778888899999999999999876544432 2
Q ss_pred EEE-EEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEEEEcCCCcEEEEeCCCCe
Q psy12614 158 ILC-TAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGV 235 (708)
Q Consensus 158 v~~-~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~wd~~~~~ 235 (708)
+.+ ... .+..++.++.+ .+..||.++|+.+.+........ .... ..+... .++.++.+..+|.+..+|.++|+
T Consensus 137 ~~~~p~v--~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~-~~~~-~~sp~~-~~~~v~~~~~~g~v~ald~~tG~ 211 (377)
T TIGR03300 137 VLSPPLV--ANGLVVVRTNDGRLTALDAATGERLWTYSRVTPAL-TLRG-SASPVI-ADGGVLVGFAGGKLVALDLQTGQ 211 (377)
T ss_pred eecCCEE--ECCEEEEECCCCeEEEEEcCCCceeeEEccCCCce-eecC-CCCCEE-ECCEEEEECCCCEEEEEEccCCC
Confidence 221 111 24466667777 99999999999888776431000 0000 011111 24568888889999999999998
Q ss_pred eEEEeeccc----cC------e-EEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccc
Q psy12614 236 QWSDVKTHK----KD------I-LALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGD 304 (708)
Q Consensus 236 ~~~~~~~~~----~~------i-~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 304 (708)
.+....... .. + ....+ .+..+++++.+|.++.||..+ |+ ..|.. . ...
T Consensus 212 ~~W~~~~~~~~g~~~~~~~~~~~~~p~~--~~~~vy~~~~~g~l~a~d~~t--------G~----~~W~~----~--~~~ 271 (377)
T TIGR03300 212 PLWEQRVALPKGRTELERLVDVDGDPVV--DGGQVYAVSYQGRVAALDLRS--------GR----VLWKR----D--ASS 271 (377)
T ss_pred EeeeeccccCCCCCchhhhhccCCccEE--ECCEEEEEEcCCEEEEEECCC--------Cc----EEEee----c--cCC
Confidence 765432110 00 0 11112 245788888899999999998 65 23322 1 112
Q ss_pred eEEEEEeCCEEEEEcCCCeEEEEeCCCCcee-ecCcc-CCCCceEEEEcCCcEEEEEcCCeEEEEEecCCCCCCCCCCCC
Q psy12614 305 VKSLALHGNRLYSGGLDSYLSLSYYPPKTLV-KYPCT-LAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSN 382 (708)
Q Consensus 305 v~~l~~~~~~l~s~~~d~~i~iw~~~~~~~~-~~~~~-~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~ 382 (708)
.......++.++.++.+|.+..+|..++... +.... ........+ .++.+++...++.+.+++..+++
T Consensus 272 ~~~p~~~~~~vyv~~~~G~l~~~d~~tG~~~W~~~~~~~~~~ssp~i-~g~~l~~~~~~G~l~~~d~~tG~--------- 341 (377)
T TIGR03300 272 YQGPAVDDNRLYVTDADGVVVALDRRSGSELWKNDELKYRQLTAPAV-VGGYLVVGDFEGYLHWLSREDGS--------- 341 (377)
T ss_pred ccCceEeCCEEEEECCCCeEEEEECCCCcEEEccccccCCccccCEE-ECCEEEEEeCCCEEEEEECCCCC---------
Confidence 2334455888888999999999999877633 22111 111122222 23445555688999999988877
Q ss_pred CCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEEEcCCceEEE
Q psy12614 383 TTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYSTESCVRLH 429 (708)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~d~~i~i~ 429 (708)
.+.+.......-..+.++ .++++++.+.||.|..|
T Consensus 342 -----------~~~~~~~~~~~~~~sp~~-~~~~l~v~~~dG~l~~~ 376 (377)
T TIGR03300 342 -----------FVARLKTDGSGIASPPVV-VGDGLLVQTRDGDLYAF 376 (377)
T ss_pred -----------EEEEEEcCCCccccCCEE-ECCEEEEEeCCceEEEe
Confidence 444443322211222233 34555556778888765
|
Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ. |
| >PRK00178 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.38 E-value=2.9e-10 Score=117.16 Aligned_cols=209 Identities=11% Similarity=0.070 Sum_probs=140.5
Q ss_pred cEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCC---CcEEEEECCCCeEeEEEeecCCceEEEEEecCC
Q psy12614 49 SIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQ---GFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKK 123 (708)
Q Consensus 49 ~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d---~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~ 123 (708)
.|.++|...+.. . .+..+. ..+...+|+ |+.|+..+.+ ..|.+||+.+++... +....+.+.+.+|+|||
T Consensus 180 ~l~~~d~~g~~~-~-~l~~~~--~~~~~p~wSpDG~~la~~s~~~~~~~l~~~~l~~g~~~~-l~~~~g~~~~~~~SpDG 254 (430)
T PRK00178 180 TLQRSDYDGARA-V-TLLQSR--EPILSPRWSPDGKRIAYVSFEQKRPRIFVQNLDTGRREQ-ITNFEGLNGAPAWSPDG 254 (430)
T ss_pred EEEEECCCCCCc-e-EEecCC--CceeeeeECCCCCEEEEEEcCCCCCEEEEEECCCCCEEE-ccCCCCCcCCeEECCCC
Confidence 478888876553 2 455566 789999999 8888766533 469999999886543 33333455678999999
Q ss_pred CEEEEE-eCCC--cEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecC---C-eEEEEEcCCCceEEEEEecc
Q psy12614 124 RLLAAG-TEQG--HINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCA---A-AVRVWDIHKGHAIHKMSLDK 196 (708)
Q Consensus 124 ~~la~~-~~d~--~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~---d-~i~iwd~~~~~~~~~~~~~~ 196 (708)
+.|+.. ..++ .|++||+.+++.. .+..+........|+|||+.|+..+. . .|.++|+.+++.. .+...
T Consensus 255 ~~la~~~~~~g~~~Iy~~d~~~~~~~---~lt~~~~~~~~~~~spDg~~i~f~s~~~g~~~iy~~d~~~g~~~-~lt~~- 329 (430)
T PRK00178 255 SKLAFVLSKDGNPEIYVMDLASRQLS---RVTNHPAIDTEPFWGKDGRTLYFTSDRGGKPQIYKVNVNGGRAE-RVTFV- 329 (430)
T ss_pred CEEEEEEccCCCceEEEEECCCCCeE---EcccCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECCCCCEE-EeecC-
Confidence 988754 3444 6888899988763 45555556677899999998876653 2 6888898877643 33322
Q ss_pred cCCCCCceeEEEEEEccCCE-EEEEcC-CC--cEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEecC---CeEE
Q psy12614 197 SSKFSKNTAVWCVAFCADFT-IITGDS-GG--FVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVD---PTVV 269 (708)
Q Consensus 197 ~~~~~~~~~v~~~~~~~~~~-l~~~~~-dg--~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d---g~i~ 269 (708)
........|+|||+ ++.... ++ .|.+||+.+++... +.. ........|+|||+.++..+.+ ..+.
T Consensus 330 ------~~~~~~~~~Spdg~~i~~~~~~~~~~~l~~~dl~tg~~~~-lt~-~~~~~~p~~spdg~~i~~~~~~~g~~~l~ 401 (430)
T PRK00178 330 ------GNYNARPRLSADGKTLVMVHRQDGNFHVAAQDLQRGSVRI-LTD-TSLDESPSVAPNGTMLIYATRQQGRGVLM 401 (430)
T ss_pred ------CCCccceEECCCCCEEEEEEccCCceEEEEEECCCCCEEE-ccC-CCCCCCceECCCCCEEEEEEecCCceEEE
Confidence 12234568999996 444333 33 58899998876533 321 2222356899999999876654 2466
Q ss_pred EEEccC
Q psy12614 270 CFQRTR 275 (708)
Q Consensus 270 iw~~~~ 275 (708)
+++...
T Consensus 402 ~~~~~g 407 (430)
T PRK00178 402 LVSING 407 (430)
T ss_pred EEECCC
Confidence 666654
|
|
| >KOG4532|consensus | Back alignment and domain information |
|---|
Probab=99.38 E-value=1.9e-10 Score=99.92 Aligned_cols=240 Identities=9% Similarity=-0.000 Sum_probs=170.2
Q ss_pred EEEEcC-----CCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEE---eCCEEEEEcCCCcEEEEECCCCe
Q psy12614 31 CIACEP-----KSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTW---FNDRLFSGGLQGFVNEYDMRRLN 102 (708)
Q Consensus 31 ~~~~s~-----~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~---~~~~l~s~~~d~~i~vwd~~~~~ 102 (708)
.+.|-| .-.+||.|+..|...+|...+.+........|. ..|+-+.- +.-.+..++.|.++++.+++.+.
T Consensus 72 g~~F~p~s~~~kc~~la~gG~~g~fd~~~~~tn~~h~~~cd~sn--n~v~~~~r~cd~~~~~~i~sndht~k~~~~~~~s 149 (344)
T KOG4532|consen 72 GMTFTPGSFINKCVTLADGGASGQFDLFACNTNDGHLYQCDVSN--NDVTLVKRYCDLKFPLNIASNDHTGKTMVVSGDS 149 (344)
T ss_pred cccccchHhhccccEEEeccccceeeeecccCcccceeeecccc--cchhhhhhhcccccceeeccCCcceeEEEEecCc
Confidence 456666 335899999999999999998665444444444 44433322 15567788899999999887765
Q ss_pred EeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCC-cEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEE
Q psy12614 103 IKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDE-GLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRV 180 (708)
Q Consensus 103 ~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~-~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~i 180 (708)
....+....-.+.++++++|++++++.++...|..|.+... +.+.........+.-.+..|+.....+|++..| ++.|
T Consensus 150 ~~~~~h~~~~~~ns~~~snd~~~~~~Vgds~~Vf~y~id~~sey~~~~~~a~t~D~gF~~S~s~~~~~FAv~~Qdg~~~I 229 (344)
T KOG4532|consen 150 NKFAVHNQNLTQNSLHYSNDPSWGSSVGDSRRVFRYAIDDESEYIENIYEAPTSDHGFYNSFSENDLQFAVVFQDGTCAI 229 (344)
T ss_pred ccceeeccccceeeeEEcCCCceEEEecCCCcceEEEeCCccceeeeeEecccCCCceeeeeccCcceEEEEecCCcEEE
Confidence 44333322234889999999999999999999999999854 333222444555667889999999999999999 9999
Q ss_pred EEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE---EEEEcCCCcEEEEeCCCCeeEEEee-------ccc-cCeEE
Q psy12614 181 WDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT---IITGDSGGFVRFWDGKTGVQWSDVK-------THK-KDILA 249 (708)
Q Consensus 181 wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~---l~~~~~dg~i~~wd~~~~~~~~~~~-------~~~-~~i~~ 249 (708)
||++.............. .|.+.+..+.|++.|. |+..-.-+.+.+.|+++++..+.+. .|. ..|..
T Consensus 230 ~DVR~~~tpm~~~sstrp--~hnGa~R~c~Fsl~g~lDLLf~sEhfs~~hv~D~R~~~~~q~I~i~~d~~~~~~tq~ifg 307 (344)
T KOG4532|consen 230 YDVRNMATPMAEISSTRP--HHNGAFRVCRFSLYGLLDLLFISEHFSRVHVVDTRNYVNHQVIVIPDDVERKHNTQHIFG 307 (344)
T ss_pred EEecccccchhhhcccCC--CCCCceEEEEecCCCcceEEEEecCcceEEEEEcccCceeeEEecCcccccccccccccc
Confidence 999876544433322211 3489999999998772 5555556889999999987655442 222 33778
Q ss_pred EEEeCCCCEEEEEecCCeEEEEEccC
Q psy12614 250 LTVSEDENYLYCAGVDPTVVCFQRTR 275 (708)
Q Consensus 250 ~~~s~~~~~l~~~~~dg~i~iw~~~~ 275 (708)
-.|+.++..+.+.+.+ .+.-|++..
T Consensus 308 t~f~~~n~s~~v~~e~-~~ae~ni~s 332 (344)
T KOG4532|consen 308 TNFNNENESNDVKNEL-QGAEYNILS 332 (344)
T ss_pred ccccCCCcccccccch-hhheeeccc
Confidence 8888888777776654 566677666
|
|
| >KOG1409|consensus | Back alignment and domain information |
|---|
Probab=99.37 E-value=2.1e-10 Score=103.44 Aligned_cols=297 Identities=9% Similarity=0.079 Sum_probs=197.2
Q ss_pred EeEEEeccccceEEEEEe--CCEEEEEcCCCeEEEEeCCC-Cc-eeecCc-cCCCCceEEEEcCCcEEEEE-cCCeEEEE
Q psy12614 294 RSVNRVIHEGDVKSLALH--GNRLYSGGLDSYLSLSYYPP-KT-LVKYPC-TLAQSTPVSLAKDIQHVLLQ-YTSHLELW 367 (708)
Q Consensus 294 ~~~~~~~~~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~-~~-~~~~~~-~~~~~~~~~~s~~~~~l~~~-~~~~i~i~ 367 (708)
....+.+|...+.....- .+-+++.+.|.++++|--.+ .+ .+.+.- ......++.+.++.+.|+++ ..+.+.-+
T Consensus 16 ll~~~eG~~d~vn~~~l~~~e~gv~~~s~drtvrv~lkrds~q~wpsI~~~mP~~~~~~~y~~e~~~L~vg~~ngtvtef 95 (404)
T KOG1409|consen 16 LLSKIEGSQDDVNAAILIPKEEGVISVSEDRTVRVWLKRDSGQYWPSIYHYMPSPCSAMEYVSESRRLYVGQDNGTVTEF 95 (404)
T ss_pred hhhhhcCchhhhhhheeccCCCCeEEccccceeeeEEeccccccCchhhhhCCCCceEeeeeccceEEEEEEecceEEEE
Confidence 456677888887766554 78899999999999995433 33 122210 12344667788888888886 66777777
Q ss_pred EecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEEE-cCCceEEEEEEecCCcceeEEeecC
Q psy12614 368 SLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYS-TESCVRLHSLDLDGDKPQISRIKNL 446 (708)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~ 446 (708)
.+.... ......+....|...+..+.|+-.-.++++. .|..+ .|.....++.+--..+.
T Consensus 96 s~sedf-----------------nkm~~~r~~~~h~~~v~~~if~~~~e~V~s~~~dk~~-~~hc~e~~~~lg~Y~~~-- 155 (404)
T KOG1409|consen 96 ALSEDF-----------------NKMTFLKDYLAHQARVSAIVFSLTHEWVLSTGKDKQF-AWHCTESGNRLGGYNFE-- 155 (404)
T ss_pred Ehhhhh-----------------hhcchhhhhhhhhcceeeEEecCCceeEEEeccccce-EEEeeccCCcccceEee--
Confidence 766533 1223344555788899999998888888874 46554 44433322221111100
Q ss_pred CcccccceeEEEEEecCCCeEEEEecCCc--EEEecCCCeEEEEEecCCCCCccCcceEEEEECCCCcEEEEEecCCeEE
Q psy12614 447 PAPLFKSIFTHVLISADSTLLLAVSLNGP--LYIIDLSSLEIKYCVDPYKSNLMSDVISLVQMSECKQYIVCADRKSHVV 524 (708)
Q Consensus 447 ~~~~~~~~i~~~~~s~d~~~l~~~~~dg~--i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~ 524 (708)
..-+++.+.-. +..+|...|. +..+....+..+..+. +| .+.+.++.|.|..+.|.+|..|..+.
T Consensus 156 ------~~~t~~~~d~~--~~fvGd~~gqvt~lr~~~~~~~~i~~~~---~h--~~~~~~l~Wd~~~~~LfSg~~d~~vi 222 (404)
T KOG1409|consen 156 ------TPASALQFDAL--YAFVGDHSGQITMLKLEQNGCQLITTFN---GH--TGEVTCLKWDPGQRLLFSGASDHSVI 222 (404)
T ss_pred ------ccCCCCceeeE--EEEecccccceEEEEEeecCCceEEEEc---Cc--ccceEEEEEcCCCcEEEeccccCceE
Confidence 00011222111 4444555555 5555555445555554 56 88999999999999999999999999
Q ss_pred EEECC--cee-eecCCCCCCceEEEEcCCCCEEEEEecCCcEEEEEcCCCCC--Cchhh---------------------
Q psy12614 525 IWKNG--QHH-ASLPRYRKPSTAMAIHPTLSTLVTVYSDHRIVEFDLNRKAF--TTFSR--------------------- 578 (708)
Q Consensus 525 iw~~~--~~~-~~~~~~~~~v~~l~~s~d~~~l~~~~~dg~i~vwd~~~~~~--~~~~~--------------------- 578 (708)
+||+. ++. +.+.+|...|..+...+--+.|.+++.||.|.+|+++.... .+|..
T Consensus 223 ~wdigg~~g~~~el~gh~~kV~~l~~~~~t~~l~S~~edg~i~~w~mn~~r~etpewl~s~~cQ~c~qpffwn~~~m~~~ 302 (404)
T KOG1409|consen 223 MWDIGGRKGTAYELQGHNDKVQALSYAQHTRQLISCGEDGGIVVWNMNVKRVETPEWLDSDSCQKCNQPFFWNFRQMWDR 302 (404)
T ss_pred EEeccCCcceeeeeccchhhhhhhhhhhhheeeeeccCCCeEEEEeccceeecCccccccchhhhhCchHHHHHHHHHhh
Confidence 99999 443 48999999999999998899999999999999999864321 12221
Q ss_pred ------------------------------------------------hhhccCchhhhcCCCCeeEEEeCCCCCceEEE
Q psy12614 579 ------------------------------------------------KLETNHPNEWLSRQLPVLGIEFDPQDSSLIYL 610 (708)
Q Consensus 579 ------------------------------------------------~~~~~~~~~~~~~~~~i~~l~~s~~~~~l~~~ 610 (708)
.......+....-...|.++.+..+-..|+|+
T Consensus 303 k~~glr~h~crkcg~avc~~c~s~~~~~p~mg~e~~vR~~~~c~~~i~~~~~t~LA~phei~tgItamhlqetlglLvTs 382 (404)
T KOG1409|consen 303 KQLGLRQHHCRKCGKAVCGKCSSNRSSYPTMGFEFSVRVCDSCYPTIKDEERTPLAIPHEIKTGITAMHLQETLGLLVTS 382 (404)
T ss_pred hhhhhhhhhhhhhhhhcCcccccCccccccccceeEEEEecccchhhhcCCCCccccccccccceeEEEhhhhccceeec
Confidence 00111112222233478999999999999999
Q ss_pred EcCeeEEEEecCC
Q psy12614 611 MDDSALCVINKNK 623 (708)
Q Consensus 611 ~~d~~i~~wd~~~ 623 (708)
+.|..|+|||+..
T Consensus 383 G~~Rvi~iwd~~~ 395 (404)
T KOG1409|consen 383 GTDRVIKIWDVRS 395 (404)
T ss_pred CCceEEEEEechh
Confidence 9999999999963
|
|
| >PRK04792 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.36 E-value=4.8e-10 Score=114.78 Aligned_cols=232 Identities=12% Similarity=0.085 Sum_probs=135.5
Q ss_pred eEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEEE--cC--CeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEE
Q psy12614 323 YLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQ--YT--SHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKM 398 (708)
Q Consensus 323 ~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~--~~--~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (708)
.+.++|.++...+.+...........|+|||+.++.. .+ ..|.++++.+++ ....
T Consensus 199 ~l~i~d~dG~~~~~l~~~~~~~~~p~wSPDG~~La~~s~~~g~~~L~~~dl~tg~-------------------~~~l-- 257 (448)
T PRK04792 199 QLMIADYDGYNEQMLLRSPEPLMSPAWSPDGRKLAYVSFENRKAEIFVQDIYTQV-------------------REKV-- 257 (448)
T ss_pred EEEEEeCCCCCceEeecCCCcccCceECCCCCEEEEEEecCCCcEEEEEECCCCC-------------------eEEe--
Confidence 6667787776555544333455678999999988864 22 358888887655 1111
Q ss_pred EecCCCceEEEEeCCCCcEEEE-Ec-CCceEEEEEEecCCcceeEEeecCCcccccceeEEEEEecCCCeEEEEecC-Cc
Q psy12614 399 SAVNNATIRCSVVSNDGKYVAY-ST-ESCVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVLISADSTLLLAVSLN-GP 475 (708)
Q Consensus 399 ~~~~~~~i~~~~~s~~g~~l~~-~~-d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~~~~~d-g~ 475 (708)
..........+|+|||+.|+. .. ++...||-++...+. ..+ +..+.. .....+|+|||+.|+..+.. +.
T Consensus 258 -t~~~g~~~~~~wSPDG~~La~~~~~~g~~~Iy~~dl~tg~--~~~---lt~~~~--~~~~p~wSpDG~~I~f~s~~~g~ 329 (448)
T PRK04792 258 -TSFPGINGAPRFSPDGKKLALVLSKDGQPEIYVVDIATKA--LTR---ITRHRA--IDTEPSWHPDGKSLIFTSERGGK 329 (448)
T ss_pred -cCCCCCcCCeeECCCCCEEEEEEeCCCCeEEEEEECCCCC--eEE---CccCCC--CccceEECCCCCEEEEEECCCCC
Confidence 112233346799999999886 33 665444444332232 233 333322 23347999999998877654 33
Q ss_pred --EEEecCCCeEEEEEecCCCCCccCcceEEEEECCCCcEEEEEec-CC--eEEEEECCcee-eecCCCCCCceEEEEcC
Q psy12614 476 --LYIIDLSSLEIKYCVDPYKSNLMSDVISLVQMSECKQYIVCADR-KS--HVVIWKNGQHH-ASLPRYRKPSTAMAIHP 549 (708)
Q Consensus 476 --i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~-d~--~i~iw~~~~~~-~~~~~~~~~v~~l~~s~ 549 (708)
||.++..+.+.. .+. ..+. .....+|+|||++|+..+. ++ .|.++|+.+.. ..+... .......|+|
T Consensus 330 ~~Iy~~dl~~g~~~-~Lt-~~g~----~~~~~~~SpDG~~l~~~~~~~g~~~I~~~dl~~g~~~~lt~~-~~d~~ps~sp 402 (448)
T PRK04792 330 PQIYRVNLASGKVS-RLT-FEGE----QNLGGSITPDGRSMIMVNRTNGKFNIARQDLETGAMQVLTST-RLDESPSVAP 402 (448)
T ss_pred ceEEEEECCCCCEE-EEe-cCCC----CCcCeeECCCCCEEEEEEecCCceEEEEEECCCCCeEEccCC-CCCCCceECC
Confidence 777664332322 221 1121 2345789999999988764 33 45566776432 233322 1233568999
Q ss_pred CCCEEEEEecC-C--cEEEEEcCCCCCCchhhhhhccCchhhhcCCCCeeEEEeCC
Q psy12614 550 TLSTLVTVYSD-H--RIVEFDLNRKAFTTFSRKLETNHPNEWLSRQLPVLGIEFDP 602 (708)
Q Consensus 550 d~~~l~~~~~d-g--~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~ 602 (708)
||+.|+..+.+ + .+++++.+..... .+..+.+.+...+|+|
T Consensus 403 dG~~I~~~~~~~g~~~l~~~~~~G~~~~------------~l~~~~g~~~~p~Wsp 446 (448)
T PRK04792 403 NGTMVIYSTTYQGKQVLAAVSIDGRFKA------------RLPAGQGEVKSPAWSP 446 (448)
T ss_pred CCCEEEEEEecCCceEEEEEECCCCceE------------ECcCCCCCcCCCccCC
Confidence 99998877654 3 3777777544322 2333445566777876
|
|
| >KOG4547|consensus | Back alignment and domain information |
|---|
Probab=99.35 E-value=3.2e-10 Score=110.06 Aligned_cols=189 Identities=15% Similarity=0.211 Sum_probs=152.6
Q ss_pred cCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe---C-------------------CEEEEEcCCCc
Q psy12614 35 EPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF---N-------------------DRLFSGGLQGF 92 (708)
Q Consensus 35 s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~---~-------------------~~l~s~~~d~~ 92 (708)
.|-+.|+|....||.++|||..+++.....-+.-...+.-++..|. + ..++-|...|.
T Consensus 2 ~~~~~~~A~~~~~g~l~iw~t~~~~~~~e~~p~~~~s~t~~~~~w~L~~~~s~~k~~~~~~~~~~s~~t~~lvlgt~~g~ 81 (541)
T KOG4547|consen 2 PPALDYFALSTGDGRLRIWDTAKNQLQQEFAPIASLSGTCTYTKWGLSADYSPMKWLSLEKAKKASLDTSMLVLGTPQGS 81 (541)
T ss_pred CchhheEeecCCCCeEEEEEccCceeeeeeccchhccCcceeEEEEEEeccchHHHHhHHHHhhccCCceEEEeecCCcc
Confidence 3556899999999999999999987654222222224566677775 1 26778888999
Q ss_pred EEEEECCCCeEeEEEe--ecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEE
Q psy12614 93 VNEYDMRRLNIKSSTA--VTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYL 170 (708)
Q Consensus 93 i~vwd~~~~~~~~~~~--~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l 170 (708)
|.++++..|+....+. .|.+.|.++.++.+-..|.+++.|+.+..|+...+... ......+..+.+++.+|||..+
T Consensus 82 v~~ys~~~g~it~~~st~~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~~~~~--~~~~~~~~~~~sl~is~D~~~l 159 (541)
T KOG4547|consen 82 VLLYSVAGGEITAKLSTDKHYGNVNEILDAQRLGCIYSVGADLKVVYILEKEKVII--RIWKEQKPLVSSLCISPDGKIL 159 (541)
T ss_pred EEEEEecCCeEEEEEecCCCCCcceeeecccccCceEecCCceeEEEEecccceee--eeeccCCCccceEEEcCCCCEE
Confidence 9999999999888876 79999999999999999999999999999999998887 7788888899999999999999
Q ss_pred EEecCCeEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccC-----CE-EE-EEcCCCcEEEEeCCC
Q psy12614 171 VTGCAAAVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCAD-----FT-II-TGDSGGFVRFWDGKT 233 (708)
Q Consensus 171 ~~~~~d~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-----~~-l~-~~~~dg~i~~wd~~~ 233 (708)
++++. .|++||+++++.+..+. +|.++|.++.|..+ |. ++ +...+..+.+|-.+.
T Consensus 160 ~~as~-~ik~~~~~~kevv~~ft-------gh~s~v~t~~f~~~~~g~~G~~vLssa~~~r~i~~w~v~~ 221 (541)
T KOG4547|consen 160 LTASR-QIKVLDIETKEVVITFT-------GHGSPVRTLSFTTLIDGIIGKYVLSSAAAERGITVWVVEK 221 (541)
T ss_pred Eeccc-eEEEEEccCceEEEEec-------CCCcceEEEEEEEeccccccceeeeccccccceeEEEEEc
Confidence 98876 59999999999999987 55999999999876 43 33 334455677776543
|
|
| >PRK01029 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.33 E-value=9.3e-10 Score=111.67 Aligned_cols=235 Identities=11% Similarity=0.018 Sum_probs=144.6
Q ss_pred CcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEE---EEeCC--CcEEEEEccCCcEEEEEecccccccEEEEEECC
Q psy12614 91 GFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLA---AGTEQ--GHINLFQISDEGLLYEKLLDRQQGRILCTAWHS 165 (708)
Q Consensus 91 ~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la---~~~~d--~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~ 165 (708)
+.|.+.|...+.... +........+-+|||||+.++ +...+ ..|++.++.+++.. .+....+.....+|||
T Consensus 165 ~~l~~~d~dG~~~~~-lt~~~~~~~sP~wSPDG~~~~~~y~S~~~g~~~I~~~~l~~g~~~---~lt~~~g~~~~p~wSP 240 (428)
T PRK01029 165 GELWSVDYDGQNLRP-LTQEHSLSITPTWMHIGSGFPYLYVSYKLGVPKIFLGSLENPAGK---KILALQGNQLMPTFSP 240 (428)
T ss_pred ceEEEEcCCCCCceE-cccCCCCcccceEccCCCceEEEEEEccCCCceEEEEECCCCCce---EeecCCCCccceEECC
Confidence 467778877665443 444456677889999998533 33333 45888899888764 2333344556789999
Q ss_pred CCCEEEEecC-----C-eEEEEEcCCC--ceEEEEEecccCCCCCceeEEEEEEccCCE-EEEE-cCCCc--EEEEeCCC
Q psy12614 166 SGDYLVTGCA-----A-AVRVWDIHKG--HAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITG-DSGGF--VRFWDGKT 233 (708)
Q Consensus 166 d~~~l~~~~~-----d-~i~iwd~~~~--~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~-~~dg~--i~~wd~~~ 233 (708)
||+.|+..+. + .+..|++..+ .....+.... .......+|+|||+ ++.. ..+|. |+++++..
T Consensus 241 DG~~Laf~s~~~g~~di~~~~~~~~~g~~g~~~~lt~~~------~~~~~~p~wSPDG~~Laf~s~~~g~~~ly~~~~~~ 314 (428)
T PRK01029 241 RKKLLAFISDRYGNPDLFIQSFSLETGAIGKPRRLLNEA------FGTQGNPSFSPDGTRLVFVSNKDGRPRIYIMQIDP 314 (428)
T ss_pred CCCEEEEEECCCCCcceeEEEeecccCCCCcceEeecCC------CCCcCCeEECCCCCEEEEEECCCCCceEEEEECcc
Confidence 9999986552 3 4555787653 2223333211 22345679999996 5544 34564 44445532
Q ss_pred -CeeEEEeeccccCeEEEEEeCCCCEEEEEecC---CeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEE
Q psy12614 234 -GVQWSDVKTHKKDILALTVSEDENYLYCAGVD---PTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLA 309 (708)
Q Consensus 234 -~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d---g~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~ 309 (708)
+.....+..+...+....|+|||++|+..+.+ ..|.+||+.+ ++ ...+......+....
T Consensus 315 ~g~~~~~lt~~~~~~~~p~wSPDG~~Laf~~~~~g~~~I~v~dl~~--------g~---------~~~Lt~~~~~~~~p~ 377 (428)
T PRK01029 315 EGQSPRLLTKKYRNSSCPAWSPDGKKIAFCSVIKGVRQICVYDLAT--------GR---------DYQLTTSPENKESPS 377 (428)
T ss_pred cccceEEeccCCCCccceeECCCCCEEEEEEcCCCCcEEEEEECCC--------CC---------eEEccCCCCCccceE
Confidence 23344454455667789999999999876543 4789999988 64 223332233556677
Q ss_pred Ee--CCEEEEEc-C--CCeEEEEeCCCCceeecCccCCCCceEEEEcC
Q psy12614 310 LH--GNRLYSGG-L--DSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKD 352 (708)
Q Consensus 310 ~~--~~~l~s~~-~--d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~ 352 (708)
|+ ++.|+..+ . ...|.++++.++....+..........+|+|-
T Consensus 378 wSpDG~~L~f~~~~~g~~~L~~vdl~~g~~~~Lt~~~g~~~~p~Ws~~ 425 (428)
T PRK01029 378 WAIDSLHLVYSAGNSNESELYLISLITKKTRKIVIGSGEKRFPSWGAF 425 (428)
T ss_pred ECCCCCEEEEEECCCCCceEEEEECCCCCEEEeecCCCcccCceecCC
Confidence 87 66666433 2 35788889888776555533333445555553
|
|
| >TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain | Back alignment and domain information |
|---|
Probab=99.33 E-value=2.7e-08 Score=95.59 Aligned_cols=263 Identities=10% Similarity=0.016 Sum_probs=161.3
Q ss_pred CcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeC----------CCcEEEEEccCCcEEEEEecccc-----c
Q psy12614 91 GFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTE----------QGHINLFQISDEGLLYEKLLDRQ-----Q 155 (708)
Q Consensus 91 ~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~----------d~~i~iwd~~~~~~~~~~~~~~~-----~ 155 (708)
++|.+.|..+++.+..+..-..+- .+ +|||++.|+++.. +..|.+||..+.+.+....+... .
T Consensus 27 ~~v~ViD~~~~~v~g~i~~G~~P~-~~-~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~~~~~i~~p~~p~~~~~ 104 (352)
T TIGR02658 27 TQVYTIDGEAGRVLGMTDGGFLPN-PV-VASDGSFFAHASTVYSRIARGKRTDYVEVIDPQTHLPIADIELPEGPRFLVG 104 (352)
T ss_pred ceEEEEECCCCEEEEEEEccCCCc-ee-ECCCCCEEEEEeccccccccCCCCCEEEEEECccCcEEeEEccCCCchhhcc
Confidence 899999999999988887433322 34 9999998877654 78899999999998743333221 1
Q ss_pred ccEEEEEECCCCCEEEEec-C-C-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEEEEcCCCcEEEEeCC
Q psy12614 156 GRILCTAWHSSGDYLVTGC-A-A-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGK 232 (708)
Q Consensus 156 ~~v~~~~~s~d~~~l~~~~-~-d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~wd~~ 232 (708)
.....++++|||++|+... . + .|.+.|+.+++.+.++..+. +..-+..+ +..+.+.+.||......+.
T Consensus 105 ~~~~~~~ls~dgk~l~V~n~~p~~~V~VvD~~~~kvv~ei~vp~--------~~~vy~t~-e~~~~~~~~Dg~~~~v~~d 175 (352)
T TIGR02658 105 TYPWMTSLTPDNKTLLFYQFSPSPAVGVVDLEGKAFVRMMDVPD--------CYHIFPTA-NDTFFMHCRDGSLAKVGYG 175 (352)
T ss_pred CccceEEECCCCCEEEEecCCCCCEEEEEECCCCcEEEEEeCCC--------CcEEEEec-CCccEEEeecCceEEEEec
Confidence 2334788999999999776 3 4 99999999999999998652 11112222 2222223334433332222
Q ss_pred C-Cee-EEE---eeccccCe-EEEEEeC-CCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEE----ecc
Q psy12614 233 T-GVQ-WSD---VKTHKKDI-LALTVSE-DENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNR----VIH 301 (708)
Q Consensus 233 ~-~~~-~~~---~~~~~~~i-~~~~~s~-~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~----~~~ 301 (708)
+ |+. ... +......+ ..-.|.+ +|+++++... |.|.+.|+.. ........|.....- .-.
T Consensus 176 ~~g~~~~~~~~vf~~~~~~v~~rP~~~~~dg~~~~vs~e-G~V~~id~~~--------~~~~~~~~~~~~~~~~~~~~wr 246 (352)
T TIGR02658 176 TKGNPKIKPTEVFHPEDEYLINHPAYSNKSGRLVWPTYT-GKIFQIDLSS--------GDAKFLPAIEAFTEAEKADGWR 246 (352)
T ss_pred CCCceEEeeeeeecCCccccccCCceEcCCCcEEEEecC-CeEEEEecCC--------CcceecceeeeccccccccccC
Confidence 1 211 111 11100000 0114456 8888877766 9999999765 210011111111000 012
Q ss_pred ccceEEEEEe--CCEEEEEc----------CCCeEEEEeCCCCceeecCccCCCCceEEEEcCCc-EEEEE--cCCeEEE
Q psy12614 302 EGDVKSLALH--GNRLYSGG----------LDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQ-HVLLQ--YTSHLEL 366 (708)
Q Consensus 302 ~~~v~~l~~~--~~~l~s~~----------~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~-~l~~~--~~~~i~i 366 (708)
.+...-++++ ++.++... ..+.|.++|..+.+.............++++||++ ++++. .++.|.+
T Consensus 247 P~g~q~ia~~~dg~~lyV~~~~~~~~thk~~~~~V~ViD~~t~kvi~~i~vG~~~~~iavS~Dgkp~lyvtn~~s~~VsV 326 (352)
T TIGR02658 247 PGGWQQVAYHRARDRIYLLADQRAKWTHKTASRFLFVVDAKTGKRLRKIELGHEIDSINVSQDAKPLLYALSTGDKTLYI 326 (352)
T ss_pred CCcceeEEEcCCCCEEEEEecCCccccccCCCCEEEEEECCCCeEEEEEeCCCceeeEEECCCCCeEEEEeCCCCCcEEE
Confidence 3334457777 66666632 22579999999887544442455667899999999 66654 5678999
Q ss_pred EEecCCC
Q psy12614 367 WSLGSAQ 373 (708)
Q Consensus 367 ~~~~~~~ 373 (708)
+|..+.+
T Consensus 327 iD~~t~k 333 (352)
T TIGR02658 327 FDAETGK 333 (352)
T ss_pred EECcCCe
Confidence 9998865
|
This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome. |
| >PRK01029 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.31 E-value=3.7e-10 Score=114.61 Aligned_cols=229 Identities=13% Similarity=0.077 Sum_probs=144.1
Q ss_pred ceeeeeeeeccCCCCcEEEEEEcCCCCEEE---EEeCCC--cEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEE
Q psy12614 13 TYGVHNIKFYAPEPKVINCIACEPKSSRLA---VSRADQ--SIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLF 85 (708)
Q Consensus 13 ~~~~~~~~~~~~h~~~v~~~~~s~~~~~la---~~~~dg--~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~ 85 (708)
+......+.+......+..-+|||||+.++ +...+| .|.+.++.+++.. .+.... +.....+|+ |+.|+
T Consensus 171 d~dG~~~~~lt~~~~~~~sP~wSPDG~~~~~~y~S~~~g~~~I~~~~l~~g~~~--~lt~~~--g~~~~p~wSPDG~~La 246 (428)
T PRK01029 171 DYDGQNLRPLTQEHSLSITPTWMHIGSGFPYLYVSYKLGVPKIFLGSLENPAGK--KILALQ--GNQLMPTFSPRKKLLA 246 (428)
T ss_pred cCCCCCceEcccCCCCcccceEccCCCceEEEEEEccCCCceEEEEECCCCCce--EeecCC--CCccceEECCCCCEEE
Confidence 333344455555666778889999997533 444443 5777888877653 333334 556678999 77877
Q ss_pred EEcC-----CCcEEEEECCCC---eEeEEEeecCCceEEEEEecCCCEEEEEeC-CCcEEEE--EccC-CcEEEEEeccc
Q psy12614 86 SGGL-----QGFVNEYDMRRL---NIKSSTAVTSGTCWCLSVHKKKRLLAAGTE-QGHINLF--QISD-EGLLYEKLLDR 153 (708)
Q Consensus 86 s~~~-----d~~i~vwd~~~~---~~~~~~~~~~~~v~~~~~s~~~~~la~~~~-d~~i~iw--d~~~-~~~~~~~~~~~ 153 (708)
..+. +-.+..|++..+ +.........+.....+|+|||+.|+..+. +|...+| ++.. +... ..+..
T Consensus 247 f~s~~~g~~di~~~~~~~~~g~~g~~~~lt~~~~~~~~~p~wSPDG~~Laf~s~~~g~~~ly~~~~~~~g~~~--~~lt~ 324 (428)
T PRK01029 247 FISDRYGNPDLFIQSFSLETGAIGKPRRLLNEAFGTQGNPSFSPDGTRLVFVSNKDGRPRIYIMQIDPEGQSP--RLLTK 324 (428)
T ss_pred EEECCCCCcceeEEEeecccCCCCcceEeecCCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECcccccce--EEecc
Confidence 6542 223455777653 333333333344567899999998887663 5654555 4432 2222 33444
Q ss_pred ccccEEEEEECCCCCEEEEecC---C-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EE-EEcC--CCc
Q psy12614 154 QQGRILCTAWHSSGDYLVTGCA---A-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-II-TGDS--GGF 225 (708)
Q Consensus 154 ~~~~v~~~~~s~d~~~l~~~~~---d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~-~~~~--dg~ 225 (708)
+...+....|+|||+.|+..+. . .|.+||+.+++... +... ...+....|+|||+ ++ +... ...
T Consensus 325 ~~~~~~~p~wSPDG~~Laf~~~~~g~~~I~v~dl~~g~~~~-Lt~~-------~~~~~~p~wSpDG~~L~f~~~~~g~~~ 396 (428)
T PRK01029 325 KYRNSSCPAWSPDGKKIAFCSVIKGVRQICVYDLATGRDYQ-LTTS-------PENKESPSWAIDSLHLVYSAGNSNESE 396 (428)
T ss_pred CCCCccceeECCCCCEEEEEEcCCCCcEEEEEECCCCCeEE-ccCC-------CCCccceEECCCCCEEEEEECCCCCce
Confidence 4556778999999999987653 2 69999998887643 3221 23456789999996 44 3332 357
Q ss_pred EEEEeCCCCeeEEEeeccccCeEEEEEeCCC
Q psy12614 226 VRFWDGKTGVQWSDVKTHKKDILALTVSEDE 256 (708)
Q Consensus 226 i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~ 256 (708)
|+++|+..++...... ..+.+...+|+|-.
T Consensus 397 L~~vdl~~g~~~~Lt~-~~g~~~~p~Ws~~~ 426 (428)
T PRK01029 397 LYLISLITKKTRKIVI-GSGEKRFPSWGAFP 426 (428)
T ss_pred EEEEECCCCCEEEeec-CCCcccCceecCCC
Confidence 8899998776544333 44566778888753
|
|
| >KOG1064|consensus | Back alignment and domain information |
|---|
Probab=99.20 E-value=9.2e-11 Score=127.17 Aligned_cols=199 Identities=12% Similarity=0.119 Sum_probs=160.5
Q ss_pred eccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEEC
Q psy12614 21 FYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDM 98 (708)
Q Consensus 21 ~~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~ 98 (708)
.++.|-..|.++.=+|...+-++|+.||.|++|....+..+...-.+.. ..|+.+.|+ |+....+..||.+.+|.+
T Consensus 2203 ~~k~~v~~v~r~~sHp~~~~Yltgs~dgsv~~~~w~~~~~v~~~rt~g~--s~vtr~~f~~qGnk~~i~d~dg~l~l~q~ 2280 (2439)
T KOG1064|consen 2203 MIKHPVENVRRMTSHPSDPYYLTGSQDGSVRMFEWGHGQQVVCFRTAGN--SRVTRSRFNHQGNKFGIVDGDGDLSLWQA 2280 (2439)
T ss_pred EeecccCceeeecCCCCCceEEecCCCceEEEEeccCCCeEEEeeccCc--chhhhhhhcccCCceeeeccCCceeeccc
Confidence 4455667888999999999999999999999999999888764444444 889999999 999999999999999998
Q ss_pred CCCeEeEEEeecCCceEEEEEecCCCEEEEEe---CCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecC
Q psy12614 99 RRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGT---EQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCA 175 (708)
Q Consensus 99 ~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~---~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~ 175 (708)
. .++....+.|......++|-. ..+++++ .++.+.+||..-..... ..-..|.+.++++++.|..+.|++|++
T Consensus 2281 ~-pk~~~s~qchnk~~~Df~Fi~--s~~~tag~s~d~~n~~lwDtl~~~~~s-~v~~~H~~gaT~l~~~P~~qllisggr 2356 (2439)
T KOG1064|consen 2281 S-PKPYTSWQCHNKALSDFRFIG--SLLATAGRSSDNRNVCLWDTLLPPMNS-LVHTCHDGGATVLAYAPKHQLLISGGR 2356 (2439)
T ss_pred C-CcceeccccCCccccceeeee--hhhhccccCCCCCcccchhcccCcccc-eeeeecCCCceEEEEcCcceEEEecCC
Confidence 8 577778888998888888876 5667654 47889999965322111 122789999999999999999999999
Q ss_pred C-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEEEEcCCCcEEEEeCCCCeeEEEee
Q psy12614 176 A-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVK 241 (708)
Q Consensus 176 d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~ 241 (708)
+ .|++||++..+.++.++. +.....+++|+..|.++||++.....+.+++
T Consensus 2357 ~G~v~l~D~rqrql~h~~~~----------------~~~~~~f~~~ss~g~ikIw~~s~~~ll~~~p 2407 (2439)
T KOG1064|consen 2357 KGEVCLFDIRQRQLRHTFQA----------------LDTREYFVTGSSEGNIKIWRLSEFGLLHTFP 2407 (2439)
T ss_pred cCcEEEeehHHHHHHHHhhh----------------hhhhheeeccCcccceEEEEccccchhhcCc
Confidence 9 999999988777666542 2223358999999999999998877777665
|
|
| >PRK11138 outer membrane biogenesis protein BamB; Provisional | Back alignment and domain information |
|---|
Probab=99.17 E-value=1e-07 Score=96.93 Aligned_cols=304 Identities=14% Similarity=0.135 Sum_probs=182.8
Q ss_pred EEeCCEEEEEcCCCcEEEEECCCCeEeEEEeecCC----------ceE-EEEEecCCCEEEEEeCCCcEEEEEccCCcEE
Q psy12614 78 TWFNDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSG----------TCW-CLSVHKKKRLLAAGTEQGHINLFQISDEGLL 146 (708)
Q Consensus 78 ~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~----------~v~-~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~ 146 (708)
++.++.+++++.+|.+.-+|.++|+.+........ .+. .++. ++..+++++.++.+..+|.++|+..
T Consensus 66 vv~~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~v--~~~~v~v~~~~g~l~ald~~tG~~~ 143 (394)
T PRK11138 66 AVAYNKVYAADRAGLVKALDADTGKEIWSVDLSEKDGWFSKNKSALLSGGVTV--AGGKVYIGSEKGQVYALNAEDGEVA 143 (394)
T ss_pred EEECCEEEEECCCCeEEEEECCCCcEeeEEcCCCcccccccccccccccccEE--ECCEEEEEcCCCEEEEEECCCCCCc
Confidence 33488999999999999999999998877653220 000 0111 3556778888999999999999987
Q ss_pred EEEecccccccEE-EEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEEEEcCCC
Q psy12614 147 YEKLLDRQQGRIL-CTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGG 224 (708)
Q Consensus 147 ~~~~~~~~~~~v~-~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg 224 (708)
....+.+ .+. +... .+..++.+..+ .+..+|.++|+.+.+........ . .....+... .++.++.++.+|
T Consensus 144 W~~~~~~---~~~ssP~v--~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~-~-~~~~~sP~v-~~~~v~~~~~~g 215 (394)
T PRK11138 144 WQTKVAG---EALSRPVV--SDGLVLVHTSNGMLQALNESDGAVKWTVNLDVPSL-T-LRGESAPAT-AFGGAIVGGDNG 215 (394)
T ss_pred ccccCCC---ceecCCEE--ECCEEEEECCCCEEEEEEccCCCEeeeecCCCCcc-c-ccCCCCCEE-ECCEEEEEcCCC
Confidence 6554432 121 1112 13456666666 99999999999988876431000 0 000001111 145677888899
Q ss_pred cEEEEeCCCCeeEEEeecccc----C---eEEEEEeC--CCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEe
Q psy12614 225 FVRFWDGKTGVQWSDVKTHKK----D---ILALTVSE--DENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRS 295 (708)
Q Consensus 225 ~i~~wd~~~~~~~~~~~~~~~----~---i~~~~~s~--~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~ 295 (708)
.+..+|..+|+.+........ . ...+..+| .+..++.++.+|.+..+|..+ |+ ..|...
T Consensus 216 ~v~a~d~~~G~~~W~~~~~~~~~~~~~~~~~~~~~sP~v~~~~vy~~~~~g~l~ald~~t--------G~----~~W~~~ 283 (394)
T PRK11138 216 RVSAVLMEQGQLIWQQRISQPTGATEIDRLVDVDTTPVVVGGVVYALAYNGNLVALDLRS--------GQ----IVWKRE 283 (394)
T ss_pred EEEEEEccCChhhheeccccCCCccchhcccccCCCcEEECCEEEEEEcCCeEEEEECCC--------CC----EEEeec
Confidence 999999999887654421100 0 00111122 245777788899999999998 65 334321
Q ss_pred EEEeccccceEEEEEeCCEEEEEcCCCeEEEEeCCCCceeecCccCC--CCceEEEEcCCcEEEEEcCCeEEEEEecCCC
Q psy12614 296 VNRVIHEGDVKSLALHGNRLYSGGLDSYLSLSYYPPKTLVKYPCTLA--QSTPVSLAKDIQHVLLQYTSHLELWSLGSAQ 373 (708)
Q Consensus 296 ~~~~~~~~~v~~l~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~--~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~ 373 (708)
......+...++.++.++.++.+..+|..++...-...... ......+ .++.+++...++.+...|..+++
T Consensus 284 ------~~~~~~~~~~~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~sp~v-~~g~l~v~~~~G~l~~ld~~tG~ 356 (394)
T PRK11138 284 ------YGSVNDFAVDGGRIYLVDQNDRVYALDTRGGVELWSQSDLLHRLLTAPVL-YNGYLVVGDSEGYLHWINREDGR 356 (394)
T ss_pred ------CCCccCcEEECCEEEEEcCCCeEEEEECCCCcEEEcccccCCCcccCCEE-ECCEEEEEeCCCEEEEEECCCCC
Confidence 11222344558888889999999999998876322111111 1111222 36666666788999999988877
Q ss_pred CCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEEEcCCceEEEEE
Q psy12614 374 STDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYSTESCVRLHSL 431 (708)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~d~~i~i~~~ 431 (708)
.+.+.............+ .++++++.+.+|.++.++.
T Consensus 357 --------------------~~~~~~~~~~~~~s~P~~-~~~~l~v~t~~G~l~~~~~ 393 (394)
T PRK11138 357 --------------------FVAQQKVDSSGFLSEPVV-ADDKLLIQARDGTVYAITR 393 (394)
T ss_pred --------------------EEEEEEcCCCcceeCCEE-ECCEEEEEeCCceEEEEeC
Confidence 444443322211122222 2555555566888877653
|
|
| >PRK11138 outer membrane biogenesis protein BamB; Provisional | Back alignment and domain information |
|---|
Probab=99.14 E-value=2.9e-07 Score=93.52 Aligned_cols=310 Identities=13% Similarity=0.084 Sum_probs=185.1
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCCeEEEE-EecCC--C----CCcE-EEEEEeCCEEEEEcCCCcEEEEECCCCeEeEEEe
Q psy12614 37 KSSRLAVSRADQSIEIWDISETPHVDRV-FIGDP--L----SNSI-ECLTWFNDRLFSGGLQGFVNEYDMRRLNIKSSTA 108 (708)
Q Consensus 37 ~~~~la~~~~dg~v~iwd~~~~~~~~~~-~~~h~--~----~~~v-~~l~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~ 108 (708)
.+..+.+++.+|.|.-+|..+|+.+=+. +.+.. . ...+ ..++..++.++.++.+|.+..+|.++|+.+....
T Consensus 68 ~~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~v~~~~v~v~~~~g~l~ald~~tG~~~W~~~ 147 (394)
T PRK11138 68 AYNKVYAADRAGLVKALDADTGKEIWSVDLSEKDGWFSKNKSALLSGGVTVAGGKVYIGSEKGQVYALNAEDGEVAWQTK 147 (394)
T ss_pred ECCEEEEECCCCeEEEEECCCCcEeeEEcCCCcccccccccccccccccEEECCEEEEEcCCCEEEEEECCCCCCccccc
Confidence 3567788888899999999998875322 11100 0 0011 1234447888889999999999999999888776
Q ss_pred ecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccc---cEEEEEECCCCCEEEEecCC-eEEEEEcC
Q psy12614 109 VTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQG---RILCTAWHSSGDYLVTGCAA-AVRVWDIH 184 (708)
Q Consensus 109 ~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~---~v~~~~~s~d~~~l~~~~~d-~i~iwd~~ 184 (708)
.......+... .+..+++++.++.+..+|.++|+............ ...+... .+..++.++.+ .+..+|..
T Consensus 148 ~~~~~~ssP~v--~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~sP~v--~~~~v~~~~~~g~v~a~d~~ 223 (394)
T PRK11138 148 VAGEALSRPVV--SDGLVLVHTSNGMLQALNESDGAVKWTVNLDVPSLTLRGESAPAT--AFGGAIVGGDNGRVSAVLME 223 (394)
T ss_pred CCCceecCCEE--ECCEEEEECCCCEEEEEEccCCCEeeeecCCCCcccccCCCCCEE--ECCEEEEEcCCCEEEEEEcc
Confidence 44322212222 23466777889999999999999886544321100 0011111 12345566666 89999999
Q ss_pred CCceEEEEEecccCCCCCceeEEEEEEcc---CCEEEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEE
Q psy12614 185 KGHAIHKMSLDKSSKFSKNTAVWCVAFCA---DFTIITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYC 261 (708)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~ 261 (708)
+|+.+.+.................+..+| ++.+++++.+|.+..+|..+|+.+-.... .....+. .++..++.
T Consensus 224 ~G~~~W~~~~~~~~~~~~~~~~~~~~~sP~v~~~~vy~~~~~g~l~ald~~tG~~~W~~~~--~~~~~~~--~~~~~vy~ 299 (394)
T PRK11138 224 QGQLIWQQRISQPTGATEIDRLVDVDTTPVVVGGVVYALAYNGNLVALDLRSGQIVWKREY--GSVNDFA--VDGGRIYL 299 (394)
T ss_pred CChhhheeccccCCCccchhcccccCCCcEEECCEEEEEEcCCeEEEEECCCCCEEEeecC--CCccCcE--EECCEEEE
Confidence 99887665432100000000011111122 56777888899999999999987655432 1111222 24567888
Q ss_pred EecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEeCCEEEEEcCCCeEEEEeCCCCceeecCcc-
Q psy12614 262 AGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALHGNRLYSGGLDSYLSLSYYPPKTLVKYPCT- 340 (708)
Q Consensus 262 ~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~- 340 (708)
++.+|.+..+|..+ |+ ..|.... + . .....+....++.++.++.+|.+...|..++++......
T Consensus 300 ~~~~g~l~ald~~t--------G~----~~W~~~~-~-~-~~~~~sp~v~~g~l~v~~~~G~l~~ld~~tG~~~~~~~~~ 364 (394)
T PRK11138 300 VDQNDRVYALDTRG--------GV----ELWSQSD-L-L-HRLLTAPVLYNGYLVVGDSEGYLHWINREDGRFVAQQKVD 364 (394)
T ss_pred EcCCCeEEEEECCC--------Cc----EEEcccc-c-C-CCcccCCEEECCEEEEEeCCCEEEEEECCCCCEEEEEEcC
Confidence 88999999999988 64 2332110 0 0 111223334478899999999999999988774322201
Q ss_pred CCCCceEEEEcCCcEEEEEcCCeEEEEEe
Q psy12614 341 LAQSTPVSLAKDIQHVLLQYTSHLELWSL 369 (708)
Q Consensus 341 ~~~~~~~~~s~~~~~l~~~~~~~i~i~~~ 369 (708)
......--.-.++++++...++.+..++.
T Consensus 365 ~~~~~s~P~~~~~~l~v~t~~G~l~~~~~ 393 (394)
T PRK11138 365 SSGFLSEPVVADDKLLIQARDGTVYAITR 393 (394)
T ss_pred CCcceeCCEEECCEEEEEeCCceEEEEeC
Confidence 11111111124667777778888877654
|
|
| >KOG0280|consensus | Back alignment and domain information |
|---|
Probab=99.13 E-value=7.8e-09 Score=91.47 Aligned_cols=239 Identities=13% Similarity=0.199 Sum_probs=158.9
Q ss_pred CcEEEEEEcC---CCC-EEEEEeCCCcEEEEeCCCCCeEEEEEecCC---CCCc-EEEEEEe--CCEEEEEcCCCcEEEE
Q psy12614 27 KVINCIACEP---KSS-RLAVSRADQSIEIWDISETPHVDRVFIGDP---LSNS-IECLTWF--NDRLFSGGLQGFVNEY 96 (708)
Q Consensus 27 ~~v~~~~~s~---~~~-~la~~~~dg~v~iwd~~~~~~~~~~~~~h~---~~~~-v~~l~~~--~~~l~s~~~d~~i~vw 96 (708)
+.+..+.|+. +|. .|+-+..+|.|.++......... .|.+-. +... -.++.|+ +..++++..+|.+.+-
T Consensus 70 s~~~dm~w~~~~~~g~~~l~~a~a~G~i~~~r~~~~~ss~-~L~~ls~~ki~~~~~lslD~~~~~~~i~vs~s~G~~~~v 148 (339)
T KOG0280|consen 70 STEFDMLWRIRETDGDFNLLDAHARGQIQLYRNDEDESSV-HLRGLSSKKISVVEALSLDISTSGTKIFVSDSRGSISGV 148 (339)
T ss_pred cccceeeeeeccCCccceeeeccccceEEEEeeccceeee-eecccchhhhhheeeeEEEeeccCceEEEEcCCCcEEEE
Confidence 3455555542 444 45666778889888876543332 343322 1111 3455666 8889999999999977
Q ss_pred ECCCCeEeE--EEeecCCceEEEEEecC-CCEEEEEeCCCcEEEEEcc-CCcEEEEEecccccccEEEEEECC-CCCEEE
Q psy12614 97 DMRRLNIKS--STAVTSGTCWCLSVHKK-KRLLAAGTEQGHINLFQIS-DEGLLYEKLLDRQQGRILCTAWHS-SGDYLV 171 (708)
Q Consensus 97 d~~~~~~~~--~~~~~~~~v~~~~~s~~-~~~la~~~~d~~i~iwd~~-~~~~~~~~~~~~~~~~v~~~~~s~-d~~~l~ 171 (708)
+........ ..+.|.-..+...|+.. .+.+.+|++|+.+..||++ .++.++ .....|...|.++.-+| ++.+|+
T Consensus 149 ~~t~~~le~vq~wk~He~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~~~i~-~n~kvH~~GV~SI~ss~~~~~~I~ 227 (339)
T KOG0280|consen 149 YETEMVLEKVQTWKVHEFEAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIPKTFIW-HNSKVHTSGVVSIYSSPPKPTYIA 227 (339)
T ss_pred ecceeeeeecccccccceeeeeeecccCCCceEEecCCCceEEEEEecCCcceee-ecceeeecceEEEecCCCCCceEE
Confidence 766665544 88999999999999874 4578899999999999999 444443 33556788899988775 578999
Q ss_pred EecCC-eEEEEEcCC-CceEEEEEecccCCCCCceeEEEEEEccCC--EEEEEcCCCcEEEEeCCCC--e---eEEEeec
Q psy12614 172 TGCAA-AVRVWDIHK-GHAIHKMSLDKSSKFSKNTAVWCVAFCADF--TIITGDSGGFVRFWDGKTG--V---QWSDVKT 242 (708)
Q Consensus 172 ~~~~d-~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~l~~~~~dg~i~~wd~~~~--~---~~~~~~~ 242 (708)
+|+.| .|++||.++ ++++..-.. .+.|+.+.++|.- +++.+..-.-.++.+.+.+ + .....+.
T Consensus 228 TGsYDe~i~~~DtRnm~kPl~~~~v--------~GGVWRi~~~p~~~~~lL~~CMh~G~ki~~~~~~~~e~~~~~~s~~~ 299 (339)
T KOG0280|consen 228 TGSYDECIRVLDTRNMGKPLFKAKV--------GGGVWRIKHHPEIFHRLLAACMHNGAKILDSSDKVLEFQIVLPSDKI 299 (339)
T ss_pred EeccccceeeeehhcccCccccCcc--------ccceEEEEecchhhhHHHHHHHhcCceEEEecccccchheeeecccc
Confidence 99999 999999884 555554433 6889999999965 3444444444666666543 2 2333455
Q ss_pred cccCeEEEEEeCCCCEEEEEe-cCCeEE-EEEccC
Q psy12614 243 HKKDILALTVSEDENYLYCAG-VDPTVV-CFQRTR 275 (708)
Q Consensus 243 ~~~~i~~~~~s~~~~~l~~~~-~dg~i~-iw~~~~ 275 (708)
|.+-...-.|......|++++ .|+.++ +|-..+
T Consensus 300 hdSl~YG~DWd~~~~~lATCsFYDk~~~~~Wl~~t 334 (339)
T KOG0280|consen 300 HDSLCYGGDWDSKDSFLATCSFYDKKIRQLWLHIT 334 (339)
T ss_pred ccceeeccccccccceeeeeeccccceeeeeeecc
Confidence 655555555544335677654 466644 665544
|
|
| >KOG4190|consensus | Back alignment and domain information |
|---|
Probab=99.11 E-value=3.9e-10 Score=107.92 Aligned_cols=252 Identities=13% Similarity=0.170 Sum_probs=169.7
Q ss_pred ccceeeeeee--eccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCC-C-----eEEEEEecCCCCCcEEEEEEeCC
Q psy12614 11 MGTYGVHNIK--FYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISET-P-----HVDRVFIGDPLSNSIECLTWFND 82 (708)
Q Consensus 11 ~~~~~~~~~~--~~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~-~-----~~~~~~~~h~~~~~v~~l~~~~~ 82 (708)
.+.+.+..+| -|.||...|..++--.+.+-+++++.|.+|++|.+... . ..+-+++.|+ .+|..+.|..+
T Consensus 718 t~~ln~~~irL~nf~GH~~~iRai~AidNENSFiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aHk--k~i~~igfL~~ 795 (1034)
T KOG4190|consen 718 TDNLNFDHIRLCNFTGHQEKIRAIAAIDNENSFISASKDKTVKLWSIKPEGDEIGTSACQFTYQAHK--KPIHDIGFLAD 795 (1034)
T ss_pred CcccccceeeeecccCcHHHhHHHHhcccccceeeccCCceEEEEEeccccCccccceeeeEhhhcc--Ccccceeeeec
Confidence 3444554444 48899999999988778888999999999999999751 1 1223788999 99999999933
Q ss_pred EEEEEcCCCcEEEEECCCCeEeEEEe--ecCCceEEEEEec--CCCEEEEE-eCCCcEEEEEccCCcEEEEEec---ccc
Q psy12614 83 RLFSGGLQGFVNEYDMRRLNIKSSTA--VTSGTCWCLSVHK--KKRLLAAG-TEQGHINLFQISDEGLLYEKLL---DRQ 154 (708)
Q Consensus 83 ~l~s~~~d~~i~vwd~~~~~~~~~~~--~~~~~v~~~~~s~--~~~~la~~-~~d~~i~iwd~~~~~~~~~~~~---~~~ 154 (708)
.-..++.||.|.+||.--++++.... ...+.+..+..-| +...+.+| +...+|+++|.+.++....... .+.
T Consensus 796 lr~i~ScD~giHlWDPFigr~Laq~~dapk~~a~~~ikcl~nv~~~iliAgcsaeSTVKl~DaRsce~~~E~kVcna~~P 875 (1034)
T KOG4190|consen 796 LRSIASCDGGIHLWDPFIGRLLAQMEDAPKEGAGGNIKCLENVDRHILIAGCSAESTVKLFDARSCEWTCELKVCNAPGP 875 (1034)
T ss_pred cceeeeccCcceeecccccchhHhhhcCcccCCCceeEecccCcchheeeeccchhhheeeecccccceeeEEeccCCCC
Confidence 33334558999999988887765433 1223333333333 34444444 6789999999998877633332 234
Q ss_pred cccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEEEEcCCCcEEE-EeCC
Q psy12614 155 QGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRF-WDGK 232 (708)
Q Consensus 155 ~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~-wd~~ 232 (708)
.+-+.+++..+.|+.++.+-.+ .|.+.|.++|+.+.....- +.....++--.|.-++....|.++.+ |-.-
T Consensus 876 na~~R~iaVa~~GN~lAa~LSnGci~~LDaR~G~vINswrpm-------ecdllqlaapsdq~L~~saldHslaVnWhal 948 (1034)
T KOG4190|consen 876 NALTRAIAVADKGNKLAAALSNGCIAILDARNGKVINSWRPM-------ECDLLQLAAPSDQALAQSALDHSLAVNWHAL 948 (1034)
T ss_pred chheeEEEeccCcchhhHHhcCCcEEEEecCCCceeccCCcc-------cchhhhhcCchhHHHHhhcccceeEeeehhc
Confidence 4678999999999999998888 9999999999988766532 33333444333333677777888888 8877
Q ss_pred CCeeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEc
Q psy12614 233 TGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQR 273 (708)
Q Consensus 233 ~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~ 273 (708)
+|......+....+..-+ ..-|..|+++.....+.+|.-
T Consensus 949 dgimh~q~kpppepahfl--qsvgpSLV~a~~Gn~lgVYad 987 (1034)
T KOG4190|consen 949 DGIMHLQDKPPPEPAHFL--QSVGPSLVTAQNGNILGVYAD 987 (1034)
T ss_pred CCeeeeccCCCCcchhhh--hccCceeEEeccCcEEEEEec
Confidence 776655544322222111 123456777776667777754
|
|
| >KOG4190|consensus | Back alignment and domain information |
|---|
Probab=99.11 E-value=5e-10 Score=107.21 Aligned_cols=208 Identities=13% Similarity=0.125 Sum_probs=152.2
Q ss_pred eEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCC-----cEEEEEecccccccEEEEEECCCCCEEEEecCCeE
Q psy12614 104 KSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDE-----GLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAAAV 178 (708)
Q Consensus 104 ~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~-----~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~i 178 (708)
+..+.+|...|++++--.+.+.+++++.|.+|++|.++.. .-....++..|..+|.++.|-.+.++++++.. .|
T Consensus 728 L~nf~GH~~~iRai~AidNENSFiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aHkk~i~~igfL~~lr~i~ScD~-gi 806 (1034)
T KOG4190|consen 728 LCNFTGHQEKIRAIAAIDNENSFISASKDKTVKLWSIKPEGDEIGTSACQFTYQAHKKPIHDIGFLADLRSIASCDG-GI 806 (1034)
T ss_pred eecccCcHHHhHHHHhcccccceeeccCCceEEEEEeccccCccccceeeeEhhhccCcccceeeeeccceeeeccC-cc
Confidence 4567799999999988888888999999999999998732 11123678899999999999999888876533 79
Q ss_pred EEEEcCCCceEEEEEecccCCCCCceeEEEEEEccC--CE-EEEE-cCCCcEEEEeCCCCeeEEEe-----eccccCeEE
Q psy12614 179 RVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCAD--FT-IITG-DSGGFVRFWDGKTGVQWSDV-----KTHKKDILA 249 (708)
Q Consensus 179 ~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~-l~~~-~~dg~i~~wd~~~~~~~~~~-----~~~~~~i~~ 249 (708)
.+||.--|+.+..+... ...+.+..+...++ .. +++| +...+|+++|.+.++....+ .+.++-+.+
T Consensus 807 HlWDPFigr~Laq~~da-----pk~~a~~~ikcl~nv~~~iliAgcsaeSTVKl~DaRsce~~~E~kVcna~~Pna~~R~ 881 (1034)
T KOG4190|consen 807 HLWDPFIGRLLAQMEDA-----PKEGAGGNIKCLENVDRHILIAGCSAESTVKLFDARSCEWTCELKVCNAPGPNALTRA 881 (1034)
T ss_pred eeecccccchhHhhhcC-----cccCCCceeEecccCcchheeeeccchhhheeeecccccceeeEEeccCCCCchheeE
Confidence 99999888877655433 11344444444444 23 3444 67889999999988765554 345577899
Q ss_pred EEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe-CCEEEEEcCCCeEEE-E
Q psy12614 250 LTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH-GNRLYSGGLDSYLSL-S 327 (708)
Q Consensus 250 ~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~-~~~l~s~~~d~~i~i-w 327 (708)
++..+.|++++.+-.+|.|.+.|.++ |+ .+...+...-....++.. ++.|+....|.++.+ |
T Consensus 882 iaVa~~GN~lAa~LSnGci~~LDaR~--------G~--------vINswrpmecdllqlaapsdq~L~~saldHslaVnW 945 (1034)
T KOG4190|consen 882 IAVADKGNKLAAALSNGCIAILDARN--------GK--------VINSWRPMECDLLQLAAPSDQALAQSALDHSLAVNW 945 (1034)
T ss_pred EEeccCcchhhHHhcCCcEEEEecCC--------Cc--------eeccCCcccchhhhhcCchhHHHHhhcccceeEeee
Confidence 99999999999999999999999999 76 333344444444445444 667777777888887 7
Q ss_pred eCCCCc
Q psy12614 328 YYPPKT 333 (708)
Q Consensus 328 ~~~~~~ 333 (708)
-.-.+.
T Consensus 946 haldgi 951 (1034)
T KOG4190|consen 946 HALDGI 951 (1034)
T ss_pred hhcCCe
Confidence 655443
|
|
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.10 E-value=9.1e-08 Score=107.48 Aligned_cols=243 Identities=12% Similarity=0.061 Sum_probs=155.5
Q ss_pred EEEEEcCC-CCEEEEEeCCCcEEEEeCCCCCeEEEEEec-CC-----------CCCcEEEEEEe--CCEEEEEc-CCCcE
Q psy12614 30 NCIACEPK-SSRLAVSRADQSIEIWDISETPHVDRVFIG-DP-----------LSNSIECLTWF--NDRLFSGG-LQGFV 93 (708)
Q Consensus 30 ~~~~~s~~-~~~la~~~~dg~v~iwd~~~~~~~~~~~~~-h~-----------~~~~v~~l~~~--~~~l~s~~-~d~~i 93 (708)
..++++++ +++.++-+.++.|.+||... ..+. .+.+ .. .-.....|++. ++.|+++. ..+.|
T Consensus 571 ~gvavd~~~g~lyVaDs~n~rI~v~d~~G-~~i~-~ig~~g~~G~~dG~~~~a~f~~P~GIavd~~gn~LYVaDt~n~~I 648 (1057)
T PLN02919 571 GKLAIDLLNNRLFISDSNHNRIVVTDLDG-NFIV-QIGSTGEEGLRDGSFEDATFNRPQGLAYNAKKNLLYVADTENHAL 648 (1057)
T ss_pred ceEEEECCCCeEEEEECCCCeEEEEeCCC-CEEE-EEccCCCcCCCCCchhccccCCCcEEEEeCCCCEEEEEeCCCceE
Confidence 46788875 55566666788999999864 4333 2322 11 00235788888 66666654 45789
Q ss_pred EEEECCCCeEeEEEeec-----------------CCceEEEEEec-CCCEEEEEeCCCcEEEEEccCCcEEEEE------
Q psy12614 94 NEYDMRRLNIKSSTAVT-----------------SGTCWCLSVHK-KKRLLAAGTEQGHINLFQISDEGLLYEK------ 149 (708)
Q Consensus 94 ~vwd~~~~~~~~~~~~~-----------------~~~v~~~~~s~-~~~~la~~~~d~~i~iwd~~~~~~~~~~------ 149 (708)
+++|+.++. +.++.+. -...+.++|+| ++..+++.+.++.|++||..++......
T Consensus 649 r~id~~~~~-V~tlag~G~~g~~~~gg~~~~~~~ln~P~gVa~dp~~g~LyVad~~~~~I~v~d~~~g~v~~~~G~G~~~ 727 (1057)
T PLN02919 649 REIDFVNET-VRTLAGNGTKGSDYQGGKKGTSQVLNSPWDVCFEPVNEKVYIAMAGQHQIWEYNISDGVTRVFSGDGYER 727 (1057)
T ss_pred EEEecCCCE-EEEEeccCcccCCCCCChhhhHhhcCCCeEEEEecCCCeEEEEECCCCeEEEEECCCCeEEEEecCCccc
Confidence 999988765 3333211 12346799999 4556666677899999999877653100
Q ss_pred ecccc------cccEEEEEECCCCCEEEEec-CC-eEEEEEcCCCceEEEEEec----c-cCCCC---------CceeEE
Q psy12614 150 LLDRQ------QGRILCTAWHSSGDYLVTGC-AA-AVRVWDIHKGHAIHKMSLD----K-SSKFS---------KNTAVW 207 (708)
Q Consensus 150 ~~~~~------~~~v~~~~~s~d~~~l~~~~-~d-~i~iwd~~~~~~~~~~~~~----~-~~~~~---------~~~~v~ 207 (708)
...++ -.....++++|+++.|+++. .+ .|++||+.++......... . ...|+ .-....
T Consensus 728 ~~~g~~~~~~~~~~P~GIavspdG~~LYVADs~n~~Irv~D~~tg~~~~~~gg~~~~~~~l~~fG~~dG~g~~~~l~~P~ 807 (1057)
T PLN02919 728 NLNGSSGTSTSFAQPSGISLSPDLKELYIADSESSSIRALDLKTGGSRLLAGGDPTFSDNLFKFGDHDGVGSEVLLQHPL 807 (1057)
T ss_pred cCCCCccccccccCccEEEEeCCCCEEEEEECCCCeEEEEECCCCcEEEEEecccccCcccccccCCCCchhhhhccCCc
Confidence 00011 12356799999998666554 44 9999999876542111000 0 00000 011346
Q ss_pred EEEEccCCE-EEEEcCCCcEEEEeCCCCeeEEEee-------------ccccCeEEEEEeCCCCEEEEEecCCeEEEEEc
Q psy12614 208 CVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDVK-------------THKKDILALTVSEDENYLYCAGVDPTVVCFQR 273 (708)
Q Consensus 208 ~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~~-------------~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~ 273 (708)
.++++++|. +++-..++.|++||..++....... +.-.....++++++|+.+++-+.++.|++||+
T Consensus 808 Gvavd~dG~LYVADs~N~rIrviD~~tg~v~tiaG~G~~G~~dG~~~~a~l~~P~GIavd~dG~lyVaDt~Nn~Irvid~ 887 (1057)
T PLN02919 808 GVLCAKDGQIYVADSYNHKIKKLDPATKRVTTLAGTGKAGFKDGKALKAQLSEPAGLALGENGRLFVADTNNSLIRYLDL 887 (1057)
T ss_pred eeeEeCCCcEEEEECCCCEEEEEECCCCeEEEEeccCCcCCCCCcccccccCCceEEEEeCCCCEEEEECCCCEEEEEEC
Confidence 889999997 6667778999999998776543321 11225678999999998888888999999999
Q ss_pred cC
Q psy12614 274 TR 275 (708)
Q Consensus 274 ~~ 275 (708)
.+
T Consensus 888 ~~ 889 (1057)
T PLN02919 888 NK 889 (1057)
T ss_pred CC
Confidence 88
|
|
| >KOG0280|consensus | Back alignment and domain information |
|---|
Probab=99.09 E-value=9.8e-08 Score=84.70 Aligned_cols=221 Identities=12% Similarity=0.126 Sum_probs=156.1
Q ss_pred CCcEEEEeCCCCCeEE-EEEecCCCCCcEEEEEEe-----CC-EEEEEcCCCcEEEEECCCCeEeEEEeecC------Cc
Q psy12614 47 DQSIEIWDISETPHVD-RVFIGDPLSNSIECLTWF-----ND-RLFSGGLQGFVNEYDMRRLNIKSSTAVTS------GT 113 (708)
Q Consensus 47 dg~v~iwd~~~~~~~~-~~~~~h~~~~~v~~l~~~-----~~-~l~s~~~d~~i~vwd~~~~~~~~~~~~~~------~~ 113 (708)
.|.+.+|++...+... .+++... ...+..+.|. |. .|+-+...|.|.++..........+++-. ..
T Consensus 45 ~Gkl~Lys~~d~~~~~l~~~q~~d-ts~~~dm~w~~~~~~g~~~l~~a~a~G~i~~~r~~~~~ss~~L~~ls~~ki~~~~ 123 (339)
T KOG0280|consen 45 SGKLHLYSLEDMKLSPLDTLQCTD-TSTEFDMLWRIRETDGDFNLLDAHARGQIQLYRNDEDESSVHLRGLSSKKISVVE 123 (339)
T ss_pred ccceEEEeecccccCccceeeeec-ccccceeeeeeccCCccceeeeccccceEEEEeeccceeeeeecccchhhhhhee
Confidence 4779999998754332 1222111 2578888888 55 56777889999999877765555544322 12
Q ss_pred eEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCC-CEEEEecCC-eEEEEEcC-CCceEE
Q psy12614 114 CWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSG-DYLVTGCAA-AVRVWDIH-KGHAIH 190 (708)
Q Consensus 114 v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~-~~l~~~~~d-~i~iwd~~-~~~~~~ 190 (708)
..++.|++.+..++++-.+|.+.+-+.....+...+..+.|+-......|+... +.+.+|+.| .+..||++ .++.+.
T Consensus 124 ~lslD~~~~~~~i~vs~s~G~~~~v~~t~~~le~vq~wk~He~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~~~i~ 203 (339)
T KOG0280|consen 124 ALSLDISTSGTKIFVSDSRGSISGVYETEMVLEKVQTWKVHEFEAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIPKTFIW 203 (339)
T ss_pred eeEEEeeccCceEEEEcCCCcEEEEecceeeeeecccccccceeeeeeecccCCCceEEecCCCceEEEEEecCCcceee
Confidence 457889999999999999999997776666666556889999999999997544 677889999 99999998 333333
Q ss_pred EEEecccCCCCCceeEEEEEEccCC--EEEEEcCCCcEEEEeCCC-CeeEEEeeccccCeEEEEEeCCCC-EEEEEecCC
Q psy12614 191 KMSLDKSSKFSKNTAVWCVAFCADF--TIITGDSGGFVRFWDGKT-GVQWSDVKTHKKDILALTVSEDEN-YLYCAGVDP 266 (708)
Q Consensus 191 ~~~~~~~~~~~~~~~v~~~~~~~~~--~l~~~~~dg~i~~wd~~~-~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~~dg 266 (708)
.-.. .|...|.++.-+|.. .+++|+.|-.|++||.++ ++++..-+ -.+.|..+..+|.-. .++.++.-+
T Consensus 204 ~n~k------vH~~GV~SI~ss~~~~~~I~TGsYDe~i~~~DtRnm~kPl~~~~-v~GGVWRi~~~p~~~~~lL~~CMh~ 276 (339)
T KOG0280|consen 204 HNSK------VHTSGVVSIYSSPPKPTYIATGSYDECIRVLDTRNMGKPLFKAK-VGGGVWRIKHHPEIFHRLLAACMHN 276 (339)
T ss_pred ecce------eeecceEEEecCCCCCceEEEeccccceeeeehhcccCccccCc-cccceEEEEecchhhhHHHHHHHhc
Confidence 3221 237788898888754 399999999999999984 55555443 458899999988642 333444445
Q ss_pred eEEEEEccC
Q psy12614 267 TVVCFQRTR 275 (708)
Q Consensus 267 ~i~iw~~~~ 275 (708)
-.++-+.+.
T Consensus 277 G~ki~~~~~ 285 (339)
T KOG0280|consen 277 GAKILDSSD 285 (339)
T ss_pred CceEEEecc
Confidence 567777665
|
|
| >PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species | Back alignment and domain information |
|---|
Probab=99.09 E-value=5.5e-07 Score=85.00 Aligned_cols=217 Identities=12% Similarity=0.067 Sum_probs=145.0
Q ss_pred EEEEcC-CCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECCCCeEeEEE
Q psy12614 31 CIACEP-KSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMRRLNIKSST 107 (708)
Q Consensus 31 ~~~~s~-~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~~~~~~~ 107 (708)
+.+|.+ ++.++++--..+.|..|+..++.... +.. . . ...+++. ++.|+.+...+. .++|..+++.....
T Consensus 4 gp~~d~~~g~l~~~D~~~~~i~~~~~~~~~~~~--~~~-~--~-~~G~~~~~~~g~l~v~~~~~~-~~~d~~~g~~~~~~ 76 (246)
T PF08450_consen 4 GPVWDPRDGRLYWVDIPGGRIYRVDPDTGEVEV--IDL-P--G-PNGMAFDRPDGRLYVADSGGI-AVVDPDTGKVTVLA 76 (246)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTTTEEEE--EES-S--S-EEEEEEECTTSEEEEEETTCE-EEEETTTTEEEEEE
T ss_pred ceEEECCCCEEEEEEcCCCEEEEEECCCCeEEE--Eec-C--C-CceEEEEccCCEEEEEEcCce-EEEecCCCcEEEEe
Confidence 578888 67777776678999999999876532 221 1 3 6677777 677777766554 55599998655444
Q ss_pred ee-----cCCceEEEEEecCCCEEEEEeCC--------CcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEe-
Q psy12614 108 AV-----TSGTCWCLSVHKKKRLLAAGTEQ--------GHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTG- 173 (708)
Q Consensus 108 ~~-----~~~~v~~~~~s~~~~~la~~~~d--------~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~- 173 (708)
.. .....+.+++.|+|++.++.... |.|..++.. ++.. .....-.....++|+||++.|+.+
T Consensus 77 ~~~~~~~~~~~~ND~~vd~~G~ly~t~~~~~~~~~~~~g~v~~~~~~-~~~~---~~~~~~~~pNGi~~s~dg~~lyv~d 152 (246)
T PF08450_consen 77 DLPDGGVPFNRPNDVAVDPDGNLYVTDSGGGGASGIDPGSVYRIDPD-GKVT---VVADGLGFPNGIAFSPDGKTLYVAD 152 (246)
T ss_dssp EEETTCSCTEEEEEEEE-TTS-EEEEEECCBCTTCGGSEEEEEEETT-SEEE---EEEEEESSEEEEEEETTSSEEEEEE
T ss_pred eccCCCcccCCCceEEEcCCCCEEEEecCCCccccccccceEEECCC-CeEE---EEecCcccccceEECCcchheeecc
Confidence 43 34578899999999977765443 457777766 4543 222234557899999999988755
Q ss_pred cCC-eEEEEEcCCCce-E---EEEEecccCCCCCceeEEEEEEccCCEE-EEEcCCCcEEEEeCCCCeeEEEeeccccCe
Q psy12614 174 CAA-AVRVWDIHKGHA-I---HKMSLDKSSKFSKNTAVWCVAFCADFTI-ITGDSGGFVRFWDGKTGVQWSDVKTHKKDI 247 (708)
Q Consensus 174 ~~d-~i~iwd~~~~~~-~---~~~~~~~~~~~~~~~~v~~~~~~~~~~l-~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i 247 (708)
+.. .|..+++..... + ..+.... ......-.+++..+|++ ++....+.|.++|.+ |+.+..+......+
T Consensus 153 s~~~~i~~~~~~~~~~~~~~~~~~~~~~----~~~g~pDG~~vD~~G~l~va~~~~~~I~~~~p~-G~~~~~i~~p~~~~ 227 (246)
T PF08450_consen 153 SFNGRIWRFDLDADGGELSNRRVFIDFP----GGPGYPDGLAVDSDGNLWVADWGGGRIVVFDPD-GKLLREIELPVPRP 227 (246)
T ss_dssp TTTTEEEEEEEETTTCCEEEEEEEEE-S----SSSCEEEEEEEBTTS-EEEEEETTTEEEEEETT-SCEEEEEE-SSSSE
T ss_pred cccceeEEEeccccccceeeeeeEEEcC----CCCcCCCcceEcCCCCEEEEEcCCCEEEEECCC-ccEEEEEcCCCCCE
Confidence 444 899999864322 2 1121111 11235788999999984 455568899999976 99888887666789
Q ss_pred EEEEEe-CCCCEEEEEe
Q psy12614 248 LALTVS-EDENYLYCAG 263 (708)
Q Consensus 248 ~~~~~s-~~~~~l~~~~ 263 (708)
++++|. ++.+.|+..+
T Consensus 228 t~~~fgg~~~~~L~vTt 244 (246)
T PF08450_consen 228 TNCAFGGPDGKTLYVTT 244 (246)
T ss_dssp EEEEEESTTSSEEEEEE
T ss_pred EEEEEECCCCCEEEEEe
Confidence 999994 6767776654
|
These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A .... |
| >KOG1064|consensus | Back alignment and domain information |
|---|
Probab=99.08 E-value=7.8e-10 Score=120.27 Aligned_cols=183 Identities=11% Similarity=0.155 Sum_probs=144.3
Q ss_pred CcEEEEEEe--CCEEEEEcCCCcEEEEECCCCeEeEEEe-ecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEE
Q psy12614 72 NSIECLTWF--NDRLFSGGLQGFVNEYDMRRLNIKSSTA-VTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYE 148 (708)
Q Consensus 72 ~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~~~~~~~~-~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~ 148 (708)
..|.++.-+ ..+.++|+.||.+++|....+..+..++ .-...|+.+.|+.+|+.+..+..||.+.+|.+...-.
T Consensus 2209 ~~v~r~~sHp~~~~Yltgs~dgsv~~~~w~~~~~v~~~rt~g~s~vtr~~f~~qGnk~~i~d~dg~l~l~q~~pk~~--- 2285 (2439)
T KOG1064|consen 2209 ENVRRMTSHPSDPYYLTGSQDGSVRMFEWGHGQQVVCFRTAGNSRVTRSRFNHQGNKFGIVDGDGDLSLWQASPKPY--- 2285 (2439)
T ss_pred CceeeecCCCCCceEEecCCCceEEEEeccCCCeEEEeeccCcchhhhhhhcccCCceeeeccCCceeecccCCcce---
Confidence 455555555 6788999999999999999998887766 2237899999999999999999999999999883322
Q ss_pred EecccccccEEEEEECCCCCEEEEecC---C-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCC
Q psy12614 149 KLLDRQQGRILCTAWHSSGDYLVTGCA---A-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSG 223 (708)
Q Consensus 149 ~~~~~~~~~v~~~~~s~d~~~l~~~~~---d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~d 223 (708)
.....|......+.|-. ..+++++. + .+.+||..-.....-+.. -|...++++++.|..+ +++|+.+
T Consensus 2286 ~s~qchnk~~~Df~Fi~--s~~~tag~s~d~~n~~lwDtl~~~~~s~v~~------~H~~gaT~l~~~P~~qllisggr~ 2357 (2439)
T KOG1064|consen 2286 TSWQCHNKALSDFRFIG--SLLATAGRSSDNRNVCLWDTLLPPMNSLVHT------CHDGGATVLAYAPKHQLLISGGRK 2357 (2439)
T ss_pred eccccCCccccceeeee--hhhhccccCCCCCcccchhcccCcccceeee------ecCCCceEEEEcCcceEEEecCCc
Confidence 56677888888888875 56777653 3 899999643322222222 3388899999999986 8999999
Q ss_pred CcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccC
Q psy12614 224 GFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTR 275 (708)
Q Consensus 224 g~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~ 275 (708)
|.|++||++..+....++. +. ...++++|+..|.++||++..
T Consensus 2358 G~v~l~D~rqrql~h~~~~---------~~-~~~~f~~~ss~g~ikIw~~s~ 2399 (2439)
T KOG1064|consen 2358 GEVCLFDIRQRQLRHTFQA---------LD-TREYFVTGSSEGNIKIWRLSE 2399 (2439)
T ss_pred CcEEEeehHHHHHHHHhhh---------hh-hhheeeccCcccceEEEEccc
Confidence 9999999998877766654 33 456899999999999999987
|
|
| >PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal | Back alignment and domain information |
|---|
Probab=99.08 E-value=2.3e-07 Score=82.81 Aligned_cols=240 Identities=14% Similarity=0.076 Sum_probs=134.3
Q ss_pred EEEEcCCcEEEEEcCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEEEc-CCc
Q psy12614 347 VSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYST-ESC 425 (708)
Q Consensus 347 ~~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~-d~~ 425 (708)
++.+.+|++||.-.|..|.+-.....-. ....-..+.......=..++||||+.+||.+. .|+
T Consensus 3 ~~~~~~Gk~lAi~qd~~iEiRsa~Ddf~----------------si~~kcqVpkD~~PQWRkl~WSpD~tlLa~a~S~G~ 66 (282)
T PF15492_consen 3 LALSSDGKLLAILQDQCIEIRSAKDDFS----------------SIIGKCQVPKDPNPQWRKLAWSPDCTLLAYAESTGT 66 (282)
T ss_pred eeecCCCcEEEEEeccEEEEEeccCCch----------------heeEEEecCCCCCchheEEEECCCCcEEEEEcCCCe
Confidence 6788999999999999999877665430 00011223333344457899999999999976 999
Q ss_pred eEEEEEEecCCcceeEEeecCCcccccceeEEEEEecCC------CeEEEEecCCc--EEEec---CCCeEEEEEecCCC
Q psy12614 426 VRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVLISADS------TLLLAVSLNGP--LYIID---LSSLEIKYCVDPYK 494 (708)
Q Consensus 426 i~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~------~~l~~~~~dg~--i~~~~---~~~~~~~~~~~~~~ 494 (708)
|++||+.... ...+..-...++.. ...|..+.|-+-. ..|++....|. =|.+. ....+....|.-..
T Consensus 67 i~vfdl~g~~-lf~I~p~~~~~~d~-~~Aiagl~Fl~~~~s~~ws~ELlvi~Y~G~L~Sy~vs~gt~q~y~e~hsfsf~~ 144 (282)
T PF15492_consen 67 IRVFDLMGSE-LFVIPPAMSFPGDL-SDAIAGLIFLEYKKSAQWSYELLVINYRGQLRSYLVSVGTNQGYQENHSFSFSS 144 (282)
T ss_pred EEEEecccce-eEEcCcccccCCcc-ccceeeeEeeccccccccceeEEEEeccceeeeEEEEcccCCcceeeEEEEecc
Confidence 9999987411 11111100111111 2345556665422 24555667766 23322 22334445554333
Q ss_pred CCccCcceEEEEECCCCcEEEEEecCCeEEEEECCceeeecCCCCCCceEEEEcCCCCE--EEEEecCC------cEEEE
Q psy12614 495 SNLMSDVISLVQMSECKQYIVCADRKSHVVIWKNGQHHASLPRYRKPSTAMAIHPTLST--LVTVYSDH------RIVEF 566 (708)
Q Consensus 495 ~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~v~~l~~s~d~~~--l~~~~~dg------~i~vw 566 (708)
.. ...|+++.++|..++|++|+.... ++. .-.+....+++-..-.+..+ .++..+|+ +..+|
T Consensus 145 ~y--p~Gi~~~vy~p~h~LLlVgG~~~~------~~~--~s~a~~~GLtaWRiL~~~Pyyk~v~~~~~~~~~~~~~~~~~ 214 (282)
T PF15492_consen 145 HY--PHGINSAVYHPKHRLLLVGGCEQN------QDG--MSKASSCGLTAWRILSDSPYYKQVTSSEDDITASSKRRGLL 214 (282)
T ss_pred cC--CCceeEEEEcCCCCEEEEeccCCC------CCc--cccccccCceEEEEcCCCCcEEEccccCcccccccccccee
Confidence 33 668999999999999888874322 000 00111122222222212111 11122221 12333
Q ss_pred EcCCCCCCchhhhhhccCchhhhcCCCCeeEEEeCCCCCceEEEEcCeeEEEEecCCCC
Q psy12614 567 DLNRKAFTTFSRKLETNHPNEWLSRQLPVLGIEFDPQDSSLIYLMDDSALCVINKNKSL 625 (708)
Q Consensus 567 d~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~~~~l~~~~~d~~i~~wd~~~~~ 625 (708)
.+.+...- .........|..|..||||+.||+.+-+|.|.+|++..-.
T Consensus 215 ~~~~~~~f-----------s~~~~~~d~i~kmSlSPdg~~La~ih~sG~lsLW~iPsL~ 262 (282)
T PF15492_consen 215 RIPSFKFF-----------SRQGQEQDGIFKMSLSPDGSLLACIHFSGSLSLWEIPSLR 262 (282)
T ss_pred eccceeee-----------eccccCCCceEEEEECCCCCEEEEEEcCCeEEEEecCcch
Confidence 33322111 1112245689999999999999999999999999996544
|
|
| >PRK04043 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.06 E-value=1.8e-07 Score=94.36 Aligned_cols=206 Identities=10% Similarity=0.035 Sum_probs=131.0
Q ss_pred cEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCE-EEEEcC---CCcEEEEECCCCeEeEEEeecCCceEEEEEecC
Q psy12614 49 SIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDR-LFSGGL---QGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKK 122 (708)
Q Consensus 49 ~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~-l~s~~~---d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~ 122 (708)
.|.+-|.+.... + .+.. . +.+....|+ |+. ++..+. +..|.++|+.+++...... ..+.....+|+||
T Consensus 170 ~l~~~d~dg~~~-~-~~~~-~--~~~~~p~wSpDG~~~i~y~s~~~~~~~Iyv~dl~tg~~~~lt~-~~g~~~~~~~SPD 243 (419)
T PRK04043 170 NIVLADYTLTYQ-K-VIVK-G--GLNIFPKWANKEQTAFYYTSYGERKPTLYKYNLYTGKKEKIAS-SQGMLVVSDVSKD 243 (419)
T ss_pred eEEEECCCCCce-e-EEcc-C--CCeEeEEECCCCCcEEEEEEccCCCCEEEEEECCCCcEEEEec-CCCcEEeeEECCC
Confidence 455555544332 2 2221 1 357788999 664 554332 4579999999887655443 4556677889999
Q ss_pred CCEEEEEeC---CCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC----eEEEEEcCCCceEEEEEec
Q psy12614 123 KRLLAAGTE---QGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA----AVRVWDIHKGHAIHKMSLD 195 (708)
Q Consensus 123 ~~~la~~~~---d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d----~i~iwd~~~~~~~~~~~~~ 195 (708)
|+.|+.... +..|+++|+.+++.. .+..+.+......|+|||+.|+..+.. .|.+.|+.+++..+....+
T Consensus 244 G~~la~~~~~~g~~~Iy~~dl~~g~~~---~LT~~~~~d~~p~~SPDG~~I~F~Sdr~g~~~Iy~~dl~~g~~~rlt~~g 320 (419)
T PRK04043 244 GSKLLLTMAPKGQPDIYLYDTNTKTLT---QITNYPGIDVNGNFVEDDKRIVFVSDRLGYPNIFMKKLNSGSVEQVVFHG 320 (419)
T ss_pred CCEEEEEEccCCCcEEEEEECCCCcEE---EcccCCCccCccEECCCCCEEEEEECCCCCceEEEEECCCCCeEeCccCC
Confidence 998775432 356888898888763 344444434566899999988876542 7889999877764432211
Q ss_pred ccCCCCCceeEEEEEEccCCE-EEEEcC-C--------CcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEecC
Q psy12614 196 KSSKFSKNTAVWCVAFCADFT-IITGDS-G--------GFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVD 265 (708)
Q Consensus 196 ~~~~~~~~~~v~~~~~~~~~~-l~~~~~-d--------g~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d 265 (708)
. ....|+|||+ ++.... . ..|.+.|+.++.. ..+... .......|+|||+.|+....+
T Consensus 321 -------~---~~~~~SPDG~~Ia~~~~~~~~~~~~~~~~I~v~d~~~g~~-~~LT~~-~~~~~p~~SPDG~~I~f~~~~ 388 (419)
T PRK04043 321 -------K---NNSSVSTYKNYIVYSSRETNNEFGKNTFNLYLISTNSDYI-RRLTAN-GVNQFPRFSSDGGSIMFIKYL 388 (419)
T ss_pred -------C---cCceECCCCCEEEEEEcCCCcccCCCCcEEEEEECCCCCe-EECCCC-CCcCCeEECCCCCEEEEEEcc
Confidence 1 1248999996 443332 2 3688889887764 334322 233468899999988776543
Q ss_pred C---eEEEEEccC
Q psy12614 266 P---TVVCFQRTR 275 (708)
Q Consensus 266 g---~i~iw~~~~ 275 (708)
+ .+.+.++..
T Consensus 389 ~~~~~L~~~~l~g 401 (419)
T PRK04043 389 GNQSALGIIRLNY 401 (419)
T ss_pred CCcEEEEEEecCC
Confidence 2 466666655
|
|
| >COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.04 E-value=5.7e-09 Score=92.87 Aligned_cols=249 Identities=11% Similarity=0.183 Sum_probs=168.4
Q ss_pred CCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeE----EEEEecCC----------CCCcEEEEEEe----CCEEEE
Q psy12614 25 EPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHV----DRVFIGDP----------LSNSIECLTWF----NDRLFS 86 (708)
Q Consensus 25 h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~----~~~~~~h~----------~~~~v~~l~~~----~~~l~s 86 (708)
..+.|+++.|...|.|||+|...|.|.++.-....-. ...+++|. +...|..+.|. ...++.
T Consensus 25 ead~ItaVefd~tg~YlatGDkgGRVvlfer~~s~~ceykf~teFQshe~EFDYLkSleieEKin~I~w~~~t~r~hFLl 104 (460)
T COG5170 25 EADKITAVEFDETGLYLATGDKGGRVVLFEREKSYGCEYKFFTEFQSHELEFDYLKSLEIEEKINAIEWFDDTGRNHFLL 104 (460)
T ss_pred ccceeeEEEeccccceEeecCCCceEEEeecccccccchhhhhhhcccccchhhhhhccHHHHhhheeeecCCCcceEEE
Confidence 3567999999999999999999999999987653311 12456665 24578899998 456777
Q ss_pred EcCCCcEEEEECCCCeE------------------------------------------eEEE-eecCCceEEEEEecCC
Q psy12614 87 GGLQGFVNEYDMRRLNI------------------------------------------KSST-AVTSGTCWCLSVHKKK 123 (708)
Q Consensus 87 ~~~d~~i~vwd~~~~~~------------------------------------------~~~~-~~~~~~v~~~~~s~~~ 123 (708)
.+.|.+|++|.+..... .+.+ ..|.-.|.++.|+.|.
T Consensus 105 stNdktiKlWKiyeknlk~va~nnls~~~~~~~~g~~~s~~~l~lprls~hd~iiaa~p~rvyaNaH~yhiNSiS~NsD~ 184 (460)
T COG5170 105 STNDKTIKLWKIYEKNLKVVAENNLSDSFHSPMGGPLTSTKELLLPRLSEHDEIIAAKPCRVYANAHPYHINSISFNSDK 184 (460)
T ss_pred ecCCceeeeeeeecccchhhhccccccccccccCCCcCCHHHhhcccccccceEEEeccceeccccceeEeeeeeecCch
Confidence 78999999998644310 1111 3566778899999999
Q ss_pred CEEEEEeCCCcEEEEEccCC--cEEEEEeccccc-----ccEEEEEECCCCC-EEE-EecCCeEEEEEcCCCc------e
Q psy12614 124 RLLAAGTEQGHINLFQISDE--GLLYEKLLDRQQ-----GRILCTAWHSSGD-YLV-TGCAAAVRVWDIHKGH------A 188 (708)
Q Consensus 124 ~~la~~~~d~~i~iwd~~~~--~~~~~~~~~~~~-----~~v~~~~~s~d~~-~l~-~~~~d~i~iwd~~~~~------~ 188 (708)
..++++ .|-.|.+|+++-. .... ..+.+|. ..|++..|+|... .+. +.+.+.|++-|++... .
T Consensus 185 et~lSa-DdLrINLWnl~i~D~sFnI-VDiKP~nmeeLteVItSaeFhp~~cn~fmYSsSkG~Ikl~DlRq~alcdn~~k 262 (460)
T COG5170 185 ETLLSA-DDLRINLWNLEIIDGSFNI-VDIKPHNMEELTEVITSAEFHPEMCNVFMYSSSKGEIKLNDLRQSALCDNSKK 262 (460)
T ss_pred heeeec-cceeeeeccccccCCceEE-EeccCccHHHHHHHHhhcccCHhHcceEEEecCCCcEEehhhhhhhhccCchh
Confidence 888874 5678999998743 2211 2344443 4688899999753 333 3444499999987322 1
Q ss_pred EEEEEecccCC---CCCceeEEEEEEccCCEEEEEcCCCcEEEEeCCCC-eeEEEeeccc------------cCe---EE
Q psy12614 189 IHKMSLDKSSK---FSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTG-VQWSDVKTHK------------KDI---LA 249 (708)
Q Consensus 189 ~~~~~~~~~~~---~~~~~~v~~~~~~~~~~l~~~~~dg~i~~wd~~~~-~~~~~~~~~~------------~~i---~~ 249 (708)
+.........+ ......|..+.|+++|+++..-.--+|++||.+.. .++.+++-|. ..| ..
T Consensus 263 lfe~~~D~v~~~ff~eivsSISD~kFs~ngryIlsRdyltvkiwDvnm~k~pikTi~~h~~l~~~l~d~YEnDaifdkFe 342 (460)
T COG5170 263 LFELTIDGVDVDFFEEIVSSISDFKFSDNGRYILSRDYLTVKIWDVNMAKNPIKTIPMHCDLMDELNDVYENDAIFDKFE 342 (460)
T ss_pred hhhhccCcccchhHHHHhhhhcceEEcCCCcEEEEeccceEEEEecccccCCceeechHHHHHHHHHhhhhccceeeeEE
Confidence 11111110000 02245678899999998777777789999998754 4566664332 222 34
Q ss_pred EEEeCCCCEEEEEecCCeEEEEEccC
Q psy12614 250 LTVSEDENYLYCAGVDPTVVCFQRTR 275 (708)
Q Consensus 250 ~~~s~~~~~l~~~~~dg~i~iw~~~~ 275 (708)
+.|+.|.+.+.+|+..+..-+|-..+
T Consensus 343 isfSgd~~~v~sgsy~NNfgiyp~~s 368 (460)
T COG5170 343 ISFSGDDKHVLSGSYSNNFGIYPTDS 368 (460)
T ss_pred EEecCCcccccccccccceeeecccc
Confidence 78899999999999988888886444
|
|
| >COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.01 E-value=1.1e-08 Score=91.02 Aligned_cols=293 Identities=16% Similarity=0.145 Sum_probs=171.4
Q ss_pred cccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccc------------cceEEEEE
Q psy12614 243 HKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHE------------GDVKSLAL 310 (708)
Q Consensus 243 ~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~------------~~v~~l~~ 310 (708)
....|+++.|...|.+|++|...|.+.+|.... .. | ........+++|. ..|..+.|
T Consensus 25 ead~ItaVefd~tg~YlatGDkgGRVvlfer~~-----s~-~-----ceykf~teFQshe~EFDYLkSleieEKin~I~w 93 (460)
T COG5170 25 EADKITAVEFDETGLYLATGDKGGRVVLFEREK-----SY-G-----CEYKFFTEFQSHELEFDYLKSLEIEEKINAIEW 93 (460)
T ss_pred ccceeeEEEeccccceEeecCCCceEEEeeccc-----cc-c-----cchhhhhhhcccccchhhhhhccHHHHhhheee
Confidence 346789999999999999999999999998765 11 0 0111122344443 34667777
Q ss_pred e----CCEEEEEcCCCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEEEcCCeEEEEEecCCCCCCCCCCCCCCcc
Q psy12614 311 H----GNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTTGV 386 (708)
Q Consensus 311 ~----~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~ 386 (708)
. ...++..+.|.+|++|.+..+.+..+.. ..-..++.+.-.|.+ .+ -..+.+=.+... +..+
T Consensus 94 ~~~t~r~hFLlstNdktiKlWKiyeknlk~va~-nnls~~~~~~~~g~~-~s--~~~l~lprls~h---------d~ii- 159 (460)
T COG5170 94 FDDTGRNHFLLSTNDKTIKLWKIYEKNLKVVAE-NNLSDSFHSPMGGPL-TS--TKELLLPRLSEH---------DEII- 159 (460)
T ss_pred ecCCCcceEEEecCCceeeeeeeecccchhhhc-cccccccccccCCCc-CC--HHHhhccccccc---------ceEE-
Confidence 6 4567778899999999987765333220 000000100001100 00 000000000000 0000
Q ss_pred cCCCCceEEEEEE-ecCCCceEEEEeCCCCcEEEEEcCCceEEEEEEecCCcceeEEeecCCcccc--cceeEEEEEecC
Q psy12614 387 PLLSFPRLIVKMS-AVNNATIRCSVVSNDGKYVAYSTESCVRLHSLDLDGDKPQISRIKNLPAPLF--KSIFTHVLISAD 463 (708)
Q Consensus 387 ~~~~~~~~~~~~~-~~~~~~i~~~~~s~~g~~l~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~--~~~i~~~~~s~d 463 (708)
.....++. ..|...|.++.+..|.+.+++++|-.|.+|+++...+...+..++ |.... ..-|++..|+|.
T Consensus 160 -----aa~p~rvyaNaH~yhiNSiS~NsD~et~lSaDdLrINLWnl~i~D~sFnIVDiK--P~nmeeLteVItSaeFhp~ 232 (460)
T COG5170 160 -----AAKPCRVYANAHPYHINSISFNSDKETLLSADDLRINLWNLEIIDGSFNIVDIK--PHNMEELTEVITSAEFHPE 232 (460)
T ss_pred -----EeccceeccccceeEeeeeeecCchheeeeccceeeeeccccccCCceEEEecc--CccHHHHHHHHhhcccCHh
Confidence 00011111 367788999999999999999999999999998755554444321 22221 445777899996
Q ss_pred C-CeEEEEecCCc--EEEecCC-----CeEEEE-EecC-----CCCCccCcceEEEEECCCCcEEEEEecCCeEEEEECC
Q psy12614 464 S-TLLLAVSLNGP--LYIIDLS-----SLEIKY-CVDP-----YKSNLMSDVISLVQMSECKQYIVCADRKSHVVIWKNG 529 (708)
Q Consensus 464 ~-~~l~~~~~dg~--i~~~~~~-----~~~~~~-~~~~-----~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~ 529 (708)
. ..+...++.|. +-++... ..+... .+.. ..+. ...|..+.|+++|+|+++-+ --+|+|||+.
T Consensus 233 ~cn~fmYSsSkG~Ikl~DlRq~alcdn~~klfe~~~D~v~~~ff~ei--vsSISD~kFs~ngryIlsRd-yltvkiwDvn 309 (460)
T COG5170 233 MCNVFMYSSSKGEIKLNDLRQSALCDNSKKLFELTIDGVDVDFFEEI--VSSISDFKFSDNGRYILSRD-YLTVKIWDVN 309 (460)
T ss_pred HcceEEEecCCCcEEehhhhhhhhccCchhhhhhccCcccchhHHHH--hhhhcceEEcCCCcEEEEec-cceEEEEecc
Confidence 5 34445566666 4444321 111000 0000 0111 45788999999999999875 5699999998
Q ss_pred ---ceeeecCCCC------------CCc---eEEEEcCCCCEEEEEecCCcEEEEEcCC
Q psy12614 530 ---QHHASLPRYR------------KPS---TAMAIHPTLSTLVTVYSDHRIVEFDLNR 570 (708)
Q Consensus 530 ---~~~~~~~~~~------------~~v---~~l~~s~d~~~l~~~~~dg~i~vwd~~~ 570 (708)
+...+.+-|. ..| ..+.||-|.+.+++|+..+..-+|-..+
T Consensus 310 m~k~pikTi~~h~~l~~~l~d~YEnDaifdkFeisfSgd~~~v~sgsy~NNfgiyp~~s 368 (460)
T COG5170 310 MAKNPIKTIPMHCDLMDELNDVYENDAIFDKFEISFSGDDKHVLSGSYSNNFGIYPTDS 368 (460)
T ss_pred cccCCceeechHHHHHHHHHhhhhccceeeeEEEEecCCcccccccccccceeeecccc
Confidence 3444554443 222 3478999999999999888888876443
|
|
| >KOG1920|consensus | Back alignment and domain information |
|---|
Probab=99.01 E-value=1.2e-05 Score=85.88 Aligned_cols=292 Identities=13% Similarity=0.169 Sum_probs=178.4
Q ss_pred ccceeeeeeeeccC--CCCcEEEEEEcCCCCEEEEEeCCCc--EEEEeCCC-CC---eEEEEEecCCCCCcEEEEEEe--
Q psy12614 11 MGTYGVHNIKFYAP--EPKVINCIACEPKSSRLAVSRADQS--IEIWDISE-TP---HVDRVFIGDPLSNSIECLTWF-- 80 (708)
Q Consensus 11 ~~~~~~~~~~~~~~--h~~~v~~~~~s~~~~~la~~~~dg~--v~iwd~~~-~~---~~~~~~~~h~~~~~v~~l~~~-- 80 (708)
|..+.++....+.. |++.-.+..++|.-..+|++...+. +.++.++. ++ ... .+.....+..|.++.|.
T Consensus 1 MkNL~l~~~~~f~~~~~~~~~~~f~l~~~~~~~ass~~~~~~~~~~~ei~~~~kv~~~~~-s~~~~~gd~~i~s~~fl~d 79 (1265)
T KOG1920|consen 1 MKNLKLRYMKTFEIVAGPGNAQAFILSPELVTVASSTINELLGLKIFEIESVGKVRLVAE-SFLPEDGDDEIVSVQFLAD 79 (1265)
T ss_pred CCceeeeeeeeecccCCCCchhheeeccccceeeeceeeecccccceeeeccccccceee-cccCcCCCcceEEEEEecc
Confidence 45566666555544 4444455666666666666633222 34444433 22 111 12211113689999999
Q ss_pred CCEEEEEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEcc----CCc-----------E
Q psy12614 81 NDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQIS----DEG-----------L 145 (708)
Q Consensus 81 ~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~----~~~-----------~ 145 (708)
.+-++.+..+|.|.+-|.++.... ....-.+.|.+++||||++.++..+..+++.+-+.. ..+ .
T Consensus 80 ~~~i~v~~~~G~iilvd~et~~~e-ivg~vd~GI~aaswS~Dee~l~liT~~~tll~mT~~f~~i~E~~L~~d~~~~sk~ 158 (1265)
T KOG1920|consen 80 TNSICVITALGDIILVDPETLELE-IVGNVDNGISAASWSPDEELLALITGRQTLLFMTKDFEPIAEKPLDADDERKSKF 158 (1265)
T ss_pred cceEEEEecCCcEEEEccccccee-eeeeccCceEEEeecCCCcEEEEEeCCcEEEEEeccccchhcccccccccccccc
Confidence 888999999999999998875432 223345789999999999999999888887665431 000 0
Q ss_pred E------EEEecccc---------------------cccEEEEEECCCCCEEEE-----ecCC-eEEEEEcCCCceEEEE
Q psy12614 146 L------YEKLLDRQ---------------------QGRILCTAWHSSGDYLVT-----GCAA-AVRVWDIHKGHAIHKM 192 (708)
Q Consensus 146 ~------~~~~~~~~---------------------~~~v~~~~~s~d~~~l~~-----~~~d-~i~iwd~~~~~~~~~~ 192 (708)
+ ....+.+. .+.=.++.|--||+++|+ ...- .|++||-+ |..- ..
T Consensus 159 v~VGwGrkeTqfrgs~gr~~~~~~~~~ek~~~~~~~~~~~~~IsWRgDg~~fAVs~~~~~~~~RkirV~drE-g~Ln-s~ 236 (1265)
T KOG1920|consen 159 VNVGWGRKETQFRGSEGRQAARQKIEKEKALEQIEQDDHKTSISWRGDGEYFAVSFVESETGTRKIRVYDRE-GALN-ST 236 (1265)
T ss_pred ceecccccceeeecchhhhcccccccccccccchhhccCCceEEEccCCcEEEEEEEeccCCceeEEEeccc-chhh-cc
Confidence 0 00111111 112235899999999987 3333 89999976 4332 22
Q ss_pred EecccCCCCCceeEEEEEEccCCE-EEEE---cCCCcEEEEeCCCCee----EEEeeccccCeEEEEEeCCCCEEEE---
Q psy12614 193 SLDKSSKFSKNTAVWCVAFCADFT-IITG---DSGGFVRFWDGKTGVQ----WSDVKTHKKDILALTVSEDENYLYC--- 261 (708)
Q Consensus 193 ~~~~~~~~~~~~~v~~~~~~~~~~-l~~~---~~dg~i~~wd~~~~~~----~~~~~~~~~~i~~~~~s~~~~~l~~--- 261 (708)
... ....-.+++|-|.|. +++. .+++.|.++.- +|-. ...++.....+..++|+.++..|++
T Consensus 237 se~------~~~l~~~LsWkPsgs~iA~iq~~~sd~~IvffEr-NGL~hg~f~l~~p~de~~ve~L~Wns~sdiLAv~~~ 309 (1265)
T KOG1920|consen 237 SEP------VEGLQHSLSWKPSGSLIAAIQCKTSDSDIVFFER-NGLRHGEFVLPFPLDEKEVEELAWNSNSDILAVVTS 309 (1265)
T ss_pred cCc------ccccccceeecCCCCeEeeeeecCCCCcEEEEec-CCccccccccCCcccccchheeeecCCCCceeeeec
Confidence 211 145556899999886 4332 34667999984 3422 2223334445899999999999987
Q ss_pred EecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe---CCEEEEEcCCCeEEEEeC
Q psy12614 262 AGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH---GNRLYSGGLDSYLSLSYY 329 (708)
Q Consensus 262 ~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~---~~~l~s~~~d~~i~iw~~ 329 (708)
......|++|-..+ ..|.....+....... +.|+ ...|..-..+|...++++
T Consensus 310 ~~e~~~v~lwt~~N--------------yhWYLKq~l~~~~~~~--~~W~p~~~~~L~v~~~sG~~~v~~~ 364 (1265)
T KOG1920|consen 310 NLENSLVQLWTTGN--------------YHWYLKQELQFSQKAL--LMWDPVTEKTLHVLRESGQRLVRDF 364 (1265)
T ss_pred ccccceEEEEEecC--------------eEEEEEEEEecccccc--ccccCCCceeEEEEecCCcEEEEEE
Confidence 44555699999876 4576666665554444 6666 444555546676666555
|
|
| >KOG0309|consensus | Back alignment and domain information |
|---|
Probab=99.01 E-value=5.5e-09 Score=103.85 Aligned_cols=292 Identities=12% Similarity=0.091 Sum_probs=190.2
Q ss_pred CCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe----CCEEEEEcCCCcEEEEECCCC
Q psy12614 26 PKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF----NDRLFSGGLQGFVNEYDMRRL 101 (708)
Q Consensus 26 ~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~----~~~l~s~~~d~~i~vwd~~~~ 101 (708)
.+++.++.++|.|+-+|.++.-| +.|-|+...-...+.+. |.-.-.|-.+.|+ ..+-++......-.+|++...
T Consensus 24 ~~~~~a~si~p~grdi~lAsr~g-l~i~dld~p~~ppr~l~-h~tpw~vad~qws~h~a~~~wiVsts~qkaiiwnlA~s 101 (1081)
T KOG0309|consen 24 DGGFNAVSINPSGRDIVLASRQG-LYIIDLDDPFTPPRWLH-HITPWQVADVQWSPHPAKPYWIVSTSNQKAIIWNLAKS 101 (1081)
T ss_pred cCcccceeeccccchhhhhhhcC-eEEEeccCCCCCceeee-ccCcchhcceecccCCCCceeEEecCcchhhhhhhhcC
Confidence 46788999999999999988765 66667765322221222 2212446777888 444455555566678987643
Q ss_pred ---eEeEEEeecCCceEEEEEecCCC-EEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-
Q psy12614 102 ---NIKSSTAVTSGTCWCLSVHKKKR-LLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA- 176 (708)
Q Consensus 102 ---~~~~~~~~~~~~v~~~~~s~~~~-~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d- 176 (708)
.....+.+|+..|+.+-|+|... .+|+++.|..+..||++.....+ ..+..-...-..++|+-....+.+.+.+
T Consensus 102 s~~aIef~lhghsraitd~n~~~q~pdVlatcsvdt~vh~wd~rSp~~p~-ys~~~w~s~asqVkwnyk~p~vlasshg~ 180 (1081)
T KOG0309|consen 102 SSNAIEFVLHGHSRAITDINFNPQHPDVLATCSVDTYVHAWDMRSPHRPF-YSTSSWRSAASQVKWNYKDPNVLASSHGN 180 (1081)
T ss_pred CccceEEEEecCccceeccccCCCCCcceeeccccccceeeeccCCCcce-eeeecccccCceeeecccCcchhhhccCC
Confidence 34556779999999999999765 68899999999999999876543 2333334456778887654444444445
Q ss_pred eEEEEEcCCCc-eEEEEEecccCCCCCceeEEEEEEccC--CEEEEEcCCCcEEEEeCCCCee-EEEeeccccCeEEEEE
Q psy12614 177 AVRVWDIHKGH-AIHKMSLDKSSKFSKNTAVWCVAFCAD--FTIITGDSGGFVRFWDGKTGVQ-WSDVKTHKKDILALTV 252 (708)
Q Consensus 177 ~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~l~~~~~dg~i~~wd~~~~~~-~~~~~~~~~~i~~~~~ 252 (708)
.|.+||.+.|. .+..++. +...+..+.|..- +.+.+.+.||+|++||...... .........+|..-++
T Consensus 181 ~i~vwd~r~gs~pl~s~K~-------~vs~vn~~~fnr~~~s~~~s~~~d~tvkfw~y~kSt~e~~~~vtt~~piw~~r~ 253 (1081)
T KOG0309|consen 181 DIFVWDLRKGSTPLCSLKG-------HVSSVNSIDFNRFKYSEIMSSSNDGTVKFWDYSKSTTESKRTVTTNFPIWRGRY 253 (1081)
T ss_pred ceEEEeccCCCcceEEecc-------cceeeehHHHhhhhhhhhcccCCCCceeeecccccccccceeccccCcceeccc
Confidence 99999998765 4444543 3777888888763 3588999999999999865432 1222224556666777
Q ss_pred eCCCCEEEEE--ecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe------------CCEEEEE
Q psy12614 253 SEDENYLYCA--GVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH------------GNRLYSG 318 (708)
Q Consensus 253 s~~~~~l~~~--~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~------------~~~l~s~ 318 (708)
.|-|.-.+.- -.+..+.+++.+.....-- ......++..+.+|...|....|- .-.|+|-
T Consensus 254 ~Pfg~g~~~mp~~G~n~v~~~~c~n~d~e~n------~~~~~~pVh~F~GH~D~V~eFlWR~r~e~~~d~d~rdfQLVTW 327 (1081)
T KOG0309|consen 254 LPFGEGYCIMPMVGGNMVPQLRCENSDLEWN------VFDLNTPVHTFVGHDDVVLEFLWRKRKECDGDYDSRDFQLVTW 327 (1081)
T ss_pred cccCceeEeccccCCeeeeeccccchhhhhc------cccCCcceeeecCcchHHHHHhhhhcccccCCCCccceeEEEe
Confidence 7754322221 1122444444333000000 000113678899999998877665 2379999
Q ss_pred cCCCeEEEEeCCCCc
Q psy12614 319 GLDSYLSLSYYPPKT 333 (708)
Q Consensus 319 ~~d~~i~iw~~~~~~ 333 (708)
+.|..+++|.+....
T Consensus 328 SkD~~lrlWpI~~~i 342 (1081)
T KOG0309|consen 328 SKDQTLRLWPIDSQI 342 (1081)
T ss_pred ecCCceEeeeccHHH
Confidence 999999999997654
|
|
| >PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A | Back alignment and domain information |
|---|
Probab=99.00 E-value=5.4e-07 Score=84.95 Aligned_cols=220 Identities=15% Similarity=0.126 Sum_probs=144.2
Q ss_pred CCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEE-eCCEEEEEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCE
Q psy12614 47 DQSIEIWDISETPHVDRVFIGDPLSNSIECLTW-FNDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRL 125 (708)
Q Consensus 47 dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~-~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 125 (708)
+|.|..||..+|+.+-..-.+.. .....+... .++.+++++.++.|..||..+|+.+...... +.+.... ..++..
T Consensus 2 ~g~l~~~d~~tG~~~W~~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~l~~~d~~tG~~~W~~~~~-~~~~~~~-~~~~~~ 78 (238)
T PF13360_consen 2 DGTLSALDPRTGKELWSYDLGPG-IGGPVATAVPDGGRVYVASGDGNLYALDAKTGKVLWRFDLP-GPISGAP-VVDGGR 78 (238)
T ss_dssp TSEEEEEETTTTEEEEEEECSSS-CSSEEETEEEETTEEEEEETTSEEEEEETTTSEEEEEEECS-SCGGSGE-EEETTE
T ss_pred CCEEEEEECCCCCEEEEEECCCC-CCCccceEEEeCCEEEEEcCCCEEEEEECCCCCEEEEeecc-cccccee-eecccc
Confidence 68899999999887753322221 133343344 4888999999999999999999998888752 2222212 234556
Q ss_pred EEEEeCCCcEEEEEccCCcEEEEEeccc-cc-ccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCC
Q psy12614 126 LAAGTEQGHINLFQISDEGLLYEKLLDR-QQ-GRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSK 202 (708)
Q Consensus 126 la~~~~d~~i~iwd~~~~~~~~~~~~~~-~~-~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~ 202 (708)
+++++.++.++.+|..+|+......... .. ..........++..++.+..+ .|..+|+.+|+.+..........
T Consensus 79 v~v~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~--- 155 (238)
T PF13360_consen 79 VYVGTSDGSLYALDAKTGKVLWSIYLTSSPPAGVRSSSSPAVDGDRLYVGTSSGKLVALDPKTGKLLWKYPVGEPRG--- 155 (238)
T ss_dssp EEEEETTSEEEEEETTTSCEEEEEEE-SSCTCSTB--SEEEEETTEEEEEETCSEEEEEETTTTEEEEEEESSTT-S---
T ss_pred cccccceeeeEecccCCcceeeeeccccccccccccccCceEecCEEEEEeccCcEEEEecCCCcEEEEeecCCCCC---
Confidence 6777788899999999999986522211 11 111222222337778888867 99999999999998887742110
Q ss_pred cee------EEEEEEccCCEEEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccC
Q psy12614 203 NTA------VWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTR 275 (708)
Q Consensus 203 ~~~------v~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~ 275 (708)
... +..-....++.++.++.++.+.-+|+.+++.+.... ...+.. ....++..|++++.++.+..||+.+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~d~~tg~~~w~~~--~~~~~~-~~~~~~~~l~~~~~~~~l~~~d~~t 231 (238)
T PF13360_consen 156 SSPISSFSDINGSPVISDGRVYVSSGDGRVVAVDLATGEKLWSKP--ISGIYS-LPSVDGGTLYVTSSDGRLYALDLKT 231 (238)
T ss_dssp S--EEEETTEEEEEECCTTEEEEECCTSSEEEEETTTTEEEEEEC--SS-ECE-CEECCCTEEEEEETTTEEEEEETTT
T ss_pred CcceeeecccccceEEECCEEEEEcCCCeEEEEECCCCCEEEEec--CCCccC-CceeeCCEEEEEeCCCEEEEEECCC
Confidence 111 122333335588888888864444999998664333 222322 1456777888888999999999999
|
... |
| >KOG4714|consensus | Back alignment and domain information |
|---|
Probab=99.00 E-value=9.3e-09 Score=89.32 Aligned_cols=254 Identities=14% Similarity=0.140 Sum_probs=154.5
Q ss_pred EEecCCCCCcEEEEEEe-CCEEEEEcCCCcEEEEECCCCeEeE------------EEeecCCceEEEEEecCCCEEEEEe
Q psy12614 64 VFIGDPLSNSIECLTWF-NDRLFSGGLQGFVNEYDMRRLNIKS------------STAVTSGTCWCLSVHKKKRLLAAGT 130 (708)
Q Consensus 64 ~~~~h~~~~~v~~l~~~-~~~l~s~~~d~~i~vwd~~~~~~~~------------~~~~~~~~v~~~~~s~~~~~la~~~ 130 (708)
.+.+|. +-.|+.+.++ ...|+++..++.+......++.+.. .+..|.++-.+-+.+--++.++++.
T Consensus 30 ~i~~~~-d~~~~~~~~v~~~~lf~~e~~~~~ss~g~~r~~~~~~~~rt~~i~~~~~~a~~sep~p~~~~s~~~t~V~~~~ 108 (319)
T KOG4714|consen 30 EIMQHA-DVKLSKVSLSAEYILFTGETSSQIISLGKGRGRCISLWERDDGIDPFKVLAKNSEIDPNDACTMTDNRVCIGY 108 (319)
T ss_pred hccccc-ceEEEEeechhhheeecccchhheeeeccceEEEechhhcccCcCceeeeeccCCCCCcccccccCCceEecC
Confidence 445555 3457777787 7888888888888877766554432 3333333333333333467799999
Q ss_pred CCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEec------CCeEEEEEcCCCceEEEEEecccCCCCCce
Q psy12614 131 EQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGC------AAAVRVWDIHKGHAIHKMSLDKSSKFSKNT 204 (708)
Q Consensus 131 ~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~------~d~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 204 (708)
.||.+.+++.+.-.....+....|.+ -.+.++...++.+.++. .|..+.|+++..+.+..-.. ...
T Consensus 109 ~dg~~~v~s~~~~~~~~~~i~~~~~~-~as~~~~~~~~~i~s~~~g~~n~~d~~~a~~~~p~~t~~~~~~-------~~~ 180 (319)
T KOG4714|consen 109 ADGSLAVFSTDKDLALMSRIPSIHSG-SASRKICRHGNSILSGGCGNWNAQDNFYANTLDPIKTLIPSKK-------ALD 180 (319)
T ss_pred CCceEEEEechHHHhhhhhccccccc-ccccceeecccEEecCCcceEeeccceeeeccccccccccccc-------ccc
Confidence 99999999987622111011111111 12223333455555443 23566666543332221111 134
Q ss_pred eEEEEEEccCCE--EEEEcCCCcEEEEeCCCCee-EEEeeccccCeEEEEEeCC-CCEEEEEecCCeEEEEEccCCcccc
Q psy12614 205 AVWCVAFCADFT--IITGDSGGFVRFWDGKTGVQ-WSDVKTHKKDILALTVSED-ENYLYCAGVDPTVVCFQRTRKPQVC 280 (708)
Q Consensus 205 ~v~~~~~~~~~~--l~~~~~dg~i~~wd~~~~~~-~~~~~~~~~~i~~~~~s~~-~~~l~~~~~dg~i~iw~~~~~~~~~ 280 (708)
.|.+++-+|..+ +++|+.||.+.+||.+.... ...+..|+.+|..+-|.|. +..|+++++||.+..||..+....+
T Consensus 181 ~v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~~~p~S~l~ahk~~i~eV~FHpk~p~~Lft~sedGslw~wdas~~~l~i 260 (319)
T KOG4714|consen 181 AVTALCSHPAQQHLVCCGTDDGIVGLWDARNVAMPVSLLKAHKAEIWEVHFHPKNPEHLFTCSEDGSLWHWDASTTFLSI 260 (319)
T ss_pred cchhhhCCcccccEEEEecCCCeEEEEEcccccchHHHHHHhhhhhhheeccCCCchheeEecCCCcEEEEcCCCceEEe
Confidence 488888888653 78899999999999988754 3456789999999999984 5789999999999999998532221
Q ss_pred cCCCCCCCCcceE---------Ee-EEEeccccceEEEEEeCCEEEEEcCCCeEEEEe
Q psy12614 281 STSGPEQGSSVWV---------RS-VNRVIHEGDVKSLALHGNRLYSGGLDSYLSLSY 328 (708)
Q Consensus 281 ~~~g~~~~~~~~~---------~~-~~~~~~~~~v~~l~~~~~~l~s~~~d~~i~iw~ 328 (708)
.... .....|. .+ ..+......|.++...|..|++|+.-+.|.+++
T Consensus 261 ~~~~--s~~s~WLsgD~v~s~i~i~~ll~~~~~SinsfDV~g~~lVcgtd~eaIyl~~ 316 (319)
T KOG4714|consen 261 SNQA--SVISSWLSGDPVKSRIEITSLLPSRSLSINSFDVLGPCLVCGTDAEAIYLTR 316 (319)
T ss_pred cCcc--ccccccccCCcccceEeeeccccccceeeeeeeccCceEEeccccceEEEec
Confidence 1110 0112221 11 112222334555555599999999888888764
|
|
| >KOG3914|consensus | Back alignment and domain information |
|---|
Probab=98.99 E-value=1.1e-08 Score=94.90 Aligned_cols=160 Identities=15% Similarity=0.181 Sum_probs=110.6
Q ss_pred eEEEEeCCCCcEEEEEc-CCceEEEEEEecCCcceeEEeecCCcccccceeEEEEEecCCCeEEEEecCCcEEEecCCCe
Q psy12614 406 IRCSVVSNDGKYVAYST-ESCVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVLISADSTLLLAVSLNGPLYIIDLSSL 484 (708)
Q Consensus 406 i~~~~~s~~g~~l~~~~-d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~~~~~dg~i~~~~~~~~ 484 (708)
...+..++.++++|++. +....++++........+... .+.. ..-+++.|-.+...+.++...|.+|.++..+.
T Consensus 65 ~~~~~~s~~~~llAv~~~~K~~~~f~~~~~~~~~kl~~~--~~v~---~~~~ai~~~~~~~sv~v~dkagD~~~~di~s~ 139 (390)
T KOG3914|consen 65 PALVLTSDSGRLVAVATSSKQRAVFDYRENPKGAKLLDV--SCVP---KRPTAISFIREDTSVLVADKAGDVYSFDILSA 139 (390)
T ss_pred ccccccCCCceEEEEEeCCCceEEEEEecCCCcceeeeE--eecc---cCcceeeeeeccceEEEEeecCCceeeeeecc
Confidence 34556788999999876 556667777753321222221 2221 12333666666667666666666444433221
Q ss_pred EEEEEecCCCCCccCcceEEEEECCCCcEEEEEecCCeEEEEECCce---eeecCCCCCCceEEEEcCCCCEEEEEecCC
Q psy12614 485 EIKYCVDPYKSNLMSDVISLVQMSECKQYIVCADRKSHVVIWKNGQH---HASLPRYRKPSTAMAIHPTLSTLVTVYSDH 561 (708)
Q Consensus 485 ~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~---~~~~~~~~~~v~~l~~s~d~~~l~~~~~dg 561 (708)
.. ......-|| -..++.++|+||++++++++.|..|+|-.++.. ..-+-||..-|..++.-+ +..|++++.|+
T Consensus 140 ~~-~~~~~~lGh--vSml~dVavS~D~~~IitaDRDEkIRvs~ypa~f~IesfclGH~eFVS~isl~~-~~~LlS~sGD~ 215 (390)
T KOG3914|consen 140 DS-GRCEPILGH--VSMLLDVAVSPDDQFIITADRDEKIRVSRYPATFVIESFCLGHKEFVSTISLTD-NYLLLSGSGDK 215 (390)
T ss_pred cc-cCcchhhhh--hhhhheeeecCCCCEEEEecCCceEEEEecCcccchhhhccccHhheeeeeecc-CceeeecCCCC
Confidence 11 223334477 889999999999999999999999999988822 225568999999999985 56699999999
Q ss_pred cEEEEEcCCCCCC
Q psy12614 562 RIVEFDLNRKAFT 574 (708)
Q Consensus 562 ~i~vwd~~~~~~~ 574 (708)
++++||+.+++..
T Consensus 216 tlr~Wd~~sgk~L 228 (390)
T KOG3914|consen 216 TLRLWDITSGKLL 228 (390)
T ss_pred cEEEEecccCCcc
Confidence 9999999999876
|
|
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=98.99 E-value=9e-07 Score=99.64 Aligned_cols=241 Identities=11% Similarity=0.031 Sum_probs=152.8
Q ss_pred EEEEEe---CCEEEEEcCCCcEEEEECCCCeEeEEEee--c------------CCceEEEEEecCCCEEEEEeC-CCcEE
Q psy12614 75 ECLTWF---NDRLFSGGLQGFVNEYDMRRLNIKSSTAV--T------------SGTCWCLSVHKKKRLLAAGTE-QGHIN 136 (708)
Q Consensus 75 ~~l~~~---~~~l~s~~~d~~i~vwd~~~~~~~~~~~~--~------------~~~v~~~~~s~~~~~la~~~~-d~~i~ 136 (708)
..++++ +..+++-..++.|++||... ..+..+.+ . -.....++++++++.|+++.. .+.|+
T Consensus 571 ~gvavd~~~g~lyVaDs~n~rI~v~d~~G-~~i~~ig~~g~~G~~dG~~~~a~f~~P~GIavd~~gn~LYVaDt~n~~Ir 649 (1057)
T PLN02919 571 GKLAIDLLNNRLFISDSNHNRIVVTDLDG-NFIVQIGSTGEEGLRDGSFEDATFNRPQGLAYNAKKNLLYVADTENHALR 649 (1057)
T ss_pred ceEEEECCCCeEEEEECCCCeEEEEeCCC-CEEEEEccCCCcCCCCCchhccccCCCcEEEEeCCCCEEEEEeCCCceEE
Confidence 357776 44566667788999999865 43333332 1 123578999999887666544 57799
Q ss_pred EEEccCCcEEEEEe-------cccc-------cccEEEEEECCC-CCEEEEecCC-eEEEEEcCCCceEEEEEecc----
Q psy12614 137 LFQISDEGLLYEKL-------LDRQ-------QGRILCTAWHSS-GDYLVTGCAA-AVRVWDIHKGHAIHKMSLDK---- 196 (708)
Q Consensus 137 iwd~~~~~~~~~~~-------~~~~-------~~~v~~~~~s~d-~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~---- 196 (708)
++|..++....... ..+. -.....++|+|+ +..+++.+.+ .|++||..++........+.
T Consensus 650 ~id~~~~~V~tlag~G~~g~~~~gg~~~~~~~ln~P~gVa~dp~~g~LyVad~~~~~I~v~d~~~g~v~~~~G~G~~~~~ 729 (1057)
T PLN02919 650 EIDFVNETVRTLAGNGTKGSDYQGGKKGTSQVLNSPWDVCFEPVNEKVYIAMAGQHQIWEYNISDGVTRVFSGDGYERNL 729 (1057)
T ss_pred EEecCCCEEEEEeccCcccCCCCCChhhhHhhcCCCeEEEEecCCCeEEEEECCCCeEEEEECCCCeEEEEecCCccccC
Confidence 99988876531110 0000 112457899995 5555555566 99999998775432111000
Q ss_pred cCCC---CCceeEEEEEEccCCE--EEEEcCCCcEEEEeCCCCeeEEEeec---------------------cccCeEEE
Q psy12614 197 SSKF---SKNTAVWCVAFCADFT--IITGDSGGFVRFWDGKTGVQWSDVKT---------------------HKKDILAL 250 (708)
Q Consensus 197 ~~~~---~~~~~v~~~~~~~~~~--l~~~~~dg~i~~wd~~~~~~~~~~~~---------------------~~~~i~~~ 250 (708)
.+.. ..-.....++++|++. +++-..++.|++||+.++.......+ .-.....+
T Consensus 730 ~g~~~~~~~~~~P~GIavspdG~~LYVADs~n~~Irv~D~~tg~~~~~~gg~~~~~~~l~~fG~~dG~g~~~~l~~P~Gv 809 (1057)
T PLN02919 730 NGSSGTSTSFAQPSGISLSPDLKELYIADSESSSIRALDLKTGGSRLLAGGDPTFSDNLFKFGDHDGVGSEVLLQHPLGV 809 (1057)
T ss_pred CCCccccccccCccEEEEeCCCCEEEEEECCCCeEEEEECCCCcEEEEEecccccCcccccccCCCCchhhhhccCCcee
Confidence 0000 0013456799999984 45556678999999987653211100 01124688
Q ss_pred EEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEE--------------eccccceEEEEEe--CCE
Q psy12614 251 TVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNR--------------VIHEGDVKSLALH--GNR 314 (708)
Q Consensus 251 ~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~--------------~~~~~~v~~l~~~--~~~ 314 (708)
+++++|+.+++-..++.|++||..+ +. ...+ ...-.....++++ |+.
T Consensus 810 avd~dG~LYVADs~N~rIrviD~~t--------g~---------v~tiaG~G~~G~~dG~~~~a~l~~P~GIavd~dG~l 872 (1057)
T PLN02919 810 LCAKDGQIYVADSYNHKIKKLDPAT--------KR---------VTTLAGTGKAGFKDGKALKAQLSEPAGLALGENGRL 872 (1057)
T ss_pred eEeCCCcEEEEECCCCEEEEEECCC--------Ce---------EEEEeccCCcCCCCCcccccccCCceEEEEeCCCCE
Confidence 9999999888888899999999987 32 1111 1122356778887 788
Q ss_pred EEEEcCCCeEEEEeCCCCc
Q psy12614 315 LYSGGLDSYLSLSYYPPKT 333 (708)
Q Consensus 315 l~s~~~d~~i~iw~~~~~~ 333 (708)
+++-+.++.|++||+.+..
T Consensus 873 yVaDt~Nn~Irvid~~~~~ 891 (1057)
T PLN02919 873 FVADTNNSLIRYLDLNKGE 891 (1057)
T ss_pred EEEECCCCEEEEEECCCCc
Confidence 8888899999999998765
|
|
| >KOG0309|consensus | Back alignment and domain information |
|---|
Probab=98.99 E-value=3.8e-09 Score=104.91 Aligned_cols=201 Identities=14% Similarity=0.227 Sum_probs=143.3
Q ss_pred CCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCC--CE-EEEecCCeEEEEEcCCC-
Q psy12614 111 SGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSG--DY-LVTGCAAAVRVWDIHKG- 186 (708)
Q Consensus 111 ~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~--~~-l~~~~~d~i~iwd~~~~- 186 (708)
.+.+.++.++|.|+-+|.++.-| +.+.|+...-..+...-....-.|-.+.|+|.. .+ +++.+...-.+|++...
T Consensus 24 ~~~~~a~si~p~grdi~lAsr~g-l~i~dld~p~~ppr~l~h~tpw~vad~qws~h~a~~~wiVsts~qkaiiwnlA~ss 102 (1081)
T KOG0309|consen 24 DGGFNAVSINPSGRDIVLASRQG-LYIIDLDDPFTPPRWLHHITPWQVADVQWSPHPAKPYWIVSTSNQKAIIWNLAKSS 102 (1081)
T ss_pred cCcccceeeccccchhhhhhhcC-eEEEeccCCCCCceeeeccCcchhcceecccCCCCceeEEecCcchhhhhhhhcCC
Confidence 36788999999999999988876 567777754322111111112346677787754 33 44444447778987642
Q ss_pred -ceEEEEEecccCCCCCceeEEEEEEccCCE--EEEEcCCCcEEEEeCCCCe-eEEEeeccccCeEEEEEeCCCCEEEEE
Q psy12614 187 -HAIHKMSLDKSSKFSKNTAVWCVAFCADFT--IITGDSGGFVRFWDGKTGV-QWSDVKTHKKDILALTVSEDENYLYCA 262 (708)
Q Consensus 187 -~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--l~~~~~dg~i~~wd~~~~~-~~~~~~~~~~~i~~~~~s~~~~~l~~~ 262 (708)
..+.-+.. +|...++.+.|.|... +++++.|-.+..||+++.. .+.....-......+.|+-....+.+.
T Consensus 103 ~~aIef~lh------ghsraitd~n~~~q~pdVlatcsvdt~vh~wd~rSp~~p~ys~~~w~s~asqVkwnyk~p~vlas 176 (1081)
T KOG0309|consen 103 SNAIEFVLH------GHSRAITDINFNPQHPDVLATCSVDTYVHAWDMRSPHRPFYSTSSWRSAASQVKWNYKDPNVLAS 176 (1081)
T ss_pred ccceEEEEe------cCccceeccccCCCCCcceeeccccccceeeeccCCCcceeeeecccccCceeeecccCcchhhh
Confidence 33333332 6699999999999874 8899999999999998764 455544444556778888766556666
Q ss_pred ecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe---CCEEEEEcCCCeEEEEeCCCCc
Q psy12614 263 GVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH---GNRLYSGGLDSYLSLSYYPPKT 333 (708)
Q Consensus 263 ~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~---~~~l~s~~~d~~i~iw~~~~~~ 333 (708)
+..+.|++||.+. |. .++..+.+|...|..+.|. -..+.+.+.|++|+.|+.+...
T Consensus 177 shg~~i~vwd~r~--------gs-------~pl~s~K~~vs~vn~~~fnr~~~s~~~s~~~d~tvkfw~y~kSt 235 (1081)
T KOG0309|consen 177 SHGNDIFVWDLRK--------GS-------TPLCSLKGHVSSVNSIDFNRFKYSEIMSSSNDGTVKFWDYSKST 235 (1081)
T ss_pred ccCCceEEEeccC--------CC-------cceEEecccceeeehHHHhhhhhhhhcccCCCCceeeecccccc
Confidence 6678999999988 54 2566777899999999988 6788999999999999997654
|
|
| >PRK04043 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=98.99 E-value=1.5e-07 Score=94.84 Aligned_cols=220 Identities=8% Similarity=0.025 Sum_probs=134.6
Q ss_pred CCCCccceeeeeeeeccCCCCcEEEEEEcCCCCE-EEEEeC---CCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--
Q psy12614 7 KRNTMGTYGVHNIKFYAPEPKVINCIACEPKSSR-LAVSRA---DQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF-- 80 (708)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~-la~~~~---dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~-- 80 (708)
++.++-+++....+.+.... .+....|||||+. ++..+. +..|.++|+.+++... +.... +......|+
T Consensus 169 ~~l~~~d~dg~~~~~~~~~~-~~~~p~wSpDG~~~i~y~s~~~~~~~Iyv~dl~tg~~~~--lt~~~--g~~~~~~~SPD 243 (419)
T PRK04043 169 SNIVLADYTLTYQKVIVKGG-LNIFPKWANKEQTAFYYTSYGERKPTLYKYNLYTGKKEK--IASSQ--GMLVVSDVSKD 243 (419)
T ss_pred ceEEEECCCCCceeEEccCC-CeEeEEECCCCCcEEEEEEccCCCCEEEEEECCCCcEEE--EecCC--CcEEeeEECCC
Confidence 34445555555445443333 7789999999985 665433 3569999998887643 33344 667778899
Q ss_pred CCEEE-EEcC--CCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCC-C--cEEEEEccCCcEEEEEecccc
Q psy12614 81 NDRLF-SGGL--QGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQ-G--HINLFQISDEGLLYEKLLDRQ 154 (708)
Q Consensus 81 ~~~l~-s~~~--d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d-~--~i~iwd~~~~~~~~~~~~~~~ 154 (708)
|+.|+ +.+. +..|.++|+.+++.. .+..+.+......|+|||+.|+..+.. + .|++.|+.+++... ....+.
T Consensus 244 G~~la~~~~~~g~~~Iy~~dl~~g~~~-~LT~~~~~d~~p~~SPDG~~I~F~Sdr~g~~~Iy~~dl~~g~~~r-lt~~g~ 321 (419)
T PRK04043 244 GSKLLLTMAPKGQPDIYLYDTNTKTLT-QITNYPGIDVNGNFVEDDKRIVFVSDRLGYPNIFMKKLNSGSVEQ-VVFHGK 321 (419)
T ss_pred CCEEEEEEccCCCcEEEEEECCCCcEE-EcccCCCccCccEECCCCCEEEEEECCCCCceEEEEECCCCCeEe-CccCCC
Confidence 66665 3433 356888898887644 344344334456899999988877642 2 68888998887741 122221
Q ss_pred cccEEEEEECCCCCEEEEecC--------C--eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEc-C
Q psy12614 155 QGRILCTAWHSSGDYLVTGCA--------A--AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGD-S 222 (708)
Q Consensus 155 ~~~v~~~~~s~d~~~l~~~~~--------d--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~-~ 222 (708)
....|+|||++|+..+. + .|.+.|+.++.. ..+... .......|+|||+ ++... .
T Consensus 322 ----~~~~~SPDG~~Ia~~~~~~~~~~~~~~~~I~v~d~~~g~~-~~LT~~--------~~~~~p~~SPDG~~I~f~~~~ 388 (419)
T PRK04043 322 ----NNSSVSTYKNYIVYSSRETNNEFGKNTFNLYLISTNSDYI-RRLTAN--------GVNQFPRFSSDGGSIMFIKYL 388 (419)
T ss_pred ----cCceECCCCCEEEEEEcCCCcccCCCCcEEEEEECCCCCe-EECCCC--------CCcCCeEECCCCCEEEEEEcc
Confidence 12489999999886543 2 578888877764 333322 1223578999996 43332 2
Q ss_pred CC--cEEEEeCCCCeeEEEeeccccCe
Q psy12614 223 GG--FVRFWDGKTGVQWSDVKTHKKDI 247 (708)
Q Consensus 223 dg--~i~~wd~~~~~~~~~~~~~~~~i 247 (708)
.+ .+.+.++. |.....+....+.+
T Consensus 389 ~~~~~L~~~~l~-g~~~~~l~~~~g~~ 414 (419)
T PRK04043 389 GNQSALGIIRLN-YNKSFLFPLKVGKI 414 (419)
T ss_pred CCcEEEEEEecC-CCeeEEeecCCCcc
Confidence 22 36667764 43333443333333
|
|
| >KOG4649|consensus | Back alignment and domain information |
|---|
Probab=98.98 E-value=6.1e-06 Score=72.32 Aligned_cols=133 Identities=11% Similarity=0.093 Sum_probs=96.4
Q ss_pred CCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe-CCEEEEEcCCCcEEEEECCCCeEeEEEeecCCceEE
Q psy12614 38 SSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF-NDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWC 116 (708)
Q Consensus 38 ~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~-~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~ 116 (708)
..+++.|+..+.+.--|..+|...-..+- ..+|.+-+.. |++++.|...|.+++.+.++|.+...+..-..-=..
T Consensus 23 kT~v~igSHs~~~~avd~~sG~~~We~il----g~RiE~sa~vvgdfVV~GCy~g~lYfl~~~tGs~~w~f~~~~~vk~~ 98 (354)
T KOG4649|consen 23 KTLVVIGSHSGIVIAVDPQSGNLIWEAIL----GVRIECSAIVVGDFVVLGCYSGGLYFLCVKTGSQIWNFVILETVKVR 98 (354)
T ss_pred ceEEEEecCCceEEEecCCCCcEEeehhh----CceeeeeeEEECCEEEEEEccCcEEEEEecchhheeeeeehhhhccc
Confidence 35677889999999999999987543333 2667777777 999999999999999999999887777654332233
Q ss_pred EEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECC-CCCEEEEecCC
Q psy12614 117 LSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHS-SGDYLVTGCAA 176 (708)
Q Consensus 117 ~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~-d~~~l~~~~~d 176 (708)
....+++..+..|+.|++.+..|..+...++. .+...+...+-+..| ++...++...+
T Consensus 99 a~~d~~~glIycgshd~~~yalD~~~~~cVyk--skcgG~~f~sP~i~~g~~sly~a~t~G 157 (354)
T KOG4649|consen 99 AQCDFDGGLIYCGSHDGNFYALDPKTYGCVYK--SKCGGGTFVSPVIAPGDGSLYAAITAG 157 (354)
T ss_pred eEEcCCCceEEEecCCCcEEEecccccceEEe--cccCCceeccceecCCCceEEEEeccc
Confidence 45677899999999999999999999888854 332233333445556 44444443333
|
|
| >KOG3914|consensus | Back alignment and domain information |
|---|
Probab=98.97 E-value=5.8e-09 Score=96.59 Aligned_cols=164 Identities=11% Similarity=0.095 Sum_probs=118.4
Q ss_pred EEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCe---EEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECCCCeE
Q psy12614 29 INCIACEPKSSRLAVSRADQSIEIWDISETPH---VDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMRRLNI 103 (708)
Q Consensus 29 v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~---~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~~~ 103 (708)
+..+..+|++++||++..+....++++..... +........-...++.+..+ ......++....+.+|....+.+
T Consensus 65 ~~~~~~s~~~~llAv~~~~K~~~~f~~~~~~~~~kl~~~~~v~~~~~ai~~~~~~~sv~v~dkagD~~~~di~s~~~~~~ 144 (390)
T KOG3914|consen 65 PALVLTSDSGRLVAVATSSKQRAVFDYRENPKGAKLLDVSCVPKRPTAISFIREDTSVLVADKAGDVYSFDILSADSGRC 144 (390)
T ss_pred ccccccCCCceEEEEEeCCCceEEEEEecCCCcceeeeEeecccCcceeeeeeccceEEEEeecCCceeeeeecccccCc
Confidence 44566788999999998888877777765432 11122222212344444444 33333556677888888877443
Q ss_pred eEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEE
Q psy12614 104 KSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWD 182 (708)
Q Consensus 104 ~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd 182 (708)
..+-+|-..++.++++||+++++++..|..|++-.......+. .-..||..-|..++.-++. .|++++.| ++++||
T Consensus 145 -~~~lGhvSml~dVavS~D~~~IitaDRDEkIRvs~ypa~f~Ie-sfclGH~eFVS~isl~~~~-~LlS~sGD~tlr~Wd 221 (390)
T KOG3914|consen 145 -EPILGHVSMLLDVAVSPDDQFIITADRDEKIRVSRYPATFVIE-SFCLGHKEFVSTISLTDNY-LLLSGSGDKTLRLWD 221 (390)
T ss_pred -chhhhhhhhhheeeecCCCCEEEEecCCceEEEEecCcccchh-hhccccHhheeeeeeccCc-eeeecCCCCcEEEEe
Confidence 4456899999999999999999999999999998877655442 4456899999999997654 58999999 999999
Q ss_pred cCCCceEEEEEec
Q psy12614 183 IHKGHAIHKMSLD 195 (708)
Q Consensus 183 ~~~~~~~~~~~~~ 195 (708)
+.+|+.+..+...
T Consensus 222 ~~sgk~L~t~dl~ 234 (390)
T KOG3914|consen 222 ITSGKLLDTCDLS 234 (390)
T ss_pred cccCCcccccchh
Confidence 9999998776543
|
|
| >KOG4649|consensus | Back alignment and domain information |
|---|
Probab=98.96 E-value=1.6e-05 Score=69.83 Aligned_cols=142 Identities=22% Similarity=0.284 Sum_probs=101.6
Q ss_pred CCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCC
Q psy12614 123 KRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFS 201 (708)
Q Consensus 123 ~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~ 201 (708)
..+++.|+..+.+.--|..+|++..+..+. .++.+-+.- -|++++.|+.. .+++.+.++|+....+....
T Consensus 23 kT~v~igSHs~~~~avd~~sG~~~We~ilg---~RiE~sa~v-vgdfVV~GCy~g~lYfl~~~tGs~~w~f~~~~----- 93 (354)
T KOG4649|consen 23 KTLVVIGSHSGIVIAVDPQSGNLIWEAILG---VRIECSAIV-VGDFVVLGCYSGGLYFLCVKTGSQIWNFVILE----- 93 (354)
T ss_pred ceEEEEecCCceEEEecCCCCcEEeehhhC---ceeeeeeEE-ECCEEEEEEccCcEEEEEecchhheeeeeehh-----
Confidence 346777888999999999999988766653 333333222 47789999999 99999999998888877642
Q ss_pred CceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccC
Q psy12614 202 KNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTR 275 (708)
Q Consensus 202 ~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~ 275 (708)
.-.+ .....+++. +..|+.|++.+..|.++..++...+...+-..+-+..|....|+.+...|.+.--..++
T Consensus 94 -~vk~-~a~~d~~~glIycgshd~~~yalD~~~~~cVykskcgG~~f~sP~i~~g~~sly~a~t~G~vlavt~~~ 166 (354)
T KOG4649|consen 94 -TVKV-RAQCDFDGGLIYCGSHDGNFYALDPKTYGCVYKSKCGGGTFVSPVIAPGDGSLYAAITAGAVLAVTKNP 166 (354)
T ss_pred -hhcc-ceEEcCCCceEEEecCCCcEEEecccccceEEecccCCceeccceecCCCceEEEEeccceEEEEccCC
Confidence 1222 223455664 78999999999999999988888776655556667777444566666667666555555
|
|
| >KOG4532|consensus | Back alignment and domain information |
|---|
Probab=98.95 E-value=1.9e-07 Score=81.79 Aligned_cols=218 Identities=11% Similarity=0.041 Sum_probs=141.8
Q ss_pred CCCcEEEEeCCCCC--eEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECCCCeE-eEEEeecCCceEEEEEe
Q psy12614 46 ADQSIEIWDISETP--HVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMRRLNI-KSSTAVTSGTCWCLSVH 120 (708)
Q Consensus 46 ~dg~v~iwd~~~~~--~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~~~-~~~~~~~~~~v~~~~~s 120 (708)
..-.|-+|+.-+.. .++ ..+|-. ..-..|. ..+|+.||..|.+.+|...+.+. ......|...|+-+.=.
T Consensus 50 ~t~sv~i~~~y~N~~~iv~-~y~g~~----F~p~s~~~kc~~la~gG~~g~fd~~~~~tn~~h~~~cd~snn~v~~~~r~ 124 (344)
T KOG4532|consen 50 KTISVPINSHYSNPKGIVE-FYTGMT----FTPGSFINKCVTLADGGASGQFDLFACNTNDGHLYQCDVSNNDVTLVKRY 124 (344)
T ss_pred ceeeeEeccccCCchhhEE-eeeccc----ccchHhhccccEEEeccccceeeeecccCcccceeeecccccchhhhhhh
Confidence 34467888877644 222 333222 1112222 57899999999999999987553 33333444433221111
Q ss_pred cC-CCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCC-ceEEEEEeccc
Q psy12614 121 KK-KRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKG-HAIHKMSLDKS 197 (708)
Q Consensus 121 ~~-~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~-~~~~~~~~~~~ 197 (708)
-| .-.+..++.|.++++.+++.+......... .-.+.++++++|++++++.+.. .|..|.+... +.+..+...
T Consensus 125 cd~~~~~~i~sndht~k~~~~~~~s~~~~~h~~--~~~~ns~~~snd~~~~~~Vgds~~Vf~y~id~~sey~~~~~~a-- 200 (344)
T KOG4532|consen 125 CDLKFPLNIASNDHTGKTMVVSGDSNKFAVHNQ--NLTQNSLHYSNDPSWGSSVGDSRRVFRYAIDDESEYIENIYEA-- 200 (344)
T ss_pred cccccceeeccCCcceeEEEEecCcccceeecc--ccceeeeEEcCCCceEEEecCCCcceEEEeCCccceeeeeEec--
Confidence 11 123556788999999998866543111111 1238899999999999999988 9999988653 333333332
Q ss_pred CCCCCceeEEEEEEccCC-EEEEEcCCCcEEEEeCCCCeeE-----EEeeccccCeEEEEEeCCC--CEEEEEecCCeEE
Q psy12614 198 SKFSKNTAVWCVAFCADF-TIITGDSGGFVRFWDGKTGVQW-----SDVKTHKKDILALTVSEDE--NYLYCAGVDPTVV 269 (708)
Q Consensus 198 ~~~~~~~~v~~~~~~~~~-~l~~~~~dg~i~~wd~~~~~~~-----~~~~~~~~~i~~~~~s~~~--~~l~~~~~dg~i~ 269 (708)
..+..-.+..|+... +++++..||++.|||++..... .+-+.|.+.+..+.|++.| .+|+..-.-+.+.
T Consensus 201 ---~t~D~gF~~S~s~~~~~FAv~~Qdg~~~I~DVR~~~tpm~~~sstrp~hnGa~R~c~Fsl~g~lDLLf~sEhfs~~h 277 (344)
T KOG4532|consen 201 ---PTSDHGFYNSFSENDLQFAVVFQDGTCAIYDVRNMATPMAEISSTRPHHNGAFRVCRFSLYGLLDLLFISEHFSRVH 277 (344)
T ss_pred ---ccCCCceeeeeccCcceEEEEecCCcEEEEEecccccchhhhcccCCCCCCceEEEEecCCCcceEEEEecCcceEE
Confidence 114445677888766 5999999999999999875322 2335689999999999866 3555555567899
Q ss_pred EEEccC
Q psy12614 270 CFQRTR 275 (708)
Q Consensus 270 iw~~~~ 275 (708)
+.|+++
T Consensus 278 v~D~R~ 283 (344)
T KOG4532|consen 278 VVDTRN 283 (344)
T ss_pred EEEccc
Confidence 999988
|
|
| >KOG3617|consensus | Back alignment and domain information |
|---|
Probab=98.94 E-value=6.2e-07 Score=91.10 Aligned_cols=190 Identities=13% Similarity=0.110 Sum_probs=121.4
Q ss_pred EEEEEEcCCCCEEEEEeC----CCcEEEEeCCCCCeEE-EEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECCCC
Q psy12614 29 INCIACEPKSSRLAVSRA----DQSIEIWDISETPHVD-RVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMRRL 101 (708)
Q Consensus 29 v~~~~~s~~~~~la~~~~----dg~v~iwd~~~~~~~~-~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~ 101 (708)
-+-.+|+|...++|+++- .|+|.||-- +|+... .+.+ -.+++++|+ .-.|++|-.-|.+.+|...+.
T Consensus 18 sti~SWHPsePlfAVA~fS~er~GSVtIfad-tGEPqr~Vt~P-----~hatSLCWHpe~~vLa~gwe~g~~~v~~~~~~ 91 (1416)
T KOG3617|consen 18 STISSWHPSEPLFAVASFSPERGGSVTIFAD-TGEPQRDVTYP-----VHATSLCWHPEEFVLAQGWEMGVSDVQKTNTT 91 (1416)
T ss_pred ccccccCCCCceeEEEEecCCCCceEEEEec-CCCCCcccccc-----eehhhhccChHHHHHhhccccceeEEEecCCc
Confidence 345679999999998853 578988853 444322 1222 345679999 556778888999999999887
Q ss_pred eEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccC-CcEEEEEeccccc--ccEE--EEEECCCCCE------E
Q psy12614 102 NIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISD-EGLLYEKLLDRQQ--GRIL--CTAWHSSGDY------L 170 (708)
Q Consensus 102 ~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~-~~~~~~~~~~~~~--~~v~--~~~~s~d~~~------l 170 (708)
+.-.....|..+|..+.||++|..|.++..-|.+.+|.... |+... ..+-.|. ..++ +...++++.- .
T Consensus 92 e~htv~~th~a~i~~l~wS~~G~~l~t~d~~g~v~lwr~d~~g~~q~-~~~~~hel~~~ltl~cfRL~~~~Ee~~~laKa 170 (1416)
T KOG3617|consen 92 ETHTVVETHPAPIQGLDWSHDGTVLMTLDNPGSVHLWRYDVIGEIQT-SNIMQHELNDQLTLWCFRLSYDREEKFKLAKA 170 (1416)
T ss_pred eeeeeccCCCCCceeEEecCCCCeEEEcCCCceeEEEEeeecccccc-chhhhhHhhceeeEEEEecCCChHHhhhhhhh
Confidence 77777778999999999999999999999999999998873 33321 2233332 2233 3344666421 2
Q ss_pred EEecCC-eEE-EEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCeeEEEee
Q psy12614 171 VTGCAA-AVR-VWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDVK 241 (708)
Q Consensus 171 ~~~~~d-~i~-iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~~ 241 (708)
++.+.+ .+- .+++.....-+.... .=.|+|. ++.++.+|+|+..|- .|+.....+
T Consensus 171 aVtgDe~alD~~fnwk~~~a~rs~~k---------------sgv~~g~~F~~~~~~GtVyyvdq-~g~~~~V~k 228 (1416)
T KOG3617|consen 171 AVTGDESALDEPFNWKESLAERSDEK---------------SGVPKGTEFLFAGKSGTVYYVDQ-NGRQRTVHK 228 (1416)
T ss_pred hccCchhhhcccccCccchhhccccc---------------cCCCCCcEEEEEcCCceEEEEcC-CCcEEEEEE
Confidence 233333 333 444331111111110 1136775 888899999998883 455544443
|
|
| >PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A | Back alignment and domain information |
|---|
Probab=98.93 E-value=1.8e-06 Score=81.35 Aligned_cols=219 Identities=16% Similarity=0.129 Sum_probs=139.3
Q ss_pred CCCcEEEEECCCCeEeEEEeecCCceEEEE--EecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCC
Q psy12614 89 LQGFVNEYDMRRLNIKSSTAVTSGTCWCLS--VHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSS 166 (708)
Q Consensus 89 ~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~--~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d 166 (708)
.+|+|..||..+|+.+.....-. ...... ..+++..+++++.++.|..||..+|+......+....... . ..+
T Consensus 1 ~~g~l~~~d~~tG~~~W~~~~~~-~~~~~~~~~~~~~~~v~~~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~--~--~~~ 75 (238)
T PF13360_consen 1 DDGTLSALDPRTGKELWSYDLGP-GIGGPVATAVPDGGRVYVASGDGNLYALDAKTGKVLWRFDLPGPISGA--P--VVD 75 (238)
T ss_dssp -TSEEEEEETTTTEEEEEEECSS-SCSSEEETEEEETTEEEEEETTSEEEEEETTTSEEEEEEECSSCGGSG--E--EEE
T ss_pred CCCEEEEEECCCCCEEEEEECCC-CCCCccceEEEeCCEEEEEcCCCEEEEEECCCCCEEEEeeccccccce--e--eec
Confidence 36899999999999998886411 122222 3345667777789999999999999998766664332222 1 123
Q ss_pred CCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEEEEcCCCcEEEEeCCCCeeEEEeecccc
Q psy12614 167 GDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVKTHKK 245 (708)
Q Consensus 167 ~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~ 245 (708)
+..++.++.+ .+..+|..+|+.+.+........ ..........+. ++.++++..++.|..+|.++|+.+........
T Consensus 76 ~~~v~v~~~~~~l~~~d~~tG~~~W~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~g~l~~~d~~tG~~~w~~~~~~~ 153 (238)
T PF13360_consen 76 GGRVYVGTSDGSLYALDAKTGKVLWSIYLTSSPP-AGVRSSSSPAVD-GDRLYVGTSSGKLVALDPKTGKLLWKYPVGEP 153 (238)
T ss_dssp TTEEEEEETTSEEEEEETTTSCEEEEEEE-SSCT-CSTB--SEEEEE-TTEEEEEETCSEEEEEETTTTEEEEEEESSTT
T ss_pred ccccccccceeeeEecccCCcceeeeeccccccc-cccccccCceEe-cCEEEEEeccCcEEEEecCCCcEEEEeecCCC
Confidence 5556666666 99999999999998853221000 000111122222 44688888899999999999999877765332
Q ss_pred C----------eEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEE-EEEeCCE
Q psy12614 246 D----------ILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKS-LALHGNR 314 (708)
Q Consensus 246 ~----------i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~-l~~~~~~ 314 (708)
. +..-....++ .++.++.++.+..+|..+ |+ ..| ......+.. ....+..
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~g~~~~~d~~t--------g~----~~w------~~~~~~~~~~~~~~~~~ 214 (238)
T PF13360_consen 154 RGSSPISSFSDINGSPVISDG-RVYVSSGDGRVVAVDLAT--------GE----KLW------SKPISGIYSLPSVDGGT 214 (238)
T ss_dssp -SS--EEEETTEEEEEECCTT-EEEEECCTSSEEEEETTT--------TE----EEE------EECSS-ECECEECCCTE
T ss_pred CCCcceeeecccccceEEECC-EEEEEcCCCeEEEEECCC--------CC----EEE------EecCCCccCCceeeCCE
Confidence 2 1222222344 777787788644449988 63 112 111233333 3334888
Q ss_pred EEEEcCCCeEEEEeCCCCc
Q psy12614 315 LYSGGLDSYLSLSYYPPKT 333 (708)
Q Consensus 315 l~s~~~d~~i~iw~~~~~~ 333 (708)
|+.++.++.+..||+.+++
T Consensus 215 l~~~~~~~~l~~~d~~tG~ 233 (238)
T PF13360_consen 215 LYVTSSDGRLYALDLKTGK 233 (238)
T ss_dssp EEEEETTTEEEEEETTTTE
T ss_pred EEEEeCCCEEEEEECCCCC
Confidence 8888899999999998876
|
... |
| >PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species | Back alignment and domain information |
|---|
Probab=98.90 E-value=7.1e-06 Score=77.46 Aligned_cols=221 Identities=17% Similarity=0.051 Sum_probs=143.5
Q ss_pred EEEEec-CCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEEC-CCCCEEEEecCCeEEEEEcCCCceEEEEE
Q psy12614 116 CLSVHK-KKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWH-SSGDYLVTGCAAAVRVWDIHKGHAIHKMS 193 (708)
Q Consensus 116 ~~~~s~-~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s-~d~~~l~~~~~d~i~iwd~~~~~~~~~~~ 193 (708)
+++|.+ ++.++++-...+.|..|+..++.... ..+. . ...+++. +++ .|+.+..+.+.++|..+++......
T Consensus 4 gp~~d~~~g~l~~~D~~~~~i~~~~~~~~~~~~-~~~~---~-~~G~~~~~~~g-~l~v~~~~~~~~~d~~~g~~~~~~~ 77 (246)
T PF08450_consen 4 GPVWDPRDGRLYWVDIPGGRIYRVDPDTGEVEV-IDLP---G-PNGMAFDRPDG-RLYVADSGGIAVVDPDTGKVTVLAD 77 (246)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTTTEEEE-EESS---S-EEEEEEECTTS-EEEEEETTCEEEEETTTTEEEEEEE
T ss_pred ceEEECCCCEEEEEEcCCCEEEEEECCCCeEEE-EecC---C-CceEEEEccCC-EEEEEEcCceEEEecCCCcEEEEee
Confidence 578888 66666666678999999999887642 1221 2 6677777 665 4555555656666998886655555
Q ss_pred ecccCCCCCceeEEEEEEccCCEEEEEcCC---------CcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEE-Ee
Q psy12614 194 LDKSSKFSKNTAVWCVAFCADFTIITGDSG---------GFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYC-AG 263 (708)
Q Consensus 194 ~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d---------g~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~-~~ 263 (708)
..... ......+.+++.|+|++..+... |.|..++.. ++...... .-.....++|+|+++.|+. -+
T Consensus 78 ~~~~~--~~~~~~ND~~vd~~G~ly~t~~~~~~~~~~~~g~v~~~~~~-~~~~~~~~-~~~~pNGi~~s~dg~~lyv~ds 153 (246)
T PF08450_consen 78 LPDGG--VPFNRPNDVAVDPDGNLYVTDSGGGGASGIDPGSVYRIDPD-GKVTVVAD-GLGFPNGIAFSPDGKTLYVADS 153 (246)
T ss_dssp EETTC--SCTEEEEEEEE-TTS-EEEEEECCBCTTCGGSEEEEEEETT-SEEEEEEE-EESSEEEEEEETTSSEEEEEET
T ss_pred ccCCC--cccCCCceEEEcCCCCEEEEecCCCccccccccceEEECCC-CeEEEEec-CcccccceEECCcchheeeccc
Confidence 42111 12678899999999985554432 568888876 55443333 3566789999999998764 45
Q ss_pred cCCeEEEEEccCCcccccCCCCCCCCcceEEeEEE---eccccceEEEEEe--CCEEEEEcCCCeEEEEeCCCCceeecC
Q psy12614 264 VDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNR---VIHEGDVKSLALH--GNRLYSGGLDSYLSLSYYPPKTLVKYP 338 (708)
Q Consensus 264 ~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~---~~~~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~~~~~~~~ 338 (708)
..+.|..|++.. .. ..+.....+ ....+..-.+++. |++.++....+.|.+++.+...+..+.
T Consensus 154 ~~~~i~~~~~~~--------~~----~~~~~~~~~~~~~~~~g~pDG~~vD~~G~l~va~~~~~~I~~~~p~G~~~~~i~ 221 (246)
T PF08450_consen 154 FNGRIWRFDLDA--------DG----GELSNRRVFIDFPGGPGYPDGLAVDSDGNLWVADWGGGRIVVFDPDGKLLREIE 221 (246)
T ss_dssp TTTEEEEEEEET--------TT----CCEEEEEEEEE-SSSSCEEEEEEEBTTS-EEEEEETTTEEEEEETTSCEEEEEE
T ss_pred ccceeEEEeccc--------cc----cceeeeeeEEEcCCCCcCCCcceEcCCCCEEEEEcCCCEEEEECCCccEEEEEc
Confidence 678899999875 21 111111222 2222347788888 777777778899999999977677777
Q ss_pred ccCCCCceEEEE-cCCcEEEE
Q psy12614 339 CTLAQSTPVSLA-KDIQHVLL 358 (708)
Q Consensus 339 ~~~~~~~~~~~s-~~~~~l~~ 358 (708)
.+...+.+++|. ++.+.|..
T Consensus 222 ~p~~~~t~~~fgg~~~~~L~v 242 (246)
T PF08450_consen 222 LPVPRPTNCAFGGPDGKTLYV 242 (246)
T ss_dssp -SSSSEEEEEEESTTSSEEEE
T ss_pred CCCCCEEEEEEECCCCCEEEE
Confidence 565677888885 56555544
|
These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A .... |
| >PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function | Back alignment and domain information |
|---|
Probab=98.88 E-value=2.7e-06 Score=78.69 Aligned_cols=232 Identities=19% Similarity=0.216 Sum_probs=161.0
Q ss_pred CCcEEEEEEcC-CCCEEEEEeCCCc-EEEEeCCCCCeEE-------EEEecCCCCCcEEEEEEe--CCEEEEEc-----C
Q psy12614 26 PKVINCIACEP-KSSRLAVSRADQS-IEIWDISETPHVD-------RVFIGDPLSNSIECLTWF--NDRLFSGG-----L 89 (708)
Q Consensus 26 ~~~v~~~~~s~-~~~~la~~~~dg~-v~iwd~~~~~~~~-------~~~~~h~~~~~v~~l~~~--~~~l~s~~-----~ 89 (708)
+.....++.+| .+..+|.+..-|+ ..+||..+++.+. +.|.||. +|+ |++|++.- .
T Consensus 4 P~RgH~~a~~p~~~~avafaRRPG~~~~v~D~~~g~~~~~~~a~~gRHFyGHg--------~fs~dG~~LytTEnd~~~g 75 (305)
T PF07433_consen 4 PARGHGVAAHPTRPEAVAFARRPGTFALVFDCRTGQLLQRLWAPPGRHFYGHG--------VFSPDGRLLYTTENDYETG 75 (305)
T ss_pred CccccceeeCCCCCeEEEEEeCCCcEEEEEEcCCCceeeEEcCCCCCEEecCE--------EEcCCCCEEEEeccccCCC
Confidence 44556789999 5566788877665 7889999988765 2344444 788 88888774 4
Q ss_pred CCcEEEEECC-CCeEeEEEeecCCceEEEEEecCCCEEEEEeC------------------CCcEEEEEccCCcEEEEEe
Q psy12614 90 QGFVNEYDMR-RLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTE------------------QGHINLFQISDEGLLYEKL 150 (708)
Q Consensus 90 d~~i~vwd~~-~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~------------------d~~i~iwd~~~~~~~~~~~ 150 (708)
.|.|-|||.. +.+.+..+..|.-.-..+.+.|||+.|+++.. +-++...|..+|+++.+..
T Consensus 76 ~G~IgVyd~~~~~~ri~E~~s~GIGPHel~l~pDG~tLvVANGGI~Thpd~GR~kLNl~tM~psL~~ld~~sG~ll~q~~ 155 (305)
T PF07433_consen 76 RGVIGVYDAARGYRRIGEFPSHGIGPHELLLMPDGETLVVANGGIETHPDSGRAKLNLDTMQPSLVYLDARSGALLEQVE 155 (305)
T ss_pred cEEEEEEECcCCcEEEeEecCCCcChhhEEEcCCCCEEEEEcCCCccCcccCceecChhhcCCceEEEecCCCceeeeee
Confidence 5889999999 66788888888878888999999988877531 2346677888898887667
Q ss_pred c--ccccccEEEEEECCCCCEEEEecCC--------eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-E-E
Q psy12614 151 L--DRQQGRILCTAWHSSGDYLVTGCAA--------AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-I-I 218 (708)
Q Consensus 151 ~--~~~~~~v~~~~~s~d~~~l~~~~~d--------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l-~ 218 (708)
+ .-|...+..+++.++|..++..-.. -+.+++ .++.+..+.........-...+-+|++++++. + +
T Consensus 156 Lp~~~~~lSiRHLa~~~~G~V~~a~Q~qg~~~~~~PLva~~~--~g~~~~~~~~p~~~~~~l~~Y~gSIa~~~~g~~ia~ 233 (305)
T PF07433_consen 156 LPPDLHQLSIRHLAVDGDGTVAFAMQYQGDPGDAPPLVALHR--RGGALRLLPAPEEQWRRLNGYIGSIAADRDGRLIAV 233 (305)
T ss_pred cCccccccceeeEEecCCCcEEEEEecCCCCCccCCeEEEEc--CCCcceeccCChHHHHhhCCceEEEEEeCCCCEEEE
Confidence 7 4478899999999999766654321 244444 33333333332100001156788999999985 4 3
Q ss_pred EEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEE
Q psy12614 219 TGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCF 271 (708)
Q Consensus 219 ~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw 271 (708)
++=..|.+.+||..+++.+....- ..+..++..+++ ++++.+ .|.+...
T Consensus 234 tsPrGg~~~~~d~~tg~~~~~~~l--~D~cGva~~~~~-f~~ssG-~G~~~~~ 282 (305)
T PF07433_consen 234 TSPRGGRVAVWDAATGRLLGSVPL--PDACGVAPTDDG-FLVSSG-QGQLIRL 282 (305)
T ss_pred ECCCCCEEEEEECCCCCEeecccc--CceeeeeecCCc-eEEeCC-CccEEEc
Confidence 444578899999999998877653 556778877777 555554 3544333
|
|
| >PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal | Back alignment and domain information |
|---|
Probab=98.87 E-value=3.2e-06 Score=75.62 Aligned_cols=209 Identities=7% Similarity=0.003 Sum_probs=114.3
Q ss_pred ccCCCCceEEEEcCCcEEEEE-cCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCC---
Q psy12614 339 CTLAQSTPVSLAKDIQHVLLQ-YTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSND--- 414 (708)
Q Consensus 339 ~~~~~~~~~~~s~~~~~l~~~-~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~--- 414 (708)
++.++-+.++||||+.+++.+ ..|.|++||+.......+.... .........|..+.|-+.
T Consensus 41 D~~PQWRkl~WSpD~tlLa~a~S~G~i~vfdl~g~~lf~I~p~~---------------~~~~d~~~Aiagl~Fl~~~~s 105 (282)
T PF15492_consen 41 DPNPQWRKLAWSPDCTLLAYAESTGTIRVFDLMGSELFVIPPAM---------------SFPGDLSDAIAGLIFLEYKKS 105 (282)
T ss_pred CCCchheEEEECCCCcEEEEEcCCCeEEEEecccceeEEcCccc---------------ccCCccccceeeeEeeccccc
Confidence 456677889999999999986 7899999998864420000000 000112234455544332
Q ss_pred ----CcEEEEEcCCceEEEEEEecCCcceeEEeec--CCcccccceeEEEEEecCCCeEEEEecCCc---EEEecCCCeE
Q psy12614 415 ----GKYVAYSTESCVRLHSLDLDGDKPQISRIKN--LPAPLFKSIFTHVLISADSTLLLAVSLNGP---LYIIDLSSLE 485 (708)
Q Consensus 415 ----g~~l~~~~d~~i~i~~~~~~~~~~~~~~~~~--~~~~~~~~~i~~~~~s~d~~~l~~~~~dg~---i~~~~~~~~~ 485 (708)
..+|+....|.++-|-+..+..+ .++..+. +..|. ...|+++.++|..++|++++.... .......
T Consensus 106 ~~ws~ELlvi~Y~G~L~Sy~vs~gt~q-~y~e~hsfsf~~~y-p~Gi~~~vy~p~h~LLlVgG~~~~~~~~s~a~~~--- 180 (282)
T PF15492_consen 106 AQWSYELLVINYRGQLRSYLVSVGTNQ-GYQENHSFSFSSHY-PHGINSAVYHPKHRLLLVGGCEQNQDGMSKASSC--- 180 (282)
T ss_pred cccceeEEEEeccceeeeEEEEcccCC-cceeeEEEEecccC-CCceeEEEEcCCCCEEEEeccCCCCCcccccccc---
Confidence 24556677888888887542111 1222111 22222 557888999999999988875443 1111000
Q ss_pred EEEEecCCCCCccCcceEEEEECCCCcEEEEEecCCeEEEEECCce--eeecCCCCCCceEEEEcCCCCEEEEEecCCcE
Q psy12614 486 IKYCVDPYKSNLMSDVISLVQMSECKQYIVCADRKSHVVIWKNGQH--HASLPRYRKPSTAMAIHPTLSTLVTVYSDHRI 563 (708)
Q Consensus 486 ~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~--~~~~~~~~~~v~~l~~s~d~~~l~~~~~dg~i 563 (708)
-+.......+. +-.....+.+...-...... .+|.+... ..........|..|..||||+.||+...+|.|
T Consensus 181 GLtaWRiL~~~----Pyyk~v~~~~~~~~~~~~~~---~~~~~~~~~~fs~~~~~~d~i~kmSlSPdg~~La~ih~sG~l 253 (282)
T PF15492_consen 181 GLTAWRILSDS----PYYKQVTSSEDDITASSKRR---GLLRIPSFKFFSRQGQEQDGIFKMSLSPDGSLLACIHFSGSL 253 (282)
T ss_pred CceEEEEcCCC----CcEEEccccCcccccccccc---ceeeccceeeeeccccCCCceEEEEECCCCCEEEEEEcCCeE
Confidence 01111111110 00000111111111111112 23333321 11223456789999999999999999999999
Q ss_pred EEEEcCCCCCC
Q psy12614 564 VEFDLNRKAFT 574 (708)
Q Consensus 564 ~vwd~~~~~~~ 574 (708)
.+|+++.-...
T Consensus 254 sLW~iPsL~~~ 264 (282)
T PF15492_consen 254 SLWEIPSLRLQ 264 (282)
T ss_pred EEEecCcchhh
Confidence 99999986654
|
|
| >KOG2066|consensus | Back alignment and domain information |
|---|
Probab=98.82 E-value=1.6e-07 Score=95.01 Aligned_cols=188 Identities=13% Similarity=0.147 Sum_probs=141.1
Q ss_pred CCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEeCCEEEEEcCCCcEEEEECCCCeEeE
Q psy12614 26 PKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWFNDRLFSGGLQGFVNEYDMRRLNIKS 105 (708)
Q Consensus 26 ~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~~~~l~s~~~d~~i~vwd~~~~~~~~ 105 (708)
.+.++|++++ ++.+|.|+.+|.|.+.+.+... . ....|. .. .-.|.++++|+.||+|.|-.+-+.+...
T Consensus 39 ~D~is~~av~--~~~~~~GtH~g~v~~~~~~~~~--~-~~~~~s--~~----~~~Gey~asCS~DGkv~I~sl~~~~~~~ 107 (846)
T KOG2066|consen 39 NDAISCCAVH--DKFFALGTHRGAVYLTTCQGNP--K-TNFDHS--SS----ILEGEYVASCSDDGKVVIGSLFTDDEIT 107 (846)
T ss_pred hhHHHHHHhh--cceeeeccccceEEEEecCCcc--c-cccccc--cc----ccCCceEEEecCCCcEEEeeccCCccce
Confidence 4678888887 6789999999999999987643 2 344444 22 1229999999999999999999888777
Q ss_pred EEeecCCceEEEEEecC-----CCEEEEEeCCCcEEEEEcc--CCcEEEEEecccccccEEEEEECCCCCEEEEecCCeE
Q psy12614 106 STAVTSGTCWCLSVHKK-----KRLLAAGTEQGHINLFQIS--DEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAAAV 178 (708)
Q Consensus 106 ~~~~~~~~v~~~~~s~~-----~~~la~~~~d~~i~iwd~~--~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~i 178 (708)
++.-+ .++.+++++|| .+.+++|+..| +.++.-. +.+.. ..+....|+|.++.|. |+++|-++...|
T Consensus 108 ~~df~-rpiksial~Pd~~~~~sk~fv~GG~ag-lvL~er~wlgnk~~--v~l~~~eG~I~~i~W~--g~lIAWand~Gv 181 (846)
T KOG2066|consen 108 QYDFK-RPIKSIALHPDFSRQQSKQFVSGGMAG-LVLSERNWLGNKDS--VVLSEGEGPIHSIKWR--GNLIAWANDDGV 181 (846)
T ss_pred eEecC-CcceeEEeccchhhhhhhheeecCcce-EEEehhhhhcCccc--eeeecCccceEEEEec--CcEEEEecCCCc
Confidence 66644 68999999998 56788998888 7777533 22221 2355567899999997 778888887799
Q ss_pred EEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEEEEcCCCcEEEEeCC
Q psy12614 179 RVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGK 232 (708)
Q Consensus 179 ~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~wd~~ 232 (708)
+++|..+++.+..+..++... ..+.....+.|.++.+++.|-.| +|++..++
T Consensus 182 ~vyd~~~~~~l~~i~~p~~~~-R~e~fpphl~W~~~~~LVIGW~d-~v~i~~I~ 233 (846)
T KOG2066|consen 182 KVYDTPTRQRLTNIPPPSQSV-RPELFPPHLHWQDEDRLVIGWGD-SVKICSIK 233 (846)
T ss_pred EEEeccccceeeccCCCCCCC-CcccCCCceEecCCCeEEEecCC-eEEEEEEe
Confidence 999999999888887664222 22344567889888888887765 57777776
|
|
| >PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function | Back alignment and domain information |
|---|
Probab=98.82 E-value=1.3e-05 Score=74.26 Aligned_cols=217 Identities=14% Similarity=0.106 Sum_probs=142.1
Q ss_pred CEEEEEcCCCc-EEEEECCCCeEeEEEeecCCceE--EEEEecCCCEEEEEeC-----CCcEEEEEccCCcEEEEEeccc
Q psy12614 82 DRLFSGGLQGF-VNEYDMRRLNIKSSTAVTSGTCW--CLSVHKKKRLLAAGTE-----QGHINLFQISDEGLLYEKLLDR 153 (708)
Q Consensus 82 ~~l~s~~~d~~-i~vwd~~~~~~~~~~~~~~~~v~--~~~~s~~~~~la~~~~-----d~~i~iwd~~~~~~~~~~~~~~ 153 (708)
..++.+-.-|+ ..+||..+++....+....+.-. .-+||+||++|++.-. .|.|-|||...+ ......+..
T Consensus 18 ~avafaRRPG~~~~v~D~~~g~~~~~~~a~~gRHFyGHg~fs~dG~~LytTEnd~~~g~G~IgVyd~~~~-~~ri~E~~s 96 (305)
T PF07433_consen 18 EAVAFARRPGTFALVFDCRTGQLLQRLWAPPGRHFYGHGVFSPDGRLLYTTENDYETGRGVIGVYDAARG-YRRIGEFPS 96 (305)
T ss_pred eEEEEEeCCCcEEEEEEcCCCceeeEEcCCCCCEEecCEEEcCCCCEEEEeccccCCCcEEEEEEECcCC-cEEEeEecC
Confidence 34444444443 56788888887766654333222 3679999999988533 588999999932 222366776
Q ss_pred ccccEEEEEECCCCCEEEEecCC-------------------eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccC
Q psy12614 154 QQGRILCTAWHSSGDYLVTGCAA-------------------AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCAD 214 (708)
Q Consensus 154 ~~~~v~~~~~s~d~~~l~~~~~d-------------------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 214 (708)
+.-.-..+.+.|||+.|+++... .+...|..+|+.+.+.......+ ...+..+++.++
T Consensus 97 ~GIGPHel~l~pDG~tLvVANGGI~Thpd~GR~kLNl~tM~psL~~ld~~sG~ll~q~~Lp~~~~---~lSiRHLa~~~~ 173 (305)
T PF07433_consen 97 HGIGPHELLLMPDGETLVVANGGIETHPDSGRAKLNLDTMQPSLVYLDARSGALLEQVELPPDLH---QLSIRHLAVDGD 173 (305)
T ss_pred CCcChhhEEEcCCCCEEEEEcCCCccCcccCceecChhhcCCceEEEecCCCceeeeeecCcccc---ccceeeEEecCC
Confidence 66666788899999888776432 26677888999988877643323 778999999999
Q ss_pred CEEEEEcC-CC-------cEEEEeCCCCeeEEEe-------eccccCeEEEEEeCCCCEEEEEe-cCCeEEEEEccCCcc
Q psy12614 215 FTIITGDS-GG-------FVRFWDGKTGVQWSDV-------KTHKKDILALTVSEDENYLYCAG-VDPTVVCFQRTRKPQ 278 (708)
Q Consensus 215 ~~l~~~~~-dg-------~i~~wd~~~~~~~~~~-------~~~~~~i~~~~~s~~~~~l~~~~-~dg~i~iw~~~~~~~ 278 (708)
|.++.+.. .| -|.+++. ++.+..+ ......+-++++++++..+++.+ ..+.+.+||..+
T Consensus 174 G~V~~a~Q~qg~~~~~~PLva~~~~--g~~~~~~~~p~~~~~~l~~Y~gSIa~~~~g~~ia~tsPrGg~~~~~d~~t--- 248 (305)
T PF07433_consen 174 GTVAFAMQYQGDPGDAPPLVALHRR--GGALRLLPAPEEQWRRLNGYIGSIAADRDGRLIAVTSPRGGRVAVWDAAT--- 248 (305)
T ss_pred CcEEEEEecCCCCCccCCeEEEEcC--CCcceeccCChHHHHhhCCceEEEEEeCCCCEEEEECCCCCEEEEEECCC---
Confidence 98665543 22 2444443 3323222 23457899999999998876554 567899999998
Q ss_pred cccCCCCCCCCcceEEeEEEeccccceEEEEEe-CCEEEEEcCCC
Q psy12614 279 VCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH-GNRLYSGGLDS 322 (708)
Q Consensus 279 ~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~-~~~l~s~~~d~ 322 (708)
|. .+. ...-..+..++.. +.++++.+...
T Consensus 249 -----g~--------~~~--~~~l~D~cGva~~~~~f~~ssG~G~ 278 (305)
T PF07433_consen 249 -----GR--------LLG--SVPLPDACGVAPTDDGFLVSSGQGQ 278 (305)
T ss_pred -----CC--------Eee--ccccCceeeeeecCCceEEeCCCcc
Confidence 64 111 1223456666666 45555555433
|
|
| >KOG3617|consensus | Back alignment and domain information |
|---|
Probab=98.81 E-value=1.9e-07 Score=94.67 Aligned_cols=233 Identities=16% Similarity=0.194 Sum_probs=138.2
Q ss_pred cEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECCCCeEeE
Q psy12614 28 VINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMRRLNIKS 105 (708)
Q Consensus 28 ~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~~~~~ 105 (708)
.+++++|+|..-.||.|.+-|.+.+|...+.+.-. ....|. .+|..+.|| |..|+++..-|.+.+|.......+.
T Consensus 61 hatSLCWHpe~~vLa~gwe~g~~~v~~~~~~e~ht-v~~th~--a~i~~l~wS~~G~~l~t~d~~g~v~lwr~d~~g~~q 137 (1416)
T KOG3617|consen 61 HATSLCWHPEEFVLAQGWEMGVSDVQKTNTTETHT-VVETHP--APIQGLDWSHDGTVLMTLDNPGSVHLWRYDVIGEIQ 137 (1416)
T ss_pred ehhhhccChHHHHHhhccccceeEEEecCCceeee-eccCCC--CCceeEEecCCCCeEEEcCCCceeEEEEeeeccccc
Confidence 46789999999999999999999999998866544 677788 999999999 9999999999999999876432222
Q ss_pred EE--eecC----CceEEEEEecCCC------EEEEEeCCCcEE-EEEccCCcEEEEEecccccccEEEEEECCCCCEEEE
Q psy12614 106 ST--AVTS----GTCWCLSVHKKKR------LLAAGTEQGHIN-LFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVT 172 (708)
Q Consensus 106 ~~--~~~~----~~v~~~~~s~~~~------~la~~~~d~~i~-iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~ 172 (708)
.. -.|. -..+|...++++. ..++.+++..+- .+++...... .... |. =.|+|..++.
T Consensus 138 ~~~~~~hel~~~ltl~cfRL~~~~Ee~~~laKaaVtgDe~alD~~fnwk~~~a~--rs~~-ks-------gv~~g~~F~~ 207 (1416)
T KOG3617|consen 138 TSNIMQHELNDQLTLWCFRLSYDREEKFKLAKAAVTGDESALDEPFNWKESLAE--RSDE-KS-------GVPKGTEFLF 207 (1416)
T ss_pred cchhhhhHhhceeeEEEEecCCChHHhhhhhhhhccCchhhhcccccCccchhh--cccc-cc-------CCCCCcEEEE
Confidence 21 1221 2345666677743 234444444443 4444321111 1111 11 1367777777
Q ss_pred ecCC-eEEEEEcCCCceEEEEEecccCC--C-CCceeEEEE-EEc--------cCCE---E----E---EEcCCCcEEEE
Q psy12614 173 GCAA-AVRVWDIHKGHAIHKMSLDKSSK--F-SKNTAVWCV-AFC--------ADFT---I----I---TGDSGGFVRFW 229 (708)
Q Consensus 173 ~~~d-~i~iwd~~~~~~~~~~~~~~~~~--~-~~~~~v~~~-~~~--------~~~~---l----~---~~~~dg~i~~w 229 (708)
++.+ +|+-.| ++|++....+....-. | +....|.++ .+. +.|. + + .|+..|.|.+=
T Consensus 208 ~~~~GtVyyvd-q~g~~~~V~k~dS~vQmLf~~~~eai~~i~e~lr~~l~~v~~~G~~ee~~~vk~sgk~GgrqGgiA~s 286 (1416)
T KOG3617|consen 208 AGKSGTVYYVD-QNGRQRTVHKLDSEVQMLFMGYCEAISIIIEFLRDCLIFVLAKGTSEERCAVKVSGKLGGRQGGIACS 286 (1416)
T ss_pred EcCCceEEEEc-CCCcEEEEEEccchHHHHHhcccceEEEEeeeceeeEEEecCCCchHHhhhhhhccccCCccCccccc
Confidence 7777 777776 4555555444332100 0 001112211 111 1221 0 0 22333333332
Q ss_pred eCCCCeeEE--Ee-eccccCeEEEEEeCCCCEEEEEecCCeEEEEEccC
Q psy12614 230 DGKTGVQWS--DV-KTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTR 275 (708)
Q Consensus 230 d~~~~~~~~--~~-~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~ 275 (708)
.. .|-... .+ ......++|++++..+.+|..|...|.+.+|.-..
T Consensus 287 Es-sGvLr~~eKyg~e~ge~~~c~cY~~~~~~l~agt~~gnv~~w~~v~ 334 (1416)
T KOG3617|consen 287 ES-SGVLRKSEKYGLELGEGILCMCYGEKEIRLWAGTKEGNVTIWLDVN 334 (1416)
T ss_pred cc-cccccCCcchhhhcCCceEEEEEeccceEEEecccCCcEEEeeecC
Confidence 21 121000 00 12356899999999999999999999999997554
|
|
| >KOG1832|consensus | Back alignment and domain information |
|---|
Probab=98.79 E-value=3.2e-09 Score=107.59 Aligned_cols=218 Identities=16% Similarity=0.201 Sum_probs=159.5
Q ss_pred eeeeeeccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCC--
Q psy12614 16 VHNIKFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQG-- 91 (708)
Q Consensus 16 ~~~~~~~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~-- 91 (708)
.+..+.|+.|...-+|++|+-+.+.|++|+..|.|+++++.+|.... ...+|. .+|+.+.-+ |..+++.+.-.
T Consensus 1091 Fr~w~~frd~~~~fTc~afs~~~~hL~vG~~~Geik~~nv~sG~~e~-s~ncH~--SavT~vePs~dgs~~Ltsss~S~P 1167 (1516)
T KOG1832|consen 1091 FRSWRSFRDETALFTCIAFSGGTNHLAVGSHAGEIKIFNVSSGSMEE-SVNCHQ--SAVTLVEPSVDGSTQLTSSSSSSP 1167 (1516)
T ss_pred cccchhhhccccceeeEEeecCCceEEeeeccceEEEEEccCccccc-cccccc--cccccccccCCcceeeeeccccCc
Confidence 34556788999999999999999999999999999999999998877 889999 999999988 76666554433
Q ss_pred cEEEEECCC-CeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEe-ccc---ccccEEEEEECCC
Q psy12614 92 FVNEYDMRR-LNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKL-LDR---QQGRILCTAWHSS 166 (708)
Q Consensus 92 ~i~vwd~~~-~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~-~~~---~~~~v~~~~~s~d 166 (708)
-..+|++.+ +.+.+++.+ -.++.|+.....-+.|+......+||++++... .+ +.+ ....-.+..|+|+
T Consensus 1168 lsaLW~~~s~~~~~Hsf~e----d~~vkFsn~~q~r~~gt~~d~a~~YDvqT~~~l--~tylt~~~~~~y~~n~a~FsP~ 1241 (1516)
T KOG1832|consen 1168 LSALWDASSTGGPRHSFDE----DKAVKFSNSLQFRALGTEADDALLYDVQTCSPL--QTYLTDTVTSSYSNNLAHFSPC 1241 (1516)
T ss_pred hHHHhccccccCccccccc----cceeehhhhHHHHHhcccccceEEEecccCcHH--HHhcCcchhhhhhccccccCCC
Confidence 578999875 455555543 457888887655566666677899999998754 22 221 2223367889999
Q ss_pred CCEEEEecCCeEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCeeEEEeecccc
Q psy12614 167 GDYLVTGCAAAVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDVKTHKK 245 (708)
Q Consensus 167 ~~~l~~~~~d~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~~~~~~ 245 (708)
.++++--+ .+||++..+.++.+... ..--.-.|+|.|. ++.-+ -|||+++.+.+...+...
T Consensus 1242 D~LIlndG----vLWDvR~~~aIh~FD~f--------t~~~~G~FHP~g~eVIINS-----EIwD~RTF~lLh~VP~Ld- 1303 (1516)
T KOG1832|consen 1242 DTLILNDG----VLWDVRIPEAIHRFDQF--------TDYGGGGFHPSGNEVIINS-----EIWDMRTFKLLHSVPSLD- 1303 (1516)
T ss_pred cceEeeCc----eeeeeccHHHHhhhhhh--------eecccccccCCCceEEeec-----hhhhhHHHHHHhcCcccc-
Confidence 88776432 58999888777766532 1122336889985 55443 389999998887776432
Q ss_pred CeEEEEEeCCCCEEEE
Q psy12614 246 DILALTVSEDENYLYC 261 (708)
Q Consensus 246 ~i~~~~~s~~~~~l~~ 261 (708)
-..+.|+..|+.++.
T Consensus 1304 -qc~VtFNstG~VmYa 1318 (1516)
T KOG1832|consen 1304 -QCAVTFNSTGDVMYA 1318 (1516)
T ss_pred -ceEEEeccCccchhh
Confidence 357888888876653
|
|
| >KOG1897|consensus | Back alignment and domain information |
|---|
Probab=98.73 E-value=0.00064 Score=71.61 Aligned_cols=523 Identities=10% Similarity=0.029 Sum_probs=266.3
Q ss_pred CCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeE----EEEEecCCCCCcEEEEEEe------CCEEEEEc---CC
Q psy12614 24 PEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHV----DRVFIGDPLSNSIECLTWF------NDRLFSGG---LQ 90 (708)
Q Consensus 24 ~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~----~~~~~~h~~~~~v~~l~~~------~~~l~s~~---~d 90 (708)
+..+-..|+.+-++| .|.+|+.-|.=.+-.+.+..-. . .++.-.--++|..++.. +..+++++ .|
T Consensus 304 ge~siassi~~L~ng-~lFvGS~~gdSqLi~L~~e~d~gsy~~-ilet~~NLgPI~Dm~Vvd~d~q~q~qivtCsGa~kd 381 (1096)
T KOG1897|consen 304 GETSIASSINYLDNG-VLFVGSRFGDSQLIKLNTEPDVGSYVV-ILETFVNLGPIVDMCVVDLDRQGQGQIVTCSGAFKD 381 (1096)
T ss_pred CCcchhhhhhcccCc-eEEEeccCCceeeEEccccCCCCchhh-hhhhcccccceeeEEEEeccccCCceEEEEeCCCCC
Confidence 444555666666665 6778877766566555542211 1 11111112688888876 34566654 58
Q ss_pred CcEEEEECCCCeE---eEEEeecCCceEEEE--EecC-CCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEEC
Q psy12614 91 GFVNEYDMRRLNI---KSSTAVTSGTCWCLS--VHKK-KRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWH 164 (708)
Q Consensus 91 ~~i~vwd~~~~~~---~~~~~~~~~~v~~~~--~s~~-~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s 164 (708)
|++++..-.-+-. ...+.+ -..++.+. ++++ .++|+.+-.+ .-++..+... .. .....+.......+..|
T Consensus 382 gSLRiiRngi~I~e~A~i~l~G-ikg~w~lk~~v~~~~d~ylvlsf~~-eTrvl~i~~e-~e-e~~~~gf~~~~~Tif~S 457 (1096)
T KOG1897|consen 382 GSLRIIRNGIGIDELASIDLPG-IKGMWSLKSMVDENYDNYLVLSFIS-ETRVLNISEE-VE-ETEDPGFSTDEQTIFCS 457 (1096)
T ss_pred CcEEEEecccccceeeEeecCC-ccceeEeeccccccCCcEEEEEecc-ceEEEEEccc-eE-EeccccccccCceEEEE
Confidence 9999986443321 112333 24566766 4332 2356554433 3355555433 22 12233333333333333
Q ss_pred -CCCCEEEEecCCeEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCC-EEEEEcCCCcEEEEeCCCCeeEEE-ee
Q psy12614 165 -SSGDYLVTGCAAAVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADF-TIITGDSGGFVRFWDGKTGVQWSD-VK 241 (708)
Q Consensus 165 -~d~~~l~~~~~d~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~~~~~dg~i~~wd~~~~~~~~~-~~ 241 (708)
-.++.|+=...+.|++++-. .....+.. ...++....+.+. +++.++.++.+...++..+..... -.
T Consensus 458 ~i~g~~lvQvTs~~iRl~ss~--~~~~~W~~--------p~~~ti~~~~~n~sqVvvA~~~~~l~y~~i~~~~l~e~~~~ 527 (1096)
T KOG1897|consen 458 TINGNQLVQVTSNSIRLVSSA--GLRSEWRP--------PGKITIGVVSANASQVVVAGGGLALFYLEIEDGGLREVSHK 527 (1096)
T ss_pred ccCCceEEEEecccEEEEcch--hhhhcccC--------CCceEEEEEeecceEEEEecCccEEEEEEeeccceeeeeeh
Confidence 23455666666678888754 22333332 2223333333333 688888888888888776652222 12
Q ss_pred ccccCeEEEEEeCCC------CEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEE---EEe-
Q psy12614 242 THKKDILALTVSEDE------NYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSL---ALH- 311 (708)
Q Consensus 242 ~~~~~i~~~~~s~~~------~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l---~~~- 311 (708)
.....|.|+.++|-| +.++.|..+..+.+.-.... .. ........-..-.+++ ++.
T Consensus 528 ~~e~evaCLDisp~~d~~~~s~~~aVG~Ws~~~~~l~~~pd-------~~-------~~~~~~l~~~~iPRSIl~~~~e~ 593 (1096)
T KOG1897|consen 528 EFEYEVACLDISPLGDAPNKSRLLAVGLWSDISMILTFLPD-------LI-------LITHEQLSGEIIPRSILLTTFEG 593 (1096)
T ss_pred eecceeEEEecccCCCCCCcceEEEEEeecceEEEEEECCC-------cc-------eeeeeccCCCccchheeeEEeec
Confidence 245789999998743 36777776665544433220 10 0011101111112233 232
Q ss_pred -CCEEEEEcCCCeEEEEeCCCCc--eeecCc---cCCCCceEEEEcC-CcEEEEEcCCeEEEEEecCCCCCCCCCCCCCC
Q psy12614 312 -GNRLYSGGLDSYLSLSYYPPKT--LVKYPC---TLAQSTPVSLAKD-IQHVLLQYTSHLELWSLGSAQSTDLSSHSNTT 384 (708)
Q Consensus 312 -~~~l~s~~~d~~i~iw~~~~~~--~~~~~~---~~~~~~~~~~s~~-~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~~~ 384 (708)
..+|.++..||.+..+-++... +..... ...++.--.|+.. +..+.+.+|.-.-+|....
T Consensus 594 d~~yLlvalgdG~l~~fv~d~~tg~lsd~Kk~~lGt~P~~Lr~f~sk~~t~vfa~sdrP~viY~~n~------------- 660 (1096)
T KOG1897|consen 594 DIHYLLVALGDGALLYFVLDINTGQLSDRKKVTLGTQPISLRTFSSKSRTAVFALSDRPTVIYSSNG------------- 660 (1096)
T ss_pred cceEEEEEcCCceEEEEEEEcccceEccccccccCCCCcEEEEEeeCCceEEEEeCCCCEEEEecCC-------------
Confidence 5789999999998877655433 222110 1112222334333 3344445555555554333
Q ss_pred cccCCCCceEEEEEE--ecCCCceEEEEeCC--CCcEEEEEcCCceEEEEEEecCCcceeEEeecCCcccccceeEEEEE
Q psy12614 385 GVPLLSFPRLIVKMS--AVNNATIRCSVVSN--DGKYVAYSTESCVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVLI 460 (708)
Q Consensus 385 ~~~~~~~~~~~~~~~--~~~~~~i~~~~~s~--~g~~l~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 460 (708)
++.-.. .+.-..+ +.|+. -...++.++.+.+++..++.-+ ++..++ +|-+..... +++
T Consensus 661 ---------kLv~spls~kev~~~--c~f~s~a~~d~l~~~~~~~l~i~tid~iq-kl~irt---vpl~~~prr---I~~ 722 (1096)
T KOG1897|consen 661 ---------KLVYSPLSLKEVNHM--CPFNSDAYPDSLASANGGALTIGTIDEIQ-KLHIRT---VPLGESPRR---ICY 722 (1096)
T ss_pred ---------cEEEeccchHHhhhh--cccccccCCceEEEecCCceEEEEecchh-hcceee---ecCCCChhh---eEe
Confidence 111111 1111111 12222 2345777778888888877421 223333 444433334 677
Q ss_pred ecCCCeEEEEecCCc--------------EEEecCCCeEEEEEecCCCCCccCcceEEEEECCC-CcEEEEEe-------
Q psy12614 461 SADSTLLLAVSLNGP--------------LYIIDLSSLEIKYCVDPYKSNLMSDVISLVQMSEC-KQYIVCAD------- 518 (708)
Q Consensus 461 s~d~~~l~~~~~dg~--------------i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~-~~~l~~~~------- 518 (708)
.+....+++.+.... +..++..+.+.+...+-.+. +....|.+..|..| +.++++|.
T Consensus 723 q~~sl~~~v~s~r~e~~~~~~~ee~~~s~l~vlD~nTf~vl~~hef~~~-E~~~Si~s~~~~~d~~t~~vVGT~~v~Pde 801 (1096)
T KOG1897|consen 723 QESSLTFGVLSNRIESSAEYYGEEYEVSFLRVLDQNTFEVLSSHEFERN-ETALSIISCKFTDDPNTYYVVGTGLVYPDE 801 (1096)
T ss_pred cccceEEEEEecccccchhhcCCcceEEEEEEecCCceeEEeecccccc-ceeeeeeeeeecCCCceEEEEEEEeeccCC
Confidence 764444544432221 22333333333322221110 01234555558877 78888875
Q ss_pred ---cCCeEEEEECCceee-e---cCCCCCCceEEEEcCCCCEEEEEecCCcEEEEEcCCCCCCchhhhhhccCchhhhcC
Q psy12614 519 ---RKSHVVIWKNGQHHA-S---LPRYRKPSTAMAIHPTLSTLVTVYSDHRIVEFDLNRKAFTTFSRKLETNHPNEWLSR 591 (708)
Q Consensus 519 ---~d~~i~iw~~~~~~~-~---~~~~~~~v~~l~~s~d~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~ 591 (708)
..|.|.|+.+.+... + -..-.+.+.++..- +|++||. -+..|++|++.+++.. +.-..+
T Consensus 802 ~ep~~GRIivfe~~e~~~L~~v~e~~v~Gav~aL~~f-ngkllA~--In~~vrLye~t~~~eL-----------r~e~~~ 867 (1096)
T KOG1897|consen 802 NEPVNGRIIVFEFEELNSLELVAETVVKGAVYALVEF-NGKLLAG--INQSVRLYEWTTEREL-----------RIECNI 867 (1096)
T ss_pred CCcccceEEEEEEecCCceeeeeeeeeccceeehhhh-CCeEEEe--cCcEEEEEEcccccee-----------hhhhcc
Confidence 247888888875111 1 11123455555432 5777664 4567999999988544 233357
Q ss_pred CCCeeEEEeCCCCCceEEEEcCeeEEEEecC
Q psy12614 592 QLPVLGIEFDPQDSSLIYLMDDSALCVINKN 622 (708)
Q Consensus 592 ~~~i~~l~~s~~~~~l~~~~~d~~i~~wd~~ 622 (708)
..++..+...-.|..+++|+--+.+.+--..
T Consensus 868 ~~~~~aL~l~v~gdeI~VgDlm~Sitll~y~ 898 (1096)
T KOG1897|consen 868 SNPIIALDLQVKGDEIAVGDLMRSITLLQYK 898 (1096)
T ss_pred cCCeEEEEEEecCcEEEEeeccceEEEEEEe
Confidence 7788889888899999999876666554443
|
|
| >KOG1645|consensus | Back alignment and domain information |
|---|
Probab=98.70 E-value=2e-06 Score=80.08 Aligned_cols=254 Identities=17% Similarity=0.217 Sum_probs=153.3
Q ss_pred cceeeeeeeeccCCCCcEEEEEEcCCCC-EEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe---CCEEEEE
Q psy12614 12 GTYGVHNIKFYAPEPKVINCIACEPKSS-RLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF---NDRLFSG 87 (708)
Q Consensus 12 ~~~~~~~~~~~~~h~~~v~~~~~s~~~~-~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~---~~~l~s~ 87 (708)
....++..+++.+|...|..++|||..+ +|..++.+..|+|.|+.+...+. .+..+ ..+.+++|. .+++..|
T Consensus 179 ~~~~fkssq~lp~~g~~IrdlafSp~~~GLl~~asl~nkiki~dlet~~~vs-sy~a~---~~~wSC~wDlde~h~IYaG 254 (463)
T KOG1645|consen 179 ESHDFKSSQILPGEGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLETSCVVS-SYIAY---NQIWSCCWDLDERHVIYAG 254 (463)
T ss_pred ccCCcchhhcccccchhhhhhccCccccceeeeeccCceEEEEecccceeee-heecc---CCceeeeeccCCcceeEEe
Confidence 3445666778999999999999999887 78888999999999999987765 55555 589999999 7889999
Q ss_pred cCCCcEEEEECCCCe-EeEEEee--cCCceEEE------EEecCCCEEEEEeCCCcEEEEEccCCcEEEEEec-cccccc
Q psy12614 88 GLQGFVNEYDMRRLN-IKSSTAV--TSGTCWCL------SVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLL-DRQQGR 157 (708)
Q Consensus 88 ~~d~~i~vwd~~~~~-~~~~~~~--~~~~v~~~------~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~-~~~~~~ 157 (708)
...|.|.++|+...+ ++..+.+ ...+|..+ ...+.|.+|+....+ +..|++....-.....+ ....+.
T Consensus 255 l~nG~VlvyD~R~~~~~~~e~~a~~t~~pv~~i~~~~~n~~f~~gglLv~~lt~--l~f~ei~~s~~~~p~vlele~pG~ 332 (463)
T KOG1645|consen 255 LQNGMVLVYDMRQPEGPLMELVANVTINPVHKIAPVQPNKIFTSGGLLVFALTV--LQFYEIVFSAECLPCVLELEPPGI 332 (463)
T ss_pred ccCceEEEEEccCCCchHhhhhhhhccCcceeecccCccccccccceEEeeehh--hhhhhhhccccCCCcccccCCCcc
Confidence 999999999987643 2222211 11233333 334455566655543 56777653221100111 123556
Q ss_pred EEEEEECCCCCEEE-EecCC----eEEE----EEcCCCceEEEEEecccCCCCCceeE---EEEEEccCCE--EEEEcCC
Q psy12614 158 ILCTAWHSSGDYLV-TGCAA----AVRV----WDIHKGHAIHKMSLDKSSKFSKNTAV---WCVAFCADFT--IITGDSG 223 (708)
Q Consensus 158 v~~~~~s~d~~~l~-~~~~d----~i~i----wd~~~~~~~~~~~~~~~~~~~~~~~v---~~~~~~~~~~--l~~~~~d 223 (708)
..++.+.+-.+.++ +.-.+ +++. -|-.+|..+........+. ..... ..+.-.++++ +.+++..
T Consensus 333 cismqy~~~snh~l~tyRs~pn~p~~r~il~~~d~~dG~pVc~~r~~~~Gs--~~~kl~t~~ai~~~~~nn~iv~~gd~t 410 (463)
T KOG1645|consen 333 CISMQYHGVSNHLLLTYRSNPNFPQSRFILGRIDFRDGFPVCGKRRTYFGS--KQTKLSTTQAIRAVEDNNYIVVVGDST 410 (463)
T ss_pred eeeeeecCccceEEEEecCCCCCccceeeeeeeccccCceeeeecccccCC--cccccccccceeccccccEEEEecCCc
Confidence 66777776555444 33221 1111 1222333333222211000 00000 1122234444 4466777
Q ss_pred CcEEEEeCCCCeeEEEeeccccCeEEEEEeC-CC-CEEEEEecCCeEEEEEccC
Q psy12614 224 GFVRFWDGKTGVQWSDVKTHKKDILALTVSE-DE-NYLYCAGVDPTVVCFQRTR 275 (708)
Q Consensus 224 g~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~-~~-~~l~~~~~dg~i~iw~~~~ 275 (708)
+.+.+||..+++.++++.. ..+|..++... ++ .+|+.-+ |..++||..+.
T Consensus 411 n~lil~D~~s~evvQ~l~~-~epv~Dicp~~~n~~syLa~LT-d~~v~Iyk~es 462 (463)
T KOG1645|consen 411 NELILQDPHSFEVVQTLAL-SEPVLDICPNDTNGSSYLALLT-DDRVHIYKNES 462 (463)
T ss_pred ceeEEeccchhheeeeccc-CcceeecceeecCCcchhhhee-cceEEEEecCC
Confidence 8999999999999999874 47777777654 23 4565554 56788886543
|
|
| >KOG4714|consensus | Back alignment and domain information |
|---|
Probab=98.67 E-value=2.4e-07 Score=80.76 Aligned_cols=162 Identities=16% Similarity=0.254 Sum_probs=105.4
Q ss_pred eccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEc-----CCCcE
Q psy12614 21 FYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGG-----LQGFV 93 (708)
Q Consensus 21 ~~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~-----~d~~i 93 (708)
.+..|.+.-.+-+.+--++.++++..||.+.+.+.+.-..+...++.-. ..-.+.++. ++.+.++. .-+..
T Consensus 84 ~~a~~sep~p~~~~s~~~t~V~~~~~dg~~~v~s~~~~~~~~~~i~~~~--~~~as~~~~~~~~~i~s~~~g~~n~~d~~ 161 (319)
T KOG4714|consen 84 VLAKNSEIDPNDACTMTDNRVCIGYADGSLAVFSTDKDLALMSRIPSIH--SGSASRKICRHGNSILSGGCGNWNAQDNF 161 (319)
T ss_pred eeeccCCCCCcccccccCCceEecCCCceEEEEechHHHhhhhhccccc--ccccccceeecccEEecCCcceEeeccce
Confidence 3444554444445555677899999999999999876222211111111 111112222 44444332 23456
Q ss_pred EEEECCCCeEeEEEeecCCceEEEEEecCCC-EEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCC-CCEEE
Q psy12614 94 NEYDMRRLNIKSSTAVTSGTCWCLSVHKKKR-LLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSS-GDYLV 171 (708)
Q Consensus 94 ~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~-~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d-~~~l~ 171 (708)
+.|+++..+.+..-......|.+++-+|..+ .+++|+.||.+-+||.++.... ...+..|+.++..+-|+|. +..|+
T Consensus 162 ~a~~~~p~~t~~~~~~~~~~v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~~~p-~S~l~ahk~~i~eV~FHpk~p~~Lf 240 (319)
T KOG4714|consen 162 YANTLDPIKTLIPSKKALDAVTALCSHPAQQHLVCCGTDDGIVGLWDARNVAMP-VSLLKAHKAEIWEVHFHPKNPEHLF 240 (319)
T ss_pred eeecccccccccccccccccchhhhCCcccccEEEEecCCCeEEEEEcccccch-HHHHHHhhhhhhheeccCCCchhee
Confidence 6777766543333222334599999999655 5677888999999999987543 2567889999999999985 57899
Q ss_pred EecCC-eEEEEEcCC
Q psy12614 172 TGCAA-AVRVWDIHK 185 (708)
Q Consensus 172 ~~~~d-~i~iwd~~~ 185 (708)
+++.| .+..||..+
T Consensus 241 t~sedGslw~wdas~ 255 (319)
T KOG4714|consen 241 TCSEDGSLWHWDAST 255 (319)
T ss_pred EecCCCcEEEEcCCC
Confidence 99999 999999754
|
|
| >PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide | Back alignment and domain information |
|---|
Probab=98.65 E-value=1e-07 Score=59.81 Aligned_cols=39 Identities=15% Similarity=0.205 Sum_probs=37.0
Q ss_pred CeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEE
Q psy12614 101 LNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQ 139 (708)
Q Consensus 101 ~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd 139 (708)
++++.++.+|.+.|++|+|+|++++|++++.|+.|++||
T Consensus 1 g~~~~~~~~h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd 39 (39)
T PF00400_consen 1 GKCVRTFRGHSSSINSIAWSPDGNFLASGSSDGTIRVWD 39 (39)
T ss_dssp EEEEEEEESSSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred CeEEEEEcCCCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence 467889999999999999999999999999999999997
|
WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g .... |
| >KOG1832|consensus | Back alignment and domain information |
|---|
Probab=98.63 E-value=2.9e-08 Score=100.86 Aligned_cols=219 Identities=15% Similarity=0.115 Sum_probs=141.3
Q ss_pred eeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--C
Q psy12614 235 VQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--G 312 (708)
Q Consensus 235 ~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~ 312 (708)
+..+++..|....+|++|+.+.+.|+.|+-.|.|++|+..+ |. .......|...|+.+.-+ |
T Consensus 1092 r~w~~frd~~~~fTc~afs~~~~hL~vG~~~Geik~~nv~s--------G~--------~e~s~ncH~SavT~vePs~dg 1155 (1516)
T KOG1832|consen 1092 RSWRSFRDETALFTCIAFSGGTNHLAVGSHAGEIKIFNVSS--------GS--------MEESVNCHQSAVTLVEPSVDG 1155 (1516)
T ss_pred ccchhhhccccceeeEEeecCCceEEeeeccceEEEEEccC--------cc--------ccccccccccccccccccCCc
Confidence 34556777889999999999999999999999999999999 86 566778899999988877 5
Q ss_pred CEEEEEcCCC--eEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEEEcCCeEEEEEecCCCCCCCCCCCCCCcccCCC
Q psy12614 313 NRLYSGGLDS--YLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPLLS 390 (708)
Q Consensus 313 ~~l~s~~~d~--~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~ 390 (708)
..+++.+.-. -..+|++ ...-
T Consensus 1156 s~~Ltsss~S~PlsaLW~~----------------------------------------~s~~----------------- 1178 (1516)
T KOG1832|consen 1156 STQLTSSSSSSPLSALWDA----------------------------------------SSTG----------------- 1178 (1516)
T ss_pred ceeeeeccccCchHHHhcc----------------------------------------cccc-----------------
Confidence 5555544322 2334444 3211
Q ss_pred CceEEEEEEecCCCceEEEEeCCCCcEEEEEc-CCceEEEEEEecCCcceeEEeecCCcccc-cceeEEEEEecCCCeEE
Q psy12614 391 FPRLIVKMSAVNNATIRCSVVSNDGKYVAYST-ESCVRLHSLDLDGDKPQISRIKNLPAPLF-KSIFTHVLISADSTLLL 468 (708)
Q Consensus 391 ~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~-d~~i~i~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~s~d~~~l~ 468 (708)
..... -..-.++.|+..-+.-+.|. .....+||+++......+ +.+... ...-.+..|||+..++.
T Consensus 1179 ---~~~Hs----f~ed~~vkFsn~~q~r~~gt~~d~a~~YDvqT~~~l~ty-----lt~~~~~~y~~n~a~FsP~D~LIl 1246 (1516)
T KOG1832|consen 1179 ---GPRHS----FDEDKAVKFSNSLQFRALGTEADDALLYDVQTCSPLQTY-----LTDTVTSSYSNNLAHFSPCDTLIL 1246 (1516)
T ss_pred ---Ccccc----ccccceeehhhhHHHHHhcccccceEEEecccCcHHHHh-----cCcchhhhhhccccccCCCcceEe
Confidence 00000 12234566776654444454 456789999984322221 222111 22224578999999887
Q ss_pred EEecCCcEEEecCCCeEEEEEecCCCCCccCcceEEEEECCCCcEEEEEecCCeEEEEECCce--eeecCCCCCCceEEE
Q psy12614 469 AVSLNGPLYIIDLSSLEIKYCVDPYKSNLMSDVISLVQMSECKQYIVCADRKSHVVIWKNGQH--HASLPRYRKPSTAMA 546 (708)
Q Consensus 469 ~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~--~~~~~~~~~~v~~l~ 546 (708)
.||.+|++... +.++.|.... .-..=.|+|.|.-++..+ .|||+.+. ....+.. .-.++.
T Consensus 1247 ---ndGvLWDvR~~--~aIh~FD~ft------~~~~G~FHP~g~eVIINS-----EIwD~RTF~lLh~VP~L--dqc~Vt 1308 (1516)
T KOG1832|consen 1247 ---NDGVLWDVRIP--EAIHRFDQFT------DYGGGGFHPSGNEVIINS-----EIWDMRTFKLLHSVPSL--DQCAVT 1308 (1516)
T ss_pred ---eCceeeeeccH--HHHhhhhhhe------ecccccccCCCceEEeec-----hhhhhHHHHHHhcCccc--cceEEE
Confidence 78889999876 5555555322 112345899999988876 48999843 3333332 236788
Q ss_pred EcCCCCEEEE
Q psy12614 547 IHPTLSTLVT 556 (708)
Q Consensus 547 ~s~d~~~l~~ 556 (708)
|+..|..+..
T Consensus 1309 FNstG~VmYa 1318 (1516)
T KOG1832|consen 1309 FNSTGDVMYA 1318 (1516)
T ss_pred eccCccchhh
Confidence 8888876653
|
|
| >KOG2695|consensus | Back alignment and domain information |
|---|
Probab=98.63 E-value=1.3e-07 Score=85.80 Aligned_cols=164 Identities=13% Similarity=0.186 Sum_probs=121.6
Q ss_pred EEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECCCC----eEeEEEeecCCceE
Q psy12614 42 AVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMRRL----NIKSSTAVTSGTCW 115 (708)
Q Consensus 42 a~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~----~~~~~~~~~~~~v~ 115 (708)
++.+.+..|-+-|+.+|... .|. .. +.|.++.|. ++.++.|..+|.|...|+..+ .-....-.|...|+
T Consensus 228 fs~G~sqqv~L~nvetg~~q--sf~-sk--sDVfAlQf~~s~nLv~~GcRngeI~~iDLR~rnqG~~~~a~rlyh~Ssvt 302 (425)
T KOG2695|consen 228 FSVGLSQQVLLTNVETGHQQ--SFQ-SK--SDVFALQFAGSDNLVFNGCRNGEIFVIDLRCRNQGNGWCAQRLYHDSSVT 302 (425)
T ss_pred ecccccceeEEEEeeccccc--ccc-cc--hhHHHHHhcccCCeeEecccCCcEEEEEeeecccCCCcceEEEEcCcchh
Confidence 33345667999999987653 344 44 789999998 899999999999999999875 22233346889999
Q ss_pred EEEEec-CCCEEEEEeCCCcEEEEEccCCcEE-EEEecccccccEEEE--EECCCCCEEEEecCC-eEEEEEcCCCceEE
Q psy12614 116 CLSVHK-KKRLLAAGTEQGHINLFQISDEGLL-YEKLLDRQQGRILCT--AWHSSGDYLVTGCAA-AVRVWDIHKGHAIH 190 (708)
Q Consensus 116 ~~~~s~-~~~~la~~~~d~~i~iwd~~~~~~~-~~~~~~~~~~~v~~~--~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~ 190 (708)
++..-. ++++|.+.+-+|.|++||.+.-+.. ......+|-..-..+ ...+....+++++.| ..+||.+..|..+.
T Consensus 303 slq~Lq~s~q~LmaS~M~gkikLyD~R~~K~~~~V~qYeGHvN~~a~l~~~v~~eeg~I~s~GdDcytRiWsl~~ghLl~ 382 (425)
T KOG2695|consen 303 SLQILQFSQQKLMASDMTGKIKLYDLRATKCKKSVMQYEGHVNLSAYLPAHVKEEEGSIFSVGDDCYTRIWSLDSGHLLC 382 (425)
T ss_pred hhhhhccccceEeeccCcCceeEeeehhhhcccceeeeecccccccccccccccccceEEEccCeeEEEEEecccCceee
Confidence 998877 7888988899999999999865541 116677775433322 335666788899999 99999999999999
Q ss_pred EEEecccCCCCCceeEEEEEEcc
Q psy12614 191 KMSLDKSSKFSKNTAVWCVAFCA 213 (708)
Q Consensus 191 ~~~~~~~~~~~~~~~v~~~~~~~ 213 (708)
+++...... +..+.+++|..
T Consensus 383 tipf~~s~~---e~d~~sv~~~s 402 (425)
T KOG2695|consen 383 TIPFPYSAS---EVDIPSVAFDS 402 (425)
T ss_pred ccCCCCccc---cccccceehhc
Confidence 988764322 44566677653
|
|
| >cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases | Back alignment and domain information |
|---|
Probab=98.63 E-value=0.00012 Score=76.23 Aligned_cols=301 Identities=13% Similarity=0.185 Sum_probs=173.0
Q ss_pred CCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCC--C--CcE--EEEEEeC-CEEEEEcCCCcEEEEECCCCeEeEEEeec
Q psy12614 38 SSRLAVSRADQSIEIWDISETPHVDRVFIGDPL--S--NSI--ECLTWFN-DRLFSGGLQGFVNEYDMRRLNIKSSTAVT 110 (708)
Q Consensus 38 ~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~--~--~~v--~~l~~~~-~~l~s~~~d~~i~vwd~~~~~~~~~~~~~ 110 (708)
+..+.+++.++.|.-.|..+|+.+- ....... . ..+ ..++..+ +.++.++.++.|.-+|.++|+.+......
T Consensus 61 ~g~vy~~~~~g~l~AlD~~tG~~~W-~~~~~~~~~~~~~~~~~~g~~~~~~~~V~v~~~~g~v~AlD~~TG~~~W~~~~~ 139 (488)
T cd00216 61 DGDMYFTTSHSALFALDAATGKVLW-RYDPKLPADRGCCDVVNRGVAYWDPRKVFFGTFDGRLVALDAETGKQVWKFGNN 139 (488)
T ss_pred CCEEEEeCCCCcEEEEECCCChhhc-eeCCCCCccccccccccCCcEEccCCeEEEecCCCeEEEEECCCCCEeeeecCC
Confidence 4567777788999999999988654 2221110 0 011 1223335 89999999999999999999998877643
Q ss_pred CCc-----eE-EEEEecCCCEEEEEe---------CCCcEEEEEccCCcEEEEEeccccc------------------cc
Q psy12614 111 SGT-----CW-CLSVHKKKRLLAAGT---------EQGHINLFQISDEGLLYEKLLDRQQ------------------GR 157 (708)
Q Consensus 111 ~~~-----v~-~~~~s~~~~~la~~~---------~d~~i~iwd~~~~~~~~~~~~~~~~------------------~~ 157 (708)
... +. +..+. +..+++++ .++.+..+|..+|+........... ..
T Consensus 140 ~~~~~~~~i~ssP~v~--~~~v~vg~~~~~~~~~~~~g~v~alD~~TG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 217 (488)
T cd00216 140 DQVPPGYTMTGAPTIV--KKLVIIGSSGAEFFACGVRGALRAYDVETGKLLWRFYTTEPDPNAFPTWGPDRQMWGPGGGT 217 (488)
T ss_pred CCcCcceEecCCCEEE--CCEEEEeccccccccCCCCcEEEEEECCCCceeeEeeccCCCcCCCCCCCCCcceecCCCCC
Confidence 321 11 12222 24455554 3678999999999988655443111 00
Q ss_pred E-EEEEECCCCCEEEEecCC-------------------eEEEEEcCCCceEEEEEecccCCC---CCce-eEEEEEEcc
Q psy12614 158 I-LCTAWHSSGDYLVTGCAA-------------------AVRVWDIHKGHAIHKMSLDKSSKF---SKNT-AVWCVAFCA 213 (708)
Q Consensus 158 v-~~~~~s~d~~~l~~~~~d-------------------~i~iwd~~~~~~~~~~~~~~~~~~---~~~~-~v~~~~~~~ 213 (708)
+ ...++.+.+..++.++.+ .|.-+|..+|+.+........... .... .+..+. .-
T Consensus 218 vw~~pa~d~~~g~V~vg~~~g~~~~~~~~~~~~~~~~~~~l~Ald~~tG~~~W~~~~~~~~~~~~~~~s~p~~~~~~-~~ 296 (488)
T cd00216 218 SWASPTYDPKTNLVYVGTGNGSPWNWGGRRTPGDNLYTDSIVALDADTGKVKWFYQTTPHDLWDYDGPNQPSLADIK-PK 296 (488)
T ss_pred ccCCeeEeCCCCEEEEECCCCCCCccCCccCCCCCCceeeEEEEcCCCCCEEEEeeCCCCCCcccccCCCCeEEecc-cc
Confidence 1 123444555666666533 589999999999988765321000 0000 111111 01
Q ss_pred CC----EEEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEE------------------ecCCeEEEE
Q psy12614 214 DF----TIITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCA------------------GVDPTVVCF 271 (708)
Q Consensus 214 ~~----~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~------------------~~dg~i~iw 271 (708)
++ .+++++.+|.+...|.++|+.+-..... ...++.+| ..++.+ ..+|.+.-.
T Consensus 297 ~g~~~~~V~~g~~~G~l~ald~~tG~~~W~~~~~---~~~~~~~~--~~vyv~~~~~~~~~~~~~~~~~~~~~~G~l~Al 371 (488)
T cd00216 297 DGKPVPAIVHAPKNGFFYVLDRTTGKLISARPEV---EQPMAYDP--GLVYLGAFHIPLGLPPQKKKRCKKPGKGGLAAL 371 (488)
T ss_pred CCCeeEEEEEECCCceEEEEECCCCcEeeEeEee---ccccccCC--ceEEEccccccccCcccccCCCCCCCceEEEEE
Confidence 33 2678888999999999999987765421 11233444 233332 235778888
Q ss_pred EccCCcccccCCCCCCCCcceEEeEEEeccc----cce--EEEEEeCCEEEEEcCCCeEEEEeCCCCcee-ecCc-cCCC
Q psy12614 272 QRTRKPQVCSTSGPEQGSSVWVRSVNRVIHE----GDV--KSLALHGNRLYSGGLDSYLSLSYYPPKTLV-KYPC-TLAQ 343 (708)
Q Consensus 272 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~----~~v--~~l~~~~~~l~s~~~d~~i~iw~~~~~~~~-~~~~-~~~~ 343 (708)
|..+ |+ ..|........+. ... ..+...++.++.++.||.+..+|..++++. +..- ....
T Consensus 372 D~~t--------G~----~~W~~~~~~~~~~~~~g~~~~~~~~~~~g~~v~~g~~dG~l~ald~~tG~~lW~~~~~~~~~ 439 (488)
T cd00216 372 DPKT--------GK----VVWEKREGTIRDSWNIGFPHWGGSLATAGNLVFAGAADGYFRAFDATTGKELWKFRTPSGIQ 439 (488)
T ss_pred eCCC--------Cc----EeeEeeCCccccccccCCcccCcceEecCCeEEEECCCCeEEEEECCCCceeeEEECCCCce
Confidence 8888 65 4443221100000 111 233445889999999999999999888733 2221 1112
Q ss_pred CceEEEEcCCcEEEEE
Q psy12614 344 STPVSLAKDIQHVLLQ 359 (708)
Q Consensus 344 ~~~~~~s~~~~~l~~~ 359 (708)
...+.+..+|++.+..
T Consensus 440 a~P~~~~~~g~~yv~~ 455 (488)
T cd00216 440 ATPMTYEVNGKQYVGV 455 (488)
T ss_pred EcCEEEEeCCEEEEEE
Confidence 2334445566555543
|
The alignment model contains an 8-bladed beta-propeller. |
| >PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide | Back alignment and domain information |
|---|
Probab=98.63 E-value=1.2e-07 Score=59.55 Aligned_cols=37 Identities=30% Similarity=0.565 Sum_probs=34.8
Q ss_pred eeeeccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEe
Q psy12614 18 NIKFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWD 54 (708)
Q Consensus 18 ~~~~~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd 54 (708)
..+.+.+|.+.|++++|+|++++||+|+.|+.|++||
T Consensus 3 ~~~~~~~h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd 39 (39)
T PF00400_consen 3 CVRTFRGHSSSINSIAWSPDGNFLASGSSDGTIRVWD 39 (39)
T ss_dssp EEEEEESSSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred EEEEEcCCCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence 4567899999999999999999999999999999997
|
WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g .... |
| >KOG3621|consensus | Back alignment and domain information |
|---|
Probab=98.62 E-value=1e-05 Score=81.25 Aligned_cols=158 Identities=11% Similarity=0.114 Sum_probs=107.8
Q ss_pred CCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECCCCe
Q psy12614 25 EPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMRRLN 102 (708)
Q Consensus 25 h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~~ 102 (708)
|+..|.--+++..+++++.|+..|.+.+|+-..+........+.. +.+..+..+ ..++|.|+..|.|.++-++.+.
T Consensus 32 ~~~~v~lTc~dst~~~l~~GsS~G~lyl~~R~~~~~~~~~~~~~~--~~~~~~~vs~~e~lvAagt~~g~V~v~ql~~~~ 109 (726)
T KOG3621|consen 32 FPARVKLTCVDATEEYLAMGSSAGSVYLYNRHTGEMRKLKNEGAT--GITCVRSVSSVEYLVAAGTASGRVSVFQLNKEL 109 (726)
T ss_pred CcceEEEEEeecCCceEEEecccceEEEEecCchhhhcccccCcc--ceEEEEEecchhHhhhhhcCCceEEeehhhccC
Confidence 566777777888899999999999999999998887654555544 556666666 6667778888899998877643
Q ss_pred Ee-----EEE-eecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEE--EEEecccccccEEEEEECCCCCEEEEec
Q psy12614 103 IK-----SST-AVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLL--YEKLLDRQQGRILCTAWHSSGDYLVTGC 174 (708)
Q Consensus 103 ~~-----~~~-~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~--~~~~~~~~~~~v~~~~~s~d~~~l~~~~ 174 (708)
+. ... +.|...|+|++|++|+..+.+|...|.|..-.+...... ..+.+....+.|..+.+. ++ +|+.++
T Consensus 110 p~~~~~~t~~d~~~~~rVTal~Ws~~~~k~ysGD~~Gkv~~~~L~s~~~~~~~~q~il~~ds~IVQlD~~-q~-~LLVSt 187 (726)
T KOG3621|consen 110 PRDLDYVTPCDKSHKCRVTALEWSKNGMKLYSGDSQGKVVLTELDSRQAFLSKSQEILSEDSEIVQLDYL-QS-YLLVST 187 (726)
T ss_pred CCcceeeccccccCCceEEEEEecccccEEeecCCCceEEEEEechhhhhccccceeeccCcceEEeecc-cc-eehHhh
Confidence 21 111 247889999999999999999999999988887762110 012233345667777765 33 333333
Q ss_pred CCeEEEEEcCCC
Q psy12614 175 AAAVRVWDIHKG 186 (708)
Q Consensus 175 ~d~i~iwd~~~~ 186 (708)
--.-.+.+.+.+
T Consensus 188 l~r~~Lc~tE~e 199 (726)
T KOG3621|consen 188 LTRCILCQTEAE 199 (726)
T ss_pred hhhhheeecchh
Confidence 333334444433
|
|
| >KOG0882|consensus | Back alignment and domain information |
|---|
Probab=98.61 E-value=8.4e-07 Score=83.62 Aligned_cols=245 Identities=15% Similarity=0.091 Sum_probs=162.7
Q ss_pred CCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCC--CCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcC-CCcEEEEECC
Q psy12614 25 EPKVINCIACEPKSSRLAVSRADQSIEIWDISE--TPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGL-QGFVNEYDMR 99 (708)
Q Consensus 25 h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~--~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~-d~~i~vwd~~ 99 (708)
|.+.|+.+.-+ ..+++.+++.||.++.|--.. +....+.+..|- +.|.+++.+ +..+.|.+. |..++++|++
T Consensus 8 hrd~i~hv~~t-ka~fiiqASlDGh~KFWkKs~isGvEfVKhFraHL--~~I~sl~~S~dg~L~~Sv~d~Dhs~KvfDvE 84 (558)
T KOG0882|consen 8 HRDVITHVFPT-KAKFIIQASLDGHKKFWKKSRISGVEFVKHFRAHL--GVILSLAVSYDGWLFRSVEDPDHSVKVFDVE 84 (558)
T ss_pred ccceeeeEeee-hhheEEeeecchhhhhcCCCCccceeehhhhHHHH--HHHHhhhccccceeEeeccCcccceeEEEee
Confidence 56667766554 346899999999999998765 333333566777 888888888 666677676 9999999998
Q ss_pred CCeEeEEEe--ecCCceEEEEEecCC--CEEEEE-eCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEec
Q psy12614 100 RLNIKSSTA--VTSGTCWCLSVHKKK--RLLAAG-TEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGC 174 (708)
Q Consensus 100 ~~~~~~~~~--~~~~~v~~~~~s~~~--~~la~~-~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~ 174 (708)
+-....-++ .-.+.+. +..++.. ..+|+. -.++.+.++|-....+.....-.-|..+|..+.+++-+..+++..
T Consensus 85 n~DminmiKL~~lPg~a~-wv~skGd~~s~IAVs~~~sg~i~VvD~~~d~~q~~~fkklH~sPV~~i~y~qa~Ds~vSiD 163 (558)
T KOG0882|consen 85 NFDMINMIKLVDLPGFAE-WVTSKGDKISLIAVSLFKSGKIFVVDGFGDFCQDGYFKKLHFSPVKKIRYNQAGDSAVSID 163 (558)
T ss_pred ccchhhhcccccCCCceE-EecCCCCeeeeEEeecccCCCcEEECCcCCcCccceecccccCceEEEEeeccccceeecc
Confidence 855443222 1112221 1122211 134443 357889999977655432244455889999999999999999988
Q ss_pred CC-eEEEEEcCC------CceEEEEEecc---cCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCeeEEEeec-
Q psy12614 175 AA-AVRVWDIHK------GHAIHKMSLDK---SSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDVKT- 242 (708)
Q Consensus 175 ~d-~i~iwd~~~------~~~~~~~~~~~---~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~~~- 242 (708)
.. .|.-|.... .+....++... ... .......++.|+|+|. +.+-+.|..|++++..+|+.++.+..
T Consensus 164 ~~gmVEyWs~e~~~qfPr~~l~~~~K~eTdLy~f~-K~Kt~pts~Efsp~g~qistl~~DrkVR~F~~KtGklvqeiDE~ 242 (558)
T KOG0882|consen 164 ISGMVEYWSAEGPFQFPRTNLNFELKHETDLYGFP-KAKTEPTSFEFSPDGAQISTLNPDRKVRGFVFKTGKLVQEIDEV 242 (558)
T ss_pred ccceeEeecCCCcccCccccccccccccchhhccc-ccccCccceEEccccCcccccCcccEEEEEEeccchhhhhhhcc
Confidence 88 999999862 11111111110 000 2356678999999994 88888999999999999877655411
Q ss_pred -------------------------------cc-cCeEEEEEeCCCCEEEEEecCCeEEEEEccC
Q psy12614 243 -------------------------------HK-KDILALTVSEDENYLYCAGVDPTVVCFQRTR 275 (708)
Q Consensus 243 -------------------------------~~-~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~ 275 (708)
|. ..-+.+.|...+++|+.++.= -|++.++.+
T Consensus 243 ~t~~~~q~ks~y~l~~VelgRRmaverelek~~~~~~~~~~fdes~~flly~t~~-gikvin~~t 306 (558)
T KOG0882|consen 243 LTDAQYQPKSPYGLMHVELGRRMAVERELEKHGSTVGTNAVFDESGNFLLYGTIL-GIKVINLDT 306 (558)
T ss_pred chhhhhccccccccceeehhhhhhHHhhHhhhcCcccceeEEcCCCCEEEeecce-eEEEEEeec
Confidence 11 122456777888888877754 367777777
|
|
| >PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=98.59 E-value=4.7e-05 Score=75.91 Aligned_cols=292 Identities=16% Similarity=0.093 Sum_probs=155.8
Q ss_pred CCCCCEEEEecC---------C-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEEEEcCCCcEEEEeCCC
Q psy12614 164 HSSGDYLVTGCA---------A-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKT 233 (708)
Q Consensus 164 s~d~~~l~~~~~---------d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~wd~~~ 233 (708)
|||+++++.... . .+.++|+++++....... ...+....|+|+|+.++--.++.|.+++..+
T Consensus 1 S~d~~~~l~~~~~~~~~r~s~~~~y~i~d~~~~~~~~l~~~--------~~~~~~~~~sP~g~~~~~v~~~nly~~~~~~ 72 (353)
T PF00930_consen 1 SPDGKFVLFATNYTKQWRHSFKGDYYIYDIETGEITPLTPP--------PPKLQDAKWSPDGKYIAFVRDNNLYLRDLAT 72 (353)
T ss_dssp -TTSSEEEEEEEEEEESSSEEEEEEEEEETTTTEEEESS-E--------ETTBSEEEE-SSSTEEEEEETTEEEEESSTT
T ss_pred CCCCCeEEEEECcEEeeeeccceeEEEEecCCCceEECcCC--------ccccccceeecCCCeeEEEecCceEEEECCC
Confidence 688888776322 2 588999998665433221 3457788999999755555678999999887
Q ss_pred CeeEEEee-c-------c---------ccCeEEEEEeCCCCEEEEEecC-CeEEEEEccCCcccccCCCCCCCCcceEEe
Q psy12614 234 GVQWSDVK-T-------H---------KKDILALTVSEDENYLYCAGVD-PTVVCFQRTRKPQVCSTSGPEQGSSVWVRS 295 (708)
Q Consensus 234 ~~~~~~~~-~-------~---------~~~i~~~~~s~~~~~l~~~~~d-g~i~iw~~~~~~~~~~~~g~~~~~~~~~~~ 295 (708)
++..+... + - -+.-..+-||||+++|+....| ..+..+.+.. ..... .
T Consensus 73 ~~~~~lT~dg~~~i~nG~~dwvyeEEv~~~~~~~~WSpd~~~la~~~~d~~~v~~~~~~~-----~~~~~----~----- 138 (353)
T PF00930_consen 73 GQETQLTTDGEPGIYNGVPDWVYEEEVFDRRSAVWWSPDSKYLAFLRFDEREVPEYPLPD-----YSPPD----S----- 138 (353)
T ss_dssp SEEEESES--TTTEEESB--HHHHHHTSSSSBSEEE-TTSSEEEEEEEE-TTS-EEEEEE-----ESSST----E-----
T ss_pred CCeEEeccccceeEEcCccceeccccccccccceEECCCCCEEEEEEECCcCCceEEeec-----cCCcc----c-----
Confidence 75543221 1 0 1123568899999999876554 3444443322 00010 0
Q ss_pred EEEeccccceEEEEEe--CCEEEEEcCCCeEEEEeCCCCceeecCcc------CCCCceEEEEcCCc-EEEEE--c-CC-
Q psy12614 296 VNRVIHEGDVKSLALH--GNRLYSGGLDSYLSLSYYPPKTLVKYPCT------LAQSTPVSLAKDIQ-HVLLQ--Y-TS- 362 (708)
Q Consensus 296 ~~~~~~~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~~~~~~~~~~------~~~~~~~~~s~~~~-~l~~~--~-~~- 362 (708)
....+..+.+. |... ..-.+.++++.++....+..+ ......+.|+++++ +++.. . .+
T Consensus 139 -----~yp~~~~~~YPk~G~~n----p~v~l~v~~~~~~~~~~~~~~~~~~~~~~yl~~v~W~~d~~~l~~~~~nR~q~~ 209 (353)
T PF00930_consen 139 -----QYPEVESIRYPKAGDPN----PRVSLFVVDLASGKTTELDPPNSLNPQDYYLTRVGWSPDGKRLWVQWLNRDQNR 209 (353)
T ss_dssp -----SS-EEEEEE--BTTS-------EEEEEEEESSSTCCCEE---HHHHTSSEEEEEEEEEETTEEEEEEEEETTSTE
T ss_pred -----cCCcccccccCCCCCcC----CceEEEEEECCCCcEEEeeeccccCCCccCcccceecCCCcEEEEEEcccCCCE
Confidence 00112222222 2211 112456677777664333211 12335688999999 44443 1 22
Q ss_pred -eEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCce---EEEEeC-CCCcEEEE-Ec-CCceEEEEEEecC
Q psy12614 363 -HLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATI---RCSVVS-NDGKYVAY-ST-ESCVRLHSLDLDG 435 (708)
Q Consensus 363 -~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i---~~~~~s-~~g~~l~~-~~-d~~i~i~~~~~~~ 435 (708)
.+.++|..++.. .+.. .......| ....+. +++..++. +. +|.-+||-++...
T Consensus 210 ~~l~~~d~~tg~~-------------------~~~~-~e~~~~Wv~~~~~~~~~~~~~~~~l~~s~~~G~~hly~~~~~~ 269 (353)
T PF00930_consen 210 LDLVLCDASTGET-------------------RVVL-EETSDGWVDVYDPPHFLGPDGNEFLWISERDGYRHLYLYDLDG 269 (353)
T ss_dssp EEEEEEEECTTTC-------------------EEEE-EEESSSSSSSSSEEEE-TTTSSEEEEEEETTSSEEEEEEETTS
T ss_pred EEEEEEECCCCce-------------------eEEE-EecCCcceeeecccccccCCCCEEEEEEEcCCCcEEEEEcccc
Confidence 356666665541 2111 22222332 244444 66665554 44 8888888887644
Q ss_pred CcceeEEeecCCcccccceeE-EEEEecCCCeEEEEecC-C--c--EEEecCCCeEEEEEecCCCCCccCcceEEEEECC
Q psy12614 436 DKPQISRIKNLPAPLFKSIFT-HVLISADSTLLLAVSLN-G--P--LYIIDLSSLEIKYCVDPYKSNLMSDVISLVQMSE 509 (708)
Q Consensus 436 ~~~~~~~~~~~~~~~~~~~i~-~~~~s~d~~~l~~~~~d-g--~--i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~ 509 (708)
+. .+. +... ...|+ -+.++++++.|...+.. + . ||.++......+.++....+. . ..+.|||
T Consensus 270 ~~--~~~---lT~G--~~~V~~i~~~d~~~~~iyf~a~~~~p~~r~lY~v~~~~~~~~~~LT~~~~~----~-~~~~~Sp 337 (353)
T PF00930_consen 270 GK--PRQ---LTSG--DWEVTSILGWDEDNNRIYFTANGDNPGERHLYRVSLDSGGEPKCLTCEDGD----H-YSASFSP 337 (353)
T ss_dssp SE--EEE---SS-S--SS-EEEEEEEECTSSEEEEEESSGGTTSBEEEEEETTETTEEEESSTTSST----T-EEEEE-T
T ss_pred cc--eec---cccC--ceeecccceEcCCCCEEEEEecCCCCCceEEEEEEeCCCCCeEeccCCCCC----c-eEEEECC
Confidence 33 222 3322 12332 27888988877655443 2 2 888876622455666654432 1 6899999
Q ss_pred CCcEEEEEe
Q psy12614 510 CKQYIVCAD 518 (708)
Q Consensus 510 ~~~~l~~~~ 518 (708)
+|++++...
T Consensus 338 dg~y~v~~~ 346 (353)
T PF00930_consen 338 DGKYYVDTY 346 (353)
T ss_dssp TSSEEEEEE
T ss_pred CCCEEEEEE
Confidence 999988654
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: |
| >KOG1920|consensus | Back alignment and domain information |
|---|
Probab=98.55 E-value=5.5e-05 Score=81.03 Aligned_cols=205 Identities=14% Similarity=0.126 Sum_probs=133.9
Q ss_pred CceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEc----CCC
Q psy12614 112 GTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDI----HKG 186 (708)
Q Consensus 112 ~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~----~~~ 186 (708)
..|.++.|..+.+.+..+..+|.|.+-|.++.... ....-.+.|.+++||||++.++..+.+ ++.+-+- -..
T Consensus 69 ~~i~s~~fl~d~~~i~v~~~~G~iilvd~et~~~e---ivg~vd~GI~aaswS~Dee~l~liT~~~tll~mT~~f~~i~E 145 (1265)
T KOG1920|consen 69 DEIVSVQFLADTNSICVITALGDIILVDPETLELE---IVGNVDNGISAASWSPDEELLALITGRQTLLFMTKDFEPIAE 145 (1265)
T ss_pred cceEEEEEecccceEEEEecCCcEEEEccccccee---eeeeccCceEEEeecCCCcEEEEEeCCcEEEEEeccccchhc
Confidence 57999999999999999999999999998888764 333446789999999999999988886 6555332 111
Q ss_pred ceE-------------------EEEEeccc--------CCC------CCceeEEEEEEccCCEEEEE-----cCC-CcEE
Q psy12614 187 HAI-------------------HKMSLDKS--------SKF------SKNTAVWCVAFCADFTIITG-----DSG-GFVR 227 (708)
Q Consensus 187 ~~~-------------------~~~~~~~~--------~~~------~~~~~v~~~~~~~~~~l~~~-----~~d-g~i~ 227 (708)
+.+ ..+..... .+. .....=..+.|--||++++. ..+ ..|+
T Consensus 146 ~~L~~d~~~~sk~v~VGwGrkeTqfrgs~gr~~~~~~~~~ek~~~~~~~~~~~~~IsWRgDg~~fAVs~~~~~~~~Rkir 225 (1265)
T KOG1920|consen 146 KPLDADDERKSKFVNVGWGRKETQFRGSEGRQAARQKIEKEKALEQIEQDDHKTSISWRGDGEYFAVSFVESETGTRKIR 225 (1265)
T ss_pred cccccccccccccceecccccceeeecchhhhcccccccccccccchhhccCCceEEEccCCcEEEEEEEeccCCceeEE
Confidence 111 11110000 000 00111235889999974433 234 7899
Q ss_pred EEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEe---cCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccc
Q psy12614 228 FWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAG---VDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGD 304 (708)
Q Consensus 228 ~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~---~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 304 (708)
+||-+ |..-..-....+.-.+++|-|.|..+++.. .|+.|.+|..+. +..|+ ....++.....
T Consensus 226 V~drE-g~Lns~se~~~~l~~~LsWkPsgs~iA~iq~~~sd~~IvffErNG-----L~hg~--------f~l~~p~de~~ 291 (1265)
T KOG1920|consen 226 VYDRE-GALNSTSEPVEGLQHSLSWKPSGSLIAAIQCKTSDSDIVFFERNG-----LRHGE--------FVLPFPLDEKE 291 (1265)
T ss_pred Eeccc-chhhcccCcccccccceeecCCCCeEeeeeecCCCCcEEEEecCC-----ccccc--------cccCCcccccc
Confidence 99976 544333222333446899999999988753 456799998876 22232 12223333445
Q ss_pred eEEEEEe--CCEEEE---EcCCCeEEEEeCCCCc
Q psy12614 305 VKSLALH--GNRLYS---GGLDSYLSLSYYPPKT 333 (708)
Q Consensus 305 v~~l~~~--~~~l~s---~~~d~~i~iw~~~~~~ 333 (708)
+..++|+ +..|++ ......|++|-+.+..
T Consensus 292 ve~L~Wns~sdiLAv~~~~~e~~~v~lwt~~Nyh 325 (1265)
T KOG1920|consen 292 VEELAWNSNSDILAVVTSNLENSLVQLWTTGNYH 325 (1265)
T ss_pred hheeeecCCCCceeeeecccccceEEEEEecCeE
Confidence 8999999 777777 4555569999998866
|
|
| >PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=98.55 E-value=0.00051 Score=64.82 Aligned_cols=259 Identities=12% Similarity=0.111 Sum_probs=157.4
Q ss_pred CcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeC----------CCcEEEEEccCCcEEEEEecccc-c----
Q psy12614 91 GFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTE----------QGHINLFQISDEGLLYEKLLDRQ-Q---- 155 (708)
Q Consensus 91 ~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~----------d~~i~iwd~~~~~~~~~~~~~~~-~---- 155 (708)
+.+.+.|.++++.+..+.. +-.-.+..+||++.+++++. .-.|.+||..+-.......+... .
T Consensus 17 ~rv~viD~d~~k~lGmi~~--g~~~~~~~spdgk~~y~a~T~~sR~~rG~RtDvv~~~D~~TL~~~~EI~iP~k~R~~~~ 94 (342)
T PF06433_consen 17 SRVYVIDADSGKLLGMIDT--GFLGNVALSPDGKTIYVAETFYSRGTRGERTDVVEIWDTQTLSPTGEIEIPPKPRAQVV 94 (342)
T ss_dssp EEEEEEETTTTEEEEEEEE--ESSEEEEE-TTSSEEEEEEEEEEETTEEEEEEEEEEEETTTTEEEEEEEETTS-B--BS
T ss_pred ceEEEEECCCCcEEEEeec--ccCCceeECCCCCEEEEEEEEEeccccccceeEEEEEecCcCcccceEecCCcchheec
Confidence 4799999999998877764 33344778999998886532 34599999999877655555542 1
Q ss_pred ccEEEEEECCCCCEEEEec--CC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEEEEcCCCcEEEEeCC
Q psy12614 156 GRILCTAWHSSGDYLVTGC--AA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGK 232 (708)
Q Consensus 156 ~~v~~~~~s~d~~~l~~~~--~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~wd~~ 232 (708)
.....++++.|+++++... .- .|.|.|+..++.+..+..+ ++ ..+--+++..+.+.+.||.+.-..+.
T Consensus 95 ~~~~~~~ls~dgk~~~V~N~TPa~SVtVVDl~~~kvv~ei~~P--------GC-~~iyP~~~~~F~~lC~DGsl~~v~Ld 165 (342)
T PF06433_consen 95 PYKNMFALSADGKFLYVQNFTPATSVTVVDLAAKKVVGEIDTP--------GC-WLIYPSGNRGFSMLCGDGSLLTVTLD 165 (342)
T ss_dssp --GGGEEE-TTSSEEEEEEESSSEEEEEEETTTTEEEEEEEGT--------SE-EEEEEEETTEEEEEETTSCEEEEEET
T ss_pred ccccceEEccCCcEEEEEccCCCCeEEEEECCCCceeeeecCC--------CE-EEEEecCCCceEEEecCCceEEEEEC
Confidence 1223468899999988765 44 8999999999999988764 22 22222233458888999999988887
Q ss_pred -CCeeEEEe----eccccCe-EEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEec------
Q psy12614 233 -TGVQWSDV----KTHKKDI-LALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVI------ 300 (708)
Q Consensus 233 -~~~~~~~~----~~~~~~i-~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~------ 300 (708)
.|+...+. .....++ ..-++...+..++-.+.+|.|+--++.. .. .++.....+..
T Consensus 166 ~~Gk~~~~~t~~F~~~~dp~f~~~~~~~~~~~~~F~Sy~G~v~~~dlsg--------~~----~~~~~~~~~~t~~e~~~ 233 (342)
T PF06433_consen 166 ADGKEAQKSTKVFDPDDDPLFEHPAYSRDGGRLYFVSYEGNVYSADLSG--------DS----AKFGKPWSLLTDAEKAD 233 (342)
T ss_dssp STSSEEEEEEEESSTTTS-B-S--EEETTTTEEEEEBTTSEEEEEEETT--------SS----EEEEEEEESS-HHHHHT
T ss_pred CCCCEeEeeccccCCCCcccccccceECCCCeEEEEecCCEEEEEeccC--------Cc----ccccCcccccCcccccc
Confidence 45554322 1112222 2344555666666688899999999876 22 22221111110
Q ss_pred --cccceEEEEEe--CCEEEEEc--------CCC--eEEEEeCCCCc-eeecCccCCCCceEEEEcCCcEEEE--E-cCC
Q psy12614 301 --HEGDVKSLALH--GNRLYSGG--------LDS--YLSLSYYPPKT-LVKYPCTLAQSTPVSLAKDIQHVLL--Q-YTS 362 (708)
Q Consensus 301 --~~~~v~~l~~~--~~~l~s~~--------~d~--~i~iw~~~~~~-~~~~~~~~~~~~~~~~s~~~~~l~~--~-~~~ 362 (708)
-.+.-.-++++ .+.|+..- .|+ .|.++|+.+++ +.++. ......+++++.+.+-++. . .++
T Consensus 234 ~WrPGG~Q~~A~~~~~~rlyvLMh~g~~gsHKdpgteVWv~D~~t~krv~Ri~-l~~~~~Si~Vsqd~~P~L~~~~~~~~ 312 (342)
T PF06433_consen 234 GWRPGGWQLIAYHAASGRLYVLMHQGGEGSHKDPGTEVWVYDLKTHKRVARIP-LEHPIDSIAVSQDDKPLLYALSAGDG 312 (342)
T ss_dssp TEEE-SSS-EEEETTTTEEEEEEEE--TT-TTS-EEEEEEEETTTTEEEEEEE-EEEEESEEEEESSSS-EEEEEETTTT
T ss_pred CcCCcceeeeeeccccCeEEEEecCCCCCCccCCceEEEEEECCCCeEEEEEe-CCCccceEEEccCCCcEEEEEcCCCC
Confidence 01122334555 34444321 122 46677777766 45554 2234568999998874443 3 568
Q ss_pred eEEEEEecCCC
Q psy12614 363 HLELWSLGSAQ 373 (708)
Q Consensus 363 ~i~i~~~~~~~ 373 (708)
.+.+||..+++
T Consensus 313 ~l~v~D~~tGk 323 (342)
T PF06433_consen 313 TLDVYDAATGK 323 (342)
T ss_dssp EEEEEETTT--
T ss_pred eEEEEeCcCCc
Confidence 89999999877
|
4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). |
| >PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=98.53 E-value=0.00023 Score=71.02 Aligned_cols=299 Identities=12% Similarity=0.056 Sum_probs=147.5
Q ss_pred CCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccc
Q psy12614 223 GGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHE 302 (708)
Q Consensus 223 dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 302 (708)
.+.+.+||+++++....... ...+....|||+|+.++... ++.|.+++..+ +. ...+
T Consensus 22 ~~~y~i~d~~~~~~~~l~~~-~~~~~~~~~sP~g~~~~~v~-~~nly~~~~~~--------~~---------~~~l---- 78 (353)
T PF00930_consen 22 KGDYYIYDIETGEITPLTPP-PPKLQDAKWSPDGKYIAFVR-DNNLYLRDLAT--------GQ---------ETQL---- 78 (353)
T ss_dssp EEEEEEEETTTTEEEESS-E-ETTBSEEEE-SSSTEEEEEE-TTEEEEESSTT--------SE---------EEES----
T ss_pred ceeEEEEecCCCceEECcCC-ccccccceeecCCCeeEEEe-cCceEEEECCC--------CC---------eEEe----
Confidence 46799999998776554443 67888999999999998876 67899998877 32 1111
Q ss_pred cceEEEEEeC-CEEEEEcCCCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEEE--cCCeEEEEEecCCCCCCCCC
Q psy12614 303 GDVKSLALHG-NRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQ--YTSHLELWSLGSAQSTDLSS 379 (708)
Q Consensus 303 ~~v~~l~~~~-~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~--~~~~i~i~~~~~~~~~~~~~ 379 (708)
...| ..+..|-.| |- ... +-+.....+-+|||++.|+.. .+..+..+.+.....
T Consensus 79 ------T~dg~~~i~nG~~d-----wv-----yeE--Ev~~~~~~~~WSpd~~~la~~~~d~~~v~~~~~~~~~~----- 135 (353)
T PF00930_consen 79 ------TTDGEPGIYNGVPD-----WV-----YEE--EVFDRRSAVWWSPDSKYLAFLRFDEREVPEYPLPDYSP----- 135 (353)
T ss_dssp ------ES--TTTEEESB-------HH-----HHH--HTSSSSBSEEE-TTSSEEEEEEEE-TTS-EEEEEEESS-----
T ss_pred ------ccccceeEEcCccc-----ee-----ccc--cccccccceEECCCCCEEEEEEECCcCCceEEeeccCC-----
Confidence 1111 111111111 00 000 013445789999999999873 444444443332110
Q ss_pred CCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEEEcCCc--eEEEEEEecCCcc-eeEEeecCCc-ccc-cce
Q psy12614 380 HSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYSTESC--VRLHSLDLDGDKP-QISRIKNLPA-PLF-KSI 454 (708)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~d~~--i~i~~~~~~~~~~-~~~~~~~~~~-~~~-~~~ 454 (708)
.. . ....+..+.+-.-|.- ... +.++++.. +.. .+. .+. ... ...
T Consensus 136 -----------~~-~-------~yp~~~~~~YPk~G~~-----np~v~l~v~~~~~--~~~~~~~----~~~~~~~~~~y 185 (353)
T PF00930_consen 136 -----------PD-S-------QYPEVESIRYPKAGDP-----NPRVSLFVVDLAS--GKTTELD----PPNSLNPQDYY 185 (353)
T ss_dssp -----------ST-E-------SS-EEEEEE--BTTS--------EEEEEEEESSS--TCCCEE-------HHHHTSSEE
T ss_pred -----------cc-c-------cCCcccccccCCCCCc-----CCceEEEEEECCC--CcEEEee----eccccCCCccC
Confidence 00 0 0001222222111110 123 34455543 332 222 221 111 446
Q ss_pred eEEEEEecCCCeEEEEe--cCCc-----EEEecCCCeEEEEEecCCCCCccCcceEEEEEC-CCCc-EEEEEecCCe--E
Q psy12614 455 FTHVLISADSTLLLAVS--LNGP-----LYIIDLSSLEIKYCVDPYKSNLMSDVISLVQMS-ECKQ-YIVCADRKSH--V 523 (708)
Q Consensus 455 i~~~~~s~d~~~l~~~~--~dg~-----i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s-~~~~-~l~~~~~d~~--i 523 (708)
+..+.|++|++.|++.- .+.. +.+..++..+.+..-..... -..-....|. +++. +|.....+|. |
T Consensus 186 l~~v~W~~d~~~l~~~~~nR~q~~~~l~~~d~~tg~~~~~~~e~~~~W---v~~~~~~~~~~~~~~~~l~~s~~~G~~hl 262 (353)
T PF00930_consen 186 LTRVGWSPDGKRLWVQWLNRDQNRLDLVLCDASTGETRVVLEETSDGW---VDVYDPPHFLGPDGNEFLWISERDGYRHL 262 (353)
T ss_dssp EEEEEEEETTEEEEEEEEETTSTEEEEEEEEECTTTCEEEEEEESSSS---SSSSSEEEE-TTTSSEEEEEEETTSSEEE
T ss_pred cccceecCCCcEEEEEEcccCCCEEEEEEEECCCCceeEEEEecCCcc---eeeecccccccCCCCEEEEEEEcCCCcEE
Confidence 67799999999444433 3333 44555555554443332222 2223355554 5544 5555556775 4
Q ss_pred EEEECCce-eeecCCCCCCceE-EEEcCCCCEEEE-EecC--C--cEEEEEcC-CCCCCchhhhhhccCchhhhcCCCCe
Q psy12614 524 VIWKNGQH-HASLPRYRKPSTA-MAIHPTLSTLVT-VYSD--H--RIVEFDLN-RKAFTTFSRKLETNHPNEWLSRQLPV 595 (708)
Q Consensus 524 ~iw~~~~~-~~~~~~~~~~v~~-l~~s~d~~~l~~-~~~d--g--~i~vwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~i 595 (708)
.+++.... ...+....-.|+. +.++++++.|.. +..+ + .|+.-++. .++.. .+......|
T Consensus 263 y~~~~~~~~~~~lT~G~~~V~~i~~~d~~~~~iyf~a~~~~p~~r~lY~v~~~~~~~~~--------~LT~~~~~~---- 330 (353)
T PF00930_consen 263 YLYDLDGGKPRQLTSGDWEVTSILGWDEDNNRIYFTANGDNPGERHLYRVSLDSGGEPK--------CLTCEDGDH---- 330 (353)
T ss_dssp EEEETTSSEEEESS-SSS-EEEEEEEECTSSEEEEEESSGGTTSBEEEEEETTETTEEE--------ESSTTSSTT----
T ss_pred EEEcccccceeccccCceeecccceEcCCCCEEEEEecCCCCCceEEEEEEeCCCCCeE--------eccCCCCCc----
Confidence 45555533 3466666667755 678888777654 4332 2 45555666 44433 122222222
Q ss_pred eEEEeCCCCCceEEEEc
Q psy12614 596 LGIEFDPQDSSLIYLMD 612 (708)
Q Consensus 596 ~~l~~s~~~~~l~~~~~ 612 (708)
..+.|||++++++....
T Consensus 331 ~~~~~Spdg~y~v~~~s 347 (353)
T PF00930_consen 331 YSASFSPDGKYYVDTYS 347 (353)
T ss_dssp EEEEE-TTSSEEEEEEE
T ss_pred eEEEECCCCCEEEEEEc
Confidence 68999999999875543
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: |
| >PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment | Back alignment and domain information |
|---|
Probab=98.52 E-value=3.1e-05 Score=77.93 Aligned_cols=219 Identities=14% Similarity=0.173 Sum_probs=120.3
Q ss_pred CcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe-CCEEEEEcCCCcEEEEECCCCeEeE
Q psy12614 27 KVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF-NDRLFSGGLQGFVNEYDMRRLNIKS 105 (708)
Q Consensus 27 ~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~-~~~l~s~~~d~~i~vwd~~~~~~~~ 105 (708)
-....++++|+|+++++++ +|.-.|+.....+... . +.-...+|. .+.+|+-...++|.++.--+.+...
T Consensus 33 ~~p~~ls~npngr~v~V~g-~geY~iyt~~~~r~k~---~-----G~g~~~vw~~~n~yAv~~~~~~I~I~kn~~~~~~k 103 (443)
T PF04053_consen 33 IYPQSLSHNPNGRFVLVCG-DGEYEIYTALAWRNKA---F-----GSGLSFVWSSRNRYAVLESSSTIKIYKNFKNEVVK 103 (443)
T ss_dssp S--SEEEE-TTSSEEEEEE-TTEEEEEETTTTEEEE---E-----EE-SEEEE-TSSEEEEE-TTS-EEEEETTEE-TT-
T ss_pred cCCeeEEECCCCCEEEEEc-CCEEEEEEccCCcccc---c-----CceeEEEEecCccEEEEECCCeEEEEEcCccccce
Confidence 3467899999999999955 7899999854433221 1 334567888 7888888889999996322222222
Q ss_pred EEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCCeEEEEEcCC
Q psy12614 106 STAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAAAVRVWDIHK 185 (708)
Q Consensus 106 ~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~i~iwd~~~ 185 (708)
.+... ..+..|-. |.+|+..+.+ .|.+||+++++.+ ..+.- .+|..+.|+++|++++..+.+.+.+++...
T Consensus 104 ~i~~~-~~~~~If~---G~LL~~~~~~-~i~~yDw~~~~~i--~~i~v--~~vk~V~Ws~~g~~val~t~~~i~il~~~~ 174 (443)
T PF04053_consen 104 SIKLP-FSVEKIFG---GNLLGVKSSD-FICFYDWETGKLI--RRIDV--SAVKYVIWSDDGELVALVTKDSIYILKYNL 174 (443)
T ss_dssp ----S-S-EEEEE----SSSEEEEETT-EEEEE-TTT--EE--EEESS---E-EEEEE-TTSSEEEEE-S-SEEEEEE-H
T ss_pred EEcCC-cccceEEc---CcEEEEECCC-CEEEEEhhHccee--eEEec--CCCcEEEEECCCCEEEEEeCCeEEEEEecc
Confidence 33321 12333333 8888776554 7999999999987 44442 248999999999999999988777766443
Q ss_pred C-----------ceEEEEEecccCCCCCceeEEEEEEccCCEEEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeC
Q psy12614 186 G-----------HAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSE 254 (708)
Q Consensus 186 ~-----------~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~ 254 (708)
. .....+..- ...|.+.+|..| -++-.+.. .++.+ ..|+. .++..-..++.-+.+.+
T Consensus 175 ~~~~~~~~~g~e~~f~~~~E~-------~~~IkSg~W~~d-~fiYtT~~-~lkYl--~~Ge~-~~i~~ld~~~yllgy~~ 242 (443)
T PF04053_consen 175 EAVAAIPEEGVEDAFELIHEI-------SERIKSGCWVED-CFIYTTSN-HLKYL--VNGET-GIIAHLDKPLYLLGYLP 242 (443)
T ss_dssp HHHHHBTTTB-GGGEEEEEEE--------S--SEEEEETT-EEEEE-TT-EEEEE--ETTEE-EEEEE-SS--EEEEEET
T ss_pred hhcccccccCchhceEEEEEe-------cceeEEEEEEcC-EEEEEcCC-eEEEE--EcCCc-ceEEEcCCceEEEEEEc
Confidence 2 022222111 455777777766 44444444 66663 23332 23333346677788888
Q ss_pred CCCEEEEEecCCeEEEEEccC
Q psy12614 255 DENYLYCAGVDPTVVCFQRTR 275 (708)
Q Consensus 255 ~~~~l~~~~~dg~i~iw~~~~ 275 (708)
+.+.++....|+.+..+.+..
T Consensus 243 ~~~~ly~~Dr~~~v~~~~ld~ 263 (443)
T PF04053_consen 243 KENRLYLIDRDGNVISYELDL 263 (443)
T ss_dssp TTTEEEEE-TT--EEEEE--H
T ss_pred cCCEEEEEECCCCEEEEEECH
Confidence 888999999999998887754
|
This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B. |
| >KOG1275|consensus | Back alignment and domain information |
|---|
Probab=98.51 E-value=2.5e-06 Score=87.79 Aligned_cols=181 Identities=18% Similarity=0.213 Sum_probs=141.1
Q ss_pred CCEEEEEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEE
Q psy12614 81 NDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILC 160 (708)
Q Consensus 81 ~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~ 160 (708)
+..++.|+....+...|+.+.+..+......+.|.-|+. +++.+.+|...|+|.+-|..+.+.+ ..+..|.+.|..
T Consensus 147 ~~~~i~Gg~Q~~li~~Dl~~~~e~r~~~v~a~~v~imR~--Nnr~lf~G~t~G~V~LrD~~s~~~i--ht~~aHs~siSD 222 (1118)
T KOG1275|consen 147 PSTLIMGGLQEKLIHIDLNTEKETRTTNVSASGVTIMRY--NNRNLFCGDTRGTVFLRDPNSFETI--HTFDAHSGSISD 222 (1118)
T ss_pred CcceeecchhhheeeeecccceeeeeeeccCCceEEEEe--cCcEEEeecccceEEeecCCcCcee--eeeeccccceee
Confidence 457888888888999999999888877766555655554 5688999999999999999999888 899999999987
Q ss_pred EEECCCCCEEEEecCC----------eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCC--EEEEEcCCCcEEE
Q psy12614 161 TAWHSSGDYLVTGCAA----------AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADF--TIITGDSGGFVRF 228 (708)
Q Consensus 161 ~~~s~d~~~l~~~~~d----------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~l~~~~~dg~i~~ 228 (708)
+.. .|+.|++++.. -|+|||++..+.+..+.... ...-+.|.|.- ++++++..|+..+
T Consensus 223 fDv--~GNlLitCG~S~R~~~l~~D~FvkVYDLRmmral~PI~~~~--------~P~flrf~Psl~t~~~V~S~sGq~q~ 292 (1118)
T KOG1275|consen 223 FDV--QGNLLITCGYSMRRYNLAMDPFVKVYDLRMMRALSPIQFPY--------GPQFLRFHPSLTTRLAVTSQSGQFQF 292 (1118)
T ss_pred eec--cCCeEEEeecccccccccccchhhhhhhhhhhccCCccccc--------CchhhhhcccccceEEEEecccceee
Confidence 665 58899998753 48999999888777665542 12345677754 5889999999999
Q ss_pred Ee---CCCC-eeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccC
Q psy12614 229 WD---GKTG-VQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTR 275 (708)
Q Consensus 229 wd---~~~~-~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~ 275 (708)
-| +.+. ..+..+......+..+.++++++.++.|..+|.|.+|.-..
T Consensus 293 vd~~~lsNP~~~~~~v~p~~s~i~~fDiSsn~~alafgd~~g~v~~wa~~~ 343 (1118)
T KOG1275|consen 293 VDTATLSNPPAGVKMVNPNGSGISAFDISSNGDALAFGDHEGHVNLWADRP 343 (1118)
T ss_pred ccccccCCCccceeEEccCCCcceeEEecCCCceEEEecccCcEeeecCCC
Confidence 99 3332 12233333456699999999999999999999999998443
|
|
| >PRK02888 nitrous-oxide reductase; Validated | Back alignment and domain information |
|---|
Probab=98.50 E-value=1.4e-05 Score=81.30 Aligned_cols=193 Identities=14% Similarity=0.082 Sum_probs=118.4
Q ss_pred EeCCCCcEEEE-Ec-CCceEEEEEEecCCcceeEEeecCCcccccceeEEEEEecCCCeEEEEecC---Cc-EEEecCCC
Q psy12614 410 VVSNDGKYVAY-ST-ESCVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVLISADSTLLLAVSLN---GP-LYIIDLSS 483 (708)
Q Consensus 410 ~~s~~g~~l~~-~~-d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~~~~~d---g~-i~~~~~~~ 483 (708)
-++|||+.+.. +. .+.+.+.|.++. ... ..+. +.+. ... ++++|||+++++.+.+ |. +-.++..+
T Consensus 199 PlpnDGk~l~~~~ey~~~vSvID~etm--eV~-~qV~-Vdgn--pd~---v~~spdGk~afvTsyNsE~G~tl~em~a~e 269 (635)
T PRK02888 199 PLPNDGKDLDDPKKYRSLFTAVDAETM--EVA-WQVM-VDGN--LDN---VDTDYDGKYAFSTCYNSEEGVTLAEMMAAE 269 (635)
T ss_pred ccCCCCCEeecccceeEEEEEEECccc--eEE-EEEE-eCCC--ccc---ceECCCCCEEEEeccCcccCcceeeecccc
Confidence 46678876654 33 666777776642 211 1111 2221 223 7999999999988743 33 55555543
Q ss_pred eEEEEEecCCCCCccCcceEEEEECCCCcEEEEEecCCeEEEEECCc----e--eeecCCCCCCceEEEEcCCCCEEEEE
Q psy12614 484 LEIKYCVDPYKSNLMSDVISLVQMSECKQYIVCADRKSHVVIWKNGQ----H--HASLPRYRKPSTAMAIHPTLSTLVTV 557 (708)
Q Consensus 484 ~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~----~--~~~~~~~~~~v~~l~~s~d~~~l~~~ 557 (708)
...+..+... .+ .++.++|++...+ ++.|.+.|..+ . ....-.-...+..++++|||++++++
T Consensus 270 ~d~~vvfni~-------~i--ea~vkdGK~~~V~--gn~V~VID~~t~~~~~~~v~~yIPVGKsPHGV~vSPDGkylyVa 338 (635)
T PRK02888 270 RDWVVVFNIA-------RI--EEAVKAGKFKTIG--GSKVPVVDGRKAANAGSALTRYVPVPKNPHGVNTSPDGKYFIAN 338 (635)
T ss_pred CceEEEEchH-------HH--HHhhhCCCEEEEC--CCEEEEEECCccccCCcceEEEEECCCCccceEECCCCCEEEEe
Confidence 3333333211 11 1345688877763 67899999986 2 22223345678899999999998877
Q ss_pred ec-CCcEEEEEcCCCCCCchhhhh--hccCchhhhcCCCCeeEEEeCCCCCceEEEEcCeeEEEEecCCC
Q psy12614 558 YS-DHRIVEFDLNRKAFTTFSRKL--ETNHPNEWLSRQLPVLGIEFDPQDSSLIYLMDDSALCVINKNKS 624 (708)
Q Consensus 558 ~~-dg~i~vwd~~~~~~~~~~~~~--~~~~~~~~~~~~~~i~~l~~s~~~~~l~~~~~d~~i~~wd~~~~ 624 (708)
+. +.++.|.|+++.+.. +...+ ...+.++..- .......+|+++|....+..-|..|..||+...
T Consensus 339 nklS~tVSVIDv~k~k~~-~~~~~~~~~~vvaevev-GlGPLHTaFDg~G~aytslf~dsqv~kwn~~~a 406 (635)
T PRK02888 339 GKLSPTVTVIDVRKLDDL-FDGKIKPRDAVVAEPEL-GLGPLHTAFDGRGNAYTTLFLDSQIVKWNIEAA 406 (635)
T ss_pred CCCCCcEEEEEChhhhhh-hhccCCccceEEEeecc-CCCcceEEECCCCCEEEeEeecceeEEEehHHH
Confidence 55 889999999875521 00000 0001112111 234556899999988888889999999999863
|
|
| >KOG2695|consensus | Back alignment and domain information |
|---|
Probab=98.49 E-value=2.9e-07 Score=83.63 Aligned_cols=153 Identities=14% Similarity=0.194 Sum_probs=115.2
Q ss_pred EEe----CCEEEEEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcE--EEEEec
Q psy12614 78 TWF----NDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGL--LYEKLL 151 (708)
Q Consensus 78 ~~~----~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~--~~~~~~ 151 (708)
+|+ +-. ++.+.+..|-+-|+++|.... +. ..+.|.++.|...++++..|+.+|.|..+|++.+.. ......
T Consensus 218 awSlni~gyh-fs~G~sqqv~L~nvetg~~qs-f~-sksDVfAlQf~~s~nLv~~GcRngeI~~iDLR~rnqG~~~~a~r 294 (425)
T KOG2695|consen 218 AWSLNIMGYH-FSVGLSQQVLLTNVETGHQQS-FQ-SKSDVFALQFAGSDNLVFNGCRNGEIFVIDLRCRNQGNGWCAQR 294 (425)
T ss_pred hhhhccceee-ecccccceeEEEEeecccccc-cc-cchhHHHHHhcccCCeeEecccCCcEEEEEeeecccCCCcceEE
Confidence 676 334 778888899999999976543 22 567899999999999999999999999999986511 000233
Q ss_pred ccccccEEEEEECC-CCCEEEEecCC-eEEEEEcCCCce---EEEEEecccCCCCCceeEEEEEEcc------CCEEEEE
Q psy12614 152 DRQQGRILCTAWHS-SGDYLVTGCAA-AVRVWDIHKGHA---IHKMSLDKSSKFSKNTAVWCVAFCA------DFTIITG 220 (708)
Q Consensus 152 ~~~~~~v~~~~~s~-d~~~l~~~~~d-~i~iwd~~~~~~---~~~~~~~~~~~~~~~~~v~~~~~~~------~~~l~~~ 220 (708)
..|...|+++..-. ++++|++.+.+ .|++||++--++ +..+. +-|+..++.| +|-++++
T Consensus 295 lyh~Ssvtslq~Lq~s~q~LmaS~M~gkikLyD~R~~K~~~~V~qYe----------GHvN~~a~l~~~v~~eeg~I~s~ 364 (425)
T KOG2695|consen 295 LYHDSSVTSLQILQFSQQKLMASDMTGKIKLYDLRATKCKKSVMQYE----------GHVNLSAYLPAHVKEEEGSIFSV 364 (425)
T ss_pred EEcCcchhhhhhhccccceEeeccCcCceeEeeehhhhcccceeeee----------cccccccccccccccccceEEEc
Confidence 34788899988776 78889888888 999999986665 54443 2233333333 3358899
Q ss_pred cCCCcEEEEeCCCCeeEEEeecc
Q psy12614 221 DSGGFVRFWDGKTGVQWSDVKTH 243 (708)
Q Consensus 221 ~~dg~i~~wd~~~~~~~~~~~~~ 243 (708)
+.|...+||.++.|..+.+++..
T Consensus 365 GdDcytRiWsl~~ghLl~tipf~ 387 (425)
T KOG2695|consen 365 GDDCYTRIWSLDSGHLLCTIPFP 387 (425)
T ss_pred cCeeEEEEEecccCceeeccCCC
Confidence 99999999999999999888643
|
|
| >KOG1897|consensus | Back alignment and domain information |
|---|
Probab=98.47 E-value=0.0033 Score=66.51 Aligned_cols=528 Identities=11% Similarity=0.033 Sum_probs=261.9
Q ss_pred CcEEEEEEcCC----CCEEEEEe---CCCcEEEEeCCCC--CeEEEEEecCCCCCcEEEEE--Ee---CCEEEEEcCCCc
Q psy12614 27 KVINCIACEPK----SSRLAVSR---ADQSIEIWDISET--PHVDRVFIGDPLSNSIECLT--WF---NDRLFSGGLQGF 92 (708)
Q Consensus 27 ~~v~~~~~s~~----~~~la~~~---~dg~v~iwd~~~~--~~~~~~~~~h~~~~~v~~l~--~~---~~~l~s~~~d~~ 92 (708)
++|..++.-.. +..+++++ .||+++|..-.-+ +.....++| . ..+..+. +. .++|+.+-.+-+
T Consensus 354 gPI~Dm~Vvd~d~q~q~qivtCsGa~kdgSLRiiRngi~I~e~A~i~l~G-i--kg~w~lk~~v~~~~d~ylvlsf~~eT 430 (1096)
T KOG1897|consen 354 GPIVDMCVVDLDRQGQGQIVTCSGAFKDGSLRIIRNGIGIDELASIDLPG-I--KGMWSLKSMVDENYDNYLVLSFISET 430 (1096)
T ss_pred cceeeEEEEeccccCCceEEEEeCCCCCCcEEEEecccccceeeEeecCC-c--cceeEeeccccccCCcEEEEEeccce
Confidence 46666665432 24566653 5889998865543 222234555 2 4566666 33 556665544333
Q ss_pred EEEEECCCCeEeEEEeecCCceEEEEEec-CCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEE
Q psy12614 93 VNEYDMRRLNIKSSTAVTSGTCWCLSVHK-KKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLV 171 (708)
Q Consensus 93 i~vwd~~~~~~~~~~~~~~~~v~~~~~s~-~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~ 171 (708)
++..+...-......+-......++.|. .++.|+=.. ...|++++-. +.. ..+.. .+.++....+-+...++
T Consensus 431 -rvl~i~~e~ee~~~~gf~~~~~Tif~S~i~g~~lvQvT-s~~iRl~ss~-~~~---~~W~~-p~~~ti~~~~~n~sqVv 503 (1096)
T KOG1897|consen 431 -RVLNISEEVEETEDPGFSTDEQTIFCSTINGNQLVQVT-SNSIRLVSSA-GLR---SEWRP-PGKITIGVVSANASQVV 503 (1096)
T ss_pred -EEEEEccceEEeccccccccCceEEEEccCCceEEEEe-cccEEEEcch-hhh---hcccC-CCceEEEEEeecceEEE
Confidence 3333332211111112222233333332 233332222 2347777655 221 22222 33344444444555777
Q ss_pred EecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCC------E-EEEEcCCCcEEEEe-CCCCeeEEEe--
Q psy12614 172 TGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADF------T-IITGDSGGFVRFWD-GKTGVQWSDV-- 240 (708)
Q Consensus 172 ~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~------~-l~~~~~dg~i~~wd-~~~~~~~~~~-- 240 (708)
.++.+ .+...++..+. ++..... .-+..|.|+.++|-| + +++|..+..+.+.- +.+...+...
T Consensus 504 vA~~~~~l~y~~i~~~~-l~e~~~~-----~~e~evaCLDisp~~d~~~~s~~~aVG~Ws~~~~~l~~~pd~~~~~~~~l 577 (1096)
T KOG1897|consen 504 VAGGGLALFYLEIEDGG-LREVSHK-----EFEYEVACLDISPLGDAPNKSRLLAVGLWSDISMILTFLPDLILITHEQL 577 (1096)
T ss_pred EecCccEEEEEEeeccc-eeeeeeh-----eecceeEEEecccCCCCCCcceEEEEEeecceEEEEEECCCcceeeeecc
Confidence 77776 77777766555 2222111 226789999999742 2 56676665544432 2333222211
Q ss_pred e--ccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe---CCEE
Q psy12614 241 K--THKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH---GNRL 315 (708)
Q Consensus 241 ~--~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~---~~~l 315 (708)
. .-...|.-.++-.|..+|.++..||.+.-|.+.... |+.. ..+...--..++.--.|+ ...+
T Consensus 578 ~~~~iPRSIl~~~~e~d~~yLlvalgdG~l~~fv~d~~t------g~ls------d~Kk~~lGt~P~~Lr~f~sk~~t~v 645 (1096)
T KOG1897|consen 578 SGEIIPRSILLTTFEGDIHYLLVALGDGALLYFVLDINT------GQLS------DRKKVTLGTQPISLRTFSSKSRTAV 645 (1096)
T ss_pred CCCccchheeeEEeeccceEEEEEcCCceEEEEEEEccc------ceEc------cccccccCCCCcEEEEEeeCCceEE
Confidence 1 123455566676778899999999998877665411 2200 001001112223222333 2333
Q ss_pred EEEcCCCeEEEEeCCCCceeecCccCCCCc-eEEEEc--CCcEEEEEcCCeEEEEEecCCCCCCCCCCCCCCcccCCCCc
Q psy12614 316 YSGGLDSYLSLSYYPPKTLVKYPCTLAQST-PVSLAK--DIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFP 392 (708)
Q Consensus 316 ~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~-~~~~s~--~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (708)
+.+ .|.-..+|..+.+....-. ...... ...++. -+..++....+.+.+..+..-+
T Consensus 646 fa~-sdrP~viY~~n~kLv~spl-s~kev~~~c~f~s~a~~d~l~~~~~~~l~i~tid~iq------------------- 704 (1096)
T KOG1897|consen 646 FAL-SDRPTVIYSSNGKLVYSPL-SLKEVNHMCPFNSDAYPDSLASANGGALTIGTIDEIQ------------------- 704 (1096)
T ss_pred EEe-CCCCEEEEecCCcEEEecc-chHHhhhhcccccccCCceEEEecCCceEEEEecchh-------------------
Confidence 333 3333334443333211110 111111 111211 2345666677777777666533
Q ss_pred eEEEEEEecCCCceEEEEeCCCCcEEEEEc------------CC---ceEEEEEEecCCcceeEEeecCCcccccceeEE
Q psy12614 393 RLIVKMSAVNNATIRCSVVSNDGKYVAYST------------ES---CVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTH 457 (708)
Q Consensus 393 ~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~------------d~---~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 457 (708)
++.............+++.+....+++.. .. .++++|-.+ ......+++.......++.+
T Consensus 705 -kl~irtvpl~~~prrI~~q~~sl~~~v~s~r~e~~~~~~~ee~~~s~l~vlD~nT----f~vl~~hef~~~E~~~Si~s 779 (1096)
T KOG1897|consen 705 -KLHIRTVPLGESPRRICYQESSLTFGVLSNRIESSAEYYGEEYEVSFLRVLDQNT----FEVLSSHEFERNETALSIIS 779 (1096)
T ss_pred -hcceeeecCCCChhheEecccceEEEEEecccccchhhcCCcceEEEEEEecCCc----eeEEeeccccccceeeeeee
Confidence 11111112233444555555333333311 11 234444332 11211112222222455666
Q ss_pred EEEecC-CCeEEEEec----------CCc--EEEecC-CCeEEEEEecCCCCCccCcceEEEEECCCCcEEEEEecCCeE
Q psy12614 458 VLISAD-STLLLAVSL----------NGP--LYIIDL-SSLEIKYCVDPYKSNLMSDVISLVQMSECKQYIVCADRKSHV 523 (708)
Q Consensus 458 ~~~s~d-~~~l~~~~~----------dg~--i~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i 523 (708)
+.|..| +.++++|+. .|+ |+.++. +..+.+..... .+.+.++.. -+|++||.- ...|
T Consensus 780 ~~~~~d~~t~~vVGT~~v~Pde~ep~~GRIivfe~~e~~~L~~v~e~~v------~Gav~aL~~-fngkllA~I--n~~v 850 (1096)
T KOG1897|consen 780 CKFTDDPNTYYVVGTGLVYPDENEPVNGRIIVFEFEELNSLELVAETVV------KGAVYALVE-FNGKLLAGI--NQSV 850 (1096)
T ss_pred eeecCCCceEEEEEEEeeccCCCCcccceEEEEEEecCCceeeeeeeee------ccceeehhh-hCCeEEEec--CcEE
Confidence 778888 788887762 244 666666 33333333221 334444432 177777765 5689
Q ss_pred EEEECCc--eeeecCCCCCCceEEEEcCCCCEEEEEecCCcEEEEEcCCCC--CCchhhhhhccCchhhhcCCCCeeEEE
Q psy12614 524 VIWKNGQ--HHASLPRYRKPSTAMAIHPTLSTLVTVYSDHRIVEFDLNRKA--FTTFSRKLETNHPNEWLSRQLPVLGIE 599 (708)
Q Consensus 524 ~iw~~~~--~~~~~~~~~~~v~~l~~s~d~~~l~~~~~dg~i~vwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~l~ 599 (708)
++|+..+ ....-..+..++..+...-.|..+++|+.=+.+.+......+ ..+.. +. -+..-+.++.
T Consensus 851 rLye~t~~~eLr~e~~~~~~~~aL~l~v~gdeI~VgDlm~Sitll~y~~~eg~f~evA--------rD--~~p~Wmtave 920 (1096)
T KOG1897|consen 851 RLYEWTTERELRIECNISNPIIALDLQVKGDEIAVGDLMRSITLLQYKGDEGNFEEVA--------RD--YNPNWMTAVE 920 (1096)
T ss_pred EEEEccccceehhhhcccCCeEEEEEEecCcEEEEeeccceEEEEEEeccCCceEEee--------hh--hCccceeeEE
Confidence 9999883 344566788899999999999999999888877776555433 44211 11 2444566667
Q ss_pred eCCCCCceEEEEcCeeEEEEecCCCCCcc
Q psy12614 600 FDPQDSSLIYLMDDSALCVINKNKSLAHA 628 (708)
Q Consensus 600 ~s~~~~~l~~~~~d~~i~~wd~~~~~~~~ 628 (708)
+-.+..+ +-+..+|.+.+-..+...+..
T Consensus 921 il~~d~y-lgae~~gNlf~v~~d~~~~td 948 (1096)
T KOG1897|consen 921 ILDDDTY-LGAENSGNLFTVRKDSDATTD 948 (1096)
T ss_pred EecCceE-EeecccccEEEEEecCCCCch
Confidence 6665554 555678888888777555433
|
|
| >cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases | Back alignment and domain information |
|---|
Probab=98.45 E-value=0.00022 Score=74.44 Aligned_cols=225 Identities=16% Similarity=0.126 Sum_probs=139.5
Q ss_pred CEEEEEeCCCcEEEEeCCCCCeEEEEEecCC-C--CCcEE-EEEEeCCEEEEEc---------CCCcEEEEECCCCeEeE
Q psy12614 39 SRLAVSRADQSIEIWDISETPHVDRVFIGDP-L--SNSIE-CLTWFNDRLFSGG---------LQGFVNEYDMRRLNIKS 105 (708)
Q Consensus 39 ~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~-~--~~~v~-~l~~~~~~l~s~~---------~d~~i~vwd~~~~~~~~ 105 (708)
..+++++.+|.|.-+|..+|+.+- ...... . ...+. +..+.+..++.++ .++.+...|.++|+.+.
T Consensus 111 ~~V~v~~~~g~v~AlD~~TG~~~W-~~~~~~~~~~~~~i~ssP~v~~~~v~vg~~~~~~~~~~~~g~v~alD~~TG~~~W 189 (488)
T cd00216 111 RKVFFGTFDGRLVALDAETGKQVW-KFGNNDQVPPGYTMTGAPTIVKKLVIIGSSGAEFFACGVRGALRAYDVETGKLLW 189 (488)
T ss_pred CeEEEecCCCeEEEEECCCCCEee-eecCCCCcCcceEecCCCEEECCEEEEeccccccccCCCCcEEEEEECCCCceee
Confidence 677788889999999999998764 222211 0 00011 1223356666654 36889999999999888
Q ss_pred EEeecCC--------------------ceE-EEEEecCCCEEEEEeCCC------------------cEEEEEccCCcEE
Q psy12614 106 STAVTSG--------------------TCW-CLSVHKKKRLLAAGTEQG------------------HINLFQISDEGLL 146 (708)
Q Consensus 106 ~~~~~~~--------------------~v~-~~~~s~~~~~la~~~~d~------------------~i~iwd~~~~~~~ 146 (708)
.+..... .++ ..++.+.+..+++++.++ .|.-+|..+|+..
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~vw~~pa~d~~~g~V~vg~~~g~~~~~~~~~~~~~~~~~~~l~Ald~~tG~~~ 269 (488)
T cd00216 190 RFYTTEPDPNAFPTWGPDRQMWGPGGGTSWASPTYDPKTNLVYVGTGNGSPWNWGGRRTPGDNLYTDSIVALDADTGKVK 269 (488)
T ss_pred EeeccCCCcCCCCCCCCCcceecCCCCCccCCeeEeCCCCEEEEECCCCCCCccCCccCCCCCCceeeEEEEcCCCCCEE
Confidence 7754211 111 345566667788877665 7999999999998
Q ss_pred EEEecccccccE----EEEEEC----CCCC---EEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccC
Q psy12614 147 YEKLLDRQQGRI----LCTAWH----SSGD---YLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCAD 214 (708)
Q Consensus 147 ~~~~~~~~~~~v----~~~~~s----~d~~---~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 214 (708)
.......+.... ....+. -++. .++.++.+ .+...|.++|+.+.+.... ...++..|
T Consensus 270 W~~~~~~~~~~~~~~~s~p~~~~~~~~~g~~~~~V~~g~~~G~l~ald~~tG~~~W~~~~~----------~~~~~~~~- 338 (488)
T cd00216 270 WFYQTTPHDLWDYDGPNQPSLADIKPKDGKPVPAIVHAPKNGFFYVLDRTTGKLISARPEV----------EQPMAYDP- 338 (488)
T ss_pred EEeeCCCCCCcccccCCCCeEEeccccCCCeeEEEEEECCCceEEEEECCCCcEeeEeEee----------ccccccCC-
Confidence 765544332110 001111 2343 56777777 9999999999998876542 11123333
Q ss_pred CEEEEE------------------cCCCcEEEEeCCCCeeEEEeeccc--------cCeEEEEEeCCCCEEEEEecCCeE
Q psy12614 215 FTIITG------------------DSGGFVRFWDGKTGVQWSDVKTHK--------KDILALTVSEDENYLYCAGVDPTV 268 (708)
Q Consensus 215 ~~l~~~------------------~~dg~i~~wd~~~~~~~~~~~~~~--------~~i~~~~~s~~~~~l~~~~~dg~i 268 (708)
+.++.+ ..+|.+.-.|..+|+.+-...... .....-.....+..|++++.||.+
T Consensus 339 ~~vyv~~~~~~~~~~~~~~~~~~~~~~G~l~AlD~~tG~~~W~~~~~~~~~~~~~g~~~~~~~~~~~g~~v~~g~~dG~l 418 (488)
T cd00216 339 GLVYLGAFHIPLGLPPQKKKRCKKPGKGGLAALDPKTGKVVWEKREGTIRDSWNIGFPHWGGSLATAGNLVFAGAADGYF 418 (488)
T ss_pred ceEEEccccccccCcccccCCCCCCCceEEEEEeCCCCcEeeEeeCCccccccccCCcccCcceEecCCeEEEECCCCeE
Confidence 332221 246788889999998776654320 111111111245688999999999
Q ss_pred EEEEccC
Q psy12614 269 VCFQRTR 275 (708)
Q Consensus 269 ~iw~~~~ 275 (708)
+.+|..+
T Consensus 419 ~ald~~t 425 (488)
T cd00216 419 RAFDATT 425 (488)
T ss_pred EEEECCC
Confidence 9999999
|
The alignment model contains an 8-bladed beta-propeller. |
| >KOG1275|consensus | Back alignment and domain information |
|---|
Probab=98.44 E-value=6.1e-06 Score=85.05 Aligned_cols=180 Identities=16% Similarity=0.188 Sum_probs=131.0
Q ss_pred CCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEeCCEEEEEcCCCcEEEEECCCCeEeEEEeecCCceEEE
Q psy12614 38 SSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWFNDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCL 117 (708)
Q Consensus 38 ~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~ 117 (708)
+..++.|+-...+..+|+.+.+..+ ...-.. ..|.-|..+++.+.+|...|+|.+-|..+.+.++++..|.+.|..+
T Consensus 147 ~~~~i~Gg~Q~~li~~Dl~~~~e~r-~~~v~a--~~v~imR~Nnr~lf~G~t~G~V~LrD~~s~~~iht~~aHs~siSDf 223 (1118)
T KOG1275|consen 147 PSTLIMGGLQEKLIHIDLNTEKETR-TTNVSA--SGVTIMRYNNRNLFCGDTRGTVFLRDPNSFETIHTFDAHSGSISDF 223 (1118)
T ss_pred Ccceeecchhhheeeeecccceeee-eeeccC--CceEEEEecCcEEEeecccceEEeecCCcCceeeeeeccccceeee
Confidence 4566777666678888988877654 443333 4688888889999999999999999999999999999999999765
Q ss_pred EEecCCCEEEEEeC---------CCcEEEEEccCCcEEEEEecccccccEEEEEECCCC-CEEEEecCC-eEEEEE---c
Q psy12614 118 SVHKKKRLLAAGTE---------QGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSG-DYLVTGCAA-AVRVWD---I 183 (708)
Q Consensus 118 ~~s~~~~~la~~~~---------d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~-~~l~~~~~d-~i~iwd---~ 183 (708)
+-.|+.|++++. |.-|++||++.-+.+ ..+.-+.++ .-+.|.|.- ..+++++.. ...+-| +
T Consensus 224 --Dv~GNlLitCG~S~R~~~l~~D~FvkVYDLRmmral--~PI~~~~~P-~flrf~Psl~t~~~V~S~sGq~q~vd~~~l 298 (1118)
T KOG1275|consen 224 --DVQGNLLITCGYSMRRYNLAMDPFVKVYDLRMMRAL--SPIQFPYGP-QFLRFHPSLTTRLAVTSQSGQFQFVDTATL 298 (1118)
T ss_pred --eccCCeEEEeecccccccccccchhhhhhhhhhhcc--CCcccccCc-hhhhhcccccceEEEEecccceeecccccc
Confidence 457889998875 455899999987665 333333333 456677753 455555555 888888 4
Q ss_pred CCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeC
Q psy12614 184 HKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDG 231 (708)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~ 231 (708)
.+...-..+... ....+..+.+++++. ++.|..+|.|.+|.-
T Consensus 299 sNP~~~~~~v~p------~~s~i~~fDiSsn~~alafgd~~g~v~~wa~ 341 (1118)
T KOG1275|consen 299 SNPPAGVKMVNP------NGSGISAFDISSNGDALAFGDHEGHVNLWAD 341 (1118)
T ss_pred CCCccceeEEcc------CCCcceeEEecCCCceEEEecccCcEeeecC
Confidence 333222222211 145589999999997 899999999999973
|
|
| >PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals | Back alignment and domain information |
|---|
Probab=98.44 E-value=0.00024 Score=70.58 Aligned_cols=236 Identities=14% Similarity=0.172 Sum_probs=138.6
Q ss_pred cEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeE------------------------------------------EEEE
Q psy12614 28 VINCIACEPKSSRLAVSRADQSIEIWDISETPHV------------------------------------------DRVF 65 (708)
Q Consensus 28 ~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~------------------------------------------~~~~ 65 (708)
.|+++.|+++..-||+|..+|.|.||.+...+.- ...+
T Consensus 3 ~v~~vs~a~~t~Elav~~~~GeVv~~k~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~di~~r~~~~~~~gf~P~~l~ 82 (395)
T PF08596_consen 3 SVTHVSFAPETLELAVGLESGEVVLFKFGKNQNYGNREQPPDLDYNFRRFSLNNSPGKLTDISDRAPPSLKEGFLPLTLL 82 (395)
T ss_dssp -EEEEEEETTTTEEEEEETTS-EEEEEEEE------------------S--GGGSS-SEEE-GGG--TT-SEEEEEEEEE
T ss_pred eEEEEEecCCCceEEEEccCCcEEEEEcccCCCCCccCCCcccCcccccccccCCCcceEEehhhCCcccccccCchhhe
Confidence 5899999999999999999999999976432110 1122
Q ss_pred ecCCCCCcEEEEEEe-CCEEEEEcCCCcEEEEECCCCeEeEEEe--e------cCCceEEEEEec-----CC---CEEEE
Q psy12614 66 IGDPLSNSIECLTWF-NDRLFSGGLQGFVNEYDMRRLNIKSSTA--V------TSGTCWCLSVHK-----KK---RLLAA 128 (708)
Q Consensus 66 ~~h~~~~~v~~l~~~-~~~l~s~~~d~~i~vwd~~~~~~~~~~~--~------~~~~v~~~~~s~-----~~---~~la~ 128 (708)
.... ++|++++.| -.+++.|..+|.+.|.|+.....+..-. . ....|+++.|+- |+ -.|++
T Consensus 83 ~~~~--g~vtal~~S~iGFvaigy~~G~l~viD~RGPavI~~~~i~~~~~~~~~~~~vt~ieF~vm~~~~D~ySSi~L~v 160 (395)
T PF08596_consen 83 DAKQ--GPVTALKNSDIGFVAIGYESGSLVVIDLRGPAVIYNENIRESFLSKSSSSYVTSIEFSVMTLGGDGYSSICLLV 160 (395)
T ss_dssp ---S---SEEEEEE-BTSEEEEEETTSEEEEEETTTTEEEEEEEGGG--T-SS----EEEEEEEEEE-TTSSSEEEEEEE
T ss_pred eccC--CcEeEEecCCCcEEEEEecCCcEEEEECCCCeEEeeccccccccccccccCeeEEEEEEEecCCCcccceEEEE
Confidence 2233 899999999 8899999999999999998877666532 2 234688888873 33 46889
Q ss_pred EeCCCcEEEEEcc-C--CcEE--EEEecccccccEEEEE-ECCC---------------------CCEEEEecCCeEEEE
Q psy12614 129 GTEQGHINLFQIS-D--EGLL--YEKLLDRQQGRILCTA-WHSS---------------------GDYLVTGCAAAVRVW 181 (708)
Q Consensus 129 ~~~d~~i~iwd~~-~--~~~~--~~~~~~~~~~~v~~~~-~s~d---------------------~~~l~~~~~d~i~iw 181 (708)
|+..|.+.+|.+. . +... +......+.++|..+. |+.+ ..++++++...++++
T Consensus 161 GTn~G~v~~fkIlp~~~g~f~v~~~~~~~~~~~~i~~I~~i~~~~G~~a~At~~~~~~l~~g~~i~g~vVvvSe~~irv~ 240 (395)
T PF08596_consen 161 GTNSGNVLTFKILPSSNGRFSVQFAGATTNHDSPILSIIPINADTGESALATISAMQGLSKGISIPGYVVVVSESDIRVF 240 (395)
T ss_dssp EETTSEEEEEEEEE-GGG-EEEEEEEEE--SS----EEEEEETTT--B-B-BHHHHHGGGGT----EEEEEE-SSEEEEE
T ss_pred EeCCCCEEEEEEecCCCCceEEEEeeccccCCCceEEEEEEECCCCCcccCchhHhhccccCCCcCcEEEEEcccceEEE
Confidence 9999999999875 1 2221 1122224566666665 4222 125666666699999
Q ss_pred EcCCCceEEEEEecccCCCCCceeEEEEEEcc-----CCE-EEEEcCCCcEEEEeCCCCeeEEEeeccc----cCeEEEE
Q psy12614 182 DIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCA-----DFT-IITGDSGGFVRFWDGKTGVQWSDVKTHK----KDILALT 251 (708)
Q Consensus 182 d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-----~~~-l~~~~~dg~i~~wd~~~~~~~~~~~~~~----~~i~~~~ 251 (708)
...+.+...+.... ......+.+.+ .+. |++-..+|.+++|.+..-+.+..+.... ..+...+
T Consensus 241 ~~~~~k~~~K~~~~-------~~~~~~~~vv~~~~~~~~~~Lv~l~~~G~i~i~SLP~Lkei~~~~l~~~~d~~~~~~ss 313 (395)
T PF08596_consen 241 KPPKSKGAHKSFDD-------PFLCSSASVVPTISRNGGYCLVCLFNNGSIRIYSLPSLKEIKSVSLPPPLDSRRLSSSS 313 (395)
T ss_dssp -TT---EEEEE-SS--------EEEEEEEEEEEE-EEEEEEEEEEETTSEEEEEETTT--EEEEEE-SS---HHHHTT-E
T ss_pred eCCCCcccceeecc-------ccccceEEEEeecccCCceEEEEEECCCcEEEEECCCchHhhcccCCCccccccccccE
Confidence 99888877665521 23333444532 333 8888999999999999988887765432 2344566
Q ss_pred EeCCCCEEEEEecCCeEEEEEc
Q psy12614 252 VSEDENYLYCAGVDPTVVCFQR 273 (708)
Q Consensus 252 ~s~~~~~l~~~~~dg~i~iw~~ 273 (708)
++++|..++-.+. ..+.++.+
T Consensus 314 is~~Gdi~~~~gp-sE~~l~sv 334 (395)
T PF08596_consen 314 ISRNGDIFYWTGP-SEIQLFSV 334 (395)
T ss_dssp E-TTS-EEEE-SS-SEEEEEEE
T ss_pred ECCCCCEEEEeCc-ccEEEEEE
Confidence 7888876655543 34444444
|
The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A. |
| >PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators [] | Back alignment and domain information |
|---|
Probab=98.42 E-value=0.00019 Score=65.96 Aligned_cols=201 Identities=10% Similarity=0.092 Sum_probs=119.0
Q ss_pred EecccccccEEEEEECCCCCEEEEecC-C-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEEEEc-CCCc
Q psy12614 149 KLLDRQQGRILCTAWHSSGDYLVTGCA-A-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGD-SGGF 225 (708)
Q Consensus 149 ~~~~~~~~~v~~~~~s~d~~~l~~~~~-d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~-~dg~ 225 (708)
+.+.+-...+..++|.|+...|++... . .|...+. +|+.++++.... ....-.+++..+++++... .++.
T Consensus 15 ~~l~g~~~e~SGLTy~pd~~tLfaV~d~~~~i~els~-~G~vlr~i~l~g------~~D~EgI~y~g~~~~vl~~Er~~~ 87 (248)
T PF06977_consen 15 KPLPGILDELSGLTYNPDTGTLFAVQDEPGEIYELSL-DGKVLRRIPLDG------FGDYEGITYLGNGRYVLSEERDQR 87 (248)
T ss_dssp EE-TT--S-EEEEEEETTTTEEEEEETTTTEEEEEET-T--EEEEEE-SS-------SSEEEEEE-STTEEEEEETTTTE
T ss_pred eECCCccCCccccEEcCCCCeEEEEECCCCEEEEEcC-CCCEEEEEeCCC------CCCceeEEEECCCEEEEEEcCCCc
Confidence 456666677999999998776665554 4 8888886 589999988753 4668889999889866555 4888
Q ss_pred EEEEeCCCCe------eEEEee-----ccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEE
Q psy12614 226 VRFWDGKTGV------QWSDVK-----THKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVR 294 (708)
Q Consensus 226 i~~wd~~~~~------~~~~~~-----~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~ 294 (708)
+.++++.... ....+. .++..+-.++|+|.++.|+.+-...-..+|.+.... .+. ...
T Consensus 88 L~~~~~~~~~~~~~~~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~kE~~P~~l~~~~~~~-----~~~------~~~ 156 (248)
T PF06977_consen 88 LYIFTIDDDTTSLDRADVQKISLGFPNKGNKGFEGLAYDPKTNRLFVAKERKPKRLYEVNGFP-----GGF------DLF 156 (248)
T ss_dssp EEEEEE----TT--EEEEEEEE---S---SS--EEEEEETTTTEEEEEEESSSEEEEEEESTT------SS--------E
T ss_pred EEEEEEeccccccchhhceEEecccccCCCcceEEEEEcCCCCEEEEEeCCCChhhEEEcccc-----Ccc------cee
Confidence 9998874321 112221 245678999999999899888877777777765400 000 001
Q ss_pred eEE------EeccccceEEEEEe---CCEEEEEcCCCeEEEEeCCCCceeecC---------ccCCCCceEEEEcCCcEE
Q psy12614 295 SVN------RVIHEGDVKSLALH---GNRLYSGGLDSYLSLSYYPPKTLVKYP---------CTLAQSTPVSLAKDIQHV 356 (708)
Q Consensus 295 ~~~------~~~~~~~v~~l~~~---~~~l~s~~~d~~i~iw~~~~~~~~~~~---------~~~~~~~~~~~s~~~~~l 356 (708)
... .......+.+++++ +.+++....+..+..+|.....+..+. ...+++..+++.++|++.
T Consensus 157 ~~~~~~~~~~~~~~~d~S~l~~~p~t~~lliLS~es~~l~~~d~~G~~~~~~~L~~g~~gl~~~~~QpEGIa~d~~G~LY 236 (248)
T PF06977_consen 157 VSDDQDLDDDKLFVRDLSGLSYDPRTGHLLILSDESRLLLELDRQGRVVSSLSLDRGFHGLSKDIPQPEGIAFDPDGNLY 236 (248)
T ss_dssp EEE-HHHH-HT--SS---EEEEETTTTEEEEEETTTTEEEEE-TT--EEEEEE-STTGGG-SS---SEEEEEE-TT--EE
T ss_pred eccccccccccceeccccceEEcCCCCeEEEEECCCCeEEEECCCCCEEEEEEeCCcccCcccccCCccEEEECCCCCEE
Confidence 111 11233457888888 678888888899999997665422222 124567889999999999
Q ss_pred EEEcCCeEEEE
Q psy12614 357 LLQYTSHLELW 367 (708)
Q Consensus 357 ~~~~~~~i~i~ 367 (708)
+++..+.+++|
T Consensus 237 IvsEpNlfy~f 247 (248)
T PF06977_consen 237 IVSEPNLFYRF 247 (248)
T ss_dssp EEETTTEEEEE
T ss_pred EEcCCceEEEe
Confidence 99888776665
|
Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A. |
| >KOG2114|consensus | Back alignment and domain information |
|---|
Probab=98.41 E-value=4.1e-05 Score=78.84 Aligned_cols=201 Identities=19% Similarity=0.280 Sum_probs=131.9
Q ss_pred cEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe---CCEEEEEcCCCc-----EEEEECC
Q psy12614 28 VINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF---NDRLFSGGLQGF-----VNEYDMR 99 (708)
Q Consensus 28 ~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~---~~~l~s~~~d~~-----i~vwd~~ 99 (708)
.|+| +++.+..+|.|+.+|.|.+.+-.- ...+-+..+. .+|...-|. .++|++.+.|++ +++||++
T Consensus 27 ~isc--~~s~~~~vvigt~~G~V~~Ln~s~--~~~~~fqa~~--~siv~~L~~~~~~~~L~sv~Ed~~~np~llkiw~le 100 (933)
T KOG2114|consen 27 AISC--CSSSTGSVVIGTADGRVVILNSSF--QLIRGFQAYE--QSIVQFLYILNKQNFLFSVGEDEQGNPVLLKIWDLE 100 (933)
T ss_pred ceeE--EcCCCceEEEeeccccEEEecccc--eeeehheecc--hhhhhHhhcccCceEEEEEeecCCCCceEEEEeccc
Confidence 4444 688899999999999998887543 2223677777 554443444 358888887654 9999987
Q ss_pred CC---e---EeE--EEee-----cCCceEEEEEecCCCEEEEEeCCCcEEEEEcc--CCcEEEEEecccccccEEEEEEC
Q psy12614 100 RL---N---IKS--STAV-----TSGTCWCLSVHKKKRLLAAGTEQGHINLFQIS--DEGLLYEKLLDRQQGRILCTAWH 164 (708)
Q Consensus 100 ~~---~---~~~--~~~~-----~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~--~~~~~~~~~~~~~~~~v~~~~~s 164 (708)
.- + ++. .+.. ...++.+++.+.+-+.+|+|-.+|.|..+.-+ ...-..........++|+.+++.
T Consensus 101 k~~~n~sP~c~~~~ri~~~~np~~~~p~s~l~Vs~~l~~Iv~Gf~nG~V~~~~GDi~RDrgsr~~~~~~~~~pITgL~~~ 180 (933)
T KOG2114|consen 101 KVDKNNSPQCLYEHRIFTIKNPTNPSPASSLAVSEDLKTIVCGFTNGLVICYKGDILRDRGSRQDYSHRGKEPITGLALR 180 (933)
T ss_pred ccCCCCCcceeeeeeeeccCCCCCCCcceEEEEEccccEEEEEecCcEEEEEcCcchhccccceeeeccCCCCceeeEEe
Confidence 53 1 221 1222 34678999999999999999999999887532 11111112233346799999999
Q ss_pred CCCCE-EEEecCCeEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCeeEEEee
Q psy12614 165 SSGDY-LVTGCAAAVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDVK 241 (708)
Q Consensus 165 ~d~~~-l~~~~~d~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~~ 241 (708)
.+++. +.++....|.+|.+....+.... .. .+...+.|..+++... +++++. ..+.+|+......-..+.
T Consensus 181 ~d~~s~lFv~Tt~~V~~y~l~gr~p~~~~-ld-----~~G~~lnCss~~~~t~qfIca~~-e~l~fY~sd~~~~cfaf~ 252 (933)
T KOG2114|consen 181 SDGKSVLFVATTEQVMLYSLSGRTPSLKV-LD-----NNGISLNCSSFSDGTYQFICAGS-EFLYFYDSDGRGPCFAFE 252 (933)
T ss_pred cCCceeEEEEecceeEEEEecCCCcceee-ec-----cCCccceeeecCCCCccEEEecC-ceEEEEcCCCcceeeeec
Confidence 99887 44555558999998743322221 11 3367788888887654 666655 459999987554444444
|
|
| >PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=98.40 E-value=0.00064 Score=64.15 Aligned_cols=267 Identities=13% Similarity=0.073 Sum_probs=151.5
Q ss_pred CcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEe----------cCCeEEEEEccCCcccccCCCCCCCCcceE
Q psy12614 224 GFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAG----------VDPTVVCFQRTRKPQVCSTSGPEQGSSVWV 293 (708)
Q Consensus 224 g~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~----------~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~ 293 (708)
+.+.++|..+++.+..+.. +..-.+..+||++.+++++ ..-.|.+||..+ -. ..
T Consensus 17 ~rv~viD~d~~k~lGmi~~--g~~~~~~~spdgk~~y~a~T~~sR~~rG~RtDvv~~~D~~T--------L~------~~ 80 (342)
T PF06433_consen 17 SRVYVIDADSGKLLGMIDT--GFLGNVALSPDGKTIYVAETFYSRGTRGERTDVVEIWDTQT--------LS------PT 80 (342)
T ss_dssp EEEEEEETTTTEEEEEEEE--ESSEEEEE-TTSSEEEEEEEEEEETTEEEEEEEEEEEETTT--------TE------EE
T ss_pred ceEEEEECCCCcEEEEeec--ccCCceeECCCCCEEEEEEEEEeccccccceeEEEEEecCc--------Cc------cc
Confidence 4799999999998888764 4445577899999998753 234799999988 21 11
Q ss_pred EeEEEecc-cc----ceEEEEEe--CCEEEE--EcCCCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEEEcCCeE
Q psy12614 294 RSVNRVIH-EG----DVKSLALH--GNRLYS--GGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHL 364 (708)
Q Consensus 294 ~~~~~~~~-~~----~v~~l~~~--~~~l~s--~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i 364 (708)
....+..- .. ....++++ +++++. .+-...|.+-|+..++..... +.+....+--+.+..+...|.||.+
T Consensus 81 ~EI~iP~k~R~~~~~~~~~~~ls~dgk~~~V~N~TPa~SVtVVDl~~~kvv~ei-~~PGC~~iyP~~~~~F~~lC~DGsl 159 (342)
T PF06433_consen 81 GEIEIPPKPRAQVVPYKNMFALSADGKFLYVQNFTPATSVTVVDLAAKKVVGEI-DTPGCWLIYPSGNRGFSMLCGDGSL 159 (342)
T ss_dssp EEEEETTS-B--BS--GGGEEE-TTSSEEEEEEESSSEEEEEEETTTTEEEEEE-EGTSEEEEEEEETTEEEEEETTSCE
T ss_pred ceEecCCcchheecccccceEEccCCcEEEEEccCCCCeEEEEECCCCceeeee-cCCCEEEEEecCCCceEEEecCCce
Confidence 11122210 11 11112233 444433 233446666777666644333 3455555555566667777999999
Q ss_pred EEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceE-EEEeCC-CCcEEEEEcCCceEEEEEEecCCccee-E
Q psy12614 365 ELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIR-CSVVSN-DGKYVAYSTESCVRLHSLDLDGDKPQI-S 441 (708)
Q Consensus 365 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~~s~-~g~~l~~~~d~~i~i~~~~~~~~~~~~-~ 441 (708)
.-..+...-. ...+....+.....++. .-+++. .+.++..+..|.|+--++... ...+ .
T Consensus 160 ~~v~Ld~~Gk----------------~~~~~t~~F~~~~dp~f~~~~~~~~~~~~~F~Sy~G~v~~~dlsg~--~~~~~~ 221 (342)
T PF06433_consen 160 LTVTLDADGK----------------EAQKSTKVFDPDDDPLFEHPAYSRDGGRLYFVSYEGNVYSADLSGD--SAKFGK 221 (342)
T ss_dssp EEEEETSTSS----------------EEEEEEEESSTTTS-B-S--EEETTTTEEEEEBTTSEEEEEEETTS--SEEEEE
T ss_pred EEEEECCCCC----------------EeEeeccccCCCCcccccccceECCCCeEEEEecCCEEEEEeccCC--cccccC
Confidence 8888884330 01111122222223222 334443 345666677888887777652 2222 2
Q ss_pred EeecCCccc---c--cceeEEEEEecCCCeEEEEecCC---c-------EEEecCCCeEEEEEecCCCCCccCcceEEEE
Q psy12614 442 RIKNLPAPL---F--KSIFTHVLISADSTLLLAVSLNG---P-------LYIIDLSSLEIKYCVDPYKSNLMSDVISLVQ 506 (708)
Q Consensus 442 ~~~~~~~~~---~--~~~i~~~~~s~d~~~l~~~~~dg---~-------i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 506 (708)
....+.... + +....-+++++....|++.-..| . ||.++..+.+.+..+.. ...+.+++
T Consensus 222 ~~~~~t~~e~~~~WrPGG~Q~~A~~~~~~rlyvLMh~g~~gsHKdpgteVWv~D~~t~krv~Ri~l------~~~~~Si~ 295 (342)
T PF06433_consen 222 PWSLLTDAEKADGWRPGGWQLIAYHAASGRLYVLMHQGGEGSHKDPGTEVWVYDLKTHKRVARIPL------EHPIDSIA 295 (342)
T ss_dssp EEESS-HHHHHTTEEE-SSS-EEEETTTTEEEEEEEE--TT-TTS-EEEEEEEETTTTEEEEEEEE------EEEESEEE
T ss_pred cccccCccccccCcCCcceeeeeeccccCeEEEEecCCCCCCccCCceEEEEEECCCCeEEEEEeC------CCccceEE
Confidence 222121111 1 22233378887776666543222 1 99999888899988864 44788999
Q ss_pred ECCCCc-EEEEEe-cCCeEEEEECCce
Q psy12614 507 MSECKQ-YIVCAD-RKSHVVIWKNGQH 531 (708)
Q Consensus 507 ~s~~~~-~l~~~~-~d~~i~iw~~~~~ 531 (708)
.+.|.+ +|++.+ .++.+.+||..++
T Consensus 296 Vsqd~~P~L~~~~~~~~~l~v~D~~tG 322 (342)
T PF06433_consen 296 VSQDDKPLLYALSAGDGTLDVYDAATG 322 (342)
T ss_dssp EESSSS-EEEEEETTTTEEEEEETTT-
T ss_pred EccCCCcEEEEEcCCCCeEEEEeCcCC
Confidence 999877 554444 5799999999943
|
4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). |
| >KOG0882|consensus | Back alignment and domain information |
|---|
Probab=98.39 E-value=2.5e-06 Score=80.49 Aligned_cols=198 Identities=12% Similarity=0.089 Sum_probs=143.3
Q ss_pred CcEEEEEEe-CCEEEEEcCCCcEEEEECCC---CeEeEEEeecCCceEEEEEecCCCEEEEEeC-CCcEEEEEccCCcEE
Q psy12614 72 NSIECLTWF-NDRLFSGGLQGFVNEYDMRR---LNIKSSTAVTSGTCWCLSVHKKKRLLAAGTE-QGHINLFQISDEGLL 146 (708)
Q Consensus 72 ~~v~~l~~~-~~~l~s~~~d~~i~vwd~~~---~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~-d~~i~iwd~~~~~~~ 146 (708)
..|+.+.-. .+++.+++.||.++.|--.. -+.+..+..|.+.|.+++.+-++.++.+.+. |..++++|+++-...
T Consensus 10 d~i~hv~~tka~fiiqASlDGh~KFWkKs~isGvEfVKhFraHL~~I~sl~~S~dg~L~~Sv~d~Dhs~KvfDvEn~Dmi 89 (558)
T KOG0882|consen 10 DVITHVFPTKAKFIIQASLDGHKKFWKKSRISGVEFVKHFRAHLGVILSLAVSYDGWLFRSVEDPDHSVKVFDVENFDMI 89 (558)
T ss_pred ceeeeEeeehhheEEeeecchhhhhcCCCCccceeehhhhHHHHHHHHhhhccccceeEeeccCcccceeEEEeeccchh
Confidence 678887777 99999999999999997544 2345566789999999999999999999877 999999999977654
Q ss_pred EEEecccccccEEEEEECCC-C-CEEEEecCC--eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEc
Q psy12614 147 YEKLLDRQQGRILCTAWHSS-G-DYLVTGCAA--AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGD 221 (708)
Q Consensus 147 ~~~~~~~~~~~v~~~~~s~d-~-~~l~~~~~d--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~ 221 (708)
....+..-.+.+..+ .++. - ..|+....+ .+.++|-....+..-+... -|..+|.++.+++-+. +++..
T Consensus 90 nmiKL~~lPg~a~wv-~skGd~~s~IAVs~~~sg~i~VvD~~~d~~q~~~fkk-----lH~sPV~~i~y~qa~Ds~vSiD 163 (558)
T KOG0882|consen 90 NMIKLVDLPGFAEWV-TSKGDKISLIAVSLFKSGKIFVVDGFGDFCQDGYFKK-----LHFSPVKKIRYNQAGDSAVSID 163 (558)
T ss_pred hhcccccCCCceEEe-cCCCCeeeeEEeecccCCCcEEECCcCCcCccceecc-----cccCceEEEEeeccccceeecc
Confidence 222333333333222 2222 1 245555544 7999987654422222222 3488999999999885 88888
Q ss_pred CCCcEEEEeCCC------CeeEE---------EeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccC
Q psy12614 222 SGGFVRFWDGKT------GVQWS---------DVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTR 275 (708)
Q Consensus 222 ~dg~i~~wd~~~------~~~~~---------~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~ 275 (708)
..|.|.-|..+. .+... .+.-......++.|+|++..+.+-+.|..|+++...+
T Consensus 164 ~~gmVEyWs~e~~~qfPr~~l~~~~K~eTdLy~f~K~Kt~pts~Efsp~g~qistl~~DrkVR~F~~Kt 232 (558)
T KOG0882|consen 164 ISGMVEYWSAEGPFQFPRTNLNFELKHETDLYGFPKAKTEPTSFEFSPDGAQISTLNPDRKVRGFVFKT 232 (558)
T ss_pred ccceeEeecCCCcccCccccccccccccchhhcccccccCccceEEccccCcccccCcccEEEEEEecc
Confidence 899999999862 11111 1222456778999999999999999999999999998
|
|
| >PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats | Back alignment and domain information |
|---|
Probab=98.39 E-value=0.0012 Score=65.90 Aligned_cols=93 Identities=13% Similarity=0.128 Sum_probs=74.1
Q ss_pred EEEecCCCeEEEEEecCCCCCccCcceEEEEECCCCcEEEEEecCCeEEEEECCceeeecCCCCCCceEEEEcCCCCEEE
Q psy12614 476 LYIIDLSSLEIKYCVDPYKSNLMSDVISLVQMSECKQYIVCADRKSHVVIWKNGQHHASLPRYRKPSTAMAIHPTLSTLV 555 (708)
Q Consensus 476 i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~v~~l~~s~d~~~l~ 555 (708)
+|++..+..+.+......- ...+.+.+++|+...|+.|+.||.|.+||..+....+....-.++.++|+|+|..++
T Consensus 240 iYE~~r~klqrvsvtsipL----~s~v~~ca~sp~E~kLvlGC~DgSiiLyD~~~~~t~~~ka~~~P~~iaWHp~gai~~ 315 (545)
T PF11768_consen 240 IYECSRNKLQRVSVTSIPL----PSQVICCARSPSEDKLVLGCEDGSIILYDTTRGVTLLAKAEFIPTLIAWHPDGAIFV 315 (545)
T ss_pred EEEeecCceeEEEEEEEec----CCcceEEecCcccceEEEEecCCeEEEEEcCCCeeeeeeecccceEEEEcCCCcEEE
Confidence 6776655333332222111 568999999999999999999999999999977666666667789999999999999
Q ss_pred EEecCCcEEEEEcCCCC
Q psy12614 556 TVYSDHRIVEFDLNRKA 572 (708)
Q Consensus 556 ~~~~dg~i~vwd~~~~~ 572 (708)
+|+..|.+.+||+.-..
T Consensus 316 V~s~qGelQ~FD~ALsp 332 (545)
T PF11768_consen 316 VGSEQGELQCFDMALSP 332 (545)
T ss_pred EEcCCceEEEEEeecCc
Confidence 99999999999987543
|
|
| >PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators [] | Back alignment and domain information |
|---|
Probab=98.38 E-value=0.00045 Score=63.49 Aligned_cols=206 Identities=13% Similarity=0.083 Sum_probs=116.8
Q ss_pred eeeccCCCCcEEEEEEcCCCC-EEEEEeCCCcEEEEeCCCCCeEEEE-EecCCCCCcEEEEEEe-CCEEEEEc-CCCcEE
Q psy12614 19 IKFYAPEPKVINCIACEPKSS-RLAVSRADQSIEIWDISETPHVDRV-FIGDPLSNSIECLTWF-NDRLFSGG-LQGFVN 94 (708)
Q Consensus 19 ~~~~~~h~~~v~~~~~s~~~~-~la~~~~dg~v~iwd~~~~~~~~~~-~~~h~~~~~v~~l~~~-~~~l~s~~-~d~~i~ 94 (708)
.+-+.+-...+..++|+|+.+ ++|+..+.+.|...+.. |+.+++. +.+ . +....|++. ++.++... .++.+.
T Consensus 14 ~~~l~g~~~e~SGLTy~pd~~tLfaV~d~~~~i~els~~-G~vlr~i~l~g-~--~D~EgI~y~g~~~~vl~~Er~~~L~ 89 (248)
T PF06977_consen 14 AKPLPGILDELSGLTYNPDTGTLFAVQDEPGEIYELSLD-GKVLRRIPLDG-F--GDYEGITYLGNGRYVLSEERDQRLY 89 (248)
T ss_dssp EEE-TT--S-EEEEEEETTTTEEEEEETTTTEEEEEETT---EEEEEE-SS----SSEEEEEE-STTEEEEEETTTTEEE
T ss_pred eeECCCccCCccccEEcCCCCeEEEEECCCCEEEEEcCC-CCEEEEEeCCC-C--CCceeEEEECCCEEEEEEcCCCcEE
Confidence 456777778899999999865 55666777888888864 6666533 333 3 679999999 45555444 589999
Q ss_pred EEECCCCe------EeEEEe-----ecCCceEEEEEecCCCEEEEEeCCCcEEEEEccC---CcEEEEEecc------cc
Q psy12614 95 EYDMRRLN------IKSSTA-----VTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISD---EGLLYEKLLD------RQ 154 (708)
Q Consensus 95 vwd~~~~~------~~~~~~-----~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~---~~~~~~~~~~------~~ 154 (708)
+.++.... ....+. .+...+-.++|+|.++.|+++-+..-..+|.+.. .......... ..
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~kE~~P~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (248)
T PF06977_consen 90 IFTIDDDTTSLDRADVQKISLGFPNKGNKGFEGLAYDPKTNRLFVAKERKPKRLYEVNGFPGGFDLFVSDDQDLDDDKLF 169 (248)
T ss_dssp EEEE----TT--EEEEEEEE---S---SS--EEEEEETTTTEEEEEEESSSEEEEEEESTT-SS--EEEE-HHHH-HT--
T ss_pred EEEEeccccccchhhceEEecccccCCCcceEEEEEcCCCCEEEEEeCCCChhhEEEccccCccceeeccccccccccce
Confidence 99884321 112222 2445689999999988888887777777777764 2221111111 12
Q ss_pred cccEEEEEECCCCCEEEE-ecCC-eEEEEEcCCCceEEEEEecccCC--CCCceeEEEEEEccCCEEEEEcCCCcEEEE
Q psy12614 155 QGRILCTAWHSSGDYLVT-GCAA-AVRVWDIHKGHAIHKMSLDKSSK--FSKNTAVWCVAFCADFTIITGDSGGFVRFW 229 (708)
Q Consensus 155 ~~~v~~~~~s~d~~~l~~-~~~d-~i~iwd~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~l~~~~~dg~i~~w 229 (708)
...+.+++++|....|+. .... .|..+| .+|+.+..+......+ ...-...-.|+|.++|++...+.-+..+++
T Consensus 170 ~~d~S~l~~~p~t~~lliLS~es~~l~~~d-~~G~~~~~~~L~~g~~gl~~~~~QpEGIa~d~~G~LYIvsEpNlfy~f 247 (248)
T PF06977_consen 170 VRDLSGLSYDPRTGHLLILSDESRLLLELD-RQGRVVSSLSLDRGFHGLSKDIPQPEGIAFDPDGNLYIVSEPNLFYRF 247 (248)
T ss_dssp SS---EEEEETTTTEEEEEETTTTEEEEE--TT--EEEEEE-STTGGG-SS---SEEEEEE-TT--EEEEETTTEEEEE
T ss_pred eccccceEEcCCCCeEEEEECCCCeEEEEC-CCCCEEEEEEeCCcccCcccccCCccEEEECCCCCEEEEcCCceEEEe
Confidence 345789999997655544 4455 899999 6788888777653211 001245778999999987777776655544
|
Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A. |
| >PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats | Back alignment and domain information |
|---|
Probab=98.37 E-value=0.00016 Score=71.94 Aligned_cols=131 Identities=15% Similarity=0.103 Sum_probs=89.4
Q ss_pred EEEecCCCeEEEEEecCCCCCccCcceEEEEECC-CCcEEEEEe----cCCe----EEEEECC--ceee---ecCCCCCC
Q psy12614 476 LYIIDLSSLEIKYCVDPYKSNLMSDVISLVQMSE-CKQYIVCAD----RKSH----VVIWKNG--QHHA---SLPRYRKP 541 (708)
Q Consensus 476 i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~-~~~~l~~~~----~d~~----i~iw~~~--~~~~---~~~~~~~~ 541 (708)
++.+..+..+.+..+.+ +....++.||- +...+.+.. .+|. -.+|++. +..+ +--...+.
T Consensus 188 L~~~~~~klEvL~yirT------E~dPl~~~Fs~~~~~qi~tVE~s~s~~g~~~~d~ciYE~~r~klqrvsvtsipL~s~ 261 (545)
T PF11768_consen 188 LLSCSGGKLEVLSYIRT------ENDPLDVEFSLNQPYQIHTVEQSISVKGEPSADSCIYECSRNKLQRVSVTSIPLPSQ 261 (545)
T ss_pred EEEecCCcEEEEEEEEe------cCCcEEEEccCCCCcEEEEEEEecCCCCCceeEEEEEEeecCceeEEEEEEEecCCc
Confidence 44444444444444433 33446778876 344444432 2332 3456665 2222 33356789
Q ss_pred ceEEEEcCCCCEEEEEecCCcEEEEEcCCCCCCchhhhhhccCchhhhcCCCCeeEEEeCCCCCceEEEEcCeeEEEEec
Q psy12614 542 STAMAIHPTLSTLVTVYSDHRIVEFDLNRKAFTTFSRKLETNHPNEWLSRQLPVLGIEFDPQDSSLIYLMDDSALCVINK 621 (708)
Q Consensus 542 v~~l~~s~d~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~~~~l~~~~~d~~i~~wd~ 621 (708)
|.+.+++|+...|+.|+.||.|.+||...+... +....-....++|.|+|..+++++..|.+.+||+
T Consensus 262 v~~ca~sp~E~kLvlGC~DgSiiLyD~~~~~t~-------------~~ka~~~P~~iaWHp~gai~~V~s~qGelQ~FD~ 328 (545)
T PF11768_consen 262 VICCARSPSEDKLVLGCEDGSIILYDTTRGVTL-------------LAKAEFIPTLIAWHPDGAIFVVGSEQGELQCFDM 328 (545)
T ss_pred ceEEecCcccceEEEEecCCeEEEEEcCCCeee-------------eeeecccceEEEEcCCCcEEEEEcCCceEEEEEe
Confidence 999999999999999999999999999876422 2233445788999999999999999999999999
Q ss_pred CCCC
Q psy12614 622 NKSL 625 (708)
Q Consensus 622 ~~~~ 625 (708)
....
T Consensus 329 ALsp 332 (545)
T PF11768_consen 329 ALSP 332 (545)
T ss_pred ecCc
Confidence 7543
|
|
| >TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family | Back alignment and domain information |
|---|
Probab=98.36 E-value=0.0057 Score=64.11 Aligned_cols=197 Identities=12% Similarity=0.156 Sum_probs=118.5
Q ss_pred CCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcE----------EEEEEeCCEEEEEcCCCcEEEEECCCCeEeEEE
Q psy12614 38 SSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSI----------ECLTWFNDRLFSGGLQGFVNEYDMRRLNIKSST 107 (708)
Q Consensus 38 ~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v----------~~l~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~ 107 (708)
+.+|.+++.++.|.-.|..+|+.+=+.-..-. ..+ ..+++.++.++.++.|+.+.-.|.++|+.+...
T Consensus 69 ~g~vyv~s~~g~v~AlDa~TGk~lW~~~~~~~--~~~~~~~~~~~~~rg~av~~~~v~v~t~dg~l~ALDa~TGk~~W~~ 146 (527)
T TIGR03075 69 DGVMYVTTSYSRVYALDAKTGKELWKYDPKLP--DDVIPVMCCDVVNRGVALYDGKVFFGTLDARLVALDAKTGKVVWSK 146 (527)
T ss_pred CCEEEEECCCCcEEEEECCCCceeeEecCCCC--cccccccccccccccceEECCEEEEEcCCCEEEEEECCCCCEEeec
Confidence 45777777788999999999987642211111 111 123445778888999999999999999988776
Q ss_pred eec--C--CceEEEEEecCCCEEEEEeC------CCcEEEEEccCCcEEEEEeccccc----------------------
Q psy12614 108 AVT--S--GTCWCLSVHKKKRLLAAGTE------QGHINLFQISDEGLLYEKLLDRQQ---------------------- 155 (708)
Q Consensus 108 ~~~--~--~~v~~~~~s~~~~~la~~~~------d~~i~iwd~~~~~~~~~~~~~~~~---------------------- 155 (708)
... . ..+.+--.--++ .++++.. +|.|.-+|.++|+.+.........
T Consensus 147 ~~~~~~~~~~~tssP~v~~g-~Vivg~~~~~~~~~G~v~AlD~~TG~~lW~~~~~p~~~~~~~~~~~~~~~~~~~~tw~~ 225 (527)
T TIGR03075 147 KNGDYKAGYTITAAPLVVKG-KVITGISGGEFGVRGYVTAYDAKTGKLVWRRYTVPGDMGYLDKADKPVGGEPGAKTWPG 225 (527)
T ss_pred ccccccccccccCCcEEECC-EEEEeecccccCCCcEEEEEECCCCceeEeccCcCCCcccccccccccccccccCCCCC
Confidence 521 1 112111111134 4555432 688999999999887543322111
Q ss_pred -------ccE-EEEEECCCCCEEEEecC-----------------CeEEEEEcCCCceEEEEEecccCC--CCCceeEEE
Q psy12614 156 -------GRI-LCTAWHSSGDYLVTGCA-----------------AAVRVWDIHKGHAIHKMSLDKSSK--FSKNTAVWC 208 (708)
Q Consensus 156 -------~~v-~~~~~s~d~~~l~~~~~-----------------d~i~iwd~~~~~~~~~~~~~~~~~--~~~~~~v~~ 208 (708)
+.+ ..+++.|+..+++.+.. +.|.-.|+++|+..-.++..+... |.......-
T Consensus 226 ~~~~~gg~~~W~~~s~D~~~~lvy~~tGnp~p~~~~~r~gdnl~~~s~vAld~~TG~~~W~~Q~~~~D~wD~d~~~~p~l 305 (527)
T TIGR03075 226 DAWKTGGGATWGTGSYDPETNLIYFGTGNPSPWNSHLRPGDNLYTSSIVARDPDTGKIKWHYQTTPHDEWDYDGVNEMIL 305 (527)
T ss_pred CccccCCCCccCceeEcCCCCeEEEeCCCCCCCCCCCCCCCCccceeEEEEccccCCEEEeeeCCCCCCccccCCCCcEE
Confidence 011 13356665556655441 157778899999988877642111 000111111
Q ss_pred EEEccCCE----EEEEcCCCcEEEEeCCCCeeE
Q psy12614 209 VAFCADFT----IITGDSGGFVRFWDGKTGVQW 237 (708)
Q Consensus 209 ~~~~~~~~----l~~~~~dg~i~~wd~~~~~~~ 237 (708)
+....+|+ ++.+..+|.+++.|-.+|+.+
T Consensus 306 ~d~~~~G~~~~~v~~~~K~G~~~vlDr~tG~~i 338 (527)
T TIGR03075 306 FDLKKDGKPRKLLAHADRNGFFYVLDRTNGKLL 338 (527)
T ss_pred EEeccCCcEEEEEEEeCCCceEEEEECCCCcee
Confidence 22223552 668999999999999999876
|
This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens. |
| >PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A | Back alignment and domain information |
|---|
Probab=98.35 E-value=0.0026 Score=61.44 Aligned_cols=292 Identities=12% Similarity=0.045 Sum_probs=134.5
Q ss_pred ECCCCeEeEEEeecCCceE-----EEEEecCCCEEEEEeC---CCcEEEEEccCCcEEEEEeccccc-ccEEEEEECCCC
Q psy12614 97 DMRRLNIKSSTAVTSGTCW-----CLSVHKKKRLLAAGTE---QGHINLFQISDEGLLYEKLLDRQQ-GRILCTAWHSSG 167 (708)
Q Consensus 97 d~~~~~~~~~~~~~~~~v~-----~~~~s~~~~~la~~~~---d~~i~iwd~~~~~~~~~~~~~~~~-~~v~~~~~s~d~ 167 (708)
|..+|..+..+....+... .=+|.+||+.|+.++. ...+.+.|+.+++.. .+.... .......++|++
T Consensus 16 D~~TG~~VtrLT~~~~~~h~~YF~~~~ft~dG~kllF~s~~dg~~nly~lDL~t~~i~---QLTdg~g~~~~g~~~s~~~ 92 (386)
T PF14583_consen 16 DPDTGHRVTRLTPPDGHSHRLYFYQNCFTDDGRKLLFASDFDGNRNLYLLDLATGEIT---QLTDGPGDNTFGGFLSPDD 92 (386)
T ss_dssp -TTT--EEEE-S-TTS-EE---TTS--B-TTS-EEEEEE-TTSS-EEEEEETTT-EEE---E---SS-B-TTT-EE-TTS
T ss_pred CCCCCceEEEecCCCCcccceeecCCCcCCCCCEEEEEeccCCCcceEEEEcccCEEE---ECccCCCCCccceEEecCC
Confidence 6677777777764443322 2367889988777665 456888889999885 333322 223356677999
Q ss_pred CEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEc--cCCEEEEEcC----------------------
Q psy12614 168 DYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFC--ADFTIITGDS---------------------- 222 (708)
Q Consensus 168 ~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~l~~~~~---------------------- 222 (708)
+.++....+ .|+-.|+++.+....+..+ ...+-...|. .|++.+++..
T Consensus 93 ~~~~Yv~~~~~l~~vdL~T~e~~~vy~~p-------~~~~g~gt~v~n~d~t~~~g~e~~~~d~~~l~~~~~f~e~~~a~ 165 (386)
T PF14583_consen 93 RALYYVKNGRSLRRVDLDTLEERVVYEVP-------DDWKGYGTWVANSDCTKLVGIEISREDWKPLTKWKGFREFYEAR 165 (386)
T ss_dssp SEEEEEETTTEEEEEETTT--EEEEEE---------TTEEEEEEEEE-TTSSEEEEEEEEGGG-----SHHHHHHHHHC-
T ss_pred CeEEEEECCCeEEEEECCcCcEEEEEECC-------cccccccceeeCCCccEEEEEEEeehhccCccccHHHHHHHhhC
Confidence 888766555 8999999998876555554 4444444553 3555443321
Q ss_pred -CCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEecCC-----eEEEEEccCCcccccCCCCCCCCcceEEeE
Q psy12614 223 -GGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDP-----TVVCFQRTRKPQVCSTSGPEQGSSVWVRSV 296 (708)
Q Consensus 223 -dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg-----~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~ 296 (708)
...|.-.|+.+|+....+. ....+.-+.|+|....+++=+..| .-+||-+++ .. . ...
T Consensus 166 p~~~i~~idl~tG~~~~v~~-~~~wlgH~~fsP~dp~li~fCHEGpw~~Vd~RiW~i~~--------dg----~---~~~ 229 (386)
T PF14583_consen 166 PHCRIFTIDLKTGERKVVFE-DTDWLGHVQFSPTDPTLIMFCHEGPWDLVDQRIWTINT--------DG----S---NVK 229 (386)
T ss_dssp --EEEEEEETTT--EEEEEE-ESS-EEEEEEETTEEEEEEEEE-S-TTTSS-SEEEEET--------TS----------E
T ss_pred CCceEEEEECCCCceeEEEe-cCccccCcccCCCCCCEEEEeccCCcceeceEEEEEEc--------CC----C---cce
Confidence 1246667888877655444 456778899999765555544333 135666654 11 0 011
Q ss_pred EEeccc-cceEEE-EEe--CCEEEE-----EcCCCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEE-EcCC----
Q psy12614 297 NRVIHE-GDVKSL-ALH--GNRLYS-----GGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLL-QYTS---- 362 (708)
Q Consensus 297 ~~~~~~-~~v~~l-~~~--~~~l~s-----~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~-~~~~---- 362 (708)
.+..+. ..+..= -|. |..+.- ++.+..|.-+++.+..-+.+. ..+....+..++||++++. +.+.
T Consensus 230 ~v~~~~~~e~~gHEfw~~DG~~i~y~~~~~~~~~~~i~~~d~~t~~~~~~~-~~p~~~H~~ss~Dg~L~vGDG~d~p~~v 308 (386)
T PF14583_consen 230 KVHRRMEGESVGHEFWVPDGSTIWYDSYTPGGQDFWIAGYDPDTGERRRLM-EMPWCSHFMSSPDGKLFVGDGGDAPVDV 308 (386)
T ss_dssp ESS---TTEEEEEEEE-TTSS-EEEEEEETTT--EEEEEE-TTT--EEEEE-EE-SEEEEEE-TTSSEEEEEE-------
T ss_pred eeecCCCCcccccccccCCCCEEEEEeecCCCCceEEEeeCCCCCCceEEE-eCCceeeeEEcCCCCEEEecCCCCCccc
Confidence 111111 111111 122 333322 223445666677665533332 3334445677899999987 3332
Q ss_pred ------------eEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEE-----ecCCCc--eEEEEeCCCCcEEEE-Ec
Q psy12614 363 ------------HLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMS-----AVNNAT--IRCSVVSNDGKYVAY-ST 422 (708)
Q Consensus 363 ------------~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~--i~~~~~s~~g~~l~~-~~ 422 (708)
-|.+++...+. ...+.+.. ..+... =....|+|||++++. ++
T Consensus 309 ~~~~~~~~~~~p~i~~~~~~~~~------------------~~~l~~h~~sw~v~~~~~q~~hPhp~FSPDgk~VlF~Sd 370 (386)
T PF14583_consen 309 ADAGGYKIENDPWIYLFDVEAGR------------------FRKLARHDTSWKVLDGDRQVTHPHPSFSPDGKWVLFRSD 370 (386)
T ss_dssp ------------EEEEEETTTTE------------------EEEEEE-------BTTBSSTT----EE-TTSSEEEEEE-
T ss_pred cccccceecCCcEEEEeccccCc------------------eeeeeeccCcceeecCCCccCCCCCccCCCCCEEEEECC
Confidence 23344444322 01111110 011111 135789999999997 55
Q ss_pred -CCceEEEEEEe
Q psy12614 423 -ESCVRLHSLDL 433 (708)
Q Consensus 423 -d~~i~i~~~~~ 433 (708)
.|...||-++.
T Consensus 371 ~~G~~~vY~v~i 382 (386)
T PF14583_consen 371 MEGPPAVYLVEI 382 (386)
T ss_dssp TTSS-EEEEEE-
T ss_pred CCCCccEEEEeC
Confidence 78888887663
|
|
| >PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A | Back alignment and domain information |
|---|
Probab=98.33 E-value=0.0028 Score=61.14 Aligned_cols=323 Identities=11% Similarity=0.053 Sum_probs=137.1
Q ss_pred EEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE--EEEEcCCC--cEEEEeCCCCeeEEEeeccccCeEEEEEeCCC
Q psy12614 181 WDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT--IITGDSGG--FVRFWDGKTGVQWSDVKTHKKDILALTVSEDE 256 (708)
Q Consensus 181 wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--l~~~~~dg--~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~ 256 (708)
-|..+|..+.++..... + .|.-..+.=+|.+||+ ++++..+| .+.+.|+.+++..+...+.........++|+.
T Consensus 15 ~D~~TG~~VtrLT~~~~-~-~h~~YF~~~~ft~dG~kllF~s~~dg~~nly~lDL~t~~i~QLTdg~g~~~~g~~~s~~~ 92 (386)
T PF14583_consen 15 IDPDTGHRVTRLTPPDG-H-SHRLYFYQNCFTDDGRKLLFASDFDGNRNLYLLDLATGEITQLTDGPGDNTFGGFLSPDD 92 (386)
T ss_dssp E-TTT--EEEE-S-TTS---EE---TTS--B-TTS-EEEEEE-TTSS-EEEEEETTT-EEEE---SS-B-TTT-EE-TTS
T ss_pred eCCCCCceEEEecCCCC-c-ccceeecCCCcCCCCCEEEEEeccCCCcceEEEEcccCEEEECccCCCCCccceEEecCC
Confidence 46677777777764421 0 0011122236778884 44555554 67888999988776655433334456778988
Q ss_pred CEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEeCCEEEEEcCCCeEEEEeCCCCceee
Q psy12614 257 NYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALHGNRLYSGGLDSYLSLSYYPPKTLVK 336 (708)
Q Consensus 257 ~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~s~~~d~~i~iw~~~~~~~~~ 336 (708)
+.++.......++-.|+.+ .+ ....+.....-+-...+. +..|++..+--.....-.
T Consensus 93 ~~~~Yv~~~~~l~~vdL~T--------~e--------~~~vy~~p~~~~g~gt~v------~n~d~t~~~g~e~~~~d~- 149 (386)
T PF14583_consen 93 RALYYVKNGRSLRRVDLDT--------LE--------ERVVYEVPDDWKGYGTWV------ANSDCTKLVGIEISREDW- 149 (386)
T ss_dssp SEEEEEETTTEEEEEETTT------------------EEEEEE--TTEEEEEEEE------E-TTSSEEEEEEEEGGG--
T ss_pred CeEEEEECCCeEEEEECCc--------Cc--------EEEEEECCccccccccee------eCCCccEEEEEEEeehhc-
Confidence 8887766667899999988 43 222222333333222222 111222211100000000
Q ss_pred cCccCCCCceEEEEcCCcEEEEEcCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCc
Q psy12614 337 YPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGK 416 (708)
Q Consensus 337 ~~~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~ 416 (708)
. +... +..-..+....-...|.-.++.+++ . +........+..+.|||...
T Consensus 150 -~-~l~~-----~~~f~e~~~a~p~~~i~~idl~tG~---------------------~-~~v~~~~~wlgH~~fsP~dp 200 (386)
T PF14583_consen 150 -K-PLTK-----WKGFREFYEARPHCRIFTIDLKTGE---------------------R-KVVFEDTDWLGHVQFSPTDP 200 (386)
T ss_dssp ------S-----HHHHHHHHHC---EEEEEEETTT-----------------------E-EEEEEESS-EEEEEEETTEE
T ss_pred -c-Cccc-----cHHHHHHHhhCCCceEEEEECCCCc---------------------e-eEEEecCccccCcccCCCCC
Confidence 0 0000 0000000000111223344555544 1 12223456778899999655
Q ss_pred EEE-EEc----CCc-eEEEEEEecCCcceeEEeecCCcccccceeEEEEEecCCCeEEEEec--CCc---EEEecCCCeE
Q psy12614 417 YVA-YST----ESC-VRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVLISADSTLLLAVSL--NGP---LYIIDLSSLE 485 (708)
Q Consensus 417 ~l~-~~~----d~~-i~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~~~~~--dg~---i~~~~~~~~~ 485 (708)
-++ .+. +.. -+||-+...... ..+ +..+.....+.+=-|+|||..+..-+. .+. |..++..+.+
T Consensus 201 ~li~fCHEGpw~~Vd~RiW~i~~dg~~--~~~---v~~~~~~e~~gHEfw~~DG~~i~y~~~~~~~~~~~i~~~d~~t~~ 275 (386)
T PF14583_consen 201 TLIMFCHEGPWDLVDQRIWTINTDGSN--VKK---VHRRMEGESVGHEFWVPDGSTIWYDSYTPGGQDFWIAGYDPDTGE 275 (386)
T ss_dssp EEEEEEE-S-TTTSS-SEEEEETTS-----EE---SS---TTEEEEEEEE-TTSS-EEEEEEETTT--EEEEEE-TTT--
T ss_pred CEEEEeccCCcceeceEEEEEEcCCCc--cee---eecCCCCcccccccccCCCCEEEEEeecCCCCceEEEeeCCCCCC
Confidence 444 342 332 388999874433 333 333322446667789999998876443 232 5555444333
Q ss_pred EEEEecCCCCCccCcceEEEEECCCCcEEEEEecC----------------CeEEEEECCcee-eecCCCC---------
Q psy12614 486 IKYCVDPYKSNLMSDVISLVQMSECKQYIVCADRK----------------SHVVIWKNGQHH-ASLPRYR--------- 539 (708)
Q Consensus 486 ~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d----------------~~i~iw~~~~~~-~~~~~~~--------- 539 (708)
...... ......+.-++||++++-=+.| -.|++++++... ..+..|.
T Consensus 276 ~~~~~~-------~p~~~H~~ss~Dg~L~vGDG~d~p~~v~~~~~~~~~~~p~i~~~~~~~~~~~~l~~h~~sw~v~~~~ 348 (386)
T PF14583_consen 276 RRRLME-------MPWCSHFMSSPDGKLFVGDGGDAPVDVADAGGYKIENDPWIYLFDVEAGRFRKLARHDTSWKVLDGD 348 (386)
T ss_dssp EEEEEE-------E-SEEEEEE-TTSSEEEEEE-------------------EEEEEETTTTEEEEEEE-------BTTB
T ss_pred ceEEEe-------CCceeeeEEcCCCCEEEecCCCCCccccccccceecCCcEEEEeccccCceeeeeeccCcceeecCC
Confidence 322221 2245567788999887643332 156677777322 1222221
Q ss_pred C--CceEEEEcCCCCEEEEEe-cCCcEEEEEcC
Q psy12614 540 K--PSTAMAIHPTLSTLVTVY-SDHRIVEFDLN 569 (708)
Q Consensus 540 ~--~v~~l~~s~d~~~l~~~~-~dg~i~vwd~~ 569 (708)
. .=-...|+|||++++..+ ..|...||-++
T Consensus 349 ~q~~hPhp~FSPDgk~VlF~Sd~~G~~~vY~v~ 381 (386)
T PF14583_consen 349 RQVTHPHPSFSPDGKWVLFRSDMEGPPAVYLVE 381 (386)
T ss_dssp SSTT----EE-TTSSEEEEEE-TTSS-EEEEEE
T ss_pred CccCCCCCccCCCCCEEEEECCCCCCccEEEEe
Confidence 1 124689999999876654 46776666543
|
|
| >KOG2066|consensus | Back alignment and domain information |
|---|
Probab=98.32 E-value=3.9e-05 Score=78.37 Aligned_cols=182 Identities=13% Similarity=0.150 Sum_probs=127.8
Q ss_pred CcEEEEEEeCCEEEEEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEec
Q psy12614 72 NSIECLTWFNDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLL 151 (708)
Q Consensus 72 ~~v~~l~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~ 151 (708)
..+.|+++++..++-|+.+|.|++.+.+..- .+...|... ..+|.++|+|+.||.|.|-.+-+.+......+
T Consensus 40 D~is~~av~~~~~~~GtH~g~v~~~~~~~~~--~~~~~~s~~------~~~Gey~asCS~DGkv~I~sl~~~~~~~~~df 111 (846)
T KOG2066|consen 40 DAISCCAVHDKFFALGTHRGAVYLTTCQGNP--KTNFDHSSS------ILEGEYVASCSDDGKVVIGSLFTDDEITQYDF 111 (846)
T ss_pred hHHHHHHhhcceeeeccccceEEEEecCCcc--ccccccccc------ccCCceEEEecCCCcEEEeeccCCccceeEec
Confidence 5678888889999999999999999976543 333344333 66899999999999999999888776532333
Q ss_pred ccccccEEEEEECCC-----CCEEEEecCCeEEEEEcCC-CceEE-EEEecccCCCCCceeEEEEEEccCCEEEEEcCCC
Q psy12614 152 DRQQGRILCTAWHSS-----GDYLVTGCAAAVRVWDIHK-GHAIH-KMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGG 224 (708)
Q Consensus 152 ~~~~~~v~~~~~s~d-----~~~l~~~~~d~i~iwd~~~-~~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg 224 (708)
..++.+++++|| .+.+++|+...+.++.-.= |.... .+. ...++|.++.|. |.+++-..|-
T Consensus 112 ---~rpiksial~Pd~~~~~sk~fv~GG~aglvL~er~wlgnk~~v~l~-------~~eG~I~~i~W~--g~lIAWand~ 179 (846)
T KOG2066|consen 112 ---KRPIKSIALHPDFSRQQSKQFVSGGMAGLVLSERNWLGNKDSVVLS-------EGEGPIHSIKWR--GNLIAWANDD 179 (846)
T ss_pred ---CCcceeEEeccchhhhhhhheeecCcceEEEehhhhhcCccceeee-------cCccceEEEEec--CcEEEEecCC
Confidence 567999999998 4677877766655554221 11111 122 338899999996 4466666666
Q ss_pred cEEEEeCCCCeeEEEeeccccCe------EEEEEeCCCCEEEEEecCCeEEEEEccC
Q psy12614 225 FVRFWDGKTGVQWSDVKTHKKDI------LALTVSEDENYLYCAGVDPTVVCFQRTR 275 (708)
Q Consensus 225 ~i~~wd~~~~~~~~~~~~~~~~i------~~~~~s~~~~~l~~~~~dg~i~iw~~~~ 275 (708)
-|++||..+++.+..++.....+ ..+.|.++. .|+.|-.| +|++..++.
T Consensus 180 Gv~vyd~~~~~~l~~i~~p~~~~R~e~fpphl~W~~~~-~LVIGW~d-~v~i~~I~~ 234 (846)
T KOG2066|consen 180 GVKVYDTPTRQRLTNIPPPSQSVRPELFPPHLHWQDED-RLVIGWGD-SVKICSIKK 234 (846)
T ss_pred CcEEEeccccceeeccCCCCCCCCcccCCCceEecCCC-eEEEecCC-eEEEEEEec
Confidence 69999999998888776433333 346777665 55556544 788888774
|
|
| >PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment | Back alignment and domain information |
|---|
Probab=98.32 E-value=0.00018 Score=72.58 Aligned_cols=193 Identities=12% Similarity=0.086 Sum_probs=101.0
Q ss_pred EEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEc
Q psy12614 105 SSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDI 183 (708)
Q Consensus 105 ~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~ 183 (708)
+.+.........+.++|+|+++++ +.+|.-.|+......-. . .+.-...+|.+.++ +|+-... .|.++.-
T Consensus 26 k~lg~~~~~p~~ls~npngr~v~V-~g~geY~iyt~~~~r~k---~----~G~g~~~vw~~~n~-yAv~~~~~~I~I~kn 96 (443)
T PF04053_consen 26 KELGSCEIYPQSLSHNPNGRFVLV-CGDGEYEIYTALAWRNK---A----FGSGLSFVWSSRNR-YAVLESSSTIKIYKN 96 (443)
T ss_dssp EEEEE-SS--SEEEE-TTSSEEEE-EETTEEEEEETTTTEEE---E----EEE-SEEEE-TSSE-EEEE-TTS-EEEEET
T ss_pred ccCCCCCcCCeeEEECCCCCEEEE-EcCCEEEEEEccCCccc---c----cCceeEEEEecCcc-EEEEECCCeEEEEEc
Confidence 344455566889999999999988 56788888874333321 1 24456788988665 5555546 8888643
Q ss_pred CCCceEEEEEecccCCCCCceeEEEEEEccCCEEEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEe
Q psy12614 184 HKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAG 263 (708)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~ 263 (708)
-+.+....+..+ ..+..+.. |.++....++.|.+||+++++.+..+... +|..+.|++++++++..+
T Consensus 97 ~~~~~~k~i~~~--------~~~~~If~---G~LL~~~~~~~i~~yDw~~~~~i~~i~v~--~vk~V~Ws~~g~~val~t 163 (443)
T PF04053_consen 97 FKNEVVKSIKLP--------FSVEKIFG---GNLLGVKSSDFICFYDWETGKLIRRIDVS--AVKYVIWSDDGELVALVT 163 (443)
T ss_dssp TEE-TT-----S--------S-EEEEE----SSSEEEEETTEEEEE-TTT--EEEEESS---E-EEEEE-TTSSEEEEE-
T ss_pred CccccceEEcCC--------cccceEEc---CcEEEEECCCCEEEEEhhHcceeeEEecC--CCcEEEEECCCCEEEEEe
Confidence 333333344332 22333333 76555555568999999999999998743 389999999999999888
Q ss_pred cCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEeCCEEEEEcCCCeEEE
Q psy12614 264 VDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALHGNRLYSGGLDSYLSL 326 (708)
Q Consensus 264 ~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~s~~~d~~i~i 326 (708)
.+ .+.+++.....-.. ..++.-...+ .....-...|.+.+|.++.++-.+.. .++.
T Consensus 164 ~~-~i~il~~~~~~~~~--~~~~g~e~~f---~~~~E~~~~IkSg~W~~d~fiYtT~~-~lkY 219 (443)
T PF04053_consen 164 KD-SIYILKYNLEAVAA--IPEEGVEDAF---ELIHEISERIKSGCWVEDCFIYTTSN-HLKY 219 (443)
T ss_dssp S--SEEEEEE-HHHHHH--BTTTB-GGGE---EEEEEE-S--SEEEEETTEEEEE-TT-EEEE
T ss_pred CC-eEEEEEecchhccc--ccccCchhce---EEEEEecceeEEEEEEcCEEEEEcCC-eEEE
Confidence 65 67777655400000 0000001111 12222256788999996666665555 6665
|
This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B. |
| >KOG1645|consensus | Back alignment and domain information |
|---|
Probab=98.27 E-value=6.5e-05 Score=70.34 Aligned_cols=91 Identities=14% Similarity=0.228 Sum_probs=73.6
Q ss_pred EEEEeCCCCCeEEEEEecCCCCCcEEEEEEe---CCEEEEEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCC-E
Q psy12614 50 IEIWDISETPHVDRVFIGDPLSNSIECLTWF---NDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKR-L 125 (708)
Q Consensus 50 v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~---~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~-~ 125 (708)
|+..+..+-+... .+.+|. ..|..++|+ ...+..++.+.+|+|.|+++...+..+..+ ..+++++|.-|.. +
T Consensus 175 v~~l~~~~fkssq-~lp~~g--~~IrdlafSp~~~GLl~~asl~nkiki~dlet~~~vssy~a~-~~~wSC~wDlde~h~ 250 (463)
T KOG1645|consen 175 VQKLESHDFKSSQ-ILPGEG--SFIRDLAFSPFNEGLLGLASLGNKIKIMDLETSCVVSSYIAY-NQIWSCCWDLDERHV 250 (463)
T ss_pred eEEeccCCcchhh-cccccc--hhhhhhccCccccceeeeeccCceEEEEecccceeeeheecc-CCceeeeeccCCcce
Confidence 4444444444444 667777 899999999 447889999999999999999999998888 8899999998765 6
Q ss_pred EEEEeCCCcEEEEEccCCc
Q psy12614 126 LAAGTEQGHINLFQISDEG 144 (708)
Q Consensus 126 la~~~~d~~i~iwd~~~~~ 144 (708)
+..|...|.|.+||++..+
T Consensus 251 IYaGl~nG~VlvyD~R~~~ 269 (463)
T KOG1645|consen 251 IYAGLQNGMVLVYDMRQPE 269 (463)
T ss_pred eEEeccCceEEEEEccCCC
Confidence 6677789999999998654
|
|
| >COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=98.23 E-value=4.8e-05 Score=76.34 Aligned_cols=186 Identities=15% Similarity=0.104 Sum_probs=113.1
Q ss_pred cCCCceEEEEeCCCCcEEEEE---cC--CceEEEEEEecCCcceeEEeecCCcccccceeEEEEEecCCCeEEEEec-CC
Q psy12614 401 VNNATIRCSVVSNDGKYVAYS---TE--SCVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVLISADSTLLLAVSL-NG 474 (708)
Q Consensus 401 ~~~~~i~~~~~s~~g~~l~~~---~d--~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~~~~~-dg 474 (708)
.....+..-+|+|+++.++.. .. ..+.++++..+.....+. +.++.. . .+|||||+.|+.... ||
T Consensus 190 ~~~~~~~~p~ws~~~~~~~y~~f~~~~~~~i~~~~l~~g~~~~i~~----~~g~~~--~---P~fspDG~~l~f~~~rdg 260 (425)
T COG0823 190 DSGSLILTPAWSPDGKKLAYVSFELGGCPRIYYLDLNTGKRPVILN----FNGNNG--A---PAFSPDGSKLAFSSSRDG 260 (425)
T ss_pred ccCcceeccccCcCCCceEEEEEecCCCceEEEEeccCCccceeec----cCCccC--C---ccCCCCCCEEEEEECCCC
Confidence 334556777899999998863 23 358888888755442222 444432 3 689999998887654 45
Q ss_pred c--EEEecCCCeEEEEEecCCCCCccCcceEEEEECCCCcEEEEEecC-C--eEEEEECC-ceeeecCCCCCCceEEEEc
Q psy12614 475 P--LYIIDLSSLEIKYCVDPYKSNLMSDVISLVQMSECKQYIVCADRK-S--HVVIWKNG-QHHASLPRYRKPSTAMAIH 548 (708)
Q Consensus 475 ~--i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d-~--~i~iw~~~-~~~~~~~~~~~~v~~l~~s 548 (708)
. ||.++..... +..+....+. -+.-.|+|||++++..+.. | .|.+++.+ +....+......-....++
T Consensus 261 ~~~iy~~dl~~~~-~~~Lt~~~gi-----~~~Ps~spdG~~ivf~Sdr~G~p~I~~~~~~g~~~~riT~~~~~~~~p~~S 334 (425)
T COG0823 261 SPDIYLMDLDGKN-LPRLTNGFGI-----NTSPSWSPDGSKIVFTSDRGGRPQIYLYDLEGSQVTRLTFSGGGNSNPVWS 334 (425)
T ss_pred CccEEEEcCCCCc-ceecccCCcc-----ccCccCCCCCCEEEEEeCCCCCcceEEECCCCCceeEeeccCCCCcCccCC
Confidence 5 7766654333 3334444332 3378899999999987643 3 56666666 2222333222222378899
Q ss_pred CCCCEEEEEecC-Cc--EEEEEcCCCCCCchhhhhhccCchhhhcCCCCeeEEEeCCCCCceEEEEcC
Q psy12614 549 PTLSTLVTVYSD-HR--IVEFDLNRKAFTTFSRKLETNHPNEWLSRQLPVLGIEFDPQDSSLIYLMDD 613 (708)
Q Consensus 549 ~d~~~l~~~~~d-g~--i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~~~~l~~~~~d 613 (708)
|||++|+..+.. |. |.+.|+.++... .............|.++++.++..+..
T Consensus 335 pdG~~i~~~~~~~g~~~i~~~~~~~~~~~------------~~lt~~~~~e~ps~~~ng~~i~~~s~~ 390 (425)
T COG0823 335 PDGDKIVFESSSGGQWDIDKNDLASGGKI------------RILTSTYLNESPSWAPNGRMIMFSSGQ 390 (425)
T ss_pred CCCCEEEEEeccCCceeeEEeccCCCCcE------------EEccccccCCCCCcCCCCceEEEeccC
Confidence 999999988753 44 666666655421 111122334445778888877655543
|
|
| >KOG2114|consensus | Back alignment and domain information |
|---|
Probab=98.20 E-value=0.00078 Score=69.83 Aligned_cols=195 Identities=14% Similarity=0.153 Sum_probs=128.9
Q ss_pred EEccCC-EEEEEcCCCcEEEEeCCCCeeEEEeeccccC-eEEEEEeCCCCEEEEEecCC-----eEEEEEccCCcccccC
Q psy12614 210 AFCADF-TIITGDSGGFVRFWDGKTGVQWSDVKTHKKD-ILALTVSEDENYLYCAGVDP-----TVVCFQRTRKPQVCST 282 (708)
Q Consensus 210 ~~~~~~-~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~-i~~~~~s~~~~~l~~~~~dg-----~i~iw~~~~~~~~~~~ 282 (708)
+|++.+ .++.|+.+|.|.+++- ..+.++.+..+... |..+-...+.++|++.+.|+ .+++|+++.
T Consensus 30 c~~s~~~~vvigt~~G~V~~Ln~-s~~~~~~fqa~~~siv~~L~~~~~~~~L~sv~Ed~~~np~llkiw~lek------- 101 (933)
T KOG2114|consen 30 CCSSSTGSVVIGTADGRVVILNS-SFQLIRGFQAYEQSIVQFLYILNKQNFLFSVGEDEQGNPVLLKIWDLEK------- 101 (933)
T ss_pred EEcCCCceEEEeeccccEEEecc-cceeeehheecchhhhhHhhcccCceEEEEEeecCCCCceEEEEecccc-------
Confidence 344544 6999999999999983 45566778877777 55555555557888877765 489999987
Q ss_pred CCCCCCCcceEEeEEEec-----cccceEEEEEe--CCEEEEEcCCCeEEEEeCCC---Cceee-c-CccCCCCceEEEE
Q psy12614 283 SGPEQGSSVWVRSVNRVI-----HEGDVKSLALH--GNRLYSGGLDSYLSLSYYPP---KTLVK-Y-PCTLAQSTPVSLA 350 (708)
Q Consensus 283 ~g~~~~~~~~~~~~~~~~-----~~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~---~~~~~-~-~~~~~~~~~~~~s 350 (708)
-+....+.......... ...++.+++.+ -..++.|-.+|.|..+.-+- ...+. + ......++.+++.
T Consensus 102 -~~~n~sP~c~~~~ri~~~~np~~~~p~s~l~Vs~~l~~Iv~Gf~nG~V~~~~GDi~RDrgsr~~~~~~~~~pITgL~~~ 180 (933)
T KOG2114|consen 102 -VDKNNSPQCLYEHRIFTIKNPTNPSPASSLAVSEDLKTIVCGFTNGLVICYKGDILRDRGSRQDYSHRGKEPITGLALR 180 (933)
T ss_pred -cCCCCCcceeeeeeeeccCCCCCCCcceEEEEEccccEEEEEecCcEEEEEcCcchhccccceeeeccCCCCceeeEEe
Confidence 22111133332223333 24567788888 67888888999988874321 11111 1 1133456788898
Q ss_pred cCCcE-EEEEcCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEEEcCCceEEE
Q psy12614 351 KDIQH-VLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYSTESCVRLH 429 (708)
Q Consensus 351 ~~~~~-l~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~d~~i~i~ 429 (708)
.+++. +.+.....|.+|.+.... ....+...+...+.|.++++...-++++.+..+.+|
T Consensus 181 ~d~~s~lFv~Tt~~V~~y~l~gr~--------------------p~~~~ld~~G~~lnCss~~~~t~qfIca~~e~l~fY 240 (933)
T KOG2114|consen 181 SDGKSVLFVATTEQVMLYSLSGRT--------------------PSLKVLDNNGISLNCSSFSDGTYQFICAGSEFLYFY 240 (933)
T ss_pred cCCceeEEEEecceeEEEEecCCC--------------------cceeeeccCCccceeeecCCCCccEEEecCceEEEE
Confidence 88887 445677889999988422 234445566777888888876655777777889999
Q ss_pred EEEe
Q psy12614 430 SLDL 433 (708)
Q Consensus 430 ~~~~ 433 (708)
+.+.
T Consensus 241 ~sd~ 244 (933)
T KOG2114|consen 241 DSDG 244 (933)
T ss_pred cCCC
Confidence 9875
|
|
| >PRK02888 nitrous-oxide reductase; Validated | Back alignment and domain information |
|---|
Probab=98.12 E-value=0.00044 Score=70.81 Aligned_cols=206 Identities=11% Similarity=0.082 Sum_probs=121.9
Q ss_pred EcCCCCEEEEE-eCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECCCCeEeEEEeec
Q psy12614 34 CEPKSSRLAVS-RADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMRRLNIKSSTAVT 110 (708)
Q Consensus 34 ~s~~~~~la~~-~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~ 110 (708)
++|||+.+... -..+.+.+.|.++.+......-+ +....++++ |+++++.+.+. +.+..+..+...
T Consensus 200 lpnDGk~l~~~~ey~~~vSvID~etmeV~~qV~Vd----gnpd~v~~spdGk~afvTsyNs-------E~G~tl~em~a~ 268 (635)
T PRK02888 200 LPNDGKDLDDPKKYRSLFTAVDAETMEVAWQVMVD----GNLDNVDTDYDGKYAFSTCYNS-------EEGVTLAEMMAA 268 (635)
T ss_pred cCCCCCEeecccceeEEEEEEECccceEEEEEEeC----CCcccceECCCCCEEEEeccCc-------ccCcceeeeccc
Confidence 45667655332 33456777777776555433333 223445555 77777665321 222222222211
Q ss_pred CCceEEEEE--------ecCCCEEEEEeCCCcEEEEEccC----C-cEEEEEecccccccEEEEEECCCCCEEEEecCC-
Q psy12614 111 SGTCWCLSV--------HKKKRLLAAGTEQGHINLFQISD----E-GLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA- 176 (708)
Q Consensus 111 ~~~v~~~~~--------s~~~~~la~~~~d~~i~iwd~~~----~-~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d- 176 (708)
... ..+.| .++|++... .++.|.+.|..+ + +.+ ..+ .-......+.++|||+++++++.-
T Consensus 269 e~d-~~vvfni~~iea~vkdGK~~~V--~gn~V~VID~~t~~~~~~~v~--~yI-PVGKsPHGV~vSPDGkylyVanklS 342 (635)
T PRK02888 269 ERD-WVVVFNIARIEEAVKAGKFKTI--GGSKVPVVDGRKAANAGSALT--RYV-PVPKNPHGVNTSPDGKYFIANGKLS 342 (635)
T ss_pred cCc-eEEEEchHHHHHhhhCCCEEEE--CCCEEEEEECCccccCCcceE--EEE-ECCCCccceEECCCCCEEEEeCCCC
Confidence 111 33333 457776665 367899999887 3 333 222 234567889999999999888764
Q ss_pred -eEEEEEcCCCce------------EEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCC---------
Q psy12614 177 -AVRVWDIHKGHA------------IHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKT--------- 233 (708)
Q Consensus 177 -~i~iwd~~~~~~------------~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~--------- 233 (708)
++.|.|+.+.+. ..+...+ ......+|.++|. +.+...|.+|..||+..
T Consensus 343 ~tVSVIDv~k~k~~~~~~~~~~~~vvaevevG--------lGPLHTaFDg~G~aytslf~dsqv~kwn~~~a~~~~~g~~ 414 (635)
T PRK02888 343 PTVTVIDVRKLDDLFDGKIKPRDAVVAEPELG--------LGPLHTAFDGRGNAYTTLFLDSQIVKWNIEAAIRAYKGEK 414 (635)
T ss_pred CcEEEEEChhhhhhhhccCCccceEEEeeccC--------CCcceEEECCCCCEEEeEeecceeEEEehHHHHHHhcccc
Confidence 999999987653 3333332 2344678888886 66777899999999876
Q ss_pred -CeeEEEeeccccC-----eEEEEEeCCCCEEEEEec
Q psy12614 234 -GVQWSDVKTHKKD-----ILALTVSEDENYLYCAGV 264 (708)
Q Consensus 234 -~~~~~~~~~~~~~-----i~~~~~s~~~~~l~~~~~ 264 (708)
...+..+.-|-.+ ...=.-.|||++|++...
T Consensus 415 ~~~v~~k~dV~y~pgh~~~~~g~t~~~dgk~l~~~nk 451 (635)
T PRK02888 415 VDPIVQKLDVHYQPGHNHASMGETKEADGKWLVSLNK 451 (635)
T ss_pred CCcceecccCCCccceeeecCCCcCCCCCCEEEEccc
Confidence 2344444333222 222234678888887654
|
|
| >KOG3621|consensus | Back alignment and domain information |
|---|
Probab=98.06 E-value=0.0014 Score=66.50 Aligned_cols=143 Identities=16% Similarity=0.181 Sum_probs=102.3
Q ss_pred cCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCce
Q psy12614 110 TSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHA 188 (708)
Q Consensus 110 ~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~ 188 (708)
+...|.--+++..+++++.|+..|.+++|+-.+++... ....+..+.+..+..+++..++|.|+.. .|.++-+..+..
T Consensus 32 ~~~~v~lTc~dst~~~l~~GsS~G~lyl~~R~~~~~~~-~~~~~~~~~~~~~~vs~~e~lvAagt~~g~V~v~ql~~~~p 110 (726)
T KOG3621|consen 32 FPARVKLTCVDATEEYLAMGSSAGSVYLYNRHTGEMRK-LKNEGATGITCVRSVSSVEYLVAAGTASGRVSVFQLNKELP 110 (726)
T ss_pred CcceEEEEEeecCCceEEEecccceEEEEecCchhhhc-ccccCccceEEEEEecchhHhhhhhcCCceEEeehhhccCC
Confidence 34456666777888999999999999999988887642 2333455667778889999888888888 898888876443
Q ss_pred EEEEEecccCCCCCceeEEEEEEccCC-EEEEEcCCCcEEEEeCCCC----eeEEEeeccccCeEEEEEeC
Q psy12614 189 IHKMSLDKSSKFSKNTAVWCVAFCADF-TIITGDSGGFVRFWDGKTG----VQWSDVKTHKKDILALTVSE 254 (708)
Q Consensus 189 ~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~~~~~dg~i~~wd~~~~----~~~~~~~~~~~~i~~~~~s~ 254 (708)
.......+... .|...|++++|++|+ ++.+|+..|.|..-.+.+. ...+.+....+.|..+.+..
T Consensus 111 ~~~~~~t~~d~-~~~~rVTal~Ws~~~~k~ysGD~~Gkv~~~~L~s~~~~~~~~q~il~~ds~IVQlD~~q 180 (726)
T KOG3621|consen 111 RDLDYVTPCDK-SHKCRVTALEWSKNGMKLYSGDSQGKVVLTELDSRQAFLSKSQEILSEDSEIVQLDYLQ 180 (726)
T ss_pred Ccceeeccccc-cCCceEEEEEecccccEEeecCCCceEEEEEechhhhhccccceeeccCcceEEeeccc
Confidence 33332222222 348899999999999 5999999999999888762 11233333556777776653
|
|
| >PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex | Back alignment and domain information |
|---|
Probab=98.05 E-value=0.0086 Score=60.69 Aligned_cols=243 Identities=14% Similarity=0.102 Sum_probs=118.8
Q ss_pred cEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEec-----ccccccEEEEEECCC
Q psy12614 92 FVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLL-----DRQQGRILCTAWHSS 166 (708)
Q Consensus 92 ~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~-----~~~~~~v~~~~~s~d 166 (708)
.|.+|+.. |+++.++.-..+.|.++.|+.+.. |++...||.++++|+.+.. .+.... .-....+....+..+
T Consensus 62 ~I~iys~s-G~ll~~i~w~~~~iv~~~wt~~e~-LvvV~~dG~v~vy~~~G~~-~fsl~~~i~~~~v~e~~i~~~~~~~~ 138 (410)
T PF04841_consen 62 SIQIYSSS-GKLLSSIPWDSGRIVGMGWTDDEE-LVVVQSDGTVRVYDLFGEF-QFSLGEEIEEEKVLECRIFAIWFYKN 138 (410)
T ss_pred EEEEECCC-CCEeEEEEECCCCEEEEEECCCCe-EEEEEcCCEEEEEeCCCce-eechhhhccccCcccccccccccCCC
Confidence 36666643 345555554448899999998655 5556799999999987444 211111 111223333455556
Q ss_pred CCEEEEecCCeEEEEE-cCCCceEEEEE-ecccCC-CCCceeEEE-EEEccCCE-EEEEcCCCcEEEEeCCCCeeEEEee
Q psy12614 167 GDYLVTGCAAAVRVWD-IHKGHAIHKMS-LDKSSK-FSKNTAVWC-VAFCADFT-IITGDSGGFVRFWDGKTGVQWSDVK 241 (708)
Q Consensus 167 ~~~l~~~~~d~i~iwd-~~~~~~~~~~~-~~~~~~-~~~~~~v~~-~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~~ 241 (708)
|-.+++... .+.+.+ .......+.+. .+.... +........ ..++.+.. .+....++.+.+.+-...+. +.
T Consensus 139 GivvLt~~~-~~~~v~n~~~~~~~~~~~~~p~~~~~~~~~~~~~~i~~l~~~~~~~i~~~~g~~i~~i~~~~~~~---i~ 214 (410)
T PF04841_consen 139 GIVVLTGNN-RFYVVNNIDEPVKLRRLPEIPGLWTKFHWWPSWTVIPLLSSDRVVEILLANGETIYIIDENSFKQ---ID 214 (410)
T ss_pred CEEEECCCC-eEEEEeCccccchhhccccCCCcccccccccccccceEeecCcceEEEEecCCEEEEEEcccccc---cc
Confidence 644444333 333332 22111111111 000000 000000111 12333332 33333445555444322111 22
Q ss_pred ccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEec-cccceEEEEEeCCEEEEEcC
Q psy12614 242 THKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVI-HEGDVKSLALHGNRLYSGGL 320 (708)
Q Consensus 242 ~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~v~~l~~~~~~l~s~~~ 320 (708)
..+++..+++||+++++|.-..+|.+.+.+..- .+ ....+.. -......+.|.|+-.+....
T Consensus 215 -~~~~i~~iavSpng~~iAl~t~~g~l~v~ssDf--------~~--------~~~e~~~~~~~~p~~~~WCG~dav~l~~ 277 (410)
T PF04841_consen 215 -SDGPIIKIAVSPNGKFIALFTDSGNLWVVSSDF--------SE--------KLCEFDTDSKSPPKQMAWCGNDAVVLSW 277 (410)
T ss_pred -CCCCeEEEEECCCCCEEEEEECCCCEEEEECcc--------cc--------eeEEeecCcCCCCcEEEEECCCcEEEEe
Confidence 246899999999999999999999998887654 22 1222222 23456778887442222222
Q ss_pred CCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEEEcCCeEEEEEecC
Q psy12614 321 DSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSLGS 371 (708)
Q Consensus 321 d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~ 371 (708)
...+.+.. +....+.+..++..++...-..++|.....
T Consensus 278 ~~~l~lvg-------------~~~~~~~~~~~~~~~l~~E~DG~riit~~~ 315 (410)
T PF04841_consen 278 EDELLLVG-------------PDGDSISFWYDGPVILVSEIDGVRIITSTS 315 (410)
T ss_pred CCEEEEEC-------------CCCCceEEeccCceEEeccCCceEEEeCCc
Confidence 33444432 222334444455545555444566665443
|
Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm |
| >PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals | Back alignment and domain information |
|---|
Probab=98.04 E-value=0.018 Score=57.47 Aligned_cols=241 Identities=17% Similarity=0.200 Sum_probs=135.0
Q ss_pred ceEEEEEecCCCEEEEEeCCCcEEEEEccCCcE-----------------------------------------EEEEec
Q psy12614 113 TCWCLSVHKKKRLLAAGTEQGHINLFQISDEGL-----------------------------------------LYEKLL 151 (708)
Q Consensus 113 ~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~-----------------------------------------~~~~~~ 151 (708)
.|+.+.|+++..-||+|...|.|.+|.+...+. .....+
T Consensus 3 ~v~~vs~a~~t~Elav~~~~GeVv~~k~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~di~~r~~~~~~~gf~P~~l~ 82 (395)
T PF08596_consen 3 SVTHVSFAPETLELAVGLESGEVVLFKFGKNQNYGNREQPPDLDYNFRRFSLNNSPGKLTDISDRAPPSLKEGFLPLTLL 82 (395)
T ss_dssp -EEEEEEETTTTEEEEEETTS-EEEEEEEE------------------S--GGGSS-SEEE-GGG--TT-SEEEEEEEEE
T ss_pred eEEEEEecCCCceEEEEccCCcEEEEEcccCCCCCccCCCcccCcccccccccCCCcceEEehhhCCcccccccCchhhe
Confidence 588899999988999999999999987753211 111122
Q ss_pred ccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecc--cCCCCCceeEEEEEEc-----cCC----EEEE
Q psy12614 152 DRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDK--SSKFSKNTAVWCVAFC-----ADF----TIIT 219 (708)
Q Consensus 152 ~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~--~~~~~~~~~v~~~~~~-----~~~----~l~~ 219 (708)
....++|++++.|.=| ++|.|..+ .+.|.|++....+..-.... ..+ .....++++.|. .|+ .+++
T Consensus 83 ~~~~g~vtal~~S~iG-Fvaigy~~G~l~viD~RGPavI~~~~i~~~~~~~-~~~~~vt~ieF~vm~~~~D~ySSi~L~v 160 (395)
T PF08596_consen 83 DAKQGPVTALKNSDIG-FVAIGYESGSLVVIDLRGPAVIYNENIRESFLSK-SSSSYVTSIEFSVMTLGGDGYSSICLLV 160 (395)
T ss_dssp ---S-SEEEEEE-BTS-EEEEEETTSEEEEEETTTTEEEEEEEGGG--T-S-S----EEEEEEEEEE-TTSSSEEEEEEE
T ss_pred eccCCcEeEEecCCCc-EEEEEecCCcEEEEECCCCeEEeecccccccccc-ccccCeeEEEEEEEecCCCcccceEEEE
Confidence 2346889999997444 89999998 99999998888887755443 111 235567778776 244 2789
Q ss_pred EcCCCcEEEEeCC--C-Cee----EEEeeccccCeEEEE-EeCCC--------------------CEEEEEecCCeEEEE
Q psy12614 220 GDSGGFVRFWDGK--T-GVQ----WSDVKTHKKDILALT-VSEDE--------------------NYLYCAGVDPTVVCF 271 (708)
Q Consensus 220 ~~~dg~i~~wd~~--~-~~~----~~~~~~~~~~i~~~~-~s~~~--------------------~~l~~~~~dg~i~iw 271 (708)
|+..|.+.+|.+. . +.. ......+.+.|..+. ++.+. +-++....+..++++
T Consensus 161 GTn~G~v~~fkIlp~~~g~f~v~~~~~~~~~~~~i~~I~~i~~~~G~~a~At~~~~~~l~~g~~i~g~vVvvSe~~irv~ 240 (395)
T PF08596_consen 161 GTNSGNVLTFKILPSSNGRFSVQFAGATTNHDSPILSIIPINADTGESALATISAMQGLSKGISIPGYVVVVSESDIRVF 240 (395)
T ss_dssp EETTSEEEEEEEEE-GGG-EEEEEEEEE--SS----EEEEEETTT--B-B-BHHHHHGGGGT----EEEEEE-SSEEEEE
T ss_pred EeCCCCEEEEEEecCCCCceEEEEeeccccCCCceEEEEEEECCCCCcccCchhHhhccccCCCcCcEEEEEcccceEEE
Confidence 9999999999764 1 211 112223556666555 32221 123444456789999
Q ss_pred EccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEE------e-CCEEEEEcCCCeEEEEeCCCCc-eeecCccC--
Q psy12614 272 QRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLAL------H-GNRLYSGGLDSYLSLSYYPPKT-LVKYPCTL-- 341 (708)
Q Consensus 272 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~------~-~~~l~s~~~d~~i~iw~~~~~~-~~~~~~~~-- 341 (708)
...+ .+ .........-....+++ . +..|++-..+|.++++.+..-. +.....+.
T Consensus 241 ~~~~--------~k--------~~~K~~~~~~~~~~~~vv~~~~~~~~~~Lv~l~~~G~i~i~SLP~Lkei~~~~l~~~~ 304 (395)
T PF08596_consen 241 KPPK--------SK--------GAHKSFDDPFLCSSASVVPTISRNGGYCLVCLFNNGSIRIYSLPSLKEIKSVSLPPPL 304 (395)
T ss_dssp -TT-------------------EEEEE-SS-EEEEEEEEEEEE-EEEEEEEEEEETTSEEEEEETTT--EEEEEE-SS--
T ss_pred eCCC--------Cc--------ccceeeccccccceEEEEeecccCCceEEEEEECCCcEEEEECCCchHhhcccCCCcc
Confidence 9887 43 11111111111222222 2 6778888999999999998754 32332111
Q ss_pred --CCCceEEEEcCCcEEEEEcCCeEEEEEecC
Q psy12614 342 --AQSTPVSLAKDIQHVLLQYTSHLELWSLGS 371 (708)
Q Consensus 342 --~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~ 371 (708)
.......++++|..++......+.++.+-.
T Consensus 305 d~~~~~~ssis~~Gdi~~~~gpsE~~l~sv~~ 336 (395)
T PF08596_consen 305 DSRRLSSSSISRNGDIFYWTGPSEIQLFSVWG 336 (395)
T ss_dssp -HHHHTT-EE-TTS-EEEE-SSSEEEEEEEES
T ss_pred ccccccccEECCCCCEEEEeCcccEEEEEEEc
Confidence 122467889999988887777777666544
|
The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A. |
| >COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=97.96 E-value=0.00045 Score=69.51 Aligned_cols=191 Identities=15% Similarity=0.154 Sum_probs=120.8
Q ss_pred CccceeeeeeeeccCCCCcEEEEEEcCCCCEEEEE---eCC-CcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCE
Q psy12614 10 TMGTYGVHNIKFYAPEPKVINCIACEPKSSRLAVS---RAD-QSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDR 83 (708)
Q Consensus 10 ~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~la~~---~~d-g~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~ 83 (708)
.+.+++....+.+..-...+..-+|+|+++.++.. ... ..+.++|+.+++... .+. .. +.-..-+|+ |++
T Consensus 176 ~~~D~dg~~~~~l~~~~~~~~~p~ws~~~~~~~y~~f~~~~~~~i~~~~l~~g~~~~-i~~-~~--g~~~~P~fspDG~~ 251 (425)
T COG0823 176 ALGDYDGYNQQKLTDSGSLILTPAWSPDGKKLAYVSFELGGCPRIYYLDLNTGKRPV-ILN-FN--GNNGAPAFSPDGSK 251 (425)
T ss_pred EEEccCCcceeEecccCcceeccccCcCCCceEEEEEecCCCceEEEEeccCCccce-eec-cC--CccCCccCCCCCCE
Confidence 33444455555666667778888999999887764 222 359999999877543 332 11 444566777 666
Q ss_pred EE-EEcCCCc--EEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeC-CC--cEEEEEccCCcEEEEEeccccccc
Q psy12614 84 LF-SGGLQGF--VNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTE-QG--HINLFQISDEGLLYEKLLDRQQGR 157 (708)
Q Consensus 84 l~-s~~~d~~--i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~-d~--~i~iwd~~~~~~~~~~~~~~~~~~ 157 (708)
|+ +...||. |.+.|+.++...+ +..-.+.-..-.|+|||++++..++ .| .|.+.+.+.+... ..++. .+.
T Consensus 252 l~f~~~rdg~~~iy~~dl~~~~~~~-Lt~~~gi~~~Ps~spdG~~ivf~Sdr~G~p~I~~~~~~g~~~~-riT~~--~~~ 327 (425)
T COG0823 252 LAFSSSRDGSPDIYLMDLDGKNLPR-LTNGFGINTSPSWSPDGSKIVFTSDRGGRPQIYLYDLEGSQVT-RLTFS--GGG 327 (425)
T ss_pred EEEEECCCCCccEEEEcCCCCccee-cccCCccccCccCCCCCCEEEEEeCCCCCcceEEECCCCCcee-Eeecc--CCC
Confidence 65 5556665 5556777766333 4444444447789999999988765 33 4677777776653 12222 222
Q ss_pred EEEEEECCCCCEEEEecC--C--eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE
Q psy12614 158 ILCTAWHSSGDYLVTGCA--A--AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT 216 (708)
Q Consensus 158 v~~~~~s~d~~~l~~~~~--d--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 216 (708)
-..-.|+|||++|+..+. . .|.+.|+.++..++.+.. ......-.+.++++
T Consensus 328 ~~~p~~SpdG~~i~~~~~~~g~~~i~~~~~~~~~~~~~lt~--------~~~~e~ps~~~ng~ 382 (425)
T COG0823 328 NSNPVWSPDGDKIVFESSSGGQWDIDKNDLASGGKIRILTS--------TYLNESPSWAPNGR 382 (425)
T ss_pred CcCccCCCCCCEEEEEeccCCceeeEEeccCCCCcEEEccc--------cccCCCCCcCCCCc
Confidence 237889999999998773 2 477777777665444432 23334556777775
|
|
| >COG3386 Gluconolactonase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.96 E-value=0.0062 Score=58.32 Aligned_cols=225 Identities=17% Similarity=0.106 Sum_probs=132.0
Q ss_pred EEEecCCCEEE-EEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCCeEEEEEcCCCceEEEEEec
Q psy12614 117 LSVHKKKRLLA-AGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAAAVRVWDIHKGHAIHKMSLD 195 (708)
Q Consensus 117 ~~~s~~~~~la-~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~i~iwd~~~~~~~~~~~~~ 195 (708)
..|.++...|+ +--..+.|.-|+..+++.. .+.. .+.+.++..-.++..|+++. ..+.+++.+++..+..+...
T Consensus 30 P~w~~~~~~L~w~DI~~~~i~r~~~~~g~~~---~~~~-p~~~~~~~~~d~~g~Lv~~~-~g~~~~~~~~~~~~t~~~~~ 104 (307)
T COG3386 30 PVWDPDRGALLWVDILGGRIHRLDPETGKKR---VFPS-PGGFSSGALIDAGGRLIACE-HGVRLLDPDTGGKITLLAEP 104 (307)
T ss_pred ccCcCCCCEEEEEeCCCCeEEEecCCcCceE---EEEC-CCCcccceeecCCCeEEEEc-cccEEEeccCCceeEEeccc
Confidence 34667776444 4445788888988877653 3322 23334444433444444443 35666776666664333332
Q ss_pred ccCCCCCceeEEEEEEccCCEEEEEcCC------------CcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEe
Q psy12614 196 KSSKFSKNTAVWCVAFCADFTIITGDSG------------GFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAG 263 (708)
Q Consensus 196 ~~~~~~~~~~v~~~~~~~~~~l~~~~~d------------g~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~ 263 (708)
... ......+.....|+|.+..++.. |.|+.+|. .+..++.+..+-..-+.++||||++.|+.+.
T Consensus 105 ~~~--~~~~r~ND~~v~pdG~~wfgt~~~~~~~~~~~~~~G~lyr~~p-~g~~~~l~~~~~~~~NGla~SpDg~tly~aD 181 (307)
T COG3386 105 EDG--LPLNRPNDGVVDPDGRIWFGDMGYFDLGKSEERPTGSLYRVDP-DGGVVRLLDDDLTIPNGLAFSPDGKTLYVAD 181 (307)
T ss_pred cCC--CCcCCCCceeEcCCCCEEEeCCCccccCccccCCcceEEEEcC-CCCEEEeecCcEEecCceEECCCCCEEEEEe
Confidence 211 11355667888899987766555 33555554 4666666665556668899999999888877
Q ss_pred cC-CeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEEEcCCC-eEEEEeCCCCceeecCc
Q psy12614 264 VD-PTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSGGLDS-YLSLSYYPPKTLVKYPC 339 (708)
Q Consensus 264 ~d-g~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~~~d~-~i~iw~~~~~~~~~~~~ 339 (708)
.. +.|.-|++.. . .+..... ..........+..-.++.. |.+.+++..+| .|.+|+.+...+..+.-
T Consensus 182 T~~~~i~r~~~d~-~-----~g~~~~~---~~~~~~~~~~G~PDG~~vDadG~lw~~a~~~g~~v~~~~pdG~l~~~i~l 252 (307)
T COG3386 182 TPANRIHRYDLDP-A-----TGPIGGR---RGFVDFDEEPGLPDGMAVDADGNLWVAAVWGGGRVVRFNPDGKLLGEIKL 252 (307)
T ss_pred CCCCeEEEEecCc-c-----cCccCCc---ceEEEccCCCCCCCceEEeCCCCEEEecccCCceEEEECCCCcEEEEEEC
Confidence 64 7788887762 0 0110000 1122233345566677777 55554444444 99999999777777765
Q ss_pred cCCCCceEEEE-cCCcEEEE
Q psy12614 340 TLAQSTPVSLA-KDIQHVLL 358 (708)
Q Consensus 340 ~~~~~~~~~~s-~~~~~l~~ 358 (708)
|.....+++|- ++.+.|.+
T Consensus 253 P~~~~t~~~FgG~~~~~L~i 272 (307)
T COG3386 253 PVKRPTNPAFGGPDLNTLYI 272 (307)
T ss_pred CCCCCccceEeCCCcCEEEE
Confidence 55666667665 44444443
|
|
| >KOG1008|consensus | Back alignment and domain information |
|---|
Probab=97.94 E-value=2.9e-06 Score=83.92 Aligned_cols=199 Identities=16% Similarity=0.248 Sum_probs=133.7
Q ss_pred CCcEEEEEEcCC--CCEEEEEeCCCcEEEEeCCCCCeE-EEEEecCCCCCcEEEEEEe---CCEEEEEc----CCCcEEE
Q psy12614 26 PKVINCIACEPK--SSRLAVSRADQSIEIWDISETPHV-DRVFIGDPLSNSIECLTWF---NDRLFSGG----LQGFVNE 95 (708)
Q Consensus 26 ~~~v~~~~~s~~--~~~la~~~~dg~v~iwd~~~~~~~-~~~~~~h~~~~~v~~l~~~---~~~l~s~~----~d~~i~v 95 (708)
...+.|++..-+ ...+++|..+|.|.+-........ ....++|. ...++++|+ .+.||.|- .|..+.|
T Consensus 56 tqy~kcva~~y~~d~cIlavG~atG~I~l~s~r~~hdSs~E~tp~~a--r~Ct~lAwneLDtn~LAagldkhrnds~~~I 133 (783)
T KOG1008|consen 56 TQYVKCVASFYGNDRCILAVGSATGNISLLSVRHPHDSSAEVTPGYA--RPCTSLAWNELDTNHLAAGLDKHRNDSSLKI 133 (783)
T ss_pred CCCceeehhhcCCchhhhhhccccCceEEeecCCcccccceeccccc--ccccccccccccHHHHHhhhhhhcccCCccc
Confidence 355778877654 457899999999999888764332 23667777 999999999 46777763 4678999
Q ss_pred EECCCC--eEeEE--Eee-cCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECC-CCCE
Q psy12614 96 YDMRRL--NIKSS--TAV-TSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHS-SGDY 169 (708)
Q Consensus 96 wd~~~~--~~~~~--~~~-~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~-d~~~ 169 (708)
||+.++ .+... +.+ ......+++|-.+.+++.+|.....+.++|++...... ..+ ....+..+...| .+.|
T Consensus 134 wdi~s~ltvPke~~~fs~~~l~gqns~cwlrd~klvlaGm~sr~~~ifdlRqs~~~~-~sv--nTk~vqG~tVdp~~~nY 210 (783)
T KOG1008|consen 134 WDINSLLTVPKESPLFSSSTLDGQNSVCWLRDTKLVLAGMTSRSVHIFDLRQSLDSV-SSV--NTKYVQGITVDPFSPNY 210 (783)
T ss_pred eecccccCCCccccccccccccCccccccccCcchhhcccccchhhhhhhhhhhhhh-hhh--hhhhcccceecCCCCCc
Confidence 999987 33222 222 33455688888888999999888899999987332210 111 233566777788 7888
Q ss_pred EEEecCCeEEEEE-cCCCc-eEEEEEecccCCCCCceeEEEEEEccCC--EEEEEcC-CCcEEEEeCC
Q psy12614 170 LVTGCAAAVRVWD-IHKGH-AIHKMSLDKSSKFSKNTAVWCVAFCADF--TIITGDS-GGFVRFWDGK 232 (708)
Q Consensus 170 l~~~~~d~i~iwd-~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~l~~~~~-dg~i~~wd~~ 232 (708)
+++-..+.|.+|| ..+-+ .+..+...... ....+..++|.|-. .+++... .++|+.+|+.
T Consensus 211 ~cs~~dg~iAiwD~~rnienpl~~i~~~~N~---~~~~l~~~aycPtrtglla~l~RdS~tIrlydi~ 275 (783)
T KOG1008|consen 211 FCSNSDGDIAIWDTYRNIENPLQIILRNENK---KPKQLFALAYCPTRTGLLAVLSRDSITIRLYDIC 275 (783)
T ss_pred eeccccCceeeccchhhhccHHHHHhhCCCC---cccceeeEEeccCCcchhhhhccCcceEEEeccc
Confidence 9888855999999 33322 22222221111 13458899999954 5665554 4789999875
|
|
| >COG3204 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=97.94 E-value=0.0043 Score=56.56 Aligned_cols=207 Identities=12% Similarity=0.092 Sum_probs=135.4
Q ss_pred EecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEEEEcC-CCcE
Q psy12614 149 KLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDS-GGFV 226 (708)
Q Consensus 149 ~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~-dg~i 226 (708)
+.+.+....+.++.|+|+.+.|++.... .-.+|=-..|..++++.... -.....+.+..+|+++.+.. ++.+
T Consensus 79 kpi~g~~~nvS~LTynp~~rtLFav~n~p~~iVElt~~GdlirtiPL~g------~~DpE~Ieyig~n~fvi~dER~~~l 152 (316)
T COG3204 79 KPILGETANVSSLTYNPDTRTLFAVTNKPAAIVELTKEGDLIRTIPLTG------FSDPETIEYIGGNQFVIVDERDRAL 152 (316)
T ss_pred cccccccccccceeeCCCcceEEEecCCCceEEEEecCCceEEEecccc------cCChhHeEEecCCEEEEEehhcceE
Confidence 3345556669999999999999888877 66666667899999998753 34456788888888665554 6778
Q ss_pred EEEeCCCCeeEEE----------eeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeE
Q psy12614 227 RFWDGKTGVQWSD----------VKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSV 296 (708)
Q Consensus 227 ~~wd~~~~~~~~~----------~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~ 296 (708)
.++.+..+..+.. ....+.....++|+|....|+.+-+..-+.||.....+......- .-.+..
T Consensus 153 ~~~~vd~~t~~~~~~~~~i~L~~~~k~N~GfEGlA~d~~~~~l~~aKEr~P~~I~~~~~~~~~l~~~~------~~~~~~ 226 (316)
T COG3204 153 YLFTVDADTTVISAKVQKIPLGTTNKKNKGFEGLAWDPVDHRLFVAKERNPIGIFEVTQSPSSLSVHA------SLDPTA 226 (316)
T ss_pred EEEEEcCCccEEeccceEEeccccCCCCcCceeeecCCCCceEEEEEccCCcEEEEEecCCccccccc------ccCccc
Confidence 7777655422211 122256778999999999999998888888887775111000000 000011
Q ss_pred EEeccccceEEEEEe---CCEEEEEcCCCeEEEEeCCCCc---------eeecCccCCCCceEEEEcCCcEEEEEcCCeE
Q psy12614 297 NRVIHEGDVKSLALH---GNRLYSGGLDSYLSLSYYPPKT---------LVKYPCTLAQSTPVSLAKDIQHVLLQYTSHL 364 (708)
Q Consensus 297 ~~~~~~~~v~~l~~~---~~~l~s~~~d~~i~iw~~~~~~---------~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i 364 (708)
...-.-..|.++.|+ +.+|+-+..++.+.-.|..... ...+....++...+++.++|.+-+++..+-.
T Consensus 227 ~~~~f~~DvSgl~~~~~~~~LLVLS~ESr~l~Evd~~G~~~~~lsL~~g~~gL~~dipqaEGiamDd~g~lYIvSEPnlf 306 (316)
T COG3204 227 DRDLFVLDVSGLEFNAITNSLLVLSDESRRLLEVDLSGEVIELLSLTKGNHGLSSDIPQAEGIAMDDDGNLYIVSEPNLF 306 (316)
T ss_pred ccceEeeccccceecCCCCcEEEEecCCceEEEEecCCCeeeeEEeccCCCCCcccCCCcceeEECCCCCEEEEecCCcc
Confidence 111123456777787 7778888888888877777664 2222334556678888888888777766555
Q ss_pred EEE
Q psy12614 365 ELW 367 (708)
Q Consensus 365 ~i~ 367 (708)
+.+
T Consensus 307 y~F 309 (316)
T COG3204 307 YRF 309 (316)
T ss_pred eec
Confidence 444
|
|
| >PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex | Back alignment and domain information |
|---|
Probab=97.94 E-value=0.022 Score=57.74 Aligned_cols=222 Identities=14% Similarity=0.118 Sum_probs=119.9
Q ss_pred EEEEcCCCCEEEEEeCC----------C-cEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe-CCEEEEEcCCCcEEEEEC
Q psy12614 31 CIACEPKSSRLAVSRAD----------Q-SIEIWDISETPHVDRVFIGDPLSNSIECLTWF-NDRLFSGGLQGFVNEYDM 98 (708)
Q Consensus 31 ~~~~s~~~~~la~~~~d----------g-~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~-~~~l~s~~~d~~i~vwd~ 98 (708)
.++.+|.|..+|....+ . .|.||+.... .+. .+.-.. +.|.++.|+ ...|+....||.++++|+
T Consensus 33 ~va~a~~gGpIAi~~d~~k~~~~~~~~p~~I~iys~sG~-ll~-~i~w~~--~~iv~~~wt~~e~LvvV~~dG~v~vy~~ 108 (410)
T PF04841_consen 33 IVAVAPYGGPIAIIRDESKLVPVGSAKPNSIQIYSSSGK-LLS-SIPWDS--GRIVGMGWTDDEELVVVQSDGTVRVYDL 108 (410)
T ss_pred eEEEcCCCceEEEEecCcccccccCCCCcEEEEECCCCC-EeE-EEEECC--CCEEEEEECCCCeEEEEEcCCEEEEEeC
Confidence 46778888888877544 1 4899997754 443 333333 689999999 889999999999999998
Q ss_pred CCCe------EeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEE----------EE
Q psy12614 99 RRLN------IKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILC----------TA 162 (708)
Q Consensus 99 ~~~~------~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~----------~~ 162 (708)
.... ...........+.+..+..+| +|.-..++.+.+.+--...... +.+..-...... ..
T Consensus 109 ~G~~~fsl~~~i~~~~v~e~~i~~~~~~~~G--ivvLt~~~~~~~v~n~~~~~~~-~~~~~~p~~~~~~~~~~~~~~i~~ 185 (410)
T PF04841_consen 109 FGEFQFSLGEEIEEEKVLECRIFAIWFYKNG--IVVLTGNNRFYVVNNIDEPVKL-RRLPEIPGLWTKFHWWPSWTVIPL 185 (410)
T ss_pred CCceeechhhhccccCcccccccccccCCCC--EEEECCCCeEEEEeCccccchh-hccccCCCcccccccccccccceE
Confidence 7433 111111122223333444455 3333445555444322221110 111100000000 22
Q ss_pred ECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCeeEEEe
Q psy12614 163 WHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDV 240 (708)
Q Consensus 163 ~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~ 240 (708)
++.+....+....+ .+.+.+-..... + ...+++..++.||+|+ ++.-..+|.+.+.+..-.+.+..+
T Consensus 186 l~~~~~~~i~~~~g~~i~~i~~~~~~~---i--------~~~~~i~~iavSpng~~iAl~t~~g~l~v~ssDf~~~~~e~ 254 (410)
T PF04841_consen 186 LSSDRVVEILLANGETIYIIDENSFKQ---I--------DSDGPIIKIAVSPNGKFIALFTDSGNLWVVSSDFSEKLCEF 254 (410)
T ss_pred eecCcceEEEEecCCEEEEEEcccccc---c--------cCCCCeEEEEECCCCCEEEEEECCCCEEEEECcccceeEEe
Confidence 33333333333333 444333221111 1 1146799999999997 667777899999987655555555
Q ss_pred ecc-ccCeEEEEEeCCCCEEEEEecCCeEEEEE
Q psy12614 241 KTH-KKDILALTVSEDENYLYCAGVDPTVVCFQ 272 (708)
Q Consensus 241 ~~~-~~~i~~~~~s~~~~~l~~~~~dg~i~iw~ 272 (708)
... ......+.|+-+...++.- ...+.+..
T Consensus 255 ~~~~~~~p~~~~WCG~dav~l~~--~~~l~lvg 285 (410)
T PF04841_consen 255 DTDSKSPPKQMAWCGNDAVVLSW--EDELLLVG 285 (410)
T ss_pred ecCcCCCCcEEEEECCCcEEEEe--CCEEEEEC
Confidence 433 3455677777665333322 33444444
|
Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm |
| >KOG1008|consensus | Back alignment and domain information |
|---|
Probab=97.94 E-value=4.3e-06 Score=82.77 Aligned_cols=195 Identities=15% Similarity=0.242 Sum_probs=127.9
Q ss_pred CcEEEEEEe----CCEEEEEcCCCcEEEEECCCCeE--eEEEeecCCceEEEEEec-CCCEEEEEeC----CCcEEEEEc
Q psy12614 72 NSIECLTWF----NDRLFSGGLQGFVNEYDMRRLNI--KSSTAVTSGTCWCLSVHK-KKRLLAAGTE----QGHINLFQI 140 (708)
Q Consensus 72 ~~v~~l~~~----~~~l~s~~~d~~i~vwd~~~~~~--~~~~~~~~~~v~~~~~s~-~~~~la~~~~----d~~i~iwd~ 140 (708)
..+.|+++. ...+++|..+|.|.+-.+....- .....++....++++|++ |.+.||+|-. |..+.|||+
T Consensus 57 qy~kcva~~y~~d~cIlavG~atG~I~l~s~r~~hdSs~E~tp~~ar~Ct~lAwneLDtn~LAagldkhrnds~~~Iwdi 136 (783)
T KOG1008|consen 57 QYVKCVASFYGNDRCILAVGSATGNISLLSVRHPHDSSAEVTPGYARPCTSLAWNELDTNHLAAGLDKHRNDSSLKIWDI 136 (783)
T ss_pred CCceeehhhcCCchhhhhhccccCceEEeecCCcccccceecccccccccccccccccHHHHHhhhhhhcccCCccceec
Confidence 456677776 24678888999999887665332 234557788999999998 5667887743 677999999
Q ss_pred cCCc--EEEEEeccc-ccccEEEEEECCCCCEEEEecCC-eEEEEEcCCC-ceEEEEEecccCCCCCceeEEEEEEcc-C
Q psy12614 141 SDEG--LLYEKLLDR-QQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKG-HAIHKMSLDKSSKFSKNTAVWCVAFCA-D 214 (708)
Q Consensus 141 ~~~~--~~~~~~~~~-~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~~-~ 214 (708)
.++- ......+.+ ......+++|-.+.+.+.+|... .+.++|++.. .....+. ...+..+...| .
T Consensus 137 ~s~ltvPke~~~fs~~~l~gqns~cwlrd~klvlaGm~sr~~~ifdlRqs~~~~~svn---------Tk~vqG~tVdp~~ 207 (783)
T KOG1008|consen 137 NSLLTVPKESPLFSSSTLDGQNSVCWLRDTKLVLAGMTSRSVHIFDLRQSLDSVSSVN---------TKYVQGITVDPFS 207 (783)
T ss_pred ccccCCCccccccccccccCccccccccCcchhhcccccchhhhhhhhhhhhhhhhhh---------hhhcccceecCCC
Confidence 8762 211112222 33455689999888888888888 9999998732 2222221 34566777777 4
Q ss_pred CEEEEEcCCCcEEEEeC-CCC-eeEEEeec----cccCeEEEEEeCCCC-EEEEEec-CCeEEEEEccC
Q psy12614 215 FTIITGDSGGFVRFWDG-KTG-VQWSDVKT----HKKDILALTVSEDEN-YLYCAGV-DPTVVCFQRTR 275 (708)
Q Consensus 215 ~~l~~~~~dg~i~~wd~-~~~-~~~~~~~~----~~~~i~~~~~s~~~~-~l~~~~~-dg~i~iw~~~~ 275 (708)
+..++...||.|.+||. ..- .++..+.. ....+..++|+|-.+ .+++... .++|+++++..
T Consensus 208 ~nY~cs~~dg~iAiwD~~rnienpl~~i~~~~N~~~~~l~~~aycPtrtglla~l~RdS~tIrlydi~~ 276 (783)
T KOG1008|consen 208 PNYFCSNSDGDIAIWDTYRNIENPLQIILRNENKKPKQLFALAYCPTRTGLLAVLSRDSITIRLYDICV 276 (783)
T ss_pred CCceeccccCceeeccchhhhccHHHHHhhCCCCcccceeeEEeccCCcchhhhhccCcceEEEecccc
Confidence 45677777999999993 222 12222221 123488999999542 3444444 47899999875
|
|
| >PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A | Back alignment and domain information |
|---|
Probab=97.93 E-value=0.021 Score=54.30 Aligned_cols=275 Identities=15% Similarity=0.194 Sum_probs=133.5
Q ss_pred CCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEE-EEEecCC-CCCcEEEEEEeCCEEEEEcCCCcEEEEECCCCe
Q psy12614 25 EPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVD-RVFIGDP-LSNSIECLTWFNDRLFSGGLQGFVNEYDMRRLN 102 (708)
Q Consensus 25 h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~-~~~~~h~-~~~~v~~l~~~~~~l~s~~~d~~i~vwd~~~~~ 102 (708)
-...+..|+|..+..-.|+|. .|.| +--.+.|+.=. ....... ..-...+|.|.++....++..+. .+--.+.|+
T Consensus 15 t~~~l~dV~F~d~~~G~~VG~-~g~i-l~T~DGG~tW~~~~~~~~~~~~~~l~~I~f~~~~g~ivG~~g~-ll~T~DgG~ 91 (302)
T PF14870_consen 15 TDKPLLDVAFVDPNHGWAVGA-YGTI-LKTTDGGKTWQPVSLDLDNPFDYHLNSISFDGNEGWIVGEPGL-LLHTTDGGK 91 (302)
T ss_dssp -SS-EEEEEESSSS-EEEEET-TTEE-EEESSTTSS-EE-----S-----EEEEEEEETTEEEEEEETTE-EEEESSTTS
T ss_pred CCCceEEEEEecCCEEEEEec-CCEE-EEECCCCccccccccCCCccceeeEEEEEecCCceEEEcCCce-EEEecCCCC
Confidence 456899999996666677765 4433 22223332111 1111111 01346778888444444555553 333444444
Q ss_pred EeEEEe---ecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eE
Q psy12614 103 IKSSTA---VTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AV 178 (708)
Q Consensus 103 ~~~~~~---~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i 178 (708)
.=..+. .-.+....+....++..++ ++..|. ||....+-...........+.+..+.-++||++++++... ..
T Consensus 92 tW~~v~l~~~lpgs~~~i~~l~~~~~~l-~~~~G~--iy~T~DgG~tW~~~~~~~~gs~~~~~r~~dG~~vavs~~G~~~ 168 (302)
T PF14870_consen 92 TWERVPLSSKLPGSPFGITALGDGSAEL-AGDRGA--IYRTTDGGKTWQAVVSETSGSINDITRSSDGRYVAVSSRGNFY 168 (302)
T ss_dssp S-EE----TT-SS-EEEEEEEETTEEEE-EETT----EEEESSTTSSEEEEE-S----EEEEEE-TTS-EEEEETTSSEE
T ss_pred CcEEeecCCCCCCCeeEEEEcCCCcEEE-EcCCCc--EEEeCCCCCCeeEcccCCcceeEeEEECCCCcEEEEECcccEE
Confidence 322221 1123334444444443333 344554 4444433222224445556789999999999999999988 77
Q ss_pred EEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEEEEcCCCcEEEEeC-CCCeeEEE----eeccccCeEEEEEe
Q psy12614 179 RVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDG-KTGVQWSD----VKTHKKDILALTVS 253 (708)
Q Consensus 179 ~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~wd~-~~~~~~~~----~~~~~~~i~~~~~s 253 (708)
.-||.-.. .-...... ....|..|.|.|++.+......|.|++=+. ...+.... +....-.+..++|.
T Consensus 169 ~s~~~G~~-~w~~~~r~------~~~riq~~gf~~~~~lw~~~~Gg~~~~s~~~~~~~~w~~~~~~~~~~~~~~ld~a~~ 241 (302)
T PF14870_consen 169 SSWDPGQT-TWQPHNRN------SSRRIQSMGFSPDGNLWMLARGGQIQFSDDPDDGETWSEPIIPIKTNGYGILDLAYR 241 (302)
T ss_dssp EEE-TT-S-S-EEEE--------SSS-EEEEEE-TTS-EEEEETTTEEEEEE-TTEEEEE---B-TTSS--S-EEEEEES
T ss_pred EEecCCCc-cceEEccC------ccceehhceecCCCCEEEEeCCcEEEEccCCCCccccccccCCcccCceeeEEEEec
Confidence 78874321 12222221 168899999999998766778899998872 22222222 11223457899999
Q ss_pred CCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe-CCEEEEEcCCCeEEEE
Q psy12614 254 EDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH-GNRLYSGGLDSYLSLS 327 (708)
Q Consensus 254 ~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~-~~~l~s~~~d~~i~iw 327 (708)
+++...++|+ .|.+ +...+. |+ .|........-...+..+.|. .+.-...+.+|.|.-|
T Consensus 242 ~~~~~wa~gg-~G~l-~~S~Dg--------Gk-----tW~~~~~~~~~~~n~~~i~f~~~~~gf~lG~~G~ll~~ 301 (302)
T PF14870_consen 242 PPNEIWAVGG-SGTL-LVSTDG--------GK-----TWQKDRVGENVPSNLYRIVFVNPDKGFVLGQDGVLLRY 301 (302)
T ss_dssp SSS-EEEEES-TT-E-EEESST--------TS-----S-EE-GGGTTSSS---EEEEEETTEEEEE-STTEEEEE
T ss_pred CCCCEEEEeC-CccE-EEeCCC--------Cc-----cceECccccCCCCceEEEEEcCCCceEEECCCcEEEEe
Confidence 9887777665 4433 334444 43 565444444445668888887 6677777788877654
|
|
| >PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins | Back alignment and domain information |
|---|
Probab=97.90 E-value=0.00059 Score=72.69 Aligned_cols=134 Identities=13% Similarity=0.215 Sum_probs=93.5
Q ss_pred CCCcEEEEEccCCcEEEEEecccccc-cEEEEEECCCC-------CEEEEecCC-eEEEEEcCCCc--eEEEEEecccCC
Q psy12614 131 EQGHINLFQISDEGLLYEKLLDRQQG-RILCTAWHSSG-------DYLVTGCAA-AVRVWDIHKGH--AIHKMSLDKSSK 199 (708)
Q Consensus 131 ~d~~i~iwd~~~~~~~~~~~~~~~~~-~v~~~~~s~d~-------~~l~~~~~d-~i~iwd~~~~~--~~~~~~~~~~~~ 199 (708)
....|+-.|++.|+++ .....+.. +|..++ |+. ...+.|-.+ .+..||.+-.. .+..- ...
T Consensus 502 ~~~~ly~mDLe~GKVV--~eW~~~~~~~v~~~~--p~~K~aqlt~e~tflGls~n~lfriDpR~~~~k~v~~~----~k~ 573 (794)
T PF08553_consen 502 NPNKLYKMDLERGKVV--EEWKVHDDIPVVDIA--PDSKFAQLTNEQTFLGLSDNSLFRIDPRLSGNKLVDSQ----SKQ 573 (794)
T ss_pred CCCceEEEecCCCcEE--EEeecCCCcceeEec--ccccccccCCCceEEEECCCceEEeccCCCCCceeecc----ccc
Confidence 4678999999999998 44444443 355544 432 223444444 99999988532 22111 111
Q ss_pred CCCceeEEEEEEccCCEEEEEcCCCcEEEEeCCCCee-EEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEcc
Q psy12614 200 FSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQ-WSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRT 274 (708)
Q Consensus 200 ~~~~~~v~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~-~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~ 274 (708)
|.......|++-+.+|.+|+|+.+|.|++||- .|.. ...+++...+|..+..+.||++|++.+ +..+.+++..
T Consensus 574 Y~~~~~Fs~~aTt~~G~iavgs~~G~IRLyd~-~g~~AKT~lp~lG~pI~~iDvt~DGkwilaTc-~tyLlLi~t~ 647 (794)
T PF08553_consen 574 YSSKNNFSCFATTEDGYIAVGSNKGDIRLYDR-LGKRAKTALPGLGDPIIGIDVTADGKWILATC-KTYLLLIDTL 647 (794)
T ss_pred cccCCCceEEEecCCceEEEEeCCCcEEeecc-cchhhhhcCCCCCCCeeEEEecCCCcEEEEee-cceEEEEEEe
Confidence 23366788999999999999999999999994 4433 344677789999999999999998776 4577777754
|
Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ]. |
| >PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=97.88 E-value=0.023 Score=58.50 Aligned_cols=239 Identities=13% Similarity=0.186 Sum_probs=133.1
Q ss_pred cEEEEEEcCCCCEEEEE-eCCC----cEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcC-----------
Q psy12614 28 VINCIACEPKSSRLAVS-RADQ----SIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGL----------- 89 (708)
Q Consensus 28 ~v~~~~~s~~~~~la~~-~~dg----~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~----------- 89 (708)
.+..+++||||++||.+ +..| .|++.|+.+++.+...+.... -..+.|. ++.++-...
T Consensus 125 ~~~~~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg~~l~d~i~~~~----~~~~~W~~d~~~~~y~~~~~~~~~~~~~~ 200 (414)
T PF02897_consen 125 SLGGFSVSPDGKRLAYSLSDGGSEWYTLRVFDLETGKFLPDGIENPK----FSSVSWSDDGKGFFYTRFDEDQRTSDSGY 200 (414)
T ss_dssp EEEEEEETTTSSEEEEEEEETTSSEEEEEEEETTTTEEEEEEEEEEE----SEEEEECTTSSEEEEEECSTTTSS-CCGC
T ss_pred EeeeeeECCCCCEEEEEecCCCCceEEEEEEECCCCcCcCCcccccc----cceEEEeCCCCEEEEEEeCcccccccCCC
Confidence 44568899999999976 3344 499999999987764544332 2238998 556554432
Q ss_pred CCcEEEEECCCCeEe--EEEeecCCc--eEEEEEecCCCEEEEEeC---C-CcEEEEEccCC---cEEEEEecccccccE
Q psy12614 90 QGFVNEYDMRRLNIK--SSTAVTSGT--CWCLSVHKKKRLLAAGTE---Q-GHINLFQISDE---GLLYEKLLDRQQGRI 158 (708)
Q Consensus 90 d~~i~vwd~~~~~~~--~~~~~~~~~--v~~~~~s~~~~~la~~~~---d-~~i~iwd~~~~---~~~~~~~~~~~~~~v 158 (708)
...|..|.+.+.... ..+...... ...+..++|+++|+.... + ..+++.+...+ ............+..
T Consensus 201 ~~~v~~~~~gt~~~~d~lvfe~~~~~~~~~~~~~s~d~~~l~i~~~~~~~~s~v~~~d~~~~~~~~~~~~~l~~~~~~~~ 280 (414)
T PF02897_consen 201 PRQVYRHKLGTPQSEDELVFEEPDEPFWFVSVSRSKDGRYLFISSSSGTSESEVYLLDLDDGGSPDAKPKLLSPREDGVE 280 (414)
T ss_dssp CEEEEEEETTS-GGG-EEEEC-TTCTTSEEEEEE-TTSSEEEEEEESSSSEEEEEEEECCCTTTSS-SEEEEEESSSS-E
T ss_pred CcEEEEEECCCChHhCeeEEeecCCCcEEEEEEecCcccEEEEEEEccccCCeEEEEeccccCCCcCCcEEEeCCCCceE
Confidence 234888888876432 444443333 567889999998876433 2 45888888775 111112233333333
Q ss_pred EEEEECCCCCEEEEecC---C-eEEEEEcCCCce--EEEEEecccCCCCCceeEEEEEEccCCEEEEEcCCC--cEEEEe
Q psy12614 159 LCTAWHSSGDYLVTGCA---A-AVRVWDIHKGHA--IHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGG--FVRFWD 230 (708)
Q Consensus 159 ~~~~~s~d~~~l~~~~~---d-~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg--~i~~wd 230 (708)
..+... .+.+++.... + .|...++.+... .......+ .....+..+....+..++....++ .|++++
T Consensus 281 ~~v~~~-~~~~yi~Tn~~a~~~~l~~~~l~~~~~~~~~~~l~~~----~~~~~l~~~~~~~~~Lvl~~~~~~~~~l~v~~ 355 (414)
T PF02897_consen 281 YYVDHH-GDRLYILTNDDAPNGRLVAVDLADPSPAEWWTVLIPE----DEDVSLEDVSLFKDYLVLSYRENGSSRLRVYD 355 (414)
T ss_dssp EEEEEE-TTEEEEEE-TT-TT-EEEEEETTSTSGGGEEEEEE------SSSEEEEEEEEETTEEEEEEEETTEEEEEEEE
T ss_pred EEEEcc-CCEEEEeeCCCCCCcEEEEecccccccccceeEEcCC----CCceeEEEEEEECCEEEEEEEECCccEEEEEE
Confidence 444443 4444443333 2 566677776652 22222221 123466677665554455554444 688999
Q ss_pred CCCCeeEEEeec-cccCeEEEEEeCCCCEEEEEec----CCeEEEEEccC
Q psy12614 231 GKTGVQWSDVKT-HKKDILALTVSEDENYLYCAGV----DPTVVCFQRTR 275 (708)
Q Consensus 231 ~~~~~~~~~~~~-~~~~i~~~~~s~~~~~l~~~~~----dg~i~iw~~~~ 275 (708)
+..+.....+.. ..+.|..+...++++.+...-. -+.+..||+.+
T Consensus 356 ~~~~~~~~~~~~p~~g~v~~~~~~~~~~~~~~~~ss~~~P~~~y~~d~~t 405 (414)
T PF02897_consen 356 LDDGKESREIPLPEAGSVSGVSGDFDSDELRFSYSSFTTPPTVYRYDLAT 405 (414)
T ss_dssp TT-TEEEEEEESSSSSEEEEEES-TT-SEEEEEEEETTEEEEEEEEETTT
T ss_pred CCCCcEEeeecCCcceEEeccCCCCCCCEEEEEEeCCCCCCEEEEEECCC
Confidence 883444444433 2344566665566655543222 25788888888
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A .... |
| >PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit | Back alignment and domain information |
|---|
Probab=97.85 E-value=0.037 Score=54.57 Aligned_cols=175 Identities=16% Similarity=0.184 Sum_probs=111.9
Q ss_pred CcEEEEECCCCeEeEEEeec-CCceEEEEE---ecC----CCEEEEEeC----------CCcEEEEEccCC-----cEEE
Q psy12614 91 GFVNEYDMRRLNIKSSTAVT-SGTCWCLSV---HKK----KRLLAAGTE----------QGHINLFQISDE-----GLLY 147 (708)
Q Consensus 91 ~~i~vwd~~~~~~~~~~~~~-~~~v~~~~~---s~~----~~~la~~~~----------d~~i~iwd~~~~-----~~~~ 147 (708)
+.|++.|..+.+.+..+.-. ...+.+++. ..+ ..++++|+. .|.|.++++... ++..
T Consensus 2 s~i~l~d~~~~~~~~~~~l~~~E~~~s~~~~~l~~~~~~~~~~ivVGT~~~~~~~~~~~~Gri~v~~i~~~~~~~~~l~~ 81 (321)
T PF03178_consen 2 SSIRLVDPTTFEVLDSFELEPNEHVTSLCSVKLKGDSTGKKEYIVVGTAFNYGEDPEPSSGRILVFEISESPENNFKLKL 81 (321)
T ss_dssp -EEEEEETTTSSEEEEEEEETTEEEEEEEEEEETTS---SSEEEEEEEEE--TTSSS-S-EEEEEEEECSS-----EEEE
T ss_pred cEEEEEeCCCCeEEEEEECCCCceEEEEEEEEEcCccccccCEEEEEecccccccccccCcEEEEEEEEcccccceEEEE
Confidence 46888888888777666532 334554443 332 467887754 288999999984 3332
Q ss_pred EEecccccccEEEEEECCCCCEEEEecCCeEEEEEcCCCc-eEEEEEecccCCCCCceeEEEEEEccCCEEEEEcCCCcE
Q psy12614 148 EKLLDRQQGRILCTAWHSSGDYLVTGCAAAVRVWDIHKGH-AIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFV 226 (708)
Q Consensus 148 ~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i 226 (708)
..-....++|.+++-- +.+|+.+....|.+|++...+ ....-.... ...+.++....+ .+++|+....+
T Consensus 82 -i~~~~~~g~V~ai~~~--~~~lv~~~g~~l~v~~l~~~~~l~~~~~~~~------~~~i~sl~~~~~-~I~vgD~~~sv 151 (321)
T PF03178_consen 82 -IHSTEVKGPVTAICSF--NGRLVVAVGNKLYVYDLDNSKTLLKKAFYDS------PFYITSLSVFKN-YILVGDAMKSV 151 (321)
T ss_dssp -EEEEEESS-EEEEEEE--TTEEEEEETTEEEEEEEETTSSEEEEEEE-B------SSSEEEEEEETT-EEEEEESSSSE
T ss_pred -EEEEeecCcceEhhhh--CCEEEEeecCEEEEEEccCcccchhhheecc------eEEEEEEecccc-EEEEEEcccCE
Confidence 2223347889998866 345666666688899988777 444433321 446777766533 78899988888
Q ss_pred EEEeCCC-CeeEEEe--eccccCeEEEEEeCCCCEEEEEecCCeEEEEEccC
Q psy12614 227 RFWDGKT-GVQWSDV--KTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTR 275 (708)
Q Consensus 227 ~~wd~~~-~~~~~~~--~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~ 275 (708)
.++..+. +..+..+ ......++++.|-++++.++.++.+|.+.++....
T Consensus 152 ~~~~~~~~~~~l~~va~d~~~~~v~~~~~l~d~~~~i~~D~~gnl~~l~~~~ 203 (321)
T PF03178_consen 152 SLLRYDEENNKLILVARDYQPRWVTAAEFLVDEDTIIVGDKDGNLFVLRYNP 203 (321)
T ss_dssp EEEEEETTTE-EEEEEEESS-BEEEEEEEE-SSSEEEEEETTSEEEEEEE-S
T ss_pred EEEEEEccCCEEEEEEecCCCccEEEEEEecCCcEEEEEcCCCeEEEEEECC
Confidence 8774432 3323322 22355688899987777999999999999998874
|
CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A .... |
| >PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit | Back alignment and domain information |
|---|
Probab=97.85 E-value=0.029 Score=55.31 Aligned_cols=211 Identities=15% Similarity=0.185 Sum_probs=123.7
Q ss_pred CcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe---C------CEEEEEcC----------CCcEEEEECCCC----eEe
Q psy12614 48 QSIEIWDISETPHVDRVFIGDPLSNSIECLTWF---N------DRLFSGGL----------QGFVNEYDMRRL----NIK 104 (708)
Q Consensus 48 g~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~---~------~~l~s~~~----------d~~i~vwd~~~~----~~~ 104 (708)
+.|++.|..+.+.+. .+.-.. ...+.+++.. + .++++|+. .|.|.++++... ..+
T Consensus 2 s~i~l~d~~~~~~~~-~~~l~~-~E~~~s~~~~~l~~~~~~~~~~ivVGT~~~~~~~~~~~~Gri~v~~i~~~~~~~~~l 79 (321)
T PF03178_consen 2 SSIRLVDPTTFEVLD-SFELEP-NEHVTSLCSVKLKGDSTGKKEYIVVGTAFNYGEDPEPSSGRILVFEISESPENNFKL 79 (321)
T ss_dssp -EEEEEETTTSSEEE-EEEEET-TEEEEEEEEEEETTS---SSEEEEEEEEE--TTSSS-S-EEEEEEEECSS-----EE
T ss_pred cEEEEEeCCCCeEEE-EEECCC-CceEEEEEEEEEcCccccccCEEEEEecccccccccccCcEEEEEEEEcccccceEE
Confidence 368888888877664 333222 2566666554 2 45666642 288999999984 122
Q ss_pred EE--EeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCc-EEEEEecccccccEEEEEECCCCCEEEEecCC-eEEE
Q psy12614 105 SS--TAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEG-LLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRV 180 (708)
Q Consensus 105 ~~--~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~-~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~i 180 (708)
.. -....++|++++-- ++ +|+++. .+.|.+|++...+ +....... ....+.++... +++++.|... .+.+
T Consensus 80 ~~i~~~~~~g~V~ai~~~-~~-~lv~~~-g~~l~v~~l~~~~~l~~~~~~~-~~~~i~sl~~~--~~~I~vgD~~~sv~~ 153 (321)
T PF03178_consen 80 KLIHSTEVKGPVTAICSF-NG-RLVVAV-GNKLYVYDLDNSKTLLKKAFYD-SPFYITSLSVF--KNYILVGDAMKSVSL 153 (321)
T ss_dssp EEEEEEEESS-EEEEEEE-TT-EEEEEE-TTEEEEEEEETTSSEEEEEEE--BSSSEEEEEEE--TTEEEEEESSSSEEE
T ss_pred EEEEEEeecCcceEhhhh-CC-EEEEee-cCEEEEEEccCcccchhhheec-ceEEEEEEecc--ccEEEEEEcccCEEE
Confidence 21 22457889998877 33 455443 4789999999888 65433333 33366666655 5588888766 6666
Q ss_pred EEcCC-CceEEEEEecccCCCCCceeEEEEEEccCC-EEEEEcCCCcEEEEeCCC-------Ce--eEEEee-ccccCeE
Q psy12614 181 WDIHK-GHAIHKMSLDKSSKFSKNTAVWCVAFCADF-TIITGDSGGFVRFWDGKT-------GV--QWSDVK-THKKDIL 248 (708)
Q Consensus 181 wd~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~~~~~dg~i~~wd~~~-------~~--~~~~~~-~~~~~i~ 248 (708)
+.... +..+..+... .....++++.|.+++ .+++++.+|.+.++.... +. ...... .....|+
T Consensus 154 ~~~~~~~~~l~~va~d-----~~~~~v~~~~~l~d~~~~i~~D~~gnl~~l~~~~~~~~~~~~~~~L~~~~~f~lg~~v~ 228 (321)
T PF03178_consen 154 LRYDEENNKLILVARD-----YQPRWVTAAEFLVDEDTIIVGDKDGNLFVLRYNPEIPNSRDGDPKLERISSFHLGDIVN 228 (321)
T ss_dssp EEEETTTE-EEEEEEE-----SS-BEEEEEEEE-SSSEEEEEETTSEEEEEEE-SS-SSTTTTTTBEEEEEEEE-SS-EE
T ss_pred EEEEccCCEEEEEEec-----CCCccEEEEEEecCCcEEEEEcCCCeEEEEEECCCCcccccccccceeEEEEECCCccc
Confidence 64433 3334344332 226678899898666 699999999999987652 22 222211 1345677
Q ss_pred EE---EEeC--CCC------EEEEEecCCeEEEE
Q psy12614 249 AL---TVSE--DEN------YLYCAGVDPTVVCF 271 (708)
Q Consensus 249 ~~---~~s~--~~~------~l~~~~~dg~i~iw 271 (708)
++ ++.| .+. .++.++.+|.|...
T Consensus 229 ~~~~~~l~~~~~~~~~~~~~~i~~~T~~G~Ig~l 262 (321)
T PF03178_consen 229 SFRRGSLIPRSGSSESPNRPQILYGTVDGSIGVL 262 (321)
T ss_dssp EEEE--SS--SSSS-TTEEEEEEEEETTS-EEEE
T ss_pred eEEEEEeeecCCCCcccccceEEEEecCCEEEEE
Confidence 76 4444 222 47888889988844
|
CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A .... |
| >PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase | Back alignment and domain information |
|---|
Probab=97.81 E-value=0.03 Score=53.93 Aligned_cols=223 Identities=17% Similarity=0.192 Sum_probs=129.7
Q ss_pred CCEEEEEcCCCcEEEEECC-CCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEe---------
Q psy12614 81 NDRLFSGGLQGFVNEYDMR-RLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKL--------- 150 (708)
Q Consensus 81 ~~~l~s~~~d~~i~vwd~~-~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~--------- 150 (708)
++.|+.|+.+| +.++++. .......... ..|..+...|+-+.|++-+ |+.++++++..-.......
T Consensus 7 ~~~L~vGt~~G-l~~~~~~~~~~~~~i~~~--~~I~ql~vl~~~~~llvLs-d~~l~~~~L~~l~~~~~~~~~~~~~~~~ 82 (275)
T PF00780_consen 7 GDRLLVGTEDG-LYVYDLSDPSKPTRILKL--SSITQLSVLPELNLLLVLS-DGQLYVYDLDSLEPVSTSAPLAFPKSRS 82 (275)
T ss_pred CCEEEEEECCC-EEEEEecCCccceeEeec--ceEEEEEEecccCEEEEEc-CCccEEEEchhhcccccccccccccccc
Confidence 78999999988 8999983 3333333322 3399999999888777654 5999999987544331110
Q ss_pred ---cccccccEEEEE---ECCCCCEEEEecCCeEEEEEcCCC-----ceEEEEEecccCCCCCceeEEEEEEccCCEEEE
Q psy12614 151 ---LDRQQGRILCTA---WHSSGDYLVTGCAAAVRVWDIHKG-----HAIHKMSLDKSSKFSKNTAVWCVAFCADFTIIT 219 (708)
Q Consensus 151 ---~~~~~~~v~~~~---~s~d~~~l~~~~~d~i~iwd~~~~-----~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~ 219 (708)
-......+...+ -.....+|+.+....|.+|.+... +..+++.. ...+.+++|.+ +.++.
T Consensus 83 ~~~~~~~~~~v~~f~~~~~~~~~~~L~va~kk~i~i~~~~~~~~~f~~~~ke~~l--------p~~~~~i~~~~-~~i~v 153 (275)
T PF00780_consen 83 LPTKLPETKGVSFFAVNGGHEGSRRLCVAVKKKILIYEWNDPRNSFSKLLKEISL--------PDPPSSIAFLG-NKICV 153 (275)
T ss_pred ccccccccCCeeEEeeccccccceEEEEEECCEEEEEEEECCcccccceeEEEEc--------CCCcEEEEEeC-CEEEE
Confidence 011122344443 223345566666557777776543 34555544 57788898883 34555
Q ss_pred EcCCCcEEEEeCCCCeeEEEeecc------------ccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCC
Q psy12614 220 GDSGGFVRFWDGKTGVQWSDVKTH------------KKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQ 287 (708)
Q Consensus 220 ~~~dg~i~~wd~~~~~~~~~~~~~------------~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~ 287 (708)
|.. ....+.|+.++.....+... ..++..+.. +++.+|++- |..-.+.|... +
T Consensus 154 ~~~-~~f~~idl~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~e~Ll~~--~~~g~fv~~~G---------~-- 218 (275)
T PF00780_consen 154 GTS-KGFYLIDLNTGSPSELLDPSDSSSSFKSRNSSSKPLGIFQL-SDNEFLLCY--DNIGVFVNKNG---------E-- 218 (275)
T ss_pred EeC-CceEEEecCCCCceEEeCccCCcchhhhcccCCCceEEEEe-CCceEEEEe--cceEEEEcCCC---------C--
Confidence 554 45888898877654433211 122333333 345566543 33444444443 2
Q ss_pred CCcceEEeEEEeccccceEEEEEeCCEEEEEcCCCeEEEEeCCCCceeec
Q psy12614 288 GSSVWVRSVNRVIHEGDVKSLALHGNRLYSGGLDSYLSLSYYPPKTLVKY 337 (708)
Q Consensus 288 ~~~~~~~~~~~~~~~~~v~~l~~~~~~l~s~~~d~~i~iw~~~~~~~~~~ 337 (708)
.. ....+.. .....++++...+|+..+.+ .|.+|++.++.+.+.
T Consensus 219 -~~---r~~~i~W-~~~p~~~~~~~pyli~~~~~-~iEV~~~~~~~lvQ~ 262 (275)
T PF00780_consen 219 -PS---RKSTIQW-SSAPQSVAYSSPYLIAFSSN-SIEVRSLETGELVQT 262 (275)
T ss_pred -cC---cccEEEc-CCchhEEEEECCEEEEECCC-EEEEEECcCCcEEEE
Confidence 00 0112222 23566778887888887764 499999998875443
|
These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity |
| >TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family | Back alignment and domain information |
|---|
Probab=97.80 E-value=0.068 Score=56.23 Aligned_cols=193 Identities=14% Similarity=0.134 Sum_probs=111.6
Q ss_pred CCEEEEEeCCCcEEEEEccCCcEEEEEecccccc--cE-------EEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEE
Q psy12614 123 KRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQG--RI-------LCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKM 192 (708)
Q Consensus 123 ~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~--~v-------~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~ 192 (708)
+..|++++.++.|.-+|..+|+.+.......... .. ..+++. +..++.++.+ .+.-.|.++|+.+.+.
T Consensus 69 ~g~vyv~s~~g~v~AlDa~TGk~lW~~~~~~~~~~~~~~~~~~~~rg~av~--~~~v~v~t~dg~l~ALDa~TGk~~W~~ 146 (527)
T TIGR03075 69 DGVMYVTTSYSRVYALDAKTGKELWKYDPKLPDDVIPVMCCDVVNRGVALY--DGKVFFGTLDARLVALDAKTGKVVWSK 146 (527)
T ss_pred CCEEEEECCCCcEEEEECCCCceeeEecCCCCcccccccccccccccceEE--CCEEEEEcCCCEEEEEECCCCCEEeec
Confidence 4567777778899999999999876544432111 00 011222 3456777777 9999999999998877
Q ss_pred EecccCCCCCceeEEEEEEccCCEEEEEcC------CCcEEEEeCCCCeeEEEeecccc---------------------
Q psy12614 193 SLDKSSKFSKNTAVWCVAFCADFTIITGDS------GGFVRFWDGKTGVQWSDVKTHKK--------------------- 245 (708)
Q Consensus 193 ~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~------dg~i~~wd~~~~~~~~~~~~~~~--------------------- 245 (708)
....... ...+.+--..-++.++++.. +|.|.-+|.++|+.+-.+..-..
T Consensus 147 ~~~~~~~---~~~~tssP~v~~g~Vivg~~~~~~~~~G~v~AlD~~TG~~lW~~~~~p~~~~~~~~~~~~~~~~~~~~tw 223 (527)
T TIGR03075 147 KNGDYKA---GYTITAAPLVVKGKVITGISGGEFGVRGYVTAYDAKTGKLVWRRYTVPGDMGYLDKADKPVGGEPGAKTW 223 (527)
T ss_pred ccccccc---cccccCCcEEECCEEEEeecccccCCCcEEEEEECCCCceeEeccCcCCCcccccccccccccccccCCC
Confidence 6431000 11122111112566665543 68999999999988765432110
Q ss_pred ----------Ce-EEEEEeCCCCEEEEEecC-----C-----------eEEEEEccCCcccccCCCCCCCCcceEEeEEE
Q psy12614 246 ----------DI-LALTVSEDENYLYCAGVD-----P-----------TVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNR 298 (708)
Q Consensus 246 ----------~i-~~~~~s~~~~~l~~~~~d-----g-----------~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~ 298 (708)
.+ ..+++.|+..+++.+..+ + .|.-.|+++ |+ .+|.. +.
T Consensus 224 ~~~~~~~gg~~~W~~~s~D~~~~lvy~~tGnp~p~~~~~r~gdnl~~~s~vAld~~T--------G~----~~W~~--Q~ 289 (527)
T TIGR03075 224 PGDAWKTGGGATWGTGSYDPETNLIYFGTGNPSPWNSHLRPGDNLYTSSIVARDPDT--------GK----IKWHY--QT 289 (527)
T ss_pred CCCccccCCCCccCceeEcCCCCeEEEeCCCCCCCCCCCCCCCCccceeEEEEcccc--------CC----EEEee--eC
Confidence 11 134677777777766533 1 455556666 55 33431 11
Q ss_pred eccc--------cc-eEEEEEeCC---EEEEEcCCCeEEEEeCCCCce
Q psy12614 299 VIHE--------GD-VKSLALHGN---RLYSGGLDSYLSLSYYPPKTL 334 (708)
Q Consensus 299 ~~~~--------~~-v~~l~~~~~---~l~s~~~d~~i~iw~~~~~~~ 334 (708)
..|. .+ +..+...+. .++.+..+|.+.+.|..++++
T Consensus 290 ~~~D~wD~d~~~~p~l~d~~~~G~~~~~v~~~~K~G~~~vlDr~tG~~ 337 (527)
T TIGR03075 290 TPHDEWDYDGVNEMILFDLKKDGKPRKLLAHADRNGFFYVLDRTNGKL 337 (527)
T ss_pred CCCCCccccCCCCcEEEEeccCCcEEEEEEEeCCCceEEEEECCCCce
Confidence 1221 01 111112243 778899999999999988764
|
This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens. |
| >COG3386 Gluconolactonase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.80 E-value=0.014 Score=55.99 Aligned_cols=219 Identities=17% Similarity=0.119 Sum_probs=129.4
Q ss_pred EEEEcCCCCEEEE-EeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECCCCeEeEEE
Q psy12614 31 CIACEPKSSRLAV-SRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMRRLNIKSST 107 (708)
Q Consensus 31 ~~~~s~~~~~la~-~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~~~~~~~ 107 (708)
.-.|.|+...|.- --..+.|.-||..+++.. .+.-. +.+.++... +..|+++... +.+++.+++..+..+
T Consensus 29 gP~w~~~~~~L~w~DI~~~~i~r~~~~~g~~~--~~~~p---~~~~~~~~~d~~g~Lv~~~~g--~~~~~~~~~~~~t~~ 101 (307)
T COG3386 29 GPVWDPDRGALLWVDILGGRIHRLDPETGKKR--VFPSP---GGFSSGALIDAGGRLIACEHG--VRLLDPDTGGKITLL 101 (307)
T ss_pred CccCcCCCCEEEEEeCCCCeEEEecCCcCceE--EEECC---CCcccceeecCCCeEEEEccc--cEEEeccCCceeEEe
Confidence 3457777775544 445678999999877653 33332 344554444 5666665443 456666655543222
Q ss_pred e-----ecCCceEEEEEecCCCEEEEEeC---------CCcEEEEEcc-CCcEEEEEecccccccEEEEEECCCCCEEEE
Q psy12614 108 A-----VTSGTCWCLSVHKKKRLLAAGTE---------QGHINLFQIS-DEGLLYEKLLDRQQGRILCTAWHSSGDYLVT 172 (708)
Q Consensus 108 ~-----~~~~~v~~~~~s~~~~~la~~~~---------d~~i~iwd~~-~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~ 172 (708)
. ......+.....|+|.+.+..-. ...-.+|-+. .+..+ +.+..+-..-+.|+||||++.|+.
T Consensus 102 ~~~~~~~~~~r~ND~~v~pdG~~wfgt~~~~~~~~~~~~~~G~lyr~~p~g~~~--~l~~~~~~~~NGla~SpDg~tly~ 179 (307)
T COG3386 102 AEPEDGLPLNRPNDGVVDPDGRIWFGDMGYFDLGKSEERPTGSLYRVDPDGGVV--RLLDDDLTIPNGLAFSPDGKTLYV 179 (307)
T ss_pred ccccCCCCcCCCCceeEcCCCCEEEeCCCccccCccccCCcceEEEEcCCCCEE--EeecCcEEecCceEECCCCCEEEE
Confidence 2 11245567888899887665322 0111344444 44444 455555556678999999988887
Q ss_pred ecCC--eEEEEEcCC--CceEE---EEEecccCCCCCceeEEEEEEccCCEEE-EEcCCC-cEEEEeCCCCeeEEEeecc
Q psy12614 173 GCAA--AVRVWDIHK--GHAIH---KMSLDKSSKFSKNTAVWCVAFCADFTII-TGDSGG-FVRFWDGKTGVQWSDVKTH 243 (708)
Q Consensus 173 ~~~d--~i~iwd~~~--~~~~~---~~~~~~~~~~~~~~~v~~~~~~~~~~l~-~~~~dg-~i~~wd~~~~~~~~~~~~~ 243 (708)
+... .|.-+++.. +..-. ..... ...+..-.++...+|.+. ++..+| .|.+|+.. |+++..+...
T Consensus 180 aDT~~~~i~r~~~d~~~g~~~~~~~~~~~~-----~~~G~PDG~~vDadG~lw~~a~~~g~~v~~~~pd-G~l~~~i~lP 253 (307)
T COG3386 180 ADTPANRIHRYDLDPATGPIGGRRGFVDFD-----EEPGLPDGMAVDADGNLWVAAVWGGGRVVRFNPD-GKLLGEIKLP 253 (307)
T ss_pred EeCCCCeEEEEecCcccCccCCcceEEEcc-----CCCCCCCceEEeCCCCEEEecccCCceEEEECCC-CcEEEEEECC
Confidence 7664 777777652 21111 11111 113444556666777655 333343 89999987 9999888877
Q ss_pred ccCeEEEEEe-CCCCEEEEEec
Q psy12614 244 KKDILALTVS-EDENYLYCAGV 264 (708)
Q Consensus 244 ~~~i~~~~~s-~~~~~l~~~~~ 264 (708)
...+++++|- |+.+.|++.+.
T Consensus 254 ~~~~t~~~FgG~~~~~L~iTs~ 275 (307)
T COG3386 254 VKRPTNPAFGGPDLNTLYITSA 275 (307)
T ss_pred CCCCccceEeCCCcCEEEEEec
Confidence 6788888884 44566665544
|
|
| >COG3391 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.76 E-value=0.031 Score=56.32 Aligned_cols=238 Identities=13% Similarity=0.084 Sum_probs=152.8
Q ss_pred cEEEEEEcCCCCEEEEEeC-CCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CC-EEEEEcCCCcEEEEECCCCeE
Q psy12614 28 VINCIACEPKSSRLAVSRA-DQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--ND-RLFSGGLQGFVNEYDMRRLNI 103 (708)
Q Consensus 28 ~v~~~~~s~~~~~la~~~~-dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~-~l~s~~~d~~i~vwd~~~~~~ 103 (708)
....+++.|++..+.+... ...+..-+... .........-. ..-..++.+ +. ..+....++.|.+.|..+.+.
T Consensus 32 ~~~~v~~~~~g~~~~v~~~~~~~~~~~~~~~-n~~~~~~~~g~--~~p~~i~v~~~~~~vyv~~~~~~~v~vid~~~~~~ 108 (381)
T COG3391 32 GPGGVAVNPDGTQVYVANSGSNDVSVIDATS-NTVTQSLSVGG--VYPAGVAVNPAGNKVYVTTGDSNTVSVIDTATNTV 108 (381)
T ss_pred CCceeEEcCccCEEEEEeecCceeeeccccc-ceeeeeccCCC--ccccceeeCCCCCeEEEecCCCCeEEEEcCcccce
Confidence 4567788888865554432 22455555442 22211111111 223455665 55 444555679999999888777
Q ss_pred eEEEeecCCceEEEEEecCCCEEEEEeC---CCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecC-C-eE
Q psy12614 104 KSSTAVTSGTCWCLSVHKKKRLLAAGTE---QGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCA-A-AV 178 (708)
Q Consensus 104 ~~~~~~~~~~v~~~~~s~~~~~la~~~~---d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~-d-~i 178 (708)
......-. ....++++|+++.+.++.. ++.+.+.|-.++..... ...+ ..+ ..++++|+|+.++.+.. + .|
T Consensus 109 ~~~~~vG~-~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t~~~~~~-~~vG-~~P-~~~a~~p~g~~vyv~~~~~~~v 184 (381)
T COG3391 109 LGSIPVGL-GPVGLAVDPDGKYVYVANAGNGNNTVSVIDAATNKVTAT-IPVG-NTP-TGVAVDPDGNKVYVTNSDDNTV 184 (381)
T ss_pred eeEeeecc-CCceEEECCCCCEEEEEecccCCceEEEEeCCCCeEEEE-EecC-CCc-ceEEECCCCCeEEEEecCCCeE
Confidence 66655332 6778999999988777655 68899999888888743 3322 233 89999999998877763 4 99
Q ss_pred EEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE--EEEEcCC--CcEEEEeCCCCeeEEE-eeccccCeEEEEEe
Q psy12614 179 RVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT--IITGDSG--GFVRFWDGKTGVQWSD-VKTHKKDILALTVS 253 (708)
Q Consensus 179 ~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--l~~~~~d--g~i~~wd~~~~~~~~~-~~~~~~~i~~~~~s 253 (708)
.+.|.......+ -... ... ........+.+.|+|. .++...+ +.+...|..++..... ..........+.++
T Consensus 185 ~vi~~~~~~v~~-~~~~-~~~-~~~~~P~~i~v~~~g~~~yV~~~~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~v~~~ 261 (381)
T COG3391 185 SVIDTSGNSVVR-GSVG-SLV-GVGTGPAGIAVDPDGNRVYVANDGSGSNNVLKIDTATGNVTATDLPVGSGAPRGVAVD 261 (381)
T ss_pred EEEeCCCcceec-cccc-ccc-ccCCCCceEEECCCCCEEEEEeccCCCceEEEEeCCCceEEEeccccccCCCCceeEC
Confidence 999976655553 1100 000 1244557789999995 3333333 6899999988877665 22111156678999
Q ss_pred CCCCEEEEEecC-CeEEEEEccC
Q psy12614 254 EDENYLYCAGVD-PTVVCFQRTR 275 (708)
Q Consensus 254 ~~~~~l~~~~~d-g~i~iw~~~~ 275 (708)
|+|+.+.+.... +.+.+-|..+
T Consensus 262 p~g~~~yv~~~~~~~V~vid~~~ 284 (381)
T COG3391 262 PAGKAAYVANSQGGTVSVIDGAT 284 (381)
T ss_pred CCCCEEEEEecCCCeEEEEeCCC
Confidence 999999888554 7888888776
|
|
| >PRK13616 lipoprotein LpqB; Provisional | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.0057 Score=64.55 Aligned_cols=188 Identities=16% Similarity=0.099 Sum_probs=103.3
Q ss_pred CceEEEEeCCCCcEEEEEc-------CCceEEEEEEecCCcceeEEeecCCcccccceeEEEEEecCCCeEEEEecCCc-
Q psy12614 404 ATIRCSVVSNDGKYVAYST-------ESCVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVLISADSTLLLAVSLNGP- 475 (708)
Q Consensus 404 ~~i~~~~~s~~g~~l~~~~-------d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~~~~~dg~- 475 (708)
..+.+.++||||+.+|+.. |..-.||-...++....+ ..+. ..+.-.|+|||..|++......
T Consensus 350 ~~vsspaiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~gg~~~~l-----t~g~----~~t~PsWspDG~~lw~v~dg~~~ 420 (591)
T PRK13616 350 GNITSAALSRSGRQVAAVVTLGRGAPDPASSLWVGPLGGVAVQV-----LEGH----SLTRPSWSLDADAVWVVVDGNTV 420 (591)
T ss_pred cCcccceECCCCCEEEEEEeecCCCCCcceEEEEEeCCCcceee-----ecCC----CCCCceECCCCCceEEEecCcce
Confidence 4577899999999998732 445566665543222122 1221 2344799999998887754322
Q ss_pred EEEecCCCeEEEEEecCCC-----CCccCcceEEEEECCCCcEEEEEecCCeEEE---EECCceeeec-------CCCCC
Q psy12614 476 LYIIDLSSLEIKYCVDPYK-----SNLMSDVISLVQMSECKQYIVCADRKSHVVI---WKNGQHHASL-------PRYRK 540 (708)
Q Consensus 476 i~~~~~~~~~~~~~~~~~~-----~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~i---w~~~~~~~~~-------~~~~~ 540 (708)
.+.........+..+.... .. ...|..+.|||||..+|... ++.|++ -....+...+ .....
T Consensus 421 ~~v~~~~~~gql~~~~vd~ge~~~~~--~g~Issl~wSpDG~RiA~i~-~g~v~Va~Vvr~~~G~~~l~~~~~l~~~l~~ 497 (591)
T PRK13616 421 VRVIRDPATGQLARTPVDASAVASRV--PGPISELQLSRDGVRAAMII-GGKVYLAVVEQTEDGQYALTNPREVGPGLGD 497 (591)
T ss_pred EEEeccCCCceEEEEeccCchhhhcc--CCCcCeEEECCCCCEEEEEE-CCEEEEEEEEeCCCCceeecccEEeecccCC
Confidence 1111110001111111000 11 44799999999999999876 578877 3333222222 22334
Q ss_pred CceEEEEcCCCCEEEEEecCCcEEEEEcC--CCCCCchhhhhhccCchhhhcCCCCeeEEEeCCCCCceEEEEcCeeE
Q psy12614 541 PSTAMAIHPTLSTLVTVYSDHRIVEFDLN--RKAFTTFSRKLETNHPNEWLSRQLPVLGIEFDPQDSSLIYLMDDSAL 616 (708)
Q Consensus 541 ~v~~l~~s~d~~~l~~~~~dg~i~vwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~~~~l~~~~~d~~i 616 (708)
.+.++.|..++.++ ++..++...+|.++ ..... .++ -.....++.+|+-+++ .|+....++.+
T Consensus 498 ~~~~l~W~~~~~L~-V~~~~~~~~v~~v~vDG~~~~--------~~~--~~n~~~~v~~vaa~~~--~iyv~~~~g~~ 562 (591)
T PRK13616 498 TAVSLDWRTGDSLV-VGRSDPEHPVWYVNLDGSNSD--------ALP--SRNLSAPVVAVAASPS--TVYVTDARAVL 562 (591)
T ss_pred ccccceEecCCEEE-EEecCCCCceEEEecCCcccc--------ccC--CCCccCceEEEecCCc--eEEEEcCCceE
Confidence 46889999988854 55555555555544 32211 001 0112456777777763 45666666643
|
|
| >COG3490 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.017 Score=52.34 Aligned_cols=109 Identities=16% Similarity=0.140 Sum_probs=76.0
Q ss_pred ccEEEEEECCCCCEEEEecC--C-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEEEEcCC------CcE
Q psy12614 156 GRILCTAWHSSGDYLVTGCA--A-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSG------GFV 226 (708)
Q Consensus 156 ~~v~~~~~s~d~~~l~~~~~--d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d------g~i 226 (708)
.+-..++|+|....-+.-.. . ...++|....+.+..+......| ..-.=.|+|||.++.++++ |.|
T Consensus 68 aR~Hgi~~~p~~~ravafARrPGtf~~vfD~~~~~~pv~~~s~~~RH-----fyGHGvfs~dG~~LYATEndfd~~rGVi 142 (366)
T COG3490 68 ARGHGIAFHPALPRAVAFARRPGTFAMVFDPNGAQEPVTLVSQEGRH-----FYGHGVFSPDGRLLYATENDFDPNRGVI 142 (366)
T ss_pred cccCCeecCCCCcceEEEEecCCceEEEECCCCCcCcEEEecccCce-----eecccccCCCCcEEEeecCCCCCCCceE
Confidence 34456788887655443333 3 68899999988888777654333 1223479999986655443 679
Q ss_pred EEEeCCCC-eeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEE
Q psy12614 227 RFWDGKTG-VQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCF 271 (708)
Q Consensus 227 ~~wd~~~~-~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw 271 (708)
-+||.+.+ +.+..+..|.-....+.+.+||+.++.+. |-|..-
T Consensus 143 GvYd~r~~fqrvgE~~t~GiGpHev~lm~DGrtlvvan--GGIeth 186 (366)
T COG3490 143 GVYDAREGFQRVGEFSTHGIGPHEVTLMADGRTLVVAN--GGIETH 186 (366)
T ss_pred EEEecccccceecccccCCcCcceeEEecCCcEEEEeC--Cceecc
Confidence 99998754 55777888888888999999999998774 444443
|
|
| >PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.07 Score=51.36 Aligned_cols=223 Identities=17% Similarity=0.201 Sum_probs=126.0
Q ss_pred CCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECCCCeEeEEE------
Q psy12614 36 PKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMRRLNIKSST------ 107 (708)
Q Consensus 36 ~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~~~~~~~------ 107 (708)
..++.|++|+++| |.+++........+... . .+|..+... -+.|++-+ |+.+.++++.........
T Consensus 5 ~~~~~L~vGt~~G-l~~~~~~~~~~~~~i~~--~--~~I~ql~vl~~~~~llvLs-d~~l~~~~L~~l~~~~~~~~~~~~ 78 (275)
T PF00780_consen 5 SWGDRLLVGTEDG-LYVYDLSDPSKPTRILK--L--SSITQLSVLPELNLLLVLS-DGQLYVYDLDSLEPVSTSAPLAFP 78 (275)
T ss_pred cCCCEEEEEECCC-EEEEEecCCccceeEee--c--ceEEEEEEecccCEEEEEc-CCccEEEEchhhcccccccccccc
Confidence 4578999999988 99999943332221222 2 459998888 44444443 599999998875443311
Q ss_pred --------eecCCceEEEE---EecCCCEEEEEeCCCcEEEEEccCC--cE-EEEEecccccccEEEEEECCCCCEEEEe
Q psy12614 108 --------AVTSGTCWCLS---VHKKKRLLAAGTEQGHINLFQISDE--GL-LYEKLLDRQQGRILCTAWHSSGDYLVTG 173 (708)
Q Consensus 108 --------~~~~~~v~~~~---~s~~~~~la~~~~d~~i~iwd~~~~--~~-~~~~~~~~~~~~v~~~~~s~d~~~l~~~ 173 (708)
......+...+ -.....+|+++ ....|.+|.+... +. ...+.+. -...+.+++|. ++.|+.+
T Consensus 79 ~~~~~~~~~~~~~~v~~f~~~~~~~~~~~L~va-~kk~i~i~~~~~~~~~f~~~~ke~~-lp~~~~~i~~~--~~~i~v~ 154 (275)
T PF00780_consen 79 KSRSLPTKLPETKGVSFFAVNGGHEGSRRLCVA-VKKKILIYEWNDPRNSFSKLLKEIS-LPDPPSSIAFL--GNKICVG 154 (275)
T ss_pred ccccccccccccCCeeEEeeccccccceEEEEE-ECCEEEEEEEECCcccccceeEEEE-cCCCcEEEEEe--CCEEEEE
Confidence 11223344444 11233345554 4458999988763 22 1112322 34778899998 6678888
Q ss_pred cCCeEEEEEcCCCceEEEEEecccC-----CCCCceeEEEEEEccCCEEEEEcCCCcEEEEeCCCCeeEE--EeeccccC
Q psy12614 174 CAAAVRVWDIHKGHAIHKMSLDKSS-----KFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQWS--DVKTHKKD 246 (708)
Q Consensus 174 ~~d~i~iwd~~~~~~~~~~~~~~~~-----~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~--~~~~~~~~ 246 (708)
..+...+.|+.++....-+...... .-....++..+.. +++.++.+. +..-.+.| ..|+..+ .+.- ...
T Consensus 155 ~~~~f~~idl~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~e~Ll~~-~~~g~fv~-~~G~~~r~~~i~W-~~~ 230 (275)
T PF00780_consen 155 TSKGFYLIDLNTGSPSELLDPSDSSSSFKSRNSSSKPLGIFQL-SDNEFLLCY-DNIGVFVN-KNGEPSRKSTIQW-SSA 230 (275)
T ss_pred eCCceEEEecCCCCceEEeCccCCcchhhhcccCCCceEEEEe-CCceEEEEe-cceEEEEc-CCCCcCcccEEEc-CCc
Confidence 8778899999877665444322100 0000122333333 344544433 23333344 3454433 3332 235
Q ss_pred eEEEEEeCCCCEEEEEecCCeEEEEEccC
Q psy12614 247 ILALTVSEDENYLYCAGVDPTVVCFQRTR 275 (708)
Q Consensus 247 i~~~~~s~~~~~l~~~~~dg~i~iw~~~~ 275 (708)
...+++.. .+|+..+. +.|.+|++.+
T Consensus 231 p~~~~~~~--pyli~~~~-~~iEV~~~~~ 256 (275)
T PF00780_consen 231 PQSVAYSS--PYLIAFSS-NSIEVRSLET 256 (275)
T ss_pred hhEEEEEC--CEEEEECC-CEEEEEECcC
Confidence 55666643 47777665 5699999999
|
These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity |
| >PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins | Back alignment and domain information |
|---|
Probab=97.62 E-value=0.0057 Score=65.48 Aligned_cols=201 Identities=10% Similarity=0.001 Sum_probs=122.4
Q ss_pred cCCCcEEEEeCCCCeeEEEeeccccC-eEEEEEeC-----CCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEE
Q psy12614 221 DSGGFVRFWDGKTGVQWSDVKTHKKD-ILALTVSE-----DENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVR 294 (708)
Q Consensus 221 ~~dg~i~~wd~~~~~~~~~~~~~~~~-i~~~~~s~-----~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~ 294 (708)
.....|+-.|++.|+.+.....+... |..++-.. .....+.|-.++.+..||.+- .. ....+..
T Consensus 501 ~~~~~ly~mDLe~GKVV~eW~~~~~~~v~~~~p~~K~aqlt~e~tflGls~n~lfriDpR~--------~~--~k~v~~~ 570 (794)
T PF08553_consen 501 NNPNKLYKMDLERGKVVEEWKVHDDIPVVDIAPDSKFAQLTNEQTFLGLSDNSLFRIDPRL--------SG--NKLVDSQ 570 (794)
T ss_pred CCCCceEEEecCCCcEEEEeecCCCcceeEecccccccccCCCceEEEECCCceEEeccCC--------CC--Cceeecc
Confidence 34678999999999999999877644 54443221 123456677788999999986 21 0000101
Q ss_pred eEEEeccccceEEEEEe-CCEEEEEcCCCeEEEEeCCCCceee-cCccCCCCceEEEEcCCcEEEEEcCCeEEEEEecC-
Q psy12614 295 SVNRVIHEGDVKSLALH-GNRLYSGGLDSYLSLSYYPPKTLVK-YPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSLGS- 371 (708)
Q Consensus 295 ~~~~~~~~~~v~~l~~~-~~~l~s~~~d~~i~iw~~~~~~~~~-~~~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~- 371 (708)
...+ .......|++-. ..+||.|+.+|.||+||--+....+ +++....+..+..+.||+++++..+..|.+++..-
T Consensus 571 ~k~Y-~~~~~Fs~~aTt~~G~iavgs~~G~IRLyd~~g~~AKT~lp~lG~pI~~iDvt~DGkwilaTc~tyLlLi~t~~~ 649 (794)
T PF08553_consen 571 SKQY-SSKNNFSCFATTEDGYIAVGSNKGDIRLYDRLGKRAKTALPGLGDPIIGIDVTADGKWILATCKTYLLLIDTLIK 649 (794)
T ss_pred cccc-ccCCCceEEEecCCceEEEEeCCCcEEeecccchhhhhcCCCCCCCeeEEEecCCCcEEEEeecceEEEEEEeee
Confidence 1111 234457777777 8899999999999999965544333 33333456789999999999999999999988642
Q ss_pred -CCCCCCCCCCCCCcccCCCCceEEEEEEecCCC----------ceEEEEeC----CCCcEEEEEcCCceEEEEEEe
Q psy12614 372 -AQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNA----------TIRCSVVS----NDGKYVAYSTESCVRLHSLDL 433 (708)
Q Consensus 372 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~i~~~~~s----~~g~~l~~~~d~~i~i~~~~~ 433 (708)
+......|.. ..+..-..+..+.+.+...|.. ..+...|+ ...+.|+++....+.+|++..
T Consensus 650 ~g~~~g~~GF~-~~~~~~~kp~Pr~L~L~pe~~~~~~~~~~~~~~Ft~a~Fnt~~~~~E~~IvtstG~f~v~Wnf~k 725 (794)
T PF08553_consen 650 DGKNSGKLGFE-KSFGKDKKPQPRRLQLKPEHVAYMQHETGKPISFTPAKFNTGIGKQETSIVTSTGPFVVTWNFKK 725 (794)
T ss_pred cCCccCccccc-cccCccCCCCCeEEecCHHHHHHHHhccCCCceeeceEEecCCCCccceEEEeccCEEEEEEHHH
Confidence 2110011111 1111111222334444332221 12234443 245678888899999999874
|
Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ]. |
| >COG3490 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.05 Score=49.39 Aligned_cols=232 Identities=13% Similarity=0.080 Sum_probs=138.7
Q ss_pred EEEEEe---CCEEEEEcCCCc-EEEEECCCCeEeEEEeecCCc--eEEEEEecCCCEEEEEeC-----CCcEEEEEccCC
Q psy12614 75 ECLTWF---NDRLFSGGLQGF-VNEYDMRRLNIKSSTAVTSGT--CWCLSVHKKKRLLAAGTE-----QGHINLFQISDE 143 (708)
Q Consensus 75 ~~l~~~---~~~l~s~~~d~~-i~vwd~~~~~~~~~~~~~~~~--v~~~~~s~~~~~la~~~~-----d~~i~iwd~~~~ 143 (708)
..|+|+ ..-++.+-.-|+ ..++|.+..+...++...++. .-.=.|||||.+|...-. -|.|-+||...+
T Consensus 71 Hgi~~~p~~~ravafARrPGtf~~vfD~~~~~~pv~~~s~~~RHfyGHGvfs~dG~~LYATEndfd~~rGViGvYd~r~~ 150 (366)
T COG3490 71 HGIAFHPALPRAVAFARRPGTFAMVFDPNGAQEPVTLVSQEGRHFYGHGVFSPDGRLLYATENDFDPNRGVIGVYDAREG 150 (366)
T ss_pred CCeecCCCCcceEEEEecCCceEEEECCCCCcCcEEEecccCceeecccccCCCCcEEEeecCCCCCCCceEEEEecccc
Confidence 335555 444555555554 457888887765554422221 112369999999987543 377999998844
Q ss_pred cEEEEEecccccccEEEEEECCCCCEEEEecCC-------------------eEEEEEcCCCceEEEEEecccCCCCCce
Q psy12614 144 GLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-------------------AVRVWDIHKGHAIHKMSLDKSSKFSKNT 204 (708)
Q Consensus 144 ~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-------------------~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 204 (708)
....-.+..|.-....+.+.+||+.++.+... .+.+.|..+|..+.+...+...+ .-
T Consensus 151 -fqrvgE~~t~GiGpHev~lm~DGrtlvvanGGIethpdfgR~~lNldsMePSlvlld~atG~liekh~Lp~~l~---~l 226 (366)
T COG3490 151 -FQRVGEFSTHGIGPHEVTLMADGRTLVVANGGIETHPDFGRTELNLDSMEPSLVLLDAATGNLIEKHTLPASLR---QL 226 (366)
T ss_pred -cceecccccCCcCcceeEEecCCcEEEEeCCceecccccCccccchhhcCccEEEEeccccchhhhccCchhhh---hc
Confidence 33335677777777889999999999887653 25567777788777776654333 66
Q ss_pred eEEEEEEccCCEEEEEcC-CCc-----EEEEeCCCCeeEEEee-------ccccCeEEEEEeCCCCEEEEEec-CCeEEE
Q psy12614 205 AVWCVAFCADFTIITGDS-GGF-----VRFWDGKTGVQWSDVK-------THKKDILALTVSEDENYLYCAGV-DPTVVC 270 (708)
Q Consensus 205 ~v~~~~~~~~~~l~~~~~-dg~-----i~~wd~~~~~~~~~~~-------~~~~~i~~~~~s~~~~~l~~~~~-dg~i~i 270 (708)
.+..++..+||++..|.. .|. -.+=-...++.+.-+. .....|-+++.+.+..+++..+- .+...+
T Consensus 227 SiRHld~g~dgtvwfgcQy~G~~~d~ppLvg~~~~g~~l~~~~~pee~~~~~anYigsiA~n~~~glV~lTSP~GN~~vi 306 (366)
T COG3490 227 SIRHLDIGRDGTVWFGCQYRGPRNDLPPLVGHFRKGEPLEFLDLPEEQTAAFANYIGSIAANRRDGLVALTSPRGNRAVI 306 (366)
T ss_pred ceeeeeeCCCCcEEEEEEeeCCCccCCcceeeccCCCcCcccCCCHHHHHHHHhhhhheeecccCCeEEEecCCCCeEEE
Confidence 788888888988665543 111 1111112233333322 23356777888766656655544 456789
Q ss_pred EEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEeCCEEEEEcCCCeEEEEe
Q psy12614 271 FQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALHGNRLYSGGLDSYLSLSY 328 (708)
Q Consensus 271 w~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~s~~~d~~i~iw~ 328 (708)
||..+ |. ... ...-.....++....-++..+.+|.+.++.
T Consensus 307 ~da~t--------G~---------vv~-~a~l~daaGva~~~~gf~vssg~G~~~~~s 346 (366)
T COG3490 307 WDAAT--------GA---------VVS-EAALPDAAGVAAAKGGFAVSSGQGRIIFYS 346 (366)
T ss_pred EEcCC--------Cc---------EEe-cccccccccceeccCceEEecCCceEEecc
Confidence 99999 74 111 111122334444444555566677777663
|
|
| >PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.0072 Score=46.70 Aligned_cols=99 Identities=12% Similarity=0.186 Sum_probs=71.0
Q ss_pred EEEEEECC---CC-CEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEEEEcCCCcEEEEeCC
Q psy12614 158 ILCTAWHS---SG-DYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGK 232 (708)
Q Consensus 158 v~~~~~s~---d~-~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~wd~~ 232 (708)
|.++++.. || +.|++|+.| .|++|+ ..+.+..+.. ...+.+++-...++++.+..+|+|-+|+-
T Consensus 2 V~al~~~d~d~dg~~eLlvGs~D~~IRvf~--~~e~~~Ei~e--------~~~v~~L~~~~~~~F~Y~l~NGTVGvY~~- 70 (111)
T PF14783_consen 2 VTALCLFDFDGDGENELLVGSDDFEIRVFK--GDEIVAEITE--------TDKVTSLCSLGGGRFAYALANGTVGVYDR- 70 (111)
T ss_pred eeEEEEEecCCCCcceEEEecCCcEEEEEe--CCcEEEEEec--------ccceEEEEEcCCCEEEEEecCCEEEEEeC-
Confidence 56666543 33 689999999 999998 4566777654 67788998888889999999999999985
Q ss_pred CCeeEEEeeccccCeEEEEEeC-C--C-CEEEEEecCCeEE
Q psy12614 233 TGVQWSDVKTHKKDILALTVSE-D--E-NYLYCAGVDPTVV 269 (708)
Q Consensus 233 ~~~~~~~~~~~~~~i~~~~~s~-~--~-~~l~~~~~dg~i~ 269 (708)
...+..++.. ..+.++++.. + | .-|++|-.+|.|-
T Consensus 71 -~~RlWRiKSK-~~~~~~~~~D~~gdG~~eLI~GwsnGkve 109 (111)
T PF14783_consen 71 -SQRLWRIKSK-NQVTSMAFYDINGDGVPELIVGWSNGKVE 109 (111)
T ss_pred -cceeeeeccC-CCeEEEEEEcCCCCCceEEEEEecCCeEE
Confidence 3344445433 3356665543 3 2 4688888888764
|
|
| >KOG4499|consensus | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.027 Score=49.47 Aligned_cols=214 Identities=14% Similarity=0.121 Sum_probs=124.2
Q ss_pred CCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--C---CEEEEEcCCCcEEEEECC--CCeEeEEEe--
Q psy12614 38 SSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--N---DRLFSGGLQGFVNEYDMR--RLNIKSSTA-- 108 (708)
Q Consensus 38 ~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~---~~l~s~~~d~~i~vwd~~--~~~~~~~~~-- 108 (708)
+.++.+--..|.|.-||+.+++..+..+++.. ..++.+- + .+.+.++..-.|.-||.. .....+++.
T Consensus 27 ~sLl~VDi~ag~v~r~D~~qn~v~ra~ie~p~----~ag~ilpv~~~~q~~~v~~G~kf~i~nwd~~~~~a~v~~t~~ev 102 (310)
T KOG4499|consen 27 QSLLYVDIEAGEVHRYDIEQNKVYRAKIEGPP----SAGFILPVEGGPQEFAVGCGSKFVIVNWDGVSESAKVYRTLFEV 102 (310)
T ss_pred ceEEEEEeccCceehhhhhhhheEEEEEecCc----ceeEEEEecCCCceEEEeecceEEEEEcccccceeeeeeecccc
Confidence 44566656678898899998877766666543 4444444 2 345555555556678733 333333321
Q ss_pred ---ecCCceEEEEEecCCCEEEEEeC---------CCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEe-cC
Q psy12614 109 ---VTSGTCWCLSVHKKKRLLAAGTE---------QGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTG-CA 175 (708)
Q Consensus 109 ---~~~~~v~~~~~s~~~~~la~~~~---------d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~-~~ 175 (708)
....+.+.-..+|+|++.+-.-. .|.++.|-... +. ......-+--..++|+.|.+.+... +.
T Consensus 103 ~~d~kknR~NDgkvdP~Gryy~GtMad~~~~le~~~g~Ly~~~~~h-~v---~~i~~~v~IsNgl~Wd~d~K~fY~iDsl 178 (310)
T KOG4499|consen 103 QPDRKKNRLNDGKVDPDGRYYGGTMADFGDDLEPIGGELYSWLAGH-QV---ELIWNCVGISNGLAWDSDAKKFYYIDSL 178 (310)
T ss_pred CchHHhcccccCccCCCCceeeeeeccccccccccccEEEEeccCC-Cc---eeeehhccCCccccccccCcEEEEEccC
Confidence 11345556677899998442211 23334433221 11 1111222334578898888776554 55
Q ss_pred C-eEEEEE--cCCCc-----eEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCeeEEEeeccccC
Q psy12614 176 A-AVRVWD--IHKGH-----AIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDVKTHKKD 246 (708)
Q Consensus 176 d-~i~iwd--~~~~~-----~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~ 246 (708)
+ +|.-|| ..+|. .+..+..... ......-.++...+|. ++++-..|+|...|..+|+.+..+.-....
T Consensus 179 n~~V~a~dyd~~tG~~snr~~i~dlrk~~~---~e~~~PDGm~ID~eG~L~Va~~ng~~V~~~dp~tGK~L~eiklPt~q 255 (310)
T KOG4499|consen 179 NYEVDAYDYDCPTGDLSNRKVIFDLRKSQP---FESLEPDGMTIDTEGNLYVATFNGGTVQKVDPTTGKILLEIKLPTPQ 255 (310)
T ss_pred ceEEeeeecCCCcccccCcceeEEeccCCC---cCCCCCCcceEccCCcEEEEEecCcEEEEECCCCCcEEEEEEcCCCc
Confidence 5 888888 44443 3333332110 0122223445555665 566777789999999999999999988999
Q ss_pred eEEEEEeCCC-CEEEEE
Q psy12614 247 ILALTVSEDE-NYLYCA 262 (708)
Q Consensus 247 i~~~~~s~~~-~~l~~~ 262 (708)
|++++|--.+ ..+++.
T Consensus 256 itsccFgGkn~d~~yvT 272 (310)
T KOG4499|consen 256 ITSCCFGGKNLDILYVT 272 (310)
T ss_pred eEEEEecCCCccEEEEE
Confidence 9999996432 344433
|
|
| >PF15390 DUF4613: Domain of unknown function (DUF4613) | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.14 Score=51.87 Aligned_cols=148 Identities=16% Similarity=0.207 Sum_probs=86.8
Q ss_pred CcEEEEEEe-CCEEEEEc---CCCcEEEEECCCCeEeEEEeecCCceEEEEEecC----CCEEEEEeCCCcEEEEEcc--
Q psy12614 72 NSIECLTWF-NDRLFSGG---LQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKK----KRLLAAGTEQGHINLFQIS-- 141 (708)
Q Consensus 72 ~~v~~l~~~-~~~l~s~~---~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~----~~~la~~~~d~~i~iwd~~-- 141 (708)
.+|..++|. |+.++-.. .+|.+++=|- +.+ +.-..|..+.|.|- ...|.+......|.+|.+.
T Consensus 20 HPvhGlaWTDGkqVvLT~L~l~~gE~kfGds---~vi----GqFEhV~GlsW~P~~~~~~paLLAVQHkkhVtVWqL~~s 92 (671)
T PF15390_consen 20 HPVHGLAWTDGKQVVLTDLQLHNGEPKFGDS---KVI----GQFEHVHGLSWAPPCTADTPALLAVQHKKHVTVWQLCPS 92 (671)
T ss_pred ccccceEecCCCEEEEEeeeeeCCccccCCc---cEe----eccceeeeeeecCcccCCCCceEEEeccceEEEEEeccC
Confidence 468899999 66655332 2333332221 122 33356888999884 3234444667889999986
Q ss_pred ---CCcEEEEEecc-ccccc--EEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccC
Q psy12614 142 ---DEGLLYEKLLD-RQQGR--ILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCAD 214 (708)
Q Consensus 142 ---~~~~~~~~~~~-~~~~~--v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 214 (708)
.++....++-. +..-+ -..+.|+|....|+.-... .-.+.++......-+.... ..+.|.|.+|.+|
T Consensus 93 ~~e~~K~l~sQtcEi~e~~pvLpQGCVWHPk~~iL~VLT~~dvSV~~sV~~d~srVkaDi~------~~G~IhCACWT~D 166 (671)
T PF15390_consen 93 TTERNKLLMSQTCEIREPFPVLPQGCVWHPKKAILTVLTARDVSVLPSVHCDSSRVKADIK------TSGLIHCACWTKD 166 (671)
T ss_pred ccccccceeeeeeeccCCcccCCCcccccCCCceEEEEecCceeEeeeeeeCCceEEEecc------CCceEEEEEecCc
Confidence 22322111111 01111 2356799999998877666 4455666544333333332 2788999999999
Q ss_pred CE--EEEEcCCCcEEEEeCC
Q psy12614 215 FT--IITGDSGGFVRFWDGK 232 (708)
Q Consensus 215 ~~--l~~~~~dg~i~~wd~~ 232 (708)
|+ +++.++.=.-++||-.
T Consensus 167 G~RLVVAvGSsLHSyiWd~~ 186 (671)
T PF15390_consen 167 GQRLVVAVGSSLHSYIWDSA 186 (671)
T ss_pred CCEEEEEeCCeEEEEEecCc
Confidence 94 4455555667889854
|
|
| >COG3391 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.47 E-value=0.15 Score=51.40 Aligned_cols=252 Identities=11% Similarity=0.095 Sum_probs=160.7
Q ss_pred EEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeC-CCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEE
Q psy12614 93 VNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTE-QGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLV 171 (708)
Q Consensus 93 i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~ 171 (708)
+.+++..+.+....+..+. ....++..+++..+..... ...+...+....... .....-...-..++.++++..++
T Consensus 13 ~~v~~~~~~~~~~~~~~~~-~~~~v~~~~~g~~~~v~~~~~~~~~~~~~~~n~~~--~~~~~g~~~p~~i~v~~~~~~vy 89 (381)
T COG3391 13 VSVINTGTNKVTAAISLGR-GPGGVAVNPDGTQVYVANSGSNDVSVIDATSNTVT--QSLSVGGVYPAGVAVNPAGNKVY 89 (381)
T ss_pred eEEEeecccEEEEEeecCC-CCceeEEcCccCEEEEEeecCceeeecccccceee--eeccCCCccccceeeCCCCCeEE
Confidence 5666666655555544333 5667888888865554432 224555555422221 11111114456778889998666
Q ss_pred EecCC--eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcC---CCcEEEEeCCCCeeEEEeecccc
Q psy12614 172 TGCAA--AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDS---GGFVRFWDGKTGVQWSDVKTHKK 245 (708)
Q Consensus 172 ~~~~d--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~---dg~i~~wd~~~~~~~~~~~~~~~ 245 (708)
....+ .|.+.|..+.+.......+ .....+++++++. +.++.. ++.+.+.|..+++.+.....-..
T Consensus 90 v~~~~~~~v~vid~~~~~~~~~~~vG--------~~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t~~~~~~~~vG~~ 161 (381)
T COG3391 90 VTTGDSNTVSVIDTATNTVLGSIPVG--------LGPVGLAVDPDGKYVYVANAGNGNNTVSVIDAATNKVTATIPVGNT 161 (381)
T ss_pred EecCCCCeEEEEcCcccceeeEeeec--------cCCceEEECCCCCEEEEEecccCCceEEEEeCCCCeEEEEEecCCC
Confidence 65543 9999998888888888765 2567899999994 444433 68999999999988888654434
Q ss_pred CeEEEEEeCCCCEEEEEe-cCCeEEEEEccCCcccccCCCCCCCCcceEEeEE-----EeccccceEEEEEe--CCEEEE
Q psy12614 246 DILALTVSEDENYLYCAG-VDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVN-----RVIHEGDVKSLALH--GNRLYS 317 (708)
Q Consensus 246 ~i~~~~~s~~~~~l~~~~-~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~-----~~~~~~~v~~l~~~--~~~l~s 317 (708)
+ ..++++|+|+.++.+. .++.+.+.|... .. ... ...-...-..+.+. +..+..
T Consensus 162 P-~~~a~~p~g~~vyv~~~~~~~v~vi~~~~--------~~---------v~~~~~~~~~~~~~~P~~i~v~~~g~~~yV 223 (381)
T COG3391 162 P-TGVAVDPDGNKVYVTNSDDNTVSVIDTSG--------NS---------VVRGSVGSLVGVGTGPAGIAVDPDGNRVYV 223 (381)
T ss_pred c-ceEEECCCCCeEEEEecCCCeEEEEeCCC--------cc---------eeccccccccccCCCCceEEECCCCCEEEE
Confidence 4 8999999999777666 678999999776 21 110 01111222344454 554444
Q ss_pred EcCC---CeEEEEeCCCCceeecCccCC--CCceEEEEcCCcEEEEE--cCCeEEEEEecCCC
Q psy12614 318 GGLD---SYLSLSYYPPKTLVKYPCTLA--QSTPVSLAKDIQHVLLQ--YTSHLELWSLGSAQ 373 (708)
Q Consensus 318 ~~~d---~~i~iw~~~~~~~~~~~~~~~--~~~~~~~s~~~~~l~~~--~~~~i~i~~~~~~~ 373 (708)
.... +.+...|..+........+.. ....+..+|+|+.+.+. ..+.+.+.|..+..
T Consensus 224 ~~~~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~v~~~p~g~~~yv~~~~~~~V~vid~~~~~ 286 (381)
T COG3391 224 ANDGSGSNNVLKIDTATGNVTATDLPVGSGAPRGVAVDPAGKAAYVANSQGGTVSVIDGATDR 286 (381)
T ss_pred EeccCCCceEEEEeCCCceEEEeccccccCCCCceeECCCCCEEEEEecCCCeEEEEeCCCCc
Confidence 3332 588888888877555421222 46789999999998875 44677777766644
|
|
| >KOG4640|consensus | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.00069 Score=67.76 Aligned_cols=93 Identities=15% Similarity=0.124 Sum_probs=76.7
Q ss_pred CcceEEEEECCCCcEEEEEecCCeEEEEECC-ceeeecCCCCCCce-EEEEcCCCCEEEEEecCCcEEEEEcCCCCCCch
Q psy12614 499 SDVISLVQMSECKQYIVCADRKSHVVIWKNG-QHHASLPRYRKPST-AMAIHPTLSTLVTVYSDHRIVEFDLNRKAFTTF 576 (708)
Q Consensus 499 ~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~-~~~~~~~~~~~~v~-~l~~s~d~~~l~~~~~dg~i~vwd~~~~~~~~~ 576 (708)
...+..+.|+|.-..+|.+..+|.|-++.+. ...++++-|...++ +++|.|||+.||+|-.||+|++-|++++....
T Consensus 20 ~~~i~~~ewnP~~dLiA~~t~~gelli~R~n~qRlwtip~p~~~v~~sL~W~~DGkllaVg~kdG~I~L~Dve~~~~l~- 98 (665)
T KOG4640|consen 20 PINIKRIEWNPKMDLIATRTEKGELLIHRLNWQRLWTIPIPGENVTASLCWRPDGKLLAVGFKDGTIRLHDVEKGGRLV- 98 (665)
T ss_pred ccceEEEEEcCccchhheeccCCcEEEEEeccceeEeccCCCCccceeeeecCCCCEEEEEecCCeEEEEEccCCCcee-
Confidence 4468889999999999999999999999999 55668888888888 99999999999999999999999999987651
Q ss_pred hhhhhccCchhhhcCCCCeeEEEeC
Q psy12614 577 SRKLETNHPNEWLSRQLPVLGIEFD 601 (708)
Q Consensus 577 ~~~~~~~~~~~~~~~~~~i~~l~~s 601 (708)
.........|..+-|+
T Consensus 99 ---------~~~~s~e~~is~~~w~ 114 (665)
T KOG4640|consen 99 ---------SFLFSVETDISKGIWD 114 (665)
T ss_pred ---------ccccccccchheeecc
Confidence 1112234467777776
|
|
| >COG3204 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.1 Score=47.97 Aligned_cols=211 Identities=10% Similarity=0.031 Sum_probs=125.9
Q ss_pred Cccceeeeeeee-ccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEE
Q psy12614 10 TMGTYGVHNIKF-YAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFS 86 (708)
Q Consensus 10 ~~~~~~~~~~~~-~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s 86 (708)
++.++++.-..- +.|-...|.++.|+|+.+.|.+......-.||=...|..++ +++-.. -..-..+.|. +.+.++
T Consensus 68 ~l~~y~~~i~akpi~g~~~nvS~LTynp~~rtLFav~n~p~~iVElt~~Gdlir-tiPL~g-~~DpE~Ieyig~n~fvi~ 145 (316)
T COG3204 68 YLLEYRARIDAKPILGETANVSSLTYNPDTRTLFAVTNKPAAIVELTKEGDLIR-TIPLTG-FSDPETIEYIGGNQFVIV 145 (316)
T ss_pred ccCCceEEEeccccccccccccceeeCCCcceEEEecCCCceEEEEecCCceEE-Eecccc-cCChhHeEEecCCEEEEE
Confidence 344444433322 55666779999999999999988877777777777788776 443222 2456788898 445555
Q ss_pred EcCCCcEEEEECCCCeEeE-------EEe--ec-CCceEEEEEecCCCEEEEEeCCCcEEEEEccCCc-EEEEEecccc-
Q psy12614 87 GGLQGFVNEYDMRRLNIKS-------STA--VT-SGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEG-LLYEKLLDRQ- 154 (708)
Q Consensus 87 ~~~d~~i~vwd~~~~~~~~-------~~~--~~-~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~-~~~~~~~~~~- 154 (708)
--.++.+.+..+.....+. .+. .+ +...-.+||.|.+..|.++-+..-+.||.+.... .........+
T Consensus 146 dER~~~l~~~~vd~~t~~~~~~~~~i~L~~~~k~N~GfEGlA~d~~~~~l~~aKEr~P~~I~~~~~~~~~l~~~~~~~~~ 225 (316)
T COG3204 146 DERDRALYLFTVDADTTVISAKVQKIPLGTTNKKNKGFEGLAWDPVDHRLFVAKERNPIGIFEVTQSPSSLSVHASLDPT 225 (316)
T ss_pred ehhcceEEEEEEcCCccEEeccceEEeccccCCCCcCceeeecCCCCceEEEEEccCCcEEEEEecCCcccccccccCcc
Confidence 5568888888776653221 111 12 4457789999999999988887888888877443 1111111111
Q ss_pred ------cccEEEEEECCCCCEEEE-ecCC-eEEEEEcCCCceEEEEEecccCCCCC---ceeEEEEEEccCCEEEEEcCC
Q psy12614 155 ------QGRILCTAWHSSGDYLVT-GCAA-AVRVWDIHKGHAIHKMSLDKSSKFSK---NTAVWCVAFCADFTIITGDSG 223 (708)
Q Consensus 155 ------~~~v~~~~~s~d~~~l~~-~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~---~~~v~~~~~~~~~~l~~~~~d 223 (708)
-..|.++.|.+....|++ +.++ .+.-.|. .|..+..+......| +- -.....++..++|.+...+.-
T Consensus 226 ~~~~~f~~DvSgl~~~~~~~~LLVLS~ESr~l~Evd~-~G~~~~~lsL~~g~~-gL~~dipqaEGiamDd~g~lYIvSEP 303 (316)
T COG3204 226 ADRDLFVLDVSGLEFNAITNSLLVLSDESRRLLEVDL-SGEVIELLSLTKGNH-GLSSDIPQAEGIAMDDDGNLYIVSEP 303 (316)
T ss_pred cccceEeeccccceecCCCCcEEEEecCCceEEEEec-CCCeeeeEEeccCCC-CCcccCCCcceeEECCCCCEEEEecC
Confidence 134677888875554544 4445 6666665 455555554432211 11 122234555555554444443
Q ss_pred C
Q psy12614 224 G 224 (708)
Q Consensus 224 g 224 (708)
+
T Consensus 304 n 304 (316)
T COG3204 304 N 304 (316)
T ss_pred C
Confidence 3
|
|
| >PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.13 Score=49.09 Aligned_cols=277 Identities=11% Similarity=0.045 Sum_probs=125.0
Q ss_pred ceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCeeEEEee--cc---ccCeEEEEEeCCCCEEEEEecCCeEEEEEccCC
Q psy12614 203 NTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDVK--TH---KKDILALTVSEDENYLYCAGVDPTVVCFQRTRK 276 (708)
Q Consensus 203 ~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~~--~~---~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~ 276 (708)
...+.+|.|..+.+ +++|.. +.|. -....|+.-.... .. .....++.|..+ ..++ ++..+. .+...+.
T Consensus 16 ~~~l~dV~F~d~~~G~~VG~~-g~il-~T~DGG~tW~~~~~~~~~~~~~~l~~I~f~~~-~g~i-vG~~g~-ll~T~Dg- 89 (302)
T PF14870_consen 16 DKPLLDVAFVDPNHGWAVGAY-GTIL-KTTDGGKTWQPVSLDLDNPFDYHLNSISFDGN-EGWI-VGEPGL-LLHTTDG- 89 (302)
T ss_dssp SS-EEEEEESSSS-EEEEETT-TEEE-EESSTTSS-EE-----S-----EEEEEEEETT-EEEE-EEETTE-EEEESST-
T ss_pred CCceEEEEEecCCEEEEEecC-CEEE-EECCCCccccccccCCCccceeeEEEEEecCC-ceEE-EcCCce-EEEecCC-
Confidence 66899999996666 666654 4332 2222233222111 11 123566777643 3334 444553 3333333
Q ss_pred cccccCCCCCCCCcceEEeEEEeccccceEEEEEe-CCEEEEEcCCCeEEEEeCCCCceeecC-ccCCCCceEEEEcCCc
Q psy12614 277 PQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH-GNRLYSGGLDSYLSLSYYPPKTLVKYP-CTLAQSTPVSLAKDIQ 354 (708)
Q Consensus 277 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~-~~~l~s~~~d~~i~iw~~~~~~~~~~~-~~~~~~~~~~~s~~~~ 354 (708)
| ..|..+..-..-.+....+... ......++..|.|..=.=.......+. ........+..++||+
T Consensus 90 -------G-----~tW~~v~l~~~lpgs~~~i~~l~~~~~~l~~~~G~iy~T~DgG~tW~~~~~~~~gs~~~~~r~~dG~ 157 (302)
T PF14870_consen 90 -------G-----KTWERVPLSSKLPGSPFGITALGDGSAELAGDRGAIYRTTDGGKTWQAVVSETSGSINDITRSSDGR 157 (302)
T ss_dssp -------T-----SS-EE----TT-SS-EEEEEEEETTEEEEEETT--EEEESSTTSSEEEEE-S----EEEEEE-TTS-
T ss_pred -------C-----CCcEEeecCCCCCCCeeEEEEcCCCcEEEEcCCCcEEEeCCCCCCeeEcccCCcceeEeEEECCCCc
Confidence 3 3565443211122233333333 444444555565443222222222222 2233445677789999
Q ss_pred EEEEEcCCeEE-EEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEEEcCCceEEEEEEe
Q psy12614 355 HVLLQYTSHLE-LWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYSTESCVRLHSLDL 433 (708)
Q Consensus 355 ~l~~~~~~~i~-i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~d~~i~i~~~~~ 433 (708)
+++++..+.+. -|+..... -.........+|.++.|+|++.+.+.+..|.|+.=+...
T Consensus 158 ~vavs~~G~~~~s~~~G~~~---------------------w~~~~r~~~~riq~~gf~~~~~lw~~~~Gg~~~~s~~~~ 216 (302)
T PF14870_consen 158 YVAVSSRGNFYSSWDPGQTT---------------------WQPHNRNSSRRIQSMGFSPDGNLWMLARGGQIQFSDDPD 216 (302)
T ss_dssp EEEEETTSSEEEEE-TT-SS----------------------EEEE--SSS-EEEEEE-TTS-EEEEETTTEEEEEE-TT
T ss_pred EEEEECcccEEEEecCCCcc---------------------ceEEccCccceehhceecCCCCEEEEeCCcEEEEccCCC
Confidence 99998777654 55544321 222223456889999999999888888888887766211
Q ss_pred cCCcceeEEeecCCcccccceeEEEEEecCCCeEEEEecCCcEEEecCCCeEEEEEecCCCCCccCcceEEEEECCCCcE
Q psy12614 434 DGDKPQISRIKNLPAPLFKSIFTHVLISADSTLLLAVSLNGPLYIIDLSSLEIKYCVDPYKSNLMSDVISLVQMSECKQY 513 (708)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~ 513 (708)
..-.+.+. ..+.......+..++|.+++...|+++....+...+.+ +.-+........ ......+.|.++.+-
T Consensus 217 --~~~~w~~~-~~~~~~~~~~~ld~a~~~~~~~wa~gg~G~l~~S~DgG--ktW~~~~~~~~~--~~n~~~i~f~~~~~g 289 (302)
T PF14870_consen 217 --DGETWSEP-IIPIKTNGYGILDLAYRPPNEIWAVGGSGTLLVSTDGG--KTWQKDRVGENV--PSNLYRIVFVNPDKG 289 (302)
T ss_dssp --EEEEE----B-TTSS--S-EEEEEESSSS-EEEEESTT-EEEESSTT--SS-EE-GGGTTS--SS---EEEEEETTEE
T ss_pred --Cccccccc-cCCcccCceeeEEEEecCCCCEEEEeCCccEEEeCCCC--ccceECccccCC--CCceEEEEEcCCCce
Confidence 11112210 02221224456779999998888755444335555655 222222221122 456788888877777
Q ss_pred EEEEecCCeEEEE
Q psy12614 514 IVCADRKSHVVIW 526 (708)
Q Consensus 514 l~~~~~d~~i~iw 526 (708)
++.| .+|.|--|
T Consensus 290 f~lG-~~G~ll~~ 301 (302)
T PF14870_consen 290 FVLG-QDGVLLRY 301 (302)
T ss_dssp EEE--STTEEEEE
T ss_pred EEEC-CCcEEEEe
Confidence 7776 68877655
|
|
| >PRK13616 lipoprotein LpqB; Provisional | Back alignment and domain information |
|---|
Probab=97.37 E-value=0.014 Score=61.64 Aligned_cols=185 Identities=16% Similarity=0.182 Sum_probs=104.6
Q ss_pred CcEEEEEEcCCCCEEEEEe------CCC--cEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCC------
Q psy12614 27 KVINCIACEPKSSRLAVSR------ADQ--SIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQ------ 90 (708)
Q Consensus 27 ~~v~~~~~s~~~~~la~~~------~dg--~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d------ 90 (708)
..+...++||||+.+|... .|+ .|.+++... .. .....+ ...+.-.|+ |+.|++....
T Consensus 350 ~~vsspaiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~gg-~~-~~lt~g----~~~t~PsWspDG~~lw~v~dg~~~~~v 423 (591)
T PRK13616 350 GNITSAALSRSGRQVAAVVTLGRGAPDPASSLWVGPLGG-VA-VQVLEG----HSLTRPSWSLDADAVWVVVDGNTVVRV 423 (591)
T ss_pred cCcccceECCCCCEEEEEEeecCCCCCcceEEEEEeCCC-cc-eeeecC----CCCCCceECCCCCceEEEecCcceEEE
Confidence 4678999999999988765 244 344445422 22 223333 237777888 5766665422
Q ss_pred ------CcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEE---EEccCCcEEE--EEecc-cccccE
Q psy12614 91 ------GFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINL---FQISDEGLLY--EKLLD-RQQGRI 158 (708)
Q Consensus 91 ------~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~i---wd~~~~~~~~--~~~~~-~~~~~v 158 (708)
+.+.+.++..+.... ...+.|..+.|||||.++|... ++.|++ -....|+... ...+. .-...+
T Consensus 424 ~~~~~~gql~~~~vd~ge~~~---~~~g~Issl~wSpDG~RiA~i~-~g~v~Va~Vvr~~~G~~~l~~~~~l~~~l~~~~ 499 (591)
T PRK13616 424 IRDPATGQLARTPVDASAVAS---RVPGPISELQLSRDGVRAAMII-GGKVYLAVVEQTEDGQYALTNPREVGPGLGDTA 499 (591)
T ss_pred eccCCCceEEEEeccCchhhh---ccCCCcCeEEECCCCCEEEEEE-CCEEEEEEEEeCCCCceeecccEEeecccCCcc
Confidence 334444554444332 2346799999999999998866 477777 4444554221 01122 223446
Q ss_pred EEEEECCCCCEEEEecCC-eEEEEEcCC-CceEEEEEecccCCCCCceeEEEEEEccCCEEEEEcCCCcEEE
Q psy12614 159 LCTAWHSSGDYLVTGCAA-AVRVWDIHK-GHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRF 228 (708)
Q Consensus 159 ~~~~~s~d~~~l~~~~~d-~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~ 228 (708)
.++.|.+++.++ .+..+ .-.+|.+.- |.....+... .....+..++-++ +.++..+.+|.+.+
T Consensus 500 ~~l~W~~~~~L~-V~~~~~~~~v~~v~vDG~~~~~~~~~-----n~~~~v~~vaa~~-~~iyv~~~~g~~~l 564 (591)
T PRK13616 500 VSLDWRTGDSLV-VGRSDPEHPVWYVNLDGSNSDALPSR-----NLSAPVVAVAASP-STVYVTDARAVLQL 564 (591)
T ss_pred ccceEecCCEEE-EEecCCCCceEEEecCCccccccCCC-----CccCceEEEecCC-ceEEEEcCCceEEe
Confidence 889999999855 44444 333444331 3322221211 1245566676665 35666666664443
|
|
| >smart00320 WD40 WD40 repeats | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.0006 Score=42.04 Aligned_cols=36 Identities=25% Similarity=0.491 Sum_probs=32.2
Q ss_pred eeeccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEe
Q psy12614 19 IKFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWD 54 (708)
Q Consensus 19 ~~~~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd 54 (708)
...+..|...|.++.|+|++.++++++.|+.+++|+
T Consensus 5 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~ 40 (40)
T smart00320 5 LKTLKGHTGPVTSVAFSPDGKYLASASDDGTIKLWD 40 (40)
T ss_pred EEEEEecCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence 445668899999999999999999999999999996
|
Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. |
| >smart00320 WD40 WD40 repeats | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.00078 Score=41.50 Aligned_cols=39 Identities=15% Similarity=0.303 Sum_probs=34.6
Q ss_pred CeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEE
Q psy12614 101 LNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQ 139 (708)
Q Consensus 101 ~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd 139 (708)
+++...+..|...|.++.|++++..+++++.|+.+++|+
T Consensus 2 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~ 40 (40)
T smart00320 2 GELLKTLKGHTGPVTSVAFSPDGKYLASASDDGTIKLWD 40 (40)
T ss_pred cEEEEEEEecCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence 356677778999999999999999999999999999996
|
Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. |
| >KOG4640|consensus | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.0016 Score=65.32 Aligned_cols=92 Identities=18% Similarity=0.217 Sum_probs=76.2
Q ss_pred CcEEEEEEe--CCEEEEEcCCCcEEEEECCCCeEeEEEeecCCceE-EEEEecCCCEEEEEeCCCcEEEEEccCCcEEEE
Q psy12614 72 NSIECLTWF--NDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCW-CLSVHKKKRLLAAGTEQGHINLFQISDEGLLYE 148 (708)
Q Consensus 72 ~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~-~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~ 148 (708)
..|.-+.|+ -+.+|.+..+|.|.+..+. .+.+.++..|+..++ +++|.|||+.||+|-.||+|++-|++++..+..
T Consensus 21 ~~i~~~ewnP~~dLiA~~t~~gelli~R~n-~qRlwtip~p~~~v~~sL~W~~DGkllaVg~kdG~I~L~Dve~~~~l~~ 99 (665)
T KOG4640|consen 21 INIKRIEWNPKMDLIATRTEKGELLIHRLN-WQRLWTIPIPGENVTASLCWRPDGKLLAVGFKDGTIRLHDVEKGGRLVS 99 (665)
T ss_pred cceEEEEEcCccchhheeccCCcEEEEEec-cceeEeccCCCCccceeeeecCCCCEEEEEecCCeEEEEEccCCCceec
Confidence 567788888 7889999999999999888 677888887777777 999999999999999999999999999887643
Q ss_pred EecccccccEEEEEECC
Q psy12614 149 KLLDRQQGRILCTAWHS 165 (708)
Q Consensus 149 ~~~~~~~~~v~~~~~s~ 165 (708)
. ...-...|.++.|++
T Consensus 100 ~-~~s~e~~is~~~w~~ 115 (665)
T KOG4640|consen 100 F-LFSVETDISKGIWDR 115 (665)
T ss_pred c-ccccccchheeeccc
Confidence 2 233456788888863
|
|
| >COG3292 Predicted periplasmic ligand-binding sensor domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.17 E-value=0.28 Score=49.48 Aligned_cols=438 Identities=13% Similarity=0.083 Sum_probs=194.4
Q ss_pred CcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe-CCEEEEEcCCCcEEEEECCCCeEeE
Q psy12614 27 KVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF-NDRLFSGGLQGFVNEYDMRRLNIKS 105 (708)
Q Consensus 27 ~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~-~~~l~s~~~d~~i~vwd~~~~~~~~ 105 (708)
..|.++....|| +|-.+..+|.|+..+..... .+++|. +..+.-. ...|......|.|.+=+........
T Consensus 40 nv~~~~~q~~dG-ylW~at~~G~vrY~g~~~f~----vf~gn~----~~~ly~~gtr~Ll~s~~~gll~lga~~~~d~~q 110 (671)
T COG3292 40 NVVRAMLQDADG-YLWLATSDGLVRYDGPNDFG----VFPGNS----VLGLYPDGTRLLLVSSENGLLALGALGRRDFIQ 110 (671)
T ss_pred HHHHHHhhccCC-cEEEEecccEEEecCCcccc----cccCCc----eEEEecCcceEEeeeccchhhhhccccceecee
Confidence 445667777777 55556678888877744322 344433 5554444 3334444444433332222111111
Q ss_pred EEeecCCceEEEEEec------CCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCCeEE
Q psy12614 106 STAVTSGTCWCLSVHK------KKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAAAVR 179 (708)
Q Consensus 106 ~~~~~~~~v~~~~~s~------~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~i~ 179 (708)
.. -.+...+.+.++ +.+.+-....+.-|..-|..+.+........-...+|.++.+.-.|. +-.|+.+.+.
T Consensus 111 ~y--r~~~~~s~a~h~lt~lIddaqllw~~~~~~gV~~~d~lg~~~v~~~r~ll~d~~V~aLv~D~~g~-lWvgT~dGL~ 187 (671)
T COG3292 111 VY--RGGVAKSDALHELTALIDDAQLLWLHASVIGVDSADALGREAVKDVRPLLKDTPVVALVFDANGR-LWVGTPDGLS 187 (671)
T ss_pred ec--ccceeeccCccccccccchhhhhhhccccCCccccccchhhhccCccccccCccceeeeeeccCc-EEEecCCcce
Confidence 11 011111111221 11122222223333333433333221111122356788899888774 5567777888
Q ss_pred EEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEEEEcCCCcEEEEeCCCCeeEEEee-ccccCeEEEEEeCCCCE
Q psy12614 180 VWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVK-THKKDILALTVSEDENY 258 (708)
Q Consensus 180 iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~-~~~~~i~~~~~s~~~~~ 258 (708)
.+|..+++.+..-.... ...|..+...-.|++.+|+.+| |++.+.+..+...-.. -....|..+.-..+| .
T Consensus 188 ~fd~~~gkalql~s~~~------dk~I~al~~d~qg~LWVGTdqG-v~~~e~~G~~~sn~~~~lp~~~I~ll~qD~qG-~ 259 (671)
T COG3292 188 YFDAGRGKALQLASPPL------DKAINALIADVQGRLWVGTDQG-VYLQEAEGWRASNWGPMLPSGNILLLVQDAQG-E 259 (671)
T ss_pred EEccccceEEEcCCCcc------hhhHHHHHHHhcCcEEEEeccc-eEEEchhhccccccCCCCcchheeeeecccCC-C
Confidence 99988887766554331 3566666666678888888776 7777765422211111 123444444444444 4
Q ss_pred EEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe-CCEEEEEcCCCeEEEEeCCCCceeec
Q psy12614 259 LYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH-GNRLYSGGLDSYLSLSYYPPKTLVKY 337 (708)
Q Consensus 259 l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~-~~~l~s~~~d~~i~iw~~~~~~~~~~ 337 (708)
+-.|+..|..+. .... .. .+. +......-.+.|.++..+ ...|-+++.++.+++-+-+-.....+
T Consensus 260 lWiGTenGl~r~-~l~r--------q~----Lq~-~~~~~~l~~S~vnsL~~D~dGsLWv~t~~giv~~~~a~w~~ma~i 325 (671)
T COG3292 260 LWIGTENGLWRT-RLPR--------QG----LQI-PLSKMHLGVSTVNSLWLDTDGSLWVGTYGGIVRYLTADWKRMAVI 325 (671)
T ss_pred EEEeecccceeE-ecCC--------CC----ccc-cccccCCccccccceeeccCCCEeeeccCceEEEecchhhheeee
Confidence 445655554332 2222 10 000 011111112345555555 55667777777766543321111111
Q ss_pred CccCCC--CceEEEEc--CCcEEEE-EcCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeC
Q psy12614 338 PCTLAQ--STPVSLAK--DIQHVLL-QYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVS 412 (708)
Q Consensus 338 ~~~~~~--~~~~~~s~--~~~~l~~-~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s 412 (708)
. .... ....+.+| .+..+-. ...+.+.+-+-.++. .+.....-....|+.+.+.
T Consensus 326 n-~~dG~v~~~~~~a~~ll~~~v~~~ns~g~L~van~stG~--------------------~v~sv~q~Rg~nit~~~~d 384 (671)
T COG3292 326 N-DSDGGVSQYEAVAPALLSWGVRQLNSIGELMVANGSTGE--------------------LVRSVHQLRGMNITTTLED 384 (671)
T ss_pred e-cCCCchhhhhccCchhcccceeeccccceEEEecCCCCc--------------------EEEEeeeccccccchhhhc
Confidence 1 0000 00111111 0000000 011112222222211 2222222333456666666
Q ss_pred CCCcEEEEEcCCceEEEEEEecCCcceeEEeecCCcccccceeEEEEEecCCCeEEEEecCCcEEEecCCCeEEEEEecC
Q psy12614 413 NDGKYVAYSTESCVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVLISADSTLLLAVSLNGPLYIIDLSSLEIKYCVDP 492 (708)
Q Consensus 413 ~~g~~l~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~~~~~dg~i~~~~~~~~~~~~~~~~ 492 (708)
.+|+.-+.+..+-+..|+-.+ .-..+....-++ ...|..+.=.|+++ |-.++.+|.+|..... .+....+..
T Consensus 385 ~~g~lWlgs~q~GLsrl~n~n--~~avlde~agl~----ss~V~aived~dns-LWIGTs~Glvk~~pe~-~~v~n~ln~ 456 (671)
T COG3292 385 SRGRLWLGSMQNGLSRLDNKN--EWAVLDEDAGLP----SSEVSAIVEDPDNS-LWIGTSGGLVKRDPES-GRVLNLLNP 456 (671)
T ss_pred cCCcEEEEecccchhhhccCC--cccccccccCCc----ccceeeeeecCCCC-EEEeccCCeEecCccc-cchhccccc
Confidence 655544444333344444432 111121111111 33555566678888 6668888875544221 122222221
Q ss_pred CCCCccCcceEEEEECCCCcEEEEEecCCeEEEEECC
Q psy12614 493 YKSNLMSDVISLVQMSECKQYIVCADRKSHVVIWKNG 529 (708)
Q Consensus 493 ~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~ 529 (708)
.......+.+..+.+.|+|++-+.++ + .|..|+-.
T Consensus 457 ~~~~l~~s~~~~lg~~~~g~Lw~a~g-~-gva~~~sq 491 (671)
T COG3292 457 GSHGLDGSRVEQLGLGPDGRLWLAAG-S-GVAAWESQ 491 (671)
T ss_pred ccCcCCcchhhhhccCCCCceEEEec-c-eeeeeccc
Confidence 11101144688899999998654432 3 34666665
|
|
| >PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2 | Back alignment and domain information |
|---|
Probab=97.17 E-value=0.19 Score=46.20 Aligned_cols=190 Identities=12% Similarity=0.114 Sum_probs=118.7
Q ss_pred CCcEEEEEEcCCCCEEEEEeCCC--cEEEEeCCCCCeEEEEEecCCCCCcEEEEEEeCCEEEEE-cCCCcEEEEECCCCe
Q psy12614 26 PKVINCIACEPKSSRLAVSRADQ--SIEIWDISETPHVDRVFIGDPLSNSIECLTWFNDRLFSG-GLQGFVNEYDMRRLN 102 (708)
Q Consensus 26 ~~~v~~~~~s~~~~~la~~~~dg--~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~~~~l~s~-~~d~~i~vwd~~~~~ 102 (708)
..-...+.|..+|.++-+.+.-| .|+.+|+.+++.+...--... --=..++..++.|.-- -.++...+||..+.+
T Consensus 44 ~aFTQGL~~~~~g~LyESTG~yG~S~l~~~d~~tg~~~~~~~l~~~--~FgEGit~~~d~l~qLTWk~~~~f~yd~~tl~ 121 (264)
T PF05096_consen 44 TAFTQGLEFLDDGTLYESTGLYGQSSLRKVDLETGKVLQSVPLPPR--YFGEGITILGDKLYQLTWKEGTGFVYDPNTLK 121 (264)
T ss_dssp T-EEEEEEEEETTEEEEEECSTTEEEEEEEETTTSSEEEEEE-TTT----EEEEEEETTEEEEEESSSSEEEEEETTTTE
T ss_pred cccCccEEecCCCEEEEeCCCCCcEEEEEEECCCCcEEEEEECCcc--ccceeEEEECCEEEEEEecCCeEEEEccccce
Confidence 34456788877887777765544 699999999987753333333 3445566665555544 478999999999999
Q ss_pred EeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEeccccc---ccEEEEEECCCCCEEEEecCC-eE
Q psy12614 103 IKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQ---GRILCTAWHSSGDYLVTGCAA-AV 178 (708)
Q Consensus 103 ~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~---~~v~~~~~s~d~~~l~~~~~d-~i 178 (708)
.+.++.-. +.=+.++ .|++.|+.......|+++|..+-+........... ..++-+.|. +|...|=.=.. .|
T Consensus 122 ~~~~~~y~-~EGWGLt--~dg~~Li~SDGS~~L~~~dP~~f~~~~~i~V~~~g~pv~~LNELE~i-~G~IyANVW~td~I 197 (264)
T PF05096_consen 122 KIGTFPYP-GEGWGLT--SDGKRLIMSDGSSRLYFLDPETFKEVRTIQVTDNGRPVSNLNELEYI-NGKIYANVWQTDRI 197 (264)
T ss_dssp EEEEEE-S-SS--EEE--ECSSCEEEE-SSSEEEEE-TTT-SEEEEEE-EETTEE---EEEEEEE-TTEEEEEETTSSEE
T ss_pred EEEEEecC-CcceEEE--cCCCEEEEECCccceEEECCcccceEEEEEEEECCEECCCcEeEEEE-cCEEEEEeCCCCeE
Confidence 88888643 4556666 56777877777788999998877665333333222 345567775 56555544444 89
Q ss_pred EEEEcCCCceEEEEEeccc--------CCCCCceeEEEEEEccCC-E-EEEEc
Q psy12614 179 RVWDIHKGHAIHKMSLDKS--------SKFSKNTAVWCVAFCADF-T-IITGD 221 (708)
Q Consensus 179 ~iwd~~~~~~~~~~~~~~~--------~~~~~~~~v~~~~~~~~~-~-l~~~~ 221 (708)
...|..+|+....+....- .........+.+|+.|+. + +++|-
T Consensus 198 ~~Idp~tG~V~~~iDls~L~~~~~~~~~~~~~~dVLNGIAyd~~~~~l~vTGK 250 (264)
T PF05096_consen 198 VRIDPETGKVVGWIDLSGLRPEVGRDKSRQPDDDVLNGIAYDPETDRLFVTGK 250 (264)
T ss_dssp EEEETTT-BEEEEEE-HHHHHHHTSTTST--TTS-EEEEEEETTTTEEEEEET
T ss_pred EEEeCCCCeEEEEEEhhHhhhcccccccccccCCeeEeEeEeCCCCEEEEEeC
Confidence 9999999999988865320 000124678999998876 4 45553
|
3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X. |
| >PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation | Back alignment and domain information |
|---|
Probab=97.16 E-value=0.13 Score=48.32 Aligned_cols=155 Identities=15% Similarity=0.041 Sum_probs=93.0
Q ss_pred ceEEEEeCCCCcEEEEEc--CCceEEEEEEecCCcceeEEeecCCcccccceeEEEEEecCCCeEEEEecCCc--EEE-e
Q psy12614 405 TIRCSVVSNDGKYVAYST--ESCVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVLISADSTLLLAVSLNGP--LYI-I 479 (708)
Q Consensus 405 ~i~~~~~s~~g~~l~~~~--d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~~~~~dg~--i~~-~ 479 (708)
.+.+.++++||+.+|+-. ++.-.+|-...+.....+ +.+ ..++...|++++...++...+.. ++. .
T Consensus 25 ~~~s~AvS~dg~~~A~v~~~~~~~~L~~~~~~~~~~~~-----~~g----~~l~~PS~d~~g~~W~v~~~~~~~~~~~~~ 95 (253)
T PF10647_consen 25 DVTSPAVSPDGSRVAAVSEGDGGRSLYVGPAGGPVRPV-----LTG----GSLTRPSWDPDGWVWTVDDGSGGVRVVRDS 95 (253)
T ss_pred cccceEECCCCCeEEEEEEcCCCCEEEEEcCCCcceee-----ccC----CccccccccCCCCEEEEEcCCCceEEEEec
Confidence 678899999999888733 555566665543322111 111 14445799999887776664444 332 1
Q ss_pred cCCCeEEEEEecCCCCCccCcceEEEEECCCCcEEEEEe---cCCeEEEEECC---ce--------eeecCCCCCCceEE
Q psy12614 480 DLSSLEIKYCVDPYKSNLMSDVISLVQMSECKQYIVCAD---RKSHVVIWKNG---QH--------HASLPRYRKPSTAM 545 (708)
Q Consensus 480 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~---~d~~i~iw~~~---~~--------~~~~~~~~~~v~~l 545 (708)
..+.... ..+..... ...|+.+.+||||..+|... .++.|.+--+. .. ..........++.+
T Consensus 96 ~~g~~~~-~~v~~~~~---~~~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V~r~~~g~~~~l~~~~~~~~~~~~~v~~v 171 (253)
T PF10647_consen 96 ASGTGEP-VEVDWPGL---RGRITALRVSPDGTRVAVVVEDGGGGRVYVAGVVRDGDGVPRRLTGPRRVAPPLLSDVTDV 171 (253)
T ss_pred CCCccee-EEeccccc---CCceEEEEECCCCcEEEEEEecCCCCeEEEEEEEeCCCCCcceeccceEecccccCcceee
Confidence 2222221 22222211 22799999999999998876 35788877665 11 11222345689999
Q ss_pred EEcCCCCEEEEEecCCc-EEE-EEcCCCC
Q psy12614 546 AIHPTLSTLVTVYSDHR-IVE-FDLNRKA 572 (708)
Q Consensus 546 ~~s~d~~~l~~~~~dg~-i~v-wd~~~~~ 572 (708)
+|.+++.+++.+...+. +.. .....+.
T Consensus 172 ~W~~~~~L~V~~~~~~~~~~~~v~~dG~~ 200 (253)
T PF10647_consen 172 AWSDDSTLVVLGRSAGGPVVRLVSVDGGP 200 (253)
T ss_pred eecCCCEEEEEeCCCCCceeEEEEccCCc
Confidence 99999988777655433 333 4444443
|
It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues. |
| >KOG4441|consensus | Back alignment and domain information |
|---|
Probab=97.16 E-value=0.062 Score=56.95 Aligned_cols=228 Identities=14% Similarity=0.152 Sum_probs=124.2
Q ss_pred cCCCCEEEEEeCCC------cEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe-CCEEEEEcCC------CcEEEEECCCC
Q psy12614 35 EPKSSRLAVSRADQ------SIEIWDISETPHVDRVFIGDPLSNSIECLTWF-NDRLFSGGLQ------GFVNEYDMRRL 101 (708)
Q Consensus 35 s~~~~~la~~~~dg------~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~-~~~l~s~~~d------~~i~vwd~~~~ 101 (708)
+..+.++++|+.++ .+..||..++......-.... ..-.+++.. +...++||.| .++..||..+.
T Consensus 282 ~~~~~l~~vGG~~~~~~~~~~ve~yd~~~~~w~~~a~m~~~--r~~~~~~~~~~~lYv~GG~~~~~~~l~~ve~YD~~~~ 359 (571)
T KOG4441|consen 282 SVSGKLVAVGGYNRQGQSLRSVECYDPKTNEWSSLAPMPSP--RCRVGVAVLNGKLYVVGGYDSGSDRLSSVERYDPRTN 359 (571)
T ss_pred CCCCeEEEECCCCCCCcccceeEEecCCcCcEeecCCCCcc--cccccEEEECCEEEEEccccCCCcccceEEEecCCCC
Confidence 44466777877763 588999998744321111222 455666666 7777888888 35677777766
Q ss_pred eEeEEEeecCCceEEEE-EecCCCEEEEEeCCCc-----EEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecC
Q psy12614 102 NIKSSTAVTSGTCWCLS-VHKKKRLLAAGTEQGH-----INLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCA 175 (708)
Q Consensus 102 ~~~~~~~~~~~~v~~~~-~s~~~~~la~~~~d~~-----i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~ 175 (708)
+-.. +......-...+ -.-+|...|+|+.||. +..||..+.+..............-... -+|...++|+.
T Consensus 360 ~W~~-~a~M~~~R~~~~v~~l~g~iYavGG~dg~~~l~svE~YDp~~~~W~~va~m~~~r~~~gv~~--~~g~iYi~GG~ 436 (571)
T KOG4441|consen 360 QWTP-VAPMNTKRSDFGVAVLDGKLYAVGGFDGEKSLNSVECYDPVTNKWTPVAPMLTRRSGHGVAV--LGGKLYIIGGG 436 (571)
T ss_pred ceec-cCCccCccccceeEEECCEEEEEeccccccccccEEEecCCCCcccccCCCCcceeeeEEEE--ECCEEEEEcCc
Confidence 5222 111111111111 1226777888888864 7888988887753332322112222222 24666666663
Q ss_pred C-------eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEEEEcCCCc-----EEEEeCCCCeeEEE--ee
Q psy12614 176 A-------AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGF-----VRFWDGKTGVQWSD--VK 241 (708)
Q Consensus 176 d-------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~-----i~~wd~~~~~~~~~--~~ 241 (708)
+ .+..||..+++-...-.... ...-..++...+.-++.|+.++. |-.||..+.+-... +.
T Consensus 437 ~~~~~~l~sve~YDP~t~~W~~~~~M~~------~R~~~g~a~~~~~iYvvGG~~~~~~~~~VE~ydp~~~~W~~v~~m~ 510 (571)
T KOG4441|consen 437 DGSSNCLNSVECYDPETNTWTLIAPMNT------RRSGFGVAVLNGKIYVVGGFDGTSALSSVERYDPETNQWTMVAPMT 510 (571)
T ss_pred CCCccccceEEEEcCCCCceeecCCccc------ccccceEEEECCEEEEECCccCCCccceEEEEcCCCCceeEcccCc
Confidence 3 47889988766443332221 11122244443334778887763 67788877654332 22
Q ss_pred ccccCeEEEEEeCCCCEEEEEecCC-----eEEEEEccC
Q psy12614 242 THKKDILALTVSEDENYLYCAGVDP-----TVVCFQRTR 275 (708)
Q Consensus 242 ~~~~~i~~~~~s~~~~~l~~~~~dg-----~i~iw~~~~ 275 (708)
.....+.... -++...++|+.|| ++..||..+
T Consensus 511 ~~rs~~g~~~--~~~~ly~vGG~~~~~~l~~ve~ydp~~ 547 (571)
T KOG4441|consen 511 SPRSAVGVVV--LGGKLYAVGGFDGNNNLNTVECYDPET 547 (571)
T ss_pred cccccccEEE--ECCEEEEEecccCccccceeEEcCCCC
Confidence 2222222222 2455667777775 567777666
|
|
| >PRK13684 Ycf48-like protein; Provisional | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.3 Score=48.17 Aligned_cols=277 Identities=10% Similarity=0.019 Sum_probs=136.7
Q ss_pred ceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCeeEEEee----ccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCc
Q psy12614 203 NTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDVK----THKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKP 277 (708)
Q Consensus 203 ~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~~----~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~ 277 (708)
...+.+++|..+.+ +++|. +|.|..= .+.|+.-.... .....+.++.|.++ ..++ ++..+.| |...+
T Consensus 45 ~~~l~~v~F~d~~~g~avG~-~G~il~T-~DgG~tW~~~~~~~~~~~~~l~~v~~~~~-~~~~-~G~~g~i--~~S~D-- 116 (334)
T PRK13684 45 EANLLDIAFTDPNHGWLVGS-NRTLLET-NDGGETWEERSLDLPEENFRLISISFKGD-EGWI-VGQPSLL--LHTTD-- 116 (334)
T ss_pred CCceEEEEEeCCCcEEEEEC-CCEEEEE-cCCCCCceECccCCcccccceeeeEEcCC-cEEE-eCCCceE--EEECC--
Confidence 55788899986666 55554 4544321 12232222211 12234677777654 3333 3445543 32332
Q ss_pred ccccCCCCCCCCcceEEeEEEeccccceEEEE-EeCCEEEEEcCCCeEEEEeCCCCceeecCcc-CCCCceEEEEcCCcE
Q psy12614 278 QVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLA-LHGNRLYSGGLDSYLSLSYYPPKTLVKYPCT-LAQSTPVSLAKDIQH 355 (708)
Q Consensus 278 ~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~-~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~-~~~~~~~~~s~~~~~ 355 (708)
+ -..|...............+. ..+..+..++..|.|..-+=.......+... ......+.+.+++.+
T Consensus 117 ------g----G~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~G~i~~S~DgG~tW~~~~~~~~g~~~~i~~~~~g~~ 186 (334)
T PRK13684 117 ------G----GKNWTRIPLSEKLPGSPYLITALGPGTAEMATNVGAIYRTTDGGKNWEALVEDAAGVVRNLRRSPDGKY 186 (334)
T ss_pred ------C----CCCCeEccCCcCCCCCceEEEEECCCcceeeeccceEEEECCCCCCceeCcCCCcceEEEEEECCCCeE
Confidence 1 134543321101111122222 2233333444555543322222333333311 223456778899988
Q ss_pred EEEEcCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEEEcCCceEEEEEEecC
Q psy12614 356 VLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYSTESCVRLHSLDLDG 435 (708)
Q Consensus 356 l~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~d~~i~i~~~~~~~ 435 (708)
++++..+.+..-....++ .-..........+.++++.++++.++++..|.+.+=..+.
T Consensus 187 v~~g~~G~i~~s~~~gg~--------------------tW~~~~~~~~~~l~~i~~~~~g~~~~vg~~G~~~~~s~d~-- 244 (334)
T PRK13684 187 VAVSSRGNFYSTWEPGQT--------------------AWTPHQRNSSRRLQSMGFQPDGNLWMLARGGQIRFNDPDD-- 244 (334)
T ss_pred EEEeCCceEEEEcCCCCC--------------------eEEEeeCCCcccceeeeEcCCCCEEEEecCCEEEEccCCC--
Confidence 888877765432111111 1222333445678899999999998888888764321221
Q ss_pred CcceeEEeecCCcccccceeEEEEEecCCCeEEEEecCCc-EEEecCCCeEEEEEecCCCCCccCcceEEEEECCCCcEE
Q psy12614 436 DKPQISRIKNLPAPLFKSIFTHVLISADSTLLLAVSLNGP-LYIIDLSSLEIKYCVDPYKSNLMSDVISLVQMSECKQYI 514 (708)
Q Consensus 436 ~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~~~~~dg~-i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l 514 (708)
+. .++.+. .+.......+..+++.+++..++ ++.+|. +...+.+ +.-.......+. ......+.|..+++.+
T Consensus 245 G~-sW~~~~-~~~~~~~~~l~~v~~~~~~~~~~-~G~~G~v~~S~d~G--~tW~~~~~~~~~--~~~~~~~~~~~~~~~~ 317 (334)
T PRK13684 245 LE-SWSKPI-IPEITNGYGYLDLAYRTPGEIWA-GGGNGTLLVSKDGG--KTWEKDPVGEEV--PSNFYKIVFLDPEKGF 317 (334)
T ss_pred CC-cccccc-CCccccccceeeEEEcCCCCEEE-EcCCCeEEEeCCCC--CCCeECCcCCCC--CcceEEEEEeCCCceE
Confidence 21 232211 22111123466689999887665 445666 4444433 222222211122 3467788888777777
Q ss_pred EEEecCCeEEEEE
Q psy12614 515 VCADRKSHVVIWK 527 (708)
Q Consensus 515 ~~~~~d~~i~iw~ 527 (708)
++| ..|.|--|+
T Consensus 318 ~~G-~~G~il~~~ 329 (334)
T PRK13684 318 VLG-QRGVLLRYV 329 (334)
T ss_pred EEC-CCceEEEec
Confidence 766 678877665
|
|
| >KOG2395|consensus | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.0073 Score=59.43 Aligned_cols=148 Identities=17% Similarity=0.242 Sum_probs=100.1
Q ss_pred cCCCEEE-EEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCE--E-----EEecCC-eEEEEEcCCCceEEE
Q psy12614 121 KKKRLLA-AGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDY--L-----VTGCAA-AVRVWDIHKGHAIHK 191 (708)
Q Consensus 121 ~~~~~la-~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~--l-----~~~~~d-~i~iwd~~~~~~~~~ 191 (708)
.+.++|. .+.....++-.|++.|+++....+ +.. |.-+.+.|+.+. | +.|-.+ .|.-||.+-... ..
T Consensus 343 ~dsnlil~~~~~~~~l~klDIE~GKIVeEWk~--~~d-i~mv~~t~d~K~~Ql~~e~TlvGLs~n~vfriDpRv~~~-~k 418 (644)
T KOG2395|consen 343 ADSNLILMDGGEQDKLYKLDIERGKIVEEWKF--EDD-INMVDITPDFKFAQLTSEQTLVGLSDNSVFRIDPRVQGK-NK 418 (644)
T ss_pred cccceEeeCCCCcCcceeeecccceeeeEeec--cCC-cceeeccCCcchhcccccccEEeecCCceEEecccccCc-ce
Confidence 3444444 455556788999999999843333 333 777788887531 1 233344 899999873222 11
Q ss_pred EEecccCCCCCceeEEEEEEccCCEEEEEcCCCcEEEEeCCCCee-EEEeeccccCeEEEEEeCCCCEEEEEecCCeEEE
Q psy12614 192 MSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQ-WSDVKTHKKDILALTVSEDENYLYCAGVDPTVVC 270 (708)
Q Consensus 192 ~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~-~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i 270 (708)
+.......|.......|.+-..+|.+++|+.+|.|++||- .+.. ...+++...+|..+..+.||++|++.+ +..+.+
T Consensus 419 l~~~q~kqy~~k~nFsc~aTT~sG~IvvgS~~GdIRLYdr-i~~~AKTAlPgLG~~I~hVdvtadGKwil~Tc-~tyLlL 496 (644)
T KOG2395|consen 419 LAVVQSKQYSTKNNFSCFATTESGYIVVGSLKGDIRLYDR-IGRRAKTALPGLGDAIKHVDVTADGKWILATC-KTYLLL 496 (644)
T ss_pred eeeeeccccccccccceeeecCCceEEEeecCCcEEeehh-hhhhhhhcccccCCceeeEEeeccCcEEEEec-ccEEEE
Confidence 2222111223356677888888999999999999999996 5544 445788899999999999999988766 456666
Q ss_pred EEcc
Q psy12614 271 FQRT 274 (708)
Q Consensus 271 w~~~ 274 (708)
.+..
T Consensus 497 i~t~ 500 (644)
T KOG2395|consen 497 IDTL 500 (644)
T ss_pred EEEe
Confidence 6554
|
|
| >PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.059 Score=41.82 Aligned_cols=100 Identities=16% Similarity=0.109 Sum_probs=69.6
Q ss_pred eEEEEEec---CC-CeEEEEecCCcEEEecCCCeEEEEEecCCCCCccCcceEEEEECCCCcEEEEEecCCeEEEEECCc
Q psy12614 455 FTHVLISA---DS-TLLLAVSLNGPLYIIDLSSLEIKYCVDPYKSNLMSDVISLVQMSECKQYIVCADRKSHVVIWKNGQ 530 (708)
Q Consensus 455 i~~~~~s~---d~-~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~ 530 (708)
|+++++.. || ..|++|+.|..|..++.. +.+..+.. ...|+.++-... ..++.+..+|+|-+|+-..
T Consensus 2 V~al~~~d~d~dg~~eLlvGs~D~~IRvf~~~--e~~~Ei~e------~~~v~~L~~~~~-~~F~Y~l~NGTVGvY~~~~ 72 (111)
T PF14783_consen 2 VTALCLFDFDGDGENELLVGSDDFEIRVFKGD--EIVAEITE------TDKVTSLCSLGG-GRFAYALANGTVGVYDRSQ 72 (111)
T ss_pred eeEEEEEecCCCCcceEEEecCCcEEEEEeCC--cEEEEEec------ccceEEEEEcCC-CEEEEEecCCEEEEEeCcc
Confidence 34455543 43 578889999886666655 56666654 557888887766 5688888999999999987
Q ss_pred eeeecCCCCCCceEEEEcC-C--C-CEEEEEecCCcEE
Q psy12614 531 HHASLPRYRKPSTAMAIHP-T--L-STLVTVYSDHRIV 564 (708)
Q Consensus 531 ~~~~~~~~~~~v~~l~~s~-d--~-~~l~~~~~dg~i~ 564 (708)
..+..+.-.. ++++++.. + | .-|++|-.+|.|-
T Consensus 73 RlWRiKSK~~-~~~~~~~D~~gdG~~eLI~GwsnGkve 109 (111)
T PF14783_consen 73 RLWRIKSKNQ-VTSMAFYDINGDGVPELIVGWSNGKVE 109 (111)
T ss_pred eeeeeccCCC-eEEEEEEcCCCCCceEEEEEecCCeEE
Confidence 7776665444 66666543 2 2 2588888888764
|
|
| >PRK13684 Ycf48-like protein; Provisional | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.35 Score=47.74 Aligned_cols=274 Identities=14% Similarity=0.155 Sum_probs=138.4
Q ss_pred CCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCC-CCeEEEE-Ee--cCCCCCcEEEEEEeCCEEEEEcCCCcEEEEECC
Q psy12614 24 PEPKVINCIACEPKSSRLAVSRADQSIEIWDISE-TPHVDRV-FI--GDPLSNSIECLTWFNDRLFSGGLQGFVNEYDMR 99 (708)
Q Consensus 24 ~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~-~~~~~~~-~~--~h~~~~~v~~l~~~~~~l~s~~~d~~i~vwd~~ 99 (708)
+-...+.+++|..+.+-+|+|. +|.| |...+ |+.=... .. ... ..+.++.|.++....++..+.|..- -+
T Consensus 43 ~~~~~l~~v~F~d~~~g~avG~-~G~i--l~T~DgG~tW~~~~~~~~~~~--~~l~~v~~~~~~~~~~G~~g~i~~S-~D 116 (334)
T PRK13684 43 PTEANLLDIAFTDPNHGWLVGS-NRTL--LETNDGGETWEERSLDLPEEN--FRLISISFKGDEGWIVGQPSLLLHT-TD 116 (334)
T ss_pred CCCCceEEEEEeCCCcEEEEEC-CCEE--EEEcCCCCCceECccCCcccc--cceeeeEEcCCcEEEeCCCceEEEE-CC
Confidence 3356899999987667677775 4433 32222 2211111 11 112 4577888873323334455543332 12
Q ss_pred CCeEeEEEe---ecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC
Q psy12614 100 RLNIKSSTA---VTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA 176 (708)
Q Consensus 100 ~~~~~~~~~---~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d 176 (708)
.|+.=..+. ...+....+....++..+++ +..|.|.. ...+-...........+.+.++.+.|++.+++++...
T Consensus 117 gG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~-g~~G~i~~--S~DgG~tW~~~~~~~~g~~~~i~~~~~g~~v~~g~~G 193 (334)
T PRK13684 117 GGKNWTRIPLSEKLPGSPYLITALGPGTAEMA-TNVGAIYR--TTDGGKNWEALVEDAAGVVRNLRRSPDGKYVAVSSRG 193 (334)
T ss_pred CCCCCeEccCCcCCCCCceEEEEECCCcceee-eccceEEE--ECCCCCCceeCcCCCcceEEEEEECCCCeEEEEeCCc
Confidence 222111111 01111222222222333333 44454432 2222111112233335678999999999888877777
Q ss_pred -eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEEEEcCCCcEEEEeCCCCeeEEEeec----cccCeEEEE
Q psy12614 177 -AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVKT----HKKDILALT 251 (708)
Q Consensus 177 -~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~----~~~~i~~~~ 251 (708)
..+.++ ..++........ ....++++.+.++++++..+..|.+.+=....|..-..... ....+..+.
T Consensus 194 ~i~~s~~-~gg~tW~~~~~~------~~~~l~~i~~~~~g~~~~vg~~G~~~~~s~d~G~sW~~~~~~~~~~~~~l~~v~ 266 (334)
T PRK13684 194 NFYSTWE-PGQTAWTPHQRN------SSRRLQSMGFQPDGNLWMLARGGQIRFNDPDDLESWSKPIIPEITNGYGYLDLA 266 (334)
T ss_pred eEEEEcC-CCCCeEEEeeCC------CcccceeeeEcCCCCEEEEecCCEEEEccCCCCCccccccCCccccccceeeEE
Confidence 444333 223333333322 26778999999999866667778765433444443332221 123577889
Q ss_pred EeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe-CCEEEEEcCCCeEEEEe
Q psy12614 252 VSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH-GNRLYSGGLDSYLSLSY 328 (708)
Q Consensus 252 ~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~-~~~l~s~~~d~~i~iw~ 328 (708)
+.+++..++ ++.+|.+. ..... |+ .|........-......+.+. ++..+..+..|.|..++
T Consensus 267 ~~~~~~~~~-~G~~G~v~-~S~d~--------G~-----tW~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~G~il~~~ 329 (334)
T PRK13684 267 YRTPGEIWA-GGGNGTLL-VSKDG--------GK-----TWEKDPVGEEVPSNFYKIVFLDPEKGFVLGQRGVLLRYV 329 (334)
T ss_pred EcCCCCEEE-EcCCCeEE-EeCCC--------CC-----CCeECCcCCCCCcceEEEEEeCCCceEEECCCceEEEec
Confidence 998876554 55567554 33443 32 343322111222356666666 66666677778876654
|
|
| >PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.0028 Score=40.65 Aligned_cols=32 Identities=16% Similarity=0.465 Sum_probs=29.3
Q ss_pred CCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCC
Q psy12614 25 EPKVINCIACEPKSSRLAVSRADQSIEIWDIS 56 (708)
Q Consensus 25 h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~ 56 (708)
.+..|.+++|+|...+||.|+.+|.|.|+.+.
T Consensus 10 l~~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl~ 41 (47)
T PF12894_consen 10 LPSRVSCMSWCPTMDLIALGTEDGEVLVYRLN 41 (47)
T ss_pred CCCcEEEEEECCCCCEEEEEECCCeEEEEECC
Confidence 35679999999999999999999999999983
|
|
| >KOG4441|consensus | Back alignment and domain information |
|---|
Probab=96.97 E-value=0.12 Score=54.99 Aligned_cols=231 Identities=14% Similarity=0.136 Sum_probs=126.7
Q ss_pred CCEEEEEcCC------CcEEEEECCCCeEeEEEee-cCCceEEEEEecCCCEEEEEeCC------CcEEEEEccCCcEEE
Q psy12614 81 NDRLFSGGLQ------GFVNEYDMRRLNIKSSTAV-TSGTCWCLSVHKKKRLLAAGTEQ------GHINLFQISDEGLLY 147 (708)
Q Consensus 81 ~~~l~s~~~d------~~i~vwd~~~~~~~~~~~~-~~~~v~~~~~s~~~~~la~~~~d------~~i~iwd~~~~~~~~ 147 (708)
+..++.||.+ ..+..+|..++.-...-.- ....-.++++. ++...++|+.| .++..||..+++...
T Consensus 285 ~~l~~vGG~~~~~~~~~~ve~yd~~~~~w~~~a~m~~~r~~~~~~~~-~~~lYv~GG~~~~~~~l~~ve~YD~~~~~W~~ 363 (571)
T KOG4441|consen 285 GKLVAVGGYNRQGQSLRSVECYDPKTNEWSSLAPMPSPRCRVGVAVL-NGKLYVVGGYDSGSDRLSSVERYDPRTNQWTP 363 (571)
T ss_pred CeEEEECCCCCCCcccceeEEecCCcCcEeecCCCCcccccccEEEE-CCEEEEEccccCCCcccceEEEecCCCCceec
Confidence 5566667666 3577888888743322221 12222334443 45677888888 357889988888653
Q ss_pred EEecccccccEEEEEECCCCCEEEEecCC------eEEEEEcCCCceEEEEEecccCCCCCceeEEEEE-EccCCE-EEE
Q psy12614 148 EKLLDRQQGRILCTAWHSSGDYLVTGCAA------AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVA-FCADFT-IIT 219 (708)
Q Consensus 148 ~~~~~~~~~~v~~~~~s~d~~~l~~~~~d------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~-l~~ 219 (708)
...+........... -+|...|+|+.| ++..||..+.+-...-... ......+ ..-+|+ .++
T Consensus 364 ~a~M~~~R~~~~v~~--l~g~iYavGG~dg~~~l~svE~YDp~~~~W~~va~m~--------~~r~~~gv~~~~g~iYi~ 433 (571)
T KOG4441|consen 364 VAPMNTKRSDFGVAV--LDGKLYAVGGFDGEKSLNSVECYDPVTNKWTPVAPML--------TRRSGHGVAVLGGKLYII 433 (571)
T ss_pred cCCccCccccceeEE--ECCEEEEEeccccccccccEEEecCCCCcccccCCCC--------cceeeeEEEEECCEEEEE
Confidence 222222111111111 256666777765 3778887765432222111 1111111 122565 667
Q ss_pred EcCCC------cEEEEeCCCCeeEE--EeeccccCeEEEEEeCCCCEEEEEecCC-----eEEEEEccCCcccccCCCCC
Q psy12614 220 GDSGG------FVRFWDGKTGVQWS--DVKTHKKDILALTVSEDENYLYCAGVDP-----TVVCFQRTRKPQVCSTSGPE 286 (708)
Q Consensus 220 ~~~dg------~i~~wd~~~~~~~~--~~~~~~~~i~~~~~s~~~~~l~~~~~dg-----~i~iw~~~~~~~~~~~~g~~ 286 (708)
|+.++ .+..||..+++-.. .+........ ++. -++...+.||.|+ .+..||..+
T Consensus 434 GG~~~~~~~l~sve~YDP~t~~W~~~~~M~~~R~~~g-~a~-~~~~iYvvGG~~~~~~~~~VE~ydp~~----------- 500 (571)
T KOG4441|consen 434 GGGDGSSNCLNSVECYDPETNTWTLIAPMNTRRSGFG-VAV-LNGKIYVVGGFDGTSALSSVERYDPET----------- 500 (571)
T ss_pred cCcCCCccccceEEEEcCCCCceeecCCcccccccce-EEE-ECCEEEEECCccCCCccceEEEEcCCC-----------
Confidence 77543 57788887765332 2221112222 222 3566777788776 367788776
Q ss_pred CCCcceEEeEEEeccccceEEEEEeCCEEEEEcCCC-----eEEEEeCCCCceeecC
Q psy12614 287 QGSSVWVRSVNRVIHEGDVKSLALHGNRLYSGGLDS-----YLSLSYYPPKTLVKYP 338 (708)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~s~~~d~-----~i~iw~~~~~~~~~~~ 338 (708)
.+|.....+......+......+...+.|+.|+ ++..||..+.......
T Consensus 501 ---~~W~~v~~m~~~rs~~g~~~~~~~ly~vGG~~~~~~l~~ve~ydp~~d~W~~~~ 554 (571)
T KOG4441|consen 501 ---NQWTMVAPMTSPRSAVGVVVLGGKLYAVGGFDGNNNLNTVECYDPETDTWTEVT 554 (571)
T ss_pred ---CceeEcccCccccccccEEEECCEEEEEecccCccccceeEEcCCCCCceeeCC
Confidence 457766555555555555555588888888887 5666776666544433
|
|
| >PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=96.97 E-value=0.57 Score=48.24 Aligned_cols=155 Identities=12% Similarity=0.150 Sum_probs=86.1
Q ss_pred eEEEEEecCCCEEEEE-eCCC----cEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecC-----------C-
Q psy12614 114 CWCLSVHKKKRLLAAG-TEQG----HINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCA-----------A- 176 (708)
Q Consensus 114 v~~~~~s~~~~~la~~-~~d~----~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~-----------d- 176 (708)
+..+++||||+++|.+ +..| .++++|+++++.+.. .+... ....+.|.+|++.|+.... .
T Consensus 126 ~~~~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg~~l~d-~i~~~--~~~~~~W~~d~~~~~y~~~~~~~~~~~~~~~~ 202 (414)
T PF02897_consen 126 LGGFSVSPDGKRLAYSLSDGGSEWYTLRVFDLETGKFLPD-GIENP--KFSSVSWSDDGKGFFYTRFDEDQRTSDSGYPR 202 (414)
T ss_dssp EEEEEETTTSSEEEEEEEETTSSEEEEEEEETTTTEEEEE-EEEEE--ESEEEEECTTSSEEEEEECSTTTSS-CCGCCE
T ss_pred eeeeeECCCCCEEEEEecCCCCceEEEEEEECCCCcCcCC-ccccc--ccceEEEeCCCCEEEEEEeCcccccccCCCCc
Confidence 3467899999999875 3333 499999999977632 22221 1223999999988765532 3
Q ss_pred eEEEEEcCCCceEEEEEecccCCCCCcee-EEEEEEccCCE--EEEEcC--C-CcEEEEeCCCC----eeEEEeeccccC
Q psy12614 177 AVRVWDIHKGHAIHKMSLDKSSKFSKNTA-VWCVAFCADFT--IITGDS--G-GFVRFWDGKTG----VQWSDVKTHKKD 246 (708)
Q Consensus 177 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~--l~~~~~--d-g~i~~wd~~~~----~~~~~~~~~~~~ 246 (708)
.|..|.+.+......+.... ..... ...+..++|++ ++.... + ..+.+.++..+ .....+......
T Consensus 203 ~v~~~~~gt~~~~d~lvfe~----~~~~~~~~~~~~s~d~~~l~i~~~~~~~~s~v~~~d~~~~~~~~~~~~~l~~~~~~ 278 (414)
T PF02897_consen 203 QVYRHKLGTPQSEDELVFEE----PDEPFWFVSVSRSKDGRYLFISSSSGTSESEVYLLDLDDGGSPDAKPKLLSPREDG 278 (414)
T ss_dssp EEEEEETTS-GGG-EEEEC-----TTCTTSEEEEEE-TTSSEEEEEEESSSSEEEEEEEECCCTTTSS-SEEEEEESSSS
T ss_pred EEEEEECCCChHhCeeEEee----cCCCcEEEEEEecCcccEEEEEEEccccCCeEEEEeccccCCCcCCcEEEeCCCCc
Confidence 58889887765442222221 11222 66788899996 332332 2 45888888774 233333333344
Q ss_pred eEEEEEeCCCCEEEEEec---CCeEEEEEccC
Q psy12614 247 ILALTVSEDENYLYCAGV---DPTVVCFQRTR 275 (708)
Q Consensus 247 i~~~~~s~~~~~l~~~~~---dg~i~iw~~~~ 275 (708)
+....-...+.+++.... .+.|...++..
T Consensus 279 ~~~~v~~~~~~~yi~Tn~~a~~~~l~~~~l~~ 310 (414)
T PF02897_consen 279 VEYYVDHHGDRLYILTNDDAPNGRLVAVDLAD 310 (414)
T ss_dssp -EEEEEEETTEEEEEE-TT-TT-EEEEEETTS
T ss_pred eEEEEEccCCEEEEeeCCCCCCcEEEEecccc
Confidence 433333334434443322 24666666665
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A .... |
| >PF14727 PHTB1_N: PTHB1 N-terminus | Back alignment and domain information |
|---|
Probab=96.97 E-value=0.5 Score=47.44 Aligned_cols=143 Identities=13% Similarity=0.134 Sum_probs=88.0
Q ss_pred CCEEEEEeCCCcEEEEeCCCCCeE-EEEEecCCCCCcEEEEEEe------CCEEEEEcCCCcEEEEECCC--Ce------
Q psy12614 38 SSRLAVSRADQSIEIWDISETPHV-DRVFIGDPLSNSIECLTWF------NDRLFSGGLQGFVNEYDMRR--LN------ 102 (708)
Q Consensus 38 ~~~la~~~~dg~v~iwd~~~~~~~-~~~~~~h~~~~~v~~l~~~------~~~l~s~~~d~~i~vwd~~~--~~------ 102 (708)
...+++|+.+|.++||+...+... ...+-...+..+|..|..- ....++.-.-..+.+|.+.. |.
T Consensus 37 ~d~IivGS~~G~LrIy~P~~~~~~~~~lllE~~l~~PILqv~~G~F~s~~~~~~LaVLhP~kl~vY~v~~~~g~~~~g~~ 116 (418)
T PF14727_consen 37 SDKIIVGSYSGILRIYDPSGNEFQPEDLLLETQLKDPILQVECGKFVSGSEDLQLAVLHPRKLSVYSVSLVDGTVEHGNQ 116 (418)
T ss_pred ccEEEEeccccEEEEEccCCCCCCCccEEEEEecCCcEEEEEeccccCCCCcceEEEecCCEEEEEEEEecCCCcccCcE
Confidence 468999999999999999764421 1122222335788888765 23333445667788887622 11
Q ss_pred -EeEEEeecC--CceEEEEEec----C-CCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEec
Q psy12614 103 -IKSSTAVTS--GTCWCLSVHK----K-KRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGC 174 (708)
Q Consensus 103 -~~~~~~~~~--~~v~~~~~s~----~-~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~ 174 (708)
.+..+-.|. .....++.-| . ..++.+-+-||.+.+++-+.-... ..+.. ---...++|.+..+.+++++
T Consensus 117 ~~L~~~yeh~l~~~a~nm~~G~Fgg~~~~~~IcVQS~DG~L~~feqe~~~f~--~~lp~-~llPgPl~Y~~~tDsfvt~s 193 (418)
T PF14727_consen 117 YQLELIYEHSLQRTAYNMCCGPFGGVKGRDFICVQSMDGSLSFFEQESFAFS--RFLPD-FLLPGPLCYCPRTDSFVTAS 193 (418)
T ss_pred EEEEEEEEEecccceeEEEEEECCCCCCceEEEEEecCceEEEEeCCcEEEE--EEcCC-CCCCcCeEEeecCCEEEEec
Confidence 222222332 2233344333 2 357788899999999987654433 44433 22234567888888899999
Q ss_pred CC-eEEEEEc
Q psy12614 175 AA-AVRVWDI 183 (708)
Q Consensus 175 ~d-~i~iwd~ 183 (708)
.+ .+..|..
T Consensus 194 ss~~l~~Yky 203 (418)
T PF14727_consen 194 SSWTLECYKY 203 (418)
T ss_pred CceeEEEecH
Confidence 88 8888875
|
|
| >PHA02713 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.1 Score=55.58 Aligned_cols=221 Identities=7% Similarity=0.045 Sum_probs=112.1
Q ss_pred cEEEEECCCCeEeE--EEeecCCceEEEEEecCCCEEEEEeCC------CcEEEEEccCCcEEEEEecccccccEEEEEE
Q psy12614 92 FVNEYDMRRLNIKS--STAVTSGTCWCLSVHKKKRLLAAGTEQ------GHINLFQISDEGLLYEKLLDRQQGRILCTAW 163 (708)
Q Consensus 92 ~i~vwd~~~~~~~~--~~~~~~~~v~~~~~s~~~~~la~~~~d------~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~ 163 (708)
.+..||..+.+-.. .+..... -.+++. -++...++|+.+ ..+..||..++.......+....... +++
T Consensus 273 ~v~~yd~~~~~W~~l~~mp~~r~-~~~~a~-l~~~IYviGG~~~~~~~~~~v~~Yd~~~n~W~~~~~m~~~R~~~-~~~- 348 (557)
T PHA02713 273 CILVYNINTMEYSVISTIPNHII-NYASAI-VDNEIIIAGGYNFNNPSLNKVYKINIENKIHVELPPMIKNRCRF-SLA- 348 (557)
T ss_pred CEEEEeCCCCeEEECCCCCcccc-ceEEEE-ECCEEEEEcCCCCCCCccceEEEEECCCCeEeeCCCCcchhhce-eEE-
Confidence 56778877764221 1111111 112222 356667777753 34788898887664222222111111 222
Q ss_pred CCCCCEEEEecCC------eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCC------------
Q psy12614 164 HSSGDYLVTGCAA------AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGG------------ 224 (708)
Q Consensus 164 s~d~~~l~~~~~d------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg------------ 224 (708)
.-+|+..+.||.+ .+..||..+.+-...-.... ...-.+++ .-+|+ ++.|+.++
T Consensus 349 ~~~g~IYviGG~~~~~~~~sve~Ydp~~~~W~~~~~mp~------~r~~~~~~-~~~g~IYviGG~~~~~~~~~~~~~~~ 421 (557)
T PHA02713 349 VIDDTIYAIGGQNGTNVERTIECYTMGDDKWKMLPDMPI------ALSSYGMC-VLDQYIYIIGGRTEHIDYTSVHHMNS 421 (557)
T ss_pred EECCEEEEECCcCCCCCCceEEEEECCCCeEEECCCCCc------ccccccEE-EECCEEEEEeCCCccccccccccccc
Confidence 2356666666653 48889987764332111110 11111111 22565 56666542
Q ss_pred -----------cEEEEeCCCCeeEE--EeeccccCeEEEEEeCCCCEEEEEecCC------eEEEEEccCCcccccCCCC
Q psy12614 225 -----------FVRFWDGKTGVQWS--DVKTHKKDILALTVSEDENYLYCAGVDP------TVVCFQRTRKPQVCSTSGP 285 (708)
Q Consensus 225 -----------~i~~wd~~~~~~~~--~~~~~~~~i~~~~~s~~~~~l~~~~~dg------~i~iw~~~~~~~~~~~~g~ 285 (708)
.+..||..+.+-.. .+....... +++ .-+++..+.|+.++ .+..||..+ .
T Consensus 422 ~~~~~~~~~~~~ve~YDP~td~W~~v~~m~~~r~~~-~~~-~~~~~IYv~GG~~~~~~~~~~ve~Ydp~~--------~- 490 (557)
T PHA02713 422 IDMEEDTHSSNKVIRYDTVNNIWETLPNFWTGTIRP-GVV-SHKDDIYVVCDIKDEKNVKTCIFRYNTNT--------Y- 490 (557)
T ss_pred ccccccccccceEEEECCCCCeEeecCCCCcccccC-cEE-EECCEEEEEeCCCCCCccceeEEEecCCC--------C-
Confidence 47778887664322 221111111 222 23455666666542 355676653 1
Q ss_pred CCCCcceEEeEEEeccccceEEEEEeCCEEEEEcCCC--eEEEEeCCCCceeecC
Q psy12614 286 EQGSSVWVRSVNRVIHEGDVKSLALHGNRLYSGGLDS--YLSLSYYPPKTLVKYP 338 (708)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~s~~~d~--~i~iw~~~~~~~~~~~ 338 (708)
.+|.....+...........+.+...++||.++ .+-.||..+.+...+.
T Consensus 491 ----~~W~~~~~m~~~r~~~~~~~~~~~iyv~Gg~~~~~~~e~yd~~~~~W~~~~ 541 (557)
T PHA02713 491 ----NGWELITTTESRLSALHTILHDNTIMMLHCYESYMLQDTFNVYTYEWNHIC 541 (557)
T ss_pred ----CCeeEccccCcccccceeEEECCEEEEEeeecceeehhhcCcccccccchh
Confidence 257766666555555555555588888999888 6667777766644433
|
|
| >KOG2444|consensus | Back alignment and domain information |
|---|
Probab=96.90 E-value=0.003 Score=55.26 Aligned_cols=103 Identities=11% Similarity=0.103 Sum_probs=72.3
Q ss_pred CCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe---CCEEEEEcCCCcEEEEECCCCeEeEEEeecC-Cc
Q psy12614 38 SSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF---NDRLFSGGLQGFVNEYDMRRLNIKSSTAVTS-GT 113 (708)
Q Consensus 38 ~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~---~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~-~~ 113 (708)
+.-|++|+.+|.|.+|+....-........-. ..|.++--. +.+..+++.||.|+.|+++..+.+.....|. .+
T Consensus 70 ~~~~~vG~~dg~v~~~n~n~~g~~~d~~~s~~--e~i~~~Ip~~~~~~~~c~~~~dg~ir~~n~~p~k~~g~~g~h~~~~ 147 (238)
T KOG2444|consen 70 SAKLMVGTSDGAVYVFNWNLEGAHSDRVCSGE--ESIDLGIPNGRDSSLGCVGAQDGRIRACNIKPNKVLGYVGQHNFES 147 (238)
T ss_pred CceEEeecccceEEEecCCccchHHHhhhccc--ccceeccccccccceeEEeccCCceeeeccccCceeeeeccccCCC
Confidence 45689999999999999874221111222222 455555444 4588899999999999999999888888887 56
Q ss_pred eEEEEEecCCCEEEEE--eCCCcEEEEEccC
Q psy12614 114 CWCLSVHKKKRLLAAG--TEQGHINLFQISD 142 (708)
Q Consensus 114 v~~~~~s~~~~~la~~--~~d~~i~iwd~~~ 142 (708)
+.....+..++.++.+ +.|..++.|++..
T Consensus 148 ~e~~ivv~sd~~i~~a~~S~d~~~k~W~ve~ 178 (238)
T KOG2444|consen 148 GEELIVVGSDEFLKIADTSHDRVLKKWNVEK 178 (238)
T ss_pred cceeEEecCCceEEeeccccchhhhhcchhh
Confidence 6666666666666666 6677777777653
|
|
| >KOG2079|consensus | Back alignment and domain information |
|---|
Probab=96.90 E-value=0.011 Score=63.40 Aligned_cols=68 Identities=15% Similarity=0.333 Sum_probs=54.8
Q ss_pred CCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe-----CCEEEEEcCCCcEEEEEC
Q psy12614 26 PKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF-----NDRLFSGGLQGFVNEYDM 98 (708)
Q Consensus 26 ~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~-----~~~l~s~~~d~~i~vwd~ 98 (708)
.++|++++|+.+|++++.|-.+|.|.+||...++.++ .+..|. .+.+++-+. +..++++...|. +|.+
T Consensus 130 ~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~k~l~-~i~e~~--ap~t~vi~v~~t~~nS~llt~D~~Gs--f~~l 202 (1206)
T KOG2079|consen 130 QGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRAKILK-VITEHG--APVTGVIFVGRTSQNSKLLTSDTGGS--FWKL 202 (1206)
T ss_pred CCcceeeEecCCCceeccccCCCcEEEEEccCCccee-eeeecC--CccceEEEEEEeCCCcEEEEccCCCc--eEEE
Confidence 5889999999999999999999999999999988876 666666 666665554 556778877776 5653
|
|
| >KOG2079|consensus | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.026 Score=60.71 Aligned_cols=109 Identities=17% Similarity=0.270 Sum_probs=76.3
Q ss_pred CcEEEEEEeCCEEEEEcCCCcEEEEECCCC-eEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEe
Q psy12614 72 NSIECLTWFNDRLFSGGLQGFVNEYDMRRL-NIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKL 150 (708)
Q Consensus 72 ~~v~~l~~~~~~l~s~~~d~~i~vwd~~~~-~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~ 150 (708)
..+.+.+.-+..++.|+..|.+...|+... ++...=..-.++|++++|+.+|..++.|-.+|.|.+||..+++.. +.
T Consensus 90 ~~v~s~a~~~~~ivi~Ts~ghvl~~d~~~nL~~~~~ne~v~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~k~l--~~ 167 (1206)
T KOG2079|consen 90 AGVISSAIVVVPIVIGTSHGHVLLSDMTGNLGPLHQNERVQGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRAKIL--KV 167 (1206)
T ss_pred cceeeeeeeeeeEEEEcCchhhhhhhhhcccchhhcCCccCCcceeeEecCCCceeccccCCCcEEEEEccCCcce--ee
Confidence 445555555888999999999999887763 222222234579999999999999999999999999999998877 44
Q ss_pred ccccccc---EEEEEECCCCCEEEEecCC-eEEEEEcC
Q psy12614 151 LDRQQGR---ILCTAWHSSGDYLVTGCAA-AVRVWDIH 184 (708)
Q Consensus 151 ~~~~~~~---v~~~~~s~d~~~l~~~~~d-~i~iwd~~ 184 (708)
+..|..+ |..+.+..++..++++... . +|.+.
T Consensus 168 i~e~~ap~t~vi~v~~t~~nS~llt~D~~Gs--f~~lv 203 (1206)
T KOG2079|consen 168 ITEHGAPVTGVIFVGRTSQNSKLLTSDTGGS--FWKLV 203 (1206)
T ss_pred eeecCCccceEEEEEEeCCCcEEEEccCCCc--eEEEE
Confidence 4444433 3344445556666665554 3 56543
|
|
| >PF15390 DUF4613: Domain of unknown function (DUF4613) | Back alignment and domain information |
|---|
Probab=96.72 E-value=0.84 Score=46.51 Aligned_cols=182 Identities=15% Similarity=0.221 Sum_probs=105.8
Q ss_pred CCcEEEEEEcCCCCEEE-EE--eCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe------CCEEEEEcCCCcEEEE
Q psy12614 26 PKVINCIACEPKSSRLA-VS--RADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF------NDRLFSGGLQGFVNEY 96 (708)
Q Consensus 26 ~~~v~~~~~s~~~~~la-~~--~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~------~~~l~s~~~d~~i~vw 96 (708)
-.+|..+||. ||+.++ +. -.+|.++.=|. ...|.- .-|..++|. -..|++......|.||
T Consensus 19 iHPvhGlaWT-DGkqVvLT~L~l~~gE~kfGds--------~viGqF--EhV~GlsW~P~~~~~~paLLAVQHkkhVtVW 87 (671)
T PF15390_consen 19 IHPVHGLAWT-DGKQVVLTDLQLHNGEPKFGDS--------KVIGQF--EHVHGLSWAPPCTADTPALLAVQHKKHVTVW 87 (671)
T ss_pred hccccceEec-CCCEEEEEeeeeeCCccccCCc--------cEeecc--ceeeeeeecCcccCCCCceEEEeccceEEEE
Confidence 3457788886 555544 32 13444444332 223333 578999998 2367777788899999
Q ss_pred ECCC-----CeEeEEEeec-CC----ceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCC
Q psy12614 97 DMRR-----LNIKSSTAVT-SG----TCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSS 166 (708)
Q Consensus 97 d~~~-----~~~~~~~~~~-~~----~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d 166 (708)
-+.. ++.+..-..+ .. --..+.|+|....|++-.....-.++++..........+ ...+.|.|.+|.+|
T Consensus 88 qL~~s~~e~~K~l~sQtcEi~e~~pvLpQGCVWHPk~~iL~VLT~~dvSV~~sV~~d~srVkaDi-~~~G~IhCACWT~D 166 (671)
T PF15390_consen 88 QLCPSTTERNKLLMSQTCEIREPFPVLPQGCVWHPKKAILTVLTARDVSVLPSVHCDSSRVKADI-KTSGLIHCACWTKD 166 (671)
T ss_pred EeccCccccccceeeeeeeccCCcccCCCcccccCCCceEEEEecCceeEeeeeeeCCceEEEec-cCCceEEEEEecCc
Confidence 8752 3333222211 11 124578999999888876655556677664443322444 45688999999999
Q ss_pred CCEEEEecCC--eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEEEEcC
Q psy12614 167 GDYLVTGCAA--AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDS 222 (708)
Q Consensus 167 ~~~l~~~~~d--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~ 222 (708)
|++|+.+-.. .-++||-.... +...... .-|...+.|.++.-.-|.+++.+..
T Consensus 167 G~RLVVAvGSsLHSyiWd~~qKt-L~~Csfc--PVFdv~~~Icsi~AT~dsqVAvaTE 221 (671)
T PF15390_consen 167 GQRLVVAVGSSLHSYIWDSAQKT-LHRCSFC--PVFDVGGYICSIEATVDSQVAVATE 221 (671)
T ss_pred CCEEEEEeCCeEEEEEecCchhh-hhhCCcc--eeecCCCceEEEEEeccceEEEEec
Confidence 9998876555 88999954321 1111100 0012245566665555555555443
|
|
| >PHA02713 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.15 Score=54.25 Aligned_cols=213 Identities=10% Similarity=0.034 Sum_probs=106.5
Q ss_pred cEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe-CCEEEEEcCC------CcEEEEECCCCeEeEEEeec-CCceEEEEEe
Q psy12614 49 SIEIWDISETPHVDRVFIGDPLSNSIECLTWF-NDRLFSGGLQ------GFVNEYDMRRLNIKSSTAVT-SGTCWCLSVH 120 (708)
Q Consensus 49 ~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~-~~~l~s~~~d------~~i~vwd~~~~~~~~~~~~~-~~~v~~~~~s 120 (708)
.+..||..+++... +..-.....-.+++.. +...+.||.+ ..+..||..+..-.. +..- ...-...+..
T Consensus 273 ~v~~yd~~~~~W~~--l~~mp~~r~~~~~a~l~~~IYviGG~~~~~~~~~~v~~Yd~~~n~W~~-~~~m~~~R~~~~~~~ 349 (557)
T PHA02713 273 CILVYNINTMEYSV--ISTIPNHIINYASAIVDNEIIIAGGYNFNNPSLNKVYKINIENKIHVE-LPPMIKNRCRFSLAV 349 (557)
T ss_pred CEEEEeCCCCeEEE--CCCCCccccceEEEEECCEEEEEcCCCCCCCccceEEEEECCCCeEee-CCCCcchhhceeEEE
Confidence 57788988865432 2111100111233333 5566666643 347778877764211 1110 1111112223
Q ss_pred cCCCEEEEEeCCC-----cEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-------------------
Q psy12614 121 KKKRLLAAGTEQG-----HINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA------------------- 176 (708)
Q Consensus 121 ~~~~~la~~~~d~-----~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d------------------- 176 (708)
-+|+..+.|+.++ .+..||..+++......+.........+.+ +|...+.|+.+
T Consensus 350 ~~g~IYviGG~~~~~~~~sve~Ydp~~~~W~~~~~mp~~r~~~~~~~~--~g~IYviGG~~~~~~~~~~~~~~~~~~~~~ 427 (557)
T PHA02713 350 IDDTIYAIGGQNGTNVERTIECYTMGDDKWKMLPDMPIALSSYGMCVL--DQYIYIIGGRTEHIDYTSVHHMNSIDMEED 427 (557)
T ss_pred ECCEEEEECCcCCCCCCceEEEEECCCCeEEECCCCCcccccccEEEE--CCEEEEEeCCCccccccccccccccccccc
Confidence 3677777887653 488899988876532232221111222222 56666666542
Q ss_pred -----eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCC------CcEEEEeCCC-Ce--eEEEee
Q psy12614 177 -----AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSG------GFVRFWDGKT-GV--QWSDVK 241 (708)
Q Consensus 177 -----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~d------g~i~~wd~~~-~~--~~~~~~ 241 (708)
.+..||..+.+-...-.... ...-.+++ .-+|+ ++.|+.+ ..+..||..+ .+ .+..++
T Consensus 428 ~~~~~~ve~YDP~td~W~~v~~m~~------~r~~~~~~-~~~~~IYv~GG~~~~~~~~~~ve~Ydp~~~~~W~~~~~m~ 500 (557)
T PHA02713 428 THSSNKVIRYDTVNNIWETLPNFWT------GTIRPGVV-SHKDDIYVVCDIKDEKNVKTCIFRYNTNTYNGWELITTTE 500 (557)
T ss_pred ccccceEEEECCCCCeEeecCCCCc------ccccCcEE-EECCEEEEEeCCCCCCccceeEEEecCCCCCCeeEccccC
Confidence 46778877654332111110 11111222 22455 5666654 2467899886 33 333443
Q ss_pred ccccCeEEEEEeCCCCEEEEEecCC--eEEEEEccC
Q psy12614 242 THKKDILALTVSEDENYLYCAGVDP--TVVCFQRTR 275 (708)
Q Consensus 242 ~~~~~i~~~~~s~~~~~l~~~~~dg--~i~iw~~~~ 275 (708)
........+++ +++..++|+.++ .+..||..+
T Consensus 501 ~~r~~~~~~~~--~~~iyv~Gg~~~~~~~e~yd~~~ 534 (557)
T PHA02713 501 SRLSALHTILH--DNTIMMLHCYESYMLQDTFNVYT 534 (557)
T ss_pred cccccceeEEE--CCEEEEEeeecceeehhhcCccc
Confidence 33333222332 677888888888 677788777
|
|
| >TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family | Back alignment and domain information |
|---|
Probab=96.54 E-value=1.5 Score=48.13 Aligned_cols=203 Identities=10% Similarity=0.076 Sum_probs=115.8
Q ss_pred CCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCC-----cEEEEEEe------------------CCEEEEEcCCCcEE
Q psy12614 38 SSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSN-----SIECLTWF------------------NDRLFSGGLQGFVN 94 (708)
Q Consensus 38 ~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~-----~v~~l~~~------------------~~~l~s~~~d~~i~ 94 (708)
+..|.+++.++.|.-.|..+|+.+=+.-....... ..+.+++- +++++.++.|+.+.
T Consensus 194 gg~lYv~t~~~~V~ALDa~TGk~lW~~d~~~~~~~~~~~~~cRGvay~~~p~~~~~~~~~~~p~~~~~rV~~~T~Dg~Li 273 (764)
T TIGR03074 194 GDTLYLCTPHNKVIALDAATGKEKWKFDPKLKTEAGRQHQTCRGVSYYDAPAAAAGPAAPAAPADCARRIILPTSDARLI 273 (764)
T ss_pred CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCcccccccccccceEEecCCcccccccccccccccCCEEEEecCCCeEE
Confidence 56777788888999999999887642211111000 11223332 34888999999999
Q ss_pred EEECCCCeEeEEEeecCCceE-------------EEEEec--CCCEEEEEeC----------CCcEEEEEccCCcEEEEE
Q psy12614 95 EYDMRRLNIKSSTAVTSGTCW-------------CLSVHK--KKRLLAAGTE----------QGHINLFQISDEGLLYEK 149 (708)
Q Consensus 95 vwd~~~~~~~~~~~~~~~~v~-------------~~~~s~--~~~~la~~~~----------d~~i~iwd~~~~~~~~~~ 149 (708)
-.|.++|+....+... +.|. .+.-.| .+..+++|+. +|.|+-+|.++|++....
T Consensus 274 ALDA~TGk~~W~fg~~-G~vdl~~~~g~~~~g~~~~ts~P~V~~g~VIvG~~v~d~~~~~~~~G~I~A~Da~TGkl~W~~ 352 (764)
T TIGR03074 274 ALDADTGKLCEDFGNN-GTVDLTAGMGTTPPGYYYPTSPPLVAGTTVVIGGRVADNYSTDEPSGVIRAFDVNTGALVWAW 352 (764)
T ss_pred EEECCCCCEEEEecCC-CceeeecccCcCCCcccccccCCEEECCEEEEEecccccccccCCCcEEEEEECCCCcEeeEE
Confidence 9999999988776422 2110 111112 1345666643 688999999999988644
Q ss_pred ecccc-------cc--------cE-EEEEECCCCCEEEEecC------------------C-eEEEEEcCCCceEEEEEe
Q psy12614 150 LLDRQ-------QG--------RI-LCTAWHSSGDYLVTGCA------------------A-AVRVWDIHKGHAIHKMSL 194 (708)
Q Consensus 150 ~~~~~-------~~--------~v-~~~~~s~d~~~l~~~~~------------------d-~i~iwd~~~~~~~~~~~~ 194 (708)
..... .+ .+ ..+++.++...++.... . .|.-.|+++|+....++.
T Consensus 353 ~~g~p~~~~~~~~g~~~~~gg~n~W~~~s~D~~~glvy~ptGn~~pd~~g~~r~~~~n~y~~slvALD~~TGk~~W~~Q~ 432 (764)
T TIGR03074 353 DPGNPDPTAPPAPGETYTRNTPNSWSVASYDEKLGLVYLPMGNQTPDQWGGDRTPADEKYSSSLVALDATTGKERWVFQT 432 (764)
T ss_pred ecCCCCcccCCCCCCEeccCCCCccCceEEcCCCCeEEEeCCCccccccCCccccCcccccceEEEEeCCCCceEEEecc
Confidence 32100 00 01 22344444434333111 1 466778888888777765
Q ss_pred cccCC--CCCceeEEEEEEcc-CC----EEEEEcCCCcEEEEeCCCCeeEEEee
Q psy12614 195 DKSSK--FSKNTAVWCVAFCA-DF----TIITGDSGGFVRFWDGKTGVQWSDVK 241 (708)
Q Consensus 195 ~~~~~--~~~~~~v~~~~~~~-~~----~l~~~~~dg~i~~wd~~~~~~~~~~~ 241 (708)
.+... |.......-+.+.. +| .++.++.+|.+.++|-++|+.+...+
T Consensus 433 ~~hD~WD~D~~~~p~L~d~~~~~G~~~~~v~~~~K~G~~~vlDr~tG~~l~~~~ 486 (764)
T TIGR03074 433 VHHDLWDMDVPAQPSLVDLPDADGTTVPALVAPTKQGQIYVLDRRTGEPIVPVE 486 (764)
T ss_pred cCCccccccccCCceEEeeecCCCcEeeEEEEECCCCEEEEEECCCCCEEeece
Confidence 32100 00001111111222 55 27788889999999998888876654
|
This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases. |
| >COG5276 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=96.54 E-value=0.64 Score=42.85 Aligned_cols=274 Identities=11% Similarity=0.084 Sum_probs=149.4
Q ss_pred CcEEEEEEeCCEEEEEcCCCcEEEEECCCCeEeEEEeec--CCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEE-EE
Q psy12614 72 NSIECLTWFNDRLFSGGLQGFVNEYDMRRLNIKSSTAVT--SGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLL-YE 148 (708)
Q Consensus 72 ~~v~~l~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~--~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~-~~ 148 (708)
+-+..+.+++++...+..+.-++|.|+.+...-..+..- .+--. .+.-.|++..++..|.-+.+.|+.+..-. ..
T Consensus 87 ~l~~Dv~vse~yvyvad~ssGL~IvDIS~P~sP~~~~~lnt~gyay--gv~vsGn~aYVadlddgfLivdvsdpssP~la 164 (370)
T COG5276 87 DLFADVRVSEEYVYVADWSSGLRIVDISTPDSPTLIGFLNTDGYAY--GVYVSGNYAYVADLDDGFLIVDVSDPSSPQLA 164 (370)
T ss_pred hhhheeEecccEEEEEcCCCceEEEeccCCCCcceeccccCCceEE--EEEecCCEEEEeeccCcEEEEECCCCCCceee
Confidence 567788888999999999999999999885432222211 12223 33445778877775666778898865432 11
Q ss_pred EecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEEEEcCCCcEE
Q psy12614 149 KLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVR 227 (708)
Q Consensus 149 ~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~ 227 (708)
.........-..++.| |++-..+..| .+.+-|+.+......+..- .-...+.++..+++.-+++.... -+.
T Consensus 165 grya~~~~d~~~v~IS--Gn~AYvA~~d~GL~ivDVSnp~sPvli~~~-----n~g~g~~sv~vsdnr~y~vvy~e-gvl 236 (370)
T COG5276 165 GRYALPGGDTHDVAIS--GNYAYVAWRDGGLTIVDVSNPHSPVLIGSY-----NTGPGTYSVSVSDNRAYLVVYDE-GVL 236 (370)
T ss_pred eeeccCCCCceeEEEe--cCeEEEEEeCCCeEEEEccCCCCCeEEEEE-----ecCCceEEEEecCCeeEEEEccc-ceE
Confidence 2232223333556665 6777777788 8999998765443322221 11335777777766544444433 366
Q ss_pred EEeCCCCeeEEEeec-cccCeEEE-EEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccce
Q psy12614 228 FWDGKTGVQWSDVKT-HKKDILAL-TVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDV 305 (708)
Q Consensus 228 ~wd~~~~~~~~~~~~-~~~~i~~~-~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v 305 (708)
+-|..+.+....+.. ....+.++ .+.-.+++...+..+.-+.+-|...++... ....+......-
T Consensus 237 ivd~s~~ssp~~~gsyet~~p~~~s~v~Vs~~~~Yvadga~gl~~idisnp~spf-------------l~ss~~t~g~~a 303 (370)
T COG5276 237 IVDVSGPSSPTVFGSYETSNPVSISTVPVSGEYAYVADGAKGLPIIDISNPPSPF-------------LSSSLDTAGYQA 303 (370)
T ss_pred EEecCCCCCceEeeccccCCcccccceecccceeeeeccccCceeEeccCCCCCc-------------hhccccCCCccc
Confidence 667655443332211 11222222 333346677777778778888887621111 111122222244
Q ss_pred EEEEEeCCEEEEEcCCCeEEEEeCCCCc-eeecCccCCCCceEEEEcCCcEEEE-EcCCeEEEEEe
Q psy12614 306 KSLALHGNRLYSGGLDSYLSLSYYPPKT-LVKYPCTLAQSTPVSLAKDIQHVLL-QYTSHLELWSL 369 (708)
Q Consensus 306 ~~l~~~~~~l~s~~~d~~i~iw~~~~~~-~~~~~~~~~~~~~~~~s~~~~~l~~-~~~~~i~i~~~ 369 (708)
..+...++++..+..+ ...+-+..... ..+.++...+..+.+.+-+.+.+.. -.++.+.+|+.
T Consensus 304 ~gi~ay~~y~yiadkn-~g~vV~~s~~s~m~~~~g~~ti~~s~~v~~~~q~~y~~d~~~gl~i~~~ 368 (370)
T COG5276 304 AGIRAYGNYNYIADKN-TGAVVDASPPSMMDKRPGRPTIGQSCDVSVDTQIIYSTDYNGGLSIIEY 368 (370)
T ss_pred cceEEecCeeEeccCC-ceEEEeCCChhhcccccCcceEeeecceEEEeeEEEEeecCCCEEEEEe
Confidence 5556667777766665 33344444333 2222222223334444444554444 36677777764
|
|
| >PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus | Back alignment and domain information |
|---|
Probab=96.52 E-value=1.1 Score=45.09 Aligned_cols=89 Identities=17% Similarity=0.258 Sum_probs=58.0
Q ss_pred EEEEcCCCCEEEEEeCCCcEEE---EeCCC-----CCeEEEEEecC---CCCCcEEEEEEe-----C--------CEEEE
Q psy12614 31 CIACEPKSSRLAVSRADQSIEI---WDISE-----TPHVDRVFIGD---PLSNSIECLTWF-----N--------DRLFS 86 (708)
Q Consensus 31 ~~~~s~~~~~la~~~~dg~v~i---wd~~~-----~~~~~~~~~~h---~~~~~v~~l~~~-----~--------~~l~s 86 (708)
+++.+|++++||.|..+..+.+ |+... +.... ...+. .....|+++.+- . ..+++
T Consensus 6 ~isls~~~d~laiA~~~r~vil~~~w~~~~~~~~~~~~~~-~~~g~l~~~~~e~ITsi~clpl~s~~~s~~~~dw~~I~V 84 (415)
T PF14655_consen 6 SISLSPDGDLLAIARGQRLVILTSKWDSSRKGENENTYSI-SWSGPLDDEPGECITSILCLPLSSQKRSTGGPDWTCIAV 84 (415)
T ss_pred eEEecCCCCEEEEEcCCEEEEEEeeccccccCCCCCeEEE-EeeeeccCCCCCEEEEEEEEEeecccccCCCCCcEEEEE
Confidence 5788999999999987766655 64421 11211 22221 101467777665 2 36788
Q ss_pred EcCCCcEEEEECCCCeEeEEEeecCCceEEEEEec
Q psy12614 87 GGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHK 121 (708)
Q Consensus 87 ~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~ 121 (708)
|..+|.|++|.. +|..+..-.-|..+|..+.+..
T Consensus 85 G~ssG~vrfyte-~G~LL~~Q~~h~~pV~~ik~~~ 118 (415)
T PF14655_consen 85 GTSSGYVRFYTE-NGVLLLSQLLHEEPVLKIKCRS 118 (415)
T ss_pred EecccEEEEEec-cchHHHHHhcCccceEEEEecc
Confidence 899999999995 6666655556777787777643
|
|
| >KOG2395|consensus | Back alignment and domain information |
|---|
Probab=96.52 E-value=0.1 Score=51.73 Aligned_cols=140 Identities=18% Similarity=0.216 Sum_probs=97.7
Q ss_pred EEEEEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCE-------EEEEeCCCcEEEEEccCCcEEEEEecccc-
Q psy12614 83 RLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRL-------LAAGTEQGHINLFQISDEGLLYEKLLDRQ- 154 (708)
Q Consensus 83 ~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~-------la~~~~d~~i~iwd~~~~~~~~~~~~~~~- 154 (708)
.|.++.....++--|++.|+.+.....+.. |.-+.+.|+.+. -+.|-.+..|.-||.+-...-......+|
T Consensus 348 il~~~~~~~~l~klDIE~GKIVeEWk~~~d-i~mv~~t~d~K~~Ql~~e~TlvGLs~n~vfriDpRv~~~~kl~~~q~kq 426 (644)
T KOG2395|consen 348 ILMDGGEQDKLYKLDIERGKIVEEWKFEDD-INMVDITPDFKFAQLTSEQTLVGLSDNSVFRIDPRVQGKNKLAVVQSKQ 426 (644)
T ss_pred EeeCCCCcCcceeeecccceeeeEeeccCC-cceeeccCCcchhcccccccEEeecCCceEEecccccCcceeeeeeccc
Confidence 444666777899999999999999988766 788888887542 24566788999999873322000122222
Q ss_pred ---cccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEEEEcCCCcEEEEe
Q psy12614 155 ---QGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWD 230 (708)
Q Consensus 155 ---~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~wd 230 (708)
.....|.+-..+| +||+|+.+ .|++||- .+..-.+... +-..+|..+..+.||..+.|+.+..+.+.+
T Consensus 427 y~~k~nFsc~aTT~sG-~IvvgS~~GdIRLYdr-i~~~AKTAlP------gLG~~I~hVdvtadGKwil~Tc~tyLlLi~ 498 (644)
T KOG2395|consen 427 YSTKNNFSCFATTESG-YIVVGSLKGDIRLYDR-IGRRAKTALP------GLGDAIKHVDVTADGKWILATCKTYLLLID 498 (644)
T ss_pred cccccccceeeecCCc-eEEEeecCCcEEeehh-hhhhhhhccc------ccCCceeeEEeeccCcEEEEecccEEEEEE
Confidence 2345566655566 78999999 9999996 4444333322 227889999999999977777788888877
Q ss_pred C
Q psy12614 231 G 231 (708)
Q Consensus 231 ~ 231 (708)
+
T Consensus 499 t 499 (644)
T KOG2395|consen 499 T 499 (644)
T ss_pred E
Confidence 5
|
|
| >KOG2444|consensus | Back alignment and domain information |
|---|
Probab=96.48 E-value=0.0039 Score=54.55 Aligned_cols=138 Identities=14% Similarity=0.064 Sum_probs=81.5
Q ss_pred EEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeE
Q psy12614 128 AGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAV 206 (708)
Q Consensus 128 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v 206 (708)
..+.++.|+-+++...+... +...-+..... ...-+..++.|+.+ .|.+|++.-.-....+... . ...|
T Consensus 35 ~~sa~~~v~~~~~~k~k~s~-rse~~~~e~~~---v~~~~~~~~vG~~dg~v~~~n~n~~g~~~d~~~s-----~-~e~i 104 (238)
T KOG2444|consen 35 ATSADGLVRERKVRKHKESC-RSERFIDEGQR---VVTASAKLMVGTSDGAVYVFNWNLEGAHSDRVCS-----G-EESI 104 (238)
T ss_pred cccCCcccccchhhhhhhhh-hhhhhhhccee---ecccCceEEeecccceEEEecCCccchHHHhhhc-----c-cccc
Confidence 34567777777665443321 11111221111 11234567888888 8888887622111111111 0 2223
Q ss_pred EEE-EEccCC-EEEEEcCCCcEEEEeCCCCeeEEEeeccc-cCeEEEEEeCCCCEEEEE--ecCCeEEEEEccC
Q psy12614 207 WCV-AFCADF-TIITGDSGGFVRFWDGKTGVQWSDVKTHK-KDILALTVSEDENYLYCA--GVDPTVVCFQRTR 275 (708)
Q Consensus 207 ~~~-~~~~~~-~l~~~~~dg~i~~wd~~~~~~~~~~~~~~-~~i~~~~~s~~~~~l~~~--~~dg~i~iw~~~~ 275 (708)
.++ .-..++ ...++..+|.|+.|+..-++.+.....|. .++..+..+..++.++.+ +.|..++.|++..
T Consensus 105 ~~~Ip~~~~~~~~c~~~~dg~ir~~n~~p~k~~g~~g~h~~~~~e~~ivv~sd~~i~~a~~S~d~~~k~W~ve~ 178 (238)
T KOG2444|consen 105 DLGIPNGRDSSLGCVGAQDGRIRACNIKPNKVLGYVGQHNFESGEELIVVGSDEFLKIADTSHDRVLKKWNVEK 178 (238)
T ss_pred eeccccccccceeEEeccCCceeeeccccCceeeeeccccCCCcceeEEecCCceEEeeccccchhhhhcchhh
Confidence 332 222233 36788999999999999888888887777 666666666666777777 7777888888765
|
|
| >PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain | Back alignment and domain information |
|---|
Probab=96.47 E-value=0.011 Score=37.95 Aligned_cols=30 Identities=17% Similarity=0.288 Sum_probs=26.0
Q ss_pred CCCceEEEEcCCCCEEEEEecCCcEEEEEc
Q psy12614 539 RKPSTAMAIHPTLSTLVTVYSDHRIVEFDL 568 (708)
Q Consensus 539 ~~~v~~l~~s~d~~~l~~~~~dg~i~vwd~ 568 (708)
...|..++|+|...+||.++.+|.|.+|.+
T Consensus 11 ~~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl 40 (47)
T PF12894_consen 11 PSRVSCMSWCPTMDLIALGTEDGEVLVYRL 40 (47)
T ss_pred CCcEEEEEECCCCCEEEEEECCCeEEEEEC
Confidence 356888999999999999999999999988
|
|
| >PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases | Back alignment and domain information |
|---|
Probab=96.45 E-value=1.1 Score=44.33 Aligned_cols=49 Identities=20% Similarity=0.349 Sum_probs=35.6
Q ss_pred EEEEEEccCCEEEEEcCCCcEEEEeCCCCee---EEEe----eccccCeEEEEEeCC
Q psy12614 206 VWCVAFCADFTIITGDSGGFVRFWDGKTGVQ---WSDV----KTHKKDILALTVSED 255 (708)
Q Consensus 206 v~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~---~~~~----~~~~~~i~~~~~s~~ 255 (708)
.+.|+|.|||+++++...|.|++++ ..+.. +..+ .........+++.|+
T Consensus 4 P~~~a~~pdG~l~v~e~~G~i~~~~-~~g~~~~~v~~~~~v~~~~~~gllgia~~p~ 59 (331)
T PF07995_consen 4 PRSMAFLPDGRLLVAERSGRIWVVD-KDGSLKTPVADLPEVFADGERGLLGIAFHPD 59 (331)
T ss_dssp EEEEEEETTSCEEEEETTTEEEEEE-TTTEECEEEEE-TTTBTSTTBSEEEEEE-TT
T ss_pred ceEEEEeCCCcEEEEeCCceEEEEe-CCCcCcceecccccccccccCCcccceeccc
Confidence 6789999999988888899999999 44543 2222 123457789999995
|
The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B .... |
| >KOG2280|consensus | Back alignment and domain information |
|---|
Probab=96.34 E-value=0.77 Score=48.13 Aligned_cols=52 Identities=19% Similarity=0.341 Sum_probs=40.9
Q ss_pred CCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccC
Q psy12614 222 SGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTR 275 (708)
Q Consensus 222 ~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~ 275 (708)
.--.|+||+. +|+.+..+......+..+.|+.+. .|++...+|.+++|++-.
T Consensus 62 a~~~I~If~~-sG~lL~~~~w~~~~lI~mgWs~~e-eLI~v~k~g~v~Vy~~~g 113 (829)
T KOG2280|consen 62 ARPYIRIFNI-SGQLLGRILWKHGELIGMGWSDDE-ELICVQKDGTVHVYGLLG 113 (829)
T ss_pred cceeEEEEec-cccchHHHHhcCCCeeeecccCCc-eEEEEeccceEEEeecch
Confidence 3456899996 588877766555688899999876 566778899999999875
|
|
| >PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2 | Back alignment and domain information |
|---|
Probab=96.26 E-value=0.95 Score=41.83 Aligned_cols=188 Identities=10% Similarity=0.053 Sum_probs=112.5
Q ss_pred CCCCCcEEEEEE-e-CCEEEEEcCCC--cEEEEECCCCeEeEEEeecC-CceEEEEEecCCCEEEEEeCCCcEEEEEccC
Q psy12614 68 DPLSNSIECLTW-F-NDRLFSGGLQG--FVNEYDMRRLNIKSSTAVTS-GTCWCLSVHKKKRLLAAGTEQGHINLFQISD 142 (708)
Q Consensus 68 h~~~~~v~~l~~-~-~~~l~s~~~d~--~i~vwd~~~~~~~~~~~~~~-~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~ 142 (708)
|.-..-...+.| . +..+-+.+.-| .|+.+|+.+++......-.. --=-.++...| +.....-.++...+||..+
T Consensus 41 Hd~~aFTQGL~~~~~g~LyESTG~yG~S~l~~~d~~tg~~~~~~~l~~~~FgEGit~~~d-~l~qLTWk~~~~f~yd~~t 119 (264)
T PF05096_consen 41 HDPTAFTQGLEFLDDGTLYESTGLYGQSSLRKVDLETGKVLQSVPLPPRYFGEGITILGD-KLYQLTWKEGTGFVYDPNT 119 (264)
T ss_dssp --TT-EEEEEEEEETTEEEEEECSTTEEEEEEEETTTSSEEEEEE-TTT--EEEEEEETT-EEEEEESSSSEEEEEETTT
T ss_pred CCCcccCccEEecCCCEEEEeCCCCCcEEEEEEECCCCcEEEEEECCccccceeEEEECC-EEEEEEecCCeEEEEcccc
Confidence 442356677888 4 55556666655 79999999998776554221 11123444433 3333345688999999998
Q ss_pred CcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEE
Q psy12614 143 EGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITG 220 (708)
Q Consensus 143 ~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~ 220 (708)
-+.+....+. +.=..++ .|++.|+..... .+.++|..+.+...++.....+. .-..++-+.|. +|. ++-.
T Consensus 120 l~~~~~~~y~---~EGWGLt--~dg~~Li~SDGS~~L~~~dP~~f~~~~~i~V~~~g~--pv~~LNELE~i-~G~IyANV 191 (264)
T PF05096_consen 120 LKKIGTFPYP---GEGWGLT--SDGKRLIMSDGSSRLYFLDPETFKEVRTIQVTDNGR--PVSNLNELEYI-NGKIYANV 191 (264)
T ss_dssp TEEEEEEE-S---SS--EEE--ECSSCEEEE-SSSEEEEE-TTT-SEEEEEE-EETTE--E---EEEEEEE-TTEEEEEE
T ss_pred ceEEEEEecC---CcceEEE--cCCCEEEEECCccceEEECCcccceEEEEEEEECCE--ECCCcEeEEEE-cCEEEEEe
Confidence 8777444443 2334555 456556555555 99999999998888887653211 12334556665 665 5556
Q ss_pred cCCCcEEEEeCCCCeeEEEeec------------c---ccCeEEEEEeCCCCEEEEEec
Q psy12614 221 DSGGFVRFWDGKTGVQWSDVKT------------H---KKDILALTVSEDENYLYCAGV 264 (708)
Q Consensus 221 ~~dg~i~~wd~~~~~~~~~~~~------------~---~~~i~~~~~s~~~~~l~~~~~ 264 (708)
-....|...|..+|+....+.. . ..-.+.+|+.|+.+.|+..+.
T Consensus 192 W~td~I~~Idp~tG~V~~~iDls~L~~~~~~~~~~~~~~dVLNGIAyd~~~~~l~vTGK 250 (264)
T PF05096_consen 192 WQTDRIVRIDPETGKVVGWIDLSGLRPEVGRDKSRQPDDDVLNGIAYDPETDRLFVTGK 250 (264)
T ss_dssp TTSSEEEEEETTT-BEEEEEE-HHHHHHHTSTTST--TTS-EEEEEEETTTTEEEEEET
T ss_pred CCCCeEEEEeCCCCeEEEEEEhhHhhhcccccccccccCCeeEeEeEeCCCCEEEEEeC
Confidence 6677899999999998876521 0 234688999998877776654
|
3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X. |
| >COG5290 IkappaB kinase complex, IKAP component [Transcription] | Back alignment and domain information |
|---|
Probab=96.10 E-value=0.42 Score=50.08 Aligned_cols=261 Identities=13% Similarity=0.076 Sum_probs=124.5
Q ss_pred EEEEeCCCCEEEEEecCC-----eEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe-CCEEEEEcCCC
Q psy12614 249 ALTVSEDENYLYCAGVDP-----TVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH-GNRLYSGGLDS 322 (708)
Q Consensus 249 ~~~~s~~~~~l~~~~~dg-----~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~-~~~l~s~~~d~ 322 (708)
.++|-|+|..+++-+.|| .+.++..+. +..|+ .....+-...+..++|+ ...+......+
T Consensus 251 ~LSWkpqgS~~ati~td~~~~S~~ViFfErNG-----LrHGe---------f~lr~~~dEk~~~~~wn~~s~vlav~~~n 316 (1243)
T COG5290 251 QLSWKPQGSKYATIGTDGCSTSESVIFFERNG-----LRHGE---------FDLRVGCDEKAFLENWNLLSTVLAVAEGN 316 (1243)
T ss_pred ccccccCCceeeeeccCCCCCcceEEEEccCC-----cccCC---------ccccCCchhhhhhhhhhHHHHHHHHhhcc
Confidence 488999999999987665 466666654 22232 11112223345566666 33333344567
Q ss_pred eEEEEeCCCCce-eecCccCCCCceEEEEcCCcE-EEEEcCCeEEEEEecCC--CCCCCCCCCCCCcc------------
Q psy12614 323 YLSLSYYPPKTL-VKYPCTLAQSTPVSLAKDIQH-VLLQYTSHLELWSLGSA--QSTDLSSHSNTTGV------------ 386 (708)
Q Consensus 323 ~i~iw~~~~~~~-~~~~~~~~~~~~~~~s~~~~~-l~~~~~~~i~i~~~~~~--~~~~~~~~~~~~~~------------ 386 (708)
.+++|-..+... .+.....++..-+.|.|.... +.....+.|........ ..-.....+.++..
T Consensus 317 ~~~lwttkNyhWYLK~e~~ip~~s~vkwhpe~~nTl~f~d~~~I~~V~f~~k~~~~~s~~p~d~g~~~ViDGs~~l~Tpl 396 (1243)
T COG5290 317 LLKLWTTKNYHWYLKVERQIPGISYVKWHPEEKNTLLFRDGERILRVFFSEKKTHHGSEYPFDNGTSYVIDGSYMLYTPL 396 (1243)
T ss_pred eEEEEEccceEEEEEEeecCCCcceeeeccccCcEEEEecCCeEEEEEeehhhhcCCcccCccCCceEEEcCceEEecch
Confidence 889998877652 112213556666788886543 33344444443332221 11011111111111
Q ss_pred cCCCCceEEEEEEecCCCceEEEEeCCCCcEEEEEcCCceEEEEEEecCCcceeEEeecCCcccc--cceeEEEEEecCC
Q psy12614 387 PLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYSTESCVRLHSLDLDGDKPQISRIKNLPAPLF--KSIFTHVLISADS 464 (708)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~--~~~i~~~~~s~d~ 464 (708)
.+..-|..+....-+....|..++.+-..+..|+..+..+..+.++..+. +.+...++...- ......+.+-.++
T Consensus 397 sl~n~PPPm~~~~~~~d~NV~dv~~s~~~~~~aa~~~drli~f~~~s~e~---i~k~~ef~~sef~s~v~f~~~l~l~~~ 473 (1243)
T COG5290 397 SLKNLPPPMFSVRVGFDTNVVDVFPSFAEKKGAALLRDRLIMFRWDSEEF---INKRTEFLESEFDSIVLFDGFLVLKSG 473 (1243)
T ss_pred hhhcCCCCeEEEEecCCCceeeeccchhhhhHhhhccceeEEEecCcHHH---HHHhccccHHhhhhhccccceEEecCc
Confidence 11122334444444555666665554444455554444555555543211 111111221110 1112335666677
Q ss_pred CeEEEEecCCc--EEEecCCCeEEEEEecCCCCCccCcceEEEEECCCCcEEEEEecCCeEEEEECCc
Q psy12614 465 TLLLAVSLNGP--LYIIDLSSLEIKYCVDPYKSNLMSDVISLVQMSECKQYIVCADRKSHVVIWKNGQ 530 (708)
Q Consensus 465 ~~l~~~~~dg~--i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~ 530 (708)
..++....++. ++..+.++............ ... .-+.-+-+..++..+..+|.++-||++.
T Consensus 474 ~v~ll~dtnn~s~~~i~~~~d~~e~~k~~~ve~---~~~-~~l~~~~c~~~l~y~t~~G~v~~yn~e~ 537 (1243)
T COG5290 474 HVFLLKDTNNESDTYITRNGDVDERKKRGTVET---RRT-STLVHQLCQTLLRYGTCVGVVKHYNFEE 537 (1243)
T ss_pred eEEEEeccCCCcceEEeecCcccchhhccceee---eee-ehhhHHHHHHHHhhcccceeEEEecchh
Confidence 77776766665 55544332111111110000 001 1111122566788888899999999983
|
|
| >PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation | Back alignment and domain information |
|---|
Probab=96.10 E-value=1.3 Score=41.75 Aligned_cols=190 Identities=15% Similarity=0.048 Sum_probs=104.1
Q ss_pred cEEEEEECCCCCEEEEec--CC--eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEe-
Q psy12614 157 RILCTAWHSSGDYLVTGC--AA--AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWD- 230 (708)
Q Consensus 157 ~v~~~~~s~d~~~l~~~~--~d--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd- 230 (708)
.+.+.++++|++.++... .+ .+.++.. +........ ...+....|.+++. .+....+...+++.
T Consensus 25 ~~~s~AvS~dg~~~A~v~~~~~~~~L~~~~~--~~~~~~~~~--------g~~l~~PS~d~~g~~W~v~~~~~~~~~~~~ 94 (253)
T PF10647_consen 25 DVTSPAVSPDGSRVAAVSEGDGGRSLYVGPA--GGPVRPVLT--------GGSLTRPSWDPDGWVWTVDDGSGGVRVVRD 94 (253)
T ss_pred cccceEECCCCCeEEEEEEcCCCCEEEEEcC--CCcceeecc--------CCccccccccCCCCEEEEEcCCCceEEEEe
Confidence 688999999999888766 44 6666654 333333322 34677888999986 44445555556663
Q ss_pred CCCCeeEE-Eee--ccccCeEEEEEeCCCCEEEEEe---cCCeEEEEEccCCcccccCCCCCCCCcceE-EeEEEecccc
Q psy12614 231 GKTGVQWS-DVK--THKKDILALTVSEDENYLYCAG---VDPTVVCFQRTRKPQVCSTSGPEQGSSVWV-RSVNRVIHEG 303 (708)
Q Consensus 231 ~~~~~~~~-~~~--~~~~~i~~~~~s~~~~~l~~~~---~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~ 303 (708)
..+++... .+. .....|..+.+||||.+++... .++.|.+--+.. .......... ..........
T Consensus 95 ~~~g~~~~~~v~~~~~~~~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V~r--------~~~g~~~~l~~~~~~~~~~~~ 166 (253)
T PF10647_consen 95 SASGTGEPVEVDWPGLRGRITALRVSPDGTRVAVVVEDGGGGRVYVAGVVR--------DGDGVPRRLTGPRRVAPPLLS 166 (253)
T ss_pred cCCCcceeEEecccccCCceEEEEECCCCcEEEEEEecCCCCeEEEEEEEe--------CCCCCcceeccceEecccccC
Confidence 33333221 121 1122899999999999888665 346777776654 2100000110 1122223356
Q ss_pred ceEEEEEe-CCEEEE-EcC-CCeEEE-EeCCCCceeecCccCCCCceEEEEcCCcEEEEEcCCeE
Q psy12614 304 DVKSLALH-GNRLYS-GGL-DSYLSL-SYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHL 364 (708)
Q Consensus 304 ~v~~l~~~-~~~l~s-~~~-d~~i~i-w~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i 364 (708)
.+..+.|. +..|+. +.. ++.+.. ..........+.........++...+...++...++.+
T Consensus 167 ~v~~v~W~~~~~L~V~~~~~~~~~~~~v~~dG~~~~~l~~~~~~~~v~a~~~~~~~~~~t~~~~~ 231 (253)
T PF10647_consen 167 DVTDVAWSDDSTLVVLGRSAGGPVVRLVSVDGGPSTPLPSVNLGVPVVAVAASPSTVYVTDDGGV 231 (253)
T ss_pred cceeeeecCCCEEEEEeCCCCCceeEEEEccCCcccccCCCCCCcceEEeeCCCcEEEEECCCcE
Confidence 78999999 444443 333 332333 44444444443323344455555555555555444443
|
It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues. |
| >KOG2280|consensus | Back alignment and domain information |
|---|
Probab=96.10 E-value=0.79 Score=48.07 Aligned_cols=162 Identities=9% Similarity=0.036 Sum_probs=84.9
Q ss_pred CceEEEEeCCCCcEEEEEcCCceEEEEEEecCCcceeEEeecCCcccccceeEEEEEecCCCeEEEEecCCcEEEecCCC
Q psy12614 404 ATIRCSVVSNDGKYVAYSTESCVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVLISADSTLLLAVSLNGPLYIIDLSS 483 (708)
Q Consensus 404 ~~i~~~~~s~~g~~l~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~~~~~dg~i~~~~~~~ 483 (708)
..+..+.|+.+..+|++..+|++.+|++-.. ......+. .+.. ...|..+.|..+|- ++-..+|.++.+....
T Consensus 84 ~~lI~mgWs~~eeLI~v~k~g~v~Vy~~~ge--~ie~~svg-~e~~--~~~I~ec~~f~~GV--avlt~~g~v~~i~~~~ 156 (829)
T KOG2280|consen 84 GELIGMGWSDDEELICVQKDGTVHVYGLLGE--FIESNSVG-FESQ--MSDIVECRFFHNGV--AVLTVSGQVILINGVE 156 (829)
T ss_pred CCeeeecccCCceEEEEeccceEEEeecchh--hhcccccc-cccc--cCceeEEEEecCce--EEEecCCcEEEEcCCC
Confidence 3778899999999999999999999998752 11111110 0111 22343355555553 3344556655555443
Q ss_pred eEEEEEecCCCCCccCcceEEEEECCCCc---EEEEEecCCeEEEEECCcee---eecCCCCCCceEEEEcCCCCEEEEE
Q psy12614 484 LEIKYCVDPYKSNLMSDVISLVQMSECKQ---YIVCADRKSHVVIWKNGQHH---ASLPRYRKPSTAMAIHPTLSTLVTV 557 (708)
Q Consensus 484 ~~~~~~~~~~~~~~~~~~i~~~~~s~~~~---~l~~~~~d~~i~iw~~~~~~---~~~~~~~~~v~~l~~s~d~~~l~~~ 557 (708)
...+..++..++. ...-+|-..-++++ .++-....-...++-.+... ..+....+.+..+..||+.++|+-=
T Consensus 157 ~~~~~~~~diP~~--~~~~~~Wt~~~~~~~~~~ll~v~~~v~~~~~q~~~~~~q~~~~~~~~~~~~ki~VS~n~~~laLy 234 (829)
T KOG2280|consen 157 EPKLRKMPDIPYN--ELPKSCWTVFQPHRQSTILLDVDVAVGLHICQVEESRVQLHALSWPNSSVVKISVSPNRRFLALY 234 (829)
T ss_pred cchhhhCCCCCCc--cCCCcceeEecCCCcceeEEeechhhhhcccceecccccccccCCCCceEEEEEEcCCcceEEEE
Confidence 3334444433333 11112222222211 11111100001111111111 1222224678889999999999999
Q ss_pred ecCCcEEEEEcCCCCCC
Q psy12614 558 YSDHRIVEFDLNRKAFT 574 (708)
Q Consensus 558 ~~dg~i~vwd~~~~~~~ 574 (708)
..+|.|.+-+.+..+..
T Consensus 235 t~~G~i~~vs~D~~~~l 251 (829)
T KOG2280|consen 235 TETGKIWVVSIDLSQIL 251 (829)
T ss_pred ecCCcEEEEecchhhhh
Confidence 99999998888766543
|
|
| >PHA03098 kelch-like protein; Provisional | Back alignment and domain information |
|---|
Probab=96.07 E-value=0.57 Score=50.15 Aligned_cols=193 Identities=10% Similarity=0.037 Sum_probs=94.8
Q ss_pred cCCCEEEEEeCC------CcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC------eEEEEEcCCCce
Q psy12614 121 KKKRLLAAGTEQ------GHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA------AVRVWDIHKGHA 188 (708)
Q Consensus 121 ~~~~~la~~~~d------~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d------~i~iwd~~~~~~ 188 (708)
.++..++.|+.+ ..+..||..+.+......+.........+. -++...+.||.+ .+..||..+++-
T Consensus 293 ~~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~R~~~~~~~--~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W 370 (534)
T PHA03098 293 LNNVIYFIGGMNKNNLSVNSVVSYDTKTKSWNKVPELIYPRKNPGVTV--FNNRIYVIGGIYNSISLNTVESWKPGESKW 370 (534)
T ss_pred ECCEEEEECCCcCCCCeeccEEEEeCCCCeeeECCCCCcccccceEEE--ECCEEEEEeCCCCCEecceEEEEcCCCCce
Confidence 345566666643 257788888877642222221111122222 256666667643 477888776553
Q ss_pred EEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCC------CcEEEEeCCCCeeEEE--eeccccCeEEEEEeCCCCEE
Q psy12614 189 IHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSG------GFVRFWDGKTGVQWSD--VKTHKKDILALTVSEDENYL 259 (708)
Q Consensus 189 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~d------g~i~~wd~~~~~~~~~--~~~~~~~i~~~~~s~~~~~l 259 (708)
...-..+. ...-.+++. -+++ ++.|+.+ ..+..||..+++-... ++..... .++ ...++...
T Consensus 371 ~~~~~lp~------~r~~~~~~~-~~~~iYv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~-~~~-~~~~~~iy 441 (534)
T PHA03098 371 REEPPLIF------PRYNPCVVN-VNNLIYVIGGISKNDELLKTVECFSLNTNKWSKGSPLPISHYG-GCA-IYHDGKIY 441 (534)
T ss_pred eeCCCcCc------CCccceEEE-ECCEEEEECCcCCCCcccceEEEEeCCCCeeeecCCCCccccC-ceE-EEECCEEE
Confidence 32111110 111112222 2555 5566532 4588899876543221 1111111 122 22355566
Q ss_pred EEEecCC--------eEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEeCCEEEEEcCC-----CeEEE
Q psy12614 260 YCAGVDP--------TVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALHGNRLYSGGLD-----SYLSL 326 (708)
Q Consensus 260 ~~~~~dg--------~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~s~~~d-----~~i~i 326 (708)
+.||.++ .+.+||..+ + .|.....+.........+.+.+..++.||.+ ..+.+
T Consensus 442 v~GG~~~~~~~~~~~~v~~yd~~~--------~------~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~ 507 (534)
T PHA03098 442 VIGGISYIDNIKVYNIVESYNPVT--------N------KWTELSSLNFPRINASLCIFNNKIYVVGGDKYEYYINEIEV 507 (534)
T ss_pred EECCccCCCCCcccceEEEecCCC--------C------ceeeCCCCCcccccceEEEECCEEEEEcCCcCCcccceeEE
Confidence 6665431 377888776 3 4654443322222222233336666667654 46788
Q ss_pred EeCCCCceeecC
Q psy12614 327 SYYPPKTLVKYP 338 (708)
Q Consensus 327 w~~~~~~~~~~~ 338 (708)
||..+.....+.
T Consensus 508 yd~~~~~W~~~~ 519 (534)
T PHA03098 508 YDDKTNTWTLFC 519 (534)
T ss_pred EeCCCCEEEecC
Confidence 888877755554
|
|
| >PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea | Back alignment and domain information |
|---|
Probab=96.06 E-value=1.7 Score=43.02 Aligned_cols=110 Identities=12% Similarity=0.048 Sum_probs=50.9
Q ss_pred CCCEEEEecCC--eEEEEEcCC----CceEEEEEecccCCCCCceeEEEEEEccCCE-EEEE--cC----CCcEEEEeCC
Q psy12614 166 SGDYLVTGCAA--AVRVWDIHK----GHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITG--DS----GGFVRFWDGK 232 (708)
Q Consensus 166 d~~~l~~~~~d--~i~iwd~~~----~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~--~~----dg~i~~wd~~ 232 (708)
+.++|+..+-+ .|.|.|+.+ .+..+.+....-..-..-.....+-..|+|. ++++ +. -|.+.++|-+
T Consensus 86 ~Rr~Li~PgL~SsrIyviD~~~dPr~P~l~KvIe~~ev~~k~g~s~PHT~Hclp~G~imIS~lGd~~G~g~Ggf~llD~~ 165 (461)
T PF05694_consen 86 ERRYLILPGLRSSRIYVIDTKTDPRKPRLHKVIEPEEVFEKTGLSRPHTVHCLPDGRIMISALGDADGNGPGGFVLLDGE 165 (461)
T ss_dssp -S-EEEEEBTTT--EEEEE--S-TTS-EEEEEE-HHHHHHHH-EEEEEEEEE-SS--EEEEEEEETTS-S--EEEEE-TT
T ss_pred cCCcEEeeeeccCcEEEEECCCCCCCCceEeeeCHHHHHhhcCCCCCceeeecCCccEEEEeccCCCCCCCCcEEEEcCc
Confidence 45788877755 999999874 2333333321000000012334455567885 4432 22 2568889988
Q ss_pred CCeeEEEeecc---ccCeEEEEEeCCCCEEEEEe--------------------cCCeEEEEEccC
Q psy12614 233 TGVQWSDVKTH---KKDILALTVSEDENYLYCAG--------------------VDPTVVCFQRTR 275 (708)
Q Consensus 233 ~~~~~~~~~~~---~~~i~~~~~s~~~~~l~~~~--------------------~dg~i~iw~~~~ 275 (708)
+.+........ ...-..+-|.|..+.+++.. ....+.+||+.+
T Consensus 166 tf~v~g~We~~~~~~~~gYDfw~qpr~nvMiSSeWg~P~~~~~Gf~~~d~~~~~yG~~l~vWD~~~ 231 (461)
T PF05694_consen 166 TFEVKGRWEKDRGPQPFGYDFWYQPRHNVMISSEWGAPSMFEKGFNPEDLEAGKYGHSLHVWDWST 231 (461)
T ss_dssp T--EEEE--SB-TT------EEEETTTTEEEE-B---HHHHTT---TTTHHHH-S--EEEEEETTT
T ss_pred cccccceeccCCCCCCCCCCeEEcCCCCEEEEeccCChhhcccCCChhHhhcccccCeEEEEECCC
Confidence 77777666532 22335677888888888763 235899999998
|
The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A. |
| >PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length | Back alignment and domain information |
|---|
Probab=96.05 E-value=0.38 Score=50.63 Aligned_cols=113 Identities=13% Similarity=0.199 Sum_probs=77.2
Q ss_pred ceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEE--CCCCCEEEEecCC-eEEEEEcC-----
Q psy12614 113 TCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAW--HSSGDYLVTGCAA-AVRVWDIH----- 184 (708)
Q Consensus 113 ~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~--s~d~~~l~~~~~d-~i~iwd~~----- 184 (708)
...-+.-|.-++.-++-+....+.|||...+.+.+...+ ...+.|.++.| .||++.+++.|-. .|.++.-.
T Consensus 31 ~~~li~gss~~k~a~V~~~~~~LtIWD~~~~~lE~~~~f-~~~~~I~dLDWtst~d~qsiLaVGf~~~v~l~~Q~R~dy~ 109 (631)
T PF12234_consen 31 NPSLISGSSIKKIAVVDSSRSELTIWDTRSGVLEYEESF-SEDDPIRDLDWTSTPDGQSILAVGFPHHVLLYTQLRYDYT 109 (631)
T ss_pred CcceEeecccCcEEEEECCCCEEEEEEcCCcEEEEeeee-cCCCceeeceeeecCCCCEEEEEEcCcEEEEEEccchhhh
Confidence 444455555444444444456799999999998877777 45678999988 5789998888888 88887532
Q ss_pred ----CCceEEEEEecccCCCCCceeEEEEEEccCCEEEEEcCCCcEEEEeC
Q psy12614 185 ----KGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDG 231 (708)
Q Consensus 185 ----~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~wd~ 231 (708)
+-..++++.... -...+|.+..|.++|.+++|+. +++.++|-
T Consensus 110 ~~~p~w~~i~~i~i~~----~T~h~Igds~Wl~~G~LvV~sG-Nqlfv~dk 155 (631)
T PF12234_consen 110 NKGPSWAPIRKIDISS----HTPHPIGDSIWLKDGTLVVGSG-NQLFVFDK 155 (631)
T ss_pred cCCcccceeEEEEeec----CCCCCccceeEecCCeEEEEeC-CEEEEECC
Confidence 123444544431 1136788999999998777664 56888874
|
This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits. |
| >KOG4499|consensus | Back alignment and domain information |
|---|
Probab=95.92 E-value=1.2 Score=39.72 Aligned_cols=205 Identities=16% Similarity=0.112 Sum_probs=112.0
Q ss_pred CCEEEEEcCCCcEEEEECCCCeEeE-EEeecCCceEEEEEecCC--CEEEEE-eCCCcEEEEEccCCcEEEEEecc----
Q psy12614 81 NDRLFSGGLQGFVNEYDMRRLNIKS-STAVTSGTCWCLSVHKKK--RLLAAG-TEQGHINLFQISDEGLLYEKLLD---- 152 (708)
Q Consensus 81 ~~~l~s~~~d~~i~vwd~~~~~~~~-~~~~~~~~v~~~~~s~~~--~~la~~-~~d~~i~iwd~~~~~~~~~~~~~---- 152 (708)
+..+.+--..|.|.-||+.+.+..+ ++.+ .+..++.+--.+ +-.+++ +..-.|.-||-.....+..+++.
T Consensus 27 ~sLl~VDi~ag~v~r~D~~qn~v~ra~ie~--p~~ag~ilpv~~~~q~~~v~~G~kf~i~nwd~~~~~a~v~~t~~ev~~ 104 (310)
T KOG4499|consen 27 QSLLYVDIEAGEVHRYDIEQNKVYRAKIEG--PPSAGFILPVEGGPQEFAVGCGSKFVIVNWDGVSESAKVYRTLFEVQP 104 (310)
T ss_pred ceEEEEEeccCceehhhhhhhheEEEEEec--CcceeEEEEecCCCceEEEeecceEEEEEcccccceeeeeeeccccCc
Confidence 4444444456677778888754332 2332 223344443322 123333 33333445663332222112211
Q ss_pred -cccccEEEEEECCCCCEEEEecCC-e---------EEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE--EEE
Q psy12614 153 -RQQGRILCTAWHSSGDYLVTGCAA-A---------VRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT--IIT 219 (708)
Q Consensus 153 -~~~~~v~~~~~s~d~~~l~~~~~d-~---------i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--l~~ 219 (708)
....+...-..+|+|++.+-.-.+ . ++.|- -+..+..+. ..-..-+.++|+.|.+ .++
T Consensus 105 d~kknR~NDgkvdP~Gryy~GtMad~~~~le~~~g~Ly~~~--~~h~v~~i~-------~~v~IsNgl~Wd~d~K~fY~i 175 (310)
T KOG4499|consen 105 DRKKNRLNDGKVDPDGRYYGGTMADFGDDLEPIGGELYSWL--AGHQVELIW-------NCVGISNGLAWDSDAKKFYYI 175 (310)
T ss_pred hHHhcccccCccCCCCceeeeeeccccccccccccEEEEec--cCCCceeee-------hhccCCccccccccCcEEEEE
Confidence 123456666788999985543333 1 22222 122222221 1123335678887764 445
Q ss_pred EcCCCcEEEEe--CCCCee-----EEEeec----cccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCC
Q psy12614 220 GDSGGFVRFWD--GKTGVQ-----WSDVKT----HKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQG 288 (708)
Q Consensus 220 ~~~dg~i~~wd--~~~~~~-----~~~~~~----~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~ 288 (708)
-+.+-.|.-|| ..+|.. +..++. .....-.+++..+|++.++.-..++|...|..+ |+
T Consensus 176 Dsln~~V~a~dyd~~tG~~snr~~i~dlrk~~~~e~~~PDGm~ID~eG~L~Va~~ng~~V~~~dp~t--------GK--- 244 (310)
T KOG4499|consen 176 DSLNYEVDAYDYDCPTGDLSNRKVIFDLRKSQPFESLEPDGMTIDTEGNLYVATFNGGTVQKVDPTT--------GK--- 244 (310)
T ss_pred ccCceEEeeeecCCCcccccCcceeEEeccCCCcCCCCCCcceEccCCcEEEEEecCcEEEEECCCC--------Cc---
Confidence 55667787777 555543 222221 112224566677888888888889999999999 87
Q ss_pred CcceEEeEEEeccccceEEEEEeC
Q psy12614 289 SSVWVRSVNRVIHEGDVKSLALHG 312 (708)
Q Consensus 289 ~~~~~~~~~~~~~~~~v~~l~~~~ 312 (708)
.+..+......|++++|-|
T Consensus 245 -----~L~eiklPt~qitsccFgG 263 (310)
T KOG4499|consen 245 -----ILLEIKLPTPQITSCCFGG 263 (310)
T ss_pred -----EEEEEEcCCCceEEEEecC
Confidence 6777777799999999984
|
|
| >PHA03098 kelch-like protein; Provisional | Back alignment and domain information |
|---|
Probab=95.90 E-value=0.54 Score=50.36 Aligned_cols=184 Identities=12% Similarity=0.068 Sum_probs=88.8
Q ss_pred CCEEEEEcCCC------cEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCC-----CcEEEEEccCCcEEEEE
Q psy12614 81 NDRLFSGGLQG------FVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQ-----GHINLFQISDEGLLYEK 149 (708)
Q Consensus 81 ~~~l~s~~~d~------~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d-----~~i~iwd~~~~~~~~~~ 149 (708)
+..++.||.++ .+..||..+.+-...-..........+..-++...+.|+.+ ..+..||..++......
T Consensus 295 ~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~R~~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~ 374 (534)
T PHA03098 295 NVIYFIGGMNKNNLSVNSVVSYDTKTKSWNKVPELIYPRKNPGVTVFNNRIYVIGGIYNSISLNTVESWKPGESKWREEP 374 (534)
T ss_pred CEEEEECCCcCCCCeeccEEEEeCCCCeeeECCCCCcccccceEEEECCEEEEEeCCCCCEecceEEEEcCCCCceeeCC
Confidence 55556666432 57788887765422111110111111222366777777764 34778888887764322
Q ss_pred ecccccccEEEEEECCCCCEEEEecC-------CeEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEc
Q psy12614 150 LLDRQQGRILCTAWHSSGDYLVTGCA-------AAVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGD 221 (708)
Q Consensus 150 ~~~~~~~~v~~~~~s~d~~~l~~~~~-------d~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~ 221 (708)
.+...... .+++. -+++..+.|+. +.+..||..+++-...-..+. ...-.+++ ..+++ ++.|+
T Consensus 375 ~lp~~r~~-~~~~~-~~~~iYv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~------~r~~~~~~-~~~~~iyv~GG 445 (534)
T PHA03098 375 PLIFPRYN-PCVVN-VNNLIYVIGGISKNDELLKTVECFSLNTNKWSKGSPLPI------SHYGGCAI-YHDGKIYVIGG 445 (534)
T ss_pred CcCcCCcc-ceEEE-ECCEEEEECCcCCCCcccceEEEEeCCCCeeeecCCCCc------cccCceEE-EECCEEEEECC
Confidence 22211111 12222 24566666662 247888987655332211110 11111222 23555 55565
Q ss_pred CC--------CcEEEEeCCCCeeEEE--eeccccCeEEEEEeCCCCEEEEEecC-----CeEEEEEccC
Q psy12614 222 SG--------GFVRFWDGKTGVQWSD--VKTHKKDILALTVSEDENYLYCAGVD-----PTVVCFQRTR 275 (708)
Q Consensus 222 ~d--------g~i~~wd~~~~~~~~~--~~~~~~~i~~~~~s~~~~~l~~~~~d-----g~i~iw~~~~ 275 (708)
.+ ..+.+||..+++-... +.........+. -+++.++.|+.+ +.+.+||..+
T Consensus 446 ~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~v~~yd~~~ 512 (534)
T PHA03098 446 ISYIDNIKVYNIVESYNPVTNKWTELSSLNFPRINASLCI--FNNKIYVVGGDKYEYYINEIEVYDDKT 512 (534)
T ss_pred ccCCCCCcccceEEEecCCCCceeeCCCCCcccccceEEE--ECCEEEEEcCCcCCcccceeEEEeCCC
Confidence 42 2388899877643222 221111112222 256666677654 4688888877
|
|
| >PRK10115 protease 2; Provisional | Back alignment and domain information |
|---|
Probab=95.89 E-value=3.6 Score=45.22 Aligned_cols=235 Identities=9% Similarity=0.097 Sum_probs=119.9
Q ss_pred CcEEEEEEcCCCCEEEEEeC-----CCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcC-C-----CcE
Q psy12614 27 KVINCIACEPKSSRLAVSRA-----DQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGL-Q-----GFV 93 (708)
Q Consensus 27 ~~v~~~~~s~~~~~la~~~~-----dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~-d-----~~i 93 (708)
-.+..+.+||||++||.+.. ...|.+-|+.++..+...+.+ . -..++|. ++.|+.... + ..|
T Consensus 127 ~~l~~~~~Spdg~~la~~~d~~G~E~~~l~v~d~~tg~~l~~~i~~-~----~~~~~w~~D~~~~~y~~~~~~~~~~~~v 201 (686)
T PRK10115 127 YTLGGMAITPDNTIMALAEDFLSRRQYGIRFRNLETGNWYPELLDN-V----EPSFVWANDSWTFYYVRKHPVTLLPYQV 201 (686)
T ss_pred EEEeEEEECCCCCEEEEEecCCCcEEEEEEEEECCCCCCCCccccC-c----ceEEEEeeCCCEEEEEEecCCCCCCCEE
Confidence 34777899999999997633 234889999888754323322 1 1458898 555554432 2 468
Q ss_pred EEEECCCC--eEeEEEeecCCceE-EEEEecCCCEEEEEeC---CCcEEEEEcc--CCcEEEEEecccccccEEEEEECC
Q psy12614 94 NEYDMRRL--NIKSSTAVTSGTCW-CLSVHKKKRLLAAGTE---QGHINLFQIS--DEGLLYEKLLDRQQGRILCTAWHS 165 (708)
Q Consensus 94 ~vwd~~~~--~~~~~~~~~~~~v~-~~~~s~~~~~la~~~~---d~~i~iwd~~--~~~~~~~~~~~~~~~~v~~~~~s~ 165 (708)
..+++.++ +-...+........ ....+.|+++++..+. ++.+.+++.. .+... ..+....+....+. +.
T Consensus 202 ~~h~lgt~~~~d~lv~~e~~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~-~~ 278 (686)
T PRK10115 202 WRHTIGTPASQDELVYEEKDDTFYVSLHKTTSKHYVVIHLASATTSEVLLLDAELADAEPF--VFLPRRKDHEYSLD-HY 278 (686)
T ss_pred EEEECCCChhHCeEEEeeCCCCEEEEEEEcCCCCEEEEEEECCccccEEEEECcCCCCCce--EEEECCCCCEEEEE-eC
Confidence 88898887 33334443333333 3344558887665433 4578888853 33322 11222222222222 22
Q ss_pred CCCEEEEecCC----eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEEEEcCCCcEE--EEeCCCCeeEEE
Q psy12614 166 SGDYLVTGCAA----AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVR--FWDGKTGVQWSD 239 (708)
Q Consensus 166 d~~~l~~~~~d----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~--~wd~~~~~~~~~ 239 (708)
.+.+.+....+ .|...++.+......+... .....+..+.+..+.-+++...+|.-+ +++..++ .+..
T Consensus 279 ~~~ly~~tn~~~~~~~l~~~~~~~~~~~~~l~~~-----~~~~~i~~~~~~~~~l~~~~~~~g~~~l~~~~~~~~-~~~~ 352 (686)
T PRK10115 279 QHRFYLRSNRHGKNFGLYRTRVRDEQQWEELIPP-----RENIMLEGFTLFTDWLVVEERQRGLTSLRQINRKTR-EVIG 352 (686)
T ss_pred CCEEEEEEcCCCCCceEEEecCCCcccCeEEECC-----CCCCEEEEEEEECCEEEEEEEeCCEEEEEEEcCCCC-ceEE
Confidence 33333333222 4444455421122222222 113467888887554456666666544 4554333 3333
Q ss_pred ee-ccccCeEEEEEe--CCCC-EEEEEec---CCeEEEEEccC
Q psy12614 240 VK-THKKDILALTVS--EDEN-YLYCAGV---DPTVVCFQRTR 275 (708)
Q Consensus 240 ~~-~~~~~i~~~~~s--~~~~-~l~~~~~---dg~i~iw~~~~ 275 (708)
+. .....+..+.++ +++. .+++.+. -+.+..+|..+
T Consensus 353 l~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~y~~d~~~ 395 (686)
T PRK10115 353 IAFDDPAYVTWIAYNPEPETSRLRYGYSSMTTPDTLFELDMDT 395 (686)
T ss_pred ecCCCCceEeeecccCCCCCceEEEEEecCCCCCEEEEEECCC
Confidence 33 222223333344 3443 3333322 35777888776
|
|
| >TIGR03118 PEPCTERM_chp_1 conserved hypothetical protein TIGR03118 | Back alignment and domain information |
|---|
Probab=95.84 E-value=1.6 Score=40.81 Aligned_cols=208 Identities=13% Similarity=0.176 Sum_probs=120.7
Q ss_pred EEEEEEcCCCCEEEEEeCCCcEEEEeCC------CCCeEEEEEecCC---CCCcEEEEEEe--CC------------EEE
Q psy12614 29 INCIACEPKSSRLAVSRADQSIEIWDIS------ETPHVDRVFIGDP---LSNSIECLTWF--ND------------RLF 85 (708)
Q Consensus 29 v~~~~~s~~~~~la~~~~dg~v~iwd~~------~~~~~~~~~~~h~---~~~~v~~l~~~--~~------------~l~ 85 (708)
-..|+|+|.+.+-++....+...+||.. ....+...++... -....+.+.|+ .. .++
T Consensus 25 ~WGia~~p~~~~WVadngT~~~TlYdg~~~~~~g~~~~L~vtiP~~~~~~~~~~PTGiVfN~~~~F~vt~~g~~~~a~Fi 104 (336)
T TIGR03118 25 AWGLSYRPGGPFWVANTGTGTATLYVGNPDTQPLVQDPLVVVIPAPPPLAAEGTPTGQVFNGSDTFVVSGEGITGPSRFL 104 (336)
T ss_pred cceeEecCCCCEEEecCCcceEEeecCCcccccCCccceEEEecCCCCCCCCCCccEEEEeCCCceEEcCCCcccceeEE
Confidence 4579999999888887778899999997 2223333444311 02568888888 22 357
Q ss_pred EEcCCCcEEEEECCCCeE-----eEEEe-ecCCc-eEEEEEecC--CCEEEEE-eCCCcEEEEEccCCcEEEEEecccc-
Q psy12614 86 SGGLQGFVNEYDMRRLNI-----KSSTA-VTSGT-CWCLSVHKK--KRLLAAG-TEQGHINLFQISDEGLLYEKLLDRQ- 154 (708)
Q Consensus 86 s~~~d~~i~vwd~~~~~~-----~~~~~-~~~~~-v~~~~~s~~--~~~la~~-~~d~~i~iwd~~~~~~~~~~~~~~~- 154 (708)
.+++||+|.-|...-+.. ...+. ...+. ...+++... +.+|..+ -..++|.++|-.-........+...
T Consensus 105 f~tEdGTisaW~p~v~~t~~~~~~~~~d~s~~gavYkGLAi~~~~~~~~LYaadF~~g~IDVFd~~f~~~~~~g~F~DP~ 184 (336)
T TIGR03118 105 FVTEDGTLSGWAPALGTTRMTRAEIVVDASQQGNVYKGLAVGPTGGGDYLYAANFRQGRIDVFKGSFRPPPLPGSFIDPA 184 (336)
T ss_pred EEeCCceEEeecCcCCcccccccEEEEccCCCcceeeeeEEeecCCCceEEEeccCCCceEEecCccccccCCCCccCCC
Confidence 788999999998533222 11222 11233 344565543 4555544 4578899998553322100001000
Q ss_pred ------cccEE------EEEE---CCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccC----
Q psy12614 155 ------QGRIL------CTAW---HSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCAD---- 214 (708)
Q Consensus 155 ------~~~v~------~~~~---s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---- 214 (708)
.-.|. .+.| .++.+.=+.+..- .|-++|. +|..++++... +.-...+.|+..|-
T Consensus 185 iPagyAPFnIqnig~~lyVtYA~qd~~~~d~v~G~G~G~VdvFd~-~G~l~~r~as~-----g~LNaPWG~a~APa~FG~ 258 (336)
T TIGR03118 185 LPAGYAPFNVQNLGGTLYVTYAQQDADRNDEVAGAGLGYVNVFTL-NGQLLRRVASS-----GRLNAPWGLAIAPESFGS 258 (336)
T ss_pred CCCCCCCcceEEECCeEEEEEEecCCcccccccCCCcceEEEEcC-CCcEEEEeccC-----CcccCCceeeeChhhhCC
Confidence 00011 1111 2222221222222 6889996 58888888654 33566788888763
Q ss_pred --CEEEEEc-CCCcEEEEeCCCCeeEEEeec
Q psy12614 215 --FTIITGD-SGGFVRFWDGKTGVQWSDVKT 242 (708)
Q Consensus 215 --~~l~~~~-~dg~i~~wd~~~~~~~~~~~~ 242 (708)
|.|++|. .||+|..||..+++.+..+..
T Consensus 259 ~sg~lLVGNFGDG~InaFD~~sG~~~g~L~~ 289 (336)
T TIGR03118 259 LSGALLVGNFGDGTINAYDPQSGAQLGQLLD 289 (336)
T ss_pred CCCCeEEeecCCceeEEecCCCCceeeeecC
Confidence 3455554 499999999999988877754
|
This model describes and uncharacterized conserved hypothetical protein. Members are found with the C-terminal putative exosortase interaction domain, PEP-CTERM, in Nitrosospira multiformis, Rhodoferax ferrireducens, Solibacter usitatus Ellin6076, and Acidobacteria bacterium Ellin345. It is found without the PEP-CTERM domain in several other species, including Burkholderia ambifaria, Gloeobacter violaceus PCC 7421, and three copies in the Acanthamoeba polyphaga mimivirus. |
| >PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases | Back alignment and domain information |
|---|
Probab=95.72 E-value=2.4 Score=41.87 Aligned_cols=234 Identities=10% Similarity=0.048 Sum_probs=113.0
Q ss_pred cEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCe--EEEEE----ecCCCCCcEEEEEEe-----CCEEEEEcCC------
Q psy12614 28 VINCIACEPKSSRLAVSRADQSIEIWDISETPH--VDRVF----IGDPLSNSIECLTWF-----NDRLFSGGLQ------ 90 (708)
Q Consensus 28 ~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~--~~~~~----~~h~~~~~v~~l~~~-----~~~l~s~~~d------ 90 (708)
.-+.|+|.|||+++++ ...|.|.+++ ..+.. ....+ .... .....++++ ..+|......
T Consensus 3 ~P~~~a~~pdG~l~v~-e~~G~i~~~~-~~g~~~~~v~~~~~v~~~~~--~gllgia~~p~f~~n~~lYv~~t~~~~~~~ 78 (331)
T PF07995_consen 3 NPRSMAFLPDGRLLVA-ERSGRIWVVD-KDGSLKTPVADLPEVFADGE--RGLLGIAFHPDFASNGYLYVYYTNADEDGG 78 (331)
T ss_dssp SEEEEEEETTSCEEEE-ETTTEEEEEE-TTTEECEEEEE-TTTBTSTT--BSEEEEEE-TTCCCC-EEEEEEEEE-TSSS
T ss_pred CceEEEEeCCCcEEEE-eCCceEEEEe-CCCcCcceeccccccccccc--CCcccceeccccCCCCEEEEEEEcccCCCC
Confidence 3578999999987765 5599999999 44333 11122 1223 678999999 2555544431
Q ss_pred ---CcEEEEECCCC--e-----Ee-EEEee---cCCceEEEEEecCCCEEEEEeCCCc-------------EEEEEccCC
Q psy12614 91 ---GFVNEYDMRRL--N-----IK-SSTAV---TSGTCWCLSVHKKKRLLAAGTEQGH-------------INLFQISDE 143 (708)
Q Consensus 91 ---~~i~vwd~~~~--~-----~~-~~~~~---~~~~v~~~~~s~~~~~la~~~~d~~-------------i~iwd~~~~ 143 (708)
..|.-|....+ . .+ ..+.. ....-..|+|.|||.+.++.+..+. |.-.+.. +
T Consensus 79 ~~~~~v~r~~~~~~~~~~~~~~~l~~~~p~~~~~~H~g~~l~fgpDG~LYvs~G~~~~~~~~~~~~~~~G~ilri~~d-G 157 (331)
T PF07995_consen 79 DNDNRVVRFTLSDGDGDLSSEEVLVTGLPDTSSGNHNGGGLAFGPDGKLYVSVGDGGNDDNAQDPNSLRGKILRIDPD-G 157 (331)
T ss_dssp SEEEEEEEEEEETTSCEEEEEEEEEEEEES-CSSSS-EEEEEE-TTSEEEEEEB-TTTGGGGCSTTSSTTEEEEEETT-S
T ss_pred CcceeeEEEeccCCccccccceEEEEEeCCCCCCCCCCccccCCCCCcEEEEeCCCCCcccccccccccceEEEeccc-C
Confidence 24555555443 1 11 11122 2234567999999976666554332 2222222 1
Q ss_pred cEEE------------EEecccccccEEEEEECCC-CCEEEEe-cCC---eEEEEEcCCCceE-----------E--EEE
Q psy12614 144 GLLY------------EKLLDRQQGRILCTAWHSS-GDYLVTG-CAA---AVRVWDIHKGHAI-----------H--KMS 193 (708)
Q Consensus 144 ~~~~------------~~~~~~~~~~v~~~~~s~d-~~~l~~~-~~d---~i~iwd~~~~~~~-----------~--~~~ 193 (708)
.... ..--.++. ....++|.|. |.+.++= +.+ .|.+. ..|.-. . .+.
T Consensus 158 ~~p~dnP~~~~~~~~~~i~A~GlR-N~~~~~~d~~tg~l~~~d~G~~~~dein~i--~~G~nYGWP~~~~~~~~~~~~~~ 234 (331)
T PF07995_consen 158 SIPADNPFVGDDGADSEIYAYGLR-NPFGLAFDPNTGRLWAADNGPDGWDEINRI--EPGGNYGWPYCEGGPKYSGPPIG 234 (331)
T ss_dssp SB-TTSTTTTSTTSTTTEEEE--S-EEEEEEEETTTTEEEEEEE-SSSSEEEEEE---TT-B--TTTBSSSCSTTSS-EC
T ss_pred cCCCCCccccCCCceEEEEEeCCC-ccccEEEECCCCcEEEEccCCCCCcEEEEe--ccCCcCCCCCCcCCCCCCCCccc
Confidence 1000 00001112 2457788888 5544432 222 23322 111100 0 000
Q ss_pred ecc--------cCCCCCceeEEEEEEcc-------CCEEEEE-cCCCcEEEEeCCCCeeEEE----eeccccCeEEEEEe
Q psy12614 194 LDK--------SSKFSKNTAVWCVAFCA-------DFTIITG-DSGGFVRFWDGKTGVQWSD----VKTHKKDILALTVS 253 (708)
Q Consensus 194 ~~~--------~~~~~~~~~v~~~~~~~-------~~~l~~~-~~dg~i~~wd~~~~~~~~~----~~~~~~~i~~~~~s 253 (708)
... ...+.+...+..+.|.. .|.++.+ -..+.|....++.+..+.. +......+..+++.
T Consensus 235 ~~~~~~~~~~P~~~~~~~~ap~G~~~y~g~~fp~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~r~~~v~~~ 314 (331)
T PF07995_consen 235 DAPSCPGFVPPVFAYPPHSAPTGIIFYRGSAFPEYRGDLFVADYGGGRIWRLDLDEDGSVTEEEEFLGGFGGRPRDVAQG 314 (331)
T ss_dssp TGSS-TTS---SEEETTT--EEEEEEE-SSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEEECTTSSS-EEEEEEE
T ss_pred cccCCCCcCccceeecCccccCceEEECCccCccccCcEEEecCCCCEEEEEeeecCCCccceEEccccCCCCceEEEEc
Confidence 000 00012234566666653 3444444 4456788877765533221 22344478999999
Q ss_pred CCCCEEEEEecCCeEE
Q psy12614 254 EDENYLYCAGVDPTVV 269 (708)
Q Consensus 254 ~~~~~l~~~~~dg~i~ 269 (708)
|||.+.++.+.+|.|+
T Consensus 315 pDG~Lyv~~d~~G~iy 330 (331)
T PF07995_consen 315 PDGALYVSDDSDGKIY 330 (331)
T ss_dssp TTSEEEEEE-TTTTEE
T ss_pred CCCeEEEEECCCCeEe
Confidence 9998888888788764
|
The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B .... |
| >COG5276 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=95.47 E-value=2.1 Score=39.62 Aligned_cols=154 Identities=16% Similarity=0.068 Sum_probs=93.8
Q ss_pred ceeEEEEEEccCCEEEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccC
Q psy12614 203 NTAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCST 282 (708)
Q Consensus 203 ~~~v~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~ 282 (708)
...+..+.++.+ ....+..+.-+++.|+.+......+..-.-.=..-.+.-.|++..++..|.-+.+.|+.+
T Consensus 86 ~~l~~Dv~vse~-yvyvad~ssGL~IvDIS~P~sP~~~~~lnt~gyaygv~vsGn~aYVadlddgfLivdvsd------- 157 (370)
T COG5276 86 RDLFADVRVSEE-YVYVADWSSGLRIVDISTPDSPTLIGFLNTDGYAYGVYVSGNYAYVADLDDGFLIVDVSD------- 157 (370)
T ss_pred hhhhheeEeccc-EEEEEcCCCceEEEeccCCCCcceeccccCCceEEEEEecCCEEEEeeccCcEEEEECCC-------
Confidence 455666777644 355566677799999987644332221111112233444688999999888889999987
Q ss_pred CCCCCCCcceEEeEEEeccccceEEEEEeCCEEEEEcCCCeEEEEeCCCCceeecCc---cCCCCceEEEEcCCcEEEEE
Q psy12614 283 SGPEQGSSVWVRSVNRVIHEGDVKSLALHGNRLYSGGLDSYLSLSYYPPKTLVKYPC---TLAQSTPVSLAKDIQHVLLQ 359 (708)
Q Consensus 283 ~g~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~---~~~~~~~~~~s~~~~~l~~~ 359 (708)
.+ +................++.+|++-..+..|+-+.+-|+....-..+.+ ..+...++..+++.-+++..
T Consensus 158 -ps-----sP~lagrya~~~~d~~~v~ISGn~AYvA~~d~GL~ivDVSnp~sPvli~~~n~g~g~~sv~vsdnr~y~vvy 231 (370)
T COG5276 158 -PS-----SPQLAGRYALPGGDTHDVAISGNYAYVAWRDGGLTIVDVSNPHSPVLIGSYNTGPGTYSVSVSDNRAYLVVY 231 (370)
T ss_pred -CC-----CceeeeeeccCCCCceeEEEecCeEEEEEeCCCeEEEEccCCCCCeEEEEEecCCceEEEEecCCeeEEEEc
Confidence 21 1123334445556667888899999999999999999998766333322 22244556666665555544
Q ss_pred cCCeEEEEEecC
Q psy12614 360 YTSHLELWSLGS 371 (708)
Q Consensus 360 ~~~~i~i~~~~~ 371 (708)
.. .+.+-|..+
T Consensus 232 ~e-gvlivd~s~ 242 (370)
T COG5276 232 DE-GVLIVDVSG 242 (370)
T ss_pred cc-ceEEEecCC
Confidence 33 344445444
|
|
| >TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family | Back alignment and domain information |
|---|
Probab=95.45 E-value=5.3 Score=44.10 Aligned_cols=192 Identities=14% Similarity=0.160 Sum_probs=114.9
Q ss_pred CCEEEEEcCCCcEEEEECCCCeEeEEEeecCCc--------eEEEEEec----------------CCCEEEEEeCCCcEE
Q psy12614 81 NDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGT--------CWCLSVHK----------------KKRLLAAGTEQGHIN 136 (708)
Q Consensus 81 ~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~--------v~~~~~s~----------------~~~~la~~~~d~~i~ 136 (708)
++.|+.++.++.|.-.|..+|+.+.++...... .+.+++.. ++..++.++.|+.+.
T Consensus 194 gg~lYv~t~~~~V~ALDa~TGk~lW~~d~~~~~~~~~~~~~cRGvay~~~p~~~~~~~~~~~p~~~~~rV~~~T~Dg~Li 273 (764)
T TIGR03074 194 GDTLYLCTPHNKVIALDAATGKEKWKFDPKLKTEAGRQHQTCRGVSYYDAPAAAAGPAAPAAPADCARRIILPTSDARLI 273 (764)
T ss_pred CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCcccccccccccceEEecCCcccccccccccccccCCEEEEecCCCeEE
Confidence 889999999999999999999998887643211 22233321 344788888999999
Q ss_pred EEEccCCcEEEEEecccccccEE-------------EEEECC--CCCEEEEecC----------C-eEEEEEcCCCceEE
Q psy12614 137 LFQISDEGLLYEKLLDRQQGRIL-------------CTAWHS--SGDYLVTGCA----------A-AVRVWDIHKGHAIH 190 (708)
Q Consensus 137 iwd~~~~~~~~~~~~~~~~~~v~-------------~~~~s~--d~~~l~~~~~----------d-~i~iwd~~~~~~~~ 190 (708)
-.|.++|+.... +. ..+.|. .+.-+| .+..+++++. + .|+-+|+++|+.+.
T Consensus 274 ALDA~TGk~~W~--fg-~~G~vdl~~~~g~~~~g~~~~ts~P~V~~g~VIvG~~v~d~~~~~~~~G~I~A~Da~TGkl~W 350 (764)
T TIGR03074 274 ALDADTGKLCED--FG-NNGTVDLTAGMGTTPPGYYYPTSPPLVAGTTVVIGGRVADNYSTDEPSGVIRAFDVNTGALVW 350 (764)
T ss_pred EEECCCCCEEEE--ec-CCCceeeecccCcCCCcccccccCCEEECCEEEEEecccccccccCCCcEEEEEECCCCcEee
Confidence 999999998732 21 111110 111111 1335555532 4 79999999999998
Q ss_pred EEEecccCC---------CC-CceeE-EEEEEccCC-EEEEE------------------cCCCcEEEEeCCCCeeEEEe
Q psy12614 191 KMSLDKSSK---------FS-KNTAV-WCVAFCADF-TIITG------------------DSGGFVRFWDGKTGVQWSDV 240 (708)
Q Consensus 191 ~~~~~~~~~---------~~-~~~~v-~~~~~~~~~-~l~~~------------------~~dg~i~~wd~~~~~~~~~~ 240 (708)
.+....... +. ....+ ..+++.++. .+..+ ...+.|.-.|.++|+..-.+
T Consensus 351 ~~~~g~p~~~~~~~~g~~~~~gg~n~W~~~s~D~~~glvy~ptGn~~pd~~g~~r~~~~n~y~~slvALD~~TGk~~W~~ 430 (764)
T TIGR03074 351 AWDPGNPDPTAPPAPGETYTRNTPNSWSVASYDEKLGLVYLPMGNQTPDQWGGDRTPADEKYSSSLVALDATTGKERWVF 430 (764)
T ss_pred EEecCCCCcccCCCCCCEeccCCCCccCceEEcCCCCeEEEeCCCccccccCCccccCcccccceEEEEeCCCCceEEEe
Confidence 886532100 00 00111 123344432 22211 12356777888888887666
Q ss_pred eccccCe---------EEEEEeC-CCC---EEEEEecCCeEEEEEccC
Q psy12614 241 KTHKKDI---------LALTVSE-DEN---YLYCAGVDPTVVCFQRTR 275 (708)
Q Consensus 241 ~~~~~~i---------~~~~~s~-~~~---~l~~~~~dg~i~iw~~~~ 275 (708)
+.....+ .-+.+.. +|+ .++.++.+|.++++|.++
T Consensus 431 Q~~~hD~WD~D~~~~p~L~d~~~~~G~~~~~v~~~~K~G~~~vlDr~t 478 (764)
T TIGR03074 431 QTVHHDLWDMDVPAQPSLVDLPDADGTTVPALVAPTKQGQIYVLDRRT 478 (764)
T ss_pred cccCCccccccccCCceEEeeecCCCcEeeEEEEECCCCEEEEEECCC
Confidence 5422111 1122322 553 788999999999999999
|
This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases. |
| >KOG1898|consensus | Back alignment and domain information |
|---|
Probab=95.30 E-value=5.9 Score=43.68 Aligned_cols=112 Identities=13% Similarity=0.134 Sum_probs=67.0
Q ss_pred CCceEEEEcCCcEEEEEcCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEec-CCCceEEEEeCCCCcEEEEE
Q psy12614 343 QSTPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAV-NNATIRCSVVSNDGKYVAYS 421 (708)
Q Consensus 343 ~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~s~~g~~l~~~ 421 (708)
.....++.|-..+++++....+++|++...+ .+.+.... ....|+.+.+ .+..+++|
T Consensus 935 ~~~v~Ai~~f~~~~LagvG~~l~~YdlG~K~--------------------lLRk~e~k~~p~~Is~iqt--~~~RI~Vg 992 (1205)
T KOG1898|consen 935 PGPVGAICPFQGRVLAGVGRFLRLYDLGKKK--------------------LLRKCELKFIPNRISSIQT--YGARIVVG 992 (1205)
T ss_pred CccceEEeccCCEEEEecccEEEEeeCChHH--------------------HHhhhhhccCceEEEEEee--cceEEEEe
Confidence 4466888898889999999999999998755 11111111 2345555554 56788888
Q ss_pred c-CCceEEEEEEecCCcceeEEeecCCcccccceeEEEEEecCCCeEEEEecCCcEEEecCC
Q psy12614 422 T-ESCVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVLISADSTLLLAVSLNGPLYIIDLS 482 (708)
Q Consensus 422 ~-d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~~~~~dg~i~~~~~~ 482 (708)
+ ...+.++.....+.. +.. +....-...++++.+- |...+|.+..-|.+|-+...
T Consensus 993 D~qeSV~~~~y~~~~n~--l~~---fadD~~pR~Vt~~~~l-D~~tvagaDrfGNi~~vR~P 1048 (1205)
T KOG1898|consen 993 DIQESVHFVRYRREDNQ--LIV---FADDPVPRHVTALELL-DYDTVAGADRFGNIAVVRIP 1048 (1205)
T ss_pred eccceEEEEEEecCCCe--EEE---EeCCCccceeeEEEEe-cCCceeeccccCcEEEEECC
Confidence 7 555666666553333 222 2222213344444443 45567667777777776543
|
|
| >PLN00033 photosystem II stability/assembly factor; Provisional | Back alignment and domain information |
|---|
Probab=95.26 E-value=3.8 Score=41.29 Aligned_cols=147 Identities=15% Similarity=0.182 Sum_probs=88.4
Q ss_pred cEEEEEECCCCCEEEEecCC-eEEEEEcCCCceE-EEEEecccCCCCCceeEEEEEEccCCEEEEEcCCCcEEEEeCCCC
Q psy12614 157 RILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAI-HKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTG 234 (708)
Q Consensus 157 ~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~wd~~~~ 234 (708)
....+..++|+.+++.+... .++-|| .|... ...... ....+..+.+.+++.++..+..|.+..- ...+
T Consensus 240 sf~~v~~~~dG~~~~vg~~G~~~~s~d--~G~~~W~~~~~~------~~~~l~~v~~~~dg~l~l~g~~G~l~~S-~d~G 310 (398)
T PLN00033 240 TFSTVNRSPDGDYVAVSSRGNFYLTWE--PGQPYWQPHNRA------SARRIQNMGWRADGGLWLLTRGGGLYVS-KGTG 310 (398)
T ss_pred ceeeEEEcCCCCEEEEECCccEEEecC--CCCcceEEecCC------CccceeeeeEcCCCCEEEEeCCceEEEe-cCCC
Confidence 34556778899888888877 555565 34332 333332 2566899999999987777777776543 3344
Q ss_pred e-----eEEEeec--cccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEE
Q psy12614 235 V-----QWSDVKT--HKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKS 307 (708)
Q Consensus 235 ~-----~~~~~~~--~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~ 307 (708)
+ ....... ....+..+.|.+++..++ ++..|.+....- . |+ .|........-......
T Consensus 311 ~~~~~~~f~~~~~~~~~~~l~~v~~~~d~~~~a-~G~~G~v~~s~D-~--------G~-----tW~~~~~~~~~~~~ly~ 375 (398)
T PLN00033 311 LTEEDFDFEEADIKSRGFGILDVGYRSKKEAWA-AGGSGILLRSTD-G--------GK-----SWKRDKGADNIAANLYS 375 (398)
T ss_pred CcccccceeecccCCCCcceEEEEEcCCCcEEE-EECCCcEEEeCC-C--------Cc-----ceeEccccCCCCcceeE
Confidence 3 2222221 223588899998876554 556676665543 3 32 34333222223456778
Q ss_pred EEEe-CCEEEEEcCCCeEEEE
Q psy12614 308 LALH-GNRLYSGGLDSYLSLS 327 (708)
Q Consensus 308 l~~~-~~~l~s~~~d~~i~iw 327 (708)
+.|. .+.....+.+|.|..|
T Consensus 376 v~f~~~~~g~~~G~~G~il~~ 396 (398)
T PLN00033 376 VKFFDDKKGFVLGNDGVLLRY 396 (398)
T ss_pred EEEcCCCceEEEeCCcEEEEe
Confidence 8876 5666777777876544
|
|
| >PHA02790 Kelch-like protein; Provisional | Back alignment and domain information |
|---|
Probab=95.24 E-value=1.1 Score=46.95 Aligned_cols=183 Identities=8% Similarity=0.034 Sum_probs=90.5
Q ss_pred CCCEEEEEeCC-----CcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC---eEEEEEcCCCceEEEEE
Q psy12614 122 KKRLLAAGTEQ-----GHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA---AVRVWDIHKGHAIHKMS 193 (708)
Q Consensus 122 ~~~~la~~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d---~i~iwd~~~~~~~~~~~ 193 (708)
++..+++|+.+ ..+..||..++.......+....... +++ .-++...+.|+.+ .+..||..+++-...-.
T Consensus 271 ~~~lyviGG~~~~~~~~~v~~Ydp~~~~W~~~~~m~~~r~~~-~~v-~~~~~iYviGG~~~~~sve~ydp~~n~W~~~~~ 348 (480)
T PHA02790 271 GEVVYLIGGWMNNEIHNNAIAVNYISNNWIPIPPMNSPRLYA-SGV-PANNKLYVVGGLPNPTSVERWFHGDAAWVNMPS 348 (480)
T ss_pred CCEEEEEcCCCCCCcCCeEEEEECCCCEEEECCCCCchhhcc-eEE-EECCEEEEECCcCCCCceEEEECCCCeEEECCC
Confidence 34555666653 34778888887765323332211111 222 2356666777753 68888876654322111
Q ss_pred ecccCCCCCceeEEEEEEccCCE-EEEEcCCC---cEEEEeCCCCeeEEE--eeccccCeEEEEEeCCCCEEEEEecCCe
Q psy12614 194 LDKSSKFSKNTAVWCVAFCADFT-IITGDSGG---FVRFWDGKTGVQWSD--VKTHKKDILALTVSEDENYLYCAGVDPT 267 (708)
Q Consensus 194 ~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg---~i~~wd~~~~~~~~~--~~~~~~~i~~~~~s~~~~~l~~~~~dg~ 267 (708)
... ...-.+++ .-+|+ ++.|+.++ .+..||..+++-... +....... ++ ..-+++..+.| |.
T Consensus 349 l~~------~r~~~~~~-~~~g~IYviGG~~~~~~~ve~ydp~~~~W~~~~~m~~~r~~~-~~-~~~~~~IYv~G---G~ 416 (480)
T PHA02790 349 LLK------PRCNPAVA-SINNVIYVIGGHSETDTTTEYLLPNHDQWQFGPSTYYPHYKS-CA-LVFGRRLFLVG---RN 416 (480)
T ss_pred CCC------CCcccEEE-EECCEEEEecCcCCCCccEEEEeCCCCEEEeCCCCCCccccc-eE-EEECCEEEEEC---Cc
Confidence 110 11111222 23566 56666543 467888876543221 11111111 22 22345444444 45
Q ss_pred EEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEeCCEEEEEcCC-----CeEEEEeCCCC
Q psy12614 268 VVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALHGNRLYSGGLD-----SYLSLSYYPPK 332 (708)
Q Consensus 268 i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~s~~~d-----~~i~iw~~~~~ 332 (708)
..+||..+ ..|.....+.............+...+.||.+ ..+..||..+.
T Consensus 417 ~e~ydp~~--------------~~W~~~~~m~~~r~~~~~~v~~~~IYviGG~~~~~~~~~ve~Yd~~~~ 472 (480)
T PHA02790 417 AEFYCESS--------------NTWTLIDDPIYPRDNPELIIVDNKLLLIGGFYRGSYIDTIEVYNNRTY 472 (480)
T ss_pred eEEecCCC--------------CcEeEcCCCCCCccccEEEEECCEEEEECCcCCCcccceEEEEECCCC
Confidence 77888876 35766555443333333334447777777754 24555665544
|
|
| >PF13449 Phytase-like: Esterase-like activity of phytase | Back alignment and domain information |
|---|
Probab=95.22 E-value=3.5 Score=40.63 Aligned_cols=165 Identities=13% Similarity=0.066 Sum_probs=92.7
Q ss_pred CCceEEEEeC-CCCcEEEEEcCCc------eEEEEEEecC---CcceeEEeecCCcccc-c-----ceeEEEEEecCCCe
Q psy12614 403 NATIRCSVVS-NDGKYVAYSTESC------VRLHSLDLDG---DKPQISRIKNLPAPLF-K-----SIFTHVLISADSTL 466 (708)
Q Consensus 403 ~~~i~~~~~s-~~g~~l~~~~d~~------i~i~~~~~~~---~~~~~~~~~~~~~~~~-~-----~~i~~~~~s~d~~~ 466 (708)
-+.+..+.+. .++.++++++++. +..+++.... ..+.+.....+....+ . ....+|++.++|.+
T Consensus 19 ~GGlSgl~~~~~~~~~~avSD~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~G~~~~~~~~D~Egi~~~~~g~~ 98 (326)
T PF13449_consen 19 FGGLSGLDYDPDDGRFYAVSDRGPNKGPPRFYTFRIDYDQGGIGGVTILDMIPLRDPDGQPFPKNGLDPEGIAVPPDGSF 98 (326)
T ss_pred cCcEeeEEEeCCCCEEEEEECCCCCCCCCcEEEEEeeccCCCccceEeccceeccCCCCCcCCcCCCChhHeEEecCCCE
Confidence 3567888898 5777778888777 6666655411 1112211111222111 1 12334888777777
Q ss_pred EEEEecCC------c-EEEecCCCeEEEEEecCC----------CCCccCcceEEEEECCCCcEEEEEecC-----C---
Q psy12614 467 LLAVSLNG------P-LYIIDLSSLEIKYCVDPY----------KSNLMSDVISLVQMSECKQYIVCADRK-----S--- 521 (708)
Q Consensus 467 l~~~~~dg------~-i~~~~~~~~~~~~~~~~~----------~~~~~~~~i~~~~~s~~~~~l~~~~~d-----~--- 521 (708)
+++. +.+ . |+.++.. ++.+..+..+ .+...+.....++++|||+.|+++.+. +
T Consensus 99 ~is~-E~~~~~~~~p~I~~~~~~-G~~~~~~~vP~~~~~~~~~~~~~~~N~G~E~la~~~dG~~l~~~~E~~l~~d~~~~ 176 (326)
T PF13449_consen 99 WISS-EGGRTGGIPPRIRRFDLD-GRVIRRFPVPAAFLPDANGTSGRRNNRGFEGLAVSPDGRTLFAAMESPLKQDGPRA 176 (326)
T ss_pred EEEe-CCccCCCCCCEEEEECCC-CcccceEccccccccccCccccccCCCCeEEEEECCCCCEEEEEECccccCCCccc
Confidence 7644 444 3 8888754 3444433211 111226788999999999977665422 2
Q ss_pred ------eEEEEECC--c-e------eeecCC-----CCCCceEEEEcCCCCEEEEEec-----CCcEEEEEcC
Q psy12614 522 ------HVVIWKNG--Q-H------HASLPR-----YRKPSTAMAIHPTLSTLVTVYS-----DHRIVEFDLN 569 (708)
Q Consensus 522 ------~i~iw~~~--~-~------~~~~~~-----~~~~v~~l~~s~d~~~l~~~~~-----dg~i~vwd~~ 569 (708)
.++++.+. + . ...+.. ....|+.+.+-+++++|+.--. ...++|+.+.
T Consensus 177 ~~~~~~~~ri~~~d~~~~~~~~~~~~y~ld~~~~~~~~~~isd~~al~d~~lLvLER~~~~~~~~~~ri~~v~ 249 (326)
T PF13449_consen 177 NPDNGSPLRILRYDPKTPGEPVAEYAYPLDPPPTAPGDNGISDIAALPDGRLLVLERDFSPGTGNYKRIYRVD 249 (326)
T ss_pred ccccCceEEEEEecCCCCCccceEEEEeCCccccccCCCCceeEEEECCCcEEEEEccCCCCccceEEEEEEE
Confidence 15555555 2 1 113332 4578899999999997764422 3445666554
|
|
| >COG4590 ABC-type uncharacterized transport system, permease component [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.13 E-value=0.27 Score=47.94 Aligned_cols=168 Identities=14% Similarity=0.150 Sum_probs=95.8
Q ss_pred cCCCceEEEEeCCCCcEEEEEcCCceEEEEEEecCCcceeEEeecC-CcccccceeE-EEEEecCCCeEEEEecCCc---
Q psy12614 401 VNNATIRCSVVSNDGKYVAYSTESCVRLHSLDLDGDKPQISRIKNL-PAPLFKSIFT-HVLISADSTLLLAVSLNGP--- 475 (708)
Q Consensus 401 ~~~~~i~~~~~s~~g~~l~~~~d~~i~i~~~~~~~~~~~~~~~~~~-~~~~~~~~i~-~~~~s~d~~~l~~~~~dg~--- 475 (708)
.....+..+-..|||+++.+-+..++.++++.. ..+..+++-.. ++.. ...|+ ++..-..|..|.+++.||.
T Consensus 218 ~~~~~v~qllL~Pdg~~LYv~~g~~~~v~~L~~--r~l~~rkl~~dspg~~-~~~Vte~l~lL~Gg~SLLv~~~dG~vsQ 294 (733)
T COG4590 218 VPFSDVSQLLLTPDGKTLYVRTGSELVVALLDK--RSLQIRKLVDDSPGDS-RHQVTEQLYLLSGGFSLLVVHEDGLVSQ 294 (733)
T ss_pred CCccchHhhEECCCCCEEEEecCCeEEEEeecc--cccchhhhhhcCCCch-HHHHHHHHHHHhCceeEEEEcCCCceee
Confidence 445667778899999999997778999999986 33334332211 2211 11121 1223345667778888887
Q ss_pred EEEecCCCeEEEEEecCCCCCccCcceEEEEECCCCcEEEEEecCCeEEEEECC-ceeeecCCCCCCceEEEEcCCCCEE
Q psy12614 476 LYIIDLSSLEIKYCVDPYKSNLMSDVISLVQMSECKQYIVCADRKSHVVIWKNG-QHHASLPRYRKPSTAMAIHPTLSTL 554 (708)
Q Consensus 476 i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~-~~~~~~~~~~~~v~~l~~s~d~~~l 554 (708)
-+++..+....+......+-. ..++..+.-..+.+-+++-+..|++.++... ....-+..--..+..+++||.+.+|
T Consensus 295 WFdvr~~~~p~l~h~R~f~l~--pa~~~~l~pe~~rkgF~~l~~~G~L~~f~st~~~~lL~~~~~~~~~~~~~Sp~~~~L 372 (733)
T COG4590 295 WFDVRRDGQPHLNHIRNFKLA--PAEVQFLLPETNRKGFYSLYRNGTLQSFYSTSEKLLLFERAYQAPQLVAMSPNQAYL 372 (733)
T ss_pred eeeeecCCCCcceeeeccccC--cccceeeccccccceEEEEcCCCceeeeecccCcceehhhhhcCcceeeeCcccchh
Confidence 334432221122111111111 2233333333344556666777888776655 2222222233477889999999998
Q ss_pred EEEecCCcEEEEEcCCCCCC
Q psy12614 555 VTVYSDHRIVEFDLNRKAFT 574 (708)
Q Consensus 555 ~~~~~dg~i~vwd~~~~~~~ 574 (708)
++- +.|.++++.+++....
T Consensus 373 l~e-~~gki~~~~l~Nr~Pe 391 (733)
T COG4590 373 LSE-DQGKIRLAQLENRNPE 391 (733)
T ss_pred eee-cCCceEEEEecCCCCC
Confidence 854 4577999999886543
|
|
| >KOG2377|consensus | Back alignment and domain information |
|---|
Probab=95.02 E-value=0.54 Score=46.00 Aligned_cols=149 Identities=11% Similarity=0.057 Sum_probs=92.3
Q ss_pred cCCCCceEEEEcCCcEEEEEcCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEE
Q psy12614 340 TLAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVA 419 (708)
Q Consensus 340 ~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~ 419 (708)
..++...+-|...++.+.+...+.+.-|...... +.....+.....++|.++.||+|.+.+|
T Consensus 21 nipesngvFfDDaNkqlfavrSggatgvvvkgpn------------------dDVpiSfdm~d~G~I~SIkFSlDnkilA 82 (657)
T KOG2377|consen 21 NIPESNGVFFDDANKQLFAVRSGGATGVVVKGPN------------------DDVPISFDMDDKGEIKSIKFSLDNKILA 82 (657)
T ss_pred cCCcccceeeccCcceEEEEecCCeeEEEEeCCC------------------CCCCceeeecCCCceeEEEeccCcceEE
Confidence 3445556667666777776666666666655422 1122233334567999999999999999
Q ss_pred EE-cCCceEEEEEEecCCcceeEEeecCCcccc-cceeEEEEEecCCCeEEEEecCCc-EEEecCCCeEEEEEecCCCCC
Q psy12614 420 YS-TESCVRLHSLDLDGDKPQISRIKNLPAPLF-KSIFTHVLISADSTLLLAVSLNGP-LYIIDLSSLEIKYCVDPYKSN 496 (708)
Q Consensus 420 ~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~s~d~~~l~~~~~dg~-i~~~~~~~~~~~~~~~~~~~~ 496 (708)
+- .+.+|.+++...++..+... ..+.. ...|....|+.+ .-+|..+..|. +|.+.... ..++..+ .+
T Consensus 83 VQR~~~~v~f~nf~~d~~~l~~~-----~~ck~k~~~IlGF~W~~s-~e~A~i~~~G~e~y~v~pek-rslRlVk---s~ 152 (657)
T KOG2377|consen 83 VQRTSKTVDFCNFIPDNSQLEYT-----QECKTKNANILGFCWTSS-TEIAFITDQGIEFYQVLPEK-RSLRLVK---SH 152 (657)
T ss_pred EEecCceEEEEecCCCchhhHHH-----HHhccCcceeEEEEEecC-eeEEEEecCCeEEEEEchhh-hhhhhhh---hc
Confidence 94 59999999986533332221 11111 334666788766 77888888888 88776431 1222222 33
Q ss_pred ccCcceEEEEECCCCcEEEEEe
Q psy12614 497 LMSDVISLVQMSECKQYIVCAD 518 (708)
Q Consensus 497 ~~~~~i~~~~~s~~~~~l~~~~ 518 (708)
...|+-..|.++.+.+..++
T Consensus 153 --~~nvnWy~yc~et~v~LL~t 172 (657)
T KOG2377|consen 153 --NLNVNWYMYCPETAVILLST 172 (657)
T ss_pred --ccCccEEEEccccceEeeec
Confidence 56788889999877654443
|
|
| >PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins | Back alignment and domain information |
|---|
Probab=94.96 E-value=0.14 Score=31.70 Aligned_cols=32 Identities=19% Similarity=0.345 Sum_probs=27.0
Q ss_pred CcEEEEEEcCCC---CEEEEEeCCCcEEEEeCCCC
Q psy12614 27 KVINCIACEPKS---SRLAVSRADQSIEIWDISET 58 (708)
Q Consensus 27 ~~v~~~~~s~~~---~~la~~~~dg~v~iwd~~~~ 58 (708)
++|.++.|||+. .+||.+-..|.|.|+|+.++
T Consensus 1 GAvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~~ 35 (43)
T PF10313_consen 1 GAVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRSN 35 (43)
T ss_pred CCeEEEEeCCCCCcccEEEEEccCCeEEEEEcccC
Confidence 478999999854 58999888899999999863
|
It contains a characteristic DLL sequence motif. |
| >TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain | Back alignment and domain information |
|---|
Probab=94.93 E-value=1.5 Score=44.21 Aligned_cols=142 Identities=10% Similarity=-0.013 Sum_probs=78.7
Q ss_pred CcEEEEEEcCCCCEEEEEe-----------CCC-cEEEEeCCC--CCeEE-EEEecCCCCCcEEEEEEe-CCEEEEEcCC
Q psy12614 27 KVINCIACEPKSSRLAVSR-----------ADQ-SIEIWDISE--TPHVD-RVFIGDPLSNSIECLTWF-NDRLFSGGLQ 90 (708)
Q Consensus 27 ~~v~~~~~s~~~~~la~~~-----------~dg-~v~iwd~~~--~~~~~-~~~~~h~~~~~v~~l~~~-~~~l~s~~~d 90 (708)
.....|+|.++|+++++-. ..+ .|.+++-.+ |+... ..+.... .....|++. +. |+++...
T Consensus 14 ~~P~~ia~d~~G~l~V~e~~~y~~~~~~~~~~~~rI~~l~d~dgdG~~d~~~vfa~~l--~~p~Gi~~~~~G-lyV~~~~ 90 (367)
T TIGR02604 14 RNPIAVCFDERGRLWVAEGITYSRPAGRQGPLGDRILILEDADGDGKYDKSNVFAEEL--SMVTGLAVAVGG-VYVATPP 90 (367)
T ss_pred CCCceeeECCCCCEEEEeCCcCCCCCCCCCCCCCEEEEEEcCCCCCCcceeEEeecCC--CCccceeEecCC-EEEeCCC
Confidence 4567899999999777642 223 787776543 33221 2333333 456889988 55 5555555
Q ss_pred CcEEEEECCCC-----eE--e-EEEee----cCCceEEEEEecCCCEEEEEeCC-------------------CcEEEEE
Q psy12614 91 GFVNEYDMRRL-----NI--K-SSTAV----TSGTCWCLSVHKKKRLLAAGTEQ-------------------GHINLFQ 139 (708)
Q Consensus 91 ~~i~vwd~~~~-----~~--~-~~~~~----~~~~v~~~~~s~~~~~la~~~~d-------------------~~i~iwd 139 (708)
...++.|.... +. + ..+.. +......++|.|||.+.++-+.. |.|.-++
T Consensus 91 ~i~~~~d~~gdg~ad~~~~~l~~~~~~~~~~~~~~~~~l~~gpDG~LYv~~G~~~~~~~~~~~~~~~~~~~~~g~i~r~~ 170 (367)
T TIGR02604 91 DILFLRDKDGDDKADGEREVLLSGFGGQINNHHHSLNSLAWGPDGWLYFNHGNTLASKVTRPGTSDESRQGLGGGLFRYN 170 (367)
T ss_pred eEEEEeCCCCCCCCCCccEEEEEccCCCCCcccccccCceECCCCCEEEecccCCCceeccCCCccCcccccCceEEEEe
Confidence 43344454321 21 1 11222 13447789999999876654421 3355555
Q ss_pred ccCCcEEEEEecccccccEEEEEECCCCCEEEEec
Q psy12614 140 ISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGC 174 (708)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~ 174 (708)
..+++.. ....++ .....++|+|+|+++++-.
T Consensus 171 pdg~~~e--~~a~G~-rnp~Gl~~d~~G~l~~tdn 202 (367)
T TIGR02604 171 PDGGKLR--VVAHGF-QNPYGHSVDSWGDVFFCDN 202 (367)
T ss_pred cCCCeEE--EEecCc-CCCccceECCCCCEEEEcc
Confidence 5554442 222222 2345778888887766543
|
All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs. |
| >KOG2377|consensus | Back alignment and domain information |
|---|
Probab=94.84 E-value=4.5 Score=39.97 Aligned_cols=138 Identities=10% Similarity=0.061 Sum_probs=91.4
Q ss_pred EEEecCCCeEEEEecCCc-EEEecCCCeEEEEEecCCCCCccCcceEEEEECCCCcEEEEEecCCeEEEEECC---cee-
Q psy12614 458 VLISADSTLLLAVSLNGP-LYIIDLSSLEIKYCVDPYKSNLMSDVISLVQMSECKQYIVCADRKSHVVIWKNG---QHH- 532 (708)
Q Consensus 458 ~~~s~d~~~l~~~~~dg~-i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~---~~~- 532 (708)
+-|...++.|++..+.|. =|..........-.+.... .++|.++.||+|.+.||+--.++.|.+++.. ...
T Consensus 28 vFfDDaNkqlfavrSggatgvvvkgpndDVpiSfdm~d----~G~I~SIkFSlDnkilAVQR~~~~v~f~nf~~d~~~l~ 103 (657)
T KOG2377|consen 28 VFFDDANKQLFAVRSGGATGVVVKGPNDDVPISFDMDD----KGEIKSIKFSLDNKILAVQRTSKTVDFCNFIPDNSQLE 103 (657)
T ss_pred eeeccCcceEEEEecCCeeEEEEeCCCCCCCceeeecC----CCceeEEEeccCcceEEEEecCceEEEEecCCCchhhH
Confidence 667666666666655555 5555544333444444322 6699999999999999999999999999985 111
Q ss_pred --eecCCCCCCceEEEEcCCCCEEEEEecCCcEEEEEcCCCCCCchhhhhhccCchhhhcCCCCeeEEEeCCCCCceEEE
Q psy12614 533 --ASLPRYRKPSTAMAIHPTLSTLVTVYSDHRIVEFDLNRKAFTTFSRKLETNHPNEWLSRQLPVLGIEFDPQDSSLIYL 610 (708)
Q Consensus 533 --~~~~~~~~~v~~l~~s~d~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~~~~l~~~ 610 (708)
.+....+..|....|+.. .-+|..+..| +-+|.+...+.. .+....|.-.|.--.|.++-+.++.+
T Consensus 104 ~~~~ck~k~~~IlGF~W~~s-~e~A~i~~~G-~e~y~v~pekrs----------lRlVks~~~nvnWy~yc~et~v~LL~ 171 (657)
T KOG2377|consen 104 YTQECKTKNANILGFCWTSS-TEIAFITDQG-IEFYQVLPEKRS----------LRLVKSHNLNVNWYMYCPETAVILLS 171 (657)
T ss_pred HHHHhccCcceeEEEEEecC-eeEEEEecCC-eEEEEEchhhhh----------hhhhhhcccCccEEEEccccceEeee
Confidence 133444566889999954 6677777666 777776543321 12344577778888888887764443
Q ss_pred E
Q psy12614 611 M 611 (708)
Q Consensus 611 ~ 611 (708)
+
T Consensus 172 t 172 (657)
T KOG2377|consen 172 T 172 (657)
T ss_pred c
Confidence 3
|
|
| >PF14761 HPS3_N: Hermansky-Pudlak syndrome 3 | Back alignment and domain information |
|---|
Probab=94.81 E-value=1.4 Score=39.03 Aligned_cols=139 Identities=17% Similarity=0.159 Sum_probs=77.8
Q ss_pred CEEEEEeCCCcEEEEeCCCCC-eEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCC------cEEEE-ECCCC----eEe
Q psy12614 39 SRLAVSRADQSIEIWDISETP-HVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQG------FVNEY-DMRRL----NIK 104 (708)
Q Consensus 39 ~~la~~~~dg~v~iwd~~~~~-~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~------~i~vw-d~~~~----~~~ 104 (708)
+.|..+.....|.+|++.+.. .+...|.- - +.|..++++ |++|++--.+. .+++| |+... .++
T Consensus 29 d~Lfva~~g~~Vev~~l~~~~~~~~~~F~T-v--~~V~~l~y~~~GDYlvTlE~k~~~~~~~fvR~Y~NWr~~~~~~~~v 105 (215)
T PF14761_consen 29 DALFVAASGCKVEVYDLEQEECPLLCTFST-V--GRVLQLVYSEAGDYLVTLEEKNKRSPVDFVRAYFNWRSQKEENSPV 105 (215)
T ss_pred ceEEEEcCCCEEEEEEcccCCCceeEEEcc-h--hheeEEEeccccceEEEEEeecCCccceEEEEEEEhhhhcccCCcE
Confidence 344444556789999998433 22224442 2 789999999 99999885432 45664 22221 122
Q ss_pred E-EEeec---------------------CCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEE-E---EEec----ccc
Q psy12614 105 S-STAVT---------------------SGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLL-Y---EKLL----DRQ 154 (708)
Q Consensus 105 ~-~~~~~---------------------~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~-~---~~~~----~~~ 154 (708)
. .+-+| ...+.+++..|-..-|++|+. +.+.+|.+...... . ...+ -.|
T Consensus 106 ~vRiaG~~v~~~~~~~~~~qleiiElPl~~~p~ciaCC~~tG~LlVg~~-~~l~lf~l~~~~~~~~~~~~lDFe~~l~~~ 184 (215)
T PF14761_consen 106 RVRIAGHRVTPSFNESSKDQLEIIELPLSEPPLCIACCPVTGNLLVGCG-NKLVLFTLKYQTIQSEKFSFLDFERSLIDH 184 (215)
T ss_pred EEEEcccccccCCCCccccceEEEEecCCCCCCEEEecCCCCCEEEEcC-CEEEEEEEEEEEEecccccEEechhhhhhe
Confidence 1 12222 346678888885555666554 57889987644331 0 0011 111
Q ss_pred -c-ccEEEEEECCCCCEEEEecCCeEEEEEc
Q psy12614 155 -Q-GRILCTAWHSSGDYLVTGCAAAVRVWDI 183 (708)
Q Consensus 155 -~-~~v~~~~~s~d~~~l~~~~~d~i~iwd~ 183 (708)
. -....+++. +.|+|..+...+++..+
T Consensus 185 ~~~~~p~~v~ic--~~yiA~~s~~ev~Vlkl 213 (215)
T PF14761_consen 185 IDNFKPTQVAIC--EGYIAVMSDLEVLVLKL 213 (215)
T ss_pred ecCceEEEEEEE--eeEEEEecCCEEEEEEE
Confidence 1 223445554 56788777767776654
|
|
| >PLN00033 photosystem II stability/assembly factor; Provisional | Back alignment and domain information |
|---|
Probab=94.72 E-value=5.4 Score=40.24 Aligned_cols=148 Identities=11% Similarity=-0.018 Sum_probs=84.1
Q ss_pred EEEEcCCcEEEEEcCCeEEE-EEecCCCCCCCCCCCCCCcccCCCCceEE-EEEEecCCCceEEEEeCCCCcEEEEEcCC
Q psy12614 347 VSLAKDIQHVLLQYTSHLEL-WSLGSAQSTDLSSHSNTTGVPLLSFPRLI-VKMSAVNNATIRCSVVSNDGKYVAYSTES 424 (708)
Q Consensus 347 ~~~s~~~~~l~~~~~~~i~i-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~~~s~~g~~l~~~~d~ 424 (708)
+..++++.+++++..+.+.. |+-.. .. ..........+.++.+.++|.+++++..|
T Consensus 244 v~~~~dG~~~~vg~~G~~~~s~d~G~----------------------~~W~~~~~~~~~~l~~v~~~~dg~l~l~g~~G 301 (398)
T PLN00033 244 VNRSPDGDYVAVSSRGNFYLTWEPGQ----------------------PYWQPHNRASARRIQNMGWRADGGLWLLTRGG 301 (398)
T ss_pred EEEcCCCCEEEEECCccEEEecCCCC----------------------cceEEecCCCccceeeeeEcCCCCEEEEeCCc
Confidence 45678888888887775433 33221 11 12223445678899999999999988887
Q ss_pred ceEEEEEEecCCc--ceeEEeecCCcccccceeEEEEEecCCCeEEEEecCCcEEEe-cCCCeEEEEEecCCCCCccCcc
Q psy12614 425 CVRLHSLDLDGDK--PQISRIKNLPAPLFKSIFTHVLISADSTLLLAVSLNGPLYII-DLSSLEIKYCVDPYKSNLMSDV 501 (708)
Q Consensus 425 ~i~i~~~~~~~~~--~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~~~~~dg~i~~~-~~~~~~~~~~~~~~~~~~~~~~ 501 (708)
.+..- ...+... ..+.. ++.......+..+.|.+++..++ ++..|.++.. +.+ +.-......... ...
T Consensus 302 ~l~~S-~d~G~~~~~~~f~~---~~~~~~~~~l~~v~~~~d~~~~a-~G~~G~v~~s~D~G--~tW~~~~~~~~~--~~~ 372 (398)
T PLN00033 302 GLYVS-KGTGLTEEDFDFEE---ADIKSRGFGILDVGYRSKKEAWA-AGGSGILLRSTDGG--KSWKRDKGADNI--AAN 372 (398)
T ss_pred eEEEe-cCCCCcccccceee---cccCCCCcceEEEEEcCCCcEEE-EECCCcEEEeCCCC--cceeEccccCCC--Ccc
Confidence 75442 2221100 02222 22111123577789998887766 4566664444 333 222222211122 446
Q ss_pred eEEEEECCCCcEEEEEecCCeEEEE
Q psy12614 502 ISLVQMSECKQYIVCADRKSHVVIW 526 (708)
Q Consensus 502 i~~~~~s~~~~~l~~~~~d~~i~iw 526 (708)
...+.|.++++.+++| .+|.|.-|
T Consensus 373 ly~v~f~~~~~g~~~G-~~G~il~~ 396 (398)
T PLN00033 373 LYSVKFFDDKKGFVLG-NDGVLLRY 396 (398)
T ss_pred eeEEEEcCCCceEEEe-CCcEEEEe
Confidence 7799998888888877 57776654
|
|
| >KOG1983|consensus | Back alignment and domain information |
|---|
Probab=94.67 E-value=2.5 Score=48.22 Aligned_cols=226 Identities=12% Similarity=0.037 Sum_probs=112.0
Q ss_pred CCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCC--cEEEEEEe--CCEEEEEcCCCcEEEEECC
Q psy12614 24 PEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSN--SIECLTWF--NDRLFSGGLQGFVNEYDMR 99 (708)
Q Consensus 24 ~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~--~v~~l~~~--~~~l~s~~~d~~i~vwd~~ 99 (708)
|-+.....++|+|...++|.|..+|.|++|-...-+.. ..|.... .+..+.+. .........+..+.+|...
T Consensus 33 G~~~~~~~~afD~~q~llai~t~tg~i~~yg~~~ve~~----~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~ 108 (993)
T KOG1983|consen 33 GFPSTPSALAFDPTQGLLAIGTRTGAIKIYGQPGVEFV----GLHPKQNQINVTRIELLVGISRNLVLSDDDSLHLWSIK 108 (993)
T ss_pred CCCCCCcceeeccccceEEEEEecccEEEecccceEEE----eccccccchhhhheeeeecccccceeecccceeeeccc
Confidence 44567788999999999999999999999987653322 2222011 12222222 3334444555666666654
Q ss_pred CCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEE--EecccccccEEEEEECCCCCEEEEecCC-
Q psy12614 100 RLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYE--KLLDRQQGRILCTAWHSSGDYLVTGCAA- 176 (708)
Q Consensus 100 ~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~--~~~~~~~~~v~~~~~s~d~~~l~~~~~d- 176 (708)
...... +.+.+++..-.+--.+ +.+ ..+.+++||..-...... ..+..+...+ . ...+-.-.+.---.+
T Consensus 109 ~~~~~~----~~~~~~~~~~~~~~~~-~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~s~~~~~~~~~~~~ 180 (993)
T KOG1983|consen 109 IKTGVF----LKQEITSFVTDPPPDW-LIG-ENGLVKVSDVLRHQLSDLKYAGTESSNFVP-Y-ESLSPTLSIEGLVIDL 180 (993)
T ss_pred ccceee----cCCcceeccCCCCcch-hcc-cCceeeEeeechhhhccceeccccccccce-e-eeeccceeeecccccc
Confidence 432221 2233333332222223 344 778888888764332100 1111111000 0 000000000000011
Q ss_pred eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCC
Q psy12614 177 AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDE 256 (708)
Q Consensus 177 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~ 256 (708)
.-.+|.+..-. ..+. -+...+.+..+......+.+...+.+-+|+.........+...... .++++
T Consensus 181 ~~~~~~~~~~~--~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~ 246 (993)
T KOG1983|consen 181 DTVLISLPDAY--LGLS-------LIEYESLQVLYYSPTKILIGFNRGLVVIKDRASKYVQSAYLPNGQL-----ESRDG 246 (993)
T ss_pred ccceeeccccc--cccc-------ccccccceeeeecCCCcceeeeeeeeeehhcccccchhhccccccc-----CccCC
Confidence 11112111111 1111 1145555665555555666666677777775544333333221111 18889
Q ss_pred CEEEEEecCCeEEEEEccC
Q psy12614 257 NYLYCAGVDPTVVCFQRTR 275 (708)
Q Consensus 257 ~~l~~~~~dg~i~iw~~~~ 275 (708)
..++++..||.+..||...
T Consensus 247 ~~~v~~h~Dgs~~fWd~s~ 265 (993)
T KOG1983|consen 247 SHFVSYHTDGSYAFWDVSS 265 (993)
T ss_pred ceEEEEEecCCEEeeecCC
Confidence 9999999999999999988
|
|
| >KOG4659|consensus | Back alignment and domain information |
|---|
Probab=94.66 E-value=9.9 Score=43.07 Aligned_cols=84 Identities=8% Similarity=0.001 Sum_probs=43.3
Q ss_pred ceEEEEcCCCCEEEEE------------ecCCcEEEEEcCCCCCCchhhhhhccC----chhhhcCCCCeeEEEeCCCCC
Q psy12614 542 STAMAIHPTLSTLVTV------------YSDHRIVEFDLNRKAFTTFSRKLETNH----PNEWLSRQLPVLGIEFDPQDS 605 (708)
Q Consensus 542 v~~l~~s~d~~~l~~~------------~~dg~i~vwd~~~~~~~~~~~~~~~~~----~~~~~~~~~~i~~l~~s~~~~ 605 (708)
..+++++++|-+.++- +.||+|.+.--....|-+-........ -..-.+|-..+.+++.+|||.
T Consensus 595 ~r~Iavg~~G~lyvaEsD~rriNrvr~~~tdg~i~ilaGa~S~C~C~~~~~cdcfs~~~~~At~A~lnsp~alaVsPdg~ 674 (1899)
T KOG4659|consen 595 QRDIAVGTDGALYVAESDGRRINRVRKLSTDGTISILAGAKSPCSCDVAACCDCFSLRDVAATQAKLNSPYALAVSPDGD 674 (1899)
T ss_pred hhceeecCCceEEEEeccchhhhheEEeccCceEEEecCCCCCCCcccccCCccccccchhhhccccCCcceEEECCCCc
Confidence 3678899988654433 456666666433222221111100000 011234667888899999988
Q ss_pred ceEEEEcCeeEEEEecCCCCCc
Q psy12614 606 SLIYLMDDSALCVINKNKSLAH 627 (708)
Q Consensus 606 ~l~~~~~d~~i~~wd~~~~~~~ 627 (708)
.++.- .|.++|=.++...|.
T Consensus 675 v~IAD--~gN~rIr~Vs~~~~~ 694 (1899)
T KOG4659|consen 675 VIIAD--SGNSRIRKVSARMAK 694 (1899)
T ss_pred EEEec--CCchhhhhhhhcccc
Confidence 54433 444555555544443
|
|
| >TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain | Back alignment and domain information |
|---|
Probab=94.42 E-value=6.2 Score=39.71 Aligned_cols=145 Identities=12% Similarity=0.009 Sum_probs=79.3
Q ss_pred eeEEEEEEccCCEEEEEcC------------CC-cEEEEeCCC--Cee--EEEeeccccCeEEEEEeCCCCEEEEEecCC
Q psy12614 204 TAVWCVAFCADFTIITGDS------------GG-FVRFWDGKT--GVQ--WSDVKTHKKDILALTVSEDENYLYCAGVDP 266 (708)
Q Consensus 204 ~~v~~~~~~~~~~l~~~~~------------dg-~i~~wd~~~--~~~--~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg 266 (708)
.....|+|.++|++.++.. .+ .|.+++-.+ |+. ...+...-.....+++.+++ |+++...
T Consensus 14 ~~P~~ia~d~~G~l~V~e~~~y~~~~~~~~~~~~rI~~l~d~dgdG~~d~~~vfa~~l~~p~Gi~~~~~G--lyV~~~~- 90 (367)
T TIGR02604 14 RNPIAVCFDERGRLWVAEGITYSRPAGRQGPLGDRILILEDADGDGKYDKSNVFAEELSMVTGLAVAVGG--VYVATPP- 90 (367)
T ss_pred CCCceeeECCCCCEEEEeCCcCCCCCCCCCCCCCEEEEEEcCCCCCCcceeEEeecCCCCccceeEecCC--EEEeCCC-
Confidence 4467889999998666532 23 777776543 332 23333333456789999988 4444444
Q ss_pred eEEEE-EccCCcccccCCCCCCCC-cceEEeEEEec----cccceEEEEEe--CCEEEEEcC------------------
Q psy12614 267 TVVCF-QRTRKPQVCSTSGPEQGS-SVWVRSVNRVI----HEGDVKSLALH--GNRLYSGGL------------------ 320 (708)
Q Consensus 267 ~i~iw-~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~----~~~~v~~l~~~--~~~l~s~~~------------------ 320 (708)
.|..| +... . +. .. ..-.....+.. +.+....+.+. |.+.++-+.
T Consensus 91 ~i~~~~d~~g-d------g~--ad~~~~~l~~~~~~~~~~~~~~~~~l~~gpDG~LYv~~G~~~~~~~~~~~~~~~~~~~ 161 (367)
T TIGR02604 91 DILFLRDKDG-D------DK--ADGEREVLLSGFGGQINNHHHSLNSLAWGPDGWLYFNHGNTLASKVTRPGTSDESRQG 161 (367)
T ss_pred eEEEEeCCCC-C------CC--CCCccEEEEEccCCCCCcccccccCceECCCCCEEEecccCCCceeccCCCccCcccc
Confidence 44444 4332 0 10 00 01111122222 23446677776 454444331
Q ss_pred -CCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEEEc
Q psy12614 321 -DSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQY 360 (708)
Q Consensus 321 -d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~ 360 (708)
.+.+..++.++..+..+.........++++++|+++++..
T Consensus 162 ~~g~i~r~~pdg~~~e~~a~G~rnp~Gl~~d~~G~l~~tdn 202 (367)
T TIGR02604 162 LGGGLFRYNPDGGKLRVVAHGFQNPYGHSVDSWGDVFFCDN 202 (367)
T ss_pred cCceEEEEecCCCeEEEEecCcCCCccceECCCCCEEEEcc
Confidence 1445666666666555554455667899999999987743
|
All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs. |
| >KOG3616|consensus | Back alignment and domain information |
|---|
Probab=94.32 E-value=2.6 Score=44.18 Aligned_cols=69 Identities=14% Similarity=0.237 Sum_probs=49.0
Q ss_pred CCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEeCCEEEEEcCCCcEEEEE
Q psy12614 25 EPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWFNDRLFSGGLQGFVNEYD 97 (708)
Q Consensus 25 h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~~~~l~s~~~d~~i~vwd 97 (708)
...-++++.-+|.|.-++.+..||+|++|++...+... ... .. .+-..+.|...-|+++..|..+.-|.
T Consensus 13 ~~e~~~aiqshp~~~s~v~~~~d~si~lfn~~~r~qsk-i~~-~~--~p~~nlv~tnhgl~~~tsdrr~la~~ 81 (1636)
T KOG3616|consen 13 EDEFTTAIQSHPGGQSFVLAHQDGSIILFNFIPRRQSK-ICE-EA--KPKENLVFTNHGLVTATSDRRALAWK 81 (1636)
T ss_pred ccceeeeeeecCCCceEEEEecCCcEEEEeecccchhh-hhh-hc--CCccceeeeccceEEEeccchhheee
Confidence 34567888889999999999999999999998754321 111 11 34455666656677777777777775
|
|
| >COG3823 Glutamine cyclotransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=94.26 E-value=3.5 Score=36.16 Aligned_cols=178 Identities=11% Similarity=0.060 Sum_probs=100.7
Q ss_pred EEEEEe-CCEEEEEcC--CCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEE-EEEeCCCcEEEEEccCCcEEEEEe
Q psy12614 75 ECLTWF-NDRLFSGGL--QGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLL-AAGTEQGHINLFQISDEGLLYEKL 150 (708)
Q Consensus 75 ~~l~~~-~~~l~s~~~--d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l-a~~~~d~~i~iwd~~~~~~~~~~~ 150 (708)
..+.+. |.++.+.+. ...|++||+.+|+.+....-....+..=-...-+.++ +..-.+|.-..+|..+-+..-...
T Consensus 49 QGL~~~~g~i~esTG~yg~S~ir~~~L~~gq~~~s~~l~~~~~FgEGit~~gd~~y~LTw~egvaf~~d~~t~~~lg~~~ 128 (262)
T COG3823 49 QGLEYLDGHILESTGLYGFSKIRVSDLTTGQEIFSEKLAPDTVFGEGITKLGDYFYQLTWKEGVAFKYDADTLEELGRFS 128 (262)
T ss_pred cceeeeCCEEEEeccccccceeEEEeccCceEEEEeecCCccccccceeeccceEEEEEeccceeEEEChHHhhhhcccc
Confidence 345555 555566654 4579999999998776544321122111111122322 223457888888888776653233
Q ss_pred cccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeE---EEEEEccCCE-EEEEcCCCc
Q psy12614 151 LDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAV---WCVAFCADFT-IITGDSGGF 225 (708)
Q Consensus 151 ~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v---~~~~~~~~~~-l~~~~~dg~ 225 (708)
+. +.-..++ .|++.|..+... +++.-|.++.....++..... ..+| +-+.|. ||. ++-.-....
T Consensus 129 y~---GeGWgLt--~d~~~LimsdGsatL~frdP~tfa~~~~v~VT~~-----g~pv~~LNELE~V-dG~lyANVw~t~~ 197 (262)
T COG3823 129 YE---GEGWGLT--SDDKNLIMSDGSATLQFRDPKTFAELDTVQVTDD-----GVPVSKLNELEWV-DGELYANVWQTTR 197 (262)
T ss_pred cC---Ccceeee--cCCcceEeeCCceEEEecCHHHhhhcceEEEEEC-----Ceecccccceeee-ccEEEEeeeeecc
Confidence 33 2234444 456666666666 899988887766666654421 2223 233333 454 444445556
Q ss_pred EEEEeCCCCeeEEEee------------ccccCeEEEEEeCCCCEEEEEe
Q psy12614 226 VRFWDGKTGVQWSDVK------------THKKDILALTVSEDENYLYCAG 263 (708)
Q Consensus 226 i~~wd~~~~~~~~~~~------------~~~~~i~~~~~s~~~~~l~~~~ 263 (708)
|...+.++|+.+..+. .+..-...+++.|++.+++..+
T Consensus 198 I~rI~p~sGrV~~widlS~L~~~~~~~~~~~nvlNGIA~~~~~~r~~iTG 247 (262)
T COG3823 198 IARIDPDSGRVVAWIDLSGLLKELNLDKSNDNVLNGIAHDPQQDRFLITG 247 (262)
T ss_pred eEEEcCCCCcEEEEEEccCCchhcCccccccccccceeecCcCCeEEEec
Confidence 7777777777665542 2344567799999885555443
|
|
| >PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea | Back alignment and domain information |
|---|
Probab=94.19 E-value=6.7 Score=39.14 Aligned_cols=190 Identities=13% Similarity=0.127 Sum_probs=96.4
Q ss_pred CCEEEEEc-CCCcEEEEECCC----CeEeEEEee---cC----CceEEEEEecCCCEEEEEe--C----CCcEEEEEccC
Q psy12614 81 NDRLFSGG-LQGFVNEYDMRR----LNIKSSTAV---TS----GTCWCLSVHKKKRLLAAGT--E----QGHINLFQISD 142 (708)
Q Consensus 81 ~~~l~s~~-~d~~i~vwd~~~----~~~~~~~~~---~~----~~v~~~~~s~~~~~la~~~--~----d~~i~iwd~~~ 142 (708)
.++|+..+ .++.|.|.|+.+ -+..+.+.. +. .....+..-|+|+.++++- . -|.+.+.|-++
T Consensus 87 Rr~Li~PgL~SsrIyviD~~~dPr~P~l~KvIe~~ev~~k~g~s~PHT~Hclp~G~imIS~lGd~~G~g~Ggf~llD~~t 166 (461)
T PF05694_consen 87 RRYLILPGLRSSRIYVIDTKTDPRKPRLHKVIEPEEVFEKTGLSRPHTVHCLPDGRIMISALGDADGNGPGGFVLLDGET 166 (461)
T ss_dssp S-EEEEEBTTT--EEEEE--S-TTS-EEEEEE-HHHHHHHH-EEEEEEEEE-SS--EEEEEEEETTS-S--EEEEE-TTT
T ss_pred CCcEEeeeeccCcEEEEECCCCCCCCceEeeeCHHHHHhhcCCCCCceeeecCCccEEEEeccCCCCCCCCcEEEEcCcc
Confidence 45666666 788999999884 334444442 11 2233455567888887752 2 34577888777
Q ss_pred CcEEEEEecccc-cccEEEEEECCCCCEEEEecC--------------------C-eEEEEEcCCCceEEEEEecccCCC
Q psy12614 143 EGLLYEKLLDRQ-QGRILCTAWHSSGDYLVTGCA--------------------A-AVRVWDIHKGHAIHKMSLDKSSKF 200 (708)
Q Consensus 143 ~~~~~~~~~~~~-~~~v~~~~~s~d~~~l~~~~~--------------------d-~i~iwd~~~~~~~~~~~~~~~~~~ 200 (708)
-++.-....... ..--..+-|.|..+.+++... . ++.+||+.+.+.++.+..+.
T Consensus 167 f~v~g~We~~~~~~~~gYDfw~qpr~nvMiSSeWg~P~~~~~Gf~~~d~~~~~yG~~l~vWD~~~r~~~Q~idLg~---- 242 (461)
T PF05694_consen 167 FEVKGRWEKDRGPQPFGYDFWYQPRHNVMISSEWGAPSMFEKGFNPEDLEAGKYGHSLHVWDWSTRKLLQTIDLGE---- 242 (461)
T ss_dssp --EEEE--SB-TT------EEEETTTTEEEE-B---HHHHTT---TTTHHHH-S--EEEEEETTTTEEEEEEES-T----
T ss_pred ccccceeccCCCCCCCCCCeEEcCCCCEEEEeccCChhhcccCCChhHhhcccccCeEEEEECCCCcEeeEEecCC----
Confidence 666522222111 223456667787777776542 3 69999999999999999873
Q ss_pred CCceeEEEEEEccC--C-E-EEEEcCCCcEEEEeC-CCCe----eEEEeecc-----------------ccCeEEEEEeC
Q psy12614 201 SKNTAVWCVAFCAD--F-T-IITGDSGGFVRFWDG-KTGV----QWSDVKTH-----------------KKDILALTVSE 254 (708)
Q Consensus 201 ~~~~~v~~~~~~~~--~-~-l~~~~~dg~i~~wd~-~~~~----~~~~~~~~-----------------~~~i~~~~~s~ 254 (708)
.......+.|..+ . . ++.+....+|..|-- +.++ .+..+... ..-|+.+.+|.
T Consensus 243 -~g~~pLEvRflH~P~~~~gFvg~aLss~i~~~~k~~~g~W~a~kVi~ip~~~v~~~~lp~ml~~~~~~P~LitDI~iSl 321 (461)
T PF05694_consen 243 -EGQMPLEVRFLHDPDANYGFVGCALSSSIWRFYKDDDGEWAAEKVIDIPAKKVEGWILPEMLKPFGAVPPLITDILISL 321 (461)
T ss_dssp -TEEEEEEEEE-SSTT--EEEEEEE--EEEEEEEE-ETTEEEEEEEEEE--EE--SS---GGGGGG-EE------EEE-T
T ss_pred -CCCceEEEEecCCCCccceEEEEeccceEEEEEEcCCCCeeeeEEEECCCcccCcccccccccccccCCCceEeEEEcc
Confidence 2345667777654 3 2 665556666666543 3342 12222111 34578999999
Q ss_pred CCCEEEEEe-cCCeEEEEEccC
Q psy12614 255 DENYLYCAG-VDPTVVCFQRTR 275 (708)
Q Consensus 255 ~~~~l~~~~-~dg~i~iw~~~~ 275 (708)
|.++|+..+ ..|.|+.||+..
T Consensus 322 DDrfLYvs~W~~GdvrqYDISD 343 (461)
T PF05694_consen 322 DDRFLYVSNWLHGDVRQYDISD 343 (461)
T ss_dssp TS-EEEEEETTTTEEEEEE-SS
T ss_pred CCCEEEEEcccCCcEEEEecCC
Confidence 999998665 589999999987
|
The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A. |
| >COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=94.05 E-value=1.5 Score=43.69 Aligned_cols=146 Identities=12% Similarity=0.096 Sum_probs=92.5
Q ss_pred CCCEEE-EEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCC--------CEEEEecCCeEEEEEcCC-CceEEE
Q psy12614 122 KKRLLA-AGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSG--------DYLVTGCAAAVRVWDIHK-GHAIHK 191 (708)
Q Consensus 122 ~~~~la-~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~--------~~l~~~~~d~i~iwd~~~-~~~~~~ 191 (708)
|..+|. .|+....++-.|++.|+++ ....-|.. | -+.|.|+. +.|+-.+...|.-.|.+- |..+..
T Consensus 478 dssli~~dg~~~~kLykmDIErGkvv--eeW~~~dd-v-vVqy~p~~kf~qmt~eqtlvGlS~~svFrIDPR~~gNKi~v 553 (776)
T COG5167 478 DSSLIYLDGGERDKLYKMDIERGKVV--EEWDLKDD-V-VVQYNPYFKFQQMTDEQTLVGLSDYSVFRIDPRARGNKIKV 553 (776)
T ss_pred CcceEEecCCCcccceeeecccceee--eEeecCCc-c-eeecCCchhHHhcCccceEEeecccceEEecccccCCceee
Confidence 444444 3455567888889999887 34444444 3 56777753 344444444666667653 322221
Q ss_pred EEecccCCCCCceeEEEEEEccCCEEEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEE
Q psy12614 192 MSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCF 271 (708)
Q Consensus 192 ~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw 271 (708)
.... .|.......+..-...|.+++++..|.|++||--.-+....+++....|..+..+.+|.++++.+. ..+.+-
T Consensus 554 ~esK---dY~tKn~Fss~~tTesGyIa~as~kGDirLyDRig~rAKtalP~lG~aIk~idvta~Gk~ilaTCk-~yllL~ 629 (776)
T COG5167 554 VESK---DYKTKNKFSSGMTTESGYIAAASRKGDIRLYDRIGKRAKTALPGLGDAIKHIDVTANGKHILATCK-NYLLLT 629 (776)
T ss_pred eeeh---hccccccccccccccCceEEEecCCCceeeehhhcchhhhcCcccccceeeeEeecCCcEEEEeec-ceEEEE
Confidence 1110 111133344555556778999999999999995443444557788899999999999999988775 477777
Q ss_pred EccC
Q psy12614 272 QRTR 275 (708)
Q Consensus 272 ~~~~ 275 (708)
|+.-
T Consensus 630 d~~i 633 (776)
T COG5167 630 DVPI 633 (776)
T ss_pred eccc
Confidence 7764
|
|
| >KOG3630|consensus | Back alignment and domain information |
|---|
Probab=94.04 E-value=0.31 Score=53.29 Aligned_cols=147 Identities=12% Similarity=0.047 Sum_probs=92.9
Q ss_pred CcEEEEEEcCCCCEEEEEe--CCCcEEEEeCCCCCe----EEEEEecCC----CCCcEEEEEEe---CCEEEEEcCCCcE
Q psy12614 27 KVINCIACEPKSSRLAVSR--ADQSIEIWDISETPH----VDRVFIGDP----LSNSIECLTWF---NDRLFSGGLQGFV 93 (708)
Q Consensus 27 ~~v~~~~~s~~~~~la~~~--~dg~v~iwd~~~~~~----~~~~~~~h~----~~~~v~~l~~~---~~~l~s~~~d~~i 93 (708)
-.|..+...+|++..++.. .+-.|..||+.+-.. ..+.|..|. -..-..++.|+ ....+++..|+.|
T Consensus 101 ~pi~~~v~~~D~t~s~v~~tsng~~v~~fD~~~fs~s~~~~~~pl~~s~ts~ek~vf~~~~~wnP~vp~n~av~l~dlsl 180 (1405)
T KOG3630|consen 101 IPIVIFVCFHDATDSVVVSTSNGEAVYSFDLEEFSESRYETTVPLKNSATSFEKPVFQLKNVWNPLVPLNSAVDLSDLSL 180 (1405)
T ss_pred ccceEEEeccCCceEEEEEecCCceEEEEehHhhhhhhhhhccccccccchhccccccccccccCCccchhhhhccccch
Confidence 4566777788887766543 333688889875211 111222222 01345667777 5566777889999
Q ss_pred EEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEeccc-ccccEEEEEECCCCCEEEE
Q psy12614 94 NEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDR-QQGRILCTAWHSSGDYLVT 172 (708)
Q Consensus 94 ~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~v~~~~~s~d~~~l~~ 172 (708)
++..+........--.-....+|++|+|.|+.++.|-..|++.-|...-..........- ...+|.+++|-..-.++++
T Consensus 181 ~V~~~~~~~~~v~s~p~t~~~Tav~WSprGKQl~iG~nnGt~vQy~P~leik~~ip~Pp~~e~yrvl~v~Wl~t~eflvv 260 (1405)
T KOG3630|consen 181 RVKSTKQLAQNVTSFPVTNSQTAVLWSPRGKQLFIGRNNGTEVQYEPSLEIKSEIPEPPVEENYRVLSVTWLSTQEFLVV 260 (1405)
T ss_pred hhhhhhhhhhhhcccCcccceeeEEeccccceeeEecCCCeEEEeecccceeecccCCCcCCCcceeEEEEecceeEEEE
Confidence 888766544333222345678999999999999999999999988765432211011111 1478999999877777765
Q ss_pred e
Q psy12614 173 G 173 (708)
Q Consensus 173 ~ 173 (708)
-
T Consensus 261 y 261 (1405)
T KOG3630|consen 261 Y 261 (1405)
T ss_pred e
Confidence 3
|
|
| >COG4257 Vgb Streptogramin lyase [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=93.89 E-value=5.2 Score=36.81 Aligned_cols=249 Identities=11% Similarity=0.042 Sum_probs=149.3
Q ss_pred CCEEEEEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEE-ecccccccEE
Q psy12614 81 NDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEK-LLDRQQGRIL 159 (708)
Q Consensus 81 ~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~-~~~~~~~~v~ 159 (708)
|..-+++...+.|=-.|-.+|+....--+....-..+..-|||..-++-+.. .|.-.|-++.+...-. ....-.....
T Consensus 73 G~VWft~qg~gaiGhLdP~tGev~~ypLg~Ga~Phgiv~gpdg~~Witd~~~-aI~R~dpkt~evt~f~lp~~~a~~nle 151 (353)
T COG4257 73 GAVWFTAQGTGAIGHLDPATGEVETYPLGSGASPHGIVVGPDGSAWITDTGL-AIGRLDPKTLEVTRFPLPLEHADANLE 151 (353)
T ss_pred CceEEecCccccceecCCCCCceEEEecCCCCCCceEEECCCCCeeEecCcc-eeEEecCcccceEEeecccccCCCccc
Confidence 3344555556666666777777666655666677788888998876653332 5666677666654211 1222245678
Q ss_pred EEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCeeE
Q psy12614 160 CTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQW 237 (708)
Q Consensus 160 ~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~ 237 (708)
...|.+.|++-.++... .=++ |..+ ..+..+.... ....+.|+..|||. .++.-.+..|...|..++..
T Consensus 152 t~vfD~~G~lWFt~q~G~yGrL-dPa~-~~i~vfpaPq------G~gpyGi~atpdGsvwyaslagnaiaridp~~~~a- 222 (353)
T COG4257 152 TAVFDPWGNLWFTGQIGAYGRL-DPAR-NVISVFPAPQ------GGGPYGICATPDGSVWYASLAGNAIARIDPFAGHA- 222 (353)
T ss_pred ceeeCCCccEEEeeccccceec-Cccc-CceeeeccCC------CCCCcceEECCCCcEEEEeccccceEEcccccCCc-
Confidence 88999999998888755 2111 2111 1222222221 44466788899997 44545566777777766622
Q ss_pred EEee---ccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--C
Q psy12614 238 SDVK---THKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--G 312 (708)
Q Consensus 238 ~~~~---~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~ 312 (708)
..+. ........+-.+|.|+.-++....+.+..||... ..|. ...+.+....-.++-.. +
T Consensus 223 ev~p~P~~~~~gsRriwsdpig~~wittwg~g~l~rfdPs~--------------~sW~-eypLPgs~arpys~rVD~~g 287 (353)
T COG4257 223 EVVPQPNALKAGSRRIWSDPIGRAWITTWGTGSLHRFDPSV--------------TSWI-EYPLPGSKARPYSMRVDRHG 287 (353)
T ss_pred ceecCCCcccccccccccCccCcEEEeccCCceeeEeCccc--------------ccce-eeeCCCCCCCcceeeeccCC
Confidence 2221 2233445666778887777777777888887766 2353 34455555555666665 4
Q ss_pred CEEEEEcCCCeEEEEeCCCCceeecCccCCCCceEEEEcCCc
Q psy12614 313 NRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQ 354 (708)
Q Consensus 313 ~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~ 354 (708)
..-.+--..+.|.-+|.++..+..++.+.+....+.+.....
T Consensus 288 rVW~sea~agai~rfdpeta~ftv~p~pr~n~gn~ql~gr~g 329 (353)
T COG4257 288 RVWLSEADAGAIGRFDPETARFTVLPIPRPNSGNIQLDGRPG 329 (353)
T ss_pred cEEeeccccCceeecCcccceEEEecCCCCCCCceeccCCCC
Confidence 444445556677777777777777765555555555554443
|
|
| >PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes [] | Back alignment and domain information |
|---|
Probab=93.77 E-value=2.9 Score=44.81 Aligned_cols=143 Identities=17% Similarity=0.239 Sum_probs=90.7
Q ss_pred CCEEEEEeCCCcEEEEeCCCCCeEEE-----EE-e-------cC------CCCCcEEEEEEe----CCEEEEEcCCCcEE
Q psy12614 38 SSRLAVSRADQSIEIWDISETPHVDR-----VF-I-------GD------PLSNSIECLTWF----NDRLFSGGLQGFVN 94 (708)
Q Consensus 38 ~~~la~~~~dg~v~iwd~~~~~~~~~-----~~-~-------~h------~~~~~v~~l~~~----~~~l~s~~~d~~i~ 94 (708)
+.+|++|. .+.|.||++..-..+.. .+ . .. .....|+.|... ...|+.+..||.|.
T Consensus 49 ~n~LFiA~-~s~I~Vy~~d~l~~~p~~~p~~~~~t~p~~~~~~D~~~s~~p~PHtIN~i~v~~lg~~EVLl~c~DdG~V~ 127 (717)
T PF08728_consen 49 RNLLFIAY-QSEIYVYDPDGLTQLPSRKPCLRFDTKPEFTSTPDRLISTWPFPHTINFIKVGDLGGEEVLLLCTDDGDVL 127 (717)
T ss_pred CCEEEEEE-CCEEEEEecCCcccccccccccccccCccccccccccccCCCCCceeeEEEecccCCeeEEEEEecCCeEE
Confidence 77888876 56999999875222110 00 0 00 012457777665 56889999999999
Q ss_pred EEECCC-------C-------------eEeEEEeecCCceEEEEEe--cCCCEEEEEeCCCcEEEEEccCC--cEEEEEe
Q psy12614 95 EYDMRR-------L-------------NIKSSTAVTSGTCWCLSVH--KKKRLLAAGTEQGHINLFQISDE--GLLYEKL 150 (708)
Q Consensus 95 vwd~~~-------~-------------~~~~~~~~~~~~v~~~~~s--~~~~~la~~~~d~~i~iwd~~~~--~~~~~~~ 150 (708)
+|.+++ . ++...+. -...+|.++++ ...+++|+++....|.||-.... +... ..
T Consensus 128 ~Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~f~~~-v~~SaWGLdIh~~~~~rlIAVSsNs~~VTVFaf~l~~~r~~~-~~ 205 (717)
T PF08728_consen 128 AYYTETIIEAIERFSEDNDSGFSRLKIKPFFHLR-VGASAWGLDIHDYKKSRLIAVSSNSQEVTVFAFALVDERFYH-VP 205 (717)
T ss_pred EEEHHHHHHHHHhhccccccccccccCCCCeEee-cCCceeEEEEEecCcceEEEEecCCceEEEEEEecccccccc-cc
Confidence 996522 1 0122222 34589999999 78888999888888888876542 2211 11
Q ss_pred cccccccEEEEEECCCC-----C-EEEEecCC-eEEEEEc
Q psy12614 151 LDRQQGRILCTAWHSSG-----D-YLVTGCAA-AVRVWDI 183 (708)
Q Consensus 151 ~~~~~~~v~~~~~s~d~-----~-~l~~~~~d-~i~iwd~ 183 (708)
-..+...|.+|+|-++. . .|++++-. .+.+|++
T Consensus 206 s~~~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G~v~~~~I 245 (717)
T PF08728_consen 206 SHQHSHNIPNVSFLDDDLDPNGHVKVVATDISGEVWTFKI 245 (717)
T ss_pred ccccccCCCeeEeecCCCCCccceEEEEEeccCcEEEEEE
Confidence 12356778999997654 2 66667766 7777665
|
RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance []. |
| >COG1520 FOG: WD40-like repeat [Function unknown] | Back alignment and domain information |
|---|
Probab=93.76 E-value=8.5 Score=38.86 Aligned_cols=221 Identities=16% Similarity=0.122 Sum_probs=122.2
Q ss_pred EEEEEeCCCcEEEEeCCCCCeEEEE-EecCCCCCcEEEEEEe-CCEEEEEcCCCcEEEEECCCCeEeEEEeecC-CceEE
Q psy12614 40 RLAVSRADQSIEIWDISETPHVDRV-FIGDPLSNSIECLTWF-NDRLFSGGLQGFVNEYDMRRLNIKSSTAVTS-GTCWC 116 (708)
Q Consensus 40 ~la~~~~dg~v~iwd~~~~~~~~~~-~~~h~~~~~v~~l~~~-~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~-~~v~~ 116 (708)
.+.++..+|.|.-.|..++..+-.. +.+.. ..+..-.+. ...++.++.++.+...|..+|+.+....... ..+..
T Consensus 70 ~v~~~~~~G~i~A~d~~~g~~~W~~~~~~~~--~~~~~~~~~~~G~i~~g~~~g~~y~ld~~~G~~~W~~~~~~~~~~~~ 147 (370)
T COG1520 70 TVYVGTRDGNIFALNPDTGLVKWSYPLLGAV--AQLSGPILGSDGKIYVGSWDGKLYALDASTGTLVWSRNVGGSPYYAS 147 (370)
T ss_pred eEEEecCCCcEEEEeCCCCcEEecccCcCcc--eeccCceEEeCCeEEEecccceEEEEECCCCcEEEEEecCCCeEEec
Confidence 3445567888888888887753111 11101 122222222 5668899999999999999999988887665 12222
Q ss_pred EEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEeccc-ccccEEEEEECCCCCEEEEecC--C-eEEEEEcCCCceEEEE
Q psy12614 117 LSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDR-QQGRILCTAWHSSGDYLVTGCA--A-AVRVWDIHKGHAIHKM 192 (708)
Q Consensus 117 ~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~v~~~~~s~d~~~l~~~~~--d-~i~iwd~~~~~~~~~~ 192 (708)
-..-.++ .+..++.++.+...|..+++......... -...+..-....++ .++.+.. + .+.-.|+++|......
T Consensus 148 ~~v~~~~-~v~~~s~~g~~~al~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~-~vy~~~~~~~~~~~a~~~~~G~~~w~~ 225 (370)
T COG1520 148 PPVVGDG-TVYVGTDDGHLYALNADTGTLKWTYETPAPLSLSIYGSPAIASG-TVYVGSDGYDGILYALNAEDGTLKWSQ 225 (370)
T ss_pred CcEEcCc-EEEEecCCCeEEEEEccCCcEEEEEecCCccccccccCceeecc-eEEEecCCCcceEEEEEccCCcEeeee
Confidence 2223333 33334477888888888888765433321 11111111112233 3444444 5 7888888888888775
Q ss_pred EecccCCCCCceeE---EEE---EEccCCEEEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEE---e
Q psy12614 193 SLDKSSKFSKNTAV---WCV---AFCADFTIITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCA---G 263 (708)
Q Consensus 193 ~~~~~~~~~~~~~v---~~~---~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~---~ 263 (708)
....... ...+ ..+ ...-++.+..++.++.+...|..+|+.+-.+... ..-++..+.+. .
T Consensus 226 ~~~~~~~---~~~~~~~~~~~~~~v~v~~~~~~~~~~g~~~~l~~~~G~~~W~~~~~--------~~~~~~~~~~~~~~~ 294 (370)
T COG1520 226 KVSQTIG---RTAISTTPAVDGGPVYVDGGVYAGSYGGKLLCLDADTGELIWSFPAG--------GSVQGSGLYTTPVAG 294 (370)
T ss_pred eeecccC---cccccccccccCceEEECCcEEEEecCCeEEEEEcCCCceEEEEecc--------cEeccCCeeEEeecC
Confidence 4322110 1111 011 1111334567778888999999999998887653 11111112221 1
Q ss_pred cCCeEEEEEccC
Q psy12614 264 VDPTVVCFQRTR 275 (708)
Q Consensus 264 ~dg~i~iw~~~~ 275 (708)
.||.+.++....
T Consensus 295 ~dG~v~~~~~~~ 306 (370)
T COG1520 295 ADGKVYIGFTDN 306 (370)
T ss_pred CCccEEEEEecc
Confidence 478888876554
|
|
| >PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs | Back alignment and domain information |
|---|
Probab=93.75 E-value=6 Score=43.29 Aligned_cols=95 Identities=20% Similarity=0.236 Sum_probs=64.2
Q ss_pred CCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe-CCEEEEEcCCCcEEEEECCCCeEe
Q psy12614 26 PKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF-NDRLFSGGLQGFVNEYDMRRLNIK 104 (708)
Q Consensus 26 ~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~-~~~l~s~~~d~~i~vwd~~~~~~~ 104 (708)
.-.|..+.+||+|++||..+..| |.|-.+....-....+.+-. ..|.|=.+. +..++..+
T Consensus 84 ~f~v~~i~~n~~g~~lal~G~~~-v~V~~LP~r~g~~~~~~~g~--~~i~Crt~~v~~~~~~~~---------------- 144 (717)
T PF10168_consen 84 LFEVHQISLNPTGSLLALVGPRG-VVVLELPRRWGKNGEFEDGK--KEINCRTVPVDERFFTSN---------------- 144 (717)
T ss_pred ceeEEEEEECCCCCEEEEEcCCc-EEEEEeccccCccccccCCC--cceeEEEEEechhhccCC----------------
Confidence 34689999999999999988764 55655543211111344444 566665555 44444322
Q ss_pred EEEeecCCceEEEEEecC---CCEEEEEeCCCcEEEEEccCCc
Q psy12614 105 SSTAVTSGTCWCLSVHKK---KRLLAAGTEQGHINLFQISDEG 144 (708)
Q Consensus 105 ~~~~~~~~~v~~~~~s~~---~~~la~~~~d~~i~iwd~~~~~ 144 (708)
+...|..+.|+|. +..|++-+.|+.+++||+....
T Consensus 145 -----~~~~i~qv~WhP~s~~~~~l~vLtsdn~lR~y~~~~~~ 182 (717)
T PF10168_consen 145 -----SSLEIKQVRWHPWSESDSHLVVLTSDNTLRLYDISDPQ 182 (717)
T ss_pred -----CCceEEEEEEcCCCCCCCeEEEEecCCEEEEEecCCCC
Confidence 3356888999986 5789999999999999997543
|
It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells []. |
| >COG4590 ABC-type uncharacterized transport system, permease component [General function prediction only] | Back alignment and domain information |
|---|
Probab=93.71 E-value=0.33 Score=47.32 Aligned_cols=165 Identities=15% Similarity=0.198 Sum_probs=103.4
Q ss_pred eeeccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecC-CCCC---cEE-EEE-Ee-CCEEEEEcCCC
Q psy12614 19 IKFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGD-PLSN---SIE-CLT-WF-NDRLFSGGLQG 91 (708)
Q Consensus 19 ~~~~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h-~~~~---~v~-~l~-~~-~~~l~s~~~d~ 91 (708)
++.+....+.|..+-..|||++|.+-+. .++.|+++.+.....+.+-.. . +. .|+ ++. .+ |.-|.++..||
T Consensus 213 i~~L~~~~~~v~qllL~Pdg~~LYv~~g-~~~~v~~L~~r~l~~rkl~~dsp-g~~~~~Vte~l~lL~Gg~SLLv~~~dG 290 (733)
T COG4590 213 IRLLSVPFSDVSQLLLTPDGKTLYVRTG-SELVVALLDKRSLQIRKLVDDSP-GDSRHQVTEQLYLLSGGFSLLVVHEDG 290 (733)
T ss_pred hhhcCCCccchHhhEECCCCCEEEEecC-CeEEEEeecccccchhhhhhcCC-CchHHHHHHHHHHHhCceeEEEEcCCC
Confidence 4456677788999999999999888655 589999998754432222211 2 11 122 122 22 77889999999
Q ss_pred cEEEE-ECCCC-e----EeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECC
Q psy12614 92 FVNEY-DMRRL-N----IKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHS 165 (708)
Q Consensus 92 ~i~vw-d~~~~-~----~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~ 165 (708)
.|.-| |+..+ . .++.++-....+..+.-..+.+-+++-+..|++.++.....+... +..--..+.-+++||
T Consensus 291 ~vsQWFdvr~~~~p~l~h~R~f~l~pa~~~~l~pe~~rkgF~~l~~~G~L~~f~st~~~~lL---~~~~~~~~~~~~~Sp 367 (733)
T COG4590 291 LVSQWFDVRRDGQPHLNHIRNFKLAPAEVQFLLPETNRKGFYSLYRNGTLQSFYSTSEKLLL---FERAYQAPQLVAMSP 367 (733)
T ss_pred ceeeeeeeecCCCCcceeeeccccCcccceeeccccccceEEEEcCCCceeeeecccCccee---hhhhhcCcceeeeCc
Confidence 99988 44332 1 222233333444444433344556777788888887655554432 222233567789999
Q ss_pred CCCEEEEecCCeEEEEEcCCCce
Q psy12614 166 SGDYLVTGCAAAVRVWDIHKGHA 188 (708)
Q Consensus 166 d~~~l~~~~~d~i~iwd~~~~~~ 188 (708)
.+.+|++-....++++.+++...
T Consensus 368 ~~~~Ll~e~~gki~~~~l~Nr~P 390 (733)
T COG4590 368 NQAYLLSEDQGKIRLAQLENRNP 390 (733)
T ss_pred ccchheeecCCceEEEEecCCCC
Confidence 99999987666888888776443
|
|
| >PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length | Back alignment and domain information |
|---|
Probab=93.59 E-value=2.6 Score=44.68 Aligned_cols=110 Identities=13% Similarity=0.122 Sum_probs=72.9
Q ss_pred CcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe----CCEEEEEcCCCcEEEEECC---
Q psy12614 27 KVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF----NDRLFSGGLQGFVNEYDMR--- 99 (708)
Q Consensus 27 ~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~----~~~l~s~~~d~~i~vwd~~--- 99 (708)
...+-+.-|.-++..++-+....+.|||...+......--... +.|..+.|. ++.+++.|..+.|.++--.
T Consensus 30 ~~~~li~gss~~k~a~V~~~~~~LtIWD~~~~~lE~~~~f~~~--~~I~dLDWtst~d~qsiLaVGf~~~v~l~~Q~R~d 107 (631)
T PF12234_consen 30 SNPSLISGSSIKKIAVVDSSRSELTIWDTRSGVLEYEESFSED--DPIRDLDWTSTPDGQSILAVGFPHHVLLYTQLRYD 107 (631)
T ss_pred CCcceEeecccCcEEEEECCCCEEEEEEcCCcEEEEeeeecCC--CceeeceeeecCCCCEEEEEEcCcEEEEEEccchh
Confidence 3455555555566555545556799999998764332221334 799999998 8899999999999998531
Q ss_pred --C----CeEeEEE--eecC-CceEEEEEecCCCEEEEEeCCCcEEEEEc
Q psy12614 100 --R----LNIKSST--AVTS-GTCWCLSVHKKKRLLAAGTEQGHINLFQI 140 (708)
Q Consensus 100 --~----~~~~~~~--~~~~-~~v~~~~~s~~~~~la~~~~d~~i~iwd~ 140 (708)
. -.+++.+ ..|+ .+|.+..|.++|.+++.+ .+.+.|+|-
T Consensus 108 y~~~~p~w~~i~~i~i~~~T~h~Igds~Wl~~G~LvV~s--GNqlfv~dk 155 (631)
T PF12234_consen 108 YTNKGPSWAPIRKIDISSHTPHPIGDSIWLKDGTLVVGS--GNQLFVFDK 155 (631)
T ss_pred hhcCCcccceeEEEEeecCCCCCccceeEecCCeEEEEe--CCEEEEECC
Confidence 1 1233333 2333 578999999999766544 356888763
|
This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits. |
| >PHA02790 Kelch-like protein; Provisional | Back alignment and domain information |
|---|
Probab=93.38 E-value=5.4 Score=41.88 Aligned_cols=182 Identities=11% Similarity=0.050 Sum_probs=88.1
Q ss_pred CCEEEEEcCCC-----cEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCC--CcEEEEEccCCcEEEEEeccc
Q psy12614 81 NDRLFSGGLQG-----FVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQ--GHINLFQISDEGLLYEKLLDR 153 (708)
Q Consensus 81 ~~~l~s~~~d~-----~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d--~~i~iwd~~~~~~~~~~~~~~ 153 (708)
+..++.||.++ ++..||..+++-...-.-...........-++...+.|+.+ ..+..||..++.......+..
T Consensus 272 ~~lyviGG~~~~~~~~~v~~Ydp~~~~W~~~~~m~~~r~~~~~v~~~~~iYviGG~~~~~sve~ydp~~n~W~~~~~l~~ 351 (480)
T PHA02790 272 EVVYLIGGWMNNEIHNNAIAVNYISNNWIPIPPMNSPRLYASGVPANNKLYVVGGLPNPTSVERWFHGDAAWVNMPSLLK 351 (480)
T ss_pred CEEEEEcCCCCCCcCCeEEEEECCCCEEEECCCCCchhhcceEEEECCEEEEECCcCCCCceEEEECCCCeEEECCCCCC
Confidence 44456666442 46678877755322111111111111223467777777753 458888887776643233321
Q ss_pred ccccEEEEEECCCCCEEEEecCC----eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEEEEcCCCcEEEE
Q psy12614 154 QQGRILCTAWHSSGDYLVTGCAA----AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFW 229 (708)
Q Consensus 154 ~~~~v~~~~~s~d~~~l~~~~~d----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~w 229 (708)
.......+. -+|+..+.|+.+ .+..||..+++-...-.... ...-.++ ..-+|++.+.+ |.+.+|
T Consensus 352 ~r~~~~~~~--~~g~IYviGG~~~~~~~ve~ydp~~~~W~~~~~m~~------~r~~~~~-~~~~~~IYv~G--G~~e~y 420 (480)
T PHA02790 352 PRCNPAVAS--INNVIYVIGGHSETDTTTEYLLPNHDQWQFGPSTYY------PHYKSCA-LVFGRRLFLVG--RNAEFY 420 (480)
T ss_pred CCcccEEEE--ECCEEEEecCcCCCCccEEEEeCCCCEEEeCCCCCC------ccccceE-EEECCEEEEEC--CceEEe
Confidence 111111222 256666666643 47788887654332211110 1111122 23366644433 457789
Q ss_pred eCCCCeeE--EEeeccccCeEEEEEeCCCCEEEEEecC-----CeEEEEEccC
Q psy12614 230 DGKTGVQW--SDVKTHKKDILALTVSEDENYLYCAGVD-----PTVVCFQRTR 275 (708)
Q Consensus 230 d~~~~~~~--~~~~~~~~~i~~~~~s~~~~~l~~~~~d-----g~i~iw~~~~ 275 (708)
|.++++-. ..+....... +++. -+++..+.||.+ ..+..||..+
T Consensus 421 dp~~~~W~~~~~m~~~r~~~-~~~v-~~~~IYviGG~~~~~~~~~ve~Yd~~~ 471 (480)
T PHA02790 421 CESSNTWTLIDDPIYPRDNP-ELII-VDNKLLLIGGFYRGSYIDTIEVYNNRT 471 (480)
T ss_pred cCCCCcEeEcCCCCCCcccc-EEEE-ECCEEEEECCcCCCcccceEEEEECCC
Confidence 88766432 2222212222 2222 356667777654 3577888776
|
|
| >KOG3630|consensus | Back alignment and domain information |
|---|
Probab=93.28 E-value=1.5 Score=48.44 Aligned_cols=182 Identities=10% Similarity=0.037 Sum_probs=102.9
Q ss_pred EEEEEcCCCCEEEEEeCCCcEEEEeCCC-----------CCeEE----EEEecCCCCCcEEEE-EEe-CCEEE--EEcCC
Q psy12614 30 NCIACEPKSSRLAVSRADQSIEIWDISE-----------TPHVD----RVFIGDPLSNSIECL-TWF-NDRLF--SGGLQ 90 (708)
Q Consensus 30 ~~~~~s~~~~~la~~~~dg~v~iwd~~~-----------~~~~~----~~~~~h~~~~~v~~l-~~~-~~~l~--s~~~d 90 (708)
+.++.++.-.++++++..+.+.|+-..+ ...+. ..+.-|. .-+|..+ +++ +...+ ..+.+
T Consensus 45 n~la~sn~ysl~Fa~~nsk~L~vfgtknlLi~~it~D~~n~~Vd~~~~~t~~v~k-~~pi~~~v~~~D~t~s~v~~tsng 123 (1405)
T KOG3630|consen 45 NNLAISNSYSLFFAASNSKSLAVFGTKNLLIDHITSDSTNSLVDADENLTFKVEK-EIPIVIFVCFHDATDSVVVSTSNG 123 (1405)
T ss_pred hhhhcccccceEEEecCCcceeeeccccceeecccccccccccccccccceeeec-cccceEEEeccCCceEEEEEecCC
Confidence 4566666655666666666666654332 00000 1222222 1233333 333 33333 33344
Q ss_pred CcEEEEECCCCeE-----eEEEe------ecCCceEEEEEecCCC-EEEEEeCCCcEEEEEccCCcEEEEEecccccccE
Q psy12614 91 GFVNEYDMRRLNI-----KSSTA------VTSGTCWCLSVHKKKR-LLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRI 158 (708)
Q Consensus 91 ~~i~vwd~~~~~~-----~~~~~------~~~~~v~~~~~s~~~~-~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v 158 (708)
-.|..+|+++-.. ...+. .......++.|+|.-. ..|+...|+.|++..+....... .. .......
T Consensus 124 ~~v~~fD~~~fs~s~~~~~~pl~~s~ts~ek~vf~~~~~wnP~vp~n~av~l~dlsl~V~~~~~~~~~v-~s-~p~t~~~ 201 (1405)
T KOG3630|consen 124 EAVYSFDLEEFSESRYETTVPLKNSATSFEKPVFQLKNVWNPLVPLNSAVDLSDLSLRVKSTKQLAQNV-TS-FPVTNSQ 201 (1405)
T ss_pred ceEEEEehHhhhhhhhhhccccccccchhccccccccccccCCccchhhhhccccchhhhhhhhhhhhh-cc-cCcccce
Confidence 4788899876321 11111 2234566788888533 34566778889888766433321 11 2335678
Q ss_pred EEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEE
Q psy12614 159 LCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTII 218 (708)
Q Consensus 159 ~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~ 218 (708)
++++|+|.|+.++.|-.+ ++.-|... ++....+..... .....|.+++|.....++
T Consensus 202 Tav~WSprGKQl~iG~nnGt~vQy~P~-leik~~ip~Pp~---~e~yrvl~v~Wl~t~efl 258 (1405)
T KOG3630|consen 202 TAVLWSPRGKQLFIGRNNGTEVQYEPS-LEIKSEIPEPPV---EENYRVLSVTWLSTQEFL 258 (1405)
T ss_pred eeEEeccccceeeEecCCCeEEEeecc-cceeecccCCCc---CCCcceeEEEEecceeEE
Confidence 999999999999999988 88877753 444444443321 225789999998766543
|
|
| >PF07250 Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterPro: IPR009880 This entry represents the N terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes | Back alignment and domain information |
|---|
Probab=93.28 E-value=2.1 Score=39.36 Aligned_cols=151 Identities=17% Similarity=0.118 Sum_probs=82.5
Q ss_pred EEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeC---CCcEEEEEccC----CcEEEEEecccccccEEEEEECC
Q psy12614 93 VNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTE---QGHINLFQISD----EGLLYEKLLDRQQGRILCTAWHS 165 (708)
Q Consensus 93 i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~---d~~i~iwd~~~----~~~~~~~~~~~~~~~v~~~~~s~ 165 (708)
-.+||+.+++....-......+.+-++-+||++|.+|+. ...+++++..+ .........-....+-.+..--|
T Consensus 48 s~~yD~~tn~~rpl~v~td~FCSgg~~L~dG~ll~tGG~~~G~~~ir~~~p~~~~~~~~w~e~~~~m~~~RWYpT~~~L~ 127 (243)
T PF07250_consen 48 SVEYDPNTNTFRPLTVQTDTFCSGGAFLPDGRLLQTGGDNDGNKAIRIFTPCTSDGTCDWTESPNDMQSGRWYPTATTLP 127 (243)
T ss_pred EEEEecCCCcEEeccCCCCCcccCcCCCCCCCEEEeCCCCccccceEEEecCCCCCCCCceECcccccCCCccccceECC
Confidence 468999887643322223334444567899999999875 24578888654 22211011112234555666678
Q ss_pred CCCEEEEecCC--eEEEEEcCC-CceEEEEEecc--cCCCCCceeEEEEEEccCCEEEEEcCCCcEEEEeCCCCeeEEEe
Q psy12614 166 SGDYLVTGCAA--AVRVWDIHK-GHAIHKMSLDK--SSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDV 240 (708)
Q Consensus 166 d~~~l~~~~~d--~i~iwd~~~-~~~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~ 240 (708)
||+.|+.|+.. +..+|.-.. ......+.... ... .....---+...|||+++..+..+ -.+||..+++.++.+
T Consensus 128 DG~vlIvGG~~~~t~E~~P~~~~~~~~~~~~~l~~~~~~-~~~nlYP~~~llPdG~lFi~an~~-s~i~d~~~n~v~~~l 205 (243)
T PF07250_consen 128 DGRVLIVGGSNNPTYEFWPPKGPGPGPVTLPFLSQTSDT-LPNNLYPFVHLLPDGNLFIFANRG-SIIYDYKTNTVVRTL 205 (243)
T ss_pred CCCEEEEeCcCCCcccccCCccCCCCceeeecchhhhcc-CccccCceEEEcCCCCEEEEEcCC-cEEEeCCCCeEEeeC
Confidence 99999998887 677776532 12121211110 000 001222245567899844444333 456788888777776
Q ss_pred ecccc
Q psy12614 241 KTHKK 245 (708)
Q Consensus 241 ~~~~~ 245 (708)
..-.+
T Consensus 206 P~lPg 210 (243)
T PF07250_consen 206 PDLPG 210 (243)
T ss_pred CCCCC
Confidence 54333
|
Glyoxal oxidase catalyses the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium []. |
| >PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin | Back alignment and domain information |
|---|
Probab=93.26 E-value=0.62 Score=42.46 Aligned_cols=67 Identities=13% Similarity=0.244 Sum_probs=50.7
Q ss_pred ECCCCcEEEEEecCCeEEEEECCceeeecC----------------CCCCCceEEEEcCCCCEEEEEecCCcEEEEEcCC
Q psy12614 507 MSECKQYIVCADRKSHVVIWKNGQHHASLP----------------RYRKPSTAMAIHPTLSTLVTVYSDHRIVEFDLNR 570 (708)
Q Consensus 507 ~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~----------------~~~~~v~~l~~s~d~~~l~~~~~dg~i~vwd~~~ 570 (708)
+..++.+|++.+.+|.+++||+.+..+.++ .....|..+.++.+|.-|++- .+|..+.|+.+-
T Consensus 18 l~~~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~PiV~l-sng~~y~y~~~L 96 (219)
T PF07569_consen 18 LECNGSYLLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNGVPIVTL-SNGDSYSYSPDL 96 (219)
T ss_pred EEeCCCEEEEEeCCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEcCCCCEEEEE-eCCCEEEecccc
Confidence 445889999999999999999996554332 255678889999888776654 468899998876
Q ss_pred CCCC
Q psy12614 571 KAFT 574 (708)
Q Consensus 571 ~~~~ 574 (708)
+...
T Consensus 97 ~~W~ 100 (219)
T PF07569_consen 97 GCWI 100 (219)
T ss_pred ceeE
Confidence 6533
|
These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus |
| >PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes [] | Back alignment and domain information |
|---|
Probab=93.23 E-value=2.3 Score=45.47 Aligned_cols=114 Identities=7% Similarity=0.076 Sum_probs=75.0
Q ss_pred ceEEEEECC--CCcEEEEEecCCeEEEEECCce------e--------------e-ecCCCCCCceEEEEc--CCCCEEE
Q psy12614 501 VISLVQMSE--CKQYIVCADRKSHVVIWKNGQH------H--------------A-SLPRYRKPSTAMAIH--PTLSTLV 555 (708)
Q Consensus 501 ~i~~~~~s~--~~~~l~~~~~d~~i~iw~~~~~------~--------------~-~~~~~~~~v~~l~~s--~d~~~l~ 555 (708)
.|+.+.... +...|+++.+||.|.+|.++.. . . -...-....+.++++ ...++||
T Consensus 102 tIN~i~v~~lg~~EVLl~c~DdG~V~~Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~f~~~v~~SaWGLdIh~~~~~rlIA 181 (717)
T PF08728_consen 102 TINFIKVGDLGGEEVLLLCTDDGDVLAYYTETIIEAIERFSEDNDSGFSRLKIKPFFHLRVGASAWGLDIHDYKKSRLIA 181 (717)
T ss_pred eeeEEEecccCCeeEEEEEecCCeEEEEEHHHHHHHHHhhccccccccccccCCCCeEeecCCceeEEEEEecCcceEEE
Confidence 455554433 5568888889999999988611 0 0 001123477889998 7788888
Q ss_pred EEecCCcEEEEEcCCCCCCchhhhhhccCchhhhcCCCCeeEEEeCCCC---C---ceEEEEcCeeEEEEecC
Q psy12614 556 TVYSDHRIVEFDLNRKAFTTFSRKLETNHPNEWLSRQLPVLGIEFDPQD---S---SLIYLMDDSALCVINKN 622 (708)
Q Consensus 556 ~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~~---~---~l~~~~~d~~i~~wd~~ 622 (708)
+++....|.||-+...... .....-..|..-|.+|+|-++. . .|+.++-.|.+.+|++.
T Consensus 182 VSsNs~~VTVFaf~l~~~r--------~~~~~s~~~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G~v~~~~I~ 246 (717)
T PF08728_consen 182 VSSNSQEVTVFAFALVDER--------FYHVPSHQHSHNIPNVSFLDDDLDPNGHVKVVATDISGEVWTFKIK 246 (717)
T ss_pred EecCCceEEEEEEeccccc--------cccccccccccCCCeeEeecCCCCCccceEEEEEeccCcEEEEEEE
Confidence 8888888888876653211 0001111256689999997754 2 67778889999998883
|
RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance []. |
| >PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus | Back alignment and domain information |
|---|
Probab=93.01 E-value=2 Score=43.13 Aligned_cols=87 Identities=11% Similarity=0.075 Sum_probs=62.5
Q ss_pred eeccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe---CC--------------
Q psy12614 20 KFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF---ND-------------- 82 (708)
Q Consensus 20 ~~~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~---~~-------------- 82 (708)
..+......+.+++.+|++++.|+...-|.|.++|+.++..++ .++|.. +..+.-+.-. .+
T Consensus 301 ~~l~D~~R~~~~i~~sP~~~laA~tDslGRV~LiD~~~~~vvr-mWKGYR-dAqc~wi~~~~~~~~~~~~~~~~~~~~~~ 378 (415)
T PF14655_consen 301 FGLPDSKREGESICLSPSGRLAAVTDSLGRVLLIDVARGIVVR-MWKGYR-DAQCGWIEVPEEGDRDRSNSNSPKSSSRF 378 (415)
T ss_pred EeeccCCceEEEEEECCCCCEEEEEcCCCcEEEEECCCChhhh-hhccCc-cceEEEEEeecccccccccccccCCCCcc
Confidence 3466777889999999999998888778999999999988776 777766 2322222222 11
Q ss_pred ---EEEEEcCCCcEEEEECCCCeEeEEEe
Q psy12614 83 ---RLFSGGLQGFVNEYDMRRLNIKSSTA 108 (708)
Q Consensus 83 ---~l~s~~~d~~i~vwd~~~~~~~~~~~ 108 (708)
.++-+-.-|.|.||.++.|..+..+.
T Consensus 379 ~l~LvIyaprRg~lEvW~~~~g~Rv~a~~ 407 (415)
T PF14655_consen 379 ALFLVIYAPRRGILEVWSMRQGPRVAAFN 407 (415)
T ss_pred eEEEEEEeccCCeEEEEecCCCCEEEEEE
Confidence 22344567899999998887766554
|
|
| >KOG1916|consensus | Back alignment and domain information |
|---|
Probab=92.95 E-value=0.055 Score=57.13 Aligned_cols=165 Identities=11% Similarity=0.109 Sum_probs=96.2
Q ss_pred eeccCCCCcEEEEEEcC-CCCEEEEEeCCCcEEEEeCCC--CCeEE----EEEecCCCCCcEEEEEEe-----CCEEEEE
Q psy12614 20 KFYAPEPKVINCIACEP-KSSRLAVSRADQSIEIWDISE--TPHVD----RVFIGDPLSNSIECLTWF-----NDRLFSG 87 (708)
Q Consensus 20 ~~~~~h~~~v~~~~~s~-~~~~la~~~~dg~v~iwd~~~--~~~~~----~~~~~h~~~~~v~~l~~~-----~~~l~s~ 87 (708)
.+.++.++.|-.+.|-. +-..++ ..-|...|||++- |+.+. +..... +..+.-+.|. .-++..+
T Consensus 126 ~l~kgf~G~v~dl~fah~~~pk~~--~~vg~lfVy~vd~l~G~iq~~l~v~~~~p~--gs~~~~V~wcp~~~~~~~ic~~ 201 (1283)
T KOG1916|consen 126 ELAKGFPGGVGDLQFAHTKCPKGR--RLVGELFVYDVDVLQGEIQPQLEVTPITPY--GSDPQLVSWCPIAVNKVYICYG 201 (1283)
T ss_pred HHHhcCCCCcccccccccCChHHH--HHhhhhheeehHhhccccccceEEeecCcC--CCCcceeeecccccccceeeec
Confidence 35678889999998843 222222 3346788998863 44322 122222 3556667776 4445555
Q ss_pred cCCCcEEEEECCCCeEeEEEeecCCceEEEE-----------EecCCCEEEEEeCCCcEEEEEcc-CCcEEE--EEeccc
Q psy12614 88 GLQGFVNEYDMRRLNIKSSTAVTSGTCWCLS-----------VHKKKRLLAAGTEQGHINLFQIS-DEGLLY--EKLLDR 153 (708)
Q Consensus 88 ~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~-----------~s~~~~~la~~~~d~~i~iwd~~-~~~~~~--~~~~~~ 153 (708)
-.+++|++.++.+... ..+.+|+..+..++ .||||+.+|.++.||.++.|.+. +|+... ....+.
T Consensus 202 ~~~~~i~lL~~~ra~~-~l~rsHs~~~~d~a~~~~g~~~l~~lSpDGtv~a~a~~dG~v~f~Qiyi~g~~~~rclhewkp 280 (1283)
T KOG1916|consen 202 LKGGEIRLLNINRALR-SLFRSHSQRVTDMAFFAEGVLKLASLSPDGTVFAWAISDGSVGFYQIYITGKIVHRCLHEWKP 280 (1283)
T ss_pred cCCCceeEeeechHHH-HHHHhcCCCcccHHHHhhchhhheeeCCCCcEEEEeecCCccceeeeeeeccccHhhhhccCC
Confidence 6788888877766432 33445776666554 58999999999999999998865 333221 123444
Q ss_pred cc-ccEEEEEECCCC---------CEEEEecC-C-eEEEEEcCCCceE
Q psy12614 154 QQ-GRILCTAWHSSG---------DYLVTGCA-A-AVRVWDIHKGHAI 189 (708)
Q Consensus 154 ~~-~~v~~~~~s~d~---------~~l~~~~~-d-~i~iwd~~~~~~~ 189 (708)
|. ++-.|.-|.... .++++++. + .+++|.-...+++
T Consensus 281 hd~~p~vC~lc~~~~~~~v~i~~w~~~Itttd~nre~k~w~~a~w~Cl 328 (1283)
T KOG1916|consen 281 HDKHPRVCWLCHKQEILVVSIGKWVLRITTTDVNREEKFWAEAPWQCL 328 (1283)
T ss_pred CCCCCceeeeeccccccCCccceeEEEEecccCCcceeEeeccchhhh
Confidence 54 232333343322 12333333 3 7888876655555
|
|
| >PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins | Back alignment and domain information |
|---|
Probab=92.92 E-value=0.39 Score=29.83 Aligned_cols=31 Identities=23% Similarity=0.438 Sum_probs=26.2
Q ss_pred CceEEEEEecCC---CEEEEEeCCCcEEEEEccC
Q psy12614 112 GTCWCLSVHKKK---RLLAAGTEQGHINLFQISD 142 (708)
Q Consensus 112 ~~v~~~~~s~~~---~~la~~~~d~~i~iwd~~~ 142 (708)
+.|.++.|||+. .+|+.+-..|.|.++|+++
T Consensus 1 GAvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~ 34 (43)
T PF10313_consen 1 GAVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRS 34 (43)
T ss_pred CCeEEEEeCCCCCcccEEEEEccCCeEEEEEccc
Confidence 468999999854 4888888889999999985
|
It contains a characteristic DLL sequence motif. |
| >PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin | Back alignment and domain information |
|---|
Probab=92.67 E-value=1 Score=41.15 Aligned_cols=74 Identities=8% Similarity=0.051 Sum_probs=55.4
Q ss_pred CcEEEEEEeCCEEEEEcCCCcEEEEECCCCeEeEEE-------e-------ecCCceEEEEEecCCCEEEEEeCCCcEEE
Q psy12614 72 NSIECLTWFNDRLFSGGLQGFVNEYDMRRLNIKSST-------A-------VTSGTCWCLSVHKKKRLLAAGTEQGHINL 137 (708)
Q Consensus 72 ~~v~~l~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~-------~-------~~~~~v~~~~~s~~~~~la~~~~d~~i~i 137 (708)
.++..+...+++|++.+.+|.+++||+.+++.+..- . .....|..+.++.+|.-+++- .+|..+.
T Consensus 13 s~~~~l~~~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~PiV~l-sng~~y~ 91 (219)
T PF07569_consen 13 SPVSFLECNGSYLLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNGVPIVTL-SNGDSYS 91 (219)
T ss_pred CceEEEEeCCCEEEEEeCCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEcCCCCEEEEE-eCCCEEE
Confidence 456666666999999999999999999998864432 1 245678888888888776664 4577888
Q ss_pred EEccCCcEE
Q psy12614 138 FQISDEGLL 146 (708)
Q Consensus 138 wd~~~~~~~ 146 (708)
|+.+-+..+
T Consensus 92 y~~~L~~W~ 100 (219)
T PF07569_consen 92 YSPDLGCWI 100 (219)
T ss_pred eccccceeE
Confidence 887766554
|
These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus |
| >PF14727 PHTB1_N: PTHB1 N-terminus | Back alignment and domain information |
|---|
Probab=92.53 E-value=13 Score=37.61 Aligned_cols=147 Identities=12% Similarity=0.135 Sum_probs=90.2
Q ss_pred EEEEEcCCCcEEEEeCCCCe-----eEEEeeccccCeEEEEEeC-----CCCEEEEEecCCeEEEEEccCCcccccCCCC
Q psy12614 216 TIITGDSGGFVRFWDGKTGV-----QWSDVKTHKKDILALTVSE-----DENYLYCAGVDPTVVCFQRTRKPQVCSTSGP 285 (708)
Q Consensus 216 ~l~~~~~dg~i~~wd~~~~~-----~~~~~~~~~~~i~~~~~s~-----~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~ 285 (708)
++++|+..|.++||+...+. .+-..+ -..+|..+..-+ +...||+ -.-+.+.+|.+.... |.
T Consensus 39 ~IivGS~~G~LrIy~P~~~~~~~~~lllE~~-l~~PILqv~~G~F~s~~~~~~LaV-LhP~kl~vY~v~~~~------g~ 110 (418)
T PF14727_consen 39 KIIVGSYSGILRIYDPSGNEFQPEDLLLETQ-LKDPILQVECGKFVSGSEDLQLAV-LHPRKLSVYSVSLVD------GT 110 (418)
T ss_pred EEEEeccccEEEEEccCCCCCCCccEEEEEe-cCCcEEEEEeccccCCCCcceEEE-ecCCEEEEEEEEecC------CC
Confidence 59999999999999985543 122222 356777776532 2345554 446788899884400 11
Q ss_pred CCCCcceEEeEEEeccccce--EEEEEe-------CCEEEEEcCCCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEE
Q psy12614 286 EQGSSVWVRSVNRVIHEGDV--KSLALH-------GNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHV 356 (708)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~v--~~l~~~-------~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l 356 (708)
......+ .+.....|.-.- ..++.- .+.+..-+.||.+.+++-+.............+.++.+.+.-..+
T Consensus 111 ~~~g~~~-~L~~~yeh~l~~~a~nm~~G~Fgg~~~~~~IcVQS~DG~L~~feqe~~~f~~~lp~~llPgPl~Y~~~tDsf 189 (418)
T PF14727_consen 111 VEHGNQY-QLELIYEHSLQRTAYNMCCGPFGGVKGRDFICVQSMDGSLSFFEQESFAFSRFLPDFLLPGPLCYCPRTDSF 189 (418)
T ss_pred cccCcEE-EEEEEEEEecccceeEEEEEECCCCCCceEEEEEecCceEEEEeCCcEEEEEEcCCCCCCcCeEEeecCCEE
Confidence 0001112 233333443322 223322 267888999999999999888755555356677788888887777
Q ss_pred EEE-cCCeEEEEEecC
Q psy12614 357 LLQ-YTSHLELWSLGS 371 (708)
Q Consensus 357 ~~~-~~~~i~i~~~~~ 371 (708)
++. .+..+.-|....
T Consensus 190 vt~sss~~l~~Yky~~ 205 (418)
T PF14727_consen 190 VTASSSWTLECYKYQD 205 (418)
T ss_pred EEecCceeEEEecHHH
Confidence 775 556788777653
|
|
| >PF11725 AvrE: Pathogenicity factor; InterPro: IPR021085 This family is secreted by Gram-negative Gammaproteobacteria such as Pseudomonas syringae of tomato and Erwinia amylovora (Fire blight bacteria), amongst others | Back alignment and domain information |
|---|
Probab=92.01 E-value=31 Score=40.76 Aligned_cols=148 Identities=11% Similarity=0.100 Sum_probs=92.6
Q ss_pred ecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCCeEEEEEcCCCce
Q psy12614 109 VTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAAAVRVWDIHKGHA 188 (708)
Q Consensus 109 ~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~i~iwd~~~~~~ 188 (708)
.|...++.+.-+++|.++=. .|+.++.||.....+. ..-......+..+.-.-||+..+ =+.+. +-|+..+..
T Consensus 360 aH~A~LTgv~~~~~ge~lRl--Hd~~LY~~d~~~~~Wk--~~~~~~d~~~S~Ls~qgdG~lYA-k~~~~--l~nLSs~~~ 432 (1774)
T PF11725_consen 360 AHIAHLTGVHTDPDGEQLRL--HDDRLYQFDPNTARWK--PPPDKSDTPFSSLSRQGDGKLYA-KDDDT--LVNLSSGQM 432 (1774)
T ss_pred HHHHHhhccccCCCCCeEEe--ecCceeeeccccceec--CCCCcccchhhhhcccCCCceEe-cCCCc--eeecCCCCc
Confidence 46667778888888887754 5788999998877653 11222234566666666776554 22222 224443332
Q ss_pred EEEEEecccCCCCCceeEEEEEEccCCE--EEEEcCCCcEEEEeCCCC------e--eEEEeeccccCeEEEEEeCCCCE
Q psy12614 189 IHKMSLDKSSKFSKNTAVWCVAFCADFT--IITGDSGGFVRFWDGKTG------V--QWSDVKTHKKDILALTVSEDENY 258 (708)
Q Consensus 189 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~--l~~~~~dg~i~~wd~~~~------~--~~~~~~~~~~~i~~~~~s~~~~~ 258 (708)
-... -..+.+...+++|+ ++++.....+.+|++... + ....+.+-.....++.++++ .
T Consensus 433 ~~~~----------v~~l~sfSv~~~g~vA~L~~~d~q~~qL~~m~~~~a~~~p~~~~~L~L~dG~a~A~~VgLs~d--r 500 (1774)
T PF11725_consen 433 SEAE----------VDKLKSFSVAPDGTVAMLTGKDGQTLQLHDMSPVDAPPTPRKTKTLQLADGKAQAQSVGLSND--R 500 (1774)
T ss_pred chhh----------hhhcccccccCCCceeeeecCCCcceeeeccCccccccCccceeeeeccCCchhhhheeecCC--e
Confidence 2111 34567777888997 556666667799988653 1 11223333446777888877 6
Q ss_pred EEEEecCCeEEEEEccC
Q psy12614 259 LYCAGVDPTVVCFQRTR 275 (708)
Q Consensus 259 l~~~~~dg~i~iw~~~~ 275 (708)
|++++.+|.++.=++..
T Consensus 501 LFvADseGkLYsa~l~~ 517 (1774)
T PF11725_consen 501 LFVADSEGKLYSADLPA 517 (1774)
T ss_pred EEEEeCCCCEEeccccc
Confidence 89999999998888765
|
It is an essential pathogenicity factor of approximately 198 kDa. Its injection into the host-plant is dependent upon the bacterial type III or Hrp secretion system []. The family is long and carries a number of predicted functional regions, including an ERMS or endoplasmic reticulum membrane retention signal at both the C- and the N-termini, a leucine-zipper motif from residues 539-560, and a nuclear localisation signal at 1358-1361. This conserved AvrE-family of effectors is among the few that are required for full virulence of many phytopathogenic pseudomonads, erwinias and pantoeas []. |
| >PF13449 Phytase-like: Esterase-like activity of phytase | Back alignment and domain information |
|---|
Probab=91.97 E-value=14 Score=36.51 Aligned_cols=162 Identities=15% Similarity=0.087 Sum_probs=91.3
Q ss_pred Cccceeeeeeeecc-CCCCcEEEEEEcCCCCEEEEEeCCCc------EEEEeCCC--CC--eEE----EEEecCC---C-
Q psy12614 10 TMGTYGVHNIKFYA-PEPKVINCIACEPKSSRLAVSRADQS------IEIWDISE--TP--HVD----RVFIGDP---L- 70 (708)
Q Consensus 10 ~~~~~~~~~~~~~~-~h~~~v~~~~~s~~~~~la~~~~dg~------v~iwd~~~--~~--~~~----~~~~~h~---~- 70 (708)
++..+.+.....+. ..-+.++.+.+.|++..+++-+.+|. +...++.. +. .+. ..+.... +
T Consensus 2 ~lg~~~~~~~~~~~~~~~GGlSgl~~~~~~~~~~avSD~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~G~~~~ 81 (326)
T PF13449_consen 2 YLGEYTLPSGWEFDGIPFGGLSGLDYDPDDGRFYAVSDRGPNKGPPRFYTFRIDYDQGGIGGVTILDMIPLRDPDGQPFP 81 (326)
T ss_pred ccCcEeeccCcccCCCccCcEeeEEEeCCCCEEEEEECCCCCCCCCcEEEEEeeccCCCccceEeccceeccCCCCCcCC
Confidence 34455555443333 34588999999965555555566777 55555543 10 000 0111111 0
Q ss_pred --CCcEEEEEEe--CCEEEEEcCC------CcEEEEECCCCeEeEEEe---------------ecCCceEEEEEecCCCE
Q psy12614 71 --SNSIECLTWF--NDRLFSGGLQ------GFVNEYDMRRLNIKSSTA---------------VTSGTCWCLSVHKKKRL 125 (708)
Q Consensus 71 --~~~v~~l~~~--~~~l~s~~~d------~~i~vwd~~~~~~~~~~~---------------~~~~~v~~~~~s~~~~~ 125 (708)
.....+|++. +.++++.-.+ ..|..++.. |+....+. ..+...-+|+++|||+.
T Consensus 82 ~~~~D~Egi~~~~~g~~~is~E~~~~~~~~p~I~~~~~~-G~~~~~~~vP~~~~~~~~~~~~~~~N~G~E~la~~~dG~~ 160 (326)
T PF13449_consen 82 KNGLDPEGIAVPPDGSFWISSEGGRTGGIPPRIRRFDLD-GRVIRRFPVPAAFLPDANGTSGRRNNRGFEGLAVSPDGRT 160 (326)
T ss_pred cCCCChhHeEEecCCCEEEEeCCccCCCCCCEEEEECCC-CcccceEccccccccccCccccccCCCCeEEEEECCCCCE
Confidence 0145578885 6777776667 789889877 65544431 13456789999999996
Q ss_pred EEEEeC-----CC--c-------EEEEE--ccC-CcE--EEEEeccc-----ccccEEEEEECCCCCEEEE
Q psy12614 126 LAAGTE-----QG--H-------INLFQ--ISD-EGL--LYEKLLDR-----QQGRILCTAWHSSGDYLVT 172 (708)
Q Consensus 126 la~~~~-----d~--~-------i~iwd--~~~-~~~--~~~~~~~~-----~~~~v~~~~~s~d~~~l~~ 172 (708)
|.++.+ |+ . ++++. ..+ ++. .+...+.. ....+..+.+-+++++|+.
T Consensus 161 l~~~~E~~l~~d~~~~~~~~~~~~ri~~~d~~~~~~~~~~~~y~ld~~~~~~~~~~isd~~al~d~~lLvL 231 (326)
T PF13449_consen 161 LFAAMESPLKQDGPRANPDNGSPLRILRYDPKTPGEPVAEYAYPLDPPPTAPGDNGISDIAALPDGRLLVL 231 (326)
T ss_pred EEEEECccccCCCcccccccCceEEEEEecCCCCCccceEEEEeCCccccccCCCCceeEEEECCCcEEEE
Confidence 666543 22 1 45544 443 211 11123332 3567888888888886653
|
|
| >COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=91.84 E-value=4.9 Score=40.34 Aligned_cols=139 Identities=14% Similarity=0.124 Sum_probs=83.7
Q ss_pred CCCEEEE-EeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe----------CCEEEEEcCCCcEEEEECC-CCeEe
Q psy12614 37 KSSRLAV-SRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF----------NDRLFSGGLQGFVNEYDMR-RLNIK 104 (708)
Q Consensus 37 ~~~~la~-~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~----------~~~l~s~~~d~~i~vwd~~-~~~~~ 104 (708)
|..+|.. |..-..+.-.|+..|+.+. ...-|. . | -+.|. .+.|+-.+..+..+ -|.. .|..+
T Consensus 478 dssli~~dg~~~~kLykmDIErGkvve-eW~~~d--d-v-vVqy~p~~kf~qmt~eqtlvGlS~~svFr-IDPR~~gNKi 551 (776)
T COG5167 478 DSSLIYLDGGERDKLYKMDIERGKVVE-EWDLKD--D-V-VVQYNPYFKFQQMTDEQTLVGLSDYSVFR-IDPRARGNKI 551 (776)
T ss_pred CcceEEecCCCcccceeeecccceeee-EeecCC--c-c-eeecCCchhHHhcCccceEEeecccceEE-ecccccCCce
Confidence 4444433 4445567777778888776 555554 2 2 34444 23444444443333 3432 23222
Q ss_pred EEEeecCCceEEEEEe----cCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCCeEEE
Q psy12614 105 SSTAVTSGTCWCLSVH----KKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAAAVRV 180 (708)
Q Consensus 105 ~~~~~~~~~v~~~~~s----~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~i~i 180 (708)
.... ...-++--.|| ....++|+++..|.|++||--.-... ..+++....|..+..+.+|+++++.|...+.+
T Consensus 552 ~v~e-sKdY~tKn~Fss~~tTesGyIa~as~kGDirLyDRig~rAK--talP~lG~aIk~idvta~Gk~ilaTCk~yllL 628 (776)
T COG5167 552 KVVE-SKDYKTKNKFSSGMTTESGYIAAASRKGDIRLYDRIGKRAK--TALPGLGDAIKHIDVTANGKHILATCKNYLLL 628 (776)
T ss_pred eeee-ehhccccccccccccccCceEEEecCCCceeeehhhcchhh--hcCcccccceeeeEeecCCcEEEEeecceEEE
Confidence 1111 11112222222 23458999999999999997655443 56777788999999999999999999888877
Q ss_pred EEcC
Q psy12614 181 WDIH 184 (708)
Q Consensus 181 wd~~ 184 (708)
-|+.
T Consensus 629 ~d~~ 632 (776)
T COG5167 629 TDVP 632 (776)
T ss_pred Eecc
Confidence 7764
|
|
| >KOG1916|consensus | Back alignment and domain information |
|---|
Probab=91.65 E-value=0.25 Score=52.53 Aligned_cols=107 Identities=16% Similarity=0.155 Sum_probs=68.4
Q ss_pred EEEecCCCeEEE----EEecCCCCCccCcceEEEEECC---CCcEEEEEecCCeEEEEECCceee-ecCCCCCCceEEE-
Q psy12614 476 LYIIDLSSLEIK----YCVDPYKSNLMSDVISLVQMSE---CKQYIVCADRKSHVVIWKNGQHHA-SLPRYRKPSTAMA- 546 (708)
Q Consensus 476 i~~~~~~~~~~~----~~~~~~~~~~~~~~i~~~~~s~---~~~~l~~~~~d~~i~iw~~~~~~~-~~~~~~~~v~~l~- 546 (708)
||+++.-.++.. .......|. .+.-+.|.| +.-++..+..++.|++.+..+... .+.+|...++.++
T Consensus 157 Vy~vd~l~G~iq~~l~v~~~~p~gs----~~~~V~wcp~~~~~~~ic~~~~~~~i~lL~~~ra~~~l~rsHs~~~~d~a~ 232 (1283)
T KOG1916|consen 157 VYDVDVLQGEIQPQLEVTPITPYGS----DPQLVSWCPIAVNKVYICYGLKGGEIRLLNINRALRSLFRSHSQRVTDMAF 232 (1283)
T ss_pred eeehHhhccccccceEEeecCcCCC----CcceeeecccccccceeeeccCCCceeEeeechHHHHHHHhcCCCcccHHH
Confidence 888876443332 222223332 334455554 667888888899999988884433 5556877776655
Q ss_pred ----------EcCCCCEEEEEecCCcEEEEEcC-CCCCCchhhhhhccCchhhhcCCC
Q psy12614 547 ----------IHPTLSTLVTVYSDHRIVEFDLN-RKAFTTFSRKLETNHPNEWLSRQL 593 (708)
Q Consensus 547 ----------~s~d~~~l~~~~~dg~i~vwd~~-~~~~~~~~~~~~~~~~~~~~~~~~ 593 (708)
.||||+.+|.++.||.++.|.+- +|+.. ......|..|++
T Consensus 233 ~~~g~~~l~~lSpDGtv~a~a~~dG~v~f~Qiyi~g~~~-------~rclhewkphd~ 283 (1283)
T KOG1916|consen 233 FAEGVLKLASLSPDGTVFAWAISDGSVGFYQIYITGKIV-------HRCLHEWKPHDK 283 (1283)
T ss_pred HhhchhhheeeCCCCcEEEEeecCCccceeeeeeecccc-------HhhhhccCCCCC
Confidence 48899999999999998888764 33322 123346667764
|
|
| >KOG3616|consensus | Back alignment and domain information |
|---|
Probab=91.34 E-value=2.5 Score=44.25 Aligned_cols=74 Identities=9% Similarity=0.103 Sum_probs=51.0
Q ss_pred ecCCCCCCceEEEEcCCCCEEEEEecCCcEEEEEcCCCCCCchhhhhhccCchhhhcCCCCeeEEEeCCCCCceEEEEcC
Q psy12614 534 SLPRYRKPSTAMAIHPTLSTLVTVYSDHRIVEFDLNRKAFTTFSRKLETNHPNEWLSRQLPVLGIEFDPQDSSLIYLMDD 613 (708)
Q Consensus 534 ~~~~~~~~v~~l~~s~d~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~~~~l~~~~~d 613 (708)
.+..|.+.|-.+..+..+..|+.-...-.+.++|+++.+.. .+.. -...+.|-|....|+.-+.
T Consensus 332 ~~inh~~~vdwielne~~~kllfrdkk~kl~l~di~s~qks------------miln---fcsymqwvp~sdvivaqn~- 395 (1636)
T KOG3616|consen 332 GFINHEGAVDWIELNERAHKLLFRDKKLKLHLVDIESCQKS------------MILN---FCSYMQWVPGSDVIVAQNG- 395 (1636)
T ss_pred ccccccccccceeccchhhhhhcccccceeEEEEcccchHH------------HHHH---HhhhheeccCcceEEecCC-
Confidence 45568888988988888887877777778999999987643 1111 2445789997776555544
Q ss_pred eeEEEE-ecCC
Q psy12614 614 SALCVI-NKNK 623 (708)
Q Consensus 614 ~~i~~w-d~~~ 623 (708)
..+++| +++.
T Consensus 396 dnl~iwyn~d~ 406 (1636)
T KOG3616|consen 396 DNLCIWYNIDA 406 (1636)
T ss_pred CceEEEecCCc
Confidence 458888 4443
|
|
| >TIGR03032 conserved hypothetical protein TIGR03032 | Back alignment and domain information |
|---|
Probab=90.98 E-value=15 Score=35.03 Aligned_cols=109 Identities=11% Similarity=0.058 Sum_probs=74.6
Q ss_pred EEEeCCCCCeEEEEEecCCCCCcEEEEEEe-CCEEEEEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEE
Q psy12614 51 EIWDISETPHVDRVFIGDPLSNSIECLTWF-NDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAG 129 (708)
Q Consensus 51 ~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~-~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~ 129 (708)
.++|+.+++.+ ..|.. -..+-.|. |+..++=+..|.|..+|.++|+...... -.+....++|. |.+++++
T Consensus 188 ~vidv~s~evl---~~GLs---mPhSPRWhdgrLwvldsgtGev~~vD~~~G~~e~Va~-vpG~~rGL~f~--G~llvVg 258 (335)
T TIGR03032 188 CVIDIPSGEVV---ASGLS---MPHSPRWYQGKLWLLNSGRGELGYVDPQAGKFQPVAF-LPGFTRGLAFA--GDFAFVG 258 (335)
T ss_pred EEEEeCCCCEE---EcCcc---CCcCCcEeCCeEEEEECCCCEEEEEcCCCCcEEEEEE-CCCCCccccee--CCEEEEE
Confidence 34788888764 33332 34556788 7777788889999999998876544332 23567788887 7777665
Q ss_pred eC----C----------------CcEEEEEccCCcEEEEEecccccccEEEEEECCCCC
Q psy12614 130 TE----Q----------------GHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGD 168 (708)
Q Consensus 130 ~~----d----------------~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~ 168 (708)
-. + .-|.+.|+.+|..+.-..+.+--..+.+++.-|.-+
T Consensus 259 mSk~R~~~~f~glpl~~~l~~~~CGv~vidl~tG~vv~~l~feg~v~EifdV~vLPg~r 317 (335)
T TIGR03032 259 LSKLRESRVFGGLPIEERLDALGCGVAVIDLNSGDVVHWLRFEGVIEEIYDVAVLPGVR 317 (335)
T ss_pred eccccCCCCcCCCchhhhhhhhcccEEEEECCCCCEEEEEEeCCceeEEEEEEEecCCC
Confidence 32 1 237788888888776666666667788888777643
|
This protein family is uncharacterized. A number of motifs are conserved perfectly among all member sequences. The function of this protein is unknown. |
| >PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs | Back alignment and domain information |
|---|
Probab=90.93 E-value=4.1 Score=44.52 Aligned_cols=84 Identities=20% Similarity=0.274 Sum_probs=55.9
Q ss_pred CCCceEEEEcCCCCEEEEEecCCcEEEEEcCCC----------CCCchhhhhhccCchhh--hcCCCCeeEEEeCCC---
Q psy12614 539 RKPSTAMAIHPTLSTLVTVYSDHRIVEFDLNRK----------AFTTFSRKLETNHPNEW--LSRQLPVLGIEFDPQ--- 603 (708)
Q Consensus 539 ~~~v~~l~~s~d~~~l~~~~~dg~i~vwd~~~~----------~~~~~~~~~~~~~~~~~--~~~~~~i~~l~~s~~--- 603 (708)
.-.|..+.++|+|++||..+..| |.|-.+... +...-++.. .+-..+ ..+...|..+.|.|.
T Consensus 84 ~f~v~~i~~n~~g~~lal~G~~~-v~V~~LP~r~g~~~~~~~g~~~i~Crt~--~v~~~~~~~~~~~~i~qv~WhP~s~~ 160 (717)
T PF10168_consen 84 LFEVHQISLNPTGSLLALVGPRG-VVVLELPRRWGKNGEFEDGKKEINCRTV--PVDERFFTSNSSLEIKQVRWHPWSES 160 (717)
T ss_pred ceeEEEEEECCCCCEEEEEcCCc-EEEEEeccccCccccccCCCcceeEEEE--EechhhccCCCCceEEEEEEcCCCCC
Confidence 35788999999999999888866 666555421 111011000 011111 234568999999986
Q ss_pred CCceEEEEcCeeEEEEecCCCC
Q psy12614 604 DSSLIYLMDDSALCVINKNKSL 625 (708)
Q Consensus 604 ~~~l~~~~~d~~i~~wd~~~~~ 625 (708)
+..|++..+|+++++||+..+.
T Consensus 161 ~~~l~vLtsdn~lR~y~~~~~~ 182 (717)
T PF10168_consen 161 DSHLVVLTSDNTLRLYDISDPQ 182 (717)
T ss_pred CCeEEEEecCCEEEEEecCCCC
Confidence 5789999999999999997543
|
It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells []. |
| >KOG1900|consensus | Back alignment and domain information |
|---|
Probab=90.85 E-value=3.8 Score=46.29 Aligned_cols=153 Identities=14% Similarity=0.148 Sum_probs=93.4
Q ss_pred EEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEE--------CCCCCEEEEecCC-eEEEEEcCC
Q psy12614 115 WCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAW--------HSSGDYLVTGCAA-AVRVWDIHK 185 (708)
Q Consensus 115 ~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~--------s~d~~~l~~~~~d-~i~iwd~~~ 185 (708)
..|-+-|.=++. -.+-|+.+.+|+++++.-. ..+.+....|..+.. .|.=++++....- .|.++-+.-
T Consensus 82 ~~mGiFpeI~Ra-WiTiDn~L~lWny~~~~e~--~~~d~~shtIl~V~LvkPkpgvFv~~IqhlLvvaT~~ei~ilgV~~ 158 (1311)
T KOG1900|consen 82 TDMGIFPEIGRA-WITIDNNLFLWNYESDNEL--AEYDGLSHTILKVGLVKPKPGVFVPEIQHLLVVATPVEIVILGVSF 158 (1311)
T ss_pred eeeccchhhcce-EEEeCCeEEEEEcCCCCcc--ccccchhhhheeeeeecCCCCcchhhhheeEEecccceEEEEEEEe
Confidence 344455543332 2356889999999984433 456665666666543 3333444444333 566554432
Q ss_pred Cce-------EEEEEecccCCCCCceeEEEEEEccCCEEEEEcCCCcEEE--EeCCCC---e-eE---------------
Q psy12614 186 GHA-------IHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRF--WDGKTG---V-QW--------------- 237 (708)
Q Consensus 186 ~~~-------~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~--wd~~~~---~-~~--------------- 237 (708)
.+. ...+... .....|.++....+|+++.++.||.|+- |...+| + +-
T Consensus 159 ~~~~~~~~~f~~~~~i~-----~dg~~V~~I~~t~nGRIF~~G~dg~lyEl~Yq~~~gWf~~rc~Kiclt~s~ls~lvPs 233 (1311)
T KOG1900|consen 159 DEFTGELSIFNTSFKIS-----VDGVSVNCITYTENGRIFFAGRDGNLYELVYQAEDGWFGSRCRKICLTKSVLSSLVPS 233 (1311)
T ss_pred ccccCcccccccceeee-----cCCceEEEEEeccCCcEEEeecCCCEEEEEEeccCchhhcccccccCchhHHHHhhhh
Confidence 111 1112222 1256789999899999888888886552 222221 1 10
Q ss_pred -EEee-ccccCeEEEEEeCCCCEEEEEecCCeEEEEEccC
Q psy12614 238 -SDVK-THKKDILALTVSEDENYLYCAGVDPTVVCFQRTR 275 (708)
Q Consensus 238 -~~~~-~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~ 275 (708)
-.+. .+..+|..++.....+.+++-+..|+|..|++..
T Consensus 234 ~~~~~~~~~dpI~qi~ID~SR~IlY~lsek~~v~~Y~i~~ 273 (1311)
T KOG1900|consen 234 LLSVPGSSKDPIRQITIDNSRNILYVLSEKGTVSAYDIGG 273 (1311)
T ss_pred hhcCCCCCCCcceeeEeccccceeeeeccCceEEEEEccC
Confidence 1123 4677999999998888999999999999999986
|
|
| >PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal | Back alignment and domain information |
|---|
Probab=90.55 E-value=8.3 Score=31.39 Aligned_cols=115 Identities=11% Similarity=0.100 Sum_probs=71.2
Q ss_pred EEEecCCCEEEEEeCCCcEEEEEccCCcEEE-----EEecccccccEEEEEECC-----CCCEEEEecCCeEEEEEcCCC
Q psy12614 117 LSVHKKKRLLAAGTEQGHINLFQISDEGLLY-----EKLLDRQQGRILCTAWHS-----SGDYLVTGCAAAVRVWDIHKG 186 (708)
Q Consensus 117 ~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~-----~~~~~~~~~~v~~~~~s~-----d~~~l~~~~~d~i~iwd~~~~ 186 (708)
-.|......|++++.-|.|.|.+........ ...+-.-...|++++-.+ +...|+.|+...+..||+.+.
T Consensus 4 GkfDG~~pcL~~aT~~gKV~IH~ph~~~~~~~~~~~~i~~LNin~~italaaG~l~~~~~~D~LliGt~t~llaYDV~~N 83 (136)
T PF14781_consen 4 GKFDGVHPCLACATTGGKVFIHNPHERGQRTGRQDSDISFLNINQEITALAAGRLKPDDGRDCLLIGTQTSLLAYDVENN 83 (136)
T ss_pred EEeCCCceeEEEEecCCEEEEECCCccccccccccCceeEEECCCceEEEEEEecCCCCCcCEEEEeccceEEEEEcccC
Confidence 3455556678888888999999876432110 011112244566665432 346788888889999999887
Q ss_pred ceEEEEEecccCCCCCceeEEEEEEcc----CCEEEEEcCCCcEEEEeCCCCeeEEE
Q psy12614 187 HAIHKMSLDKSSKFSKNTAVWCVAFCA----DFTIITGDSGGFVRFWDGKTGVQWSD 239 (708)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~v~~~~~~~----~~~l~~~~~dg~i~~wd~~~~~~~~~ 239 (708)
..+..... ...+.++.+-. +..++..+.+..|.-||.+..+...+
T Consensus 84 ~d~Fyke~--------~DGvn~i~~g~~~~~~~~l~ivGGncsi~Gfd~~G~e~fWt 132 (136)
T PF14781_consen 84 SDLFYKEV--------PDGVNAIVIGKLGDIPSPLVIVGGNCSIQGFDYEGNEIFWT 132 (136)
T ss_pred chhhhhhC--------ccceeEEEEEecCCCCCcEEEECceEEEEEeCCCCcEEEEE
Confidence 76654433 45566666643 22377777777888888654444433
|
|
| >PF12657 TFIIIC_delta: Transcription factor IIIC subunit delta N-term; InterPro: IPR024761 This entry represents a domain found towards the N terminus of the 90 kDa subunit of transcription factor IIIC (also known as subunit 9 in yeast []) | Back alignment and domain information |
|---|
Probab=90.10 E-value=1.5 Score=38.41 Aligned_cols=31 Identities=19% Similarity=0.191 Sum_probs=25.6
Q ss_pred CceEEEEEecCC------CEEEEEeCCCcEEEEEccC
Q psy12614 112 GTCWCLSVHKKK------RLLAAGTEQGHINLFQISD 142 (708)
Q Consensus 112 ~~v~~~~~s~~~------~~la~~~~d~~i~iwd~~~ 142 (708)
..+.+++|||-| .+||+.+.++.|.||.-..
T Consensus 86 ~~vv~~aWSP~Gl~~~~rClLavLTs~~~l~l~~~~~ 122 (173)
T PF12657_consen 86 SQVVSAAWSPSGLGPNGRCLLAVLTSNGRLSLYGPPG 122 (173)
T ss_pred ccEEEEEECCCCCCCCCceEEEEEcCCCeEEEEecCC
Confidence 479999999943 4788889999999998663
|
The whole subunit is involved in RNA polymerase III-mediated transcription. It is possible that this N-terminal domain interacts with TFIIIC subunit 8 []. |
| >KOG2247|consensus | Back alignment and domain information |
|---|
Probab=89.96 E-value=0.029 Score=54.90 Aligned_cols=146 Identities=14% Similarity=0.131 Sum_probs=99.0
Q ss_pred EEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCE-EEEEcCCCcEEEEECCCCeEeE
Q psy12614 29 INCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDR-LFSGGLQGFVNEYDMRRLNIKS 105 (708)
Q Consensus 29 v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~-l~s~~~d~~i~vwd~~~~~~~~ 105 (708)
-....|-|.+.-|++++.+..|..||-....... +.. .+....++|. ++. ++.+-..+.+.+||+.+.....
T Consensus 37 pi~~~w~~e~~nlavaca~tiv~~YD~agq~~le----~n~-tg~aldm~wDkegdvlavlAek~~piylwd~n~eytqq 111 (615)
T KOG2247|consen 37 PIIHRWRPEGHNLAVACANTIVIYYDKAGQVILE----LNP-TGKALDMAWDKEGDVLAVLAEKTGPIYLWDVNSEYTQQ 111 (615)
T ss_pred cceeeEecCCCceehhhhhhHHHhhhhhcceecc----cCC-chhHhhhhhccccchhhhhhhcCCCeeechhhhhhHHH
Confidence 3455677877779998889899999976544332 222 3566788888 554 4556678999999998743221
Q ss_pred EEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEE
Q psy12614 106 STAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWD 182 (708)
Q Consensus 106 ~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd 182 (708)
--.+-...-.-+.|++.+..++.+...|.+.|++-.+.... .....|..++.++++.+.+. .+.++.+ .+.+-.
T Consensus 112 LE~gg~~s~sll~wsKg~~el~ig~~~gn~viynhgtsR~i--iv~Gkh~RRgtq~av~lEd~-vil~dcd~~L~v~~ 186 (615)
T KOG2247|consen 112 LESGGTSSKSLLAWSKGTPELVIGNNAGNIVIYNHGTSRRI--IVMGKHQRRGTQIAVTLEDY-VILCDCDNTLSVTT 186 (615)
T ss_pred HhccCcchHHHHhhccCCccccccccccceEEEeccchhhh--hhhcccccceeEEEecccce-eeecCcHHHHHHhh
Confidence 11111111112788999999999989999999998877664 34444889999999999875 4445544 554433
|
|
| >COG5290 IkappaB kinase complex, IKAP component [Transcription] | Back alignment and domain information |
|---|
Probab=89.95 E-value=17 Score=38.93 Aligned_cols=90 Identities=10% Similarity=0.080 Sum_probs=54.2
Q ss_pred EEEecCCCeEEEEecCCc-----EEEecCCCeEEEEEecCCCCCccCcceEEEEECCCCcEEEEEecCCeEEEEECCcee
Q psy12614 458 VLISADSTLLLAVSLNGP-----LYIIDLSSLEIKYCVDPYKSNLMSDVISLVQMSECKQYIVCADRKSHVVIWKNGQHH 532 (708)
Q Consensus 458 ~~~s~d~~~l~~~~~dg~-----i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~ 532 (708)
++|-|.|..+++...||. +.-++.+. -.-..+....+. ...+..++|+-....+|.+ ..+.+++|-..+..
T Consensus 252 LSWkpqgS~~ati~td~~~~S~~ViFfErNG-LrHGef~lr~~~--dEk~~~~~wn~~s~vlav~-~~n~~~lwttkNyh 327 (1243)
T COG5290 252 LSWKPQGSKYATIGTDGCSTSESVIFFERNG-LRHGEFDLRVGC--DEKAFLENWNLLSTVLAVA-EGNLLKLWTTKNYH 327 (1243)
T ss_pred cccccCCceeeeeccCCCCCcceEEEEccCC-cccCCccccCCc--hhhhhhhhhhHHHHHHHHh-hcceEEEEEccceE
Confidence 899999999999887765 33333221 111122222222 4456677777666666666 56789999988554
Q ss_pred e--ecCCCCCCceEEEEcCCC
Q psy12614 533 A--SLPRYRKPSTAMAIHPTL 551 (708)
Q Consensus 533 ~--~~~~~~~~v~~l~~s~d~ 551 (708)
+ .....-..+.-+.|+|..
T Consensus 328 WYLK~e~~ip~~s~vkwhpe~ 348 (1243)
T COG5290 328 WYLKVERQIPGISYVKWHPEE 348 (1243)
T ss_pred EEEEEeecCCCcceeeecccc
Confidence 4 222233456667777743
|
|
| >KOG4460|consensus | Back alignment and domain information |
|---|
Probab=89.52 E-value=26 Score=35.66 Aligned_cols=97 Identities=13% Similarity=0.146 Sum_probs=58.5
Q ss_pred cceeEEEEEecCCCeEEEEecCCc-EEEecCCCeEEEEEecCCCCCccCcceEEEEECCCCcEEEEEecCCeEEEEECCc
Q psy12614 452 KSIFTHVLISADSTLLLAVSLNGP-LYIIDLSSLEIKYCVDPYKSNLMSDVISLVQMSECKQYIVCADRKSHVVIWKNGQ 530 (708)
Q Consensus 452 ~~~i~~~~~s~d~~~l~~~~~dg~-i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~ 530 (708)
...|..+..++.|..++..+.+|. |..+... +-.-..++. | ...|+|-.++-+.+++ +.+
T Consensus 103 ~feV~~vl~s~~GS~VaL~G~~Gi~vMeLp~r-wG~~s~~eD--g---k~~v~CRt~~i~~~~f-tss------------ 163 (741)
T KOG4460|consen 103 LFEVYQVLLSPTGSHVALIGIKGLMVMELPKR-WGKNSEFED--G---KSTVNCRTTPVAERFF-TSS------------ 163 (741)
T ss_pred eEEEEEEEecCCCceEEEecCCeeEEEEchhh-cCccceecC--C---CceEEEEeecccceee-ccC------------
Confidence 345566888999999999999998 4444211 000011211 1 2235555554443322 222
Q ss_pred eeeecCCCCCCceEEEEcCCC---CEEEEEecCCcEEEEEcCCCCCC
Q psy12614 531 HHASLPRYRKPSTAMAIHPTL---STLVTVYSDHRIVEFDLNRKAFT 574 (708)
Q Consensus 531 ~~~~~~~~~~~v~~l~~s~d~---~~l~~~~~dg~i~vwd~~~~~~~ 574 (708)
..-.+..++|+|+. ..|..-+.|+.|++||+......
T Consensus 164 -------~~ltl~Qa~WHP~S~~D~hL~iL~sdnviRiy~lS~~tel 203 (741)
T KOG4460|consen 164 -------TSLTLKQAAWHPSSILDPHLVLLTSDNVIRIYSLSEPTEL 203 (741)
T ss_pred -------CceeeeeccccCCccCCceEEEEecCcEEEEEecCCcchh
Confidence 11245677888864 67888899999999999876544
|
|
| >PF02333 Phytase: Phytase; InterPro: IPR003431 Phytase (3 | Back alignment and domain information |
|---|
Probab=89.36 E-value=24 Score=35.04 Aligned_cols=191 Identities=10% Similarity=0.111 Sum_probs=102.4
Q ss_pred CCEEEEEcCCCeEEEEeCCCCceeecCccCCCCceEEEE----cCCcE--E-EEE-c-C--CeEEEEEecCCCCCCCCCC
Q psy12614 312 GNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLA----KDIQH--V-LLQ-Y-T--SHLELWSLGSAQSTDLSSH 380 (708)
Q Consensus 312 ~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s----~~~~~--l-~~~-~-~--~~i~i~~~~~~~~~~~~~~ 380 (708)
..+++....++-+.+||+..+.+..+. ......+.+- -+|+. | +++ . + +.|.+|.+....
T Consensus 68 kSlIigTdK~~GL~VYdL~Gk~lq~~~--~Gr~NNVDvrygf~l~g~~vDlavas~R~~g~n~l~~f~id~~~------- 138 (381)
T PF02333_consen 68 KSLIIGTDKKGGLYVYDLDGKELQSLP--VGRPNNVDVRYGFPLNGKTVDLAVASDRSDGRNSLRLFRIDPDT------- 138 (381)
T ss_dssp G-EEEEEETTTEEEEEETTS-EEEEE---SS-EEEEEEEEEEEETTEEEEEEEEEE-CCCT-EEEEEEEETTT-------
T ss_pred cceEEEEeCCCCEEEEcCCCcEEEeec--CCCcceeeeecceecCCceEEEEEEecCcCCCCeEEEEEecCCC-------
Confidence 356777778899999999999887775 3333333332 23443 2 333 2 2 579999987532
Q ss_pred CCCCcccCCCCceEEEEEE------ecCCCceEEEEe--CC-CCcEEEE--EcCCceEEEEEEec-CCcceeEEeecCCc
Q psy12614 381 SNTTGVPLLSFPRLIVKMS------AVNNATIRCSVV--SN-DGKYVAY--STESCVRLHSLDLD-GDKPQISRIKNLPA 448 (708)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~------~~~~~~i~~~~~--s~-~g~~l~~--~~d~~i~i~~~~~~-~~~~~~~~~~~~~~ 448 (708)
..+..+. ......+..+++ ++ +|++.+. +.+|.+.-|.+... .+.+..+.++++..
T Consensus 139 ------------g~L~~v~~~~~p~~~~~~e~yGlcly~~~~~g~~ya~v~~k~G~~~Qy~L~~~~~g~v~~~lVR~f~~ 206 (381)
T PF02333_consen 139 ------------GELTDVTDPAAPIATDLSEPYGLCLYRSPSTGALYAFVNGKDGRVEQYELTDDGDGKVSATLVREFKV 206 (381)
T ss_dssp ------------TEEEE-CBTTC-EE-SSSSEEEEEEEE-TTT--EEEEEEETTSEEEEEEEEE-TTSSEEEEEEEEEE-
T ss_pred ------------CcceEcCCCCcccccccccceeeEEeecCCCCcEEEEEecCCceEEEEEEEeCCCCcEeeEEEEEecC
Confidence 1121111 011233555554 44 5666554 44899999999753 33444444443433
Q ss_pred ccccceeEEEEEecCCCeEEEEecCCcEEEecCC-----CeEEEEEecCCCCCccCcceEEEEEC--CCC-cEEEEEe-c
Q psy12614 449 PLFKSIFTHVLISADSTLLLAVSLNGPLYIIDLS-----SLEIKYCVDPYKSNLMSDVISLVQMS--ECK-QYIVCAD-R 519 (708)
Q Consensus 449 ~~~~~~i~~~~~s~d~~~l~~~~~dg~i~~~~~~-----~~~~~~~~~~~~~~~~~~~i~~~~~s--~~~-~~l~~~~-~ 519 (708)
.. .+..++.......|+.+-.+.-||.+... ....+.... ..+. ...|..+++- +++ .||++++ .
T Consensus 207 ~s---Q~EGCVVDDe~g~LYvgEE~~GIW~y~Aep~~~~~~~~v~~~~-g~~l--~aDvEGlaly~~~~g~gYLivSsQG 280 (381)
T PF02333_consen 207 GS---QPEGCVVDDETGRLYVGEEDVGIWRYDAEPEGGNDRTLVASAD-GDGL--VADVEGLALYYGSDGKGYLIVSSQG 280 (381)
T ss_dssp SS----EEEEEEETTTTEEEEEETTTEEEEEESSCCC-S--EEEEEBS-SSSB---S-EEEEEEEE-CCC-EEEEEEEGG
T ss_pred CC---cceEEEEecccCCEEEecCccEEEEEecCCCCCCcceeeeccc-cccc--ccCccceEEEecCCCCeEEEEEcCC
Confidence 22 45558888888888887777669998653 122222222 1222 5567777764 333 3555555 6
Q ss_pred CCeEEEEECC
Q psy12614 520 KSHVVIWKNG 529 (708)
Q Consensus 520 d~~i~iw~~~ 529 (708)
+++..||+..
T Consensus 281 ~~sf~Vy~r~ 290 (381)
T PF02333_consen 281 DNSFAVYDRE 290 (381)
T ss_dssp GTEEEEEESS
T ss_pred CCeEEEEecC
Confidence 7789999876
|
1.3.8 from EC) (phytate 3-phosphatase) is a secreted enzyme which hydrolyses phytate to release inorganic phosphate. This family appears to represent a novel enzyme that shows phytase activity () and has been shown to consist of a single structural unit with a six-bladed propeller folding architecture ().; GO: 0016158 3-phytase activity; PDB: 3AMS_A 3AMR_A 1QLG_A 2POO_A 1H6L_A 1CVM_A 1POO_A. |
| >KOG2247|consensus | Back alignment and domain information |
|---|
Probab=88.24 E-value=0.087 Score=51.81 Aligned_cols=148 Identities=16% Similarity=0.215 Sum_probs=100.2
Q ss_pred EEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE--EEEEcCCCcEEEEeCCCC
Q psy12614 158 ILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT--IITGDSGGFVRFWDGKTG 234 (708)
Q Consensus 158 v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--l~~~~~dg~i~~wd~~~~ 234 (708)
.....|-|.+.-++.++.+ .+..||- .++....... ......++|..++- ++.+-..+.+.+||+.+.
T Consensus 37 pi~~~w~~e~~nlavaca~tiv~~YD~-agq~~le~n~--------tg~aldm~wDkegdvlavlAek~~piylwd~n~e 107 (615)
T KOG2247|consen 37 PIIHRWRPEGHNLAVACANTIVIYYDK-AGQVILELNP--------TGKALDMAWDKEGDVLAVLAEKTGPIYLWDVNSE 107 (615)
T ss_pred cceeeEecCCCceehhhhhhHHHhhhh-hcceecccCC--------chhHhhhhhccccchhhhhhhcCCCeeechhhhh
Confidence 3455677877778888888 8888884 3444433322 45566788888773 566777899999998754
Q ss_pred eeEEEee-ccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe-C
Q psy12614 235 VQWSDVK-THKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH-G 312 (708)
Q Consensus 235 ~~~~~~~-~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~-~ 312 (708)
.. +.+. +....-.-+.|++.+..++.+...|.+.+++..+ .. .....-.|...++++++. .
T Consensus 108 yt-qqLE~gg~~s~sll~wsKg~~el~ig~~~gn~viynhgt--------sR--------~iiv~Gkh~RRgtq~av~lE 170 (615)
T KOG2247|consen 108 YT-QQLESGGTSSKSLLAWSKGTPELVIGNNAGNIVIYNHGT--------SR--------RIIVMGKHQRRGTQIAVTLE 170 (615)
T ss_pred hH-HHHhccCcchHHHHhhccCCccccccccccceEEEeccc--------hh--------hhhhhcccccceeEEEeccc
Confidence 22 1111 1111222278899888999999999999999887 32 122223388899999999 8
Q ss_pred CEEEEEcCCCeEEEEeCCC
Q psy12614 313 NRLYSGGLDSYLSLSYYPP 331 (708)
Q Consensus 313 ~~l~s~~~d~~i~iw~~~~ 331 (708)
++.+.++.|..+.+-...+
T Consensus 171 d~vil~dcd~~L~v~~qeg 189 (615)
T KOG2247|consen 171 DYVILCDCDNTLSVTTQEG 189 (615)
T ss_pred ceeeecCcHHHHHHhhhcc
Confidence 8888888887665544333
|
|
| >PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal | Back alignment and domain information |
|---|
Probab=88.16 E-value=13 Score=30.33 Aligned_cols=105 Identities=12% Similarity=0.057 Sum_probs=65.3
Q ss_pred CCEEEEEcCCCcEEEEECCCCe--------EeEEEeecCCceEEEEEec-----CCCEEEEEeCCCcEEEEEccCCcEEE
Q psy12614 81 NDRLFSGGLQGFVNEYDMRRLN--------IKSSTAVTSGTCWCLSVHK-----KKRLLAAGTEQGHINLFQISDEGLLY 147 (708)
Q Consensus 81 ~~~l~s~~~d~~i~vwd~~~~~--------~~~~~~~~~~~v~~~~~s~-----~~~~la~~~~d~~i~iwd~~~~~~~~ 147 (708)
...|+.++.-|+|.|.+..... .+..+. -...|++++-.+ +...|+.|+. ..+..||+....-++
T Consensus 10 ~pcL~~aT~~gKV~IH~ph~~~~~~~~~~~~i~~LN-in~~italaaG~l~~~~~~D~LliGt~-t~llaYDV~~N~d~F 87 (136)
T PF14781_consen 10 HPCLACATTGGKVFIHNPHERGQRTGRQDSDISFLN-INQEITALAAGRLKPDDGRDCLLIGTQ-TSLLAYDVENNSDLF 87 (136)
T ss_pred ceeEEEEecCCEEEEECCCccccccccccCceeEEE-CCCceEEEEEEecCCCCCcCEEEEecc-ceEEEEEcccCchhh
Confidence 3467778888888888866432 233333 345677776544 3446666654 679999999877654
Q ss_pred EEecccccccEEEEEE---CCCCCEEEEecCC-eEEEEEcCCCceEE
Q psy12614 148 EKLLDRQQGRILCTAW---HSSGDYLVTGCAA-AVRVWDIHKGHAIH 190 (708)
Q Consensus 148 ~~~~~~~~~~v~~~~~---s~d~~~l~~~~~d-~i~iwd~~~~~~~~ 190 (708)
.+.+ .+.|.++.+ .....-|+..+.+ .|.-+|.+..+...
T Consensus 88 yke~---~DGvn~i~~g~~~~~~~~l~ivGGncsi~Gfd~~G~e~fW 131 (136)
T PF14781_consen 88 YKEV---PDGVNAIVIGKLGDIPSPLVIVGGNCSIQGFDYEGNEIFW 131 (136)
T ss_pred hhhC---ccceeEEEEEecCCCCCcEEEECceEEEEEeCCCCcEEEE
Confidence 3333 456777766 3323445556666 89888876544443
|
|
| >PRK14131 N-acetylneuraminic acid mutarotase; Provisional | Back alignment and domain information |
|---|
Probab=87.72 E-value=34 Score=34.65 Aligned_cols=26 Identities=8% Similarity=0.082 Sum_probs=17.1
Q ss_pred cCCCEEEEEeCC-----------CcEEEEEccCCcEE
Q psy12614 121 KKKRLLAAGTEQ-----------GHINLFQISDEGLL 146 (708)
Q Consensus 121 ~~~~~la~~~~d-----------~~i~iwd~~~~~~~ 146 (708)
-++...+.|+.. ..+..||..+.+..
T Consensus 83 ~~~~IYV~GG~~~~~~~~~~~~~~~v~~YD~~~n~W~ 119 (376)
T PRK14131 83 IDGKLYVFGGIGKTNSEGSPQVFDDVYKYDPKTNSWQ 119 (376)
T ss_pred ECCEEEEEcCCCCCCCCCceeEcccEEEEeCCCCEEE
Confidence 356666666643 24778888887764
|
|
| >PF12768 Rax2: Cortical protein marker for cell polarity | Back alignment and domain information |
|---|
Probab=87.59 E-value=11 Score=35.81 Aligned_cols=92 Identities=17% Similarity=0.189 Sum_probs=61.5
Q ss_pred CCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEe------CCCcEEEEEccCCcEEEEEeccc-----ccccE
Q psy12614 90 QGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGT------EQGHINLFQISDEGLLYEKLLDR-----QQGRI 158 (708)
Q Consensus 90 d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~------~d~~i~iwd~~~~~~~~~~~~~~-----~~~~v 158 (708)
...|++||..+.+-...-.+-.+.|.+|.|..+.++++.|. ....+..||..+.... .+.+ -.++|
T Consensus 15 C~~lC~yd~~~~qW~~~g~~i~G~V~~l~~~~~~~Llv~G~ft~~~~~~~~la~yd~~~~~w~---~~~~~~s~~ipgpv 91 (281)
T PF12768_consen 15 CPGLCLYDTDNSQWSSPGNGISGTVTDLQWASNNQLLVGGNFTLNGTNSSNLATYDFKNQTWS---SLGGGSSNSIPGPV 91 (281)
T ss_pred CCEEEEEECCCCEeecCCCCceEEEEEEEEecCCEEEEEEeeEECCCCceeEEEEecCCCeee---ecCCcccccCCCcE
Confidence 45699999988775555555668899999997777777764 3556889999988773 3333 24788
Q ss_pred EEEEECC-CCCEEE-Eec---CC-eEEEEEcC
Q psy12614 159 LCTAWHS-SGDYLV-TGC---AA-AVRVWDIH 184 (708)
Q Consensus 159 ~~~~~s~-d~~~l~-~~~---~d-~i~iwd~~ 184 (708)
..+.+.. |+..+. .|. .+ .|..||-.
T Consensus 92 ~a~~~~~~d~~~~~~aG~~~~g~~~l~~~dGs 123 (281)
T PF12768_consen 92 TALTFISNDGSNFWVAGRSANGSTFLMKYDGS 123 (281)
T ss_pred EEEEeeccCCceEEEeceecCCCceEEEEcCC
Confidence 8887743 343343 332 12 67777643
|
|
| >PF12768 Rax2: Cortical protein marker for cell polarity | Back alignment and domain information |
|---|
Probab=87.48 E-value=13 Score=35.35 Aligned_cols=115 Identities=17% Similarity=0.221 Sum_probs=68.7
Q ss_pred CcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEec------CC-eEEEEEcCCCceEEEEEecc-cCCCCCce
Q psy12614 133 GHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGC------AA-AVRVWDIHKGHAIHKMSLDK-SSKFSKNT 204 (708)
Q Consensus 133 ~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~------~d-~i~iwd~~~~~~~~~~~~~~-~~~~~~~~ 204 (708)
..|++||..+.+.. ..-.+-.+.|.++.|..+.+.++.|. .. .+..||+.+..- ..+.... . ...+
T Consensus 16 ~~lC~yd~~~~qW~--~~g~~i~G~V~~l~~~~~~~Llv~G~ft~~~~~~~~la~yd~~~~~w-~~~~~~~s~---~ipg 89 (281)
T PF12768_consen 16 PGLCLYDTDNSQWS--SPGNGISGTVTDLQWASNNQLLVGGNFTLNGTNSSNLATYDFKNQTW-SSLGGGSSN---SIPG 89 (281)
T ss_pred CEEEEEECCCCEee--cCCCCceEEEEEEEEecCCEEEEEEeeEECCCCceeEEEEecCCCee-eecCCcccc---cCCC
Confidence 45999999988885 44555678999999987777776654 34 799999876643 2222210 0 1246
Q ss_pred eEEEEEEcc-CC-EEE-EEc-C--CCcEEEEeCCCCeeEEE-eeccccCeEEEEEe
Q psy12614 205 AVWCVAFCA-DF-TII-TGD-S--GGFVRFWDGKTGVQWSD-VKTHKKDILALTVS 253 (708)
Q Consensus 205 ~v~~~~~~~-~~-~l~-~~~-~--dg~i~~wd~~~~~~~~~-~~~~~~~i~~~~~s 253 (708)
++..+.+.. |+ ++. +|. . +..|..||-.+...+.. .......|..+.+-
T Consensus 90 pv~a~~~~~~d~~~~~~aG~~~~g~~~l~~~dGs~W~~i~~~~~~~~t~I~~l~~~ 145 (281)
T PF12768_consen 90 PVTALTFISNDGSNFWVAGRSANGSTFLMKYDGSSWSSIGSDILGSGTTIRGLQVL 145 (281)
T ss_pred cEEEEEeeccCCceEEEeceecCCCceEEEEcCCceEeccccccCCCCEEEEEEEE
Confidence 788877754 33 333 333 2 33577777555444433 22223455555443
|
|
| >TIGR03606 non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH family | Back alignment and domain information |
|---|
Probab=87.48 E-value=26 Score=36.02 Aligned_cols=58 Identities=17% Similarity=0.116 Sum_probs=39.3
Q ss_pred cCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecc-----cccccEEEEEECCCC
Q psy12614 110 TSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLD-----RQQGRILCTAWHSSG 167 (708)
Q Consensus 110 ~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~-----~~~~~v~~~~~s~d~ 167 (708)
.-...+.|+|.|||++|++--..|.|++++-.++.......+. ...+....|+++|+-
T Consensus 28 GL~~Pw~maflPDG~llVtER~~G~I~~v~~~~~~~~~~~~l~~v~~~~ge~GLlglal~PdF 90 (454)
T TIGR03606 28 GLNKPWALLWGPDNQLWVTERATGKILRVNPETGEVKVVFTLPEIVNDAQHNGLLGLALHPDF 90 (454)
T ss_pred CCCCceEEEEcCCCeEEEEEecCCEEEEEeCCCCceeeeecCCceeccCCCCceeeEEECCCc
Confidence 3456889999999987776444699999986655432111121 135678999999884
|
PQQ, or pyrroloquinoline-quinone, serves as a cofactor for a number of sugar and alcohol dehydrogenases in a limited number of bacterial species. Most characterized PQQ-dependent enzymes have multiple repeats of a sequence region described by pfam01011 (PQQ enzyme repeat), but this protein family in unusual in lacking that repeat. Below the noise cutoff are related proteins mostly from species that lack PQQ biosynthesis. |
| >PRK10115 protease 2; Provisional | Back alignment and domain information |
|---|
Probab=87.45 E-value=51 Score=36.48 Aligned_cols=110 Identities=8% Similarity=-0.034 Sum_probs=66.3
Q ss_pred ccEEEEEECCCCCEEEEec-----CC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcC------
Q psy12614 156 GRILCTAWHSSGDYLVTGC-----AA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDS------ 222 (708)
Q Consensus 156 ~~v~~~~~s~d~~~l~~~~-----~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~------ 222 (708)
-.+..+.++|||++|+.+. .. .|++.|+.+|..+..... ..-..++|.+|++ |+....
T Consensus 127 ~~l~~~~~Spdg~~la~~~d~~G~E~~~l~v~d~~tg~~l~~~i~---------~~~~~~~w~~D~~~~~y~~~~~~~~~ 197 (686)
T PRK10115 127 YTLGGMAITPDNTIMALAEDFLSRRQYGIRFRNLETGNWYPELLD---------NVEPSFVWANDSWTFYYVRKHPVTLL 197 (686)
T ss_pred EEEeEEEECCCCCEEEEEecCCCcEEEEEEEEECCCCCCCCcccc---------CcceEEEEeeCCCEEEEEEecCCCCC
Confidence 3466788999999988642 23 699999988864322211 1114589999985 443322
Q ss_pred CCcEEEEeCCCC--eeEEEeeccccCeE-EEEEeCCCCEEEEEec---CCeEEEEEcc
Q psy12614 223 GGFVRFWDGKTG--VQWSDVKTHKKDIL-ALTVSEDENYLYCAGV---DPTVVCFQRT 274 (708)
Q Consensus 223 dg~i~~wd~~~~--~~~~~~~~~~~~i~-~~~~s~~~~~l~~~~~---dg~i~iw~~~ 274 (708)
...|+.+++.++ +....+........ ....+.++++++..+. ++.+.+++..
T Consensus 198 ~~~v~~h~lgt~~~~d~lv~~e~~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~l~~~~ 255 (686)
T PRK10115 198 PYQVWRHTIGTPASQDELVYEEKDDTFYVSLHKTTSKHYVVIHLASATTSEVLLLDAE 255 (686)
T ss_pred CCEEEEEECCCChhHCeEEEeeCCCCEEEEEEEcCCCCEEEEEEECCccccEEEEECc
Confidence 246888898887 33333433223233 3344558887765443 3468888853
|
|
| >KOG2103|consensus | Back alignment and domain information |
|---|
Probab=87.24 E-value=48 Score=35.95 Aligned_cols=81 Identities=15% Similarity=0.176 Sum_probs=58.1
Q ss_pred CCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEeCCEEEEEcCC-CcEEEEECCCCeEe
Q psy12614 26 PKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWFNDRLFSGGLQ-GFVNEYDMRRLNIK 104 (708)
Q Consensus 26 ~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~~~~l~s~~~d-~~i~vwd~~~~~~~ 104 (708)
...++.+.+++..++|++.++.|.+.=-++.+|+..-+...+.+ .+...+-+.. +.+.| ..++.||...|...
T Consensus 35 ~~k~~~~~~~t~~~rlivsT~~~vlAsL~~~tGei~WRqvl~~~--~~~~~~~~~~----~iS~dg~~lr~wn~~~g~l~ 108 (910)
T KOG2103|consen 35 VKKVNFLVYDTKSKRLIVSTEKGVLASLNLRTGEIIWRQVLEPK--TSGLGVPLTN----TISVDGRYLRSWNTNNGILD 108 (910)
T ss_pred ceeEEEEeecCCCceEEEEeccchhheecccCCcEEEEEeccCC--CcccCcceeE----EEccCCcEEEeecCCCceee
Confidence 55788899999999999999999999999999987654444433 2222222211 23333 46899999999988
Q ss_pred EEEeecCC
Q psy12614 105 SSTAVTSG 112 (708)
Q Consensus 105 ~~~~~~~~ 112 (708)
..+.-+.+
T Consensus 109 ~~i~l~~g 116 (910)
T KOG2103|consen 109 WEIELADG 116 (910)
T ss_pred eecccccc
Confidence 88887766
|
|
| >PF11725 AvrE: Pathogenicity factor; InterPro: IPR021085 This family is secreted by Gram-negative Gammaproteobacteria such as Pseudomonas syringae of tomato and Erwinia amylovora (Fire blight bacteria), amongst others | Back alignment and domain information |
|---|
Probab=87.12 E-value=31 Score=40.83 Aligned_cols=72 Identities=15% Similarity=0.203 Sum_probs=48.2
Q ss_pred ccEEEEEECCCCCEE-EEecCC-eEEEEEcCCC------ceEEEEEecccCCCCCceeEEEEEEccCCEEEEEcCCCcEE
Q psy12614 156 GRILCTAWHSSGDYL-VTGCAA-AVRVWDIHKG------HAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVR 227 (708)
Q Consensus 156 ~~v~~~~~s~d~~~l-~~~~~d-~i~iwd~~~~------~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~ 227 (708)
..+.+...+++|+.- +++-.. .+.+|++... +....+.... ......+|.+++| +|++.+.+|.++
T Consensus 438 ~~l~sfSv~~~g~vA~L~~~d~q~~qL~~m~~~~a~~~p~~~~~L~L~d-----G~a~A~~VgLs~d-rLFvADseGkLY 511 (1774)
T PF11725_consen 438 DKLKSFSVAPDGTVAMLTGKDGQTLQLHDMSPVDAPPTPRKTKTLQLAD-----GKAQAQSVGLSND-RLFVADSEGKLY 511 (1774)
T ss_pred hhcccccccCCCceeeeecCCCcceeeeccCccccccCccceeeeeccC-----CchhhhheeecCC-eEEEEeCCCCEE
Confidence 456777888999884 444445 8899998653 1112233221 1336778888776 799999999998
Q ss_pred EEeCCC
Q psy12614 228 FWDGKT 233 (708)
Q Consensus 228 ~wd~~~ 233 (708)
.=++..
T Consensus 512 sa~l~~ 517 (1774)
T PF11725_consen 512 SADLPA 517 (1774)
T ss_pred eccccc
Confidence 877653
|
It is an essential pathogenicity factor of approximately 198 kDa. Its injection into the host-plant is dependent upon the bacterial type III or Hrp secretion system []. The family is long and carries a number of predicted functional regions, including an ERMS or endoplasmic reticulum membrane retention signal at both the C- and the N-termini, a leucine-zipper motif from residues 539-560, and a nuclear localisation signal at 1358-1361. This conserved AvrE-family of effectors is among the few that are required for full virulence of many phytopathogenic pseudomonads, erwinias and pantoeas []. |
| >COG4257 Vgb Streptogramin lyase [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=87.05 E-value=26 Score=32.58 Aligned_cols=239 Identities=8% Similarity=-0.009 Sum_probs=138.6
Q ss_pred CceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCCeEEEEEcCCCceEEE
Q psy12614 112 GTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAAAVRVWDIHKGHAIHK 191 (708)
Q Consensus 112 ~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~i~iwd~~~~~~~~~ 191 (708)
..-..++-.|||..-.++...+.|--.|-.+|+.. ..-.+....-..+..-|||..-++-+...|.-.|.++.+.. +
T Consensus 62 ~ap~dvapapdG~VWft~qg~gaiGhLdP~tGev~--~ypLg~Ga~Phgiv~gpdg~~Witd~~~aI~R~dpkt~evt-~ 138 (353)
T COG4257 62 SAPFDVAPAPDGAVWFTAQGTGAIGHLDPATGEVE--TYPLGSGASPHGIVVGPDGSAWITDTGLAIGRLDPKTLEVT-R 138 (353)
T ss_pred CCccccccCCCCceEEecCccccceecCCCCCceE--EEecCCCCCCceEEECCCCCeeEecCcceeEEecCcccceE-E
Confidence 45567888899988888888888888898999886 33344455667888899998777655546666676665543 2
Q ss_pred EEecccCCCCCceeEEEEEEccCCEEEEEcCCCcEEEEeCCCCeeEEEeec-cccCeEEEEEeCCCCEEEEEecCCeEEE
Q psy12614 192 MSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVKT-HKKDILALTVSEDENYLYCAGVDPTVVC 270 (708)
Q Consensus 192 ~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~-~~~~i~~~~~s~~~~~l~~~~~dg~i~i 270 (708)
+..... ..........|.+.|++-.....|.---.|..+ ..+..+.. ....-..++..|||..-++.-.+..|-.
T Consensus 139 f~lp~~---~a~~nlet~vfD~~G~lWFt~q~G~yGrLdPa~-~~i~vfpaPqG~gpyGi~atpdGsvwyaslagnaiar 214 (353)
T COG4257 139 FPLPLE---HADANLETAVFDPWGNLWFTGQIGAYGRLDPAR-NVISVFPAPQGGGPYGICATPDGSVWYASLAGNAIAR 214 (353)
T ss_pred eecccc---cCCCcccceeeCCCccEEEeeccccceecCccc-CceeeeccCCCCCCcceEECCCCcEEEEeccccceEE
Confidence 332221 125667788899998743333333221222211 12222222 2234567889999988887767777777
Q ss_pred EEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEEEcCCCeEEEEeCCCCceeecC--ccCCCCce
Q psy12614 271 FQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSGGLDSYLSLSYYPPKTLVKYP--CTLAQSTP 346 (708)
Q Consensus 271 w~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~~~~~~~~--~~~~~~~~ 346 (708)
.|... +. .+. +..-.......+.+-.+ +..-++....+.+..+|........++ +......+
T Consensus 215 idp~~--------~~----aev--~p~P~~~~~gsRriwsdpig~~wittwg~g~l~rfdPs~~sW~eypLPgs~arpys 280 (353)
T COG4257 215 IDPFA--------GH----AEV--VPQPNALKAGSRRIWSDPIGRAWITTWGTGSLHRFDPSVTSWIEYPLPGSKARPYS 280 (353)
T ss_pred ccccc--------CC----cce--ecCCCcccccccccccCccCcEEEeccCCceeeEeCcccccceeeeCCCCCCCcce
Confidence 77766 32 000 00000101122222222 566666666777877877776655444 33334456
Q ss_pred EEEEcCCcEEEE-EcCCeEEEEEecC
Q psy12614 347 VSLAKDIQHVLL-QYTSHLELWSLGS 371 (708)
Q Consensus 347 ~~~s~~~~~l~~-~~~~~i~i~~~~~ 371 (708)
+.+...++.-++ ...+.|.-+|-++
T Consensus 281 ~rVD~~grVW~sea~agai~rfdpet 306 (353)
T COG4257 281 MRVDRHGRVWLSEADAGAIGRFDPET 306 (353)
T ss_pred eeeccCCcEEeeccccCceeecCccc
Confidence 666666665554 3445566665554
|
|
| >KOG4460|consensus | Back alignment and domain information |
|---|
Probab=86.63 E-value=6.8 Score=39.55 Aligned_cols=95 Identities=16% Similarity=0.191 Sum_probs=63.8
Q ss_pred cEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe-CCEEEEEcCCCcEEEEECCCCeEeEE
Q psy12614 28 VINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF-NDRLFSGGLQGFVNEYDMRRLNIKSS 106 (708)
Q Consensus 28 ~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~-~~~l~s~~~d~~i~vwd~~~~~~~~~ 106 (708)
.|..+..++.|..+|..+.+|.+.. .+...+-....+...+ ..|+|=.+. +..+++.+..
T Consensus 105 eV~~vl~s~~GS~VaL~G~~Gi~vM-eLp~rwG~~s~~eDgk--~~v~CRt~~i~~~~ftss~~---------------- 165 (741)
T KOG4460|consen 105 EVYQVLLSPTGSHVALIGIKGLMVM-ELPKRWGKNSEFEDGK--STVNCRTTPVAERFFTSSTS---------------- 165 (741)
T ss_pred EEEEEEecCCCceEEEecCCeeEEE-EchhhcCccceecCCC--ceEEEEeecccceeeccCCc----------------
Confidence 4677888999999998888875444 4432221112455444 568887777 7766665421
Q ss_pred EeecCCceEEEEEecCC---CEEEEEeCCCcEEEEEccCCcEE
Q psy12614 107 TAVTSGTCWCLSVHKKK---RLLAAGTEQGHINLFQISDEGLL 146 (708)
Q Consensus 107 ~~~~~~~v~~~~~s~~~---~~la~~~~d~~i~iwd~~~~~~~ 146 (708)
-.+...+|+|+. ..|..-+.|+.|++||.....-+
T Consensus 166 -----ltl~Qa~WHP~S~~D~hL~iL~sdnviRiy~lS~~tel 203 (741)
T KOG4460|consen 166 -----LTLKQAAWHPSSILDPHLVLLTSDNVIRIYSLSEPTEL 203 (741)
T ss_pred -----eeeeeccccCCccCCceEEEEecCcEEEEEecCCcchh
Confidence 235567888865 57777789999999999866543
|
|
| >PF14761 HPS3_N: Hermansky-Pudlak syndrome 3 | Back alignment and domain information |
|---|
Probab=86.36 E-value=24 Score=31.60 Aligned_cols=109 Identities=15% Similarity=0.215 Sum_probs=69.0
Q ss_pred EEEEeC-CEEEEEcCCCcEEEEECCC--CeEeEEEeecCCceEEEEEecCCCEEEEEeCC---C---cEEEE-EccC---
Q psy12614 76 CLTWFN-DRLFSGGLQGFVNEYDMRR--LNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQ---G---HINLF-QISD--- 142 (708)
Q Consensus 76 ~l~~~~-~~l~s~~~d~~i~vwd~~~--~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d---~---~i~iw-d~~~--- 142 (708)
.++-.| +.|+.+...+.|.+|++.+ .+.+..+..- +.|..++++..|++|++--.+ . .+|+| +++.
T Consensus 22 ~~c~~g~d~Lfva~~g~~Vev~~l~~~~~~~~~~F~Tv-~~V~~l~y~~~GDYlvTlE~k~~~~~~~fvR~Y~NWr~~~~ 100 (215)
T PF14761_consen 22 AVCCGGPDALFVAASGCKVEVYDLEQEECPLLCTFSTV-GRVLQLVYSEAGDYLVTLEEKNKRSPVDFVRAYFNWRSQKE 100 (215)
T ss_pred eeeccCCceEEEEcCCCEEEEEEcccCCCceeEEEcch-hheeEEEeccccceEEEEEeecCCccceEEEEEEEhhhhcc
Confidence 333335 7787778888999999983 3455566544 789999999999999986432 2 45654 2321
Q ss_pred -CcEEEEEeccc---------------------ccccEEEEEECCCCCEEEEecCCeEEEEEcCCC
Q psy12614 143 -EGLLYEKLLDR---------------------QQGRILCTAWHSSGDYLVTGCAAAVRVWDIHKG 186 (708)
Q Consensus 143 -~~~~~~~~~~~---------------------~~~~v~~~~~s~d~~~l~~~~~d~i~iwd~~~~ 186 (708)
...+. ..+-| -..++.+++-.|-.--|+.|+.+.+.+|.+...
T Consensus 101 ~~~~v~-vRiaG~~v~~~~~~~~~~qleiiElPl~~~p~ciaCC~~tG~LlVg~~~~l~lf~l~~~ 165 (215)
T PF14761_consen 101 ENSPVR-VRIAGHRVTPSFNESSKDQLEIIELPLSEPPLCIACCPVTGNLLVGCGNKLVLFTLKYQ 165 (215)
T ss_pred cCCcEE-EEEcccccccCCCCccccceEEEEecCCCCCCEEEecCCCCCEEEEcCCEEEEEEEEEE
Confidence 11111 11111 133556677666555677788888888887543
|
|
| >PF12657 TFIIIC_delta: Transcription factor IIIC subunit delta N-term; InterPro: IPR024761 This entry represents a domain found towards the N terminus of the 90 kDa subunit of transcription factor IIIC (also known as subunit 9 in yeast []) | Back alignment and domain information |
|---|
Probab=86.19 E-value=6.9 Score=34.26 Aligned_cols=31 Identities=6% Similarity=0.044 Sum_probs=26.2
Q ss_pred cCeEEEEEeCCC------CEEEEEecCCeEEEEEccC
Q psy12614 245 KDILALTVSEDE------NYLYCAGVDPTVVCFQRTR 275 (708)
Q Consensus 245 ~~i~~~~~s~~~------~~l~~~~~dg~i~iw~~~~ 275 (708)
..+..++|||.| -.|++.+.++.+.+|....
T Consensus 86 ~~vv~~aWSP~Gl~~~~rClLavLTs~~~l~l~~~~~ 122 (173)
T PF12657_consen 86 SQVVSAAWSPSGLGPNGRCLLAVLTSNGRLSLYGPPG 122 (173)
T ss_pred ccEEEEEECCCCCCCCCceEEEEEcCCCeEEEEecCC
Confidence 478999999965 4788899999999998765
|
The whole subunit is involved in RNA polymerase III-mediated transcription. It is possible that this N-terminal domain interacts with TFIIIC subunit 8 []. |
| >TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat | Back alignment and domain information |
|---|
Probab=86.11 E-value=3.6 Score=25.48 Aligned_cols=31 Identities=19% Similarity=0.271 Sum_probs=25.2
Q ss_pred CCCCEEEEecCC--eEEEEEcCCCceEEEEEec
Q psy12614 165 SSGDYLVTGCAA--AVRVWDIHKGHAIHKMSLD 195 (708)
Q Consensus 165 ~d~~~l~~~~~d--~i~iwd~~~~~~~~~~~~~ 195 (708)
|++++|+++..+ .|.++|..+++.+..+..+
T Consensus 1 pd~~~lyv~~~~~~~v~~id~~~~~~~~~i~vg 33 (42)
T TIGR02276 1 PDGTKLYVTNSGSNTVSVIDTATNKVIATIPVG 33 (42)
T ss_pred CCCCEEEEEeCCCCEEEEEECCCCeEEEEEECC
Confidence 678888777654 9999999999888888764
|
This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400). |
| >KOG1900|consensus | Back alignment and domain information |
|---|
Probab=85.52 E-value=10 Score=43.14 Aligned_cols=157 Identities=13% Similarity=0.149 Sum_probs=89.5
Q ss_pred eEEEEcCCcEEEEEcCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEE--------EeCCCCcE
Q psy12614 346 PVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCS--------VVSNDGKY 417 (708)
Q Consensus 346 ~~~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--------~~s~~g~~ 417 (708)
.+-+-|.-...-..-|+.+.+|+.+++.... ...+....|..+ .|-|.=++
T Consensus 83 ~mGiFpeI~RaWiTiDn~L~lWny~~~~e~~---------------------~~d~~shtIl~V~LvkPkpgvFv~~Iqh 141 (1311)
T KOG1900|consen 83 DMGIFPEIGRAWITIDNNLFLWNYESDNELA---------------------EYDGLSHTILKVGLVKPKPGVFVPEIQH 141 (1311)
T ss_pred eeccchhhcceEEEeCCeEEEEEcCCCCccc---------------------cccchhhhheeeeeecCCCCcchhhhhe
Confidence 3444455555556778889999998744100 011111122222 13333344
Q ss_pred EE-EEcCCceEEEEEEecCCcceeEEeecCCcc----cccceeEEEEEecCCCeEEEEecCCcEEEecCC--------Ce
Q psy12614 418 VA-YSTESCVRLHSLDLDGDKPQISRIKNLPAP----LFKSIFTHVLISADSTLLLAVSLNGPLYIIDLS--------SL 484 (708)
Q Consensus 418 l~-~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~----~~~~~i~~~~~s~d~~~l~~~~~dg~i~~~~~~--------~~ 484 (708)
+. .++.-.|.++-+...+....... +..+ .+...|+++....+|+.+.+| .||.||.+.-. .+
T Consensus 142 lLvvaT~~ei~ilgV~~~~~~~~~~~---f~~~~~i~~dg~~V~~I~~t~nGRIF~~G-~dg~lyEl~Yq~~~gWf~~rc 217 (1311)
T KOG1900|consen 142 LLVVATPVEIVILGVSFDEFTGELSI---FNTSFKISVDGVSVNCITYTENGRIFFAG-RDGNLYELVYQAEDGWFGSRC 217 (1311)
T ss_pred eEEecccceEEEEEEEeccccCcccc---cccceeeecCCceEEEEEeccCCcEEEee-cCCCEEEEEEeccCchhhccc
Confidence 44 46677777777765332211111 1111 113467888888888888754 55676665321 01
Q ss_pred EE-----------EEEecCCC-CCccCcceEEEEECCCCcEEEEEecCCeEEEEECC
Q psy12614 485 EI-----------KYCVDPYK-SNLMSDVISLVQMSECKQYIVCADRKSHVVIWKNG 529 (708)
Q Consensus 485 ~~-----------~~~~~~~~-~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~ 529 (708)
.. +..+.... .+ .++|..++.......|.+-++.|+|.+|++.
T Consensus 218 ~Kiclt~s~ls~lvPs~~~~~~~~--~dpI~qi~ID~SR~IlY~lsek~~v~~Y~i~ 272 (1311)
T KOG1900|consen 218 RKICLTKSVLSSLVPSLLSVPGSS--KDPIRQITIDNSRNILYVLSEKGTVSAYDIG 272 (1311)
T ss_pred ccccCchhHHHHhhhhhhcCCCCC--CCcceeeEeccccceeeeeccCceEEEEEcc
Confidence 11 11111222 33 6799999998888899999999999999998
|
|
| >TIGR03606 non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH family | Back alignment and domain information |
|---|
Probab=85.30 E-value=34 Score=35.14 Aligned_cols=62 Identities=5% Similarity=-0.074 Sum_probs=36.3
Q ss_pred CCCceEEEEeCCCCcEEEEEc-CCceEEEEEEecCCcceeEEeecCCcccccceeEEEEEecCC
Q psy12614 402 NNATIRCSVVSNDGKYVAYST-ESCVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVLISADS 464 (708)
Q Consensus 402 ~~~~i~~~~~s~~g~~l~~~~-d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~ 464 (708)
.-...+.++|.|||++|++-. .|.|++++-...... .+..+..+...........|+|+|+-
T Consensus 28 GL~~Pw~maflPDG~llVtER~~G~I~~v~~~~~~~~-~~~~l~~v~~~~ge~GLlglal~PdF 90 (454)
T TIGR03606 28 GLNKPWALLWGPDNQLWVTERATGKILRVNPETGEVK-VVFTLPEIVNDAQHNGLLGLALHPDF 90 (454)
T ss_pred CCCCceEEEEcCCCeEEEEEecCCEEEEEeCCCCcee-eeecCCceeccCCCCceeeEEECCCc
Confidence 445678999999999888876 699988864432111 11111111000012345569999885
|
PQQ, or pyrroloquinoline-quinone, serves as a cofactor for a number of sugar and alcohol dehydrogenases in a limited number of bacterial species. Most characterized PQQ-dependent enzymes have multiple repeats of a sequence region described by pfam01011 (PQQ enzyme repeat), but this protein family in unusual in lacking that repeat. Below the noise cutoff are related proteins mostly from species that lack PQQ biosynthesis. |
| >PF10214 Rrn6: RNA polymerase I-specific transcription-initiation factor; InterPro: IPR019350 RNA polymerase I-specific transcription-initiation factor Rrn6 and Rrn7 represent components of a multisubunit transcription factor essential for the initiation of rDNA transcription by Pol I [] | Back alignment and domain information |
|---|
Probab=85.09 E-value=72 Score=35.94 Aligned_cols=159 Identities=9% Similarity=0.068 Sum_probs=95.3
Q ss_pred ceeEEEEEe---c----CCCeEEEEecCCc-EEEec------CC-------CeEEEEEecCCCCCccCcceEEEEECC-C
Q psy12614 453 SIFTHVLIS---A----DSTLLLAVSLNGP-LYIID------LS-------SLEIKYCVDPYKSNLMSDVISLVQMSE-C 510 (708)
Q Consensus 453 ~~i~~~~~s---~----d~~~l~~~~~dg~-i~~~~------~~-------~~~~~~~~~~~~~~~~~~~i~~~~~s~-~ 510 (708)
.+|..|.|+ . ..++|++-..... |+... .. ....+..+....-. .....+++|+| +
T Consensus 80 ~PI~qI~fa~~~~~~~~~~~~l~Vrt~~st~I~~p~~~~~~~~~~~~~s~i~~~~l~~i~~~~tg--g~~~aDv~FnP~~ 157 (765)
T PF10214_consen 80 SPIKQIKFATLSESFDEKSRWLAVRTETSTTILRPEYHRVISSIRSRPSRIDPNPLLTISSSDTG--GFPHADVAFNPWD 157 (765)
T ss_pred CCeeEEEecccccccCCcCcEEEEEcCCEEEEEEcccccccccccCCccccccceeEEechhhcC--CCccceEEeccCc
Confidence 366667777 2 2357777666665 66511 11 11233333322211 44778999998 5
Q ss_pred CcEEEEEecCCeEEEEECC------ceee-ecCCCCC----------CceEEEEcCCCCEEEEEecCCcEEEEEcCCCCC
Q psy12614 511 KQYIVCADRKSHVVIWKNG------QHHA-SLPRYRK----------PSTAMAIHPTLSTLVTVYSDHRIVEFDLNRKAF 573 (708)
Q Consensus 511 ~~~l~~~~~d~~i~iw~~~------~~~~-~~~~~~~----------~v~~l~~s~d~~~l~~~~~dg~i~vwd~~~~~~ 573 (708)
.+.||+.+..|...||++. +... ....+.+ .-..+.|.++.+.|++++ ...+.++|+++...
T Consensus 158 ~~q~AiVD~~G~Wsvw~i~~~~~~~~~~~~~~~~~~gsi~~d~~e~s~w~rI~W~~~~~~lLv~~-r~~l~~~d~~~~~~ 236 (765)
T PF10214_consen 158 QRQFAIVDEKGNWSVWDIKGRPKRKSSNLRLSRNISGSIIFDPEELSNWKRILWVSDSNRLLVCN-RSKLMLIDFESNWQ 236 (765)
T ss_pred cceEEEEeccCcEEEEEeccccccCCcceeeccCCCccccCCCcccCcceeeEecCCCCEEEEEc-CCceEEEECCCCCc
Confidence 6789999999999999993 1111 1111112 223788988888888665 45699999998765
Q ss_pred CchhhhhhccCchhhhcCCCCeeEEEeCCCCC-ceEEEEcCeeEEEEecCCC
Q psy12614 574 TTFSRKLETNHPNEWLSRQLPVLGIEFDPQDS-SLIYLMDDSALCVINKNKS 624 (708)
Q Consensus 574 ~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~~~-~l~~~~~d~~i~~wd~~~~ 624 (708)
.+. -........|.++.-+++.. +++.. ....|...++...
T Consensus 237 ~~~---------l~~~~~~~~IlDv~~~~~~~~~~FiL-Ts~eiiw~~~~~~ 278 (765)
T PF10214_consen 237 TEY---------LVTAKTWSWILDVKRSPDNPSHVFIL-TSKEIIWLDVKSS 278 (765)
T ss_pred cch---------hccCCChhheeeEEecCCccceEEEE-ecCeEEEEEccCC
Confidence 310 01122445799999888743 33333 3456777787764
|
These proteins are found in fungi. |
| >COG3292 Predicted periplasmic ligand-binding sensor domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=84.84 E-value=53 Score=34.14 Aligned_cols=151 Identities=20% Similarity=0.184 Sum_probs=81.5
Q ss_pred CCcEEEEEEe-CCEEEEEcCCCcEEEEECCCCeEeEEEeecC-CceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEE
Q psy12614 71 SNSIECLTWF-NDRLFSGGLQGFVNEYDMRRLNIKSSTAVTS-GTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYE 148 (708)
Q Consensus 71 ~~~v~~l~~~-~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~-~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~ 148 (708)
..+|.++.+. .+.+..|+.|| +..+|..+++.++.-.... .+|.++..+-.|+ |.+|+.+| |++.+.++.+..-
T Consensus 164 d~~V~aLv~D~~g~lWvgT~dG-L~~fd~~~gkalql~s~~~dk~I~al~~d~qg~-LWVGTdqG-v~~~e~~G~~~sn- 239 (671)
T COG3292 164 DTPVVALVFDANGRLWVGTPDG-LSYFDAGRGKALQLASPPLDKAINALIADVQGR-LWVGTDQG-VYLQEAEGWRASN- 239 (671)
T ss_pred CccceeeeeeccCcEEEecCCc-ceEEccccceEEEcCCCcchhhHHHHHHHhcCc-EEEEeccc-eEEEchhhccccc-
Confidence 4678888998 77888888887 5667777777665544333 5666666666665 56667666 7777766633321
Q ss_pred EecccccccEEEEEECCCCCEEEEecCCeEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEEEEcCCCcEEE
Q psy12614 149 KLLDRQQGRILCTAWHSSGDYLVTGCAAAVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRF 228 (708)
Q Consensus 149 ~~~~~~~~~v~~~~~s~d~~~l~~~~~d~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~ 228 (708)
....-..+.|..+.=..+|. +-.|+.+.+.......+.........+ .....|.++....+|.+-+++.+|.+++
T Consensus 240 ~~~~lp~~~I~ll~qD~qG~-lWiGTenGl~r~~l~rq~Lq~~~~~~~----l~~S~vnsL~~D~dGsLWv~t~~giv~~ 314 (671)
T COG3292 240 WGPMLPSGNILLLVQDAQGE-LWIGTENGLWRTRLPRQGLQIPLSKMH----LGVSTVNSLWLDTDGSLWVGTYGGIVRY 314 (671)
T ss_pred cCCCCcchheeeeecccCCC-EEEeecccceeEecCCCCccccccccC----CccccccceeeccCCCEeeeccCceEEE
Confidence 01111133444444333443 333333322223333322221111110 1134456666666777777777776665
Q ss_pred Ee
Q psy12614 229 WD 230 (708)
Q Consensus 229 wd 230 (708)
-+
T Consensus 315 ~~ 316 (671)
T COG3292 315 LT 316 (671)
T ss_pred ec
Confidence 54
|
|
| >PRK13613 lipoprotein LpqB; Provisional | Back alignment and domain information |
|---|
Probab=83.40 E-value=71 Score=34.48 Aligned_cols=191 Identities=13% Similarity=0.011 Sum_probs=97.3
Q ss_pred ceEEEEeCCCCcEEEEEc-CC-ceEEEEEEecCC-cceeEEeecCCcccccceeEEEEEecCCCeEEEEec--CCc--EE
Q psy12614 405 TIRCSVVSNDGKYVAYST-ES-CVRLHSLDLDGD-KPQISRIKNLPAPLFKSIFTHVLISADSTLLLAVSL--NGP--LY 477 (708)
Q Consensus 405 ~i~~~~~s~~g~~l~~~~-d~-~i~i~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~~~~~--dg~--i~ 477 (708)
.+.++++++++..+|.-. ++ .+++..+..+.. ......+ +. ...++.-.|.++|- +=+... ++. ++
T Consensus 364 ~~~s~avS~~g~~~A~v~~~~~~l~vg~~~~~~~~~~~~~~~--~~----~~~Lt~PS~d~~g~-vWtvd~~~~~~~vl~ 436 (599)
T PRK13613 364 PLRRVAVSRDESRAAGISADGDSVYVGSLTPGASIGVHSWGV--TA----DGRLTSPSWDGRGD-LWVVDRDPADPRLLW 436 (599)
T ss_pred CccceEEcCCCceEEEEcCCCcEEEEeccCCCCcccccccee--ec----cCcccCCcCcCCCC-EEEecCCCCCceEEE
Confidence 577899999999988743 33 444444322111 0000000 11 11334467777773 333322 222 33
Q ss_pred EecCCCeEEEEEecCCCCCccCcceEEEEECCCCcEEEEEec---CCeEEEEECC---ceee------ecCCCCCCceEE
Q psy12614 478 IIDLSSLEIKYCVDPYKSNLMSDVISLVQMSECKQYIVCADR---KSHVVIWKNG---QHHA------SLPRYRKPSTAM 545 (708)
Q Consensus 478 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~---d~~i~iw~~~---~~~~------~~~~~~~~v~~l 545 (708)
-... .++.. .+... .. ....|+.+..|+||..+|.-.+ .+.|+|=-+. .... .+..-...+.++
T Consensus 437 v~~~-~G~~~-~V~~~-~l-~g~~I~~lrvSrDG~RvAvv~~~~g~~~v~va~V~R~~~G~~~l~~~~~l~~~l~~v~~~ 512 (599)
T PRK13613 437 LLQG-DGEPV-EVRTP-EL-DGHRVVAVRVARDGVRVALIVEKDGRRSLQIGRIVRDAKAVVSVEEFRSLAPELEDVTDM 512 (599)
T ss_pred EEcC-CCcEE-Eeecc-cc-CCCEeEEEEECCCccEEEEEEecCCCcEEEEEEEEeCCCCcEEeeccEEeccCCCcccee
Confidence 3322 22222 12222 21 0237999999999999887653 3566665554 1111 222223459999
Q ss_pred EEcCCCCEEEEEe-cCCcEEEEE--cCCCCCCchhhhhhccCchhhhcCCCCeeEEEeCCCCCceEEE-EcCeeEE
Q psy12614 546 AIHPTLSTLVTVY-SDHRIVEFD--LNRKAFTTFSRKLETNHPNEWLSRQLPVLGIEFDPQDSSLIYL-MDDSALC 617 (708)
Q Consensus 546 ~~s~d~~~l~~~~-~dg~i~vwd--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~~~~l~~~-~~d~~i~ 617 (708)
+|..++.+++.+. .++...+|- +...... ......-..+..|+-..+...++.+ ..++.|.
T Consensus 513 ~W~~~~sL~Vlg~~~~~~~~v~~v~vdG~~~~-----------~~~~~~v~~~~~ia~~~~~~~~~v~~~~~~~v~ 577 (599)
T PRK13613 513 SWAGDSQLVVLGREEGGVQQARYVQVDGSTPP-----------ASAPAAVTGVESITASEDERLPLVAGTSEDGIV 577 (599)
T ss_pred EEcCCCEEEEEeccCCCCcceEEEecCCcCcc-----------cccccCCCCeeEEEecCCCCceEEEEecCCCeE
Confidence 9998888766553 333444554 4433211 1112344566767777666534444 5555553
|
|
| >KOG1898|consensus | Back alignment and domain information |
|---|
Probab=83.20 E-value=86 Score=35.34 Aligned_cols=92 Identities=10% Similarity=0.038 Sum_probs=62.0
Q ss_pred cEEEEEEeCCEEEEEcCCCcEEEEECCCCeEeEEE---eecCCceEEEEEecCC------CEEEEEeCCCcEEEEEccCC
Q psy12614 73 SIECLTWFNDRLFSGGLQGFVNEYDMRRLNIKSST---AVTSGTCWCLSVHKKK------RLLAAGTEQGHINLFQISDE 143 (708)
Q Consensus 73 ~v~~l~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~---~~~~~~v~~~~~s~~~------~~la~~~~d~~i~iwd~~~~ 143 (708)
.|...+.+...++.+-..|.+..+.......+..+ ..-...|.|+++.++. ++++.++.|+.++++.+.-.
T Consensus 541 ~Iv~~avnr~qiVvalSngelvyfe~d~sgql~E~~er~tl~~~vac~ai~~~~~g~krsrfla~a~~d~~vriisL~p~ 620 (1205)
T KOG1898|consen 541 RIVKCAVNRRQIVVALSNGELVYFEGDVSGQLNEFTERVTLSTDVACLAIGQDPEGEKRSRFLALASVDNMVRIISLDPS 620 (1205)
T ss_pred EEEEEeecceEEEEEccCCeEEEEEeccCccceeeeeeeeeceeehhhccCCCCcchhhcceeeeeccccceeEEEecCc
Confidence 44455555667777777888777766543333333 2345678999998875 57999999999999999866
Q ss_pred cEEEEEecccccccEEEEEEC
Q psy12614 144 GLLYEKLLDRQQGRILCTAWH 164 (708)
Q Consensus 144 ~~~~~~~~~~~~~~v~~~~~s 164 (708)
..+......+-..++.++.+-
T Consensus 621 d~l~~ls~q~l~~~~~s~~iv 641 (1205)
T KOG1898|consen 621 DCLQPLSVQGLSSPPESLCIV 641 (1205)
T ss_pred ceEEEccccccCCCccceEEE
Confidence 665434455555666666653
|
|
| >PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates | Back alignment and domain information |
|---|
Probab=82.60 E-value=8 Score=41.57 Aligned_cols=74 Identities=18% Similarity=0.327 Sum_probs=46.9
Q ss_pred cCCCEEEEEeCCCcEEEEEccC----CcEEEEEeccc--------------------ccccEEEEEECC----CCCEEEE
Q psy12614 121 KKKRLLAAGTEQGHINLFQISD----EGLLYEKLLDR--------------------QQGRILCTAWHS----SGDYLVT 172 (708)
Q Consensus 121 ~~~~~la~~~~d~~i~iwd~~~----~~~~~~~~~~~--------------------~~~~v~~~~~s~----d~~~l~~ 172 (708)
++...++++..||.+....... +.......+.. ....+..++++. +..+|++
T Consensus 156 ~~~~~l~v~~~dG~ll~l~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~t 235 (547)
T PF11715_consen 156 DSEANLVVSLQDGGLLRLKRSSGDSDGSVWSEELFNDSSWLRSLSGLFPWSYRGDNSSSSVAASLAVSSSEINDDTFLFT 235 (547)
T ss_dssp -SSSBEEEEESSS-EEEEEES----SSS-EE----STHHHHHCCTTTS-TT---SSSS---EEEEEE-----ETTTEEEE
T ss_pred cCCCEEEEEECCCCeEEEECCcccCCCCeeEEEEeCCCchhhhhhCcCCcccccCCCCCCccceEEEecceeCCCCEEEE
Confidence 3667888889999988888764 22111111111 123456666766 7789999
Q ss_pred ecCC-eEEEEEcCCCceEEEEEe
Q psy12614 173 GCAA-AVRVWDIHKGHAIHKMSL 194 (708)
Q Consensus 173 ~~~d-~i~iwd~~~~~~~~~~~~ 194 (708)
.+.| .+++||+.+++++.....
T Consensus 236 l~~D~~LRiW~l~t~~~~~~~~~ 258 (547)
T PF11715_consen 236 LSRDHTLRIWSLETGQCLATIDL 258 (547)
T ss_dssp EETTSEEEEEETTTTCEEEEEET
T ss_pred EeCCCeEEEEECCCCeEEEEecc
Confidence 9999 999999999999887754
|
The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A. |
| >PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide | Back alignment and domain information |
|---|
Probab=82.50 E-value=5.5 Score=24.21 Aligned_cols=28 Identities=18% Similarity=0.324 Sum_probs=19.3
Q ss_pred CCCceEEEEeCCCCcEEEEE-c-C--CceEEE
Q psy12614 402 NNATIRCSVVSNDGKYVAYS-T-E--SCVRLH 429 (708)
Q Consensus 402 ~~~~i~~~~~s~~g~~l~~~-~-d--~~i~i~ 429 (708)
....-...+|||||+.|+.. . + |...||
T Consensus 7 ~~~~~~~p~~SpDGk~i~f~s~~~~~g~~diy 38 (39)
T PF07676_consen 7 SPGDDGSPAWSPDGKYIYFTSNRNDRGSFDIY 38 (39)
T ss_dssp SSSSEEEEEE-TTSSEEEEEEECT--SSEEEE
T ss_pred CCccccCEEEecCCCEEEEEecCCCCCCcCEE
Confidence 34556788999999999973 3 5 666555
|
WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A .... |
| >KOG4659|consensus | Back alignment and domain information |
|---|
Probab=82.33 E-value=1e+02 Score=35.68 Aligned_cols=29 Identities=17% Similarity=0.171 Sum_probs=18.0
Q ss_pred cCCCceEEEEeCCCCcEEEEEcCCceEEEE
Q psy12614 401 VNNATIRCSVVSNDGKYVAYSTESCVRLHS 430 (708)
Q Consensus 401 ~~~~~i~~~~~s~~g~~l~~~~d~~i~i~~ 430 (708)
.+-..+.++|++|||..+++ +.|.++|-.
T Consensus 659 A~lnsp~alaVsPdg~v~IA-D~gN~rIr~ 687 (1899)
T KOG4659|consen 659 AKLNSPYALAVSPDGDVIIA-DSGNSRIRK 687 (1899)
T ss_pred cccCCcceEEECCCCcEEEe-cCCchhhhh
Confidence 34456788999999975554 334444433
|
|
| >TIGR03032 conserved hypothetical protein TIGR03032 | Back alignment and domain information |
|---|
Probab=82.21 E-value=49 Score=31.76 Aligned_cols=84 Identities=18% Similarity=0.303 Sum_probs=61.7
Q ss_pred CCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC---------------------eEEE
Q psy12614 122 KKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA---------------------AVRV 180 (708)
Q Consensus 122 ~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d---------------------~i~i 180 (708)
+|++.++-+..|.+.-+|.++|+......+ .+....++|. |.+++++-.. .|.+
T Consensus 212 dgrLwvldsgtGev~~vD~~~G~~e~Va~v---pG~~rGL~f~--G~llvVgmSk~R~~~~f~glpl~~~l~~~~CGv~v 286 (335)
T TIGR03032 212 QGKLWLLNSGRGELGYVDPQAGKFQPVAFL---PGFTRGLAFA--GDFAFVGLSKLRESRVFGGLPIEERLDALGCGVAV 286 (335)
T ss_pred CCeEEEEECCCCEEEEEcCCCCcEEEEEEC---CCCCccccee--CCEEEEEeccccCCCCcCCCchhhhhhhhcccEEE
Confidence 566777777789999999888877644444 3456777887 7777655332 2788
Q ss_pred EEcCCCceEEEEEecccCCCCCceeEEEEEEccCC
Q psy12614 181 WDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADF 215 (708)
Q Consensus 181 wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 215 (708)
.|+++|..+..+... +.-..+.+++..|+-
T Consensus 287 idl~tG~vv~~l~fe-----g~v~EifdV~vLPg~ 316 (335)
T TIGR03032 287 IDLNSGDVVHWLRFE-----GVIEEIYDVAVLPGV 316 (335)
T ss_pred EECCCCCEEEEEEeC-----CceeEEEEEEEecCC
Confidence 899999999888876 446778888888875
|
This protein family is uncharacterized. A number of motifs are conserved perfectly among all member sequences. The function of this protein is unknown. |
| >PLN02153 epithiospecifier protein | Back alignment and domain information |
|---|
Probab=81.60 E-value=59 Score=32.34 Aligned_cols=110 Identities=10% Similarity=0.096 Sum_probs=54.4
Q ss_pred CCCEEEEEeCC-------CcEEEEeCCCCCeEEEEEecCCCCC---cEEEEEEeCCEEEEEcCC-----CcEEEEECCCC
Q psy12614 37 KSSRLAVSRAD-------QSIEIWDISETPHVDRVFIGDPLSN---SIECLTWFNDRLFSGGLQ-----GFVNEYDMRRL 101 (708)
Q Consensus 37 ~~~~la~~~~d-------g~v~iwd~~~~~~~~~~~~~h~~~~---~v~~l~~~~~~l~s~~~d-----~~i~vwd~~~~ 101 (708)
++++.+.|+.+ ..+.+||+.+.+-......+..... ....+++.+..++.|+.+ ..+.++|..+.
T Consensus 32 ~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~ 111 (341)
T PLN02153 32 GDKLYSFGGELKPNEHIDKDLYVFDFNTHTWSIAPANGDVPRISCLGVRMVAVGTKLYIFGGRDEKREFSDFYSYDTVKN 111 (341)
T ss_pred CCEEEEECCccCCCCceeCcEEEEECCCCEEEEcCccCCCCCCccCceEEEEECCEEEEECCCCCCCccCcEEEEECCCC
Confidence 35566666542 3588899887644321111111001 122222336666676653 35778888775
Q ss_pred eEe--EEEee---cCCceEEEEEecCCCEEEEEeCC-----------CcEEEEEccCCcEE
Q psy12614 102 NIK--SSTAV---TSGTCWCLSVHKKKRLLAAGTEQ-----------GHINLFQISDEGLL 146 (708)
Q Consensus 102 ~~~--~~~~~---~~~~v~~~~~s~~~~~la~~~~d-----------~~i~iwd~~~~~~~ 146 (708)
+-. ..+.. ........+..-+++.++.|+.+ ..+.+||..+.+..
T Consensus 112 ~W~~~~~~~~~~~p~~R~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~ 172 (341)
T PLN02153 112 EWTFLTKLDEEGGPEARTFHSMASDENHVYVFGGVSKGGLMKTPERFRTIEAYNIADGKWV 172 (341)
T ss_pred EEEEeccCCCCCCCCCceeeEEEEECCEEEEECCccCCCccCCCcccceEEEEECCCCeEe
Confidence 432 11110 11111222223355666776643 24778998887764
|
|
| >PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide | Back alignment and domain information |
|---|
Probab=81.51 E-value=6.2 Score=23.96 Aligned_cols=30 Identities=17% Similarity=0.249 Sum_probs=20.5
Q ss_pred CCCCcEEEEEEcCCCCEEEEEeC-C--CcEEEE
Q psy12614 24 PEPKVINCIACEPKSSRLAVSRA-D--QSIEIW 53 (708)
Q Consensus 24 ~h~~~v~~~~~s~~~~~la~~~~-d--g~v~iw 53 (708)
..++.-.+.+|||||++|+..+. + |.-.||
T Consensus 6 ~~~~~~~~p~~SpDGk~i~f~s~~~~~g~~diy 38 (39)
T PF07676_consen 6 NSPGDDGSPAWSPDGKYIYFTSNRNDRGSFDIY 38 (39)
T ss_dssp -SSSSEEEEEE-TTSSEEEEEEECT--SSEEEE
T ss_pred cCCccccCEEEecCCCEEEEEecCCCCCCcCEE
Confidence 34567788999999999887643 4 566655
|
WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A .... |
| >PLN02153 epithiospecifier protein | Back alignment and domain information |
|---|
Probab=81.34 E-value=60 Score=32.27 Aligned_cols=38 Identities=5% Similarity=-0.081 Sum_probs=20.9
Q ss_pred CeEEEEeCCCCceeecCc----cCCCCceEEEEcCCcEEEEE
Q psy12614 322 SYLSLSYYPPKTLVKYPC----TLAQSTPVSLAKDIQHVLLQ 359 (708)
Q Consensus 322 ~~i~iw~~~~~~~~~~~~----~~~~~~~~~~s~~~~~l~~~ 359 (708)
..+.+||..+.....+.. +.......+...++++++.+
T Consensus 217 ~~v~~yd~~~~~W~~~~~~g~~P~~r~~~~~~~~~~~iyv~G 258 (341)
T PLN02153 217 NAVQFFDPASGKWTEVETTGAKPSARSVFAHAVVGKYIIIFG 258 (341)
T ss_pred CceEEEEcCCCcEEeccccCCCCCCcceeeeEEECCEEEEEC
Confidence 457889988887665541 11222223344456666664
|
|
| >COG1520 FOG: WD40-like repeat [Function unknown] | Back alignment and domain information |
|---|
Probab=81.09 E-value=65 Score=32.50 Aligned_cols=187 Identities=12% Similarity=0.141 Sum_probs=108.3
Q ss_pred CCEEEEEcCCCcEEEEECCCCeEeEEEeecC--CceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccE
Q psy12614 81 NDRLFSGGLQGFVNEYDMRRLNIKSSTAVTS--GTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRI 158 (708)
Q Consensus 81 ~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~--~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v 158 (708)
+..++.+..+|.|.-.|.++++.+.....-. ..+..-.+..+|+ +.+++.++.++.+|..+|+.......... ..+
T Consensus 68 dg~v~~~~~~G~i~A~d~~~g~~~W~~~~~~~~~~~~~~~~~~~G~-i~~g~~~g~~y~ld~~~G~~~W~~~~~~~-~~~ 145 (370)
T COG1520 68 DGTVYVGTRDGNIFALNPDTGLVKWSYPLLGAVAQLSGPILGSDGK-IYVGSWDGKLYALDASTGTLVWSRNVGGS-PYY 145 (370)
T ss_pred CCeEEEecCCCcEEEEeCCCCcEEecccCcCcceeccCceEEeCCe-EEEecccceEEEEECCCCcEEEEEecCCC-eEE
Confidence 7777888899999999999988765433221 2333333334676 67778889999999988988865555441 112
Q ss_pred EEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEEEEcC--CCcEEEEeCCCCe
Q psy12614 159 LCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDS--GGFVRFWDGKTGV 235 (708)
Q Consensus 159 ~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~--dg~i~~wd~~~~~ 235 (708)
..-....++. +...+.+ .+...|..+|+.+........ . ...+..-....++.++.+.. ++.+.-.|..+|+
T Consensus 146 ~~~~v~~~~~-v~~~s~~g~~~al~~~tG~~~W~~~~~~~-~---~~~~~~~~~~~~~~vy~~~~~~~~~~~a~~~~~G~ 220 (370)
T COG1520 146 ASPPVVGDGT-VYVGTDDGHLYALNADTGTLKWTYETPAP-L---SLSIYGSPAIASGTVYVGSDGYDGILYALNAEDGT 220 (370)
T ss_pred ecCcEEcCcE-EEEecCCCeEEEEEccCCcEEEEEecCCc-c---ccccccCceeecceEEEecCCCcceEEEEEccCCc
Confidence 2222333443 3333355 888888888888777655310 0 11111111134556666666 6678888888887
Q ss_pred eEEEeecc----ccCe------EEEEEeCCCCEEEEEecCCeEEEEEccC
Q psy12614 236 QWSDVKTH----KKDI------LALTVSEDENYLYCAGVDPTVVCFQRTR 275 (708)
Q Consensus 236 ~~~~~~~~----~~~i------~~~~~s~~~~~l~~~~~dg~i~iw~~~~ 275 (708)
.....+.+ ...+ ..-...-++ .++.++.++.+...+..+
T Consensus 221 ~~w~~~~~~~~~~~~~~~~~~~~~~~v~v~~-~~~~~~~~g~~~~l~~~~ 269 (370)
T COG1520 221 LKWSQKVSQTIGRTAISTTPAVDGGPVYVDG-GVYAGSYGGKLLCLDADT 269 (370)
T ss_pred EeeeeeeecccCcccccccccccCceEEECC-cEEEEecCCeEEEEEcCC
Confidence 76653211 1111 000111122 235566677788888887
|
|
| >PF07250 Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterPro: IPR009880 This entry represents the N terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes | Back alignment and domain information |
|---|
Probab=80.99 E-value=47 Score=30.82 Aligned_cols=132 Identities=13% Similarity=0.170 Sum_probs=65.7
Q ss_pred CCceEEEEeCCCCcEEEEEc--C--CceEEEEEEecCCcceeEEeecCCcccc-cceeEEEEEecCCCeEEEEecCCcEE
Q psy12614 403 NATIRCSVVSNDGKYVAYST--E--SCVRLHSLDLDGDKPQISRIKNLPAPLF-KSIFTHVLISADSTLLLAVSLNGPLY 477 (708)
Q Consensus 403 ~~~i~~~~~s~~g~~l~~~~--d--~~i~i~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~s~d~~~l~~~~~dg~i~ 477 (708)
+....+-++-+||++|.+|. + ..+++++.........+.. ...... .+---....-|||+.|++|+.....|
T Consensus 66 d~FCSgg~~L~dG~ll~tGG~~~G~~~ir~~~p~~~~~~~~w~e---~~~~m~~~RWYpT~~~L~DG~vlIvGG~~~~t~ 142 (243)
T PF07250_consen 66 DTFCSGGAFLPDGRLLQTGGDNDGNKAIRIFTPCTSDGTCDWTE---SPNDMQSGRWYPTATTLPDGRVLIVGGSNNPTY 142 (243)
T ss_pred CCcccCcCCCCCCCEEEeCCCCccccceEEEecCCCCCCCCceE---CcccccCCCccccceECCCCCEEEEeCcCCCcc
Confidence 33344456789999999853 3 4577777543111112221 111111 11122255668999999998886533
Q ss_pred EecCC---C--eEEEEEecCCCCCccCcceEEEEECCCCcEEEEEecCCeEEEEECCc--eeeecCCCC
Q psy12614 478 IIDLS---S--LEIKYCVDPYKSNLMSDVISLVQMSECKQYIVCADRKSHVVIWKNGQ--HHASLPRYR 539 (708)
Q Consensus 478 ~~~~~---~--~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~--~~~~~~~~~ 539 (708)
.+-.. . ...+..+...........--.+...|||+.++.+..+. .|||..+ ....++.-.
T Consensus 143 E~~P~~~~~~~~~~~~~l~~~~~~~~~nlYP~~~llPdG~lFi~an~~s--~i~d~~~n~v~~~lP~lP 209 (243)
T PF07250_consen 143 EFWPPKGPGPGPVTLPFLSQTSDTLPNNLYPFVHLLPDGNLFIFANRGS--IIYDYKTNTVVRTLPDLP 209 (243)
T ss_pred cccCCccCCCCceeeecchhhhccCccccCceEEEcCCCCEEEEEcCCc--EEEeCCCCeEEeeCCCCC
Confidence 33111 1 11111111100000012223566789999999987654 4557663 334555433
|
Glyoxal oxidase catalyses the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium []. |
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 708 | ||||
| 4ggd_A | 431 | Structural Analysis Of Human Cdc20 Supports Multisi | 1e-04 | ||
| 4gga_A | 420 | Structural Analysis Of Human Cdc20 Supports Multi-S | 2e-04 | ||
| 1erj_A | 393 | Crystal Structure Of The C-Terminal Wd40 Domain Of | 2e-04 | ||
| 4ggc_A | 318 | Structural Analysis Of Human Cdc20 Supports Multi-S | 4e-04 |
| >pdb|4GGD|A Chain A, Structural Analysis Of Human Cdc20 Supports Multisite Degron Recognition By ApcC. Length = 431 | Back alignment and structure |
|
| >pdb|4GGA|A Chain A, Structural Analysis Of Human Cdc20 Supports Multi-Site Degron Recognition By ApcC Length = 420 | Back alignment and structure |
|
| >pdb|1ERJ|A Chain A, Crystal Structure Of The C-Terminal Wd40 Domain Of Tup1 Length = 393 | Back alignment and structure |
|
| >pdb|4GGC|A Chain A, Structural Analysis Of Human Cdc20 Supports Multi-Site Degron Recognition By ApcC Length = 318 | Back alignment and structure |
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 708 | |||
| 2ymu_A | 577 | WD-40 repeat protein; unknown function, two domain | 100.0 | |
| 1nr0_A | 611 | Actin interacting protein 1; beta propeller, WD40 | 100.0 | |
| 1nr0_A | 611 | Actin interacting protein 1; beta propeller, WD40 | 100.0 | |
| 2ymu_A | 577 | WD-40 repeat protein; unknown function, two domain | 100.0 | |
| 3sfz_A | 1249 | APAF-1, apoptotic peptidase activating factor 1; a | 100.0 | |
| 1pgu_A | 615 | Actin interacting protein 1; WD repeat, seven-blad | 100.0 | |
| 1pgu_A | 615 | Actin interacting protein 1; WD repeat, seven-blad | 100.0 | |
| 2oaj_A | 902 | Protein SNI1; WD40 repeat, beta propeller, endocyt | 100.0 | |
| 3sfz_A | 1249 | APAF-1, apoptotic peptidase activating factor 1; a | 100.0 | |
| 2oaj_A | 902 | Protein SNI1; WD40 repeat, beta propeller, endocyt | 100.0 | |
| 3mkq_A | 814 | Coatomer beta'-subunit; beta-propeller, alpha-sole | 100.0 | |
| 3mkq_A | 814 | Coatomer beta'-subunit; beta-propeller, alpha-sole | 100.0 | |
| 1vyh_C | 410 | Platelet-activating factor acetylhydrolase IB alph | 100.0 | |
| 3ow8_A | 321 | WD repeat-containing protein 61; structural genomi | 100.0 | |
| 2ynn_A | 304 | Coatomer subunit beta'; protein transport, peptide | 100.0 | |
| 1got_B | 340 | GT-beta; complex (GTP-binding/transducer), G prote | 100.0 | |
| 4gqb_B | 344 | Methylosome protein 50; TIM barrel, beta-propeller | 100.0 | |
| 2pbi_B | 354 | Guanine nucleotide-binding protein subunit beta 5; | 100.0 | |
| 3fm0_A | 345 | Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r | 100.0 | |
| 1vyh_C | 410 | Platelet-activating factor acetylhydrolase IB alph | 100.0 | |
| 4ery_A | 312 | WD repeat-containing protein 5; WD40, WIN motif, b | 100.0 | |
| 3ow8_A | 321 | WD repeat-containing protein 61; structural genomi | 100.0 | |
| 4g56_B | 357 | MGC81050 protein; protein arginine methyltransfera | 100.0 | |
| 3frx_A | 319 | Guanine nucleotide-binding protein subunit beta- l | 100.0 | |
| 3iz6_a | 380 | 40S ribosomal protein RACK1 (RACK1); eukaryotic ri | 100.0 | |
| 1erj_A | 393 | Transcriptional repressor TUP1; beta-propeller, tr | 100.0 | |
| 2xzm_R | 343 | RACK1; ribosome, translation; 3.93A {Tetrahymena t | 100.0 | |
| 1got_B | 340 | GT-beta; complex (GTP-binding/transducer), G prote | 100.0 | |
| 2hes_X | 330 | YDR267CP; beta-propeller, WD40 repeat, biosyntheti | 100.0 | |
| 3fm0_A | 345 | Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r | 100.0 | |
| 2ynn_A | 304 | Coatomer subunit beta'; protein transport, peptide | 100.0 | |
| 1gxr_A | 337 | ESG1, transducin-like enhancer protein 1; transcri | 100.0 | |
| 1r5m_A | 425 | SIR4-interacting protein SIF2; transcription corep | 100.0 | |
| 2pm9_A | 416 | Protein WEB1, protein transport protein SEC31; bet | 100.0 | |
| 2ovr_B | 445 | FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 | 100.0 | |
| 2hes_X | 330 | YDR267CP; beta-propeller, WD40 repeat, biosyntheti | 100.0 | |
| 2pbi_B | 354 | Guanine nucleotide-binding protein subunit beta 5; | 100.0 | |
| 3vl1_A | 420 | 26S proteasome regulatory subunit RPN14; beta-prop | 100.0 | |
| 1r5m_A | 425 | SIR4-interacting protein SIF2; transcription corep | 100.0 | |
| 3frx_A | 319 | Guanine nucleotide-binding protein subunit beta- l | 100.0 | |
| 4ery_A | 312 | WD repeat-containing protein 5; WD40, WIN motif, b | 100.0 | |
| 3iz6_a | 380 | 40S ribosomal protein RACK1 (RACK1); eukaryotic ri | 100.0 | |
| 2xzm_R | 343 | RACK1; ribosome, translation; 3.93A {Tetrahymena t | 100.0 | |
| 3v7d_B | 464 | Cell division control protein 4; WD 40 domain, pho | 100.0 | |
| 4g56_B | 357 | MGC81050 protein; protein arginine methyltransfera | 100.0 | |
| 4aow_A | 340 | Guanine nucleotide-binding protein subunit beta-2; | 100.0 | |
| 3zwl_B | 369 | Eukaryotic translation initiation factor 3 subuni; | 100.0 | |
| 1sq9_A | 397 | Antiviral protein SKI8; WD repeat, beta-transducin | 100.0 | |
| 1erj_A | 393 | Transcriptional repressor TUP1; beta-propeller, tr | 100.0 | |
| 4aow_A | 340 | Guanine nucleotide-binding protein subunit beta-2; | 100.0 | |
| 4gqb_B | 344 | Methylosome protein 50; TIM barrel, beta-propeller | 100.0 | |
| 1gxr_A | 337 | ESG1, transducin-like enhancer protein 1; transcri | 100.0 | |
| 1k8k_C | 372 | P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta- | 100.0 | |
| 3odt_A | 313 | Protein DOA1; ubiquitin, nuclear protein; HET: MSE | 100.0 | |
| 3dm0_A | 694 | Maltose-binding periplasmic protein fused with RAC | 100.0 | |
| 2ovr_B | 445 | FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 | 100.0 | |
| 3v7d_B | 464 | Cell division control protein 4; WD 40 domain, pho | 100.0 | |
| 2pm9_A | 416 | Protein WEB1, protein transport protein SEC31; bet | 100.0 | |
| 3ei3_B | 383 | DNA damage-binding protein 2; UV-damage, DDB, nucl | 100.0 | |
| 2j04_B | 524 | YDR362CP, TAU91; beta propeller, type 2 promoters, | 100.0 | |
| 2pm7_B | 297 | Protein transport protein SEC13, protein transport | 100.0 | |
| 1k32_A | 1045 | Tricorn protease; protein degradation, substrate g | 100.0 | |
| 3gre_A | 437 | Serine/threonine-protein kinase VPS15; seven-blade | 100.0 | |
| 4h5i_A | 365 | Guanine nucleotide-exchange factor SEC12; copii ve | 100.0 | |
| 3i2n_A | 357 | WD repeat-containing protein 92; WD40 repeats, str | 100.0 | |
| 3k26_A | 366 | Polycomb protein EED; WD40, structural genomics, N | 100.0 | |
| 3dwl_C | 377 | Actin-related protein 2/3 complex subunit 1; prope | 100.0 | |
| 2j04_A | 588 | TAU60, YPL007P, hypothetical protein YPL007C; beta | 100.0 | |
| 3vl1_A | 420 | 26S proteasome regulatory subunit RPN14; beta-prop | 100.0 | |
| 4e54_B | 435 | DNA damage-binding protein 2; beta barrel, double | 100.0 | |
| 3dm0_A | 694 | Maltose-binding periplasmic protein fused with RAC | 100.0 | |
| 1p22_A | 435 | F-BOX/WD-repeat protein 1A; ubiquitination, degrad | 100.0 | |
| 1sq9_A | 397 | Antiviral protein SKI8; WD repeat, beta-transducin | 100.0 | |
| 3bg1_A | 316 | Protein SEC13 homolog; NPC, transport, WD repeat, | 100.0 | |
| 4aez_A | 401 | CDC20, WD repeat-containing protein SLP1; cell cyc | 100.0 | |
| 4h5i_A | 365 | Guanine nucleotide-exchange factor SEC12; copii ve | 100.0 | |
| 2j04_B | 524 | YDR362CP, TAU91; beta propeller, type 2 promoters, | 100.0 | |
| 3zwl_B | 369 | Eukaryotic translation initiation factor 3 subuni; | 100.0 | |
| 1k32_A | 1045 | Tricorn protease; protein degradation, substrate g | 100.0 | |
| 3odt_A | 313 | Protein DOA1; ubiquitin, nuclear protein; HET: MSE | 100.0 | |
| 1k8k_C | 372 | P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta- | 100.0 | |
| 4ggc_A | 318 | P55CDC, cell division cycle protein 20 homolog; ce | 100.0 | |
| 3jrp_A | 379 | Fusion protein of protein transport protein SEC13 | 100.0 | |
| 3gre_A | 437 | Serine/threonine-protein kinase VPS15; seven-blade | 100.0 | |
| 1yfq_A | 342 | Cell cycle arrest protein BUB3; WD repeat WD40 rep | 100.0 | |
| 4a11_B | 408 | DNA excision repair protein ERCC-8; DNA binding pr | 100.0 | |
| 4gga_A | 420 | P55CDC, cell division cycle protein 20 homolog; ce | 100.0 | |
| 3ei3_B | 383 | DNA damage-binding protein 2; UV-damage, DDB, nucl | 100.0 | |
| 3dwl_C | 377 | Actin-related protein 2/3 complex subunit 1; prope | 100.0 | |
| 3f3f_A | 351 | Nucleoporin SEH1; structural protein, protein comp | 100.0 | |
| 3i2n_A | 357 | WD repeat-containing protein 92; WD40 repeats, str | 100.0 | |
| 4e54_B | 435 | DNA damage-binding protein 2; beta barrel, double | 100.0 | |
| 2j04_A | 588 | TAU60, YPL007P, hypothetical protein YPL007C; beta | 100.0 | |
| 3k26_A | 366 | Polycomb protein EED; WD40, structural genomics, N | 100.0 | |
| 2pm7_B | 297 | Protein transport protein SEC13, protein transport | 100.0 | |
| 3dw8_B | 447 | Serine/threonine-protein phosphatase 2A 55 kDa RE | 100.0 | |
| 3mmy_A | 368 | MRNA export factor; mRNA export, nuclear protein; | 100.0 | |
| 4aez_A | 401 | CDC20, WD repeat-containing protein SLP1; cell cyc | 100.0 | |
| 3bg1_A | 316 | Protein SEC13 homolog; NPC, transport, WD repeat, | 100.0 | |
| 4gga_A | 420 | P55CDC, cell division cycle protein 20 homolog; ce | 100.0 | |
| 1p22_A | 435 | F-BOX/WD-repeat protein 1A; ubiquitination, degrad | 100.0 | |
| 4a11_B | 408 | DNA excision repair protein ERCC-8; DNA binding pr | 100.0 | |
| 4ggc_A | 318 | P55CDC, cell division cycle protein 20 homolog; ce | 100.0 | |
| 3dw8_B | 447 | Serine/threonine-protein phosphatase 2A 55 kDa RE | 100.0 | |
| 3jro_A | 753 | Fusion protein of protein transport protein SEC13 | 100.0 | |
| 2aq5_A | 402 | Coronin-1A; WD40 repeat, 7-bladed beta-propeller, | 100.0 | |
| 2vdu_B | 450 | TRNA (guanine-N(7)-)-methyltransferase- associated | 100.0 | |
| 3f3f_A | 351 | Nucleoporin SEH1; structural protein, protein comp | 100.0 | |
| 3jrp_A | 379 | Fusion protein of protein transport protein SEC13 | 100.0 | |
| 1yfq_A | 342 | Cell cycle arrest protein BUB3; WD repeat WD40 rep | 100.0 | |
| 2aq5_A | 402 | Coronin-1A; WD40 repeat, 7-bladed beta-propeller, | 99.98 | |
| 3mmy_A | 368 | MRNA export factor; mRNA export, nuclear protein; | 99.98 | |
| 1l0q_A | 391 | Surface layer protein; SLP, S-layer, 7-bladed beta | 99.98 | |
| 2xyi_A | 430 | Probable histone-binding protein CAF1; transcripti | 99.98 | |
| 3vu4_A | 355 | KMHSV2; beta-propeller fold, protein transport; 2. | 99.97 | |
| 3bws_A | 433 | Protein LP49; two-domain, immunoglobulin-like, 7-b | 99.97 | |
| 3vu4_A | 355 | KMHSV2; beta-propeller fold, protein transport; 2. | 99.97 | |
| 3lrv_A | 343 | PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu | 99.97 | |
| 2xyi_A | 430 | Probable histone-binding protein CAF1; transcripti | 99.97 | |
| 3bws_A | 433 | Protein LP49; two-domain, immunoglobulin-like, 7-b | 99.97 | |
| 2vdu_B | 450 | TRNA (guanine-N(7)-)-methyltransferase- associated | 99.97 | |
| 1l0q_A | 391 | Surface layer protein; SLP, S-layer, 7-bladed beta | 99.97 | |
| 3jro_A | 753 | Fusion protein of protein transport protein SEC13 | 99.97 | |
| 2w18_A | 356 | PALB2, fancn, partner and localizer of BRCA2; fanc | 99.97 | |
| 4gq1_A | 393 | NUP37; propeller, transport protein; 2.40A {Schizo | 99.97 | |
| 4gq1_A | 393 | NUP37; propeller, transport protein; 2.40A {Schizo | 99.96 | |
| 2w18_A | 356 | PALB2, fancn, partner and localizer of BRCA2; fanc | 99.96 | |
| 3lrv_A | 343 | PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu | 99.96 | |
| 2hqs_A | 415 | Protein TOLB; TOLB, PAL, TOL, transport protein-li | 99.96 | |
| 1nir_A | 543 | Nitrite reductase; hemoprotein, denitrification, d | 99.95 | |
| 1nir_A | 543 | Nitrite reductase; hemoprotein, denitrification, d | 99.95 | |
| 2hqs_A | 415 | Protein TOLB; TOLB, PAL, TOL, transport protein-li | 99.95 | |
| 2ecf_A | 741 | Dipeptidyl peptidase IV; prolyl oligopeptidase fam | 99.94 | |
| 2ecf_A | 741 | Dipeptidyl peptidase IV; prolyl oligopeptidase fam | 99.93 | |
| 1xfd_A | 723 | DIP, dipeptidyl aminopeptidase-like protein 6, dip | 99.93 | |
| 2z3z_A | 706 | Dipeptidyl aminopeptidase IV; peptidase family S9, | 99.93 | |
| 2z3z_A | 706 | Dipeptidyl aminopeptidase IV; peptidase family S9, | 99.93 | |
| 3u4y_A | 331 | Uncharacterized protein; structural genomics, PSI- | 99.92 | |
| 1xfd_A | 723 | DIP, dipeptidyl aminopeptidase-like protein 6, dip | 99.92 | |
| 3vgz_A | 353 | Uncharacterized protein YNCE; beta-propeller, prot | 99.91 | |
| 1ri6_A | 343 | Putative isomerase YBHE; 7-bladed propeller, enzym | 99.91 | |
| 3u4y_A | 331 | Uncharacterized protein; structural genomics, PSI- | 99.9 | |
| 1ri6_A | 343 | Putative isomerase YBHE; 7-bladed propeller, enzym | 99.9 | |
| 2ojh_A | 297 | Uncharacterized protein ATU1656/AGR_C_3050; TOLB, | 99.89 | |
| 1pby_B | 337 | Quinohemoprotein amine dehydrogenase 40 kDa subuni | 99.88 | |
| 2ojh_A | 297 | Uncharacterized protein ATU1656/AGR_C_3050; TOLB, | 99.88 | |
| 3vgz_A | 353 | Uncharacterized protein YNCE; beta-propeller, prot | 99.88 | |
| 1z68_A | 719 | Fibroblast activation protein, alpha subunit; sepr | 99.88 | |
| 1pby_B | 337 | Quinohemoprotein amine dehydrogenase 40 kDa subuni | 99.88 | |
| 3hfq_A | 347 | Uncharacterized protein LP_2219; Q88V64_lacpl, NES | 99.87 | |
| 1z68_A | 719 | Fibroblast activation protein, alpha subunit; sepr | 99.87 | |
| 3hfq_A | 347 | Uncharacterized protein LP_2219; Q88V64_lacpl, NES | 99.87 | |
| 3scy_A | 361 | Hypothetical bacterial 6-phosphogluconolactonase; | 99.87 | |
| 3o4h_A | 582 | Acylamino-acid-releasing enzyme; alpha/beta hydrol | 99.87 | |
| 1jmx_B | 349 | Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; | 99.86 | |
| 2oit_A | 434 | Nucleoporin 214KDA; NH2 terminal domain of NUP214/ | 99.86 | |
| 4a5s_A | 740 | Dipeptidyl peptidase 4 soluble form; hydrolase, ty | 99.86 | |
| 3scy_A | 361 | Hypothetical bacterial 6-phosphogluconolactonase; | 99.86 | |
| 3pe7_A | 388 | Oligogalacturonate lyase; seven-bladed beta-propel | 99.85 | |
| 3pe7_A | 388 | Oligogalacturonate lyase; seven-bladed beta-propel | 99.83 | |
| 3o4h_A | 582 | Acylamino-acid-releasing enzyme; alpha/beta hydrol | 99.83 | |
| 1jof_A | 365 | Carboxy-CIS,CIS-muconate cyclase; beta-propeller, | 99.83 | |
| 2oit_A | 434 | Nucleoporin 214KDA; NH2 terminal domain of NUP214/ | 99.82 | |
| 4a5s_A | 740 | Dipeptidyl peptidase 4 soluble form; hydrolase, ty | 99.82 | |
| 1jmx_B | 349 | Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; | 99.81 | |
| 3azo_A | 662 | Aminopeptidase; POP family, hydrolase; 2.00A {Stre | 99.8 | |
| 3fvz_A | 329 | Peptidyl-glycine alpha-amidating monooxygenase; be | 99.8 | |
| 1q7f_A | 286 | NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL | 99.78 | |
| 1jof_A | 365 | Carboxy-CIS,CIS-muconate cyclase; beta-propeller, | 99.78 | |
| 2oiz_A | 361 | Aromatic amine dehydrogenase, large subunit; oxido | 99.77 | |
| 3c5m_A | 396 | Oligogalacturonate lyase; blade-shaped beta-propel | 99.76 | |
| 3azo_A | 662 | Aminopeptidase; POP family, hydrolase; 2.00A {Stre | 99.75 | |
| 2oiz_A | 361 | Aromatic amine dehydrogenase, large subunit; oxido | 99.75 | |
| 3c5m_A | 396 | Oligogalacturonate lyase; blade-shaped beta-propel | 99.75 | |
| 4a2l_A | 795 | BT_4663, two-component system sensor histidine kin | 99.74 | |
| 1qks_A | 567 | Cytochrome CD1 nitrite reductase; enzyme, oxidored | 99.73 | |
| 3e5z_A | 296 | Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco | 99.73 | |
| 4a2l_A | 795 | BT_4663, two-component system sensor histidine kin | 99.72 | |
| 2dg1_A | 333 | DRP35, lactonase; beta propeller, hydrolase; 1.72A | 99.71 | |
| 2z2n_A | 299 | Virginiamycin B lyase; seven-bladed beta-propeller | 99.71 | |
| 2dg1_A | 333 | DRP35, lactonase; beta propeller, hydrolase; 1.72A | 99.71 | |
| 2gop_A | 347 | Trilobed protease; beta propeller, open velcro, hy | 99.71 | |
| 1qks_A | 567 | Cytochrome CD1 nitrite reductase; enzyme, oxidored | 99.7 | |
| 3fvz_A | 329 | Peptidyl-glycine alpha-amidating monooxygenase; be | 99.69 | |
| 3v9f_A | 781 | Two-component system sensor histidine kinase/RESP | 99.69 | |
| 1q7f_A | 286 | NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL | 99.68 | |
| 2xdw_A | 710 | Prolyl endopeptidase; alpha/beta-hydrolase, amnesi | 99.68 | |
| 3dsm_A | 328 | Uncharacterized protein bacuni_02894; seven_blated | 99.67 | |
| 2gop_A | 347 | Trilobed protease; beta propeller, open velcro, hy | 99.66 | |
| 3e5z_A | 296 | Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco | 99.66 | |
| 2z2n_A | 299 | Virginiamycin B lyase; seven-bladed beta-propeller | 99.64 | |
| 2bkl_A | 695 | Prolyl endopeptidase; mechanistic study, celiac sp | 99.64 | |
| 3v9f_A | 781 | Two-component system sensor histidine kinase/RESP | 99.64 | |
| 1rwi_B | 270 | Serine/threonine-protein kinase PKND; beta propell | 99.64 | |
| 3no2_A | 276 | Uncharacterized protein; six-bladed beta-propeller | 99.63 | |
| 2xdw_A | 710 | Prolyl endopeptidase; alpha/beta-hydrolase, amnesi | 99.62 | |
| 2qc5_A | 300 | Streptogramin B lactonase; beta propeller, lyase; | 99.61 | |
| 3no2_A | 276 | Uncharacterized protein; six-bladed beta-propeller | 99.6 | |
| 3sjl_D | 386 | Methylamine dehydrogenase heavy chain; MAUG, C-hem | 99.58 | |
| 3sjl_D | 386 | Methylamine dehydrogenase heavy chain; MAUG, C-hem | 99.58 | |
| 1pjx_A | 314 | Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries | 99.57 | |
| 2bkl_A | 695 | Prolyl endopeptidase; mechanistic study, celiac sp | 99.57 | |
| 3dsm_A | 328 | Uncharacterized protein bacuni_02894; seven_blated | 99.56 | |
| 1rwi_B | 270 | Serine/threonine-protein kinase PKND; beta propell | 99.54 | |
| 2mad_H | 373 | Methylamine dehydrogenase (heavy subunit); oxidore | 99.52 | |
| 2qc5_A | 300 | Streptogramin B lactonase; beta propeller, lyase; | 99.52 | |
| 1yr2_A | 741 | Prolyl oligopeptidase; prolyl endopeptidase, mecha | 99.52 | |
| 3q7m_A | 376 | Lipoprotein YFGL, BAMB; beta-propeller, BAM comple | 99.5 | |
| 2mad_H | 373 | Methylamine dehydrogenase (heavy subunit); oxidore | 99.5 | |
| 3g4e_A | 297 | Regucalcin; six bladed beta-propeller, gluconolcat | 99.49 | |
| 3c75_H | 426 | MADH, methylamine dehydrogenase heavy chain; coppe | 99.46 | |
| 1yr2_A | 741 | Prolyl oligopeptidase; prolyl endopeptidase, mecha | 99.46 | |
| 3hrp_A | 409 | Uncharacterized protein; NP_812590.1, structural g | 99.46 | |
| 2ghs_A | 326 | AGR_C_1268P; regucalcin, structural genomics, join | 99.45 | |
| 3q7m_A | 376 | Lipoprotein YFGL, BAMB; beta-propeller, BAM comple | 99.44 | |
| 1xip_A | 388 | Nucleoporin NUP159; beta-propeller, transport prot | 99.44 | |
| 3dr2_A | 305 | Exported gluconolactonase; gluconolactonase SMP-30 | 99.43 | |
| 1pjx_A | 314 | Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries | 99.42 | |
| 3hrp_A | 409 | Uncharacterized protein; NP_812590.1, structural g | 99.42 | |
| 3g4e_A | 297 | Regucalcin; six bladed beta-propeller, gluconolcat | 99.41 | |
| 1yiq_A | 689 | Quinohemoprotein alcohol dehydrogenase; electron t | 99.38 | |
| 3iuj_A | 693 | Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas | 99.38 | |
| 3c75_H | 426 | MADH, methylamine dehydrogenase heavy chain; coppe | 99.38 | |
| 3hxj_A | 330 | Pyrrolo-quinoline quinone; all beta protein. incom | 99.38 | |
| 3hxj_A | 330 | Pyrrolo-quinoline quinone; all beta protein. incom | 99.37 | |
| 3dr2_A | 305 | Exported gluconolactonase; gluconolactonase SMP-30 | 99.35 | |
| 1xip_A | 388 | Nucleoporin NUP159; beta-propeller, transport prot | 99.35 | |
| 1kb0_A | 677 | Quinohemoprotein alcohol dehydrogenase; beta-prope | 99.33 | |
| 2ghs_A | 326 | AGR_C_1268P; regucalcin, structural genomics, join | 99.3 | |
| 1mda_H | 368 | Methylamine dehydrogenase (heavy subunit); electro | 99.27 | |
| 1yiq_A | 689 | Quinohemoprotein alcohol dehydrogenase; electron t | 99.23 | |
| 2qe8_A | 343 | Uncharacterized protein; structural genomics, join | 99.23 | |
| 1kb0_A | 677 | Quinohemoprotein alcohol dehydrogenase; beta-prope | 99.21 | |
| 3iuj_A | 693 | Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas | 99.2 | |
| 2hz6_A | 369 | Endoplasmic reticulum to nucleus signalling 1 isof | 99.17 | |
| 2qe8_A | 343 | Uncharacterized protein; structural genomics, join | 99.17 | |
| 2iwa_A | 266 | Glutamine cyclotransferase; pyroglutamate, acyltra | 99.16 | |
| 2ece_A | 462 | 462AA long hypothetical selenium-binding protein; | 99.16 | |
| 1kv9_A | 668 | Type II quinohemoprotein alcohol dehydrogenase; el | 99.15 | |
| 4a0p_A | 628 | LRP6, LRP-6, low-density lipoprotein receptor-rela | 99.12 | |
| 3s94_A | 619 | LRP-6, low-density lipoprotein receptor-related pr | 99.11 | |
| 3s94_A | 619 | LRP-6, low-density lipoprotein receptor-related pr | 99.09 | |
| 2ece_A | 462 | 462AA long hypothetical selenium-binding protein; | 99.09 | |
| 1npe_A | 267 | Nidogen, entactin; glycoprotein, basement membrane | 99.07 | |
| 1mda_H | 368 | Methylamine dehydrogenase (heavy subunit); electro | 99.07 | |
| 2ad6_A | 571 | Methanol dehydrogenase subunit 1; PQQ configuratio | 99.06 | |
| 2hz6_A | 369 | Endoplasmic reticulum to nucleus signalling 1 isof | 99.03 | |
| 3ott_A | 758 | Two-component system sensor histidine kinase; beta | 99.01 | |
| 1fwx_A | 595 | Nitrous oxide reductase; beta-propeller domain, cu | 98.99 | |
| 1npe_A | 267 | Nidogen, entactin; glycoprotein, basement membrane | 98.97 | |
| 3nol_A | 262 | Glutamine cyclotransferase; beta-propeller, glutam | 98.96 | |
| 3nok_A | 268 | Glutaminyl cyclase; beta-propeller, cyclotransfera | 98.94 | |
| 3nol_A | 262 | Glutamine cyclotransferase; beta-propeller, glutam | 98.94 | |
| 3ott_A | 758 | Two-component system sensor histidine kinase; beta | 98.93 | |
| 1flg_A | 582 | Protein (quinoprotein ethanol dehydrogenase); supe | 98.93 | |
| 3nok_A | 268 | Glutaminyl cyclase; beta-propeller, cyclotransfera | 98.92 | |
| 2iwa_A | 266 | Glutamine cyclotransferase; pyroglutamate, acyltra | 98.92 | |
| 1fwx_A | 595 | Nitrous oxide reductase; beta-propeller domain, cu | 98.9 | |
| 2fp8_A | 322 | Strictosidine synthase; six bladed beta propeller | 98.9 | |
| 3ei3_A | 1158 | DNA damage-binding protein 1; UV-damage, DDB, nucl | 98.9 | |
| 4a0p_A | 628 | LRP6, LRP-6, low-density lipoprotein receptor-rela | 98.89 | |
| 1w6s_A | 599 | Methanol dehydrogenase subunit 1; anisotropic, ele | 98.87 | |
| 1kv9_A | 668 | Type II quinohemoprotein alcohol dehydrogenase; el | 98.87 | |
| 3mbr_X | 243 | Glutamine cyclotransferase; beta-propeller; 1.44A | 98.82 | |
| 2ad6_A | 571 | Methanol dehydrogenase subunit 1; PQQ configuratio | 98.82 | |
| 3mbr_X | 243 | Glutamine cyclotransferase; beta-propeller; 1.44A | 98.8 | |
| 1w6s_A | 599 | Methanol dehydrogenase subunit 1; anisotropic, ele | 98.79 | |
| 2xbg_A | 327 | YCF48-like protein; photosynthesis, photosystem II | 98.76 | |
| 2fp8_A | 322 | Strictosidine synthase; six bladed beta propeller | 98.73 | |
| 2p4o_A | 306 | Hypothetical protein; putative lactonase, structur | 98.71 | |
| 3qqz_A | 255 | Putative uncharacterized protein YJIK; MCSG, PSI-2 | 98.68 | |
| 1flg_A | 582 | Protein (quinoprotein ethanol dehydrogenase); supe | 98.66 | |
| 3ei3_A | 1158 | DNA damage-binding protein 1; UV-damage, DDB, nucl | 98.63 | |
| 3qqz_A | 255 | Putative uncharacterized protein YJIK; MCSG, PSI-2 | 98.62 | |
| 3v65_B | 386 | Low-density lipoprotein receptor-related protein; | 98.54 | |
| 3v64_C | 349 | Agrin; beta propeller, laminin-G, signaling, prote | 98.53 | |
| 2p4o_A | 306 | Hypothetical protein; putative lactonase, structur | 98.52 | |
| 1ijq_A | 316 | LDL receptor, low-density lipoprotein receptor; be | 98.51 | |
| 3v64_C | 349 | Agrin; beta propeller, laminin-G, signaling, prote | 98.49 | |
| 3p5b_L | 400 | Low density lipoprotein receptor variant; B-propel | 98.46 | |
| 3tc9_A | 430 | Hypothetical hydrolase; 6-bladed beta-propeller, i | 98.44 | |
| 1k3i_A | 656 | Galactose oxidase precursor; blade beta propeller, | 98.41 | |
| 4hw6_A | 433 | Hypothetical protein, IPT/TIG domain protein; puta | 98.41 | |
| 3sov_A | 318 | LRP-6, low-density lipoprotein receptor-related pr | 98.4 | |
| 3v65_B | 386 | Low-density lipoprotein receptor-related protein; | 98.4 | |
| 2xe4_A | 751 | Oligopeptidase B; hydrolase-inhibitor complex, hyd | 98.39 | |
| 3tc9_A | 430 | Hypothetical hydrolase; 6-bladed beta-propeller, i | 98.36 | |
| 1k3i_A | 656 | Galactose oxidase precursor; blade beta propeller, | 98.34 | |
| 2xbg_A | 327 | YCF48-like protein; photosynthesis, photosystem II | 98.32 | |
| 1ijq_A | 316 | LDL receptor, low-density lipoprotein receptor; be | 98.32 | |
| 4hw6_A | 433 | Hypothetical protein, IPT/TIG domain protein; puta | 98.29 | |
| 3p5b_L | 400 | Low density lipoprotein receptor variant; B-propel | 98.25 | |
| 2xzh_A | 365 | Clathrin heavy chain 1; endocytosis, endocytosis i | 98.24 | |
| 2xe4_A | 751 | Oligopeptidase B; hydrolase-inhibitor complex, hyd | 98.23 | |
| 3sov_A | 318 | LRP-6, low-density lipoprotein receptor-related pr | 98.21 | |
| 3m0c_C | 791 | LDL receptor, low-density lipoprotein receptor; pr | 98.14 | |
| 3kya_A | 496 | Putative phosphatase; structural genomics, joint c | 98.09 | |
| 1bpo_A | 494 | Protein (clathrin); clathrin endocytosis beta-prop | 98.06 | |
| 3m0c_C | 791 | LDL receptor, low-density lipoprotein receptor; pr | 98.01 | |
| 1n7d_A | 699 | LDL receptor, low-density lipoprotein receptor; fa | 97.93 | |
| 2p9w_A | 334 | MAL S 1 allergenic protein; beta propeller; 1.35A | 97.89 | |
| 3kya_A | 496 | Putative phosphatase; structural genomics, joint c | 97.88 | |
| 3amr_A | 355 | 3-phytase; beta-propeller, phytate, MYO-inositol h | 97.88 | |
| 2ism_A | 352 | Putative oxidoreductase; BL41XU spring-8, bladed b | 97.78 | |
| 3sre_A | 355 | PON1, serum paraoxonase; directed evolution, 6-bla | 97.76 | |
| 2vpj_A | 301 | Kelch-like protein 12; adaptor protein, WNT signal | 97.73 | |
| 2vpj_A | 301 | Kelch-like protein 12; adaptor protein, WNT signal | 97.72 | |
| 3sre_A | 355 | PON1, serum paraoxonase; directed evolution, 6-bla | 97.71 | |
| 3amr_A | 355 | 3-phytase; beta-propeller, phytate, MYO-inositol h | 97.7 | |
| 3ii7_A | 306 | Kelch-like protein 7; protein-binding, kelch-repea | 97.63 | |
| 2ism_A | 352 | Putative oxidoreductase; BL41XU spring-8, bladed b | 97.62 | |
| 3ii7_A | 306 | Kelch-like protein 7; protein-binding, kelch-repea | 97.58 | |
| 2p9w_A | 334 | MAL S 1 allergenic protein; beta propeller; 1.35A | 97.57 | |
| 2xzh_A | 365 | Clathrin heavy chain 1; endocytosis, endocytosis i | 97.57 | |
| 2xn4_A | 302 | Kelch-like protein 2; structural protein, cytoskel | 97.55 | |
| 2xn4_A | 302 | Kelch-like protein 2; structural protein, cytoskel | 97.41 | |
| 4asc_A | 315 | Kelch repeat and BTB domain-containing protein 5; | 97.37 | |
| 2g8s_A | 353 | Glucose/sorbosone dehydrogenases; bladed beta-prop | 97.37 | |
| 1n7d_A | 699 | LDL receptor, low-density lipoprotein receptor; fa | 97.37 | |
| 1zgk_A | 308 | Kelch-like ECH-associated protein 1; beta-propelle | 97.3 | |
| 1zgk_A | 308 | Kelch-like ECH-associated protein 1; beta-propelle | 97.25 | |
| 1bpo_A | 494 | Protein (clathrin); clathrin endocytosis beta-prop | 97.22 | |
| 4asc_A | 315 | Kelch repeat and BTB domain-containing protein 5; | 97.18 | |
| 3a9g_A | 354 | Putative uncharacterized protein; PQQ dependent de | 97.12 | |
| 3pbp_A | 452 | Nucleoporin NUP82; beta-propeller, mRNA export, mR | 97.09 | |
| 2woz_A | 318 | Kelch repeat and BTB domain-containing protein 10; | 97.04 | |
| 3pbp_A | 452 | Nucleoporin NUP82; beta-propeller, mRNA export, mR | 97.03 | |
| 2g8s_A | 353 | Glucose/sorbosone dehydrogenases; bladed beta-prop | 96.99 | |
| 1tl2_A | 236 | L10, protein (tachylectin-2); animal lectin, horse | 96.96 | |
| 2woz_A | 318 | Kelch repeat and BTB domain-containing protein 10; | 96.84 | |
| 3das_A | 347 | Putative oxidoreductase; aldose sugar dehydrogenas | 96.83 | |
| 1xi4_A | 1630 | Clathrin heavy chain; alpha-ZIG-ZAG, beta-propelle | 96.78 | |
| 3das_A | 347 | Putative oxidoreductase; aldose sugar dehydrogenas | 96.78 | |
| 2be1_A | 339 | Serine/threonine-protein kinase/endoribonuclease; | 96.63 | |
| 3a9g_A | 354 | Putative uncharacterized protein; PQQ dependent de | 96.5 | |
| 1tl2_A | 236 | L10, protein (tachylectin-2); animal lectin, horse | 96.44 | |
| 1cru_A | 454 | Protein (soluble quinoprotein glucose dehydrogena; | 96.41 | |
| 2uvk_A | 357 | YJHT; unknown function, hypothetical protein, sial | 96.19 | |
| 2uvk_A | 357 | YJHT; unknown function, hypothetical protein, sial | 96.13 | |
| 3s25_A | 302 | Hypothetical 7-bladed beta-propeller-like protein; | 95.92 | |
| 1xi4_A | 1630 | Clathrin heavy chain; alpha-ZIG-ZAG, beta-propelle | 95.71 | |
| 2zwa_A | 695 | Leucine carboxyl methyltransferase 2; HET: SAH CIT | 95.54 | |
| 2be1_A | 339 | Serine/threonine-protein kinase/endoribonuclease; | 95.41 | |
| 3s25_A | 302 | Hypothetical 7-bladed beta-propeller-like protein; | 95.38 | |
| 2zwa_A | 695 | Leucine carboxyl methyltransferase 2; HET: SAH CIT | 95.14 | |
| 2wg3_C | 463 | Hedgehog-interacting protein; lipoprotein, develop | 94.67 | |
| 3qhy_B | 282 | Beta-lactamase inhibitory protein II; enyzme-inhib | 92.51 | |
| 3sbq_A | 638 | Nitrous-oxide reductase; beta-propeller, cupredoxi | 92.41 | |
| 4hvt_A | 711 | Ritya.17583.B, post-proline cleaving enzyme; ssgci | 92.33 | |
| 1cru_A | 454 | Protein (soluble quinoprotein glucose dehydrogena; | 92.17 | |
| 3qhy_B | 282 | Beta-lactamase inhibitory protein II; enyzme-inhib | 91.4 | |
| 3b7f_A | 394 | Glycosyl hydrolase, BNR repeat; 7-bladed beta-prop | 88.68 | |
| 3sbq_A | 638 | Nitrous-oxide reductase; beta-propeller, cupredoxi | 87.11 | |
| 3uc1_A | 327 | DNA gyrase subunit A; DNA binding protein, topoiso | 81.52 |
| >2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-71 Score=595.91 Aligned_cols=524 Identities=16% Similarity=0.249 Sum_probs=453.4
Q ss_pred eeeeeeeccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCc
Q psy12614 15 GVHNIKFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGF 92 (708)
Q Consensus 15 ~~~~~~~~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~ 92 (708)
.+++.+.+.||.+.|+|++|||||++||+|+.|+.|+|||. +++.+. .+.+|. ..|.+++|+ +++|++++.|++
T Consensus 5 ~~~e~~~L~GH~~~V~~~a~spdg~~las~~~d~~v~iWd~-~~~~~~-~l~gh~--~~V~~l~fspdg~~las~~~d~~ 80 (577)
T 2ymu_A 5 GVKERNRLEAHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQ-TLTGHS--SSVWGVAFSPDGQTIASASDDKT 80 (577)
T ss_dssp CCCEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEE-EEECCS--SCEEEEEECTTSSEEEEEETTSC
T ss_pred CcEEeeEECCCCCcEEEEEECCCCCEEEEEeCCCEEEEEEC-CCCEEE-EEeCCC--CCEEEEEECCCCCEEEEEeCCCE
Confidence 34556679999999999999999999999999999999995 566665 899999 999999999 899999999999
Q ss_pred EEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEE-------------------------
Q psy12614 93 VNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLY------------------------- 147 (708)
Q Consensus 93 i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~------------------------- 147 (708)
|++||+ +++++..+.+|.+.|.+++|+|++++|++++.|+.+++|+........
T Consensus 81 i~vWd~-~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 159 (577)
T 2ymu_A 81 VKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASD 159 (577)
T ss_dssp EEEEET-TSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCCEEEEECCCSSCEEEEEECTTSSCEEEEET
T ss_pred EEEEEC-CCCEEEEEECCCCCEEEEEECCCCCEEEEEcCCCceeecccccceeeeccCCCCceeeeeeecCCccceeccc
Confidence 999996 578889999999999999999999999999999999999975432110
Q ss_pred -------------EEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEcc
Q psy12614 148 -------------EKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCA 213 (708)
Q Consensus 148 -------------~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 213 (708)
......|...|.++.|+|++++|++++.| .|++||. +++.+..+. .+...|.+++|+|
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~w~~-~~~~~~~~~-------~~~~~v~~~~~s~ 231 (577)
T 2ymu_A 160 DKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLT-------GHSSSVRGVAFSP 231 (577)
T ss_dssp TSEEEEECTTSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEE-------CCSSCEEEEEECT
T ss_pred ccceeccccceeeeeeccCCCcceeeeeecCCCCEEEEEcCCCEEEEEeC-CCcEEEEEe-------cCCCCEEEEEECC
Confidence 12233466788999999999999999999 9999995 567776665 3378899999999
Q ss_pred CCE-EEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcce
Q psy12614 214 DFT-IITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVW 292 (708)
Q Consensus 214 ~~~-l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~ 292 (708)
+++ +++++.|+.|++||. +++.+..+.+|...|.+++|+|+++.|++++.|+.|++|+... +
T Consensus 232 dg~~l~~~~~d~~i~~w~~-~~~~~~~~~~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~~~---------~------- 294 (577)
T 2ymu_A 232 DGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVNGVAFRPDGQTIASASDDKTVKLWNRNG---------Q------- 294 (577)
T ss_dssp TSSCEEEEETTSCEEEECT-TSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTS---------C-------
T ss_pred CCCEEEEEeCCCEEEEEeC-CCCEEEEEecCCCCEEEEEEcCCCCEEEEEeCCCEEEEEeCCC---------c-------
Confidence 995 999999999999995 5788889999999999999999999999999999999999764 2
Q ss_pred EEeEEEeccccceEEEEEe--CCEEEEEcCCCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEEE-cCCeEEEEEe
Q psy12614 293 VRSVNRVIHEGDVKSLALH--GNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQ-YTSHLELWSL 369 (708)
Q Consensus 293 ~~~~~~~~~~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~-~~~~i~i~~~ 369 (708)
....+.+|...|.+++++ +..+++++.|+.+++|++....+..+..+.....+++++|++++++++ .++.+++|+.
T Consensus 295 -~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~ 373 (577)
T 2ymu_A 295 -LLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQHLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR 373 (577)
T ss_dssp -EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred -EEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeeEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcC
Confidence 466788999999999999 889999999999999999988887777666777889999999999985 7899999995
Q ss_pred cCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEEE-cCCceEEEEEEecCCcceeEEeecCCc
Q psy12614 370 GSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYS-TESCVRLHSLDLDGDKPQISRIKNLPA 448 (708)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~ 448 (708)
.. .+......|...|.+++|+|+|++|+++ .|+.|++|+.. .. .+.. +.+
T Consensus 374 ~~----------------------~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~~---~~-~~~~---~~~ 424 (577)
T 2ymu_A 374 NG----------------------QLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN---GQ-LLQT---LTG 424 (577)
T ss_dssp TC----------------------CEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTT---CC-EEEE---EEC
T ss_pred CC----------------------CEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeCC---CC-EEEE---ecC
Confidence 43 3455566889999999999999999985 59999999853 22 2333 556
Q ss_pred ccccceeEEEEEecCCCeEEEEecCCc--EEEecCCCeEEEEEecCCCCCccCcceEEEEECCCCcEEEEEecCCeEEEE
Q psy12614 449 PLFKSIFTHVLISADSTLLLAVSLNGP--LYIIDLSSLEIKYCVDPYKSNLMSDVISLVQMSECKQYIVCADRKSHVVIW 526 (708)
Q Consensus 449 ~~~~~~i~~~~~s~d~~~l~~~~~dg~--i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw 526 (708)
|.. .|++++|+||+++|++++.|+. +|+.+. +.+..+. +| ...|++++|+||+++||+++.|+.|++|
T Consensus 425 ~~~--~v~~~~~s~d~~~l~~~~~d~~v~~w~~~~---~~~~~~~---~~--~~~v~~~~~spd~~~las~~~d~~i~iw 494 (577)
T 2ymu_A 425 HSS--SVWGVAFSPDDQTIASASDDKTVKLWNRNG---QLLQTLT---GH--SSSVRGVAFSPDGQTIASASDDKTVKLW 494 (577)
T ss_dssp CSS--CEEEEEECTTSSEEEEEETTSEEEEEETTS---CEEEEEE---CC--SSCEEEEEECTTSCEEEEEETTSEEEEE
T ss_pred CCC--CeEEEEECCCCCEEEEEcCCCEEEEEECCC---CEEEEEc---CC--CCCEEEEEEcCCCCEEEEEeCCCEEEEE
Confidence 654 7888999999999999999998 888643 3445554 45 7789999999999999999999999999
Q ss_pred ECC-ceeeecCCCCCCceEEEEcCCCCEEEEEecCCcEEEEEcCCCCCCchhhhhhccCchhhhcCCCCeeEEEeCCCCC
Q psy12614 527 KNG-QHHASLPRYRKPSTAMAIHPTLSTLVTVYSDHRIVEFDLNRKAFTTFSRKLETNHPNEWLSRQLPVLGIEFDPQDS 605 (708)
Q Consensus 527 ~~~-~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~~~ 605 (708)
|.. +....+.+|...|++++|+||+++||+++.||.|++||.. ++.. ..+.+|.++|.+++|+|||+
T Consensus 495 ~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~~-~~~~-----------~~~~~h~~~v~~~~fs~dg~ 562 (577)
T 2ymu_A 495 NRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN-GQLL-----------QTLTGHSSSVWGVAFSPDGQ 562 (577)
T ss_dssp ETTSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTT-SCEE-----------EEEECCSSCEEEEEECTTSS
T ss_pred cCCCCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeCC-CCEE-----------EEEcCCCCCEEEEEEcCCCC
Confidence 987 5556899999999999999999999999999999999964 4433 46778999999999999999
Q ss_pred ceEEEEcCeeEEEEe
Q psy12614 606 SLIYLMDDSALCVIN 620 (708)
Q Consensus 606 ~l~~~~~d~~i~~wd 620 (708)
+|++++.|++|++||
T Consensus 563 ~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 563 TIASASSDKTVKLWN 577 (577)
T ss_dssp CEEEEETTSCEEEEC
T ss_pred EEEEEeCCCEEEEeC
Confidence 999999999999997
|
| >1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-67 Score=566.94 Aligned_cols=530 Identities=14% Similarity=0.147 Sum_probs=435.5
Q ss_pred cCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECCC
Q psy12614 23 APEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMRR 100 (708)
Q Consensus 23 ~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~ 100 (708)
..+.+.+.+++|+|||++||+++ ++.|+|||+.++.... .+.+|. ..|++++|+ |++||+|+.|++|++||+.+
T Consensus 15 ~~~~g~~~~~~~spdg~~l~~~~-~~~v~l~~~~~~~~~~-~~~~h~--~~v~~~~~spdg~~lasg~~d~~v~lWd~~~ 90 (611)
T 1nr0_A 15 RTARGTAVVLGNTPAGDKIQYCN-GTSVYTVPVGSLTDTE-IYTEHS--HQTTVAKTSPSGYYCASGDVHGNVRIWDTTQ 90 (611)
T ss_dssp CCCTTCCCCCEECTTSSEEEEEE-TTEEEEEETTCSSCCE-EECCCS--SCEEEEEECTTSSEEEEEETTSEEEEEESSS
T ss_pred CcccCceeEEeeCCCCCEEEeCC-CCEEEEecCCCcccCe-EecCCC--CceEEEEECCCCcEEEEEeCCCCEEEeECCC
Confidence 34568889999999999999998 4699999999887776 899999 999999999 99999999999999999975
Q ss_pred C--eEeEEEeecCCceEEEEEecCCCEEEEEeCC----CcEEEEEccCCcEEEEEecccccccEEEEEECCCCC-EEEEe
Q psy12614 101 L--NIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQ----GHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGD-YLVTG 173 (708)
Q Consensus 101 ~--~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d----~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~-~l~~~ 173 (708)
+ .....+.+|.+.|.+++|+||+++||+++.+ +.|++|| .++.. ..+.+|...|.+++|+|++. .|+++
T Consensus 91 ~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd--~~~~~--~~l~gh~~~v~~v~f~p~~~~~l~s~ 166 (611)
T 1nr0_A 91 TTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFD--TGTSN--GNLTGQARAMNSVDFKPSRPFRIISG 166 (611)
T ss_dssp TTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETT--TCCBC--BCCCCCSSCEEEEEECSSSSCEEEEE
T ss_pred CcceeeEeecccCCceEEEEECCCCCEEEEEECCCCceeEEEEee--CCCCc--ceecCCCCCceEEEECCCCCeEEEEE
Confidence 4 3456788999999999999999999998865 3677776 44444 67889999999999999987 69999
Q ss_pred cCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCeeEEEee-------ccc
Q psy12614 174 CAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDVK-------THK 244 (708)
Q Consensus 174 ~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~~-------~~~ 244 (708)
+.| +|++||..+++....+. +|...|.+++|+|||+ +++++.|+.|++||+.+++.+..+. +|.
T Consensus 167 s~D~~v~lwd~~~~~~~~~l~-------~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~ 239 (611)
T 1nr0_A 167 SDDNTVAIFEGPPFKFKSTFG-------EHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHS 239 (611)
T ss_dssp ETTSCEEEEETTTBEEEEEEC-------CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSS
T ss_pred eCCCeEEEEECCCCeEeeeec-------cccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccC
Confidence 999 99999998888777664 4488999999999995 8999999999999999999888874 799
Q ss_pred cCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEec---cccceEEEEEeCCEEEEEcCC
Q psy12614 245 KDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVI---HEGDVKSLALHGNRLYSGGLD 321 (708)
Q Consensus 245 ~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~---~~~~v~~l~~~~~~l~s~~~d 321 (708)
..|.+++|+|++++|++++.|+.|++||+.+ ++ ....+.. +...+..+.+.+..+++++.|
T Consensus 240 ~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~--------~~--------~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d 303 (611)
T 1nr0_A 240 GSVFGLTWSPDGTKIASASADKTIKIWNVAT--------LK--------VEKTIPVGTRIEDQQLGIIWTKQALVSISAN 303 (611)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTT--------TE--------EEEEEECCSSGGGCEEEEEECSSCEEEEETT
T ss_pred CCEEEEEECCCCCEEEEEeCCCeEEEEeCCC--------Cc--------eeeeecCCCCccceeEEEEEcCCEEEEEeCC
Confidence 9999999999999999999999999999988 54 3333432 334566777789999999999
Q ss_pred CeEEEEeCCCCce-eecCccCCCCceEEEEcCCcEEEEE-cCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEE
Q psy12614 322 SYLSLSYYPPKTL-VKYPCTLAQSTPVSLAKDIQHVLLQ-YTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMS 399 (708)
Q Consensus 322 ~~i~iw~~~~~~~-~~~~~~~~~~~~~~~s~~~~~l~~~-~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (708)
+.+++|+...... ..+.++.....+++++|+|++++++ .|+.|++||+.++. ......
T Consensus 304 ~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~--------------------~~~~~~ 363 (611)
T 1nr0_A 304 GFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGI--------------------SNRVFP 363 (611)
T ss_dssp CCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCC--------------------EEECSS
T ss_pred CcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCc--------------------eeeecc
Confidence 9999999987653 3344566677899999999999985 89999999998765 222222
Q ss_pred ecCCCceEEEEeCCCCcEEEEEcCCceEEEEEEecCCcc----------eeEEe-------------------------e
Q psy12614 400 AVNNATIRCSVVSNDGKYVAYSTESCVRLHSLDLDGDKP----------QISRI-------------------------K 444 (708)
Q Consensus 400 ~~~~~~i~~~~~s~~g~~l~~~~d~~i~i~~~~~~~~~~----------~~~~~-------------------------~ 444 (708)
..|...|.++++++++.++..+.|+.+++|++....... ....+ .
T Consensus 364 ~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~ 443 (611)
T 1nr0_A 364 DVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLT 443 (611)
T ss_dssp CSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEE
T ss_pred cCCcceEEEEEECCCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCcee
Confidence 468889999999998876666779999999875421100 00000 0
Q ss_pred cCCcccccceeEEEEEecCCCeEEEEecCCc--EEEecCCCeEEEEEecCCCCCccCcceEEEEECCCCcEEEEEecCCe
Q psy12614 445 NLPAPLFKSIFTHVLISADSTLLLAVSLNGP--LYIIDLSSLEIKYCVDPYKSNLMSDVISLVQMSECKQYIVCADRKSH 522 (708)
Q Consensus 445 ~~~~~~~~~~i~~~~~s~d~~~l~~~~~dg~--i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~ 522 (708)
.++ + ...+.+++|+|||++||+++.|+. +|++..+....+.. .+| ...|++++|||||++|++++.|++
T Consensus 444 ~~~-~--~~~v~~va~spdg~~lasgs~D~~v~lwd~~~~~~~~~~~----~~h--~~~v~~v~fspdg~~las~s~d~~ 514 (611)
T 1nr0_A 444 EVP-I--SYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKT----IVH--PAEITSVAFSNNGAFLVATDQSRK 514 (611)
T ss_dssp EEE-C--SSCEEEEEECTTSCEEEEEETTSEEEEEEEETTEEEEEEE----EEC--SSCEEEEEECTTSSEEEEEETTSC
T ss_pred eee-c--CCCceEEEEeCCCCEEEEeCCCCeEEEEEccCCceeeeec----cCC--CCceEEEEECCCCCEEEEEcCCCC
Confidence 000 1 235678999999999999999999 99998763322232 245 779999999999999999999999
Q ss_pred EEEEECCc-eee--e--cCCCCCCceEEEEcCCCCEEEEEecCCcEEEEEcCCCCCCchhhhhhccCchhhhcC-CCCee
Q psy12614 523 VVIWKNGQ-HHA--S--LPRYRKPSTAMAIHPTLSTLVTVYSDHRIVEFDLNRKAFTTFSRKLETNHPNEWLSR-QLPVL 596 (708)
Q Consensus 523 i~iw~~~~-~~~--~--~~~~~~~v~~l~~s~d~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~ 596 (708)
|++|++.+ ... . +.+|...|.+++|+||+++||+++.|++|++||++++... ....+.+| ...|.
T Consensus 515 v~~w~~~~~~~~~~~~~~~~H~~~V~~v~fspdg~~lasgs~D~~v~lW~~~~~~~~---------~~~~~~~h~~~~v~ 585 (611)
T 1nr0_A 515 VIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDH---------PIIIKGAHAMSSVN 585 (611)
T ss_dssp EEEEEGGGTTEESCCCCCCCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCTTSC---------CEEETTSSTTSCEE
T ss_pred EEEEEcCCCCceeeeeeeeecccceeEEEECCCCCEEEEEECCCcEEEEECCCcccc---------cchhhccCcccCee
Confidence 99999985 333 2 3449999999999999999999999999999999876532 11245578 89999
Q ss_pred EEEeCCCCCceEEEEcCeeEEEEecC
Q psy12614 597 GIEFDPQDSSLIYLMDDSALCVINKN 622 (708)
Q Consensus 597 ~l~~s~~~~~l~~~~~d~~i~~wd~~ 622 (708)
+++|+||++ |++++.|++|++||+.
T Consensus 586 ~v~fs~d~~-l~s~~~D~~i~lW~~~ 610 (611)
T 1nr0_A 586 SVIWLNETT-IVSAGQDSNIKFWNVP 610 (611)
T ss_dssp EEEEEETTE-EEEEETTSCEEEEECC
T ss_pred EEEEcCCCE-EEEecCCCCEEEEecc
Confidence 999999999 9999999999999983
|
| >1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-64 Score=540.86 Aligned_cols=494 Identities=14% Similarity=0.201 Sum_probs=405.3
Q ss_pred eeeeeccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCe-EEEEEecCCCCCcEEEEEEe--CCEEEEEcCC---
Q psy12614 17 HNIKFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPH-VDRVFIGDPLSNSIECLTWF--NDRLFSGGLQ--- 90 (708)
Q Consensus 17 ~~~~~~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~-~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d--- 90 (708)
...+.+.+|.+.|++++|+|+|++||+|+.||+|+|||+.+++. +...+.+|. ++|.+++|+ +++|++++.+
T Consensus 50 ~~~~~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~--~~v~~v~fs~dg~~l~~~~~~~~~ 127 (611)
T 1nr0_A 50 TDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFS--GPVKDISWDSESKRIAAVGEGRER 127 (611)
T ss_dssp SCCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSS--SCEEEEEECTTSCEEEEEECCSSC
T ss_pred ccCeEecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeEeecccC--CceEEEEECCCCCEEEEEECCCCc
Confidence 34567889999999999999999999999999999999976433 334788999 999999999 8899988765
Q ss_pred -CcEEEEECCCCeEeEEEeecCCceEEEEEecCCC-EEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCC
Q psy12614 91 -GFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKR-LLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGD 168 (708)
Q Consensus 91 -~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~-~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~ 168 (708)
+.|++|| +++....+.+|...|++++|+|++. .|++++.|++|++||..+++.. ..+.+|...|.+++|+||++
T Consensus 128 ~~~v~~wd--~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~--~~l~~H~~~V~~v~fspdg~ 203 (611)
T 1nr0_A 128 FGHVFLFD--TGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFK--STFGEHTKFVHSVRYNPDGS 203 (611)
T ss_dssp SEEEEETT--TCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEE--EEECCCSSCEEEEEECTTSS
T ss_pred eeEEEEee--CCCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEe--eeeccccCceEEEEECCCCC
Confidence 3677776 5667778899999999999999987 5999999999999999888776 78899999999999999999
Q ss_pred EEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCeeEEE-------
Q psy12614 169 YLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSD------- 239 (708)
Q Consensus 169 ~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~------- 239 (708)
+|++++.| +|++||+.+++.+..+.........|...|.+++|+|+|+ +++++.|+.|++||+.+++.+..
T Consensus 204 ~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~ 283 (611)
T 1nr0_A 204 LFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRI 283 (611)
T ss_dssp EEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSG
T ss_pred EEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCc
Confidence 99999999 9999999999988776421100002488999999999995 99999999999999988765443
Q ss_pred ------------------------------------eeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCC
Q psy12614 240 ------------------------------------VKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTS 283 (708)
Q Consensus 240 ------------------------------------~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~ 283 (708)
+.+|...|.+++|+|++++|++++.|+.|++||+.+
T Consensus 284 ~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~-------- 355 (611)
T 1nr0_A 284 EDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDIST-------- 355 (611)
T ss_dssp GGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT--------
T ss_pred cceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCC--------
Confidence 347889999999999999999999999999999998
Q ss_pred CCCCCCcceEEeEEE-eccccceEEEEEe-CCEEEEEcCCCeEEEEeCCCCceeecC----ccCCCCceEEEEcCCcEEE
Q psy12614 284 GPEQGSSVWVRSVNR-VIHEGDVKSLALH-GNRLYSGGLDSYLSLSYYPPKTLVKYP----CTLAQSTPVSLAKDIQHVL 357 (708)
Q Consensus 284 g~~~~~~~~~~~~~~-~~~~~~v~~l~~~-~~~l~s~~~d~~i~iw~~~~~~~~~~~----~~~~~~~~~~~s~~~~~l~ 357 (708)
++ ....+ .+|...|.+++++ +..+++++.|+.+++|++.+....... ....+...++++|+++.++
T Consensus 356 ~~--------~~~~~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~ 427 (611)
T 1nr0_A 356 GI--------SNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAV 427 (611)
T ss_dssp CC--------EEECSSCSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEE
T ss_pred Cc--------eeeecccCCcceEEEEEECCCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEE
Confidence 64 22222 5789999999999 778999999999999998775422110 0123446788999998888
Q ss_pred EEcCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEEEc-CCceEEEEEEecCC
Q psy12614 358 LQYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYST-ESCVRLHSLDLDGD 436 (708)
Q Consensus 358 ~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~-d~~i~i~~~~~~~~ 436 (708)
++.++.+.+|+.. ++... .+...+.+++|+|||++||++. |++|++|++.. .
T Consensus 428 ~~~~~~v~~~~~~-----------------------~~~~~--~~~~~v~~va~spdg~~lasgs~D~~v~lwd~~~--~ 480 (611)
T 1nr0_A 428 AACYKHIAIYSHG-----------------------KLTEV--PISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSG--A 480 (611)
T ss_dssp EEESSEEEEEETT-----------------------EEEEE--ECSSCEEEEEECTTSCEEEEEETTSEEEEEEEET--T
T ss_pred EEeCceEEEEeCC-----------------------ceeee--ecCCCceEEEEeCCCCEEEEeCCCCeEEEEEccC--C
Confidence 8888999999822 22222 3677899999999999999955 99999999985 2
Q ss_pred cceeEEeecCCcccccceeEEEEEecCCCeEEEEecCCc--EEEecCCCeEEEEEecCCCCCccCcceEEEEECCCCcEE
Q psy12614 437 KPQISRIKNLPAPLFKSIFTHVLISADSTLLLAVSLNGP--LYIIDLSSLEIKYCVDPYKSNLMSDVISLVQMSECKQYI 514 (708)
Q Consensus 437 ~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~~~~~dg~--i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l 514 (708)
. +..+.. .+|.. .|++++|+|||++|++++.|+. +|++.... +.+.. ....+| ...|++++|+|||++|
T Consensus 481 ~--~~~~~~-~~h~~--~v~~v~fspdg~~las~s~d~~v~~w~~~~~~-~~~~~-~~~~~H--~~~V~~v~fspdg~~l 551 (611)
T 1nr0_A 481 S--VSEVKT-IVHPA--EITSVAFSNNGAFLVATDQSRKVIPYSVANNF-ELAHT-NSWTFH--TAKVACVSWSPDNVRL 551 (611)
T ss_dssp E--EEEEEE-EECSS--CEEEEEECTTSSEEEEEETTSCEEEEEGGGTT-EESCC-CCCCCC--SSCEEEEEECTTSSEE
T ss_pred c--eeeeec-cCCCC--ceEEEEECCCCCEEEEEcCCCCEEEEEcCCCC-ceeee-eeeeec--ccceeEEEECCCCCEE
Confidence 2 221111 34543 7888999999999999999999 88887621 22221 112236 8899999999999999
Q ss_pred EEEecCCeEEEEECCce---e-eecCCC-CCCceEEEEcCCCCEEEEEecCCcEEEEEcC
Q psy12614 515 VCADRKSHVVIWKNGQH---H-ASLPRY-RKPSTAMAIHPTLSTLVTVYSDHRIVEFDLN 569 (708)
Q Consensus 515 ~~~~~d~~i~iw~~~~~---~-~~~~~~-~~~v~~l~~s~d~~~l~~~~~dg~i~vwd~~ 569 (708)
|+++.|++|++|++.+. . ..+.+| ...|++++|+||++ |++++.|++|++|+++
T Consensus 552 asgs~D~~v~lW~~~~~~~~~~~~~~~h~~~~v~~v~fs~d~~-l~s~~~D~~i~lW~~~ 610 (611)
T 1nr0_A 552 ATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETT-IVSAGQDSNIKFWNVP 610 (611)
T ss_dssp EEEETTSCEEEEETTCTTSCCEEETTSSTTSCEEEEEEEETTE-EEEEETTSCEEEEECC
T ss_pred EEEECCCcEEEEECCCcccccchhhccCcccCeeEEEEcCCCE-EEEecCCCCEEEEecc
Confidence 99999999999999842 2 467789 89999999999998 9999999999999974
|
| >2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-62 Score=527.21 Aligned_cols=485 Identities=16% Similarity=0.248 Sum_probs=412.8
Q ss_pred EEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEc
Q psy12614 63 RVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQI 140 (708)
Q Consensus 63 ~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~ 140 (708)
..|+||. +.|++++|+ |++||+++.|++|++||. +++++.++.+|.+.|++++|+||+++||+++.|+.|++||.
T Consensus 10 ~~L~GH~--~~V~~~a~spdg~~las~~~d~~v~iWd~-~~~~~~~l~gh~~~V~~l~fspdg~~las~~~d~~i~vWd~ 86 (577)
T 2ymu_A 10 NRLEAHS--SSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR 86 (577)
T ss_dssp EEECCCS--SCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred eEECCCC--CcEEEEEECCCCCEEEEEeCCCEEEEEEC-CCCEEEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEEC
Confidence 4799999 999999999 899999999999999995 77899999999999999999999999999999999999996
Q ss_pred cCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEE---------Eeccc-------------
Q psy12614 141 SDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKM---------SLDKS------------- 197 (708)
Q Consensus 141 ~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~---------~~~~~------------- 197 (708)
. ++.+ ..+.+|...|.+++|+|++++|++++.| .+++|+.......... .....
T Consensus 87 ~-~~~~--~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 163 (577)
T 2ymu_A 87 N-GQLL--QTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTV 163 (577)
T ss_dssp T-SCEE--EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTSEE
T ss_pred C-CCEE--EEEECCCCCEEEEEECCCCCEEEEEcCCCceeecccccceeeeccCCCCceeeeeeecCCccceecccccce
Confidence 5 4554 6788999999999999999999999999 9999997543221110 00000
Q ss_pred -----------CCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEecC
Q psy12614 198 -----------SKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVD 265 (708)
Q Consensus 198 -----------~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d 265 (708)
....+...+.+++++|++. +++++.||.|++||. +++.+..+.+|...|.+++|+|++++|++++.|
T Consensus 164 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~w~~-~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d 242 (577)
T 2ymu_A 164 KLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDD 242 (577)
T ss_dssp EEECTTSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETT
T ss_pred eccccceeeeeeccCCCcceeeeeecCCCCEEEEEcCCCEEEEEeC-CCcEEEEEecCCCCEEEEEECCCCCEEEEEeCC
Confidence 0003367788999999996 899999999999995 678888999999999999999999999999999
Q ss_pred CeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEEEcCCCeEEEEeCCCCceeecCccCCC
Q psy12614 266 PTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQ 343 (708)
Q Consensus 266 g~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~ 343 (708)
+.|++|+... + ....+.+|...|.+++|+ +..+++++.|+.+++|+.....+..+.++...
T Consensus 243 ~~i~~w~~~~---------~--------~~~~~~~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~~~~~~~~~~~h~~~ 305 (577)
T 2ymu_A 243 KTVKLWNRNG---------Q--------LLQTLTGHSSSVNGVAFRPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSS 305 (577)
T ss_dssp SCEEEECTTS---------C--------EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSCEEEEECCCSSC
T ss_pred CEEEEEeCCC---------C--------EEEEEecCCCCEEEEEEcCCCCEEEEEeCCCEEEEEeCCCcEEEEEecCCCC
Confidence 9999999754 2 567788999999999999 88999999999999999988777777767777
Q ss_pred CceEEEEcCCcEEEEE-cCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEEEc
Q psy12614 344 STPVSLAKDIQHVLLQ-YTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYST 422 (708)
Q Consensus 344 ~~~~~~s~~~~~l~~~-~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~ 422 (708)
...++++|+++.++++ .++.+++|+..... ......+...+.+++|+|+|++|+++.
T Consensus 306 v~~~~~~~~~~~l~t~~~d~~i~~w~~~~~~----------------------~~~~~~~~~~v~~~~~s~~g~~l~~~~ 363 (577)
T 2ymu_A 306 VWGVAFSPDGQTIASASDDKTVKLWNRNGQH----------------------LQTLTGHSSSVWGVAFSPDGQTIASAS 363 (577)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTSCE----------------------EEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred eEEEEECCCCCEEEEEeCCCeEEEEeCCCCe----------------------eEEEeCCCCCEEEEEECCCCCEEEEEe
Confidence 7889999999999874 78999999976532 334457889999999999999999865
Q ss_pred -CCceEEEEEEecCCcceeEEeecCCcccccceeEEEEEecCCCeEEEEecCCc--EEEecCCCeEEEEEecCCCCCccC
Q psy12614 423 -ESCVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVLISADSTLLLAVSLNGP--LYIIDLSSLEIKYCVDPYKSNLMS 499 (708)
Q Consensus 423 -d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~~~~~dg~--i~~~~~~~~~~~~~~~~~~~~~~~ 499 (708)
|+.+++|+.. .. .+.. +.+|.. .|++++|+||+++|++++.|+. +|+.. .+.+..+. +| .
T Consensus 364 ~dg~v~~~~~~---~~-~~~~---~~~~~~--~v~~~~~s~dg~~l~~~~~d~~v~~~~~~---~~~~~~~~---~~--~ 426 (577)
T 2ymu_A 364 DDKTVKLWNRN---GQ-LLQT---LTGHSS--SVRGVAFSPDGQTIASASDDKTVKLWNRN---GQLLQTLT---GH--S 426 (577)
T ss_dssp TTSEEEEEETT---CC-EEEE---EECCSS--CEEEEEECTTSSCEEEEETTSEEEEECTT---CCEEEEEE---CC--S
T ss_pred CCCEEEEEcCC---CC-EEEE---ecCCCC--CeEEEEECCCCCEEEEEeCCCEEEEEeCC---CCEEEEec---CC--C
Confidence 9999999953 22 2333 455644 7888999999999999999998 77643 24555554 45 7
Q ss_pred cceEEEEECCCCcEEEEEecCCeEEEEECC-ceeeecCCCCCCceEEEEcCCCCEEEEEecCCcEEEEEcCCCCCCchhh
Q psy12614 500 DVISLVQMSECKQYIVCADRKSHVVIWKNG-QHHASLPRYRKPSTAMAIHPTLSTLVTVYSDHRIVEFDLNRKAFTTFSR 578 (708)
Q Consensus 500 ~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~-~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~dg~i~vwd~~~~~~~~~~~ 578 (708)
..|++++|+||+++|++++.|+.|++||.. +....+.+|...|++++|+||+++|++++.|+.|++||.. ++..
T Consensus 427 ~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~~-~~~~---- 501 (577)
T 2ymu_A 427 SSVWGVAFSPDDQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN-GQLL---- 501 (577)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTSCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEETT-SCEE----
T ss_pred CCeEEEEECCCCCEEEEEcCCCEEEEEECCCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcCC-CCEE----
Confidence 789999999999999999999999999988 4555889999999999999999999999999999999964 4433
Q ss_pred hhhccCchhhhcCCCCeeEEEeCCCCCceEEEEcCeeEEEEecC
Q psy12614 579 KLETNHPNEWLSRQLPVLGIEFDPQDSSLIYLMDDSALCVINKN 622 (708)
Q Consensus 579 ~~~~~~~~~~~~~~~~i~~l~~s~~~~~l~~~~~d~~i~~wd~~ 622 (708)
..+.+|...|.+++|+|||++|++++.|+.|++||..
T Consensus 502 -------~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~~ 538 (577)
T 2ymu_A 502 -------QTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN 538 (577)
T ss_dssp -------EEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTT
T ss_pred -------EEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeCC
Confidence 4667899999999999999999999999999999964
|
| >3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-62 Score=572.42 Aligned_cols=549 Identities=12% Similarity=0.169 Sum_probs=456.3
Q ss_pred eeeccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEE
Q psy12614 19 IKFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEY 96 (708)
Q Consensus 19 ~~~~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vw 96 (708)
...+.+|.+.|++++|+|+|++||+|+.||.|+|||+.+++.+. .+.+|. ..|.+++|+ +++|++++.||+|++|
T Consensus 608 ~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~-~~~~h~--~~v~~~~~s~~~~~l~s~~~d~~v~vw 684 (1249)
T 3sfz_A 608 RLVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLL-DIKAHE--DEVLCCAFSSDDSYIATCSADKKVKIW 684 (1249)
T ss_dssp SEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEE-EECCCS--SCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred eEEEecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEE-EeccCC--CCEEEEEEecCCCEEEEEeCCCeEEEE
Confidence 34678999999999999999999999999999999999998876 889999 999999999 8999999999999999
Q ss_pred ECCCCeEeEEEeecCCceEEEEEec--CCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEec
Q psy12614 97 DMRRLNIKSSTAVTSGTCWCLSVHK--KKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGC 174 (708)
Q Consensus 97 d~~~~~~~~~~~~~~~~v~~~~~s~--~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~ 174 (708)
|+.+++++..+.+|...|.+++|+| ++.++++|+.|+.|++||+.+++.. ..+.+|.+.|.+++|+|++++|++++
T Consensus 685 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~--~~~~~h~~~v~~~~~sp~~~~l~s~s 762 (1249)
T 3sfz_A 685 DSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECR--NTMFGHTNSVNHCRFSPDDELLASCS 762 (1249)
T ss_dssp ETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEE--EEECCCSSCEEEEEECSSTTEEEEEE
T ss_pred ECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchh--heecCCCCCEEEEEEecCCCEEEEEE
Confidence 9999999999999999999999999 5568999999999999999999887 77889999999999999999999999
Q ss_pred CC-eEEEEEcCCCceEEEEEeccc------------------------------------------------CCCCCcee
Q psy12614 175 AA-AVRVWDIHKGHAIHKMSLDKS------------------------------------------------SKFSKNTA 205 (708)
Q Consensus 175 ~d-~i~iwd~~~~~~~~~~~~~~~------------------------------------------------~~~~~~~~ 205 (708)
.| .|++||+.+++....+..... ....+...
T Consensus 763 ~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~ 842 (1249)
T 3sfz_A 763 ADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHST 842 (1249)
T ss_dssp SSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSC
T ss_pred CCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCc
Confidence 99 999999988876665542110 00033677
Q ss_pred EEEEEEccCCE-EEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCC
Q psy12614 206 VWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSG 284 (708)
Q Consensus 206 v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g 284 (708)
+.+++|+|++. +++++.+|.|++||+.++..+..+.+|...|.+++|+|++++|++++.||.|++|++...........
T Consensus 843 v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~ 922 (1249)
T 3sfz_A 843 IQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVL 922 (1249)
T ss_dssp CCEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSE
T ss_pred eEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecCCCccceEEEEECCCCCEEEEEeCCCeEEEEEccccceeeeecc
Confidence 88999999995 88999999999999999999999999999999999999999999999999999999764100000000
Q ss_pred C-C-------C--------CCcceE-----EeEEEeccccceEEEEEe--CCEEEEEcCCCeEEEEeCCCCc-eeecCcc
Q psy12614 285 P-E-------Q--------GSSVWV-----RSVNRVIHEGDVKSLALH--GNRLYSGGLDSYLSLSYYPPKT-LVKYPCT 340 (708)
Q Consensus 285 ~-~-------~--------~~~~~~-----~~~~~~~~~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~~~-~~~~~~~ 340 (708)
. . . ...... .......+...+.+++++ ++++++++.+|.|++|++.+.. ......+
T Consensus 923 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h 1002 (1249)
T 3sfz_A 923 KQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGH 1002 (1249)
T ss_dssp EEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEECCCC
T ss_pred cceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCceeeecccC
Confidence 0 0 0 000000 000112234678899999 8999999999999999998876 4445556
Q ss_pred CCCCceEEEEcCCcEEEEE-cCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEE
Q psy12614 341 LAQSTPVSLAKDIQHVLLQ-YTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVA 419 (708)
Q Consensus 341 ~~~~~~~~~s~~~~~l~~~-~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~ 419 (708)
......++++|++++++++ .++.|++|++.++. . . ....+...+.+++++|++.+++
T Consensus 1003 ~~~v~~l~~s~dg~~l~s~~~dg~i~vwd~~~~~--------------------~-~-~~~~~~~~v~~~~~~~~~~l~~ 1060 (1249)
T 3sfz_A 1003 KKAVRHIQFTADGKTLISSSEDSVIQVWNWQTGD--------------------Y-V-FLQAHQETVKDFRLLQDSRLLS 1060 (1249)
T ss_dssp SSCCCCEEECSSSSCEEEECSSSBEEEEETTTTE--------------------E-E-CCBCCSSCEEEEEECSSSEEEE
T ss_pred CCceEEEEECCCCCEEEEEcCCCEEEEEECCCCc--------------------e-E-EEecCCCcEEEEEEcCCCcEEE
Confidence 6778899999999999885 78999999998755 1 1 2347888999999999988777
Q ss_pred EEcCCceEEEEEEecCCcceeEEeecCCcccccceeEEEEEecCCCeEEEEecCCc--EEEecCCCeEEEEEecCCCCCc
Q psy12614 420 YSTESCVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVLISADSTLLLAVSLNGP--LYIIDLSSLEIKYCVDPYKSNL 497 (708)
Q Consensus 420 ~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~~~~~dg~--i~~~~~~~~~~~~~~~~~~~~~ 497 (708)
.+.|+.|++||+.++.. ... +.+|.. .|++++|+||++++++++.|+. +|++..+. .+....+|
T Consensus 1061 ~~~dg~v~vwd~~~~~~---~~~---~~~~~~--~v~~~~~s~d~~~l~s~s~d~~v~iwd~~~~~-----~~~~l~~h- 1126 (1249)
T 3sfz_A 1061 WSFDGTVKVWNVITGRI---ERD---FTCHQG--TVLSCAISSDATKFSSTSADKTAKIWSFDLLS-----PLHELKGH- 1126 (1249)
T ss_dssp EESSSEEEEEETTTTCC---CEE---EECCSS--CCCCEEECSSSSSCEEECCSSCCCEECSSSSS-----CSBCCCCC-
T ss_pred EECCCcEEEEECCCCce---eEE---EcccCC--cEEEEEECCCCCEEEEEcCCCcEEEEECCCcc-----eeeeeccC-
Confidence 78899999999986332 222 445544 6777999999999999999999 89888772 33344566
Q ss_pred cCcceEEEEECCCCcEEEEEecCCeEEEEECCceee--ec---------CCCCCCceEEEEcCCCCEEEEEecCCcEEEE
Q psy12614 498 MSDVISLVQMSECKQYIVCADRKSHVVIWKNGQHHA--SL---------PRYRKPSTAMAIHPTLSTLVTVYSDHRIVEF 566 (708)
Q Consensus 498 ~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~--~~---------~~~~~~v~~l~~s~d~~~l~~~~~dg~i~vw 566 (708)
...|++++|+|+|++|++++.||.|++||+.+... .+ .+|.+.|++++|+||+++|++++ |.|++|
T Consensus 1127 -~~~v~~~~~s~dg~~lat~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~fs~dg~~l~s~~--g~v~vw 1203 (1249)
T 3sfz_A 1127 -NGCVRCSAFSLDGILLATGDDNGEIRIWNVSDGQLLHSCAPISVEEGTATHGGWVTDVCFSPDSKTLVSAG--GYLKWW 1203 (1249)
T ss_dssp -SSCEEEEEECSSSSEEEEEETTSCCCEEESSSSCCCCCCCCCC-------CCSCCCEEEECTTSSCEEEES--SSEEEB
T ss_pred -CCcEEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEeccccccccccccCceEEEEEECCCCCEEEECC--CeEEEE
Confidence 88999999999999999999999999999984432 22 57899999999999999999885 899999
Q ss_pred EcCCCCCCchhhhhhccCchhhhcCCCCeeEEEeCCCCCceEEEEcCeeEEEEecC
Q psy12614 567 DLNRKAFTTFSRKLETNHPNEWLSRQLPVLGIEFDPQDSSLIYLMDDSALCVINKN 622 (708)
Q Consensus 567 d~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~~~~l~~~~~d~~i~~wd~~ 622 (708)
|+.+++.. ..+..|...|.+++|+|||++|++++.||.|++|++.
T Consensus 1204 d~~~g~~~-----------~~~~~~~~~i~~~~~s~dg~~l~~~~~dg~v~vw~l~ 1248 (1249)
T 3sfz_A 1204 NVATGDSS-----------QTFYTNGTNLKKIHVSPDFRTYVTVDNLGILYILQVL 1248 (1249)
T ss_dssp CSSSCBCC-----------CCCCCSSCCCCCCEECSSSCCEEEECTTCCEEEECCC
T ss_pred ECCCCcee-----------eeeeccCCcccEEEECCCCCEEEEecCCcEEEEEeec
Confidence 99998866 4566788999999999999999999999999999974
|
| >1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-59 Score=512.43 Aligned_cols=517 Identities=12% Similarity=0.139 Sum_probs=437.2
Q ss_pred eeeeeccCCCCc-EEEEEEcC--CCCEEEEEeCCCcEEEEeCCCC-------CeEEEEEecCCCCCcEEEEEEe--CCEE
Q psy12614 17 HNIKFYAPEPKV-INCIACEP--KSSRLAVSRADQSIEIWDISET-------PHVDRVFIGDPLSNSIECLTWF--NDRL 84 (708)
Q Consensus 17 ~~~~~~~~h~~~-v~~~~~s~--~~~~la~~~~dg~v~iwd~~~~-------~~~~~~~~~h~~~~~v~~l~~~--~~~l 84 (708)
+..+.+.+|.+. |++++|+| ++++||+|+.||.|+|||+.++ ......+.+|. ..|.+++|+ +++|
T Consensus 54 ~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~--~~v~~~~~s~~~~~l 131 (615)
T 1pgu_A 54 PPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLA--GPISDISWDFEGRRL 131 (615)
T ss_dssp CSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCS--SCEEEEEECTTSSEE
T ss_pred ccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhhccc--ccEEEEEEeCCCCEE
Confidence 356678899999 99999999 9999999999999999999754 22334788898 999999999 8899
Q ss_pred EEEcCC----CcEEEEECCCCeEeEEEeecCCceEEEEEecCCC-EEEEEeCCCcEEEEEccCCcEEEEEecccccc---
Q psy12614 85 FSGGLQ----GFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKR-LLAAGTEQGHINLFQISDEGLLYEKLLDRQQG--- 156 (708)
Q Consensus 85 ~s~~~d----~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~-~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~--- 156 (708)
++++.+ +.|.+|| .++.+..+.+|...|.+++|+|+++ ++++++.|+.|++||+.+++.. ..+.+|..
T Consensus 132 ~~~~~~~~~~~~v~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~--~~~~~~~~~~~ 207 (615)
T 1pgu_A 132 CVVGEGRDNFGVFISWD--SGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFS--ASDRTHHKQGS 207 (615)
T ss_dssp EEEECCSSCSEEEEETT--TCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEE--EEECSSSCTTC
T ss_pred EEeccCCCCccEEEEEE--CCCcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCccee--eeecccCCCCc
Confidence 999887 6888887 6778889999999999999999998 8999999999999999998877 67888988
Q ss_pred cEEEEEECCC-CCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCC
Q psy12614 157 RILCTAWHSS-GDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKT 233 (708)
Q Consensus 157 ~v~~~~~s~d-~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~ 233 (708)
.|.+++|+|+ +++|++++.| .|++||+.+++.+..+..... .+...|.+++|+ ++. +++++.||.|++||+++
T Consensus 208 ~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~---~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~ 283 (615)
T 1pgu_A 208 FVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQE---PVQGGIFALSWL-DSQKFATVGADATIRVWDVTT 283 (615)
T ss_dssp CEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTB---CCCSCEEEEEES-SSSEEEEEETTSEEEEEETTT
T ss_pred eEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEeccccc---ccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCC
Confidence 9999999999 9999999999 999999999998887732100 127889999999 874 99999999999999999
Q ss_pred CeeEEEeecc----ccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEE
Q psy12614 234 GVQWSDVKTH----KKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLA 309 (708)
Q Consensus 234 ~~~~~~~~~~----~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~ 309 (708)
++.+..+..+ ...+.++.|+ +++++++++.||.|++||+.+ ++ ....+.+|...|.+++
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~g~i~~~d~~~--------~~--------~~~~~~~~~~~v~~~~ 346 (615)
T 1pgu_A 284 SKCVQKWTLDKQQLGNQQVGVVAT-GNGRIISLSLDGTLNFYELGH--------DE--------VLKTISGHNKGITALT 346 (615)
T ss_dssp TEEEEEEECCTTCGGGCEEEEEEE-ETTEEEEEETTSCEEEEETTE--------EE--------EEEEECCCSSCEEEEE
T ss_pred CcEEEEEcCCCCcccCceeEEEeC-CCCeEEEEECCCCEEEEECCC--------Cc--------EEEEEeCCCCCEEEEE
Confidence 9999888766 4678888886 889999999999999999987 54 6678889999999999
Q ss_pred EeCCEEEEEcCCCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEEEcCCeEEEEEecCCCCCCCCCCCCCCcccCC
Q psy12614 310 LHGNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPLL 389 (708)
Q Consensus 310 ~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~ 389 (708)
| .+ +++++.|+.|++|++. .+. ..+......++++++..++..+.++.+++|++....
T Consensus 347 ~-~~-l~~~~~dg~i~~w~~~--~~~--~~~~~~v~~~~~~~~~~l~~~~~d~~i~~~~~~~~~---------------- 404 (615)
T 1pgu_A 347 V-NP-LISGSYDGRIMEWSSS--SMH--QDHSNLIVSLDNSKAQEYSSISWDDTLKVNGITKHE---------------- 404 (615)
T ss_dssp T-TT-TEEEETTSCEEETTTT--EEE--CCCCSCEEEEECCSTTCCEEEETTTEEEETTEEEEE----------------
T ss_pred e-cC-cEEECCCCeEEEEEch--hhc--CcccCceEEEEECCCcEEEEEeCCCCEEEEEcccCc----------------
Confidence 9 88 9999999999999998 333 435566678888445555555799999999988644
Q ss_pred CCceEEEEEEecCCCceEEEEeCCCCcEEEEEcCCceEEEEEEecCCcceeEEeecCCcccccceeEEEEEecCCCeEEE
Q psy12614 390 SFPRLIVKMSAVNNATIRCSVVSNDGKYVAYSTESCVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVLISADSTLLLA 469 (708)
Q Consensus 390 ~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~~ 469 (708)
....+.+++++|++.+++++.++.+.+|++.. +. .+..+ . + ...+++++|+ +++|++
T Consensus 405 ------------~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~---~-~--~~~~~~~~~~--~~~l~~ 461 (615)
T 1pgu_A 405 ------------FGSQPKVASANNDGFTAVLTNDDDLLILQSFT--GD-IIKSV---R-L--NSPGSAVSLS--QNYVAV 461 (615)
T ss_dssp ------------CSSCEEEEEECSSSEEEEEETTSEEEEEETTT--CC-EEEEE---E-C--SSCEEEEEEC--SSEEEE
T ss_pred ------------ccCCceEEEEcCCCCEEEEeCCCceEEEeccC--Cc-eeeec---c-c--CCCceEEEEc--CCEEEE
Confidence 11267889999999999989999999999754 22 23322 1 2 3367779999 889999
Q ss_pred Eec-CCc--EEEecCCCeEEEEEecCCCCCccCcceEEEEECCCCcEEEEEecCCeEEEEECCce--eeecCC-CCCCce
Q psy12614 470 VSL-NGP--LYIIDLSSLEIKYCVDPYKSNLMSDVISLVQMSECKQYIVCADRKSHVVIWKNGQH--HASLPR-YRKPST 543 (708)
Q Consensus 470 ~~~-dg~--i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~--~~~~~~-~~~~v~ 543 (708)
++. ++. +|++..+ +... ....+| ...|++++|+|++++|++++.|+.|++||+.+. ...+.+ |...|+
T Consensus 462 ~~~~d~~i~~~~~~~~--~~~~--~~~~~~--~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~ 535 (615)
T 1pgu_A 462 GLEEGNTIQVFKLSDL--EVSF--DLKTPL--RAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKIN 535 (615)
T ss_dssp EETTTSCEEEEETTEE--EEEE--ECSSCC--SSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSCCCSSCEE
T ss_pred eecCCCeEEEEECCCc--cccc--cccCCc--cCceEEEEECCCCCEEEEcCCCCeEEEeeCCCCcceeEeecCCCCcee
Confidence 999 888 7777654 3321 344456 889999999999999999999999999999844 346777 999999
Q ss_pred EEEEcC----------CCCEEEEEecCCcEEEEEcCCC-CCCchhhhhhccCchhhhcCCCCeeEEEeCCCCCceEEEEc
Q psy12614 544 AMAIHP----------TLSTLVTVYSDHRIVEFDLNRK-AFTTFSRKLETNHPNEWLSRQLPVLGIEFDPQDSSLIYLMD 612 (708)
Q Consensus 544 ~l~~s~----------d~~~l~~~~~dg~i~vwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~~~~l~~~~~ 612 (708)
+++|+| ++++|++++.||.|++||++++ +.. ..+.+|...|.+++|+|+++ |++++.
T Consensus 536 ~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~-----------~~~~~h~~~v~~l~~s~~~~-l~s~~~ 603 (615)
T 1pgu_A 536 AISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKII-----------KALNAHKDGVNNLLWETPST-LVSSGA 603 (615)
T ss_dssp EEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCE-----------EETTSSTTCEEEEEEEETTE-EEEEET
T ss_pred EEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCCceec-----------hhhhcCccceEEEEEcCCCC-eEEecC
Confidence 999999 9999999999999999999987 433 45778999999999999999 999999
Q ss_pred CeeEEEEecCC
Q psy12614 613 DSALCVINKNK 623 (708)
Q Consensus 613 d~~i~~wd~~~ 623 (708)
|+.|++||++.
T Consensus 604 d~~v~iw~~~~ 614 (615)
T 1pgu_A 604 DACIKRWNVVL 614 (615)
T ss_dssp TSCEEEEEEC-
T ss_pred CceEEEEeeec
Confidence 99999999864
|
| >1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-57 Score=495.25 Aligned_cols=541 Identities=16% Similarity=0.141 Sum_probs=448.6
Q ss_pred cCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCC----CeEEEEEecCCCCCc-EEEEEEe----CCEEEEEcCCCcE
Q psy12614 23 APEPKVINCIACEPKSSRLAVSRADQSIEIWDISET----PHVDRVFIGDPLSNS-IECLTWF----NDRLFSGGLQGFV 93 (708)
Q Consensus 23 ~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~----~~~~~~~~~h~~~~~-v~~l~~~----~~~l~s~~~d~~i 93 (708)
..|.+.|++++|+|++++||+++ ++.|.|||+.++ +.+. .+.+|. .. |.+++|+ +++|++++.||.|
T Consensus 15 ~~~~~~v~~~~~spdg~~l~~~~-~~~v~v~~~~~~~~~~~~~~-~~~~h~--~~~v~~~~~sp~~~~~~l~s~~~dg~v 90 (615)
T 1pgu_A 15 STQRNFTTHLSYDPTTNAIAYPC-GKSAFVRCLDDGDSKVPPVV-QFTGHG--SSVVTTVKFSPIKGSQYLCSGDESGKV 90 (615)
T ss_dssp CCCTTCCCCCEEETTTTEEEEEE-TTEEEEEECCSSCCSSCSEE-EECTTT--TSCEEEEEECSSTTCCEEEEEETTSEE
T ss_pred CCccCceeEEEECCCCCEEEEec-CCeEEEEECCCCCCccccce-EEecCC--CceEEEEEECcCCCCCEEEEecCCCEE
Confidence 46889999999999999999998 789999999988 6665 899999 99 9999998 5899999999999
Q ss_pred EEEECCCC--------eEeEEEeecCCceEEEEEecCCCEEEEEeCC----CcEEEEEccCCcEEEEEecccccccEEEE
Q psy12614 94 NEYDMRRL--------NIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQ----GHINLFQISDEGLLYEKLLDRQQGRILCT 161 (708)
Q Consensus 94 ~vwd~~~~--------~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d----~~i~iwd~~~~~~~~~~~~~~~~~~v~~~ 161 (708)
++||+.++ +....+..|...|.+++|+|++++|++++.+ +.|++|| .++.. ..+.+|...|.++
T Consensus 91 ~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d--~~~~~--~~~~~~~~~v~~~ 166 (615)
T 1pgu_A 91 IVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWD--SGNSL--GEVSGHSQRINAC 166 (615)
T ss_dssp EEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETT--TCCEE--EECCSCSSCEEEE
T ss_pred EEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEE--CCCcc--eeeecCCccEEEE
Confidence 99999855 6778888999999999999999999999987 6788887 55555 6788999999999
Q ss_pred EECCCCC-EEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCce---eEEEEEEccC-CE-EEEEcCCCcEEEEeCCCC
Q psy12614 162 AWHSSGD-YLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNT---AVWCVAFCAD-FT-IITGDSGGFVRFWDGKTG 234 (708)
Q Consensus 162 ~~s~d~~-~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~---~v~~~~~~~~-~~-l~~~~~dg~i~~wd~~~~ 234 (708)
+|+|+++ .+++++.| .|++||+.+++.+..+... .. .|.+++|+|+ ++ +++++.||.|++||+.++
T Consensus 167 ~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~-------~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~ 239 (615)
T 1pgu_A 167 HLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTH-------HKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSG 239 (615)
T ss_dssp EECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSS-------SCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTC
T ss_pred EECCCCCcEEEEEeCCCcEEEEeCCCcceeeeeccc-------CCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCC
Confidence 9999998 89999999 9999999999888877633 66 8999999999 85 889999999999999999
Q ss_pred eeEEEe-e---ccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEecc----ccceE
Q psy12614 235 VQWSDV-K---THKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIH----EGDVK 306 (708)
Q Consensus 235 ~~~~~~-~---~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~----~~~v~ 306 (708)
+.+..+ . .|...|.+++|+ ++++|++++.|+.|++||+.+ ++ ....+..+ ...+.
T Consensus 240 ~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~--------~~--------~~~~~~~~~~~~~~~~~ 302 (615)
T 1pgu_A 240 EFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTT--------SK--------CVQKWTLDKQQLGNQQV 302 (615)
T ss_dssp CEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTT--------TE--------EEEEEECCTTCGGGCEE
T ss_pred CEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCC--------Cc--------EEEEEcCCCCcccCcee
Confidence 999998 6 899999999999 999999999999999999998 54 45555555 46788
Q ss_pred EEEEe-CCEEEEEcCCCeEEEEeCCCCc-eeecCccCCCCceEEEEcCCcEEEEEcCCeEEEEEecCCCCCCCCCCCCCC
Q psy12614 307 SLALH-GNRLYSGGLDSYLSLSYYPPKT-LVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTT 384 (708)
Q Consensus 307 ~l~~~-~~~l~s~~~d~~i~iw~~~~~~-~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~~~ 384 (708)
++.+. +..+++++.|+.+++||+.+.. +..+..+......+++ |+ ++..+.++.|++|++. .
T Consensus 303 ~~~~~~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~-~~--l~~~~~dg~i~~w~~~--~----------- 366 (615)
T 1pgu_A 303 GVVATGNGRIISLSLDGTLNFYELGHDEVLKTISGHNKGITALTV-NP--LISGSYDGRIMEWSSS--S----------- 366 (615)
T ss_dssp EEEEEETTEEEEEETTSCEEEEETTEEEEEEEECCCSSCEEEEET-TT--TEEEETTSCEEETTTT--E-----------
T ss_pred EEEeCCCCeEEEEECCCCEEEEECCCCcEEEEEeCCCCCEEEEEe-cC--cEEECCCCeEEEEEch--h-----------
Confidence 88887 9999999999999999998755 4455555667788888 87 5555799999999876 1
Q ss_pred cccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEE-EcCCceEEEEEEecCCcceeEEeecCCcccccceeEEEEEecC
Q psy12614 385 GVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAY-STESCVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVLISAD 463 (708)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~-~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~d 463 (708)
+ . ..|...|.+++| +++..+++ +.|+.+++|++...... ..+.+++|+|+
T Consensus 367 ----------~-~--~~~~~~v~~~~~-~~~~~l~~~~~d~~i~~~~~~~~~~~---------------~~~~~~~~s~~ 417 (615)
T 1pgu_A 367 ----------M-H--QDHSNLIVSLDN-SKAQEYSSISWDDTLKVNGITKHEFG---------------SQPKVASANND 417 (615)
T ss_dssp ----------E-E--CCCCSCEEEEEC-CSTTCCEEEETTTEEEETTEEEEECS---------------SCEEEEEECSS
T ss_pred ----------h-c--CcccCceEEEEE-CCCcEEEEEeCCCCEEEEEcccCccc---------------CCceEEEEcCC
Confidence 1 1 578899999999 55556666 66999999999862211 13445899999
Q ss_pred CCeEEEEecCCc--EEEecCCCeEEEEEecCCCCCccCcceEEEEECCCCcEEEEEec-CCeEEEEECCcee---eecCC
Q psy12614 464 STLLLAVSLNGP--LYIIDLSSLEIKYCVDPYKSNLMSDVISLVQMSECKQYIVCADR-KSHVVIWKNGQHH---ASLPR 537 (708)
Q Consensus 464 ~~~l~~~~~dg~--i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~-d~~i~iw~~~~~~---~~~~~ 537 (708)
+.+++++ .++. +|++..+ +.+..+.. ...+++++|+ +++|++++. |+.|++||+.+.. ..+.+
T Consensus 418 ~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~------~~~~~~~~~~--~~~l~~~~~~d~~i~~~~~~~~~~~~~~~~~ 486 (615)
T 1pgu_A 418 GFTAVLT-NDDDLLILQSFTG--DIIKSVRL------NSPGSAVSLS--QNYVAVGLEEGNTIQVFKLSDLEVSFDLKTP 486 (615)
T ss_dssp SEEEEEE-TTSEEEEEETTTC--CEEEEEEC------SSCEEEEEEC--SSEEEEEETTTSCEEEEETTEEEEEEECSSC
T ss_pred CCEEEEe-CCCceEEEeccCC--ceeeeccc------CCCceEEEEc--CCEEEEeecCCCeEEEEECCCccccccccCC
Confidence 9988887 4444 7776555 56666642 6689999999 899999999 9999999999433 56788
Q ss_pred CCCCceEEEEcCCCCEEEEEecCCcEEEEEcCCCCCCchhhhhhccCchhhhc-CCCCeeEEEeCC----------CCCc
Q psy12614 538 YRKPSTAMAIHPTLSTLVTVYSDHRIVEFDLNRKAFTTFSRKLETNHPNEWLS-RQLPVLGIEFDP----------QDSS 606 (708)
Q Consensus 538 ~~~~v~~l~~s~d~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~l~~s~----------~~~~ 606 (708)
|...|++++|+|++++|++++.||.|++||+.+++.. ..+.+ |...|.+++|+| ++++
T Consensus 487 ~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~-----------~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~ 555 (615)
T 1pgu_A 487 LRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVK-----------TSRWAFRTSKINAISWKPAEKGANEEEIEEDL 555 (615)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEE-----------ECCSCCCSSCEEEEEECCCC------CCSCCE
T ss_pred ccCceEEEEECCCCCEEEEcCCCCeEEEeeCCCCcce-----------eEeecCCCCceeEEEEcCccccccccccCCCE
Confidence 9999999999999999999999999999999988765 34555 999999999999 9999
Q ss_pred eEEEEcCeeEEEEecCCCC-CcccCccccCCCCCCCCCCCCCccccccceeeEEEecCcceEEEeecCCCcEEEEee
Q psy12614 607 LIYLMDDSALCVINKNKSL-AHADAKIPRLGPKVVSGDSSNSTHVIESKVAFHFVRRNKHLVYFGSLNDKEMLSVQV 682 (708)
Q Consensus 607 l~~~~~d~~i~~wd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 682 (708)
|++++.|+.|++||+.... +.... ..+......+.+.++.+ ++..+. ++.+.+++.
T Consensus 556 l~~~~~dg~i~iw~~~~~~~~~~~~-----------------~~h~~~v~~l~~s~~~~-l~s~~~--d~~v~iw~~ 612 (615)
T 1pgu_A 556 VATGSLDTNIFIYSVKRPMKIIKAL-----------------NAHKDGVNNLLWETPST-LVSSGA--DACIKRWNV 612 (615)
T ss_dssp EEEEETTSCEEEEESSCTTCCEEET-----------------TSSTTCEEEEEEEETTE-EEEEET--TSCEEEEEE
T ss_pred EEEEcCCCcEEEEECCCCceechhh-----------------hcCccceEEEEEcCCCC-eEEecC--CceEEEEee
Confidence 9999999999999997642 11110 01123355678888888 665543 666666653
|
| >2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-57 Score=507.41 Aligned_cols=567 Identities=11% Similarity=0.078 Sum_probs=421.0
Q ss_pred eeeeeeeeccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe-CCEEEEEcCCCc
Q psy12614 14 YGVHNIKFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF-NDRLFSGGLQGF 92 (708)
Q Consensus 14 ~~~~~~~~~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~-~~~l~s~~~d~~ 92 (708)
+..+.... .+|++.|++++|+|++++||+|+.||.|+|||..+.+... ...|. .+|.+++|+ +++|++++.|++
T Consensus 6 ~~~~~~~~-~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~--~~~~~--~~V~~l~fspg~~L~S~s~D~~ 80 (902)
T 2oaj_A 6 FSLAETNK-YGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVI--KLEDR--SAIKEMRFVKGIYLVVINAKDT 80 (902)
T ss_dssp EEEEEEEE-EECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEE--ECSSC--CCEEEEEEETTTEEEEEETTCE
T ss_pred eeeccccc-cCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEE--EcCCC--CCEEEEEEcCCCEEEEEECcCe
Confidence 44444433 4899999999999999999999999999999998766543 33566 899999999 889999999999
Q ss_pred EEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEE---------EecccccccEEEEEE
Q psy12614 93 VNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYE---------KLLDRQQGRILCTAW 163 (708)
Q Consensus 93 i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~---------~~~~~~~~~v~~~~~ 163 (708)
|++||+.+++++..+. |.+.|++++|+|++++|++|+.||.|++||+.+++.... ..+.+|.+.|.+++|
T Consensus 81 v~lWd~~~~~~~~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~ 159 (902)
T 2oaj_A 81 VYVLSLYSQKVLTTVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQW 159 (902)
T ss_dssp EEEEETTTCSEEEEEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEE
T ss_pred EEEEECCCCcEEEEEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEE
Confidence 9999999999988886 668999999999999999999999999999998876421 134678899999999
Q ss_pred CCC-CCEEEEecCC-eEEEEEcCCCceEEEEEeccc------------CCCCCceeEEEEEEccCCE-EEEEcCCCcEEE
Q psy12614 164 HSS-GDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKS------------SKFSKNTAVWCVAFCADFT-IITGDSGGFVRF 228 (708)
Q Consensus 164 s~d-~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~------------~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~ 228 (708)
+|+ +..|++++.| .| +||+++++.+..+..... .. .|...|.+++|+|+|+ +++++.||.|++
T Consensus 160 sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~h~~~V~~v~fspdg~~lasgs~Dg~i~l 237 (902)
T 2oaj_A 160 NPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNE-KRTPKVIQSLYHPNSLHIITIHEDNSLVF 237 (902)
T ss_dssp ETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTS-CBCCCEEEEEECTTSSEEEEEETTCCEEE
T ss_pred ccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCccccccccc-ccCCCeEEEEEcCCCCEEEEEECCCeEEE
Confidence 996 4788999999 99 999999998887753300 00 1247799999999995 999999999999
Q ss_pred EeCCCCeeEEE--e---ec-------------cccCeEEEEEe----CCC-CEEEEEecC-----CeEEEEEccCCcccc
Q psy12614 229 WDGKTGVQWSD--V---KT-------------HKKDILALTVS----EDE-NYLYCAGVD-----PTVVCFQRTRKPQVC 280 (708)
Q Consensus 229 wd~~~~~~~~~--~---~~-------------~~~~i~~~~~s----~~~-~~l~~~~~d-----g~i~iw~~~~~~~~~ 280 (708)
||+++++++.. + .. |...|.+++|+ |++ .+|++|+.+ +.+.+|++...+...
T Consensus 238 Wd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~~~~~~ 317 (902)
T 2oaj_A 238 WDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDLGYTPRYS 317 (902)
T ss_dssp EETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEEEECCCGG
T ss_pred EECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEecCCCCCcc
Confidence 99999987653 2 11 34579999996 443 467777665 378899853200000
Q ss_pred cC----------CCCCCCCcceEEeEEEe-ccccceEEEEEe------------CCEEEEEcCCCeEEEEeCCCCc-eee
Q psy12614 281 ST----------SGPEQGSSVWVRSVNRV-IHEGDVKSLALH------------GNRLYSGGLDSYLSLSYYPPKT-LVK 336 (708)
Q Consensus 281 ~~----------~g~~~~~~~~~~~~~~~-~~~~~v~~l~~~------------~~~l~s~~~d~~i~iw~~~~~~-~~~ 336 (708)
.. .++ ....+. .+.+.|..+.+. +..+++++.|+.|++|++.++. ...
T Consensus 318 ~~s~~~~~~~~~~~~--------~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~ 389 (902)
T 2oaj_A 318 ITSYEGMKNYYANPK--------QMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFTDK 389 (902)
T ss_dssp GCCHHHHHHHHHSCS--------EEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCEECC
T ss_pred ccchhhhhhhhcCcc--------ceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECCCCCcccc
Confidence 00 011 122222 356777777653 2378889999999999986553 111
Q ss_pred -------c----------------------------------CccCCCCceEEEEcCCcEEEEE-cCCeEEEEEecCCCC
Q psy12614 337 -------Y----------------------------------PCTLAQSTPVSLAKDIQHVLLQ-YTSHLELWSLGSAQS 374 (708)
Q Consensus 337 -------~----------------------------------~~~~~~~~~~~~s~~~~~l~~~-~~~~i~i~~~~~~~~ 374 (708)
+ .++......++++|++++++++ .|+.|++||+..+..
T Consensus 390 ~~~~~~~l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~laSgs~DgtVrlWd~~~g~~ 469 (902)
T 2oaj_A 390 ASLFPQNLSWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGTAFITGHSNGSVRIYDASHGDI 469 (902)
T ss_dssp GGGSCGGGTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEEEEEEEETTSEEEEEESSCCTT
T ss_pred cccCCCcccccCCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccccCcEEEEecCCCcEEEEECCCccc
Confidence 0 0111223346778999999985 899999999987641
Q ss_pred CCCCCCCCCCcccCCCCceEEEEEE------ecCCCceEEEEeCCCCcEEEEEc-CCceEEEEEEecCCc----------
Q psy12614 375 TDLSSHSNTTGVPLLSFPRLIVKMS------AVNNATIRCSVVSNDGKYVAYST-ESCVRLHSLDLDGDK---------- 437 (708)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~i~~~~~s~~g~~l~~~~-d~~i~i~~~~~~~~~---------- 437 (708)
......... .+|...|.+++|+|||++||+|. |++|+||++...+..
T Consensus 470 ----------------~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~ 533 (902)
T 2oaj_A 470 ----------------QDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIETGDVVLFKYEVNQFYSVENRPESGD 533 (902)
T ss_dssp ----------------TTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC-----------
T ss_pred ----------------cCCceEEeechhhcCCCCCCceeEEEecCCCCeEEEEecCcEEEEEEecCccccCccccCCCcc
Confidence 000111111 16788999999999999999965 999999999874210
Q ss_pred -----------------------------ceeEEeecCCcccccceeEEEEEecCCCeEEEEecCCc--EEEecCCCeEE
Q psy12614 438 -----------------------------PQISRIKNLPAPLFKSIFTHVLISADSTLLLAVSLNGP--LYIIDLSSLEI 486 (708)
Q Consensus 438 -----------------------------~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~~~~~dg~--i~~~~~~~~~~ 486 (708)
..++.+..+.+|.. .|++++||||| +||+++.|+. ||+++.. ..
T Consensus 534 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~--~V~svafSpdG-~lAsgs~D~tv~lwd~~~~--~~ 608 (902)
T 2oaj_A 534 LEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKG--KTSAINNSNIG-FVGIAYAAGSLMLIDRRGP--AI 608 (902)
T ss_dssp ----CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSC--SEEEEEECBTS-EEEEEETTSEEEEEETTTT--EE
T ss_pred cceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCC--cEEEEEecCCc-EEEEEeCCCcEEEEECCCC--eE
Confidence 00122333666755 78899999999 9999999998 8887665 44
Q ss_pred EE--EecCCC-CCccCcceEEEEEC-----CCC---cEEEEEecCCeEEEEEC---Cc--eeeecCCC-----CCCceEE
Q psy12614 487 KY--CVDPYK-SNLMSDVISLVQMS-----ECK---QYIVCADRKSHVVIWKN---GQ--HHASLPRY-----RKPSTAM 545 (708)
Q Consensus 487 ~~--~~~~~~-~~~~~~~i~~~~~s-----~~~---~~l~~~~~d~~i~iw~~---~~--~~~~~~~~-----~~~v~~l 545 (708)
+. .+.... +| ...|++++|+ ||| ++|++|+.|++|++||+ .+ ....+.+| .++|.++
T Consensus 609 ~~~~~~~~~~~gh--~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd~~p~~~g~~~~~~~~~~~~~~~~~v~~i 686 (902)
T 2oaj_A 609 IYMENIREISGAQ--SACVTCIEFVIMEYGDDGYSSILMVCGTDMGEVITYKILPASGGKFDVQLMDITNVTSKGPIHKI 686 (902)
T ss_dssp EEEEEGGGTCSSC--CCCEEEEEEEEEECTTSSSEEEEEEEEETTSEEEEEEEEECGGGCEEEEEEEEEECCSSCCCCEE
T ss_pred EEEeehhHhcccc--ccceEEEEEEEEecCCCCCcceEEEEEecCCcEEEEEEecCCCCcEEEEecCceecCCCCceEEE
Confidence 33 233443 77 8999999999 885 89999999999999999 43 33355444 5788888
Q ss_pred E-Ec----------------------CCCCEEEEEecCCcEEEEEcCCCCCCchhhhhhccCchhhhcCCCCeeEE---E
Q psy12614 546 A-IH----------------------PTLSTLVTVYSDHRIVEFDLNRKAFTTFSRKLETNHPNEWLSRQLPVLGI---E 599 (708)
Q Consensus 546 ~-~s----------------------~d~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l---~ 599 (708)
+ |+ +++.+|+++ +..|+||++.++++. +...+|...+.++ .
T Consensus 687 ~~~~~~~~~~~~a~~~~~~~l~~~~~~~~~~l~~~--~~~ir~~~~~~~k~~-----------~k~~~~~~~~~~v~~~~ 753 (902)
T 2oaj_A 687 DAFSKETKSSCLATIPKMQNLSKGLCIPGIVLITG--FDDIRLITLGKSKST-----------HKGFKYPLAATGLSYIS 753 (902)
T ss_dssp EEEETTTCCBCBCBHHHHHGGGGTCCCCEEEEEEC--SSEEEEECTTCCCEE-----------EEECSSCEEEEEEEEEE
T ss_pred EeEecCCCCcccCCHHHHhccCCCCCCCeEEEEEe--ccceEEEeCccccce-----------eeEcccceeeeEEEEEE
Confidence 7 66 444444433 778999999998765 2334566666776 5
Q ss_pred ------eCCCCCceEEEEcCeeEEEEecCCCCCcccCcc
Q psy12614 600 ------FDPQDSSLIYLMDDSALCVINKNKSLAHADAKI 632 (708)
Q Consensus 600 ------~s~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~ 632 (708)
|++++..|++++.||.|++|++....+....+.
T Consensus 754 ~~~~~~~~~~~~~l~~~~~~g~i~~~s~p~l~~~~~~~~ 792 (902)
T 2oaj_A 754 TVEKNNDRKNLTVIITLEINGHLRVFTIPDFKEQMSEHI 792 (902)
T ss_dssp EECSSSCEEEEEEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred eccccccccCceEEEEEeCCCcEEEEECcchHHHhhccC
Confidence 788999999999999999999976665544443
|
| >3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-56 Score=522.22 Aligned_cols=491 Identities=15% Similarity=0.211 Sum_probs=418.4
Q ss_pred eeeeccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe----CCEEEEEcCCCcE
Q psy12614 18 NIKFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF----NDRLFSGGLQGFV 93 (708)
Q Consensus 18 ~~~~~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~----~~~l~s~~~d~~i 93 (708)
.+..+.+|.+.|++++|+|++++||+|+.||.|+|||+.+++.+. .+.+|. ..|.+++|+ +..+++++.|+.|
T Consensus 649 ~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~-~~~~~~--~~v~~~~~~~~~~~~~l~sg~~d~~v 725 (1249)
T 3sfz_A 649 KLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVH-TYDEHS--EQVNCCHFTNKSNHLLLATGSNDFFL 725 (1249)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEE-EEECCS--SCEEEEEECSSSSCCEEEEEETTSCE
T ss_pred EEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEE-EEcCCC--CcEEEEEEecCCCceEEEEEeCCCeE
Confidence 345678999999999999999999999999999999999999887 899999 999999998 4589999999999
Q ss_pred EEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEE------------------------
Q psy12614 94 NEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEK------------------------ 149 (708)
Q Consensus 94 ~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~------------------------ 149 (708)
++||+.+++++..+.+|.+.|++++|+|++++|++++.||.|++||+.+++.....
T Consensus 726 ~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 805 (1249)
T 3sfz_A 726 KLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCS 805 (1249)
T ss_dssp EEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCC
T ss_pred EEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEE
Confidence 99999999999999999999999999999999999999999999999876543211
Q ss_pred -----------------------------ecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCC
Q psy12614 150 -----------------------------LLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSK 199 (708)
Q Consensus 150 -----------------------------~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~ 199 (708)
...+|...|.+++|+|+++++++++.+ .|++||+.++..+..+.
T Consensus 806 ~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~------ 879 (1249)
T 3sfz_A 806 WSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCR------ 879 (1249)
T ss_dssp BCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEEC------
T ss_pred ECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecC------
Confidence 112677889999999999999999999 99999999998887776
Q ss_pred CCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCee-----------------------------EEE--------ee
Q psy12614 200 FSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQ-----------------------------WSD--------VK 241 (708)
Q Consensus 200 ~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~-----------------------------~~~--------~~ 241 (708)
+|...|.+++|+|+|. +++++.||.|++||+.++.. +.. ..
T Consensus 880 -~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 958 (1249)
T 3sfz_A 880 -GHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDY 958 (1249)
T ss_dssp -CCSSCEEEEEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEE
T ss_pred -CCccceEEEEECCCCCEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEE
Confidence 3488999999999995 99999999999999653100 000 01
Q ss_pred ccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEEEc
Q psy12614 242 THKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSGG 319 (708)
Q Consensus 242 ~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~~ 319 (708)
.+...+.+++|+|+++++++|+.+|.|++|++.+ ++ ....+.+|...|.+++|+ ++++++++
T Consensus 959 ~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~--------~~--------~~~~~~~h~~~v~~l~~s~dg~~l~s~~ 1022 (1249)
T 3sfz_A 959 LPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPN--------NR--------VFSSGVGHKKAVRHIQFTADGKTLISSS 1022 (1249)
T ss_dssp ECCSCEEEEEECTTSSEEEEEETTSCCEEEETTT--------TS--------CEEECCCCSSCCCCEEECSSSSCEEEEC
T ss_pred cccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCC--------Cc--------eeeecccCCCceEEEEECCCCCEEEEEc
Confidence 2356789999999999999999999999999998 65 456778999999999999 88999999
Q ss_pred CCCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEEEcCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEE
Q psy12614 320 LDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMS 399 (708)
Q Consensus 320 ~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (708)
.|+.|++|++.++.......+......++++|++.+++.+.++.+++||+.++. .....
T Consensus 1023 ~dg~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~v~vwd~~~~~---------------------~~~~~ 1081 (1249)
T 3sfz_A 1023 EDSVIQVWNWQTGDYVFLQAHQETVKDFRLLQDSRLLSWSFDGTVKVWNVITGR---------------------IERDF 1081 (1249)
T ss_dssp SSSBEEEEETTTTEEECCBCCSSCEEEEEECSSSEEEEEESSSEEEEEETTTTC---------------------CCEEE
T ss_pred CCCEEEEEECCCCceEEEecCCCcEEEEEEcCCCcEEEEECCCcEEEEECCCCc---------------------eeEEE
Confidence 999999999999887766656667788999999998888999999999998866 23344
Q ss_pred ecCCCceEEEEeCCCCcEEEEEc-CCceEEEEEEecCCcceeEEeecCCcccccceeEEEEEecCCCeEEEEecCCc--E
Q psy12614 400 AVNNATIRCSVVSNDGKYVAYST-ESCVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVLISADSTLLLAVSLNGP--L 476 (708)
Q Consensus 400 ~~~~~~i~~~~~s~~g~~l~~~~-d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~~~~~dg~--i 476 (708)
..|...|.+++|+|+|++++++. |++|++|++..... + ..+.+|.. .|++++|+|||++|++++.||. +
T Consensus 1082 ~~~~~~v~~~~~s~d~~~l~s~s~d~~v~iwd~~~~~~---~---~~l~~h~~--~v~~~~~s~dg~~lat~~~dg~i~v 1153 (1249)
T 3sfz_A 1082 TCHQGTVLSCAISSDATKFSSTSADKTAKIWSFDLLSP---L---HELKGHNG--CVRCSAFSLDGILLATGDDNGEIRI 1153 (1249)
T ss_dssp ECCSSCCCCEEECSSSSSCEEECCSSCCCEECSSSSSC---S---BCCCCCSS--CEEEEEECSSSSEEEEEETTSCCCE
T ss_pred cccCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCcce---e---eeeccCCC--cEEEEEECCCCCEEEEEeCCCEEEE
Confidence 57889999999999999999865 99999999986332 1 12566655 7888999999999999999998 9
Q ss_pred EEecCCCeEEEEEe------cCCCCCccCcceEEEEECCCCcEEEEEecCCeEEEEECCcee--eecCCCCCCceEEEEc
Q psy12614 477 YIIDLSSLEIKYCV------DPYKSNLMSDVISLVQMSECKQYIVCADRKSHVVIWKNGQHH--ASLPRYRKPSTAMAIH 548 (708)
Q Consensus 477 ~~~~~~~~~~~~~~------~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~--~~~~~~~~~v~~l~~s 548 (708)
|++.++. .+..+ ....+| ...|++++|+|||++|++++ |.|++||+.+.. ..+..|...|++++|+
T Consensus 1154 wd~~~~~--~~~~~~~~~~~~~~~~~--~~~v~~l~fs~dg~~l~s~~--g~v~vwd~~~g~~~~~~~~~~~~i~~~~~s 1227 (1249)
T 3sfz_A 1154 WNVSDGQ--LLHSCAPISVEEGTATH--GGWVTDVCFSPDSKTLVSAG--GYLKWWNVATGDSSQTFYTNGTNLKKIHVS 1227 (1249)
T ss_dssp EESSSSC--CCCCCCCCC-------C--CSCCCEEEECTTSSCEEEES--SSEEEBCSSSCBCCCCCCCSSCCCCCCEEC
T ss_pred EECCCCc--eEEEecccccccccccc--CceEEEEEECCCCCEEEECC--CeEEEEECCCCceeeeeeccCCcccEEEEC
Confidence 9998773 33222 112345 78899999999999999885 899999999544 3778899999999999
Q ss_pred CCCCEEEEEecCCcEEEEEcC
Q psy12614 549 PTLSTLVTVYSDHRIVEFDLN 569 (708)
Q Consensus 549 ~d~~~l~~~~~dg~i~vwd~~ 569 (708)
||+++|++++.||.|++|++.
T Consensus 1228 ~dg~~l~~~~~dg~v~vw~l~ 1248 (1249)
T 3sfz_A 1228 PDFRTYVTVDNLGILYILQVL 1248 (1249)
T ss_dssp SSSCCEEEECTTCCEEEECCC
T ss_pred CCCCEEEEecCCcEEEEEeec
Confidence 999999999999999999975
|
| >2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-51 Score=457.66 Aligned_cols=514 Identities=11% Similarity=0.061 Sum_probs=371.6
Q ss_pred EEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEcc
Q psy12614 64 VFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQIS 141 (708)
Q Consensus 64 ~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~ 141 (708)
...||. ..|++++|+ +++||+|+.||+|++||..+.+....+ .|...|.+++|+| +++|++++.|+.|++||+.
T Consensus 12 ~~~gh~--~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~-~~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~ 87 (902)
T 2oaj_A 12 NKYGMS--SKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKL-EDRSAIKEMRFVK-GIYLVVINAKDTVYVLSLY 87 (902)
T ss_dssp EEEECS--SCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEEC-SSCCCEEEEEEET-TTEEEEEETTCEEEEEETT
T ss_pred cccCCC--CCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEEc-CCCCCEEEEEEcC-CCEEEEEECcCeEEEEECC
Confidence 455888 999999999 899999999999999999988776654 4788999999999 8899999999999999999
Q ss_pred CCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEec------ccCCCCCceeEEEEEEccC
Q psy12614 142 DEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLD------KSSKFSKNTAVWCVAFCAD 214 (708)
Q Consensus 142 ~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~------~~~~~~~~~~v~~~~~~~~ 214 (708)
+++.. ..+. |.+.|.+++|+|++++|++|+.| .|++||+.+++.. .+... .... +|...|.+++|+|+
T Consensus 88 ~~~~~--~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~-~~~i~~~~~~~~~~~-~h~~~V~sl~~sp~ 162 (902)
T 2oaj_A 88 SQKVL--TTVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLS-SFKLDNLQKSSFFPA-ARLSPIVSIQWNPR 162 (902)
T ss_dssp TCSEE--EEEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEE-EEEECCHHHHHTCSS-SCCCCCCEEEEETT
T ss_pred CCcEE--EEEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccc-cceeccccccccccc-cCCCCeEEEEEccC
Confidence 99876 4443 66889999999999999999999 9999999988763 22210 0011 44789999999997
Q ss_pred C--EEEEEcCCCcEEEEeCCCCeeEEEeecc------------------ccCeEEEEEeCCCCEEEEEecCCeEEEEEcc
Q psy12614 215 F--TIITGDSGGFVRFWDGKTGVQWSDVKTH------------------KKDILALTVSEDENYLYCAGVDPTVVCFQRT 274 (708)
Q Consensus 215 ~--~l~~~~~dg~i~~wd~~~~~~~~~~~~~------------------~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~ 274 (708)
+ .+++|+.||.| +||+++++.+..+..| ...|.+++|+|+|++|++++.||.|++||+.
T Consensus 163 ~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~ 241 (902)
T 2oaj_A 163 DIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDAN 241 (902)
T ss_dssp EEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETT
T ss_pred CCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECC
Confidence 4 58999999999 9999999988887755 4779999999999999999999999999998
Q ss_pred CCcccccCCCCCCCCcceEEeEE--E---e-------------ccccceEEEEEe-------CCEEEEEcCC-----CeE
Q psy12614 275 RKPQVCSTSGPEQGSSVWVRSVN--R---V-------------IHEGDVKSLALH-------GNRLYSGGLD-----SYL 324 (708)
Q Consensus 275 ~~~~~~~~~g~~~~~~~~~~~~~--~---~-------------~~~~~v~~l~~~-------~~~l~s~~~d-----~~i 324 (708)
+ ++ .... + . .|...|.+++|+ +.++++|+.| ..+
T Consensus 242 ~--------g~--------~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v 305 (902)
T 2oaj_A 242 S--------GH--------MIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSL 305 (902)
T ss_dssp T--------CC--------EEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCE
T ss_pred C--------Cc--------EEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceE
Confidence 8 54 2211 1 1 134579999995 1467777665 378
Q ss_pred EEEeCCC------------------Cc-eeecC-ccCCCCceEEEEc----------CCcE-EEEEcCCeEEEEEecCCC
Q psy12614 325 SLSYYPP------------------KT-LVKYP-CTLAQSTPVSLAK----------DIQH-VLLQYTSHLELWSLGSAQ 373 (708)
Q Consensus 325 ~iw~~~~------------------~~-~~~~~-~~~~~~~~~~~s~----------~~~~-l~~~~~~~i~i~~~~~~~ 373 (708)
.+|++.. .. .+.+. .+......+.+.+ +... ++.+.++.+++|++.++.
T Consensus 306 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~ 385 (902)
T 2oaj_A 306 TMIDLGYTPRYSITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSGI 385 (902)
T ss_dssp EEEEEEECCCGGGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCC
T ss_pred EEEecCCCCCccccchhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECCCCC
Confidence 8888521 11 11111 0122233444433 2334 444688999999986653
Q ss_pred C-CC-CCCCCCCCcccCCCCceEEEE---------------------EEecCCCceEEEEeCCCCcEEEEEc-CCceEEE
Q psy12614 374 S-TD-LSSHSNTTGVPLLSFPRLIVK---------------------MSAVNNATIRCSVVSNDGKYVAYST-ESCVRLH 429 (708)
Q Consensus 374 ~-~~-~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~i~~~~~s~~g~~l~~~~-d~~i~i~ 429 (708)
. .. ...+ ..+ ........... ...+|...+.+++|+|+|++|+++. |++|++|
T Consensus 386 ~~~~~~~~~--~~l-~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~laSgs~DgtVrlW 462 (902)
T 2oaj_A 386 FTDKASLFP--QNL-SWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGTAFITGHSNGSVRIY 462 (902)
T ss_dssp EECCGGGSC--GGG-TTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEEEEEEEETTSEEEEE
T ss_pred cccccccCC--Ccc-cccCCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccccCcEEEEecCCCcEEEE
Confidence 1 00 0000 000 00001111111 1234556677789999999999955 9999999
Q ss_pred EEEecCCcc-eeEEeecC-----CcccccceeEEEEEecCCCeEEEEecCCc--EEEecCCCe----------E------
Q psy12614 430 SLDLDGDKP-QISRIKNL-----PAPLFKSIFTHVLISADSTLLLAVSLNGP--LYIIDLSSL----------E------ 485 (708)
Q Consensus 430 ~~~~~~~~~-~~~~~~~~-----~~~~~~~~i~~~~~s~d~~~l~~~~~dg~--i~~~~~~~~----------~------ 485 (708)
|+..+.... ....+. + .+|. ..|++++|+|||++||+++.||. ||++..+.. .
T Consensus 463 d~~~g~~~~~~~~~~~-l~~~~~~~h~--~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~ 539 (902)
T 2oaj_A 463 DASHGDIQDNASFEVN-LSRTLNKAKE--LAVDKISFAAETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFR 539 (902)
T ss_dssp ESSCCTTTTTBCEEEE-HHHHTTCSSS--CCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC---------------CC
T ss_pred ECCCccccCCceEEee-chhhcCCCCC--CceeEEEecCCCCeEEEEecCcEEEEEEecCccccCccccCCCcccceeee
Confidence 998742110 001100 1 1343 37888999999999999999999 999976521 0
Q ss_pred ------------------------EEEEecCCCCCccCcceEEEEECCCCcEEEEEecCCeEEEEECCceee-------e
Q psy12614 486 ------------------------IKYCVDPYKSNLMSDVISLVQMSECKQYIVCADRKSHVVIWKNGQHHA-------S 534 (708)
Q Consensus 486 ------------------------~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~-------~ 534 (708)
....+....+| ...|++++||||| +||+|+.|++|+|||+..... .
T Consensus 540 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h--~~~V~svafSpdG-~lAsgs~D~tv~lwd~~~~~~~~~~~~~~ 616 (902)
T 2oaj_A 540 RFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHAN--KGKTSAINNSNIG-FVGIAYAAGSLMLIDRRGPAIIYMENIRE 616 (902)
T ss_dssp SCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCC--SCSEEEEEECBTS-EEEEEETTSEEEEEETTTTEEEEEEEGGG
T ss_pred eccccCCccccccccccCCCCCCCccceeEEEEcC--CCcEEEEEecCCc-EEEEEeCCCcEEEEECCCCeEEEEeehhH
Confidence 01122333456 8899999999999 999999999999999984322 3
Q ss_pred cC-CCCCCceEEEEc-----CCC---CEEEEEecCCcEEEEEc---CCCCCCchhhhhhccCchhhhcC-----CCCeeE
Q psy12614 535 LP-RYRKPSTAMAIH-----PTL---STLVTVYSDHRIVEFDL---NRKAFTTFSRKLETNHPNEWLSR-----QLPVLG 597 (708)
Q Consensus 535 ~~-~~~~~v~~l~~s-----~d~---~~l~~~~~dg~i~vwd~---~~~~~~~~~~~~~~~~~~~~~~~-----~~~i~~ 597 (708)
+. +|.+.|++++|+ ||| ++|++++.|++|++||+ .+|++. ..+.+| .++|.+
T Consensus 617 ~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd~~p~~~g~~~-----------~~~~~~~~~~~~~~v~~ 685 (902)
T 2oaj_A 617 ISGAQSACVTCIEFVIMEYGDDGYSSILMVCGTDMGEVITYKILPASGGKFD-----------VQLMDITNVTSKGPIHK 685 (902)
T ss_dssp TCSSCCCCEEEEEEEEEECTTSSSEEEEEEEEETTSEEEEEEEEECGGGCEE-----------EEEEEEEECCSSCCCCE
T ss_pred hccccccceEEEEEEEEecCCCCCcceEEEEEecCCcEEEEEEecCCCCcEE-----------EEecCceecCCCCceEE
Confidence 43 899999999999 886 89999999999999999 666644 233333 567877
Q ss_pred EE-eC----------------------CCCCceEEEEcCeeEEEEecCCCC
Q psy12614 598 IE-FD----------------------PQDSSLIYLMDDSALCVINKNKSL 625 (708)
Q Consensus 598 l~-~s----------------------~~~~~l~~~~~d~~i~~wd~~~~~ 625 (708)
++ |+ +++..| ++.+..|++|++....
T Consensus 686 i~~~~~~~~~~~~a~~~~~~~l~~~~~~~~~~l--~~~~~~ir~~~~~~~k 734 (902)
T 2oaj_A 686 IDAFSKETKSSCLATIPKMQNLSKGLCIPGIVL--ITGFDDIRLITLGKSK 734 (902)
T ss_dssp EEEEETTTCCBCBCBHHHHHGGGGTCCCCEEEE--EECSSEEEEECTTCCC
T ss_pred EEeEecCCCCcccCCHHHHhccCCCCCCCeEEE--EEeccceEEEeCcccc
Confidence 77 65 344333 3337789999997643
|
| >3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-51 Score=461.98 Aligned_cols=473 Identities=11% Similarity=0.141 Sum_probs=383.7
Q ss_pred eeeeeeeccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCc
Q psy12614 15 GVHNIKFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGF 92 (708)
Q Consensus 15 ~~~~~~~~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~ 92 (708)
+++..+.+.+|++.|++++|+|++++||+|+.||.|+|||+.+++.+. .+.+|. .+|.+++|+ +++|++++.||.
T Consensus 2 ~l~~~~~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~-~~~~~~--~~v~~~~~s~~~~~l~~~~~dg~ 78 (814)
T 3mkq_A 2 KLDIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVR-SIQVTE--TPVRAGKFIARKNWIIVGSDDFR 78 (814)
T ss_dssp CCCCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEE-EEECCS--SCEEEEEEEGGGTEEEEEETTSE
T ss_pred CcccceeeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEE-EEecCC--CcEEEEEEeCCCCEEEEEeCCCe
Confidence 455667889999999999999999999999999999999999988876 888999 999999999 999999999999
Q ss_pred EEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECC-CCCEEE
Q psy12614 93 VNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHS-SGDYLV 171 (708)
Q Consensus 93 i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~-d~~~l~ 171 (708)
|++||+.+++.+..+.+|.+.|++++|+|++++|++++.||.|++||+.++... ...+.+|...|.+++|+| +++.|+
T Consensus 79 i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~-~~~~~~~~~~v~~~~~~p~~~~~l~ 157 (814)
T 3mkq_A 79 IRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWAL-EQTFEGHEHFVMCVAFNPKDPSTFA 157 (814)
T ss_dssp EEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEE-EEEEECCSSCEEEEEEETTEEEEEE
T ss_pred EEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceE-EEEEcCCCCcEEEEEEEcCCCCEEE
Confidence 999999999999999999999999999999999999999999999999987332 167788999999999999 889999
Q ss_pred EecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEcc--CCE-EEEEcCCCcEEEEeCCCCeeEEEeeccccCe
Q psy12614 172 TGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCA--DFT-IITGDSGGFVRFWDGKTGVQWSDVKTHKKDI 247 (708)
Q Consensus 172 ~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~-l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i 247 (708)
+++.| .|++||+.++.....+...+ ...+.+++|+| ++. +++++.+|.|++||+.+++.+..+.+|...|
T Consensus 158 ~~~~dg~v~vwd~~~~~~~~~~~~~~------~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v 231 (814)
T 3mkq_A 158 SGCLDRTVKVWSLGQSTPNFTLTTGQ------ERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNV 231 (814)
T ss_dssp EEETTSEEEEEETTCSSCSEEEECCC------TTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECCSSCE
T ss_pred EEeCCCeEEEEECCCCcceeEEecCC------CCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCCCCCE
Confidence 99999 99999999888877776542 57899999999 774 9999999999999999999999999999999
Q ss_pred EEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CC-EEEEEcCCCeE
Q psy12614 248 LALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GN-RLYSGGLDSYL 324 (708)
Q Consensus 248 ~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~-~l~s~~~d~~i 324 (708)
.+++|+|++++|++++.||.|++||+.+ ++ ....+..|...+.+++|+ +. .+++++.++.+
T Consensus 232 ~~~~~~~~~~~l~~~~~dg~v~vwd~~~--------~~--------~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 295 (814)
T 3mkq_A 232 SFAVFHPTLPIIISGSEDGTLKIWNSST--------YK--------VEKTLNVGLERSWCIATHPTGRKNYIASGFDNGF 295 (814)
T ss_dssp EEEEECSSSSEEEEEETTSCEEEEETTT--------CS--------EEEEECCSSSSEEEEEECTTCGGGEEEEEETTEE
T ss_pred EEEEEcCCCCEEEEEeCCCeEEEEECCC--------Cc--------EEEEeecCCCcEEEEEEccCCCceEEEEEeCCCE
Confidence 9999999999999999999999999998 66 677888899999999999 33 24555567778
Q ss_pred EEEeCCCCceeecCccCCCCceEEEEcCCcEEEEEcCC----eEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEe
Q psy12614 325 SLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTS----HLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSA 400 (708)
Q Consensus 325 ~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~----~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (708)
.+|++.. ....+.++|+++.++++... .+..-.+..... -..+. ..........
T Consensus 296 ~~~~~~~-----------~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~-------~~~~~~~~~~ 353 (814)
T 3mkq_A 296 TVLSLGN-----------DEPTLSLDPVGKLVWSGGKNAAASDIFTAVIRGNEE----VEQDE-------PLSLQTKELG 353 (814)
T ss_dssp EEEECSC-----------CSCCEEECSSSEEEEECCTTSCTTCEEEEECCSCCC----CCSSS-------CBCCCCEEEC
T ss_pred EEEEcCC-----------CCceeEECCCCCEEEECcccccceeeeeeecccccc----cccCc-------cceeeeecCC
Confidence 8888743 34568889999988875222 121111111000 00000 0011112233
Q ss_pred cCCCceEEEEeCCCCcEEEEEcCCceEEEEEEecCCcceeEEeecCCcccccceeEEEEEecCCCeEEEEecCCc--EEE
Q psy12614 401 VNNATIRCSVVSNDGKYVAYSTESCVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVLISADSTLLLAVSLNGP--LYI 478 (708)
Q Consensus 401 ~~~~~i~~~~~s~~g~~l~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~~~~~dg~--i~~ 478 (708)
.+...+.+++|+|+|++++++.++.+.+|++.. .... + ...+++++|+||++++++++.++. +|+
T Consensus 354 ~~~~~~~~~~~spdg~~la~~~~~~~~i~~~~~----~~~~-------~--~~~i~~~~~spdg~~la~~~~~g~v~l~~ 420 (814)
T 3mkq_A 354 SVDVFPQSLAHSPNGRFVTVVGDGEYVIYTALA----WRNK-------A--FGKCQDFVWGPDSNSYALIDETGQIKYYK 420 (814)
T ss_dssp CCSSCCSEEEECTTSSEEEEEETTEEEEEETTT----TEEE-------E--EEECSEEEECTTSSCEEEECTTCCEEEEE
T ss_pred CCccCCceeEECCCCCEEEEecCCEEEEEECcc----cccc-------C--CCceEEEEEeCCCCeEEEEeCCCcEEEEE
Confidence 456678999999999999998899999999642 1111 1 125666999999999999999998 553
Q ss_pred ecCCCeEEEEEecCCCCCccCcceEEEEECCCC---cEEEEEecCCeEEEEECCc--eeeecCCCCCCceEEEEcCCCCE
Q psy12614 479 IDLSSLEIKYCVDPYKSNLMSDVISLVQMSECK---QYIVCADRKSHVVIWKNGQ--HHASLPRYRKPSTAMAIHPTLST 553 (708)
Q Consensus 479 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~---~~l~~~~~d~~i~iw~~~~--~~~~~~~~~~~v~~l~~s~d~~~ 553 (708)
...+| ...+.+++|+|++ .+|++++.|+.|++||+.+ ....+..|.. .++|+|||++
T Consensus 421 -------------~~~~~--~~~v~~~~~s~dg~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~---~v~~s~dg~~ 482 (814)
T 3mkq_A 421 -------------NFKEV--TSWSVPMHSAIDRLFSGALLGVKSDGFVYFFDWDNGTLVRRIDVNAK---DVIWSDNGEL 482 (814)
T ss_dssp -------------TTEEC--TTCCCCCSSCCCEEECSSSEEEEETTEEEEECTTTCCEEEEESSCEE---EEEECTTSSE
T ss_pred -------------CCCCc--cceEEcCCcCccceecceEEEEecCCEEEEEECCcCcEEEEEecCCC---EEEEcCCCCE
Confidence 11233 5678889999998 6889999999999999984 3446666664 9999999999
Q ss_pred EEEE------ecCCcEEEE
Q psy12614 554 LVTV------YSDHRIVEF 566 (708)
Q Consensus 554 l~~~------~~dg~i~vw 566 (708)
|+++ +.++.+.+|
T Consensus 483 la~~~~~~~~~~~~~~~~~ 501 (814)
T 3mkq_A 483 VMIVNTNSNGDEASGYTLL 501 (814)
T ss_dssp EEEEECCCSSCSCSEEEEE
T ss_pred EEEEEcCcccCCceEEEEE
Confidence 9999 555544443
|
| >3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-48 Score=440.22 Aligned_cols=462 Identities=15% Similarity=0.164 Sum_probs=375.3
Q ss_pred EEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEc
Q psy12614 63 RVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQI 140 (708)
Q Consensus 63 ~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~ 140 (708)
+.+.+|. +.|.+++|+ +++|++++.||.|++||+.+++.+..+.+|.+.|.+++|+|++++|++++.||.|++||+
T Consensus 7 ~~~~~h~--~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~ 84 (814)
T 3mkq_A 7 KTFSNRS--DRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNY 84 (814)
T ss_dssp EEEEEEC--SCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEET
T ss_pred eeeecCC--CceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEEC
Confidence 4889999 999999999 999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCc-eEEEEEecccCCCCCceeEEEEEEcc-CCE-
Q psy12614 141 SDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGH-AIHKMSLDKSSKFSKNTAVWCVAFCA-DFT- 216 (708)
Q Consensus 141 ~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~- 216 (708)
.+++.. ..+.+|.+.|.+++|+|++++|++++.| .|++||+.++. ....+. .+...|.+++|+| ++.
T Consensus 85 ~~~~~~--~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~-------~~~~~v~~~~~~p~~~~~ 155 (814)
T 3mkq_A 85 NTGEKV--VDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFE-------GHEHFVMCVAFNPKDPST 155 (814)
T ss_dssp TTCCEE--EEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEE-------CCSSCEEEEEEETTEEEE
T ss_pred CCCcEE--EEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEc-------CCCCcEEEEEEEcCCCCE
Confidence 999887 6788899999999999999999999999 99999999874 444443 3378899999999 664
Q ss_pred EEEEcCCCcEEEEeCCCCeeEEEeeccc-cCeEEEEEeC--CCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceE
Q psy12614 217 IITGDSGGFVRFWDGKTGVQWSDVKTHK-KDILALTVSE--DENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWV 293 (708)
Q Consensus 217 l~~~~~dg~i~~wd~~~~~~~~~~~~~~-~~i~~~~~s~--~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~ 293 (708)
+++++.||.|++||+.+++....+..+. ..+.+++|+| ++++|++++.||.|++||+.+ ++
T Consensus 156 l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~--------~~-------- 219 (814)
T 3mkq_A 156 FASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQT--------KS-------- 219 (814)
T ss_dssp EEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTT--------TE--------
T ss_pred EEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCC--------Cc--------
Confidence 8999999999999999888777776554 8999999999 999999999999999999988 65
Q ss_pred EeEEEeccccceEEEEEe--CCEEEEEcCCCeEEEEeCCCCc-eeecCccCCCCceEEEEcCCc--EEEEEcCCeEEEEE
Q psy12614 294 RSVNRVIHEGDVKSLALH--GNRLYSGGLDSYLSLSYYPPKT-LVKYPCTLAQSTPVSLAKDIQ--HVLLQYTSHLELWS 368 (708)
Q Consensus 294 ~~~~~~~~~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~~~-~~~~~~~~~~~~~~~~s~~~~--~l~~~~~~~i~i~~ 368 (708)
....+.+|...|.+++|+ +.++++++.||.|++||+.+.. ...+..+......++++|++. +++++.++.+.+|+
T Consensus 220 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (814)
T 3mkq_A 220 CVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVLS 299 (814)
T ss_dssp EEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCSEEEEECCSSSSEEEEEECTTCGGGEEEEEETTEEEEEE
T ss_pred EEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCcEEEEEEccCCCceEEEEEeCCCEEEEE
Confidence 567788899999999999 7899999999999999999866 444444455678899999987 67788999999999
Q ss_pred ecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEEEc-CC-ceEEEEEEec------CCccee
Q psy12614 369 LGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYST-ES-CVRLHSLDLD------GDKPQI 440 (708)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~-d~-~i~i~~~~~~------~~~~~~ 440 (708)
+.... ..++++|+|+.++++. +. ...++..... ......
T Consensus 300 ~~~~~---------------------------------~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (814)
T 3mkq_A 300 LGNDE---------------------------------PTLSLDPVGKLVWSGGKNAAASDIFTAVIRGNEEVEQDEPLS 346 (814)
T ss_dssp CSCCS---------------------------------CCEEECSSSEEEEECCTTSCTTCEEEEECCSCCCCCSSSCBC
T ss_pred cCCCC---------------------------------ceeEECCCCCEEEECcccccceeeeeeecccccccccCccce
Confidence 87643 2467889999998854 22 1222222110 000000
Q ss_pred EEeecCCcccccceeEEEEEecCCCeEEEEecCCc--EEEecCCCeEEEEEecCCCCCccCcceEEEEECCCCcEEEEEe
Q psy12614 441 SRIKNLPAPLFKSIFTHVLISADSTLLLAVSLNGP--LYIIDLSSLEIKYCVDPYKSNLMSDVISLVQMSECKQYIVCAD 518 (708)
Q Consensus 441 ~~~~~~~~~~~~~~i~~~~~s~d~~~l~~~~~dg~--i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~ 518 (708)
.....+..+ ...+++++|+|+|+++++++ ++. +|++... .... ...+.+++|+|++++||+++
T Consensus 347 ~~~~~~~~~--~~~~~~~~~spdg~~la~~~-~~~~~i~~~~~~--~~~~----------~~~i~~~~~spdg~~la~~~ 411 (814)
T 3mkq_A 347 LQTKELGSV--DVFPQSLAHSPNGRFVTVVG-DGEYVIYTALAW--RNKA----------FGKCQDFVWGPDSNSYALID 411 (814)
T ss_dssp CCCEEECCC--SSCCSEEEECTTSSEEEEEE-TTEEEEEETTTT--EEEE----------EEECSEEEECTTSSCEEEEC
T ss_pred eeeecCCCC--ccCCceeEECCCCCEEEEec-CCEEEEEECccc--cccC----------CCceEEEEEeCCCCeEEEEe
Confidence 000001222 22466799999999999988 566 7776543 1111 34678999999999999999
Q ss_pred cCCeEEEEECCceeeecCCCCCCceEEEEcCCC---CEEEEEecCCcEEEEEcCCCCCCchhhhhhccCchhhhcCCCCe
Q psy12614 519 RKSHVVIWKNGQHHASLPRYRKPSTAMAIHPTL---STLVTVYSDHRIVEFDLNRKAFTTFSRKLETNHPNEWLSRQLPV 595 (708)
Q Consensus 519 ~d~~i~iw~~~~~~~~~~~~~~~v~~l~~s~d~---~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i 595 (708)
.++.|++|+ .+.+|...+.+++|+|++ +.|++++.|+.|++||+.+++.. ..+..|..
T Consensus 412 ~~g~v~l~~------~~~~~~~~v~~~~~s~dg~~~~~l~~~~~d~~v~~~d~~~~~~~-----------~~~~~~~~-- 472 (814)
T 3mkq_A 412 ETGQIKYYK------NFKEVTSWSVPMHSAIDRLFSGALLGVKSDGFVYFFDWDNGTLV-----------RRIDVNAK-- 472 (814)
T ss_dssp TTCCEEEEE------TTEECTTCCCCCSSCCCEEECSSSEEEEETTEEEEECTTTCCEE-----------EEESSCEE--
T ss_pred CCCcEEEEE------CCCCccceEEcCCcCccceecceEEEEecCCEEEEEECCcCcEE-----------EEEecCCC--
Confidence 999999996 345677889999999998 68999999999999999988765 33444433
Q ss_pred eEEEeCCCCCceEEE------EcCeeEEEE
Q psy12614 596 LGIEFDPQDSSLIYL------MDDSALCVI 619 (708)
Q Consensus 596 ~~l~~s~~~~~l~~~------~~d~~i~~w 619 (708)
.++|+|||++|+++ +.+..+.+|
T Consensus 473 -~v~~s~dg~~la~~~~~~~~~~~~~~~~~ 501 (814)
T 3mkq_A 473 -DVIWSDNGELVMIVNTNSNGDEASGYTLL 501 (814)
T ss_dssp -EEEECTTSSEEEEEECCCSSCSCSEEEEE
T ss_pred -EEEEcCCCCEEEEEEcCcccCCceEEEEE
Confidence 89999999999999 555544444
|
| >1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-44 Score=368.41 Aligned_cols=282 Identities=13% Similarity=0.231 Sum_probs=264.3
Q ss_pred eeccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEE
Q psy12614 20 KFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYD 97 (708)
Q Consensus 20 ~~~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd 97 (708)
..+.+|.+.|++++|+|++++||+|+.||+|+|||+.+++... .+.+|. ..|.+++|+ +++|++|+.|++|++||
T Consensus 102 ~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~-~l~~h~--~~V~~v~~~~~~~~l~sgs~D~~i~iwd 178 (410)
T 1vyh_C 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFER-TLKGHT--DSVQDISFDHSGKLLASCSADMTIKLWD 178 (410)
T ss_dssp CEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCE-EECCCS--SCEEEEEECTTSSEEEEEETTSCCCEEE
T ss_pred EeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEE-EEeccC--CcEEEEEEcCCCCEEEEEeCCCeEEEEe
Confidence 4577999999999999999999999999999999999998876 899999 999999999 89999999999999999
Q ss_pred CCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-
Q psy12614 98 MRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA- 176 (708)
Q Consensus 98 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d- 176 (708)
+.+++++..+.+|...|.+++|+|++++|++|+.|+.|++||+.++... ..+.+|...|.++.|+|++++|++++.|
T Consensus 179 ~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~--~~~~~h~~~v~~~~~~~~g~~l~s~s~D~ 256 (410)
T 1vyh_C 179 FQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCV--KTFTGHREWVRMVRPNQDGTLIASCSNDQ 256 (410)
T ss_dssp TTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEE--EEEECCSSCEEEEEECTTSSEEEEEETTS
T ss_pred CCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEE--EEEeCCCccEEEEEECCCCCEEEEEcCCC
Confidence 9999999999999999999999999999999999999999999999887 7788999999999999999999999999
Q ss_pred eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccC--------------------C-EEEEEcCCCcEEEEeCCCCe
Q psy12614 177 AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCAD--------------------F-TIITGDSGGFVRFWDGKTGV 235 (708)
Q Consensus 177 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--------------------~-~l~~~~~dg~i~~wd~~~~~ 235 (708)
.|++||+.+++....+. .|...|.+++|+|+ + .+++|+.|+.|++||+.+++
T Consensus 257 ~v~vwd~~~~~~~~~~~-------~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~ 329 (410)
T 1vyh_C 257 TVRVWVVATKECKAELR-------EHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGM 329 (410)
T ss_dssp CEEEEETTTCCEEEEEC-------CCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTE
T ss_pred eEEEEECCCCceeeEec-------CCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCc
Confidence 99999999999888775 33888999999996 4 48999999999999999999
Q ss_pred eEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CC
Q psy12614 236 QWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GN 313 (708)
Q Consensus 236 ~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~ 313 (708)
++..+.+|...|.+++|+|++++|++++.||.|++||+.+ ++ ....+.+|...|.+++|+ +.
T Consensus 330 ~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~--------~~--------~~~~~~~h~~~v~~l~~~~~~~ 393 (410)
T 1vyh_C 330 CLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKN--------KR--------CMKTLNAHEHFVTSLDFHKTAP 393 (410)
T ss_dssp EEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTT--------SC--------CCEEEECCSSCEEEEEECSSSS
T ss_pred eEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC--------Cc--------eEEEEcCCCCcEEEEEEcCCCC
Confidence 9999999999999999999999999999999999999988 65 567788999999999999 78
Q ss_pred EEEEEcCCCeEEEEeC
Q psy12614 314 RLYSGGLDSYLSLSYY 329 (708)
Q Consensus 314 ~l~s~~~d~~i~iw~~ 329 (708)
+|++|+.|+.|++|++
T Consensus 394 ~l~sgs~D~~i~vW~~ 409 (410)
T 1vyh_C 394 YVVTGSVDQTVKVWEC 409 (410)
T ss_dssp CEEEEETTSEEEEEC-
T ss_pred EEEEEeCCCcEEEEeC
Confidence 9999999999999986
|
| >3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-43 Score=349.79 Aligned_cols=285 Identities=18% Similarity=0.303 Sum_probs=261.1
Q ss_pred eeeccCCCCcEEEEEEcCC----CCEEEEEeCCCcEEEEeCCCCCe-EEEEEecCCCCCcEEEEEEe--CCEEEEEcCCC
Q psy12614 19 IKFYAPEPKVINCIACEPK----SSRLAVSRADQSIEIWDISETPH-VDRVFIGDPLSNSIECLTWF--NDRLFSGGLQG 91 (708)
Q Consensus 19 ~~~~~~h~~~v~~~~~s~~----~~~la~~~~dg~v~iwd~~~~~~-~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~ 91 (708)
.+.+.+|.+.|.+++|+|+ +++||+|+.|++|+|||+.++.. ....+.+|. ..|.+++|+ +..+++++.|+
T Consensus 25 ~~~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~--~~v~~~~~~~~~~~l~s~s~D~ 102 (321)
T 3ow8_A 25 FKQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQ--LGVVSVDISHTLPIAASSSLDA 102 (321)
T ss_dssp EEETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCS--SCEEEEEECSSSSEEEEEETTS
T ss_pred eeecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCC--CCEEEEEECCCCCEEEEEeCCC
Confidence 3557899999999999985 67999999999999999987654 234789999 999999999 88999999999
Q ss_pred cEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEE
Q psy12614 92 FVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLV 171 (708)
Q Consensus 92 ~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~ 171 (708)
+|++||+.+++++..+..|...+.+++|+|++++|++++.|+.|++||+.+++.. ..+..|...|.+++|+|++++|+
T Consensus 103 ~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~--~~~~~~~~~v~~~~~spdg~~la 180 (321)
T 3ow8_A 103 HIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKE--YSLDTRGKFILSIAYSPDGKYLA 180 (321)
T ss_dssp EEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEE--EEEECSSSCEEEEEECTTSSEEE
T ss_pred cEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCcee--EEecCCCceEEEEEECCCCCEEE
Confidence 9999999999999999999999999999999999999999999999999999887 56778888999999999999999
Q ss_pred EecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCeeEEEeeccccCeEE
Q psy12614 172 TGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDVKTHKKDILA 249 (708)
Q Consensus 172 ~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~ 249 (708)
+++.| .|++||+.+++.+..+. .+...|.+++|+|+++ +++++.||.|++||+++++....+.+|...|.+
T Consensus 181 sg~~dg~i~iwd~~~~~~~~~~~-------~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~ 253 (321)
T 3ow8_A 181 SGAIDGIINIFDIATGKLLHTLE-------GHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLN 253 (321)
T ss_dssp EEETTSCEEEEETTTTEEEEEEC-------CCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEE
T ss_pred EEcCCCeEEEEECCCCcEEEEEc-------ccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEE
Confidence 99999 99999999999888775 3378899999999996 899999999999999999999999999999999
Q ss_pred EEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEEEcCCCeEEEE
Q psy12614 250 LTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSGGLDSYLSLS 327 (708)
Q Consensus 250 ~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~~~d~~i~iw 327 (708)
++|+|++++|++++.|+.|++||+.+ ++ ....+.+|...|.+++|+ +..|++++.|+.|++|
T Consensus 254 ~~~sp~~~~l~s~s~D~~v~iwd~~~--------~~--------~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vw 317 (321)
T 3ow8_A 254 VAFCPDDTHFVSSSSDKSVKVWDVGT--------RT--------CVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIY 317 (321)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETTT--------TE--------EEEEECCCSSCEEEEEECTTSSEEEEEETTCCEEEE
T ss_pred EEECCCCCEEEEEeCCCcEEEEeCCC--------CE--------EEEEEcCCCCcEEEEEECCCCCEEEEEeCCCeEEEE
Confidence 99999999999999999999999998 65 677888999999999999 7899999999999999
Q ss_pred eCC
Q psy12614 328 YYP 330 (708)
Q Consensus 328 ~~~ 330 (708)
|..
T Consensus 318 d~p 320 (321)
T 3ow8_A 318 DCP 320 (321)
T ss_dssp ECC
T ss_pred eCC
Confidence 973
|
| >2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-43 Score=345.05 Aligned_cols=290 Identities=12% Similarity=0.206 Sum_probs=258.2
Q ss_pred eeeeeeeccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCc
Q psy12614 15 GVHNIKFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGF 92 (708)
Q Consensus 15 ~~~~~~~~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~ 92 (708)
+++..+.+.+|.+.|++++|+|++++||+|+.||.|+|||+.++..+. .+.+|. .+|.+++|+ +++|++++.|++
T Consensus 2 ~l~~~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~-~~~~~~--~~v~~~~~~~~~~~l~s~s~d~~ 78 (304)
T 2ynn_A 2 KLDIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVR-SIQVTE--TPVRAGKFIARKNWIIVGSDDFR 78 (304)
T ss_dssp CCCCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEE-EEECCS--SCEEEEEEEGGGTEEEEEETTSE
T ss_pred cceeEEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeE-EeeccC--CcEEEEEEeCCCCEEEEECCCCE
Confidence 345566789999999999999999999999999999999999988776 889999 999999999 999999999999
Q ss_pred EEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECC-CCCEEE
Q psy12614 93 VNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHS-SGDYLV 171 (708)
Q Consensus 93 i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~-d~~~l~ 171 (708)
|++||+.+++++..+.+|.+.|.+++|+|++++|++|+.|++|++||++++.... ..+.+|...|.+++|+| ++.+|+
T Consensus 79 i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~-~~~~~h~~~v~~v~~~p~~~~~l~ 157 (304)
T 2ynn_A 79 IRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALE-QTFEGHEHFVMCVAFNPKDPSTFA 157 (304)
T ss_dssp EEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEE-EEECCCCSCEEEEEECTTCTTEEE
T ss_pred EEEEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchh-hhhcccCCcEEEEEECCCCCCEEE
Confidence 9999999999999999999999999999999999999999999999999875432 67889999999999999 678999
Q ss_pred EecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEcc--CC-EEEEEcCCCcEEEEeCCCCeeEEEeeccccCe
Q psy12614 172 TGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCA--DF-TIITGDSGGFVRFWDGKTGVQWSDVKTHKKDI 247 (708)
Q Consensus 172 ~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~-~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i 247 (708)
+++.| .|++||+.++.....+... +...+..+.|.| ++ .+++++.|+.|++||+++++++..+.+|...|
T Consensus 158 sgs~D~~v~iwd~~~~~~~~~~~~~------~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v 231 (304)
T 2ynn_A 158 SGCLDRTVKVWSLGQSTPNFTLTTG------QERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNV 231 (304)
T ss_dssp EEETTSEEEEEETTCSSCSEEEECC------CTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCE
T ss_pred EEeCCCeEEEEECCCCCccceeccC------CcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCE
Confidence 99999 9999999888877666543 267788999987 55 49999999999999999999999999999999
Q ss_pred EEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CC--EEEEEcCCCe
Q psy12614 248 LALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GN--RLYSGGLDSY 323 (708)
Q Consensus 248 ~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~--~l~s~~~d~~ 323 (708)
.+++|+|++++|++++.||.|++||..+ ++ ....+..|...+.+++++ +. ++++|+.| .
T Consensus 232 ~~~~~~p~~~~l~s~s~Dg~i~iWd~~~--------~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~asg~~~-g 294 (304)
T 2ynn_A 232 SFAVFHPTLPIIISGSEDGTLKIWNSST--------YK--------VEKTLNVGLERSWCIATHPTGRKNYIASGFDN-G 294 (304)
T ss_dssp EEEEECSSSSEEEEEETTSCEEEEETTT--------CC--------EEEEECCSSSSEEEEEECTTCGGGCEEEEETT-E
T ss_pred EEEEECCCCCEEEEEcCCCeEEEEECCC--------Cc--------eeeeccCCCccEEEEEECCCCCceEEEEecCC-c
Confidence 9999999999999999999999999998 76 677888899999999987 32 46666655 4
Q ss_pred EEEEeCCC
Q psy12614 324 LSLSYYPP 331 (708)
Q Consensus 324 i~iw~~~~ 331 (708)
+.+|++.+
T Consensus 295 ~~~~~~~~ 302 (304)
T 2ynn_A 295 FTVLSLGN 302 (304)
T ss_dssp EEEEECC-
T ss_pred eEEEEecc
Confidence 66776643
|
| >1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-42 Score=344.52 Aligned_cols=287 Identities=15% Similarity=0.249 Sum_probs=261.0
Q ss_pred ceeeeeeeeccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCC
Q psy12614 13 TYGVHNIKFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQ 90 (708)
Q Consensus 13 ~~~~~~~~~~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d 90 (708)
....+..+.+.+|.+.|++++|+|++++||+|+.||.|+|||+.++..+. .+..|. ..|.+++|+ +++|++++.|
T Consensus 42 ~~~~~~~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~-~~~~~~--~~v~~~~~s~~~~~l~s~~~d 118 (340)
T 1got_B 42 RIQMRTRRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVH-AIPLRS--SWVMTCAYAPSGNYVACGGLD 118 (340)
T ss_dssp CCCCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEE-EEECSS--SCEEEEEECTTSSEEEEEETT
T ss_pred cccchhheeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcce-EeecCC--ccEEEEEECCCCCEEEEEeCC
Confidence 34456677899999999999999999999999999999999999988876 889998 999999999 9999999999
Q ss_pred CcEEEEECCCC----eEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCC
Q psy12614 91 GFVNEYDMRRL----NIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSS 166 (708)
Q Consensus 91 ~~i~vwd~~~~----~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d 166 (708)
+.|++||+.++ +....+.+|.+.|.+++|++++. +++++.|+.|++||+.+++.. ..+.+|.+.|.+++|+|+
T Consensus 119 ~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~~~~--~~~~~h~~~v~~~~~~~~ 195 (340)
T 1got_B 119 NICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQT--TTFTGHTGDVMSLSLAPD 195 (340)
T ss_dssp CEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETTE-EEEEETTSCEEEEETTTTEEE--EEECCCSSCEEEEEECTT
T ss_pred CeEEEEECccCCCcceeEEEecCCCccEEEEEECCCCc-EEEEECCCcEEEEECCCCcEE--EEEcCCCCceEEEEECCC
Confidence 99999999875 45677889999999999999875 889999999999999999887 778899999999999999
Q ss_pred CCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCeeEEEeec--
Q psy12614 167 GDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDVKT-- 242 (708)
Q Consensus 167 ~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~~~-- 242 (708)
+++|++++.| .|++||+.++..+..+. .|...|.+++|+|++. +++++.||.|++||+++++.+..+..
T Consensus 196 ~~~l~sg~~d~~v~~wd~~~~~~~~~~~-------~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~ 268 (340)
T 1got_B 196 TRLFVSGACDASAKLWDVREGMCRQTFT-------GHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDN 268 (340)
T ss_dssp SSEEEEEETTSCEEEEETTTCSEEEEEC-------CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTT
T ss_pred CCEEEEEeCCCcEEEEECCCCeeEEEEc-------CCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCC
Confidence 9999999999 99999999999888775 3488899999999995 99999999999999999988777653
Q ss_pred cccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEEEcC
Q psy12614 243 HKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSGGL 320 (708)
Q Consensus 243 ~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~~~ 320 (708)
+...|.+++|+|++++|++|+.|+.|++||..+ ++ ....+.+|...|.+++|+ +.+|++++.
T Consensus 269 ~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~--------~~--------~~~~~~~h~~~v~~~~~s~dg~~l~s~s~ 332 (340)
T 1got_B 269 IICGITSVSFSKSGRLLLAGYDDFNCNVWDALK--------AD--------RAGVLAGHDNRVSCLGVTDDGMAVATGSW 332 (340)
T ss_dssp CCSCEEEEEECTTSSEEEEEETTSEEEEEETTT--------CC--------EEEEEECCSSCEEEEEECTTSSCEEEEET
T ss_pred cccceEEEEECCCCCEEEEECCCCeEEEEEccc--------Cc--------EeeEeecCCCcEEEEEEcCCCCEEEEEcC
Confidence 335799999999999999999999999999988 65 677889999999999999 789999999
Q ss_pred CCeEEEEe
Q psy12614 321 DSYLSLSY 328 (708)
Q Consensus 321 d~~i~iw~ 328 (708)
|+.|++||
T Consensus 333 D~~i~iWd 340 (340)
T 1got_B 333 DSFLKIWN 340 (340)
T ss_dssp TSCEEEEC
T ss_pred CccEEecC
Confidence 99999996
|
| >4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-42 Score=342.74 Aligned_cols=283 Identities=13% Similarity=0.171 Sum_probs=239.5
Q ss_pred cCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCC-----------CCeEEEEEecCCCCCcEEEEEEe-CCEEEEEcCC
Q psy12614 23 APEPKVINCIACEPKSSRLAVSRADQSIEIWDISE-----------TPHVDRVFIGDPLSNSIECLTWF-NDRLFSGGLQ 90 (708)
Q Consensus 23 ~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~-----------~~~~~~~~~~h~~~~~v~~l~~~-~~~l~s~~~d 90 (708)
..|+..|.+++|+|||++|++++ |+++++||... ..... ....+. ..|.+++|+ .+.|++++.|
T Consensus 27 ~~~~~~v~~~~fs~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~-~~~~~~--~~v~~~~~s~d~~l~~~s~d 102 (344)
T 4gqb_B 27 ACMERQLEAARYRSDGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCS-AGVQTE--AGVADLTWVGERGILVASDS 102 (344)
T ss_dssp SSCCSEEEEEEECTTSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCS-EEEEES--SCEEEEEEETTTEEEEEETT
T ss_pred ccccCCEEEEEECCCCCEEEEEe-CCceEEeeceeeeeccccccCCcceee-eeeccC--CCEEEEEEeCCCeEEEEECC
Confidence 45778899999999999999887 66888887321 11111 233345 789999999 8899999999
Q ss_pred CcEEEEECCCCeEeEE----EeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCC
Q psy12614 91 GFVNEYDMRRLNIKSS----TAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSS 166 (708)
Q Consensus 91 ~~i~vwd~~~~~~~~~----~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d 166 (708)
|+|++||+.+++.+.. +.+|.+.|++++|+|+|++|++|+.|+.|++||+.+++.+ ..+.+|.+.|.+++|+|+
T Consensus 103 g~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~--~~~~~h~~~V~~~~~~~~ 180 (344)
T 4gqb_B 103 GAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVL--SSYRAHAAQVTCVAASPH 180 (344)
T ss_dssp SEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEE--EEECCCSSCEEEEEECSS
T ss_pred CEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEE--EEEcCcCCceEEEEecCC
Confidence 9999999999875543 4489999999999999999999999999999999999887 789999999999999999
Q ss_pred CC-EEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCC-E-EEEEcCCCcEEEEeCCCCeeEEEeec
Q psy12614 167 GD-YLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADF-T-IITGDSGGFVRFWDGKTGVQWSDVKT 242 (708)
Q Consensus 167 ~~-~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~-l~~~~~dg~i~~wd~~~~~~~~~~~~ 242 (708)
+. +|++++.| .|++||+++++....+... .+...+.+++|+|++ + +++|+.||.|++||+++++++..+.+
T Consensus 181 ~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~-----~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~ 255 (344)
T 4gqb_B 181 KDSVFLSCSEDNRILLWDTRCPKPASQIGCS-----APGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAV 255 (344)
T ss_dssp CTTEEEEEETTSCEEEEETTSSSCEEECC---------CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEEC
T ss_pred CCCceeeeccccccccccccccceeeeeecc-----eeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcC
Confidence 84 78999999 9999999999988877544 335678999999965 4 78899999999999999999999999
Q ss_pred cccCeEEEEEeCCC-CEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--C-CEEEEE
Q psy12614 243 HKKDILALTVSEDE-NYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--G-NRLYSG 318 (708)
Q Consensus 243 ~~~~i~~~~~s~~~-~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~-~~l~s~ 318 (708)
|...|.+++|+|++ ++|++++.|+.|++||+.+ ++ ...+.+|.+.|.+++|+ + .+|+++
T Consensus 256 h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~--------~~---------~~~~~~H~~~V~~v~~sp~~~~llas~ 318 (344)
T 4gqb_B 256 HSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSL--------SE---------LFRSQAHRDFVRDATWSPLNHSLLTTV 318 (344)
T ss_dssp CSSCEEEEEECSSSSCCEEEEETTSCEEEECTTC--------CE---------EEEECCCSSCEEEEEECSSSTTEEEEE
T ss_pred CCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCC--------Cc---------EEEEcCCCCCEEEEEEeCCCCeEEEEE
Confidence 99999999999998 5799999999999999988 63 45678999999999998 4 467899
Q ss_pred cCCCeEEEEeCCCCc
Q psy12614 319 GLDSYLSLSYYPPKT 333 (708)
Q Consensus 319 ~~d~~i~iw~~~~~~ 333 (708)
+.|++|++|++.+..
T Consensus 319 s~D~~v~~w~v~~~~ 333 (344)
T 4gqb_B 319 GWDHQVVHHVVPTEP 333 (344)
T ss_dssp ETTSCEEEEECCC--
T ss_pred cCCCeEEEEECCCCC
Confidence 999999999997654
|
| >2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-41 Score=339.01 Aligned_cols=291 Identities=17% Similarity=0.262 Sum_probs=262.4
Q ss_pred CccceeeeeeeeccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEE
Q psy12614 10 TMGTYGVHNIKFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSG 87 (708)
Q Consensus 10 ~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~ 87 (708)
.+..+.++..+.+.+|.+.|++++|+|++++||+|+.||+|+|||..+++... .+..|. ..|.+++|+ +..|+++
T Consensus 48 ~~~~~~~~~~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~-~~~~~~--~~v~~~~~sp~g~~lasg 124 (354)
T 2pbi_B 48 ALGQFVMKTRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEH-AVTMPC--TWVMACAYAPSGCAIACG 124 (354)
T ss_dssp CCCCCCCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEE-EEECSS--SCCCEEEECTTSSEEEEE
T ss_pred cccccccEEEEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcce-EEecCC--CCEEEEEECCCCCEEEEe
Confidence 34555567778899999999999999999999999999999999999988776 788888 899999999 9999999
Q ss_pred cCCCcEEEEECCCC------eEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEE
Q psy12614 88 GLQGFVNEYDMRRL------NIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCT 161 (708)
Q Consensus 88 ~~d~~i~vwd~~~~------~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~ 161 (708)
+.|+.+++|++... .....+.+|.+.|.+++|+|++..|++++.|++|++||+++++.. ..+.+|...|.++
T Consensus 125 ~~d~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~--~~~~~h~~~v~~~ 202 (354)
T 2pbi_B 125 GLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLL--QSFHGHGADVLCL 202 (354)
T ss_dssp STTSEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEE--EEEECCSSCEEEE
T ss_pred eCCCCEEEEEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEE--EEEcCCCCCeEEE
Confidence 99999999998653 345677899999999999999999999999999999999999887 7888999999999
Q ss_pred EECC--CCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCeeE
Q psy12614 162 AWHS--SGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQW 237 (708)
Q Consensus 162 ~~s~--d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~ 237 (708)
+|+| ++++|++++.| .|++||+++++.+..+. .|...|.+++|+|++. +++++.|+.|++||+++++.+
T Consensus 203 ~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~-------~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~ 275 (354)
T 2pbi_B 203 DLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFE-------THESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREV 275 (354)
T ss_dssp EECCCSSCCEEEEEETTSCEEEEETTTCCEEEEEC-------CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEE
T ss_pred EEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEec-------CCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEE
Confidence 9987 57899999999 99999999999888775 3488999999999995 999999999999999998877
Q ss_pred EEeecc--ccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CC
Q psy12614 238 SDVKTH--KKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GN 313 (708)
Q Consensus 238 ~~~~~~--~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~ 313 (708)
..+..+ ...+.+++|+|++++|++++.|+.|++||+.+ ++ ....+.+|...|.+++|+ +.
T Consensus 276 ~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~--------~~--------~~~~l~~h~~~v~~l~~spdg~ 339 (354)
T 2pbi_B 276 AIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLK--------GS--------RVSILFGHENRVSTLRVSPDGT 339 (354)
T ss_dssp EEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTT--------CS--------EEEEECCCSSCEEEEEECTTSS
T ss_pred EEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCC--------Cc--------eEEEEECCCCcEEEEEECCCCC
Confidence 766533 35789999999999999999999999999988 65 667788999999999999 88
Q ss_pred EEEEEcCCCeEEEEe
Q psy12614 314 RLYSGGLDSYLSLSY 328 (708)
Q Consensus 314 ~l~s~~~d~~i~iw~ 328 (708)
+|++++.|+.|++|+
T Consensus 340 ~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 340 AFCSGSWDHTLRVWA 354 (354)
T ss_dssp CEEEEETTSEEEEEC
T ss_pred EEEEEcCCCCEEecC
Confidence 999999999999996
|
| >3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-41 Score=335.30 Aligned_cols=303 Identities=15% Similarity=0.225 Sum_probs=251.8
Q ss_pred eeeeeeccCCCC-cEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEE--EEEecCCCCCcEEEEEEe--CCEEEEEcCC
Q psy12614 16 VHNIKFYAPEPK-VINCIACEPKSSRLAVSRADQSIEIWDISETPHVD--RVFIGDPLSNSIECLTWF--NDRLFSGGLQ 90 (708)
Q Consensus 16 ~~~~~~~~~h~~-~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~--~~~~~h~~~~~v~~l~~~--~~~l~s~~~d 90 (708)
+..+..+.+|++ .|.+++|+|+|++||+|+.||.|+|||+.++.... ....+|. ..|.+++|+ +++|++++.|
T Consensus 5 ~~~~~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~--~~v~~~~~sp~g~~l~s~s~D 82 (345)
T 3fm0_A 5 LVLLGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQ--RTVRKVAWSPCGNYLASASFD 82 (345)
T ss_dssp EEEEEEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCS--SCEEEEEECTTSSEEEEEETT
T ss_pred EEEeeeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccC--CcEEEEEECCCCCEEEEEECC
Confidence 345667889988 99999999999999999999999999999876432 2346898 999999999 8999999999
Q ss_pred CcEEEEECCCC--eEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcE-EEEEecccccccEEEEEECCCC
Q psy12614 91 GFVNEYDMRRL--NIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGL-LYEKLLDRQQGRILCTAWHSSG 167 (708)
Q Consensus 91 ~~i~vwd~~~~--~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~-~~~~~~~~~~~~v~~~~~s~d~ 167 (708)
++|++||+.++ +++..+.+|...|.+++|+|++++|++++.|+.|++||+.++.. .....+.+|...|.+++|+|++
T Consensus 83 ~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~ 162 (345)
T 3fm0_A 83 ATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQ 162 (345)
T ss_dssp SCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSS
T ss_pred CcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCC
Confidence 99999998876 46788899999999999999999999999999999999987642 2236788899999999999999
Q ss_pred CEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCC-----------
Q psy12614 168 DYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTG----------- 234 (708)
Q Consensus 168 ~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~----------- 234 (708)
++|++++.| .|++||..+++........ +|...|++++|+|+|+ |++++.|+.|++||....
T Consensus 163 ~~l~s~s~d~~i~~w~~~~~~~~~~~~~~-----~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~ 237 (345)
T 3fm0_A 163 ELLASASYDDTVKLYREEEDDWVCCATLE-----GHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGS 237 (345)
T ss_dssp SCEEEEETTSCEEEEEEETTEEEEEEEEC-----CCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC--
T ss_pred CEEEEEeCCCcEEEEEecCCCEEEEEEec-----CCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeecc
Confidence 999999999 9999999887654333332 4588999999999995 999999999999996321
Q ss_pred ----eeEEEeec-cccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceE-EeEEEeccccceEEE
Q psy12614 235 ----VQWSDVKT-HKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWV-RSVNRVIHEGDVKSL 308 (708)
Q Consensus 235 ----~~~~~~~~-~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~v~~l 308 (708)
+++..+.+ |...|.+++|+|++..|++++.|+.|++|+... +.....+... ......+|...|.++
T Consensus 238 ~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~--------~~~~~~~~~~~~~~~~~~h~~~V~~v 309 (345)
T 3fm0_A 238 DPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDP--------NSDPQQPTFSLTAHLHQAHSQDVNCV 309 (345)
T ss_dssp -CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECT--------TSCTTSCCEEEEEEETTSSSSCEEEE
T ss_pred CCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCC--------CCCcceeeEEEEeeecccccCcEeEe
Confidence 23444444 888999999999999999999999999999876 3211112221 223345899999999
Q ss_pred EEe--C-CEEEEEcCCCeEEEEeCCCCc
Q psy12614 309 ALH--G-NRLYSGGLDSYLSLSYYPPKT 333 (708)
Q Consensus 309 ~~~--~-~~l~s~~~d~~i~iw~~~~~~ 333 (708)
+|+ + .+|++++.||.|++|++.+..
T Consensus 310 ~~~p~~~~~laS~s~Dg~v~~W~~~~~~ 337 (345)
T 3fm0_A 310 AWNPKEPGLLASCSDDGEVAFWKYQRPE 337 (345)
T ss_dssp EECSSSTTEEEEEETTSCEEEEEECC--
T ss_pred EEeCCCceEEEEcCCCCcEEEEEecCCC
Confidence 999 3 599999999999999998765
|
| >1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-41 Score=344.03 Aligned_cols=280 Identities=15% Similarity=0.236 Sum_probs=255.6
Q ss_pred EEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEcc
Q psy12614 64 VFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQIS 141 (708)
Q Consensus 64 ~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~ 141 (708)
.+.+|. .+|++++|+ +.+|++|+.||+|++||+.+++....+.+|.+.|.+++|+|++++|++|+.|++|++||+.
T Consensus 103 ~l~gh~--~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~ 180 (410)
T 1vyh_C 103 ALSGHR--SPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ 180 (410)
T ss_dssp EEECCS--SCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETT
T ss_pred eecccC--CcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCC
Confidence 788999 999999999 8999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEE
Q psy12614 142 DEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IIT 219 (708)
Q Consensus 142 ~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~ 219 (708)
+++.. ..+.+|...|.+++|+|++++|++++.| .|++||+.++..+..+.. |...|.+++|+|++. +++
T Consensus 181 ~~~~~--~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~-------h~~~v~~~~~~~~g~~l~s 251 (410)
T 1vyh_C 181 GFECI--RTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTG-------HREWVRMVRPNQDGTLIAS 251 (410)
T ss_dssp SSCEE--ECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEEC-------CSSCEEEEEECTTSSEEEE
T ss_pred CCcee--EEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeC-------CCccEEEEEECCCCCEEEE
Confidence 98887 7889999999999999999999999999 999999999999888763 388899999999996 889
Q ss_pred EcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCC--------------------CCEEEEEecCCeEEEEEccCCccc
Q psy12614 220 GDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSED--------------------ENYLYCAGVDPTVVCFQRTRKPQV 279 (708)
Q Consensus 220 ~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~--------------------~~~l~~~~~dg~i~iw~~~~~~~~ 279 (708)
++.||.|++||+.+++....+.+|...|.+++|+|+ +.+|++|+.|+.|++||+.+
T Consensus 252 ~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~---- 327 (410)
T 1vyh_C 252 CSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVST---- 327 (410)
T ss_dssp EETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTT----
T ss_pred EcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCC----
Confidence 999999999999999999999999999999999996 67899999999999999998
Q ss_pred ccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEEEcCCCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEE
Q psy12614 280 CSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVL 357 (708)
Q Consensus 280 ~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~ 357 (708)
+. ....+.+|...|.+++|+ +.+|++++.|+.|++||+.+..
T Consensus 328 ----~~--------~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~------------------------ 371 (410)
T 1vyh_C 328 ----GM--------CLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKR------------------------ 371 (410)
T ss_dssp ----TE--------EEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSC------------------------
T ss_pred ----Cc--------eEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc------------------------
Confidence 65 677888999999999999 8899999999999999885432
Q ss_pred EEcCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEEEc-CCceEEEEE
Q psy12614 358 LQYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYST-ESCVRLHSL 431 (708)
Q Consensus 358 ~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~-d~~i~i~~~ 431 (708)
.......|...|++++|+|++.+|+++. |++|++|++
T Consensus 372 -------------------------------------~~~~~~~h~~~v~~l~~~~~~~~l~sgs~D~~i~vW~~ 409 (410)
T 1vyh_C 372 -------------------------------------CMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWEC 409 (410)
T ss_dssp -------------------------------------CCEEEECCSSCEEEEEECSSSSCEEEEETTSEEEEEC-
T ss_pred -------------------------------------eEEEEcCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeC
Confidence 1122246788899999999999999855 999999986
|
| >4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-40 Score=327.05 Aligned_cols=285 Identities=18% Similarity=0.268 Sum_probs=258.7
Q ss_pred eeeccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEE
Q psy12614 19 IKFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEY 96 (708)
Q Consensus 19 ~~~~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vw 96 (708)
...+.+|.+.|++++|+|++++||+|+.||.|+|||..+++... .+.+|. ..|.+++|+ +++|++++.|+.|++|
T Consensus 16 ~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~-~~~~h~--~~v~~~~~~~~~~~l~s~~~d~~i~vw 92 (312)
T 4ery_A 16 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEK-TISGHK--LGISDVAWSSDSNLLVSASDDKTLKIW 92 (312)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEE-EECCCS--SCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred EEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccch-hhccCC--CceEEEEEcCCCCEEEEECCCCEEEEE
Confidence 44678999999999999999999999999999999999988776 889999 999999999 8999999999999999
Q ss_pred ECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC
Q psy12614 97 DMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA 176 (708)
Q Consensus 97 d~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d 176 (708)
|+.+++++..+.+|...|.+++|+|++++|++++.|+.|++||+.+++.. ..+..|...|.+++|+|++++|++++.|
T Consensus 93 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~~d 170 (312)
T 4ery_A 93 DVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCL--KTLPAHSDPVSAVHFNRDGSLIVSSSYD 170 (312)
T ss_dssp ETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEE--EEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred ECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEE--EEecCCCCcEEEEEEcCCCCEEEEEeCC
Confidence 99999999999999999999999999999999999999999999998876 6788899999999999999999999999
Q ss_pred -eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCeeEEEeeccccCeEE--EEE
Q psy12614 177 -AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDVKTHKKDILA--LTV 252 (708)
Q Consensus 177 -~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~--~~~ 252 (708)
.|++||+.+++.+..+... +...+..++|+|+++ +++++.||.|++||+.+++.+..+.+|...+.+ ..+
T Consensus 171 ~~i~~wd~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 244 (312)
T 4ery_A 171 GLCRIWDTASGQCLKTLIDD------DNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANF 244 (312)
T ss_dssp SCEEEEETTTCCEEEEECCS------SCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEE
T ss_pred CcEEEEECCCCceeeEEecc------CCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEE
Confidence 9999999999888776543 267899999999995 899999999999999999999998888765432 233
Q ss_pred -eCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEEEc--CCCeEEEE
Q psy12614 253 -SEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSGG--LDSYLSLS 327 (708)
Q Consensus 253 -s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~~--~d~~i~iw 327 (708)
.+++++|++++.||.|++||+.+ ++ ....+.+|...|.+++|+ +..+++++ .|+.|++|
T Consensus 245 ~~~~~~~l~sg~~dg~i~vwd~~~--------~~--------~~~~~~~h~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W 308 (312)
T 4ery_A 245 SVTGGKWIVSGSEDNLVYIWNLQT--------KE--------IVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 308 (312)
T ss_dssp ECSSSCEEEECCTTSCEEEEETTT--------CC--------EEEEECCCSSCEEEEEECSSSSEEEEEECTTTCCEEEE
T ss_pred EeCCCcEEEEECCCCEEEEEECCC--------ch--------hhhhhhccCCcEEEEeecCcCCceEEEEccCCccEEEe
Confidence 46789999999999999999998 66 677889999999999999 88899886 69999999
Q ss_pred eCC
Q psy12614 328 YYP 330 (708)
Q Consensus 328 ~~~ 330 (708)
+.+
T Consensus 309 ~~d 311 (312)
T 4ery_A 309 KSD 311 (312)
T ss_dssp ECC
T ss_pred cCC
Confidence 864
|
| >3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-40 Score=328.12 Aligned_cols=282 Identities=16% Similarity=0.218 Sum_probs=252.1
Q ss_pred EEEecCCCCCcEEEEEEe------CCEEEEEcCCCcEEEEECCCCeE--eEEEeecCCceEEEEEecCCCEEEEEeCCCc
Q psy12614 63 RVFIGDPLSNSIECLTWF------NDRLFSGGLQGFVNEYDMRRLNI--KSSTAVTSGTCWCLSVHKKKRLLAAGTEQGH 134 (708)
Q Consensus 63 ~~~~~h~~~~~v~~l~~~------~~~l~s~~~d~~i~vwd~~~~~~--~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~ 134 (708)
+.+.+|. +.|.+++|+ +.+|++|+.|++|++||+.+++. ...+.+|...|.+++|++++.++++++.|+.
T Consensus 26 ~~~~~H~--~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~ 103 (321)
T 3ow8_A 26 KQEQAHD--DAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAH 103 (321)
T ss_dssp EETTSSS--SCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSE
T ss_pred eecccCC--CcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCc
Confidence 3667899 999999997 45899999999999999987764 4568899999999999999999999999999
Q ss_pred EEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEcc
Q psy12614 135 INLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCA 213 (708)
Q Consensus 135 i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 213 (708)
|++||+.+++.. ..+..+...+.+++|+|++++|++++.+ .|++||+++++....+... ...+.+++|+|
T Consensus 104 i~lWd~~~~~~~--~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~-------~~~v~~~~~sp 174 (321)
T 3ow8_A 104 IRLWDLENGKQI--KSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTR-------GKFILSIAYSP 174 (321)
T ss_dssp EEEEETTTTEEE--EEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECS-------SSCEEEEEECT
T ss_pred EEEEECCCCCEE--EEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCC-------CceEEEEEECC
Confidence 999999999887 6777888889999999999999999999 9999999999988877643 77899999999
Q ss_pred CCE-EEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcce
Q psy12614 214 DFT-IITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVW 292 (708)
Q Consensus 214 ~~~-l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~ 292 (708)
+++ +++++.||.|++||+++++.+..+.+|...|.+++|+|++++|++++.|+.|++||+.. ++
T Consensus 175 dg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~--------~~------- 239 (321)
T 3ow8_A 175 DGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQH--------AN------- 239 (321)
T ss_dssp TSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTT--------CC-------
T ss_pred CCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCC--------cc-------
Confidence 996 89999999999999999999999999999999999999999999999999999999988 65
Q ss_pred EEeEEEeccccceEEEEEe--CCEEEEEcCCCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEEEcCCeEEEEEec
Q psy12614 293 VRSVNRVIHEGDVKSLALH--GNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSLG 370 (708)
Q Consensus 293 ~~~~~~~~~~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~ 370 (708)
....+.+|...|.+++|+ +.+|++++.|+.|++||+.+..
T Consensus 240 -~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~------------------------------------- 281 (321)
T 3ow8_A 240 -LAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRT------------------------------------- 281 (321)
T ss_dssp -EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE-------------------------------------
T ss_pred -eeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCE-------------------------------------
Confidence 667888999999999999 8899999999999999986542
Q ss_pred CCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEE-EcCCceEEEEEE
Q psy12614 371 SAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAY-STESCVRLHSLD 432 (708)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~-~~d~~i~i~~~~ 432 (708)
......+|...|.+++|+|+|++|++ +.|+.|++||..
T Consensus 282 ------------------------~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 282 ------------------------CVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp ------------------------EEEEECCCSSCEEEEEECTTSSEEEEEETTCCEEEEECC
T ss_pred ------------------------EEEEEcCCCCcEEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence 23333467888999999999999998 459999999863
|
| >4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-41 Score=340.92 Aligned_cols=285 Identities=15% Similarity=0.189 Sum_probs=239.9
Q ss_pred ccCCCCcEEEEEEcCCCCEEEEEeC------CCcEEEEeCCCCCeE---EEEEecCCCCCcEEEEEEe-CCEEEEEcCCC
Q psy12614 22 YAPEPKVINCIACEPKSSRLAVSRA------DQSIEIWDISETPHV---DRVFIGDPLSNSIECLTWF-NDRLFSGGLQG 91 (708)
Q Consensus 22 ~~~h~~~v~~~~~s~~~~~la~~~~------dg~v~iwd~~~~~~~---~~~~~~h~~~~~v~~l~~~-~~~l~s~~~d~ 91 (708)
...|.+.|++++|||||++||+|+. ||.|++|+..++... .....+|. ..|.+++|+ .+.+++++.||
T Consensus 38 p~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~--~~V~~~~~s~d~~~l~~s~dg 115 (357)
T 4g56_B 38 PACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTE--AGVTDVAWVSEKGILVASDSG 115 (357)
T ss_dssp --CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECS--SCEEEEEEETTTEEEEEETTS
T ss_pred cccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCC--CCEEEEEEcCCCCEEEEECCC
Confidence 4579999999999999999999997 778999998775432 22456788 899999999 77888899999
Q ss_pred cEEEEECCCCeEeE----EEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCC
Q psy12614 92 FVNEYDMRRLNIKS----STAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSG 167 (708)
Q Consensus 92 ~i~vwd~~~~~~~~----~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~ 167 (708)
+|++||+.+++... ...+|.+.|++++|+|++++|++|+.|+.|++||+.+++.. ..+.+|...|.+++|+|++
T Consensus 116 ~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~--~~~~~h~~~v~~v~~s~~~ 193 (357)
T 4g56_B 116 AVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVL--KSYNAHSSEVNCVAACPGK 193 (357)
T ss_dssp CEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEE--EEECCCSSCEEEEEECTTC
T ss_pred EEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEE--EEEcCCCCCEEEEEEccCC
Confidence 99999999887543 34479999999999999999999999999999999999887 7888999999999999998
Q ss_pred C-EEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCC--EEEEEcCCCcEEEEeCCCCeeEEEeecc
Q psy12614 168 D-YLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADF--TIITGDSGGFVRFWDGKTGVQWSDVKTH 243 (708)
Q Consensus 168 ~-~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~l~~~~~dg~i~~wd~~~~~~~~~~~~~ 243 (708)
. ++++++.| .|++||+++++....+... .+...+.+++|+|++ .+++|+.|+.|++||+++++.+..+.+|
T Consensus 194 ~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~-----~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~ 268 (357)
T 4g56_B 194 DTIFLSCGEDGRILLWDTRKPKPATRIDFC-----ASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVH 268 (357)
T ss_dssp SSCEEEEETTSCEEECCTTSSSCBCBCCCT-----TCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCC
T ss_pred CceeeeeccCCceEEEECCCCceeeeeeec-----cccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEecc
Confidence 5 78899999 9999999998877665543 347789999999986 3788999999999999999999999999
Q ss_pred ccCeEEEEEeCCC-CEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe---CCEEEEEc
Q psy12614 244 KKDILALTVSEDE-NYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH---GNRLYSGG 319 (708)
Q Consensus 244 ~~~i~~~~~s~~~-~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~---~~~l~s~~ 319 (708)
...|.+++|+|++ ++|++++.|+.|++||+.+ ++ .....+|.+.|++++|+ +.+|++++
T Consensus 269 ~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~--------~~---------~~~~~~H~~~V~~vafsP~d~~~l~s~s 331 (357)
T 4g56_B 269 SQNITGLAYSYHSSPFLASISEDCTVAVLDADF--------SE---------VFRDLSHRDFVTGVAWSPLDHSKFTTVG 331 (357)
T ss_dssp SSCEEEEEECSSSSCCEEEEETTSCEEEECTTS--------CE---------EEEECCCSSCEEEEEECSSSTTEEEEEE
T ss_pred ceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCC--------Cc---------EeEECCCCCCEEEEEEeCCCCCEEEEEc
Confidence 9999999999987 5789999999999999988 63 34456899999999997 67999999
Q ss_pred CCCeEEEEeCCCC
Q psy12614 320 LDSYLSLSYYPPK 332 (708)
Q Consensus 320 ~d~~i~iw~~~~~ 332 (708)
.|+.|++|++...
T Consensus 332 ~Dg~v~iW~~~~~ 344 (357)
T 4g56_B 332 WDHKVLHHHLPSE 344 (357)
T ss_dssp TTSCEEEEECC--
T ss_pred CCCeEEEEECCCC
Confidence 9999999999653
|
| >3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-40 Score=323.42 Aligned_cols=286 Identities=13% Similarity=0.178 Sum_probs=248.4
Q ss_pred eeeeeeccCCCCcEEEEEEcCCC-CEEEEEeCCCcEEEEeCCCCC----eEEEEEecCCCCCcEEEEEEe--CCEEEEEc
Q psy12614 16 VHNIKFYAPEPKVINCIACEPKS-SRLAVSRADQSIEIWDISETP----HVDRVFIGDPLSNSIECLTWF--NDRLFSGG 88 (708)
Q Consensus 16 ~~~~~~~~~h~~~v~~~~~s~~~-~~la~~~~dg~v~iwd~~~~~----~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~ 88 (708)
+.....+.+|.+.|++++|+|++ ++|++|+.|++|++||+.... .....+.+|. ..|.+++|+ +++|++++
T Consensus 7 ~~l~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~--~~v~~~~~s~dg~~l~s~s 84 (319)
T 3frx_A 7 LVLRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHS--HIVQDCTLTADGAYALSAS 84 (319)
T ss_dssp EEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCS--SCEEEEEECTTSSEEEEEE
T ss_pred EEEEEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCc--ccEEEEEECCCCCEEEEEe
Confidence 33445789999999999999965 899999999999999987532 1224789999 999999999 89999999
Q ss_pred CCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCC--
Q psy12614 89 LQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSS-- 166 (708)
Q Consensus 89 ~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d-- 166 (708)
.|++|++||+.+++++..+.+|...|.+++|+|++.+|++|+.|+.|++||+..... ..+.+|...|.++.|+|.
T Consensus 85 ~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~~~---~~~~~h~~~v~~~~~~~~~~ 161 (319)
T 3frx_A 85 WDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQCL---ATLLGHNDWVSQVRVVPNEK 161 (319)
T ss_dssp TTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTSCEE---EEECCCSSCEEEEEECCC--
T ss_pred CCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeE---EEEeccCCcEEEEEEccCCC
Confidence 999999999999999999999999999999999999999999999999999976543 678899999999999985
Q ss_pred ----CCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCeeEEEe
Q psy12614 167 ----GDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDV 240 (708)
Q Consensus 167 ----~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~ 240 (708)
+..|++++.| .|++||+.+++....+. +|...|.+++|+|+++ +++++.||.|++||+.+++.+..+
T Consensus 162 ~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~-------~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~ 234 (319)
T 3frx_A 162 ADDDSVTIISAGNDKMVKAWNLNQFQIEADFI-------GHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTL 234 (319)
T ss_dssp ----CCEEEEEETTSCEEEEETTTTEEEEEEC-------CCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred CCCCccEEEEEeCCCEEEEEECCcchhheeec-------CCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEe
Confidence 4589999999 99999999988777665 3488999999999995 899999999999999999999888
Q ss_pred eccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEE--------eccccceEEEEEe-
Q psy12614 241 KTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNR--------VIHEGDVKSLALH- 311 (708)
Q Consensus 241 ~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~--------~~~~~~v~~l~~~- 311 (708)
.. ...|.+++|+|++.+|++++. +.+++|++.. +. ....+ ..|...+.+++|+
T Consensus 235 ~~-~~~v~~~~~sp~~~~la~~~~-~~i~v~~~~~--------~~--------~~~~~~~~~~~~~~~~~~~v~~~~~sp 296 (319)
T 3frx_A 235 SA-QDEVFSLAFSPNRYWLAAATA-TGIKVFSLDP--------QY--------LVDDLRPEFAGYSKAAEPHAVSLAWSA 296 (319)
T ss_dssp EC-CSCEEEEEECSSSSEEEEEET-TEEEEEEETT--------EE--------EEEEECCCCTTCCGGGCCCEEEEEECT
T ss_pred cC-CCcEEEEEEcCCCCEEEEEcC-CCcEEEEeCc--------Ce--------eeeccCccccccccCcCcceeEEEECC
Confidence 75 478999999999999988875 5699999987 21 12222 2356678999999
Q ss_pred -CCEEEEEcCCCeEEEEeCCC
Q psy12614 312 -GNRLYSGGLDSYLSLSYYPP 331 (708)
Q Consensus 312 -~~~l~s~~~d~~i~iw~~~~ 331 (708)
+++|++++.|+.|++|++.+
T Consensus 297 dg~~l~sg~~Dg~i~vWd~~t 317 (319)
T 3frx_A 297 DGQTLFAGYTDNVIRVWQVMT 317 (319)
T ss_dssp TSSEEEEEETTSCEEEEEEEE
T ss_pred CCCEEEEeecCceEEEEEEee
Confidence 89999999999999999854
|
| >3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-41 Score=341.22 Aligned_cols=290 Identities=14% Similarity=0.254 Sum_probs=254.0
Q ss_pred eeeeeeeccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCc
Q psy12614 15 GVHNIKFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGF 92 (708)
Q Consensus 15 ~~~~~~~~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~ 92 (708)
....++.+.+|.+.|++++|+|++++||+|+.||+|+|||+.+++... .+.+|. ..|.+++|+ +++|++++.|+.
T Consensus 55 ~~~~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~-~~~~h~--~~v~~~~~s~~g~~las~~~d~~ 131 (380)
T 3iz6_a 55 DLVCCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTH-AIKLHC--PWVMECAFAPNGQSVACGGLDSA 131 (380)
T ss_dssp CCEEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEE-EEECCC--TTCCCCEECTTSSEEEECCSSSC
T ss_pred eeEEeecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccce-EEecCC--CCEEEEEECCCCCEEEEeeCCCc
Confidence 455667899999999999999999999999999999999999988776 899999 999999999 999999999999
Q ss_pred EEEEECCCCe-------EeEEEeecCCceEEEEEecCC-CEEEEEeCCCcEEEEEccCCcEEEEEec-----ccccccEE
Q psy12614 93 VNEYDMRRLN-------IKSSTAVTSGTCWCLSVHKKK-RLLAAGTEQGHINLFQISDEGLLYEKLL-----DRQQGRIL 159 (708)
Q Consensus 93 i~vwd~~~~~-------~~~~~~~~~~~v~~~~~s~~~-~~la~~~~d~~i~iwd~~~~~~~~~~~~-----~~~~~~v~ 159 (708)
|++||+.+.. ....+.+|.+.|.+++|+|++ ..|++|+.|++|++||+.+++.. ..+ .+|...|.
T Consensus 132 v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~--~~~~~~~~~~h~~~v~ 209 (380)
T 3iz6_a 132 CSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRI--SIFGSEFPSGHTADVL 209 (380)
T ss_dssp CEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEE--EEECCCSSSSCCSCEE
T ss_pred EEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEE--EEeecccCCCCccCeE
Confidence 9999987532 345678999999999999974 57999999999999999999876 333 57889999
Q ss_pred EEEECC-CCCEEEEecCC-eEEEEEcCC-CceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCe
Q psy12614 160 CTAWHS-SGDYLVTGCAA-AVRVWDIHK-GHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGV 235 (708)
Q Consensus 160 ~~~~s~-d~~~l~~~~~d-~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~ 235 (708)
+++|++ ++++|++++.| .|++||++. ++.+..+. +|...|.+++|+|++. +++++.||.|++||+++++
T Consensus 210 ~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~-------~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~ 282 (380)
T 3iz6_a 210 SLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYH-------GHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGH 282 (380)
T ss_dssp EEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEEC-------CCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTE
T ss_pred EEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEEC-------CcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCc
Confidence 999977 88999999999 999999974 45555554 4488999999999995 9999999999999999999
Q ss_pred eEEEeeccc-------cCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEE----eccccc
Q psy12614 236 QWSDVKTHK-------KDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNR----VIHEGD 304 (708)
Q Consensus 236 ~~~~~~~~~-------~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~----~~~~~~ 304 (708)
.+..+..+. ..|.+++|+|+|++|++|+.||.|++||... ++ ....+ .+|.+.
T Consensus 283 ~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~--------~~--------~~~~~~~~~~~h~~~ 346 (380)
T 3iz6_a 283 QLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLL--------AE--------MVLNLGTLQNSHEGR 346 (380)
T ss_dssp EEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTT--------CC--------EEEEECCSCSSCCCC
T ss_pred EEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCC--------Cc--------eEEEEecccCCCCCc
Confidence 888776443 2489999999999999999999999999987 54 33333 679999
Q ss_pred eEEEEEe--CCEEEEEcCCCeEEEEeCCCC
Q psy12614 305 VKSLALH--GNRLYSGGLDSYLSLSYYPPK 332 (708)
Q Consensus 305 v~~l~~~--~~~l~s~~~d~~i~iw~~~~~ 332 (708)
|.+++|+ +.+|++|+.|+.|++|++...
T Consensus 347 v~~l~~s~dg~~l~sgs~D~~i~iW~~~~~ 376 (380)
T 3iz6_a 347 ISCLGLSSDGSALCTGSWDKNLKIWAFSGH 376 (380)
T ss_dssp CCEEEECSSSSEEEEECTTSCEEEEECCSS
T ss_pred eEEEEECCCCCEEEEeeCCCCEEEEecCCC
Confidence 9999999 899999999999999998754
|
| >1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-39 Score=331.62 Aligned_cols=287 Identities=17% Similarity=0.302 Sum_probs=246.8
Q ss_pred CCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCC----------------CCcEEEEEEe--CCEEE
Q psy12614 24 PEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPL----------------SNSIECLTWF--NDRLF 85 (708)
Q Consensus 24 ~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~----------------~~~v~~l~~~--~~~l~ 85 (708)
+|.+.|+|++|+|||++||+|+ ++.++||++.+++.+. .+.+|.. ...|.+++|+ +++|+
T Consensus 62 ~h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~ 139 (393)
T 1erj_A 62 DHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVA-RLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLA 139 (393)
T ss_dssp ECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEE-EECC-----------------CCCCBEEEEEECTTSSEEE
T ss_pred CCCCEEEEEEECCCCCEEEEEc-CCcEEEEEecCCCEEE-EecCccccccccccccccccCCCceeEEEEEECCCCCEEE
Confidence 6999999999999999999986 6899999999998776 5655430 1249999999 89999
Q ss_pred EEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECC
Q psy12614 86 SGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHS 165 (708)
Q Consensus 86 s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~ 165 (708)
+++.|++|++||+.+++.+..+.+|...|.+++|+|++++|++++.|+.|++||+.+++.. ..+. +...+.+++|+|
T Consensus 140 s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~--~~~~-~~~~v~~~~~~~ 216 (393)
T 1erj_A 140 TGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCS--LTLS-IEDGVTTVAVSP 216 (393)
T ss_dssp EEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEE--EEEE-CSSCEEEEEECS
T ss_pred EEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeE--EEEE-cCCCcEEEEEEC
Confidence 9999999999999999999999999999999999999999999999999999999999876 3333 567799999999
Q ss_pred -CCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCC--------
Q psy12614 166 -SGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTG-------- 234 (708)
Q Consensus 166 -d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~-------- 234 (708)
++++|++++.| .|++||+.+++.+..+........+|...|.+++|+|+++ +++++.||.|++||+++.
T Consensus 217 ~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~ 296 (393)
T 1erj_A 217 GDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKT 296 (393)
T ss_dssp TTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC-----------
T ss_pred CCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccC
Confidence 89999999999 9999999999888776432110014488999999999995 999999999999998753
Q ss_pred ----eeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEE
Q psy12614 235 ----VQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLAL 310 (708)
Q Consensus 235 ----~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~ 310 (708)
.+...+.+|...|.+++|+|++++|++++.|+.|++||..+ ++ ....+.+|...|.++++
T Consensus 297 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~--------~~--------~~~~l~~h~~~v~~v~~ 360 (393)
T 1erj_A 297 PNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKS--------GN--------PLLMLQGHRNSVISVAV 360 (393)
T ss_dssp ----CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTT--------CC--------EEEEEECCSSCEEEEEE
T ss_pred CCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCC--------Ce--------EEEEECCCCCCEEEEEe
Confidence 34566788999999999999999999999999999999998 76 67788999999999998
Q ss_pred e--------CCEEEEEcCCCeEEEEeCCC
Q psy12614 311 H--------GNRLYSGGLDSYLSLSYYPP 331 (708)
Q Consensus 311 ~--------~~~l~s~~~d~~i~iw~~~~ 331 (708)
+ +++|++++.|+.|++|++..
T Consensus 361 ~~~~~~~p~~~~l~sgs~Dg~i~iW~~~~ 389 (393)
T 1erj_A 361 ANGSSLGPEYNVFATGSGDCKARIWKYKK 389 (393)
T ss_dssp CSSCTTCTTCEEEEEEETTSEEEEEEEEE
T ss_pred cCCcCcCCCCCEEEEECCCCcEEECcccc
Confidence 7 36899999999999999753
|
| >2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-39 Score=325.54 Aligned_cols=298 Identities=14% Similarity=0.189 Sum_probs=242.7
Q ss_pred eeeeeeeeccCCCCcEEEEEE-----cC-CCCEEEEEeCCCcEEEEeCCCCC------eEEEEEecCCCCCcEEEEEEe-
Q psy12614 14 YGVHNIKFYAPEPKVINCIAC-----EP-KSSRLAVSRADQSIEIWDISETP------HVDRVFIGDPLSNSIECLTWF- 80 (708)
Q Consensus 14 ~~~~~~~~~~~h~~~v~~~~~-----s~-~~~~la~~~~dg~v~iwd~~~~~------~~~~~~~~h~~~~~v~~l~~~- 80 (708)
........+.+|.+.|++++| ++ ++++||+|+.|++|+|||+.+++ .....+.+|. ..|.+++|+
T Consensus 9 ~~~~~~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~--~~V~~~~~~~ 86 (343)
T 2xzm_R 9 IQVVKRGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHN--HFVSDLALSQ 86 (343)
T ss_dssp EEEEEEEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCS--SCEEEEEECS
T ss_pred eEeeeeeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCC--CceEEEEECC
Confidence 345556789999999999999 77 99999999999999999997642 2334789999 999999999
Q ss_pred -CCEEEEEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEE
Q psy12614 81 -NDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRIL 159 (708)
Q Consensus 81 -~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~ 159 (708)
+.+|++++.|++|++||+.+++++..+.+|...|.+++|+|++++|++++.|+.|++||+.............|...|.
T Consensus 87 ~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~ 166 (343)
T 2xzm_R 87 ENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAEKENHSDWVS 166 (343)
T ss_dssp STTEEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEE
T ss_pred CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeeeecccCCCceee
Confidence 8899999999999999999999999999999999999999999999999999999999998554432122347889999
Q ss_pred EEEECCCC----------CEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEE
Q psy12614 160 CTAWHSSG----------DYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVR 227 (708)
Q Consensus 160 ~~~~s~d~----------~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~ 227 (708)
+++|+|++ .+|++++.| .|++||. +++....+. .|...|.+++|+|+|+ +++++.||.|+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~-~~~~~~~~~-------~h~~~v~~~~~s~~g~~l~sgs~dg~v~ 238 (343)
T 2xzm_R 167 CVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNT-NFQIRYTFK-------AHESNVNHLSISPNGKYIATGGKDKKLL 238 (343)
T ss_dssp EEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEET-TTEEEEEEE-------CCSSCEEEEEECTTSSEEEEEETTCEEE
T ss_pred eeeeccccccccccCCCCCEEEEEcCCCEEEEEcC-CCceeEEEc-------CccccceEEEECCCCCEEEEEcCCCeEE
Confidence 99999987 799999999 9999994 455555554 3478899999999995 99999999999
Q ss_pred EEeCCC-CeeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceE-----EeEEEecc
Q psy12614 228 FWDGKT-GVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWV-----RSVNRVIH 301 (708)
Q Consensus 228 ~wd~~~-~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~-----~~~~~~~~ 301 (708)
+||+.. ......+. +...|.+++|+|++++++++ .|+.|++|++.+ ++........ ......+|
T Consensus 239 iwd~~~~~~~~~~~~-~~~~v~~v~~sp~~~~la~~-~d~~v~iw~~~~--------~~~~~~~~~~~~~~~~~~~~~~~ 308 (343)
T 2xzm_R 239 IWDILNLTYPQREFD-AGSTINQIAFNPKLQWVAVG-TDQGVKIFNLMT--------QSKAPVCTIEAEPITKAEGQKGK 308 (343)
T ss_dssp EEESSCCSSCSEEEE-CSSCEEEEEECSSSCEEEEE-ESSCEEEEESSS--------CCSCSEEECCCCSGGGBTTBCCS
T ss_pred EEECCCCcccceeec-CCCcEEEEEECCCCCEEEEE-CCCCEEEEEeCC--------CCCCceEEeecCcchhhhhhcCC
Confidence 999944 44444443 55679999999999877654 588899999987 3200000000 00012368
Q ss_pred ccceEEEEEe--CCEEEEEcCCCeEEEEeCCC
Q psy12614 302 EGDVKSLALH--GNRLYSGGLDSYLSLSYYPP 331 (708)
Q Consensus 302 ~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~ 331 (708)
...|.+++|+ +.+|++|+.||.|++|++.+
T Consensus 309 ~~~v~~~~~sp~g~~l~sg~~Dg~v~~w~~~~ 340 (343)
T 2xzm_R 309 NPQCTSLAWNALGKKLFAGFTDGVIRTFSFET 340 (343)
T ss_dssp CCCEEEEEECSSSCCEEEEETTSEEEEEEEEE
T ss_pred CCceEEEEECCCCCeEEEecCCceEEEEEEEc
Confidence 8889999999 89999999999999999854
|
| >1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-39 Score=321.88 Aligned_cols=284 Identities=17% Similarity=0.312 Sum_probs=249.9
Q ss_pred CeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEE
Q psy12614 101 LNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVR 179 (708)
Q Consensus 101 ~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~ 179 (708)
.+...++.+|.+.|++++|+|++++|++|+.||.|++||+.+++.. ..+..|...|.+++|+|++++|++++.| .|+
T Consensus 45 ~~~~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~--~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~ 122 (340)
T 1got_B 45 MRTRRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKV--HAIPLRSSWVMTCAYAPSGNYVACGGLDNICS 122 (340)
T ss_dssp CCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEE--EEEECSSSCEEEEEECTTSSEEEEEETTCEEE
T ss_pred chhheeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcc--eEeecCCccEEEEEECCCCCEEEEEeCCCeEE
Confidence 3567788999999999999999999999999999999999998877 6778899999999999999999999999 999
Q ss_pred EEEcCCCce----EEEEEecccCCCCCceeEEEEEEccCCEEEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCC
Q psy12614 180 VWDIHKGHA----IHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSED 255 (708)
Q Consensus 180 iwd~~~~~~----~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~ 255 (708)
+|++.++.. ...+. +|...+.++.|++++.+++++.|+.|++||+++++.+..+.+|...|.+++|+|+
T Consensus 123 iw~~~~~~~~~~~~~~~~-------~h~~~v~~~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~ 195 (340)
T 1got_B 123 IYNLKTREGNVRVSRELA-------GHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPD 195 (340)
T ss_dssp EEETTTCSBSCEEEEEEE-------CCSSCEEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTT
T ss_pred EEECccCCCcceeEEEec-------CCCccEEEEEECCCCcEEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCC
Confidence 999987642 22222 4488999999999999999999999999999999999999999999999999999
Q ss_pred CCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEEEcCCCeEEEEeCCCCc
Q psy12614 256 ENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSGGLDSYLSLSYYPPKT 333 (708)
Q Consensus 256 ~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~~~ 333 (708)
++++++++.|+.|++||+.+ +. ....+.+|...|.+++|+ +++|++++.|+.|++||+....
T Consensus 196 ~~~l~sg~~d~~v~~wd~~~--------~~--------~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~ 259 (340)
T 1got_B 196 TRLFVSGACDASAKLWDVRE--------GM--------CRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQ 259 (340)
T ss_dssp SSEEEEEETTSCEEEEETTT--------CS--------EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE
T ss_pred CCEEEEEeCCCcEEEEECCC--------Ce--------eEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCc
Confidence 99999999999999999998 65 677888999999999999 8999999999999999998765
Q ss_pred e-eecC--ccCCCCceEEEEcCCcEEEEE-cCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEE
Q psy12614 334 L-VKYP--CTLAQSTPVSLAKDIQHVLLQ-YTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCS 409 (708)
Q Consensus 334 ~-~~~~--~~~~~~~~~~~s~~~~~l~~~-~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 409 (708)
. ..+. .......+++|+|++++++++ .++.|++||..+.. ......+|...|.++
T Consensus 260 ~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~---------------------~~~~~~~h~~~v~~~ 318 (340)
T 1got_B 260 ELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKAD---------------------RAGVLAGHDNRVSCL 318 (340)
T ss_dssp EEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC---------------------EEEEEECCSSCEEEE
T ss_pred EEEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEcccCc---------------------EeeEeecCCCcEEEE
Confidence 3 2222 112245789999999999985 88999999988755 344556899999999
Q ss_pred EeCCCCcEEEEEc-CCceEEEE
Q psy12614 410 VVSNDGKYVAYST-ESCVRLHS 430 (708)
Q Consensus 410 ~~s~~g~~l~~~~-d~~i~i~~ 430 (708)
+|+|+|++|+++. |+.|++|+
T Consensus 319 ~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 319 GVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp EECTTSSCEEEEETTSCEEEEC
T ss_pred EEcCCCCEEEEEcCCccEEecC
Confidence 9999999999855 99999996
|
| >2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-39 Score=319.10 Aligned_cols=288 Identities=15% Similarity=0.249 Sum_probs=234.0
Q ss_pred eeeeccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCe-EEEEE-ec-CCCCCcEEEEEEe--CCEEEEEcCCCc
Q psy12614 18 NIKFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPH-VDRVF-IG-DPLSNSIECLTWF--NDRLFSGGLQGF 92 (708)
Q Consensus 18 ~~~~~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~-~~~~~-~~-h~~~~~v~~l~~~--~~~l~s~~~d~~ 92 (708)
..+.+.+|.+.|.+++|+|+ +||+|+.||.|+|||+.++.. ....+ .+ |. ..|.+++|+ +++|++++.|++
T Consensus 6 ~~~~~~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~--~~v~~v~~sp~~~~las~s~D~~ 81 (330)
T 2hes_X 6 LIKSLKLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHK--KAIRSVAWRPHTSLLAAGSFDST 81 (330)
T ss_dssp EEEEEECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCC--SCEEEEEECTTSSEEEEEETTSC
T ss_pred cceeeccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCcc--CCEEEEEECCCCCEEEEEeCCCc
Confidence 45678899999999999998 999999999999999987532 22355 44 88 999999999 899999999999
Q ss_pred EEEEECCC-------CeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCC--cEEEEEecccccccEEEEEE
Q psy12614 93 VNEYDMRR-------LNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDE--GLLYEKLLDRQQGRILCTAW 163 (708)
Q Consensus 93 i~vwd~~~-------~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~--~~~~~~~~~~~~~~v~~~~~ 163 (708)
|++||+.. .+++..+.+|...|.+++|+|++++||+|+.|+.|++||+... .......+.+|...|.+++|
T Consensus 82 v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~ 161 (330)
T 2hes_X 82 VSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIW 161 (330)
T ss_dssp EEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEE
T ss_pred EEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEE
Confidence 99999853 4567788999999999999999999999999999999999532 12223678899999999999
Q ss_pred CCCCCEEEEecCC-eEEEEEcCCC--ceEEEEEecccCCCCCceeEEEEEEccC--C-EEEEEcCCCcEEEEeCCCC---
Q psy12614 164 HSSGDYLVTGCAA-AVRVWDIHKG--HAIHKMSLDKSSKFSKNTAVWCVAFCAD--F-TIITGDSGGFVRFWDGKTG--- 234 (708)
Q Consensus 164 s~d~~~l~~~~~d-~i~iwd~~~~--~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~-~l~~~~~dg~i~~wd~~~~--- 234 (708)
+|++++|++++.| +|++||..++ +++..+. +|...|++++|+|+ + .+++++.|+.|++||+..+
T Consensus 162 ~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~-------~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~ 234 (330)
T 2hes_X 162 HPSEALLASSSYDDTVRIWKDYDDDWECVAVLN-------GHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDED 234 (330)
T ss_dssp CSSSSEEEEEETTSCEEEEEEETTEEEEEEEEC-------CCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTT
T ss_pred CCCCCEEEEEcCCCeEEEEECCCCCeeEEEEcc-------CCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCcc
Confidence 9999999999999 9999998876 3444443 44889999999998 5 4899999999999998654
Q ss_pred -----eeEEEeec-cccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeE-EEecccc-ceE
Q psy12614 235 -----VQWSDVKT-HKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSV-NRVIHEG-DVK 306 (708)
Q Consensus 235 -----~~~~~~~~-~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~-~v~ 306 (708)
.....+.. |...|.+++|++++ +|++++.||.|++|+..+ ++ |.... ...+|.. .|.
T Consensus 235 ~~~~~~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~--------~~------~~~~~~~~~~h~~~~v~ 299 (330)
T 2hes_X 235 DQQEWVCEAILPDVHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVD--------GE------WKVFAKRALCHGVYEIN 299 (330)
T ss_dssp SCEEEEEEEECCSCCSSCEEEEEECTTS-CEEEEETTSCEEEEEEET--------TE------EEEEEEESCTTTTSCEE
T ss_pred ccceeEEeeecccccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCC--------Cc------eEEEeccccccccceEE
Confidence 34455554 89999999999765 899999999999999987 42 21222 2356776 899
Q ss_pred EEEEe----CCEEEEEcCCCeEEEEeCCC
Q psy12614 307 SLALH----GNRLYSGGLDSYLSLSYYPP 331 (708)
Q Consensus 307 ~l~~~----~~~l~s~~~d~~i~iw~~~~ 331 (708)
+++|+ +.+|++++.|+.|++|+++.
T Consensus 300 ~v~~~~~~~~~~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 300 VVKWLELNGKTILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp EEEEC-----CCEEEEETTSEEEEEEC--
T ss_pred EEEEecCCCceEEEEecCCCcEEEEEecc
Confidence 99997 56899999999999999864
|
| >3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-38 Score=319.22 Aligned_cols=312 Identities=13% Similarity=0.160 Sum_probs=245.8
Q ss_pred EEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECCCCeEeEE---EeecCCceEEEEEecCCCEEEEEeCCCcEEE
Q psy12614 63 RVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMRRLNIKSS---TAVTSGTCWCLSVHKKKRLLAAGTEQGHINL 137 (708)
Q Consensus 63 ~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~~~~~~---~~~~~~~v~~~~~s~~~~~la~~~~d~~i~i 137 (708)
..+.+|. ...|.+++|+ +++|++++.|++|++||++++..... ..+|...|.+++|+|++++||+|+.|+.|++
T Consensus 9 ~~~~~h~-~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~i 87 (345)
T 3fm0_A 9 GRVPAHP-DSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCI 87 (345)
T ss_dssp EEECCST-TSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred eeecCCC-CCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEE
Confidence 4888998 3399999999 99999999999999999998864322 3589999999999999999999999999999
Q ss_pred EEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE
Q psy12614 138 FQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT 216 (708)
Q Consensus 138 wd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 216 (708)
||+..+.......+.+|...|.+++|+|++++|++++.| .|++||+.++.....+.... .|...|.+++|+|++.
T Consensus 88 w~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~----~h~~~v~~~~~~p~~~ 163 (345)
T 3fm0_A 88 WKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLN----SHTQDVKHVVWHPSQE 163 (345)
T ss_dssp EEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEEC----CCCSCEEEEEECSSSS
T ss_pred EEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEec----CcCCCeEEEEECCCCC
Confidence 999988665557889999999999999999999999999 99999998775443332221 4488899999999996
Q ss_pred -EEEEcCCCcEEEEeCCCCe--eEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCccc-ccCCCCCCCCcce
Q psy12614 217 -IITGDSGGFVRFWDGKTGV--QWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQV-CSTSGPEQGSSVW 292 (708)
Q Consensus 217 -l~~~~~dg~i~~wd~~~~~--~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~-~~~~g~~~~~~~~ 292 (708)
+++++.|+.|++||.++++ ....+.+|...|.+++|+|++++|++++.|+.|++|+....... ..... .....|
T Consensus 164 ~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~--~~~~~~ 241 (345)
T 3fm0_A 164 LLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACS--GSDPSW 241 (345)
T ss_dssp CEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC-----CEE
T ss_pred EEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceee--ccCCcc
Confidence 9999999999999998875 45678899999999999999999999999999999997541100 00000 011234
Q ss_pred EEeEEEec-cccceEEEEEe--CCEEEEEcCCCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEEEcCCeEEEEEe
Q psy12614 293 VRSVNRVI-HEGDVKSLALH--GNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSL 369 (708)
Q Consensus 293 ~~~~~~~~-~~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~ 369 (708)
.....+.+ |...|.+++|+ +..|++++.|+.|++|+.........+
T Consensus 242 ~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~------------------------------- 290 (345)
T 3fm0_A 242 KCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQP------------------------------- 290 (345)
T ss_dssp EEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSC-------------------------------
T ss_pred ceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCccee-------------------------------
Confidence 44445554 88889999998 788999999999999987543210000
Q ss_pred cCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCc-EEEEE-cCCceEEEEEEe
Q psy12614 370 GSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGK-YVAYS-TESCVRLHSLDL 433 (708)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~-~l~~~-~d~~i~i~~~~~ 433 (708)
..........+|...|.+++|+|++. +||++ .||+|++|++..
T Consensus 291 ---------------------~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~ 335 (345)
T 3fm0_A 291 ---------------------TFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQR 335 (345)
T ss_dssp ---------------------CEEEEEEETTSSSSCEEEEEECSSSTTEEEEEETTSCEEEEEECC
T ss_pred ---------------------eEEEEeeecccccCcEeEeEEeCCCceEEEEcCCCCcEEEEEecC
Confidence 00011222346889999999999984 88874 599999999986
|
| >2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-39 Score=313.89 Aligned_cols=284 Identities=16% Similarity=0.210 Sum_probs=249.8
Q ss_pred EEEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEE
Q psy12614 62 DRVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQ 139 (708)
Q Consensus 62 ~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd 139 (708)
.+++.+|. ..|.+++|+ +++|++++.||+|++||+++++.+..+..|...|.+++|+|++++|++|+.|+.|++||
T Consensus 6 ~~~~~~h~--~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd 83 (304)
T 2ynn_A 6 KKTFSNRS--DRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFN 83 (304)
T ss_dssp EEEEEEEC--SCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEE
T ss_pred EEeecCCC--CceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEE
Confidence 35899999 999999999 99999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEcc-CC-E
Q psy12614 140 ISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCA-DF-T 216 (708)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~-~ 216 (708)
+.+++.+ ..+.+|.+.|.+++|+|++++|++++.| +|++||++++........ +|...|.+++|+| ++ .
T Consensus 84 ~~~~~~~--~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~------~h~~~v~~v~~~p~~~~~ 155 (304)
T 2ynn_A 84 YNTGEKV--VDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFE------GHEHFVMCVAFNPKDPST 155 (304)
T ss_dssp TTTCCEE--EEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEEC------CCCSCEEEEEECTTCTTE
T ss_pred CCCCcEE--EEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhc------ccCCcEEEEEECCCCCCE
Confidence 9999887 7788999999999999999999999999 999999998855543333 3488999999999 44 5
Q ss_pred EEEEcCCCcEEEEeCCCCeeEEEee-ccccCeEEEEEeC--CCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceE
Q psy12614 217 IITGDSGGFVRFWDGKTGVQWSDVK-THKKDILALTVSE--DENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWV 293 (708)
Q Consensus 217 l~~~~~dg~i~~wd~~~~~~~~~~~-~~~~~i~~~~~s~--~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~ 293 (708)
+++|+.|+.|++||+.++.....+. +|...+..+.|+| ++++|++++.|+.|++||+.+ ++
T Consensus 156 l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~--------~~-------- 219 (304)
T 2ynn_A 156 FASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQT--------KS-------- 219 (304)
T ss_dssp EEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTT--------TE--------
T ss_pred EEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCC--------Cc--------
Confidence 9999999999999998877655554 5668899999987 778999999999999999998 65
Q ss_pred EeEEEeccccceEEEEEe--CCEEEEEcCCCeEEEEeCCCCce-eecCccCCCCceEEEEcCCc--EEEEEcCCeEEEEE
Q psy12614 294 RSVNRVIHEGDVKSLALH--GNRLYSGGLDSYLSLSYYPPKTL-VKYPCTLAQSTPVSLAKDIQ--HVLLQYTSHLELWS 368 (708)
Q Consensus 294 ~~~~~~~~~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~~~~-~~~~~~~~~~~~~~~s~~~~--~l~~~~~~~i~i~~ 368 (708)
....+.+|...|.+++|+ +.+|++++.|+.|++||+.+..+ ..+..+.....+++++|++. +++++.++.+.+|+
T Consensus 220 ~~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~asg~~~g~~~~~ 299 (304)
T 2ynn_A 220 CVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVLS 299 (304)
T ss_dssp EEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCSSSSEEEEEECTTCGGGCEEEEETTEEEEEE
T ss_pred cceeeCCCCCCEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeeccCCCccEEEEEECCCCCceEEEEecCCceEEEE
Confidence 678889999999999999 78999999999999999998764 44443445667889899875 58888999999998
Q ss_pred ecC
Q psy12614 369 LGS 371 (708)
Q Consensus 369 ~~~ 371 (708)
+..
T Consensus 300 ~~~ 302 (304)
T 2ynn_A 300 LGN 302 (304)
T ss_dssp CC-
T ss_pred ecc
Confidence 875
|
| >1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-39 Score=322.89 Aligned_cols=317 Identities=16% Similarity=0.211 Sum_probs=270.5
Q ss_pred CCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECCCCe
Q psy12614 25 EPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMRRLN 102 (708)
Q Consensus 25 h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~~ 102 (708)
|.+.|.+++|+|||+++|++..++.+.+|+........ ...+|. ..|.+++|+ +++|++++ ||.|++||+.+++
T Consensus 8 ~~~~v~~~~~s~dg~~~~~~~~~~~~~~~~~~~~~~~~-~~~~h~--~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~ 83 (337)
T 1gxr_A 8 GSKPAYSFHVTADGQMQPVPFPPDALIGPGIPRHARQI-NTLNHG--EVVCAVTISNPTRHVYTGG-KGCVKVWDISHPG 83 (337)
T ss_dssp EEEECCEEEECSSSCEEECCCCTTSSSSTTCCSEEEEE-EEECCS--SCCCEEEECSSSSEEEEEC-BSEEEEEETTSTT
T ss_pred cCCceeEEEECCCCCEEEeecCCCcEeccccCCccccc-eeccCC--CceEEEEEecCCcEEEEcC-CCeEEEEECCCCC
Confidence 45789999999999999999888888787766654444 455788 999999999 88899988 9999999998865
Q ss_pred E---eEEEe--ecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-
Q psy12614 103 I---KSSTA--VTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA- 176 (708)
Q Consensus 103 ~---~~~~~--~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d- 176 (708)
. ...+. .|...|.+++|+|++++|++++.|+.|++||+.+++......+..|...|.+++|+|++++|++++.+
T Consensus 84 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg 163 (337)
T 1gxr_A 84 NKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDG 163 (337)
T ss_dssp CCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTS
T ss_pred ceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCC
Confidence 3 33333 78999999999999999999999999999999998855457788899999999999999999999999
Q ss_pred eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCC
Q psy12614 177 AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSED 255 (708)
Q Consensus 177 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~ 255 (708)
.|++||+.+++.+..+.. +...+.+++|+|++. +++++.||.|++||+++++.+..+. +...+.+++|+|+
T Consensus 164 ~v~~~d~~~~~~~~~~~~-------~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~-~~~~v~~~~~s~~ 235 (337)
T 1gxr_A 164 NIAVWDLHNQTLVRQFQG-------HTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHD-FTSQIFSLGYCPT 235 (337)
T ss_dssp CEEEEETTTTEEEEEECC-------CSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECTT
T ss_pred cEEEEeCCCCceeeeeec-------ccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeec-CCCceEEEEECCC
Confidence 999999999988887753 378899999999995 8999999999999999998888775 7889999999999
Q ss_pred CCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEEEcCCCeEEEEeCCCCc
Q psy12614 256 ENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSGGLDSYLSLSYYPPKT 333 (708)
Q Consensus 256 ~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~~~ 333 (708)
+++|++++.++.|++|++.+ ++ ...+..|...|.+++|+ +++|++++.|+.+++|++.+..
T Consensus 236 ~~~l~~~~~~~~i~~~~~~~--------~~---------~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~ 298 (337)
T 1gxr_A 236 GEWLAVGMESSNVEVLHVNK--------PD---------KYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGA 298 (337)
T ss_dssp SSEEEEEETTSCEEEEETTS--------SC---------EEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC
T ss_pred CCEEEEEcCCCcEEEEECCC--------CC---------eEEEcCCccceeEEEECCCCCEEEEecCCCcEEEEECCCCe
Confidence 99999999999999999988 53 34567889999999999 8899999999999988885542
Q ss_pred eeecCccCCCCceEEEEcCCcEEEEEcCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCC
Q psy12614 334 LVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSN 413 (708)
Q Consensus 334 ~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~ 413 (708)
. + ....+...+.+++|+|
T Consensus 299 ~------------------------------------------------------------~--~~~~~~~~v~~~~~s~ 316 (337)
T 1gxr_A 299 S------------------------------------------------------------I--FQSKESSSVLSCDISV 316 (337)
T ss_dssp E------------------------------------------------------------E--EEEECSSCEEEEEECT
T ss_pred E------------------------------------------------------------E--EEecCCCcEEEEEECC
Confidence 1 1 1124567899999999
Q ss_pred CCcEEEEE-cCCceEEEEEE
Q psy12614 414 DGKYVAYS-TESCVRLHSLD 432 (708)
Q Consensus 414 ~g~~l~~~-~d~~i~i~~~~ 432 (708)
++++|+++ .||.|++|++.
T Consensus 317 ~~~~l~~~~~dg~i~iw~~~ 336 (337)
T 1gxr_A 317 DDKYIVTGSGDKKATVYEVI 336 (337)
T ss_dssp TSCEEEEEETTSCEEEEEEE
T ss_pred CCCEEEEecCCCeEEEEEEe
Confidence 99999985 49999999974
|
| >1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-39 Score=335.09 Aligned_cols=339 Identities=11% Similarity=0.136 Sum_probs=275.2
Q ss_pred cCCCCcEEEEEEcCCCC-EEEEEeCCCcEEEEeC----CCCCe-----EEEEEec----------CCCCCcEEEEEEe--
Q psy12614 23 APEPKVINCIACEPKSS-RLAVSRADQSIEIWDI----SETPH-----VDRVFIG----------DPLSNSIECLTWF-- 80 (708)
Q Consensus 23 ~~h~~~v~~~~~s~~~~-~la~~~~dg~v~iwd~----~~~~~-----~~~~~~~----------h~~~~~v~~l~~~-- 80 (708)
..|.+.|++++|+|+++ +||+|+.||.|++||+ .+++. ....+.. |. ..|.+++|+
T Consensus 42 ~~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~v~~~~~s~~ 119 (425)
T 1r5m_A 42 IVKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTT--NQVTCLAWSHD 119 (425)
T ss_dssp EEECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------C--BCEEEEEECTT
T ss_pred eeccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCC--CceEEEEEcCC
Confidence 34669999999999999 9999999999999999 88772 2224443 56 799999999
Q ss_pred CCEEEEEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEeccccccc---
Q psy12614 81 NDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGR--- 157 (708)
Q Consensus 81 ~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~--- 157 (708)
+++|++++.||.|++|| .+++.+..+..|...|.+++|+|++++|++++.|+.|++||+.+++.. ..+..+...
T Consensus 120 ~~~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~--~~~~~~~~~~~~ 196 (425)
T 1r5m_A 120 GNSIVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVM--QHFELKETGGSS 196 (425)
T ss_dssp SSEEEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEE--EEECCC------
T ss_pred CCEEEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEE--EEeeccccCccc
Confidence 89999999999999999 778888999999999999999999999999999999999999999877 556666655
Q ss_pred ------------EEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCC
Q psy12614 158 ------------ILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSG 223 (708)
Q Consensus 158 ------------v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~d 223 (708)
+.+++|+|++ .+++++.+ .|++||+.+++.+..+.. +...|.+++|+|+++ +++++.|
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~i~~~d~~~~~~~~~~~~-------~~~~i~~~~~~~~~~~l~~~~~d 268 (425)
T 1r5m_A 197 INAENHSGDGSLGVDVEWVDDD-KFVIPGPKGAIFVYQITEKTPTGKLIG-------HHGPISVLEFNDTNKLLLSASDD 268 (425)
T ss_dssp ---------CCCBSCCEEEETT-EEEEECGGGCEEEEETTCSSCSEEECC-------CSSCEEEEEEETTTTEEEEEETT
T ss_pred eeeccccCCcceeeEEEEcCCC-EEEEEcCCCeEEEEEcCCCceeeeecc-------CCCceEEEEECCCCCEEEEEcCC
Confidence 8999999986 57778888 999999999988877753 378899999999995 8999999
Q ss_pred CcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEecccc
Q psy12614 224 GFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEG 303 (708)
Q Consensus 224 g~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 303 (708)
|.|++||+.+++.+..+..|...|.+++|+|++ ++++++.|+.|++||+.+ ++ ....+..|..
T Consensus 269 ~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~--------~~--------~~~~~~~~~~ 331 (425)
T 1r5m_A 269 GTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQ--------NT--------LLALSIVDGV 331 (425)
T ss_dssp SCEEEECSSSBSCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTT--------TE--------EEEEEECTTC
T ss_pred CEEEEEECCCCccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCC--------Cc--------EeEecccCCc
Confidence 999999999999999999999999999999999 999999999999999988 65 6677788999
Q ss_pred ceEEEEEe--CCEEEEEcCCCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEEEcCCeEEEEEecCCCCCCCCCCC
Q psy12614 304 DVKSLALH--GNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHS 381 (708)
Q Consensus 304 ~v~~l~~~--~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~ 381 (708)
.|.+++|+ +.+|++++.|+.|++|++.+....... +. ...++ ++..
T Consensus 332 ~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~--------~~---------~~~~~---~~~~------------ 379 (425)
T 1r5m_A 332 PIFAGRISQDGQKYAVAFMDGQVNVYDLKKLNSKSRS--------LY---------GNRDG---ILNP------------ 379 (425)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEECHHHHC----------------------------------C------------
T ss_pred cEEEEEEcCCCCEEEEEECCCeEEEEECCCCccceee--------ee---------ccccc---ccCc------------
Confidence 99999999 889999999999999999754311110 00 00000 0110
Q ss_pred CCCcccCCCCceEEEEEEecCCC--ceEEEEeCCCCcEEEEE-cCCceEEEEEE
Q psy12614 382 NTTGVPLLSFPRLIVKMSAVNNA--TIRCSVVSNDGKYVAYS-TESCVRLHSLD 432 (708)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~--~i~~~~~s~~g~~l~~~-~d~~i~i~~~~ 432 (708)
.+.........+.. .|.+++|+|++++|+++ .||.|++|+++
T Consensus 380 ---------~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 380 ---------LPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYSLQEGSVVAIP 424 (425)
T ss_dssp ---------EECCEEEEECCTTCCCCEEEEEECTTSSEEEEEESSSCCEEEECC
T ss_pred ---------ccchhhhhhcCcccCCceEEEEccCCCceEEEEecCceEEEEeec
Confidence 01123444455655 99999999999999885 59999999975
|
| >2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-41 Score=347.09 Aligned_cols=359 Identities=13% Similarity=0.184 Sum_probs=279.9
Q ss_pred CcEEEEEEcCCCC-EEEEE----------eCCCcEEEEeCCCCCeE-EEEEecCCCCCcEEEEEEe--CCEEEEEcCCCc
Q psy12614 27 KVINCIACEPKSS-RLAVS----------RADQSIEIWDISETPHV-DRVFIGDPLSNSIECLTWF--NDRLFSGGLQGF 92 (708)
Q Consensus 27 ~~v~~~~~s~~~~-~la~~----------~~dg~v~iwd~~~~~~~-~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~ 92 (708)
..|.+++|+|+++ +||+| +.||.|+|||+.++... ......|. ..|.+++|+ +++|++++.||.
T Consensus 13 ~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~--~~v~~~~~s~~~~~l~~~~~dg~ 90 (416)
T 2pm9_A 13 SRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASLQVD--SKFNDLDWSHNNKIIAGALDNGS 90 (416)
T ss_dssp EESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCCCCS--SCEEEEEECSSSSCEEEEESSSC
T ss_pred hhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEEecC--CceEEEEECCCCCeEEEEccCCe
Confidence 5688999999997 99999 88999999999987521 01223577 899999999 889999999999
Q ss_pred EEEEECCC----CeEeEEEeecCCceEEEEEecC-CCEEEEEeCCCcEEEEEccCCc------EEE-EEecccccccEEE
Q psy12614 93 VNEYDMRR----LNIKSSTAVTSGTCWCLSVHKK-KRLLAAGTEQGHINLFQISDEG------LLY-EKLLDRQQGRILC 160 (708)
Q Consensus 93 i~vwd~~~----~~~~~~~~~~~~~v~~~~~s~~-~~~la~~~~d~~i~iwd~~~~~------~~~-~~~~~~~~~~v~~ 160 (708)
|++||+.+ .+.+..+.+|...|.+++|+|+ +++|++++.|+.|++||+.+++ ... ...+..|...|.+
T Consensus 91 v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 170 (416)
T 2pm9_A 91 LELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVIS 170 (416)
T ss_dssp EEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCE
T ss_pred EEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeE
Confidence 99999998 4588889999999999999998 8999999999999999999876 321 1234678899999
Q ss_pred EEECCC-CCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCC--EEEEEcCCC---cEEEEeCCC
Q psy12614 161 TAWHSS-GDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADF--TIITGDSGG---FVRFWDGKT 233 (708)
Q Consensus 161 ~~~s~d-~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~l~~~~~dg---~i~~wd~~~ 233 (708)
++|+|+ +.+|++++.| .|++||+.+++.+..+....... ++...+.+++|+|++ .+++++.++ .|++||+++
T Consensus 171 ~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~ 249 (416)
T 2pm9_A 171 LAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNS-GIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRN 249 (416)
T ss_dssp EEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSS-CCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTS
T ss_pred EEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEecccccc-ccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCC
Confidence 999999 7899999999 99999999999888876542111 226789999999997 488999998 999999998
Q ss_pred C-eeEEEee-ccccCeEEEEEeC-CCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEE
Q psy12614 234 G-VQWSDVK-THKKDILALTVSE-DENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLAL 310 (708)
Q Consensus 234 ~-~~~~~~~-~~~~~i~~~~~s~-~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~ 310 (708)
+ ..+..+. +|...|.+++|+| ++++|++++.|+.|++||+.+ ++ ....+..|...|.+++|
T Consensus 250 ~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~--------~~--------~~~~~~~~~~~v~~~~~ 313 (416)
T 2pm9_A 250 ANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPES--------AE--------QLSQFPARGNWCFKTKF 313 (416)
T ss_dssp TTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSS--------CC--------EEEEEECSSSCCCCEEE
T ss_pred CCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCC--------Cc--------cceeecCCCCceEEEEE
Confidence 6 6677777 8999999999999 999999999999999999998 76 67788899999999999
Q ss_pred e--C-CEEEEEcCCCeEEEEeCCCCceeecCcc---CCCCceEEEEcCCcEEEEEcCCeEEEEEecCCCCCCCCCCCCCC
Q psy12614 311 H--G-NRLYSGGLDSYLSLSYYPPKTLVKYPCT---LAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTT 384 (708)
Q Consensus 311 ~--~-~~l~s~~~d~~i~iw~~~~~~~~~~~~~---~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~~~ 384 (708)
+ + .+|++++.|+.|++|++.+......... ........+.+.+..++.... + ..
T Consensus 314 s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~------------------~~ 373 (416)
T 2pm9_A 314 APEAPDLFACASFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEK--P------------------SV 373 (416)
T ss_dssp CTTCTTEEEECCSSSEEEEEESCCCCCSSCC----------------------CCSC--C------------------CS
T ss_pred CCCCCCEEEEEecCCcEEEEEccCCCCCcccccccccccCCcccccccccccccccc--c------------------cc
Confidence 9 5 7999999999999999987652221100 000011111111111110000 0 00
Q ss_pred cccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEEEc-CCceEEEEEEe
Q psy12614 385 GVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYST-ESCVRLHSLDL 433 (708)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~-d~~i~i~~~~~ 433 (708)
..+ .....+...+.+++|+|+|++|+++. |+.|+||++.+
T Consensus 374 --------~~~-~~~~~~~~~~~~~~~s~dg~~la~~~~d~~v~~w~~~~ 414 (416)
T 2pm9_A 374 --------FHL-QAPTWYGEPSPAAHWAFGGKLVQITPDGKGVSITNPKI 414 (416)
T ss_dssp --------SCC-CCCSTTCCCSCCCEEETTTEEECBCTTSSCBCCBCCCC
T ss_pred --------ccc-cCCccccCCccceEEeeCCeEEEEeCCCCeEEEEEecc
Confidence 011 11123566778999999999999966 99999999875
|
| >2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-38 Score=326.18 Aligned_cols=322 Identities=16% Similarity=0.282 Sum_probs=278.5
Q ss_pred eeeeccCCCCcE-EEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEeCCEEEEEcCCCcEEEE
Q psy12614 18 NIKFYAPEPKVI-NCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWFNDRLFSGGLQGFVNEY 96 (708)
Q Consensus 18 ~~~~~~~h~~~v-~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~~~~l~s~~~d~~i~vw 96 (708)
..+.+.+|.+.| +| +++++++||+|+.||.|++||+.+++.+. .+.+|. ..|.+++|+++.|++++.||+|++|
T Consensus 110 ~~~~l~~h~~~v~~~--~~~~g~~l~sg~~dg~i~vwd~~~~~~~~-~~~~h~--~~v~~~~~~~~~l~s~~~dg~i~vw 184 (445)
T 2ovr_B 110 SPKVLKGHDDHVITC--LQFCGNRIVSGSDDNTLKVWSAVTGKCLR-TLVGHT--GGVWSSQMRDNIIISGSTDRTLKVW 184 (445)
T ss_dssp CCEEEECSTTSCEEE--EEEETTEEEEEETTSCEEEEETTTCCEEE-ECCCCS--SCEEEEEEETTEEEEEETTSCEEEE
T ss_pred eeEEecccCCCcEEE--EEEcCCEEEEEECCCcEEEEECCCCcEEE-EEcCCC--CCEEEEEecCCEEEEEeCCCeEEEE
Confidence 345688999875 55 45568999999999999999999998876 899999 9999999999999999999999999
Q ss_pred ECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC
Q psy12614 97 DMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA 176 (708)
Q Consensus 97 d~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d 176 (708)
|+.+++.+..+.+|...|.+++|+ ++.+++|+.||.|++||+.+++.. ..+.+|...|.+++| +++++++++.|
T Consensus 185 d~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~~--~~~~~~~~~v~~~~~--~~~~l~~~~~d 258 (445)
T 2ovr_B 185 NAETGECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCL--HVLMGHVAAVRCVQY--DGRRVVSGAYD 258 (445)
T ss_dssp ETTTTEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCCEE--EEEECCSSCEEEEEE--CSSCEEEEETT
T ss_pred ECCcCcEEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCcEE--EEEcCCcccEEEEEE--CCCEEEEEcCC
Confidence 999999999999999999999996 568999999999999999999887 678889999999999 78899999999
Q ss_pred -eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCC-EEEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeC
Q psy12614 177 -AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADF-TIITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSE 254 (708)
Q Consensus 177 -~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~ 254 (708)
.|++||+.+++.+..+.. +...+.+++| ++ .+++++.||.|++||+++++.+..+.+|...+.++.++
T Consensus 259 g~i~iwd~~~~~~~~~~~~-------~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~- 328 (445)
T 2ovr_B 259 FMVKVWDPETETCLHTLQG-------HTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELK- 328 (445)
T ss_dssp SCEEEEEGGGTEEEEEECC-------CSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEEE-
T ss_pred CEEEEEECCCCcEeEEecC-------CCCceEEEEE--CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEEEEe-
Confidence 999999999998888763 3788999999 45 59999999999999999999999999999999988874
Q ss_pred CCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEec---cccceEEEEEeCCEEEEEcCCCeEEEEeCCC
Q psy12614 255 DENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVI---HEGDVKSLALHGNRLYSGGLDSYLSLSYYPP 331 (708)
Q Consensus 255 ~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~---~~~~v~~l~~~~~~l~s~~~d~~i~iw~~~~ 331 (708)
++++++++.||.|++||+.+ ++ ....+.. |...|.+++++++++++++.||.|++||+.+
T Consensus 329 -~~~l~~~~~dg~i~vwd~~~--------~~--------~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg~v~iwd~~~ 391 (445)
T 2ovr_B 329 -DNILVSGNADSTVKIWDIKT--------GQ--------CLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKT 391 (445)
T ss_dssp -TTEEEEEETTSCEEEEETTT--------CC--------EEEEECSTTSCSSCEEEEEECSSEEEEEETTSEEEEEETTT
T ss_pred -CCEEEEEeCCCeEEEEECCC--------Cc--------EEEEEccCCCCCCCEEEEEECCCEEEEEeCCCeEEEEECCC
Confidence 56999999999999999988 65 5566665 8889999999999999999999999999876
Q ss_pred CceeecCccCCCCceEEEEcCCcEEEEEcCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEe
Q psy12614 332 KTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVV 411 (708)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 411 (708)
+...... .... ...+...|.+++|
T Consensus 392 ~~~~~~~-----------------------------~~~~---------------------------~~~~~~~v~~~~~ 415 (445)
T 2ovr_B 392 GEFIRNL-----------------------------VTLE---------------------------SGGSGGVVWRIRA 415 (445)
T ss_dssp CCEEEEE-----------------------------EECT---------------------------TGGGTCEEEEEEE
T ss_pred Cceeeee-----------------------------eccc---------------------------cCCCCceEEEEEe
Confidence 5311100 0000 0246688999999
Q ss_pred CCCCcEEEEEc-CCc----eEEEEEEe
Q psy12614 412 SNDGKYVAYST-ESC----VRLHSLDL 433 (708)
Q Consensus 412 s~~g~~l~~~~-d~~----i~i~~~~~ 433 (708)
+|++.+++++. ||+ +.+||+..
T Consensus 416 s~~~~~la~~~~dg~~~~~l~v~df~~ 442 (445)
T 2ovr_B 416 SNTKLVCAVGSRNGTEETKLLVLDFDV 442 (445)
T ss_dssp CSSEEEEEEECSSSSSCCEEEEEECCC
T ss_pred cCCEEEEEEcccCCCCccEEEEEECCC
Confidence 99999999865 887 99999875
|
| >2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-38 Score=314.60 Aligned_cols=296 Identities=15% Similarity=0.197 Sum_probs=231.2
Q ss_pred EEEecCCCCCcEEEEEEeCCEEEEEcCCCcEEEEECCCC--eEeEEE-ee-cCCceEEEEEecCCCEEEEEeCCCcEEEE
Q psy12614 63 RVFIGDPLSNSIECLTWFNDRLFSGGLQGFVNEYDMRRL--NIKSST-AV-TSGTCWCLSVHKKKRLLAAGTEQGHINLF 138 (708)
Q Consensus 63 ~~~~~h~~~~~v~~l~~~~~~l~s~~~d~~i~vwd~~~~--~~~~~~-~~-~~~~v~~~~~s~~~~~la~~~~d~~i~iw 138 (708)
..+.+|. .+|.+++|++++|++++.|++|++||+.++ +....+ .. |.+.|.+++|+|++++||+++.|+.|++|
T Consensus 8 ~~~~~h~--~~v~~~~~s~~~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw 85 (330)
T 2hes_X 8 KSLKLYK--EKIWSFDFSQGILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIW 85 (330)
T ss_dssp EEEECCS--SCEEEEEEETTEEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred eeeccCC--CceeeeccCCCEEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEE
Confidence 4889999 999999999669999999999999999875 455555 34 99999999999999999999999999999
Q ss_pred EccCCc-----EEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCC-C---ceEEEEEecccCCCCCceeEEE
Q psy12614 139 QISDEG-----LLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHK-G---HAIHKMSLDKSSKFSKNTAVWC 208 (708)
Q Consensus 139 d~~~~~-----~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~-~---~~~~~~~~~~~~~~~~~~~v~~ 208 (708)
|+.... ......+.+|...|.+++|+|++++|++++.| .|++||+.. + +.+..+. .|...|.+
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~-------~h~~~v~~ 158 (330)
T 2hes_X 86 AKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQ-------EHSQDVKH 158 (330)
T ss_dssp EC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEEC-------CCSSCEEE
T ss_pred EcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEec-------cCCCceEE
Confidence 985321 12236788999999999999999999999999 999999953 2 2333333 44889999
Q ss_pred EEEccCCE-EEEEcCCCcEEEEeCCCC--eeEEEeeccccCeEEEEEeCC--CCEEEEEecCCeEEEEEccCCcccccCC
Q psy12614 209 VAFCADFT-IITGDSGGFVRFWDGKTG--VQWSDVKTHKKDILALTVSED--ENYLYCAGVDPTVVCFQRTRKPQVCSTS 283 (708)
Q Consensus 209 ~~~~~~~~-l~~~~~dg~i~~wd~~~~--~~~~~~~~~~~~i~~~~~s~~--~~~l~~~~~dg~i~iw~~~~~~~~~~~~ 283 (708)
++|+|++. +++++.|+.|++||..++ +++..+.+|...|.+++|+|+ +.+|++++.|+.|++|++..
T Consensus 159 v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~-------- 230 (330)
T 2hes_X 159 VIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMG-------- 230 (330)
T ss_dssp EEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEE--------
T ss_pred EEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecC--------
Confidence 99999995 999999999999998776 678889999999999999998 67999999999999999976
Q ss_pred CCCCCCcceEEeEEEec-cccceEEEEEe-CCEEEEEcCCCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEEEcC
Q psy12614 284 GPEQGSSVWVRSVNRVI-HEGDVKSLALH-GNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYT 361 (708)
Q Consensus 284 g~~~~~~~~~~~~~~~~-~~~~v~~l~~~-~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~ 361 (708)
+.......|.....+.. |...|.+++|+ +..|++++.|+.|++|+..++...
T Consensus 231 ~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~l~s~~~dg~v~iw~~~~~~~~-------------------------- 284 (330)
T 2hes_X 231 DDEDDQQEWVCEAILPDVHKRQVYNVAWGFNGLIASVGADGVLAVYEEVDGEWK-------------------------- 284 (330)
T ss_dssp ECTTSCEEEEEEEECCSCCSSCEEEEEECTTSCEEEEETTSCEEEEEEETTEEE--------------------------
T ss_pred CCccccceeEEeeecccccccceEEEEEcCCCEEEEEeCCCEEEEEEcCCCceE--------------------------
Confidence 32212233444455554 88999999999 778999999999999987432100
Q ss_pred CeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCC-ceEEEEeCC--CCcEEEEE-cCCceEEEEEEe
Q psy12614 362 SHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNA-TIRCSVVSN--DGKYVAYS-TESCVRLHSLDL 433 (708)
Q Consensus 362 ~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~s~--~g~~l~~~-~d~~i~i~~~~~ 433 (708)
.+......|.. .|.+++|+| ++++|+++ .|++|++|++..
T Consensus 285 --------------------------------~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 285 --------------------------------VFAKRALCHGVYEINVVKWLELNGKTILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp --------------------------------EEEEESCTTTTSCEEEEEEC-----CCEEEEETTSEEEEEEC--
T ss_pred --------------------------------EEeccccccccceEEEEEEecCCCceEEEEecCCCcEEEEEecc
Confidence 11111224555 799999999 78889884 599999999864
|
| >2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-38 Score=315.63 Aligned_cols=282 Identities=15% Similarity=0.232 Sum_probs=239.5
Q ss_pred EEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEc
Q psy12614 63 RVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQI 140 (708)
Q Consensus 63 ~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~ 140 (708)
..+.+|. ..|.+++|+ +.+|++++.||+|++||..+++....+..|...|.+++|+|++.+||+++.|+.+++|++
T Consensus 58 ~~l~gH~--~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~ 135 (354)
T 2pbi_B 58 RTLKGHG--NKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPL 135 (354)
T ss_dssp EEEECCS--SCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEEC
T ss_pred EEecCCC--CeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEE
Confidence 4899999 999999999 899999999999999999999999999999999999999999999999999999999998
Q ss_pred cCCcE----EEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccC-
Q psy12614 141 SDEGL----LYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCAD- 214 (708)
Q Consensus 141 ~~~~~----~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~- 214 (708)
..... .....+..|.+.|.+++|+|++..|++++.| +|++||+++++.+..+. +|...|.+++|+|+
T Consensus 136 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~-------~h~~~v~~~~~~~~~ 208 (354)
T 2pbi_B 136 TFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFH-------GHGADVLCLDLAPSE 208 (354)
T ss_dssp CCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEE-------CCSSCEEEEEECCCS
T ss_pred eccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEc-------CCCCCeEEEEEEeCC
Confidence 64310 1114566799999999999999999999999 99999999999988876 33788999999874
Q ss_pred -C-EEEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcce
Q psy12614 215 -F-TIITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVW 292 (708)
Q Consensus 215 -~-~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~ 292 (708)
+ .+++|+.||.|++||+++++++..+.+|...|.+++|+|++++|++++.|+.|++||+.. ++
T Consensus 209 ~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~--------~~------- 273 (354)
T 2pbi_B 209 TGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRA--------DR------- 273 (354)
T ss_dssp SCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT--------TE-------
T ss_pred CCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCC--------Cc-------
Confidence 4 599999999999999999999999999999999999999999999999999999999987 43
Q ss_pred EEeEEEec--cccceEEEEEe--CCEEEEEcCCCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEEEcCCeEEEEE
Q psy12614 293 VRSVNRVI--HEGDVKSLALH--GNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWS 368 (708)
Q Consensus 293 ~~~~~~~~--~~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~ 368 (708)
....+.. +...+.+++|+ +.+|++++.|+.|++||+.+..
T Consensus 274 -~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~----------------------------------- 317 (354)
T 2pbi_B 274 -EVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGS----------------------------------- 317 (354)
T ss_dssp -EEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCS-----------------------------------
T ss_pred -EEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCc-----------------------------------
Confidence 2222222 22356677777 6777777777777777764321
Q ss_pred ecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEEEc-CCceEEEE
Q psy12614 369 LGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYST-ESCVRLHS 430 (708)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~-d~~i~i~~ 430 (708)
......+|...|.+++|+|+|++|+++. |++|++|+
T Consensus 318 --------------------------~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 318 --------------------------RVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp --------------------------EEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred --------------------------eEEEEECCCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 2233347889999999999999999855 99999995
|
| >3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-39 Score=331.24 Aligned_cols=320 Identities=13% Similarity=0.136 Sum_probs=267.5
Q ss_pred CcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECCCCeEe
Q psy12614 27 KVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMRRLNIK 104 (708)
Q Consensus 27 ~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~~~~ 104 (708)
..+++++|+|++++|++|+.||.|++||+.+++... .+.+|. .+....|+ +++|++++.||.|++||+.+++..
T Consensus 57 ~~~~~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~-~~~~~~---~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~ 132 (420)
T 3vl1_A 57 DAGKGNTFEKVGSHLYKARLDGHDFLFNTIIRDGSK-MLKRAD---YTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQR 132 (420)
T ss_dssp BCCTTCEEEEEETTEEEEEETTEEEEEECCSEETTT-TSCSCC---EEEEEEECSSSCEEEEEETTSCEEEECTTSCEEE
T ss_pred ccccceeeeecCCeEEEEEcCCcEEEEEecccceee-EEecCC---ceEEEEEecCCCEEEEEECCCCEEEEeCCCccee
Confidence 335589999999999999999999999998865543 344332 33444556 899999999999999999999999
Q ss_pred EEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEc
Q psy12614 105 SSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDI 183 (708)
Q Consensus 105 ~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~ 183 (708)
..+.+|.+.|.+++|+|++++|++++.|+.|++||+.+++.. ..+.+|...|.+++|+|++++|++++.| .|++||+
T Consensus 133 ~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~--~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~ 210 (420)
T 3vl1_A 133 EIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNP--RTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWEC 210 (420)
T ss_dssp EETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCC--EEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEET
T ss_pred eecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCc--eEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeEC
Confidence 888999999999999999999999999999999999998876 6788999999999999999999999999 9999999
Q ss_pred CCCceEEEEEecccCCCCCceeEEEEE---------------------EccCCE-EEEEcCCCcEEEEeCCCCeeEEEee
Q psy12614 184 HKGHAIHKMSLDKSSKFSKNTAVWCVA---------------------FCADFT-IITGDSGGFVRFWDGKTGVQWSDVK 241 (708)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~v~~~~---------------------~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~~ 241 (708)
.+++.+..+.... .+...+.+++ |+|+++ +++++.||.|++||+++++.+..+.
T Consensus 211 ~~~~~~~~~~~~~----~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 286 (420)
T 3vl1_A 211 GTGTTIHTFNRKE----NPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLP 286 (420)
T ss_dssp TTTEEEEEECBTT----BTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEEC
T ss_pred CCCceeEEeecCC----CCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcc
Confidence 9999988886542 2244455554 568885 8899999999999999998777664
Q ss_pred -ccccCeEEEEEeCCCC-EEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEec-cccceEEEEEe-CCEEEE
Q psy12614 242 -THKKDILALTVSEDEN-YLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVI-HEGDVKSLALH-GNRLYS 317 (708)
Q Consensus 242 -~~~~~i~~~~~s~~~~-~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~v~~l~~~-~~~l~s 317 (708)
.|...|.+++|+|+++ +|++++.||.|++||+.+ ++ . ....+.. |...|.++.+. +.+|++
T Consensus 287 ~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~--------~~----~---~~~~~~~~~~~~v~~~~~~~~~~l~s 351 (420)
T 3vl1_A 287 SKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRS--------PE----C---PVGEFLINEGTPINNVYFAAGALFVS 351 (420)
T ss_dssp CTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTC--------TT----S---CSEEEEESTTSCEEEEEEETTEEEEE
T ss_pred cccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCC--------Cc----C---chhhhhccCCCCceEEEeCCCCEEEE
Confidence 5788999999999998 999999999999999988 53 0 1344444 67789999888 889999
Q ss_pred EcCCCeEEEEeCCCCc----------eeecCccCCCCceEEEEcCCc----EEEEEcCCeEEEEEecC
Q psy12614 318 GGLDSYLSLSYYPPKT----------LVKYPCTLAQSTPVSLAKDIQ----HVLLQYTSHLELWSLGS 371 (708)
Q Consensus 318 ~~~d~~i~iw~~~~~~----------~~~~~~~~~~~~~~~~s~~~~----~l~~~~~~~i~i~~~~~ 371 (708)
++.|+.|++|++.... ...+..+......++|+|+++ +++++.++.+.+|++++
T Consensus 352 ~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~g~l~a~g~~g~~~~~~~~~ 419 (420)
T 3vl1_A 352 SGFDTSIKLDIISDPESERPAIEFETPTFLVSNDDAVSQFCYVSDDESNGEVLEVGKNNFCALYNLSN 419 (420)
T ss_dssp ETTTEEEEEEEECCTTCCSCEECTTSCEEECCSSCCCCEEEEECCSSSSCEEEEEETTTEEEEEESCC
T ss_pred ecCCccEEEEeccCCCCCccceeccCccEEccCCcceEEEEEccCCCCcceEEEEcCCceEEEEeccC
Confidence 9999999999987632 222233455678899999998 77778999999999875
|
| >1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-38 Score=329.01 Aligned_cols=343 Identities=16% Similarity=0.194 Sum_probs=271.9
Q ss_pred CcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CC-EEEEEcCCCcEEEEEC----CCCe------EeEEEee-----
Q psy12614 48 QSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--ND-RLFSGGLQGFVNEYDM----RRLN------IKSSTAV----- 109 (708)
Q Consensus 48 g~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~-~l~s~~~d~~i~vwd~----~~~~------~~~~~~~----- 109 (708)
..+.+|++....... ....|. ..|.+++|+ ++ +|++++.||.|++||+ .+++ ....+..
T Consensus 25 ~~~~~~~~~~~~~~~-~~~~~~--~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (425)
T 1r5m_A 25 SIDSSDDLDGFVKIL-KEIVKL--DNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALS 101 (425)
T ss_dssp ---------CCCEEC-EEEEEC--SCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC
T ss_pred cccccccchhhhhhe-eeeecc--CceEEEEECCCCCcEEEEecCCceEEEEEEecccCCcccccccccccccccccccc
Confidence 346678887655443 445566 899999999 77 9999999999999999 8888 4555554
Q ss_pred -----cCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEc
Q psy12614 110 -----TSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDI 183 (708)
Q Consensus 110 -----~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~ 183 (708)
|.+.|.+++|+|++++|++++.||.|++|| .+++.. ..+..|...|.+++|+|++++|++++.| .|++||+
T Consensus 102 ~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~-~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~ 178 (425)
T 1r5m_A 102 ASSGKTTNQVTCLAWSHDGNSIVTGVENGELRLWN-KTGALL--NVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNV 178 (425)
T ss_dssp ------CBCEEEEEECTTSSEEEEEETTSCEEEEE-TTSCEE--EEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEET
T ss_pred ccccCCCCceEEEEEcCCCCEEEEEeCCCeEEEEe-CCCCee--eeccCCCccEEEEEECCCCCEEEEEecCCeEEEEEC
Confidence 677999999999999999999999999999 555555 6788899999999999999999999999 9999999
Q ss_pred CCCceEEEEEecccCCCCCcee---------------EEEEEEccCCEEEEEcCCCcEEEEeCCCCeeEEEeeccccCeE
Q psy12614 184 HKGHAIHKMSLDKSSKFSKNTA---------------VWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVKTHKKDIL 248 (708)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~---------------v~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~ 248 (708)
.+++.+..+... ... +.+++|+|++.+++++.+|.|++||+.+++.+..+..|...|.
T Consensus 179 ~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~ 251 (425)
T 1r5m_A 179 ISGTVMQHFELK-------ETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPIS 251 (425)
T ss_dssp TTTEEEEEECCC----------------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEE
T ss_pred CCCcEEEEeecc-------ccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceE
Confidence 999988887654 333 8899999999999999999999999999999999999999999
Q ss_pred EEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe-CCEEEEEcCCCeEEEE
Q psy12614 249 ALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH-GNRLYSGGLDSYLSLS 327 (708)
Q Consensus 249 ~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~-~~~l~s~~~d~~i~iw 327 (708)
+++|+|++++|++++.|+.|++||+.+ ++ ....+..|...|.+++|+ ...+++++.|+.|++|
T Consensus 252 ~~~~~~~~~~l~~~~~d~~i~i~d~~~--------~~--------~~~~~~~~~~~i~~~~~~~~~~l~~~~~d~~i~i~ 315 (425)
T 1r5m_A 252 VLEFNDTNKLLLSASDDGTLRIWHGGN--------GN--------SQNCFYGHSQSIVSASWVGDDKVISCSMDGSVRLW 315 (425)
T ss_dssp EEEEETTTTEEEEEETTSCEEEECSSS--------BS--------CSEEECCCSSCEEEEEEETTTEEEEEETTSEEEEE
T ss_pred EEEECCCCCEEEEEcCCCEEEEEECCC--------Cc--------cceEecCCCccEEEEEECCCCEEEEEeCCCcEEEE
Confidence 999999999999999999999999988 54 456667899999999999 3499999999999999
Q ss_pred eCCCCceeecCccCCCCceEEEEcCCcEEEEEcCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceE
Q psy12614 328 YYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIR 407 (708)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 407 (708)
|+.+.. .......+...|.
T Consensus 316 d~~~~~-------------------------------------------------------------~~~~~~~~~~~i~ 334 (425)
T 1r5m_A 316 SLKQNT-------------------------------------------------------------LLALSIVDGVPIF 334 (425)
T ss_dssp ETTTTE-------------------------------------------------------------EEEEEECTTCCEE
T ss_pred ECCCCc-------------------------------------------------------------EeEecccCCccEE
Confidence 885432 2233335678899
Q ss_pred EEEeCCCCcEEEEEc-CCceEEEEEEecCCcc--------------eeEEeecCCcccccceeEEEEEecCCCeEEEEec
Q psy12614 408 CSVVSNDGKYVAYST-ESCVRLHSLDLDGDKP--------------QISRIKNLPAPLFKSIFTHVLISADSTLLLAVSL 472 (708)
Q Consensus 408 ~~~~s~~g~~l~~~~-d~~i~i~~~~~~~~~~--------------~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~~~~~ 472 (708)
+++|+|++++|+++. |+.|++|++....... ....+..+..|.....|++++|+|++++|++++.
T Consensus 335 ~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~ 414 (425)
T 1r5m_A 335 AGRISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYS 414 (425)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEES
T ss_pred EEEEcCCCCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEec
Confidence 999999999999855 9999999998633000 0001222455421117888999999999999999
Q ss_pred CCc--EEEec
Q psy12614 473 NGP--LYIID 480 (708)
Q Consensus 473 dg~--i~~~~ 480 (708)
||. +|+++
T Consensus 415 dg~i~iw~~~ 424 (425)
T 1r5m_A 415 LQEGSVVAIP 424 (425)
T ss_dssp SSCCEEEECC
T ss_pred CceEEEEeec
Confidence 998 88764
|
| >3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-37 Score=306.56 Aligned_cols=288 Identities=14% Similarity=0.223 Sum_probs=245.8
Q ss_pred eEeEEEeecCCceEEEEEecCC-CEEEEEeCCCcEEEEEccCCcE---EEEEecccccccEEEEEECCCCCEEEEecCC-
Q psy12614 102 NIKSSTAVTSGTCWCLSVHKKK-RLLAAGTEQGHINLFQISDEGL---LYEKLLDRQQGRILCTAWHSSGDYLVTGCAA- 176 (708)
Q Consensus 102 ~~~~~~~~~~~~v~~~~~s~~~-~~la~~~~d~~i~iwd~~~~~~---~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d- 176 (708)
.+..++.+|.+.|++++|+|++ ++|++|+.|++|++|++..... .....+.+|...|.+++|+|++++|++++.|
T Consensus 8 ~l~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~ 87 (319)
T 3frx_A 8 VLRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDK 87 (319)
T ss_dssp EEEEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTS
T ss_pred EEEEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCC
Confidence 4566788999999999999965 7999999999999999875321 2236788999999999999999999999999
Q ss_pred eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCC
Q psy12614 177 AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSED 255 (708)
Q Consensus 177 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~ 255 (708)
+|++||+.+++.+..+. +|...|.+++|+|++. +++++.|+.|++||++ ++.+..+.+|...|.+++++|.
T Consensus 88 ~v~~wd~~~~~~~~~~~-------~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~-~~~~~~~~~h~~~v~~~~~~~~ 159 (319)
T 3frx_A 88 TLRLWDVATGETYQRFV-------GHKSDVMSVDIDKKASMIISGSRDKTIKVWTIK-GQCLATLLGHNDWVSQVRVVPN 159 (319)
T ss_dssp EEEEEETTTTEEEEEEE-------CCSSCEEEEEECTTSCEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEECCC
T ss_pred EEEEEECCCCCeeEEEc-------cCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC-CCeEEEEeccCCcEEEEEEccC
Confidence 99999999999888876 3488999999999995 9999999999999986 6677888899999999999985
Q ss_pred ------CCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEEEcCCCeEEEE
Q psy12614 256 ------ENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSGGLDSYLSLS 327 (708)
Q Consensus 256 ------~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~~~d~~i~iw 327 (708)
+..+++++.|+.|++||+.+ ++ ....+.+|...|.+++|+ +.+|++++.|+.|++|
T Consensus 160 ~~~~~~~~~l~s~~~d~~i~~wd~~~--------~~--------~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iw 223 (319)
T 3frx_A 160 EKADDDSVTIISAGNDKMVKAWNLNQ--------FQ--------IEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLW 223 (319)
T ss_dssp ------CCEEEEEETTSCEEEEETTT--------TE--------EEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEE
T ss_pred CCCCCCccEEEEEeCCCEEEEEECCc--------ch--------hheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEE
Confidence 45899999999999999988 54 566788999999999999 8899999999999999
Q ss_pred eCCCCceeecCccCCCCceEEEEcCCcEEEEEcCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEE-------e
Q psy12614 328 YYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMS-------A 400 (708)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~ 400 (708)
|+.+...............++|+|++.+++++.+..+++|++.... .+.... .
T Consensus 224 d~~~~~~~~~~~~~~~v~~~~~sp~~~~la~~~~~~i~v~~~~~~~--------------------~~~~~~~~~~~~~~ 283 (319)
T 3frx_A 224 NLAAKKAMYTLSAQDEVFSLAFSPNRYWLAAATATGIKVFSLDPQY--------------------LVDDLRPEFAGYSK 283 (319)
T ss_dssp ETTTTEEEEEEECCSCEEEEEECSSSSEEEEEETTEEEEEEETTEE--------------------EEEEECCCCTTCCG
T ss_pred ECCCCcEEEEecCCCcEEEEEEcCCCCEEEEEcCCCcEEEEeCcCe--------------------eeeccCcccccccc
Confidence 9998774333324456788999999999999988999999998643 111111 1
Q ss_pred cCCCceEEEEeCCCCcEEEEEc-CCceEEEEEEe
Q psy12614 401 VNNATIRCSVVSNDGKYVAYST-ESCVRLHSLDL 433 (708)
Q Consensus 401 ~~~~~i~~~~~s~~g~~l~~~~-d~~i~i~~~~~ 433 (708)
.+...+.+++|+|||++|++|. |+.|++|++.+
T Consensus 284 ~~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd~~t 317 (319)
T 3frx_A 284 AAEPHAVSLAWSADGQTLFAGYTDNVIRVWQVMT 317 (319)
T ss_dssp GGCCCEEEEEECTTSSEEEEEETTSCEEEEEEEE
T ss_pred CcCcceeEEEECCCCCEEEEeecCceEEEEEEee
Confidence 2456789999999999999855 99999999986
|
| >4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-37 Score=305.99 Aligned_cols=286 Identities=15% Similarity=0.303 Sum_probs=247.7
Q ss_pred CeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEE
Q psy12614 59 PHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHIN 136 (708)
Q Consensus 59 ~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~ 136 (708)
..+...+.+|. ..|.+++|+ +++|++++.||.|++|++.+++....+.+|...|.+++|+|++++|++++.|+.|+
T Consensus 13 ~~~~~~~~gh~--~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~ 90 (312)
T 4ery_A 13 YALKFTLAGHT--KAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLK 90 (312)
T ss_dssp CEEEEEECCCS--SCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred ceeEEEEcccC--CcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEE
Confidence 34556889999 999999999 89999999999999999999999999999999999999999999999999999999
Q ss_pred EEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCC
Q psy12614 137 LFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADF 215 (708)
Q Consensus 137 iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 215 (708)
+||+.+++.. ..+.+|...|.+++|+|++++|++++.| .|++||+++++.+..+.. +...|.+++|+|++
T Consensus 91 vwd~~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~-------~~~~v~~~~~~~~~ 161 (312)
T 4ery_A 91 IWDVSSGKCL--KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPA-------HSDPVSAVHFNRDG 161 (312)
T ss_dssp EEETTTCCEE--EEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECC-------CSSCEEEEEECTTS
T ss_pred EEECCCCcEE--EEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecC-------CCCcEEEEEEcCCC
Confidence 9999999887 6788999999999999999999999999 999999999998887753 37889999999999
Q ss_pred E-EEEEcCCCcEEEEeCCCCeeEEEee-ccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceE
Q psy12614 216 T-IITGDSGGFVRFWDGKTGVQWSDVK-THKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWV 293 (708)
Q Consensus 216 ~-l~~~~~dg~i~~wd~~~~~~~~~~~-~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~ 293 (708)
. +++++.||.|++||+++++.+..+. .+...+..++|+|++++|++++.|+.|++||+.+ ++
T Consensus 162 ~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~--------~~-------- 225 (312)
T 4ery_A 162 SLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSK--------GK-------- 225 (312)
T ss_dssp SEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTT--------TE--------
T ss_pred CEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCC--------Cc--------
Confidence 5 8999999999999999998877654 4667899999999999999999999999999998 64
Q ss_pred EeEEEeccccceEEE--EEe---CCEEEEEcCCCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEEEcCCeEEEEE
Q psy12614 294 RSVNRVIHEGDVKSL--ALH---GNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWS 368 (708)
Q Consensus 294 ~~~~~~~~~~~v~~l--~~~---~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~ 368 (708)
....+.+|...+..+ .+. +.+|++++.|+.|++||+.+..
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~----------------------------------- 270 (312)
T 4ery_A 226 CLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKE----------------------------------- 270 (312)
T ss_dssp EEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCC-----------------------------------
T ss_pred EEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCch-----------------------------------
Confidence 556666776554332 222 6788888888888888875432
Q ss_pred ecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEEE---cCCceEEEEEE
Q psy12614 369 LGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYS---TESCVRLHSLD 432 (708)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~---~d~~i~i~~~~ 432 (708)
+.....+|...|.+++|+|++.+++++ .|++|++|+.+
T Consensus 271 --------------------------~~~~~~~h~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 271 --------------------------IVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKSD 311 (312)
T ss_dssp --------------------------EEEEECCCSSCEEEEEECSSSSEEEEEECTTTCCEEEEECC
T ss_pred --------------------------hhhhhhccCCcEEEEeecCcCCceEEEEccCCccEEEecCC
Confidence 333445788899999999999999985 39999999864
|
| >3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-39 Score=325.01 Aligned_cols=304 Identities=15% Similarity=0.236 Sum_probs=245.5
Q ss_pred cEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEE
Q psy12614 49 SIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLL 126 (708)
Q Consensus 49 ~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l 126 (708)
.+..|+..+..... .+.+|. +.|.+++|+ +++|++|+.|++|++||+.+++....+..|...|.+++|+|++++|
T Consensus 47 ~~~~~~~~~~~~~~-~l~gH~--~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~l 123 (380)
T 3iz6_a 47 TAVSFNPTDLVCCR-TLQGHS--GKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSV 123 (380)
T ss_dssp GCCCCCCCCCEEEE-EECCCS--SCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEE
T ss_pred cccccccceeEEee-cccccc--cEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEE
Confidence 45567766655554 899999 999999999 8999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCcEEEEEccCCc-----EEEEEecccccccEEEEEECCCC-CEEEEecCC-eEEEEEcCCCceEEEEEecccCC
Q psy12614 127 AAGTEQGHINLFQISDEG-----LLYEKLLDRQQGRILCTAWHSSG-DYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSK 199 (708)
Q Consensus 127 a~~~~d~~i~iwd~~~~~-----~~~~~~~~~~~~~v~~~~~s~d~-~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~ 199 (708)
|+|+.|+.+++||+.+.. ......+.+|.+.|.++.|+|++ ..|++++.| +|++||+.+++.+..+..... .
T Consensus 124 as~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~-~ 202 (380)
T 3iz6_a 124 ACGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFP-S 202 (380)
T ss_dssp EECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSS-S
T ss_pred EEeeCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccC-C
Confidence 999999999999987532 11124678999999999999974 579999999 999999999998877643210 0
Q ss_pred CCCceeEEEEEEcc-CC-EEEEEcCCCcEEEEeCC-CCeeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCC
Q psy12614 200 FSKNTAVWCVAFCA-DF-TIITGDSGGFVRFWDGK-TGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRK 276 (708)
Q Consensus 200 ~~~~~~v~~~~~~~-~~-~l~~~~~dg~i~~wd~~-~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~ 276 (708)
+|...|.+++|++ ++ .+++|+.||.|++||++ .++.+..+.+|...|.+++|+|++++|++++.||.|++||+.+
T Consensus 203 -~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~- 280 (380)
T 3iz6_a 203 -GHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRT- 280 (380)
T ss_dssp -SCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTT-
T ss_pred -CCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCC-
Confidence 4488899999987 55 48999999999999998 4577888999999999999999999999999999999999998
Q ss_pred cccccCCCCCCCCcceEEeEEEeccc-------cceEEEEEe--CCEEEEEcCCCeEEEEeCCCCceeecCccCCCCceE
Q psy12614 277 PQVCSTSGPEQGSSVWVRSVNRVIHE-------GDVKSLALH--GNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPV 347 (708)
Q Consensus 277 ~~~~~~~g~~~~~~~~~~~~~~~~~~-------~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~ 347 (708)
++ ....+..+. ..|.+++|+ +.+|++|+.||.|++||+...
T Consensus 281 -------~~--------~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~--------------- 330 (380)
T 3iz6_a 281 -------GH--------QLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLA--------------- 330 (380)
T ss_dssp -------TE--------EEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTC---------------
T ss_pred -------Cc--------EEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCC---------------
Confidence 54 333333221 235566665 566666666666666665332
Q ss_pred EEEcCCcEEEEEcCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEE---EecCCCceEEEEeCCCCcEEEEEc-C
Q psy12614 348 SLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKM---SAVNNATIRCSVVSNDGKYVAYST-E 423 (708)
Q Consensus 348 ~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~~~s~~g~~l~~~~-d 423 (708)
+ .+..+ ..+|...|.+++|+|+|++|++|. |
T Consensus 331 -------------------------~--------------------~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D 365 (380)
T 3iz6_a 331 -------------------------E--------------------MVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWD 365 (380)
T ss_dssp -------------------------C--------------------EEEEECCSCSSCCCCCCEEEECSSSSEEEEECTT
T ss_pred -------------------------c--------------------eEEEEecccCCCCCceEEEEECCCCCEEEEeeCC
Confidence 2 11111 136788999999999999999966 9
Q ss_pred CceEEEEEEe
Q psy12614 424 SCVRLHSLDL 433 (708)
Q Consensus 424 ~~i~i~~~~~ 433 (708)
++|++|++..
T Consensus 366 ~~i~iW~~~~ 375 (380)
T 3iz6_a 366 KNLKIWAFSG 375 (380)
T ss_dssp SCEEEEECCS
T ss_pred CCEEEEecCC
Confidence 9999999875
|
| >2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-38 Score=312.51 Aligned_cols=297 Identities=11% Similarity=0.141 Sum_probs=233.9
Q ss_pred EEEecCCCCCcEEEEEE-----e---CCEEEEEcCCCcEEEEECCC-------CeEeEEEeecCCceEEEEEecCCCEEE
Q psy12614 63 RVFIGDPLSNSIECLTW-----F---NDRLFSGGLQGFVNEYDMRR-------LNIKSSTAVTSGTCWCLSVHKKKRLLA 127 (708)
Q Consensus 63 ~~~~~h~~~~~v~~l~~-----~---~~~l~s~~~d~~i~vwd~~~-------~~~~~~~~~~~~~v~~~~~s~~~~~la 127 (708)
..+.+|. ..|++++| + +++|++|+.|++|++||+.+ +.+...+.+|...|.+++|+|++.+|+
T Consensus 15 ~~l~gH~--~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~ 92 (343)
T 2xzm_R 15 GILEGHS--DWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAI 92 (343)
T ss_dssp EEEECCS--SCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEE
T ss_pred eeeccch--hhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEE
Confidence 4899999 99999999 3 78999999999999999875 346778889999999999999999999
Q ss_pred EEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeE
Q psy12614 128 AGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAV 206 (708)
Q Consensus 128 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v 206 (708)
+++.|+.|++||+.+++.. ..+.+|...|.+++|+|++++|++++.| .|++||+.. ......... . .+...+
T Consensus 93 s~s~D~~v~lwd~~~~~~~--~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~-~~~~~~~~~-~---~~~~~v 165 (343)
T 2xzm_R 93 SSSWDKTLRLWDLRTGTTY--KRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILG-ECKFSSAEK-E---NHSDWV 165 (343)
T ss_dssp EEETTSEEEEEETTSSCEE--EEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSS-CEEEECCTT-T---SCSSCE
T ss_pred EEcCCCcEEEEECCCCcEE--EEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccC-Cceeeeecc-c---CCCcee
Confidence 9999999999999999887 6788999999999999999999999999 999999973 333222211 1 347889
Q ss_pred EEEEEccCC-----------EEEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccC
Q psy12614 207 WCVAFCADF-----------TIITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTR 275 (708)
Q Consensus 207 ~~~~~~~~~-----------~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~ 275 (708)
.+++|+|++ .+++++.||.|++|| ..++....+.+|...|.+++|+|++++|++++.||.|++||+..
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd-~~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~ 244 (343)
T 2xzm_R 166 SCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWN-TNFQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDILN 244 (343)
T ss_dssp EEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEE-TTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSC
T ss_pred eeeeeccccccccccCCCCCEEEEEcCCCEEEEEc-CCCceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECCC
Confidence 999999985 489999999999999 45777788899999999999999999999999999999999954
Q ss_pred CcccccCCCCCCCCcceEEeEEEeccccceEEEEEe-CCEEEEEcCCCeEEEEeCCCCceeecCccCCCCceEEEEcCCc
Q psy12614 276 KPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH-GNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQ 354 (708)
Q Consensus 276 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~-~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~ 354 (708)
.. . ... ...+...|.+++|+ ...+++++.|+.+++|++.+.......
T Consensus 245 --------~~----~---~~~-~~~~~~~v~~v~~sp~~~~la~~~d~~v~iw~~~~~~~~~~~---------------- 292 (343)
T 2xzm_R 245 --------LT----Y---PQR-EFDAGSTINQIAFNPKLQWVAVGTDQGVKIFNLMTQSKAPVC---------------- 292 (343)
T ss_dssp --------CS----S---CSE-EEECSSCEEEEEECSSSCEEEEEESSCEEEEESSSCCSCSEE----------------
T ss_pred --------Cc----c---cce-eecCCCcEEEEEECCCCCEEEEECCCCEEEEEeCCCCCCceE----------------
Confidence 21 0 111 12345668888888 333445566778888887654311100
Q ss_pred EEEEEcCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEEEc-CCceEEEEEEe
Q psy12614 355 HVLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYST-ESCVRLHSLDL 433 (708)
Q Consensus 355 ~l~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~-d~~i~i~~~~~ 433 (708)
.+.... ........+|...+.+++|+|+|++|++|. ||.|++|++++
T Consensus 293 -------------~~~~~~-------------------~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~~Dg~v~~w~~~~ 340 (343)
T 2xzm_R 293 -------------TIEAEP-------------------ITKAEGQKGKNPQCTSLAWNALGKKLFAGFTDGVIRTFSFET 340 (343)
T ss_dssp -------------ECCCCS-------------------GGGBTTBCCSCCCEEEEEECSSSCCEEEEETTSEEEEEEEEE
T ss_pred -------------EeecCc-------------------chhhhhhcCCCCceEEEEECCCCCeEEEecCCceEEEEEEEc
Confidence 000000 000000124667899999999999999855 99999999986
|
| >3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-37 Score=319.92 Aligned_cols=333 Identities=15% Similarity=0.189 Sum_probs=276.4
Q ss_pred EeCCCCCeEEEEEecCCCCCc-EEEEEEeCCEEEEEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeC
Q psy12614 53 WDISETPHVDRVFIGDPLSNS-IECLTWFNDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTE 131 (708)
Q Consensus 53 wd~~~~~~~~~~~~~h~~~~~-v~~l~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~ 131 (708)
|...........+.+|. .. +.++.+++++|++|+.||+|++||+.+++.+..+.+|.+.|++++|+|++ +|++|+.
T Consensus 105 w~~~~~~~~~~~l~~h~--~~v~~~~~~~~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~ 181 (464)
T 3v7d_B 105 WYNPKFVPQRTTLRGHM--TSVITCLQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVSGST 181 (464)
T ss_dssp HHCTTCCCEEEEEECCS--SSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTT-EEEEEET
T ss_pred hcCCCcCcceEEEcCCC--CCcEEEEEECCCEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCC-EEEEEeC
Confidence 43333333445899998 55 68888889999999999999999999999999999999999999999988 9999999
Q ss_pred CCcEEEEEccCCcEEEEEecccccccEEEEEEC--CCCCEEEEecCC-eEEEEEcCCCceEEEEEec-------------
Q psy12614 132 QGHINLFQISDEGLLYEKLLDRQQGRILCTAWH--SSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLD------------- 195 (708)
Q Consensus 132 d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s--~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~------------- 195 (708)
||.|++||+.+++.. ..+.+|...|.+++|+ +++++|++++.| .|++||+.++.........
T Consensus 182 dg~i~vwd~~~~~~~--~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (464)
T 3v7d_B 182 DRTVRVWDIKKGCCT--HVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEEN 259 (464)
T ss_dssp TSCEEEEETTTTEEE--EEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGC
T ss_pred CCCEEEEECCCCcEE--EEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCC
Confidence 999999999999877 7788999999999998 688999999999 9999999887644321100
Q ss_pred ------ccCCCCCceeEEEEEEccCC-EEEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEecCCeE
Q psy12614 196 ------KSSKFSKNTAVWCVAFCADF-TIITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTV 268 (708)
Q Consensus 196 ------~~~~~~~~~~v~~~~~~~~~-~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i 268 (708)
.. ++...+.++ ++++ .+++++.||.|++||+.+++.+..+.+|...|.+++|+|+++++++++.||.|
T Consensus 260 ~~~~~~~~---~~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i 334 (464)
T 3v7d_B 260 PYFVGVLR---GHMASVRTV--SGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTI 334 (464)
T ss_dssp TTEEEEEC---CCSSCEEEE--EEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCE
T ss_pred eEEEEEcc---CccceEEEE--cCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcE
Confidence 01 336677776 4555 59999999999999999999999999999999999999999999999999999
Q ss_pred EEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEeCCEEEEEcCCCeEEEEeCCCCceeecCccCCCCceEE
Q psy12614 269 VCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALHGNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVS 348 (708)
Q Consensus 269 ~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~ 348 (708)
++||+.+ ++ ....+.+|...|.++++++.++++++.||.|++||+.+...............++
T Consensus 335 ~vwd~~~--------~~--------~~~~~~~h~~~v~~~~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~ 398 (464)
T 3v7d_B 335 RIWDLEN--------GE--------LMYTLQGHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITT 398 (464)
T ss_dssp EEEETTT--------TE--------EEEEECCCSSCEEEEEECSSEEEEEETTSEEEEEETTTCCEEEEEECTTCCCEEE
T ss_pred EEEECCC--------Cc--------EEEEEeCCCCcEEEEEEcCCEEEEEeCCCcEEEEECCCCceeeeecCCCCccEEE
Confidence 9999998 65 6778889999999999999999999999999999999876433332445667789
Q ss_pred EEcCCcEEEEEcCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEEE-cCCceE
Q psy12614 349 LAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYS-TESCVR 427 (708)
Q Consensus 349 ~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~-~d~~i~ 427 (708)
+++++++++++.++.|++||+.+++ .+......+...|.+++|+ +..+++++ .++.+.
T Consensus 399 ~~~~~~~l~~~~dg~i~iwd~~~g~--------------------~~~~~~~~~~~~v~~v~~~-~~~l~~~~~~~g~~~ 457 (464)
T 3v7d_B 399 FYVSDNILVSGSENQFNIYNLRSGK--------------------LVHANILKDADQIWSVNFK-GKTLVAAVEKDGQSF 457 (464)
T ss_dssp EEECSSEEEEEETTEEEEEETTTCC--------------------EEESCTTTTCSEEEEEEEE-TTEEEEEEEETTEEE
T ss_pred EEeCCCEEEEecCCeEEEEECCCCc--------------------EEehhhccCCCcEEEEEec-CCEEEEEEEeCCeEE
Confidence 9999999999889999999999877 3443455778899999997 33344444 477766
Q ss_pred EEEEE
Q psy12614 428 LHSLD 432 (708)
Q Consensus 428 i~~~~ 432 (708)
+|-++
T Consensus 458 i~~ld 462 (464)
T 3v7d_B 458 LEILD 462 (464)
T ss_dssp EEEEE
T ss_pred EEEee
Confidence 66554
|
| >4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-38 Score=316.72 Aligned_cols=309 Identities=13% Similarity=0.150 Sum_probs=227.3
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcC------CCcEEEEECCCCe
Q psy12614 31 CIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGL------QGFVNEYDMRRLN 102 (708)
Q Consensus 31 ~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~------d~~i~vwd~~~~~ 102 (708)
.+.+.+++.++...+ +.....|++... ...+|. ..|.+++|+ |.+|++++. |+.|++|+..++.
T Consensus 10 g~d~g~~~~~~~~~g-~~~~~~w~~p~~-----~p~~H~--~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~ 81 (357)
T 4g56_B 10 GVDLGTENLYFQSNG-SSKGSAWGRPVT-----APACME--VQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGA 81 (357)
T ss_dssp ------------------------------------CCC--SEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC--
T ss_pred CCCCCccceEEecCC-CccccccCCCCC-----Cccccc--CCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCC
Confidence 455666666655544 567899998653 345788 999999999 999999997 7889999988875
Q ss_pred Ee----EEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEE--EecccccccEEEEEECCCCCEEEEecCC
Q psy12614 103 IK----SSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYE--KLLDRQQGRILCTAWHSSGDYLVTGCAA 176 (708)
Q Consensus 103 ~~----~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~--~~~~~~~~~v~~~~~s~d~~~l~~~~~d 176 (708)
+. .....|...|.+++|+|++.+ ++++.||.|++||+.+++.... ....+|.+.|.+++|+|++++|++++.|
T Consensus 82 ~~~~~~~~~~~~~~~V~~~~~s~d~~~-l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~d 160 (357)
T 4g56_B 82 PNESLCTAGVQTEAGVTDVAWVSEKGI-LVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKD 160 (357)
T ss_dssp -CGGGCSEEEECSSCEEEEEEETTTEE-EEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETT
T ss_pred cceeEecccCCCCCCEEEEEEcCCCCE-EEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCC
Confidence 43 345578899999999999865 5678899999999998765421 2345789999999999999999999999
Q ss_pred -eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCC--EEEEEcCCCcEEEEeCCCCeeEEEee--ccccCeEEEE
Q psy12614 177 -AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADF--TIITGDSGGFVRFWDGKTGVQWSDVK--THKKDILALT 251 (708)
Q Consensus 177 -~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~l~~~~~dg~i~~wd~~~~~~~~~~~--~~~~~i~~~~ 251 (708)
.|++||+++++.+..+.. |...|.+++|+|++ .+++++.||.|++||+++++....+. .+...+.+++
T Consensus 161 g~v~iwd~~~~~~~~~~~~-------h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~ 233 (357)
T 4g56_B 161 FSVKVWDLSQKAVLKSYNA-------HSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVT 233 (357)
T ss_dssp SCEEEEETTTTEEEEEECC-------CSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEE
T ss_pred CeEEEEECCCCcEEEEEcC-------CCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchh
Confidence 999999999998888763 38899999999987 38899999999999999988766543 4677899999
Q ss_pred EeCCC-CEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe---CCEEEEEcCCCeEEEE
Q psy12614 252 VSEDE-NYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH---GNRLYSGGLDSYLSLS 327 (708)
Q Consensus 252 ~s~~~-~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~---~~~l~s~~~d~~i~iw 327 (708)
|+|++ .+|++|+.|+.|++||+.+ ++ ....+.+|...|.+++|+ +.+|++++.|++|++|
T Consensus 234 ~sp~~~~~la~g~~d~~i~~wd~~~--------~~--------~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iw 297 (357)
T 4g56_B 234 WHPEKDDTFACGDETGNVSLVNIKN--------PD--------SAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVL 297 (357)
T ss_dssp ECTTSTTEEEEEESSSCEEEEESSC--------GG--------GCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEE
T ss_pred hhhcccceEEEeecccceeEEECCC--------Cc--------EeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEE
Confidence 99974 6889999999999999988 54 456788999999999998 3679999999999999
Q ss_pred eCCCCceeecCccCCCCceEEEEcCCcEEEEEcCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceE
Q psy12614 328 YYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIR 407 (708)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 407 (708)
|+++.. +... .+|...|+
T Consensus 298 d~~~~~-------------------------------------------------------------~~~~-~~H~~~V~ 315 (357)
T 4g56_B 298 DADFSE-------------------------------------------------------------VFRD-LSHRDFVT 315 (357)
T ss_dssp CTTSCE-------------------------------------------------------------EEEE-CCCSSCEE
T ss_pred ECCCCc-------------------------------------------------------------EeEE-CCCCCCEE
Confidence 986542 1221 26788999
Q ss_pred EEEeCC-CCcEEEE-EcCCceEEEEEEe
Q psy12614 408 CSVVSN-DGKYVAY-STESCVRLHSLDL 433 (708)
Q Consensus 408 ~~~~s~-~g~~l~~-~~d~~i~i~~~~~ 433 (708)
+++|+| ++++|++ |.|++|++|++..
T Consensus 316 ~vafsP~d~~~l~s~s~Dg~v~iW~~~~ 343 (357)
T 4g56_B 316 GVAWSPLDHSKFTTVGWDHKVLHHHLPS 343 (357)
T ss_dssp EEEECSSSTTEEEEEETTSCEEEEECC-
T ss_pred EEEEeCCCCCEEEEEcCCCeEEEEECCC
Confidence 999998 7899998 5599999999975
|
| >4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-36 Score=304.57 Aligned_cols=295 Identities=16% Similarity=0.220 Sum_probs=248.3
Q ss_pred eeeccCCCCcEEEEEEcCC-CCEEEEEeCCCcEEEEeCCCCCe----EEEEEecCCCCCcEEEEEEe--CCEEEEEcCCC
Q psy12614 19 IKFYAPEPKVINCIACEPK-SSRLAVSRADQSIEIWDISETPH----VDRVFIGDPLSNSIECLTWF--NDRLFSGGLQG 91 (708)
Q Consensus 19 ~~~~~~h~~~v~~~~~s~~-~~~la~~~~dg~v~iwd~~~~~~----~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~ 91 (708)
...+.||.+.|++++|+|+ +++||+|+.||+|+|||+.+++. ....+.+|. ..|.+++|+ +++|++++.|+
T Consensus 31 ~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~--~~V~~~~~s~dg~~l~s~~~d~ 108 (340)
T 4aow_A 31 RGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHS--HFVSDVVISSDGQFALSGSWDG 108 (340)
T ss_dssp EEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCS--SCEEEEEECTTSSEEEEEETTS
T ss_pred EEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCC--CCEEEEEECCCCCEEEEEcccc
Confidence 3468999999999999998 68999999999999999987542 335789999 999999999 89999999999
Q ss_pred cEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCC--CE
Q psy12614 92 FVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSG--DY 169 (708)
Q Consensus 92 ~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~--~~ 169 (708)
.|++|+............+...+..+.+++++++|++++.|+.+++||....... .....+|...+..++|++++ .+
T Consensus 109 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~ 187 (340)
T 4aow_A 109 TLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKY-TVQDESHSEWVSCVRFSPNSSNPI 187 (340)
T ss_dssp EEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEE-EECSSSCSSCEEEEEECSCSSSCE
T ss_pred cceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceE-EEEeccccCcccceEEccCCCCcE
Confidence 9999999999999999999999999999999999999999999999998876554 25677899999999998875 57
Q ss_pred EEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCeeEEEeeccccCe
Q psy12614 170 LVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDVKTHKKDI 247 (708)
Q Consensus 170 l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i 247 (708)
+++++.| .|++||+.+++.+..+. .|...|.+++|+|+++ +++++.||.|++||+++++.+..+.. ...|
T Consensus 188 ~~s~~~d~~i~i~d~~~~~~~~~~~-------~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~-~~~v 259 (340)
T 4aow_A 188 IVSCGWDKLVKVWNLANCKLKTNHI-------GHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG-GDII 259 (340)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEEC-------CCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEEC-SSCE
T ss_pred EEEEcCCCEEEEEECCCCceeeEec-------CCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecC-CceE
Confidence 8899999 99999999999888775 3488999999999995 88999999999999999999988874 5689
Q ss_pred EEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEEEcCCCeEE
Q psy12614 248 LALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSGGLDSYLS 325 (708)
Q Consensus 248 ~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~~~d~~i~ 325 (708)
.+++|+|++.+ ++++.|+.|++||+........... .........|...|.+++|+ +++|++|+.||.|+
T Consensus 260 ~~~~~~~~~~~-~~~~~d~~i~iwd~~~~~~~~~~~~-------~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~ 331 (340)
T 4aow_A 260 NALCFSPNRYW-LCAATGPSIKIWDLEGKIIVDELKQ-------EVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVR 331 (340)
T ss_dssp EEEEECSSSSE-EEEEETTEEEEEETTTTEEEEEECC-------C-------CCCCCEEEEEECTTSSEEEEEETTSCEE
T ss_pred EeeecCCCCce-eeccCCCEEEEEECCCCeEEEeccc-------cceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEE
Confidence 99999998855 5566799999999987111100000 01223345788999999999 88999999999999
Q ss_pred EEeCCCC
Q psy12614 326 LSYYPPK 332 (708)
Q Consensus 326 iw~~~~~ 332 (708)
+||+.++
T Consensus 332 iW~~~tG 338 (340)
T 4aow_A 332 VWQVTIG 338 (340)
T ss_dssp EEEEEC-
T ss_pred EEeCCCc
Confidence 9998765
|
| >3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-36 Score=308.37 Aligned_cols=288 Identities=13% Similarity=0.192 Sum_probs=257.4
Q ss_pred eeeeccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEE
Q psy12614 18 NIKFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNE 95 (708)
Q Consensus 18 ~~~~~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~v 95 (708)
+...+.+|.+.|++++|+|++++||+|+.||.|+|||+.+++.+. .+.+|. ..|.+++|+ +++|++++.||.|++
T Consensus 24 ~~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~-~~~~h~--~~v~~~~~~~~~~~l~s~~~dg~i~i 100 (369)
T 3zwl_B 24 KAIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLG-TLDGHT--GTIWSIDVDCFTKYCVTGSADYSIKL 100 (369)
T ss_dssp EEEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEE-EECCCS--SCEEEEEECTTSSEEEEEETTTEEEE
T ss_pred ccEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhh-hhhhcC--CcEEEEEEcCCCCEEEEEeCCCeEEE
Confidence 344578999999999999999999999999999999999998876 899999 999999999 899999999999999
Q ss_pred EECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCC-----CcEEEEEccCCcEE---------EEEecccccc--cEE
Q psy12614 96 YDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQ-----GHINLFQISDEGLL---------YEKLLDRQQG--RIL 159 (708)
Q Consensus 96 wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d-----~~i~iwd~~~~~~~---------~~~~~~~~~~--~v~ 159 (708)
||+.+++.+..+. +...|.+++|+|+++++++++.+ +.|++||+..+... ....+..|.+ .+.
T Consensus 101 wd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (369)
T 3zwl_B 101 WDVSNGQCVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAAT 179 (369)
T ss_dssp EETTTCCEEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEE
T ss_pred EECCCCcEEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCcccee
Confidence 9999999998888 88999999999999999999998 99999999865321 0023334555 899
Q ss_pred EEEECCCCCEEEEecCC-eEEEEEcCC-CceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCee
Q psy12614 160 CTAWHSSGDYLVTGCAA-AVRVWDIHK-GHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQ 236 (708)
Q Consensus 160 ~~~~s~d~~~l~~~~~d-~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~ 236 (708)
+++|+|++++|++++.+ .|++||+.+ ++.+..+.. +...|.+++|+|++. +++++.||.|++||+.+++.
T Consensus 180 ~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-------~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~ 252 (369)
T 3zwl_B 180 VAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDL-------HEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQV 252 (369)
T ss_dssp EEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEEC-------CSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCE
T ss_pred EEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEec-------CCCceeEEEECCCCCEEEEecCCceEEEEECCCCce
Confidence 99999999999999999 999999998 666666653 378899999999995 88999999999999999999
Q ss_pred EEEeeccccCeEEEEEeCCCCEEEEEecCC--------------eEEEEEccCCcccccCCCCCCCCcceEEeEEEeccc
Q psy12614 237 WSDVKTHKKDILALTVSEDENYLYCAGVDP--------------TVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHE 302 (708)
Q Consensus 237 ~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg--------------~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 302 (708)
+..+. +...+.+++|+|+++++++++.++ .+++||..+ ++ ....+.+|.
T Consensus 253 ~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~--------~~--------~~~~~~~~~ 315 (369)
T 3zwl_B 253 LKKYE-TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIF--------EE--------EIGRVQGHF 315 (369)
T ss_dssp EEEEE-CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTT--------CC--------EEEEEECCS
T ss_pred eeeec-CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCC--------Cc--------chhheeccc
Confidence 88887 788999999999999999999988 899999988 76 677888999
Q ss_pred cceEEEEEe--CCEEEEEcCCCeEEEEeCCCCc
Q psy12614 303 GDVKSLALH--GNRLYSGGLDSYLSLSYYPPKT 333 (708)
Q Consensus 303 ~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~~~ 333 (708)
..|.+++|+ +++|++++.||.|++|++....
T Consensus 316 ~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~ 348 (369)
T 3zwl_B 316 GPLNTVAISPQGTSYASGGEDGFIRLHHFEKSY 348 (369)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEEECHHH
T ss_pred CcEEEEEECCCCCEEEEEcCCCeEEEEECcccc
Confidence 999999999 8899999999999999997654
|
| >1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-37 Score=318.67 Aligned_cols=294 Identities=13% Similarity=0.131 Sum_probs=254.7
Q ss_pred ceeeeeeeeccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCC------eEEEEEecCCCCCcEEEEEEe-C----
Q psy12614 13 TYGVHNIKFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETP------HVDRVFIGDPLSNSIECLTWF-N---- 81 (708)
Q Consensus 13 ~~~~~~~~~~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~------~~~~~~~~h~~~~~v~~l~~~-~---- 81 (708)
.......+.+.+|.+.|++++|+| ++||+|+.||.|+|||+.+++ .+. .+.+|. ..|.+++|+ .
T Consensus 3 ~~~~~~~~~~~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~-~~~~h~--~~v~~~~~~~~~~~~ 77 (397)
T 1sq9_A 3 KVFIATANAGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSY-SHFVHK--SGLHHVDVLQAIERD 77 (397)
T ss_dssp CEEEEEEEESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEE-EEECCT--TCEEEEEEEEEEETT
T ss_pred hhhhhhhhhhhhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCCCcce-EEecCC--CcEEEEEEecccccC
Confidence 344566778999999999999999 799999999999999999987 454 788999 999999999 5
Q ss_pred ----CEEEEEcCCCcEEEEECCCCeE-----eEEEeec-----CCceEEEEEe----cCCCE-EEEEeCCCcEEEEEccC
Q psy12614 82 ----DRLFSGGLQGFVNEYDMRRLNI-----KSSTAVT-----SGTCWCLSVH----KKKRL-LAAGTEQGHINLFQISD 142 (708)
Q Consensus 82 ----~~l~s~~~d~~i~vwd~~~~~~-----~~~~~~~-----~~~v~~~~~s----~~~~~-la~~~~d~~i~iwd~~~ 142 (708)
++|++++.||.|++||+.+++. ...+..| ...|.+++|+ |++++ |++++.||.|++||+.+
T Consensus 78 g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 157 (397)
T 1sq9_A 78 AFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHP 157 (397)
T ss_dssp TEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEES
T ss_pred CccccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCc
Confidence 6899999999999999999887 8888888 5899999999 99999 99999999999999988
Q ss_pred ------CcEEE---EEec-------ccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCC---
Q psy12614 143 ------EGLLY---EKLL-------DRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSK--- 202 (708)
Q Consensus 143 ------~~~~~---~~~~-------~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~--- 202 (708)
++... ...+ ..|...|.+++|+|++ +|++++.+ .|++||+++++.+..+.... .|
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~----~h~~~ 232 (397)
T 1sq9_A 158 FADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQH----SMINN 232 (397)
T ss_dssp SSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC-------CC
T ss_pred cccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccc----ccccc
Confidence 54431 0033 4578899999999999 99999999 99999999999888876411 14
Q ss_pred ceeEEEEEEccCCE-EEEEcCC---CcEEEEeCCCCeeEEEeec-------------cccCeEEEEEeCCCCEEEEEecC
Q psy12614 203 NTAVWCVAFCADFT-IITGDSG---GFVRFWDGKTGVQWSDVKT-------------HKKDILALTVSEDENYLYCAGVD 265 (708)
Q Consensus 203 ~~~v~~~~~~~~~~-l~~~~~d---g~i~~wd~~~~~~~~~~~~-------------~~~~i~~~~~s~~~~~l~~~~~d 265 (708)
...+.+++|+|++. +++++.| |.|++||+.+++.+..+.+ |...|.+++|+|++++|++++.|
T Consensus 233 ~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 312 (397)
T 1sq9_A 233 SNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWD 312 (397)
T ss_dssp CCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETT
T ss_pred CCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCC
Confidence 67899999999995 8899999 9999999999999999998 99999999999999999999999
Q ss_pred CeEEEEEccCCcccccCCCCCCCCcceEEeEEEe------cc---------------ccceEEEEEe--C----------
Q psy12614 266 PTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRV------IH---------------EGDVKSLALH--G---------- 312 (708)
Q Consensus 266 g~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~------~~---------------~~~v~~l~~~--~---------- 312 (708)
|.|++||+.+ ++ ....+. .| ...|.+++|+ +
T Consensus 313 g~i~iwd~~~--------~~--------~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~ 376 (397)
T 1sq9_A 313 GKLRFWDVKT--------KE--------RITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLN 376 (397)
T ss_dssp SEEEEEETTT--------TE--------EEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTS
T ss_pred CeEEEEEcCC--------Cc--------eeEEEecccCcccchhhhhccccccccccCCceeEEEecccccccccccccc
Confidence 9999999988 64 566666 67 8999999999 4
Q ss_pred CEEEEEcCCCeEEEEeCCCC
Q psy12614 313 NRLYSGGLDSYLSLSYYPPK 332 (708)
Q Consensus 313 ~~l~s~~~d~~i~iw~~~~~ 332 (708)
.+|++++.|+.|++|++.++
T Consensus 377 ~~l~s~~~dg~i~iw~~~~g 396 (397)
T 1sq9_A 377 ESLCCVCLDRSIRWFREAGG 396 (397)
T ss_dssp CEEEEEETTTEEEEEEEEC-
T ss_pred ceEEEecCCCcEEEEEcCCC
Confidence 69999999999999998654
|
| >1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-36 Score=306.22 Aligned_cols=307 Identities=18% Similarity=0.274 Sum_probs=245.2
Q ss_pred cEEEEeCCCCCeEEE---EEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECCCCeEeEEEeecCC-----------
Q psy12614 49 SIEIWDISETPHVDR---VFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSG----------- 112 (708)
Q Consensus 49 ~v~iwd~~~~~~~~~---~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~----------- 112 (708)
...+|+....+.... ...+|. ..|.+++|+ |++|++++ ++++++|++.+++.+..+..|..
T Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~h~--~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~ 117 (393)
T 1erj_A 41 YYILYNPALPREIDVELHKSLDHT--SVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTS 117 (393)
T ss_dssp CEEEECTTSCCCEEEEEEEEEECS--SCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC--------------
T ss_pred eEEEECCCCCcccCceeEEecCCC--CEEEEEEECCCCCEEEEEc-CCcEEEEEecCCCEEEEecCcccccccccccccc
Confidence 455777665443211 223688 999999999 88888876 78999999999998888765532
Q ss_pred -------ceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcC
Q psy12614 113 -------TCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIH 184 (708)
Q Consensus 113 -------~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~ 184 (708)
.|.+++|+|++++||+|+.|+.|++||+.+++.. ..+.+|...|.+++|+|++++|++++.| .|++||+.
T Consensus 118 ~~~~~~~~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~--~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~ 195 (393)
T 1erj_A 118 SSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIV--MILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLR 195 (393)
T ss_dssp ---CCCCBEEEEEECTTSSEEEEEETTSCEEEEETTTTEEE--EEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred ccCCCceeEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEE--EEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECC
Confidence 4999999999999999999999999999999876 7789999999999999999999999999 99999999
Q ss_pred CCceEEEEEecccCCCCCceeEEEEEEcc-CCE-EEEEcCCCcEEEEeCCCCeeEEEe-------eccccCeEEEEEeCC
Q psy12614 185 KGHAIHKMSLDKSSKFSKNTAVWCVAFCA-DFT-IITGDSGGFVRFWDGKTGVQWSDV-------KTHKKDILALTVSED 255 (708)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~-l~~~~~dg~i~~wd~~~~~~~~~~-------~~~~~~i~~~~~s~~ 255 (708)
+++....+.. ...+.+++|+| +++ +++++.||.|++||+++++.+..+ .+|...|.+++|+|+
T Consensus 196 ~~~~~~~~~~--------~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~ 267 (393)
T 1erj_A 196 TGQCSLTLSI--------EDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRD 267 (393)
T ss_dssp TTEEEEEEEC--------SSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTT
T ss_pred CCeeEEEEEc--------CCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCC
Confidence 9988777653 56799999999 775 899999999999999999887776 578999999999999
Q ss_pred CCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEEEcCCCeEEEEeCCCCc
Q psy12614 256 ENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSGGLDSYLSLSYYPPKT 333 (708)
Q Consensus 256 ~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~~~ 333 (708)
+++|++++.|+.|++||+.......... ..........+.+|...|.+++++ +.+|++++.|+.|++||+.+..
T Consensus 268 g~~l~s~s~d~~v~~wd~~~~~~~~~~~----~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~ 343 (393)
T 1erj_A 268 GQSVVSGSLDRSVKLWNLQNANNKSDSK----TPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGN 343 (393)
T ss_dssp SSEEEEEETTSEEEEEEC-------------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCC
T ss_pred CCEEEEEeCCCEEEEEECCCCCCccccc----CCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCe
Confidence 9999999999999999998611100000 000011345677888999999998 7889999999999888875432
Q ss_pred eeecCccCCCCceEEEEcCCcEEEEEcCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCC
Q psy12614 334 LVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSN 413 (708)
Q Consensus 334 ~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~ 413 (708)
......+|...|.++++++
T Consensus 344 -------------------------------------------------------------~~~~l~~h~~~v~~v~~~~ 362 (393)
T 1erj_A 344 -------------------------------------------------------------PLLMLQGHRNSVISVAVAN 362 (393)
T ss_dssp -------------------------------------------------------------EEEEEECCSSCEEEEEECS
T ss_pred -------------------------------------------------------------EEEEECCCCCCEEEEEecC
Confidence 2233346888899999875
Q ss_pred ------CCcEEEEE-cCCceEEEEEEe
Q psy12614 414 ------DGKYVAYS-TESCVRLHSLDL 433 (708)
Q Consensus 414 ------~g~~l~~~-~d~~i~i~~~~~ 433 (708)
++.+|+++ .|++|++|++..
T Consensus 363 ~~~~~p~~~~l~sgs~Dg~i~iW~~~~ 389 (393)
T 1erj_A 363 GSSLGPEYNVFATGSGDCKARIWKYKK 389 (393)
T ss_dssp SCTTCTTCEEEEEEETTSEEEEEEEEE
T ss_pred CcCcCCCCCEEEEECCCCcEEECcccc
Confidence 78899985 599999999975
|
| >4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-36 Score=305.26 Aligned_cols=313 Identities=13% Similarity=0.168 Sum_probs=245.6
Q ss_pred EEeCCCc--EEEEeCCCCC-eEEEEEecCCCCCcEEEEEEe---CCEEEEEcCCCcEEEEECCCCe-----EeEEEeecC
Q psy12614 43 VSRADQS--IEIWDISETP-HVDRVFIGDPLSNSIECLTWF---NDRLFSGGLQGFVNEYDMRRLN-----IKSSTAVTS 111 (708)
Q Consensus 43 ~~~~dg~--v~iwd~~~~~-~~~~~~~~h~~~~~v~~l~~~---~~~l~s~~~d~~i~vwd~~~~~-----~~~~~~~~~ 111 (708)
+|...|+ +.++...+.+ .++.+|.||. +.|++|+|+ +++|+||+.|++|++||+.+.+ +...+.+|.
T Consensus 9 ~g~d~g~~~~~~~~~~~~~~~l~~tL~GH~--~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~ 86 (340)
T 4aow_A 9 SGVDLGTENLYFQSMMTEQMTLRGTLKGHN--GWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHS 86 (340)
T ss_dssp -----------------CEEEEEEEECCCS--SCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCS
T ss_pred cccCCCCccEEEEEccCCceEEEEEECCcc--CCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCC
Confidence 4444444 4444444433 2345899999 999999999 5799999999999999987643 567888999
Q ss_pred CceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEE
Q psy12614 112 GTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIH 190 (708)
Q Consensus 112 ~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~ 190 (708)
..|.+++|+|++++|++++.|+.|++|+....... .....+...+..+.+++++++|++++.| .+++||+.......
T Consensus 87 ~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~ 164 (340)
T 4aow_A 87 HFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTT--RRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYT 164 (340)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEE--EEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEE
T ss_pred CCEEEEEECCCCCEEEEEcccccceEEeeccccee--eeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEE
Confidence 99999999999999999999999999999988876 5566778889999999999999999999 99999987665443
Q ss_pred EEEecccCCCCCceeEEEEEEccCC---EEEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEecCCe
Q psy12614 191 KMSLDKSSKFSKNTAVWCVAFCADF---TIITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPT 267 (708)
Q Consensus 191 ~~~~~~~~~~~~~~~v~~~~~~~~~---~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~ 267 (708)
.... .+...+..++|++++ .+++++.|+.|++||+++++.+..+.+|...|.+++|+|++++|++++.||.
T Consensus 165 ~~~~------~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~ 238 (340)
T 4aow_A 165 VQDE------SHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQ 238 (340)
T ss_dssp ECSS------SCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCE
T ss_pred EEec------cccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCe
Confidence 3222 347889999999876 2789999999999999999999999999999999999999999999999999
Q ss_pred EEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe-CCEEEEEcCCCeEEEEeCCCCceeecCccCCCCce
Q psy12614 268 VVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH-GNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTP 346 (708)
Q Consensus 268 i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~-~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~ 346 (708)
|++||+.+ ++ ....+. +...|.+++++ +..+++++.|+.|++||+++.....
T Consensus 239 i~iwd~~~--------~~--------~~~~~~-~~~~v~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~---------- 291 (340)
T 4aow_A 239 AMLWDLNE--------GK--------HLYTLD-GGDIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVD---------- 291 (340)
T ss_dssp EEEEETTT--------TE--------EEEEEE-CSSCEEEEEECSSSSEEEEEETTEEEEEETTTTEEEE----------
T ss_pred EEEEEecc--------Cc--------eeeeec-CCceEEeeecCCCCceeeccCCCEEEEEECCCCeEEE----------
Confidence 99999998 53 344444 45678999998 7778888889999999987654211
Q ss_pred EEEEcCCcEEEEEcCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEEE-cCCc
Q psy12614 347 VSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYS-TESC 425 (708)
Q Consensus 347 ~~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~-~d~~ 425 (708)
.+... ........|...|.+++|+|||++|+++ .||.
T Consensus 292 ---------------------~~~~~---------------------~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~ 329 (340)
T 4aow_A 292 ---------------------ELKQE---------------------VISTSSKAEPPQCTSLAWSADGQTLFAGYTDNL 329 (340)
T ss_dssp ---------------------EECCC----------------------------CCCCCEEEEEECTTSSEEEEEETTSC
T ss_pred ---------------------ecccc---------------------ceeeeccCCCCCEEEEEECCCCCEEEEEeCCCE
Confidence 11110 1222234678899999999999999985 5999
Q ss_pred eEEEEEEec
Q psy12614 426 VRLHSLDLD 434 (708)
Q Consensus 426 i~i~~~~~~ 434 (708)
|+||++.++
T Consensus 330 v~iW~~~tG 338 (340)
T 4aow_A 330 VRVWQVTIG 338 (340)
T ss_dssp EEEEEEEC-
T ss_pred EEEEeCCCc
Confidence 999999874
|
| >4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-37 Score=304.65 Aligned_cols=241 Identities=13% Similarity=0.155 Sum_probs=209.1
Q ss_pred CCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEE---EEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEEC
Q psy12614 24 PEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVD---RVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDM 98 (708)
Q Consensus 24 ~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~---~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~ 98 (708)
.|...|++++|+|++ .|++|+.||+|+|||+.+++.+. ..+.+|. ..|.+++|+ +++|++++.|++|++||+
T Consensus 80 ~~~~~v~~~~~s~d~-~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~--~~V~~v~~spdg~~l~sgs~d~~i~iwd~ 156 (344)
T 4gqb_B 80 QTEAGVADLTWVGER-GILVASDSGAVELWELDENETLIVSKFCKYEHD--DIVSTVSVLSSGTQAVSGSKDICIKVWDL 156 (344)
T ss_dssp EESSCEEEEEEETTT-EEEEEETTSEEEEEEECTTSSCEEEEEEEECCS--SCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred ccCCCEEEEEEeCCC-eEEEEECCCEEEEEeccCCCceeEeeccccCCC--CCEEEEEECCCCCEEEEEeCCCeEEEEEC
Confidence 356789999999995 68899999999999999887543 2456899 999999999 899999999999999999
Q ss_pred CCCeEeEEEeecCCceEEEEEecCCC-EEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCC-CCEEEEecCC
Q psy12614 99 RRLNIKSSTAVTSGTCWCLSVHKKKR-LLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSS-GDYLVTGCAA 176 (708)
Q Consensus 99 ~~~~~~~~~~~~~~~v~~~~~s~~~~-~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d-~~~l~~~~~d 176 (708)
++++++..+.+|.+.|.+++|+|++. +|++++.|+.|++||+++++.........+...+.+++|+|+ +++|++++.|
T Consensus 157 ~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~d 236 (344)
T 4gqb_B 157 AQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDEN 236 (344)
T ss_dssp TTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETT
T ss_pred CCCcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccC
Confidence 99999999999999999999999985 789999999999999999987743334456678999999995 5788999999
Q ss_pred -eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCC-E-EEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEe
Q psy12614 177 -AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADF-T-IITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVS 253 (708)
Q Consensus 177 -~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~-l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s 253 (708)
.|++||+++++.+..+. .|...|++++|+|++ + +++|+.|+.|++||+.+++.+ .+.+|.+.|.+++|+
T Consensus 237 g~v~~wd~~~~~~~~~~~-------~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~-~~~~H~~~V~~v~~s 308 (344)
T 4gqb_B 237 GTVSLVDTKSTSCVLSSA-------VHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELF-RSQAHRDFVRDATWS 308 (344)
T ss_dssp SEEEEEESCC--CCEEEE-------CCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEE-EECCCSSCEEEEEEC
T ss_pred CcEEEEECCCCcEEEEEc-------CCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEE-EEcCCCCCEEEEEEe
Confidence 99999999999988886 348899999999998 4 889999999999999988765 567899999999999
Q ss_pred CCCC-EEEEEecCCeEEEEEccC
Q psy12614 254 EDEN-YLYCAGVDPTVVCFQRTR 275 (708)
Q Consensus 254 ~~~~-~l~~~~~dg~i~iw~~~~ 275 (708)
|+++ +|++++.|+.|++|++.+
T Consensus 309 p~~~~llas~s~D~~v~~w~v~~ 331 (344)
T 4gqb_B 309 PLNHSLLTTVGWDHQVVHHVVPT 331 (344)
T ss_dssp SSSTTEEEEEETTSCEEEEECCC
T ss_pred CCCCeEEEEEcCCCeEEEEECCC
Confidence 9986 567899999999999987
|
| >1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-36 Score=301.37 Aligned_cols=277 Identities=15% Similarity=0.304 Sum_probs=246.5
Q ss_pred ccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEE--EEEe--cCCCCCcEEEEEEe--CCEEEEEcCCCcEEE
Q psy12614 22 YAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVD--RVFI--GDPLSNSIECLTWF--NDRLFSGGLQGFVNE 95 (708)
Q Consensus 22 ~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~--~~~~--~h~~~~~v~~l~~~--~~~l~s~~~d~~i~v 95 (708)
..+|.+.|++++|+|++++|++++ ||.|++||+.++.... ..+. +|. ..|.+++|+ +++|++++.|+.|++
T Consensus 47 ~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~l~~~~~d~~i~~ 123 (337)
T 1gxr_A 47 TLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRD--NYIRSCKLLPDGCTLIVGGEASTLSI 123 (337)
T ss_dssp EECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTT--SBEEEEEECTTSSEEEEEESSSEEEE
T ss_pred eccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCceeeeecccccCCC--CcEEEEEEcCCCCEEEEEcCCCcEEE
Confidence 347999999999999999999998 9999999998764321 1333 777 999999999 889999999999999
Q ss_pred EECCCCe--EeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEe
Q psy12614 96 YDMRRLN--IKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTG 173 (708)
Q Consensus 96 wd~~~~~--~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~ 173 (708)
||+.+++ ....+..|...|.+++|+|++++|++++.|+.|++||+.+++.. ..+..|...|.+++|+|++++|+++
T Consensus 124 ~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~--~~~~~~~~~i~~~~~~~~~~~l~~~ 201 (337)
T 1gxr_A 124 WDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLV--RQFQGHTDGASCIDISNDGTKLWTG 201 (337)
T ss_dssp EECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEE--EEECCCSSCEEEEEECTTSSEEEEE
T ss_pred EECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCcee--eeeecccCceEEEEECCCCCEEEEE
Confidence 9999987 66778899999999999999999999999999999999998876 6788899999999999999999999
Q ss_pred cCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEE
Q psy12614 174 CAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALT 251 (708)
Q Consensus 174 ~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~ 251 (708)
+.+ .|++||+.+++.+..+.. ...+.+++|+|++. +++++.+|.|++||+.+++.. .+..|...|.+++
T Consensus 202 ~~dg~i~~~d~~~~~~~~~~~~--------~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~-~~~~~~~~v~~~~ 272 (337)
T 1gxr_A 202 GLDNTVRSWDLREGRQLQQHDF--------TSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKY-QLHLHESCVLSLK 272 (337)
T ss_dssp ETTSEEEEEETTTTEEEEEEEC--------SSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEE-EECCCSSCEEEEE
T ss_pred ecCCcEEEEECCCCceEeeecC--------CCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeE-EEcCCccceeEEE
Confidence 999 999999999988877642 67799999999995 889999999999999887754 5677999999999
Q ss_pred EeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEEEcCCCeEEEEeC
Q psy12614 252 VSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSGGLDSYLSLSYY 329 (708)
Q Consensus 252 ~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~~~d~~i~iw~~ 329 (708)
|+|++++|++++.||.|++|++.+ ++ .. ....|...|.+++|+ +++|++++.||.|++|++
T Consensus 273 ~~~~~~~l~~~~~dg~i~~~~~~~--------~~--------~~-~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~ 335 (337)
T 1gxr_A 273 FAYCGKWFVSTGKDNLLNAWRTPY--------GA--------SI-FQSKESSSVLSCDISVDDKYIVTGSGDKKATVYEV 335 (337)
T ss_dssp ECTTSSEEEEEETTSEEEEEETTT--------CC--------EE-EEEECSSCEEEEEECTTSCEEEEEETTSCEEEEEE
T ss_pred ECCCCCEEEEecCCCcEEEEECCC--------Ce--------EE-EEecCCCcEEEEEECCCCCEEEEecCCCeEEEEEE
Confidence 999999999999999999999998 64 22 345688999999999 889999999999999986
|
| >1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-37 Score=310.12 Aligned_cols=301 Identities=14% Similarity=0.207 Sum_probs=248.4
Q ss_pred eccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCC--eEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEE
Q psy12614 21 FYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETP--HVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEY 96 (708)
Q Consensus 21 ~~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~--~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vw 96 (708)
++..|.+.|++++|+|++++||+|+.||.|+|||+.+++ .+. .+.+|. ..|.+++|+ +++|++++.||.|++|
T Consensus 3 ~~~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~-~~~~h~--~~v~~~~~~~~~~~l~~~~~dg~i~vw 79 (372)
T 1k8k_C 3 YHSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVH-ELKEHN--GQVTGVDWAPDSNRIVTCGTDRNAYVW 79 (372)
T ss_dssp EEESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEE-EEECCS--SCEEEEEEETTTTEEEEEETTSCEEEE
T ss_pred eecccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeee-eecCCC--CcccEEEEeCCCCEEEEEcCCCeEEEE
Confidence 455699999999999999999999999999999999886 554 888999 999999999 8999999999999999
Q ss_pred ECCCCeEeEEE--eecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcE--EEEEecccccccEEEEEECCCCCEEEE
Q psy12614 97 DMRRLNIKSST--AVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGL--LYEKLLDRQQGRILCTAWHSSGDYLVT 172 (708)
Q Consensus 97 d~~~~~~~~~~--~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~--~~~~~~~~~~~~v~~~~~s~d~~~l~~ 172 (708)
|+.+++....+ ..|...|.+++|+|++++|++++.|+.|++||+..+.. .......+|...|.+++|+|++++|++
T Consensus 80 d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~ 159 (372)
T 1k8k_C 80 TLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAA 159 (372)
T ss_dssp EEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEE
T ss_pred ECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEE
Confidence 99998755444 57899999999999999999999999999999998762 112445678999999999999999999
Q ss_pred ecCC-eEEEEEcC------------------CCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCC
Q psy12614 173 GCAA-AVRVWDIH------------------KGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGK 232 (708)
Q Consensus 173 ~~~d-~i~iwd~~------------------~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~ 232 (708)
++.| .|++||+. .++.+..+. .+...+.+++|+|++. +++++.||.|++||++
T Consensus 160 ~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~ 232 (372)
T 1k8k_C 160 GSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESS-------SSCGWVHGVCFSANGSRVAWVSHDSTVCLADAD 232 (372)
T ss_dssp EETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECC-------CCSSCEEEEEECSSSSEEEEEETTTEEEEEEGG
T ss_pred EcCCCCEEEEEcccccccccccccccccccchhhheEecC-------CCCCeEEEEEECCCCCEEEEEeCCCEEEEEECC
Confidence 9999 99999954 566666654 3378899999999994 9999999999999999
Q ss_pred CCeeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccC--CcccccCCCCCCC----------------CcceEE
Q psy12614 233 TGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTR--KPQVCSTSGPEQG----------------SSVWVR 294 (708)
Q Consensus 233 ~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~--~~~~~~~~g~~~~----------------~~~~~~ 294 (708)
+++.+..+..|...|.+++|+|++++|+++ .|+.|++|++.. +.-.+...-.... ......
T Consensus 233 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (372)
T 1k8k_C 233 KKMAVATLASETLPLLAVTFITESSLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASS 311 (372)
T ss_dssp GTTEEEEEECSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC--
T ss_pred CCceeEEEccCCCCeEEEEEecCCCEEEEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhccccccc
Confidence 999999999999999999999999888877 899999999976 2100000000000 000001
Q ss_pred e------EEE-eccccceEEEEEe---C---CEEEEEcCCCeEEEEeCCCC
Q psy12614 295 S------VNR-VIHEGDVKSLALH---G---NRLYSGGLDSYLSLSYYPPK 332 (708)
Q Consensus 295 ~------~~~-~~~~~~v~~l~~~---~---~~l~s~~~d~~i~iw~~~~~ 332 (708)
. ..+ .+|...|.+++|. + .+|++++.||.|++|++.+.
T Consensus 312 ~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~~~ 362 (372)
T 1k8k_C 312 EGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSL 362 (372)
T ss_dssp -------CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHHHH
T ss_pred ccCccccccccccccCCcceeEEecCCCcceeeEEEecCCCceEEEEecCh
Confidence 0 222 4899999999966 4 89999999999999998654
|
| >3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-36 Score=296.76 Aligned_cols=283 Identities=14% Similarity=0.198 Sum_probs=251.6
Q ss_pred eeeeeccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEE
Q psy12614 17 HNIKFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVN 94 (708)
Q Consensus 17 ~~~~~~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~ 94 (708)
+..+.+.+|.+.|++++| |++++||+|+.||.|++||+.+++... .+..|. ..|.+++|+ +++|++++.||.|+
T Consensus 9 ~~~~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~-~~~~~~--~~v~~~~~~~~~~~l~~~~~dg~i~ 84 (313)
T 3odt_A 9 QLSATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGT-VVYTGQ--GFLNSVCYDSEKELLLFGGKDTMIN 84 (313)
T ss_dssp EEEEEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEE-EEEECS--SCEEEEEEETTTTEEEEEETTSCEE
T ss_pred HHHHHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEE-EeecCC--ccEEEEEECCCCCEEEEecCCCeEE
Confidence 455678999999999999 999999999999999999998877665 888898 999999999 99999999999999
Q ss_pred EEECCCC---eEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECC-CCCEE
Q psy12614 95 EYDMRRL---NIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHS-SGDYL 170 (708)
Q Consensus 95 vwd~~~~---~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~-d~~~l 170 (708)
+|++... +....+..|...|.+++| ++++|++++.|+.|++|| .++.. ..+..|...+.+++|+| +++++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~~~--~~~~~~~~~v~~~~~~~~~~~~l 158 (313)
T 3odt_A 85 GVPLFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK--EGSLV--YNLQAHNASVWDAKVVSFSENKF 158 (313)
T ss_dssp EEETTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE--TTEEE--EEEECCSSCEEEEEEEETTTTEE
T ss_pred EEEeeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc--CCcEE--EecccCCCceeEEEEccCCCCEE
Confidence 9998764 567788899999999999 577999999999999999 45544 67778999999999988 99999
Q ss_pred EEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEEEEcCCCcEEEEeCCCCeeEEEeeccccCeEE
Q psy12614 171 VTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVKTHKKDILA 249 (708)
Q Consensus 171 ~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~ 249 (708)
++++.+ .|++|| .++....+... +...+.+++|+|++.+++++.+|.|++||+++++.+..+.+|...|.+
T Consensus 159 ~~~~~d~~i~i~d--~~~~~~~~~~~------~~~~i~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~ 230 (313)
T 3odt_A 159 LTASADKTIKLWQ--NDKVIKTFSGI------HNDVVRHLAVVDDGHFISCSNDGLIKLVDMHTGDVLRTYEGHESFVYC 230 (313)
T ss_dssp EEEETTSCEEEEE--TTEEEEEECSS------CSSCEEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEE
T ss_pred EEEECCCCEEEEe--cCceEEEEecc------CcccEEEEEEcCCCeEEEccCCCeEEEEECCchhhhhhhhcCCceEEE
Confidence 999999 999999 45555555432 388899999999999999999999999999999999999999999999
Q ss_pred EEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe-CCEEEEEcCCCeEEEEe
Q psy12614 250 LTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH-GNRLYSGGLDSYLSLSY 328 (708)
Q Consensus 250 ~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~-~~~l~s~~~d~~i~iw~ 328 (708)
++|+|++ .|++++.||.|++||+.+ ++ ....+..|...|.+++|+ ...+++++.|+.|++|+
T Consensus 231 ~~~~~~~-~l~~~~~dg~v~iwd~~~--------~~--------~~~~~~~~~~~i~~~~~~~~~~~~~~~~dg~i~iw~ 293 (313)
T 3odt_A 231 IKLLPNG-DIVSCGEDRTVRIWSKEN--------GS--------LKQVITLPAISIWSVDCMSNGDIIVGSSDNLVRIFS 293 (313)
T ss_dssp EEECTTS-CEEEEETTSEEEEECTTT--------CC--------EEEEEECSSSCEEEEEECTTSCEEEEETTSCEEEEE
T ss_pred EEEecCC-CEEEEecCCEEEEEECCC--------Cc--------eeEEEeccCceEEEEEEccCCCEEEEeCCCcEEEEe
Confidence 9999999 688999999999999998 76 677888999999999999 44478899999999999
Q ss_pred CCCCce
Q psy12614 329 YPPKTL 334 (708)
Q Consensus 329 ~~~~~~ 334 (708)
+.+...
T Consensus 294 ~~~~~~ 299 (313)
T 3odt_A 294 QEKSRW 299 (313)
T ss_dssp SCGGGC
T ss_pred CCCCce
Confidence 987653
|
| >3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-36 Score=330.16 Aligned_cols=286 Identities=16% Similarity=0.212 Sum_probs=243.2
Q ss_pred eeeeccCCCCcEEEEEEcCCC-CEEEEEeCCCcEEEEeCCCCC----eEEEEEecCCCCCcEEEEEEe--CCEEEEEcCC
Q psy12614 18 NIKFYAPEPKVINCIACEPKS-SRLAVSRADQSIEIWDISETP----HVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQ 90 (708)
Q Consensus 18 ~~~~~~~h~~~v~~~~~s~~~-~~la~~~~dg~v~iwd~~~~~----~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d 90 (708)
....+.+|.+.|++++|+|++ ++|++|+.||+|+|||+.+.. .....+.+|. ..|.+++|+ +++|++++.|
T Consensus 374 ~~~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~--~~v~~v~~s~~g~~l~sgs~D 451 (694)
T 3dm0_A 374 LKGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHS--HFVEDVVLSSDGQFALSGSWD 451 (694)
T ss_dssp EEEEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCS--SCEEEEEECTTSSEEEEEETT
T ss_pred hhhhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCC--CcEEEEEECCCCCEEEEEeCC
Confidence 345688999999999999875 799999999999999997642 2335889999 999999999 8999999999
Q ss_pred CcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEE-EEecccccccEEEEEECCCC--
Q psy12614 91 GFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLY-EKLLDRQQGRILCTAWHSSG-- 167 (708)
Q Consensus 91 ~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~-~~~~~~~~~~v~~~~~s~d~-- 167 (708)
|+|++||+.+++....+.+|...|.+++|+|++++|++++.|++|++||........ .....+|...|.+++|+|++
T Consensus 452 g~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 531 (694)
T 3dm0_A 452 GELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQ 531 (694)
T ss_dssp SEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSS
T ss_pred CcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCc
Confidence 999999999999999999999999999999999999999999999999987654321 11235688899999999987
Q ss_pred CEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCeeEEEeecccc
Q psy12614 168 DYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDVKTHKK 245 (708)
Q Consensus 168 ~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~~~~~~ 245 (708)
..|++++.| .|++||+.+++....+. +|...|++++|+|+++ +++++.||.|++||+.+++.+..+. +..
T Consensus 532 ~~l~s~s~d~~v~vwd~~~~~~~~~~~-------~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~-~~~ 603 (694)
T 3dm0_A 532 PTIVSASWDKTVKVWNLSNCKLRSTLA-------GHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLE-ANS 603 (694)
T ss_dssp CEEEEEETTSCEEEEETTTCCEEEEEC-------CCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCB-CSS
T ss_pred ceEEEEeCCCeEEEEECCCCcEEEEEc-------CCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEec-CCC
Confidence 689999999 99999999998887765 3488999999999995 8999999999999999999988876 457
Q ss_pred CeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEe-------------------ccccceE
Q psy12614 246 DILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRV-------------------IHEGDVK 306 (708)
Q Consensus 246 ~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~-------------------~~~~~v~ 306 (708)
.|.+++|+|++.+|++++ ++.|++||+.+ ++ ....+. .+...+.
T Consensus 604 ~v~~~~~sp~~~~l~~~~-~~~i~iwd~~~--------~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 666 (694)
T 3dm0_A 604 VIHALCFSPNRYWLCAAT-EHGIKIWDLES--------KS--------IVEDLKVDLKAEAEKADNSGPAATKRKVIYCT 666 (694)
T ss_dssp CEEEEEECSSSSEEEEEE-TTEEEEEETTT--------TE--------EEEEECCCCC----------------CCCCEE
T ss_pred cEEEEEEcCCCcEEEEEc-CCCEEEEECCC--------CC--------ChhhhccccccccccccccccccCCceeEEee
Confidence 899999999998877665 66799999988 32 111111 1222478
Q ss_pred EEEEe--CCEEEEEcCCCeEEEEeCC
Q psy12614 307 SLALH--GNRLYSGGLDSYLSLSYYP 330 (708)
Q Consensus 307 ~l~~~--~~~l~s~~~d~~i~iw~~~ 330 (708)
+++|+ +.+|++|+.||.|++|++.
T Consensus 667 ~l~~spdg~~l~sgs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 667 SLNWSADGSTLFSGYTDGVIRVWGIG 692 (694)
T ss_dssp EEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred eEEEcCCCCEEEEEcCCCeEEEEecc
Confidence 89999 8999999999999999985
|
| >2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-35 Score=304.08 Aligned_cols=322 Identities=19% Similarity=0.329 Sum_probs=269.4
Q ss_pred EEEecCCCCCcEEEEEEeCCEEEEEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccC
Q psy12614 63 RVFIGDPLSNSIECLTWFNDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISD 142 (708)
Q Consensus 63 ~~~~~h~~~~~v~~l~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~ 142 (708)
..+.+|. ...+.++.+++++|++++.||+|++||+.+++.+..+.+|.+.|++++|+ +++|++|+.||.|++||+.+
T Consensus 112 ~~l~~h~-~~v~~~~~~~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~ 188 (445)
T 2ovr_B 112 KVLKGHD-DHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAET 188 (445)
T ss_dssp EEEECST-TSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTT
T ss_pred EEecccC-CCcEEEEEEcCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCc
Confidence 3789998 33468888889999999999999999999999999999999999999998 56999999999999999999
Q ss_pred CcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCC-EEEEE
Q psy12614 143 EGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADF-TIITG 220 (708)
Q Consensus 143 ~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~~~ 220 (708)
++.. ..+.+|...|.++.|+ ++.+++++.| .|++||+.+++.+..+.. +...+.+++| ++ .++++
T Consensus 189 ~~~~--~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~~~~~~~-------~~~~v~~~~~--~~~~l~~~ 255 (445)
T 2ovr_B 189 GECI--HTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMG-------HVAAVRCVQY--DGRRVVSG 255 (445)
T ss_dssp TEEE--EEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCCEEEEEEC-------CSSCEEEEEE--CSSCEEEE
T ss_pred CcEE--EEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCcEEEEEcC-------CcccEEEEEE--CCCEEEEE
Confidence 9887 7788999999999995 6789999999 999999999999888763 3788999999 44 59999
Q ss_pred cCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEec
Q psy12614 221 DSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVI 300 (708)
Q Consensus 221 ~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 300 (708)
+.||.|++||+++++.+..+.+|...|.+++| +++++++++.||.|++||+.+ ++ ....+.+
T Consensus 256 ~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~--------~~--------~~~~~~~ 317 (445)
T 2ovr_B 256 AYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVET--------GN--------CIHTLTG 317 (445)
T ss_dssp ETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTT--------CC--------EEEEECC
T ss_pred cCCCEEEEEECCCCcEeEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEEECCC--------CC--------EEEEEcC
Confidence 99999999999999999999999999999999 788999999999999999998 76 6777889
Q ss_pred cccceEEEEEeCCEEEEEcCCCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEEEcCCeEEEEEecCCCCCCCCCC
Q psy12614 301 HEGDVKSLALHGNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSH 380 (708)
Q Consensus 301 ~~~~v~~l~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~ 380 (708)
|...+.++.++++.+++++.||.|++||+.+..... .+...
T Consensus 318 ~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~-------------------------------~~~~~-------- 358 (445)
T 2ovr_B 318 HQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQ-------------------------------TLQGP-------- 358 (445)
T ss_dssp CCSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEE-------------------------------EECST--------
T ss_pred CcccEEEEEEeCCEEEEEeCCCeEEEEECCCCcEEE-------------------------------EEccC--------
Confidence 999999999999999999999999999986543110 11100
Q ss_pred CCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEEE-cCCceEEEEEEecCCcceeEEeecCCcccccceeEEEE
Q psy12614 381 SNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYS-TESCVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVL 459 (708)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 459 (708)
..+...|.+++++ +++++++ .||.|++|++.+++ .+..+...........|.+++
T Consensus 359 -------------------~~~~~~v~~~~~~--~~~l~s~~~dg~v~iwd~~~~~---~~~~~~~~~~~~~~~~v~~~~ 414 (445)
T 2ovr_B 359 -------------------NKHQSAVTCLQFN--KNFVITSSDDGTVKLWDLKTGE---FIRNLVTLESGGSGGVVWRIR 414 (445)
T ss_dssp -------------------TSCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCC---EEEEEEECTTGGGTCEEEEEE
T ss_pred -------------------CCCCCCEEEEEEC--CCEEEEEeCCCeEEEEECCCCc---eeeeeeccccCCCCceEEEEE
Confidence 1366789999995 5688875 59999999988632 333321122111144788899
Q ss_pred EecCCCeEEEEecCCc------EEEecC
Q psy12614 460 ISADSTLLLAVSLNGP------LYIIDL 481 (708)
Q Consensus 460 ~s~d~~~l~~~~~dg~------i~~~~~ 481 (708)
|+|++.++++++.||. +|+++.
T Consensus 415 ~s~~~~~la~~~~dg~~~~~l~v~df~~ 442 (445)
T 2ovr_B 415 ASNTKLVCAVGSRNGTEETKLLVLDFDV 442 (445)
T ss_dssp ECSSEEEEEEECSSSSSCCEEEEEECCC
T ss_pred ecCCEEEEEEcccCCCCccEEEEEECCC
Confidence 9999999999999995 566543
|
| >3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-35 Score=308.88 Aligned_cols=314 Identities=15% Similarity=0.243 Sum_probs=260.5
Q ss_pred eeeccCCCCcE-EEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe-CCEEEEEcCCCcEEEE
Q psy12614 19 IKFYAPEPKVI-NCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF-NDRLFSGGLQGFVNEY 96 (708)
Q Consensus 19 ~~~~~~h~~~v-~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~-~~~l~s~~~d~~i~vw 96 (708)
...+.+|.+.| +|+++ ++++|++|+.||.|++||+.+++.+. .+.+|. +.|.+++|+ +..|++++.||+|++|
T Consensus 114 ~~~l~~h~~~v~~~~~~--~~~~l~sgs~dg~i~vwd~~~~~~~~-~~~~h~--~~V~~l~~~~~~~l~s~s~dg~i~vw 188 (464)
T 3v7d_B 114 RTTLRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSINKKFLL-QLSGHD--GGVWALKYAHGGILVSGSTDRTVRVW 188 (464)
T ss_dssp EEEEECCSSSCEEEEEE--ETTEEEEEETTSCEEEEETTTTEEEE-EECCCS--SCEEEEEECSTTEEEEEETTSCEEEE
T ss_pred eEEEcCCCCCcEEEEEE--CCCEEEEEcCCCcEEEEECCCCcEEE-EEeCCC--cCEEEEEEcCCCEEEEEeCCCCEEEE
Confidence 44678898885 66666 56799999999999999999998876 899999 999999999 6699999999999999
Q ss_pred ECCCCeEeEEEeecCCceEEEEEe--cCCCEEEEEeCCCcEEEEEccCCcEE---------------------EEEeccc
Q psy12614 97 DMRRLNIKSSTAVTSGTCWCLSVH--KKKRLLAAGTEQGHINLFQISDEGLL---------------------YEKLLDR 153 (708)
Q Consensus 97 d~~~~~~~~~~~~~~~~v~~~~~s--~~~~~la~~~~d~~i~iwd~~~~~~~---------------------~~~~~~~ 153 (708)
|+++++++..+.+|.+.|.+++|+ ++++++++++.|+.|++||+.++... ....+.+
T Consensus 189 d~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (464)
T 3v7d_B 189 DIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRG 268 (464)
T ss_dssp ETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECC
T ss_pred ECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccC
Confidence 999999999999999999999999 57889999999999999999876532 1246778
Q ss_pred ccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeC
Q psy12614 154 QQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDG 231 (708)
Q Consensus 154 ~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~ 231 (708)
|...+.++ +++++++++++.| .|++||+.+++.+..+. .|...|.+++|+|++. +++++.||.|++||+
T Consensus 269 ~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~ 339 (464)
T 3v7d_B 269 HMASVRTV--SGHGNIVVSGSYDNTLIVWDVAQMKCLYILS-------GHTDRIYSTIYDHERKRCISASMDTTIRIWDL 339 (464)
T ss_dssp CSSCEEEE--EEETTEEEEEETTSCEEEEETTTTEEEEEEC-------CCSSCEEEEEEETTTTEEEEEETTSCEEEEET
T ss_pred ccceEEEE--cCCCCEEEEEeCCCeEEEEECCCCcEEEEec-------CCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEC
Confidence 88888887 5789999999999 99999999999888875 3388899999999984 999999999999999
Q ss_pred CCCeeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe
Q psy12614 232 KTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH 311 (708)
Q Consensus 232 ~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~ 311 (708)
++++.+..+.+|...|.+++|+ +++|++++.||.|++||+.+ +. ... ...+...+..++++
T Consensus 340 ~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~--------~~--------~~~-~~~~~~~~~~~~~~ 400 (464)
T 3v7d_B 340 ENGELMYTLQGHTALVGLLRLS--DKFLVSAAADGSIRGWDAND--------YS--------RKF-SYHHTNLSAITTFY 400 (464)
T ss_dssp TTTEEEEEECCCSSCEEEEEEC--SSEEEEEETTSEEEEEETTT--------CC--------EEE-EEECTTCCCEEEEE
T ss_pred CCCcEEEEEeCCCCcEEEEEEc--CCEEEEEeCCCcEEEEECCC--------Cc--------eee-eecCCCCccEEEEE
Confidence 9999999999999999999997 47999999999999999998 53 222 22355666777777
Q ss_pred --CCEEEEEcCCCeEEEEeCCCCceee--cCccCCCCceEEEEcCCcEEEEE-cCCeEEEE
Q psy12614 312 --GNRLYSGGLDSYLSLSYYPPKTLVK--YPCTLAQSTPVSLAKDIQHVLLQ-YTSHLELW 367 (708)
Q Consensus 312 --~~~l~s~~~d~~i~iw~~~~~~~~~--~~~~~~~~~~~~~s~~~~~l~~~-~~~~i~i~ 367 (708)
+.++++++ |+.|++||+.++.+.. ...+......++++ +..+++++ .++.+.+|
T Consensus 401 ~~~~~l~~~~-dg~i~iwd~~~g~~~~~~~~~~~~~v~~v~~~-~~~l~~~~~~~g~~~i~ 459 (464)
T 3v7d_B 401 VSDNILVSGS-ENQFNIYNLRSGKLVHANILKDADQIWSVNFK-GKTLVAAVEKDGQSFLE 459 (464)
T ss_dssp ECSSEEEEEE-TTEEEEEETTTCCEEESCTTTTCSEEEEEEEE-TTEEEEEEEETTEEEEE
T ss_pred eCCCEEEEec-CCeEEEEECCCCcEEehhhccCCCcEEEEEec-CCEEEEEEEeCCeEEEE
Confidence 78888887 9999999999887544 23333444566776 33344443 55655444
|
| >2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-38 Score=326.01 Aligned_cols=356 Identities=10% Similarity=0.104 Sum_probs=266.4
Q ss_pred CcEEEEEEe--CC-EEEEE----------cCCCcEEEEECCCCe---EeEEEeecCCceEEEEEecCCCEEEEEeCCCcE
Q psy12614 72 NSIECLTWF--ND-RLFSG----------GLQGFVNEYDMRRLN---IKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHI 135 (708)
Q Consensus 72 ~~v~~l~~~--~~-~l~s~----------~~d~~i~vwd~~~~~---~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i 135 (708)
..|.+++|+ +. +|+++ +.|+.|++||+.++. ++..+ .|...|.+++|+|++++|++++.|+.|
T Consensus 13 ~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~dg~v 91 (416)
T 2pm9_A 13 SRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASL-QVDSKFNDLDWSHNNKIIAGALDNGSL 91 (416)
T ss_dssp EESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCC-CCSSCEEEEEECSSSSCEEEEESSSCE
T ss_pred hhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEE-ecCCceEEEEECCCCCeEEEEccCCeE
Confidence 457788999 55 88898 889999999999876 33333 588999999999999999999999999
Q ss_pred EEEEccC----CcEEEEEecccccccEEEEEECCC-CCEEEEecCC-eEEEEEcCCCc------eEEEEEecccCCCCCc
Q psy12614 136 NLFQISD----EGLLYEKLLDRQQGRILCTAWHSS-GDYLVTGCAA-AVRVWDIHKGH------AIHKMSLDKSSKFSKN 203 (708)
Q Consensus 136 ~iwd~~~----~~~~~~~~~~~~~~~v~~~~~s~d-~~~l~~~~~d-~i~iwd~~~~~------~~~~~~~~~~~~~~~~ 203 (708)
++||+.+ .+.. ..+.+|...|.+++|+|+ +++|++++.| .|++||+.+++ ....+... . .+.
T Consensus 92 ~vw~~~~~~~~~~~~--~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~-~---~~~ 165 (416)
T 2pm9_A 92 ELYSTNEANNAINSM--ARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQS-M---SSV 165 (416)
T ss_dssp EEECCSSTTSCCCEE--EECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCS-C---CSS
T ss_pred EEeecccccccccch--hhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccc-c---CCC
Confidence 9999987 3344 778899999999999998 8999999999 99999999876 33222111 1 347
Q ss_pred eeEEEEEEccC-C-EEEEEcCCCcEEEEeCCCCeeEEEeecc------ccCeEEEEEeCCC-CEEEEEecCC---eEEEE
Q psy12614 204 TAVWCVAFCAD-F-TIITGDSGGFVRFWDGKTGVQWSDVKTH------KKDILALTVSEDE-NYLYCAGVDP---TVVCF 271 (708)
Q Consensus 204 ~~v~~~~~~~~-~-~l~~~~~dg~i~~wd~~~~~~~~~~~~~------~~~i~~~~~s~~~-~~l~~~~~dg---~i~iw 271 (708)
..|.+++|+|+ + .+++++.||.|++||+++++.+..+..+ ...|.+++|+|++ .++++++.|+ .|++|
T Consensus 166 ~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~ 245 (416)
T 2pm9_A 166 DEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIW 245 (416)
T ss_dssp CCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEE
T ss_pred CCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEE
Confidence 88999999998 4 4899999999999999999998888776 7899999999997 6899999998 99999
Q ss_pred EccCCcccccCCCCCCCCcceEEeEEEe-ccccceEEEEEe---CCEEEEEcCCCeEEEEeCCCCceeecCccCCCCceE
Q psy12614 272 QRTRKPQVCSTSGPEQGSSVWVRSVNRV-IHEGDVKSLALH---GNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPV 347 (708)
Q Consensus 272 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~v~~l~~~---~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~ 347 (708)
|+.+ +. .....+. +|...|.+++|+ +.+|++++.|+.|++||+.+..
T Consensus 246 d~~~--------~~-------~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~-------------- 296 (416)
T 2pm9_A 246 DLRN--------AN-------TPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAE-------------- 296 (416)
T ss_dssp ETTS--------TT-------SCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCC--------------
T ss_pred eCCC--------CC-------CCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCc--------------
Confidence 9987 42 0234455 789999999996 7889999999999998875432
Q ss_pred EEEcCCcEEEEEcCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCC-cEEEEEc-CCc
Q psy12614 348 SLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDG-KYVAYST-ESC 425 (708)
Q Consensus 348 ~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g-~~l~~~~-d~~ 425 (708)
.......|...|.+++|+|++ .+|+++. |+.
T Consensus 297 -----------------------------------------------~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~ 329 (416)
T 2pm9_A 297 -----------------------------------------------QLSQFPARGNWCFKTKFAPEAPDLFACASFDNK 329 (416)
T ss_dssp -----------------------------------------------EEEEEECSSSCCCCEEECTTCTTEEEECCSSSE
T ss_pred -----------------------------------------------cceeecCCCCceEEEEECCCCCCEEEEEecCCc
Confidence 222333677889999999999 7888854 999
Q ss_pred eEEEEEEecCCcceeEEeecCCcccccceeEEEEEecCCCeEEEEecCCcEEEecCCCeEEEEEecCCCCCccCcceEEE
Q psy12614 426 VRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVLISADSTLLLAVSLNGPLYIIDLSSLEIKYCVDPYKSNLMSDVISLV 505 (708)
Q Consensus 426 i~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 505 (708)
|++|++........... ... ........+.+.+..++..+..+. +.+ .....+ ...+..+
T Consensus 330 i~iw~~~~~~~~~~~~~---~~~---~~~~~~~~~~~~~~~~~~~~~~~~-~~~-----------~~~~~~--~~~~~~~ 389 (416)
T 2pm9_A 330 IEVQTLQNLTNTLDEQE---TET---KQQESETDFWNNVSREESKEKPSV-FHL-----------QAPTWY--GEPSPAA 389 (416)
T ss_dssp EEEEESCCCCCSSCC----------------------------CCSCCCS-SCC-----------CCCSTT--CCCSCCC
T ss_pred EEEEEccCCCCCccccc---ccc---cccCCccccccccccccccccccc-ccc-----------cCCccc--cCCccce
Confidence 99999987443221111 000 001111334444444442222211 111 223344 6678899
Q ss_pred EECCCCcEEEEEecCCeEEEEECCc
Q psy12614 506 QMSECKQYIVCADRKSHVVIWKNGQ 530 (708)
Q Consensus 506 ~~s~~~~~l~~~~~d~~i~iw~~~~ 530 (708)
+|+|||++||+++.|+.|+||++.+
T Consensus 390 ~~s~dg~~la~~~~d~~v~~w~~~~ 414 (416)
T 2pm9_A 390 HWAFGGKLVQITPDGKGVSITNPKI 414 (416)
T ss_dssp EEETTTEEECBCTTSSCBCCBCCCC
T ss_pred EEeeCCeEEEEeCCCCeEEEEEecc
Confidence 9999999999999999999999863
|
| >3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-36 Score=305.57 Aligned_cols=280 Identities=16% Similarity=0.249 Sum_probs=235.6
Q ss_pred eeeeccCCCCcEEEEEEcCCC-CEEEEEeCCCcEEEEeCCCCCeEEEEEe--cCCCCCcEEEEEEe---CCEEEEEcCCC
Q psy12614 18 NIKFYAPEPKVINCIACEPKS-SRLAVSRADQSIEIWDISETPHVDRVFI--GDPLSNSIECLTWF---NDRLFSGGLQG 91 (708)
Q Consensus 18 ~~~~~~~h~~~v~~~~~s~~~-~~la~~~~dg~v~iwd~~~~~~~~~~~~--~h~~~~~v~~l~~~---~~~l~s~~~d~ 91 (708)
..+.+.+|.+.|++++|+|++ ++||+|+.||.|+|||+.+++... .+. +|. ..|.+++|+ +++|++++.|+
T Consensus 65 ~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~-~~~~~~h~--~~v~~~~~~~~~~~~l~s~~~d~ 141 (383)
T 3ei3_B 65 LHRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTS-FIQGMGPG--DAITGMKFNQFNTNQLFVSSIRG 141 (383)
T ss_dssp EEEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEE-EECCCSTT--CBEEEEEEETTEEEEEEEEETTT
T ss_pred eEEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccce-eeecCCcC--CceeEEEeCCCCCCEEEEEeCCC
Confidence 345678999999999999999 999999999999999999887765 444 688 999999998 58999999999
Q ss_pred cEEEEECCCCeEeEEEeec---CCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCC
Q psy12614 92 FVNEYDMRRLNIKSSTAVT---SGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGD 168 (708)
Q Consensus 92 ~i~vwd~~~~~~~~~~~~~---~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~ 168 (708)
.|++||+.+ .....+..+ ...|.+++|+|++++|++++.|+.|++||+. ++.. ..+..|...|.+++|+|+++
T Consensus 142 ~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~-~~~~--~~~~~h~~~v~~~~~~~~~~ 217 (383)
T 3ei3_B 142 ATTLRDFSG-SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLD-GHEI--FKEKLHKAKVTHAEFNPRCD 217 (383)
T ss_dssp EEEEEETTS-CEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETT-SCEE--EEEECSSSCEEEEEECSSCT
T ss_pred EEEEEECCC-CceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECC-CCEE--EEeccCCCcEEEEEECCCCC
Confidence 999999996 555555544 4789999999999999999999999999995 4444 67888999999999999999
Q ss_pred -EEEEecCC-eEEEEEcCC----CceEEEEEecccCCCCCceeEEEEEEcc-CCE-EEEEcCCCcEEEEeCCCCeeEEEe
Q psy12614 169 -YLVTGCAA-AVRVWDIHK----GHAIHKMSLDKSSKFSKNTAVWCVAFCA-DFT-IITGDSGGFVRFWDGKTGVQWSDV 240 (708)
Q Consensus 169 -~l~~~~~d-~i~iwd~~~----~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~-l~~~~~dg~i~~wd~~~~~~~~~~ 240 (708)
+|++++.| .|++||+.+ +..+..+. +...|.+++|+| ++. +++++.|+.|++||+++++....+
T Consensus 218 ~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~--------~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~ 289 (383)
T 3ei3_B 218 WLMATSSVDATVKLWDLRNIKDKNSYIAEMP--------HEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQI 289 (383)
T ss_dssp TEEEEEETTSEEEEEEGGGCCSTTCEEEEEE--------CSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEE
T ss_pred CEEEEEeCCCEEEEEeCCCCCcccceEEEec--------CCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCcccccc
Confidence 99999999 999999998 55555552 278899999999 885 889999999999999988776666
Q ss_pred eccc-----------------cCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEec--c
Q psy12614 241 KTHK-----------------KDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVI--H 301 (708)
Q Consensus 241 ~~~~-----------------~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~--~ 301 (708)
.+|. ..+..++|+|++++ +++.|+.|++||+.+ ++ ....+.+ |
T Consensus 290 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~--------~~--------~~~~l~~~~~ 351 (383)
T 3ei3_B 290 IIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANS--------GG--------LVHQLRDPNA 351 (383)
T ss_dssp EECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTT--------CC--------EEEEECBTTB
T ss_pred ccccccccccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCC--------Cc--------eeeeecCCCC
Confidence 5443 34445667777766 777899999999998 76 5666666 4
Q ss_pred ccceEEEEEe--CCEEEEEcCCCeEEEEeCCC
Q psy12614 302 EGDVKSLALH--GNRLYSGGLDSYLSLSYYPP 331 (708)
Q Consensus 302 ~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~ 331 (708)
...+..++|+ +.+|++++ |+.|++|++++
T Consensus 352 ~~~~~~~~~s~~g~~l~s~s-d~~i~iw~~~~ 382 (383)
T 3ei3_B 352 AGIISLNKFSPTGDVLASGM-GFNILIWNRED 382 (383)
T ss_dssp CSCCCEEEECTTSSEEEEEE-TTEEEEEECC-
T ss_pred CceEEEEEEecCccEEEEec-CCcEEEEecCC
Confidence 5677888999 88999997 99999999864
|
| >2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-38 Score=328.98 Aligned_cols=338 Identities=13% Similarity=0.114 Sum_probs=245.4
Q ss_pred CCCCcEEEEEEcCCC---------CEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCc
Q psy12614 24 PEPKVINCIACEPKS---------SRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGF 92 (708)
Q Consensus 24 ~h~~~v~~~~~s~~~---------~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~ 92 (708)
.+.+.|.+++|+|++ ++||+|+.++.. . . .+ +..+++++.|++
T Consensus 131 ~~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~------------------~--~------~~~~~~~laS~s~D~t 184 (524)
T 2j04_B 131 NVGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMD------------------E--P------LNEHLEMFDKEKHSSC 184 (524)
T ss_dssp ECCC--CCCSCEEECCCCSSCSSEEEEEEEEEC--------------------------------------------CEE
T ss_pred ECCCceeEEEecccCCCCccCcCCeEEEEEEecccC------------------C--c------cchhhhhhccCCCCce
Confidence 367899999999987 799999866420 0 0 12 567899999999
Q ss_pred EEEEECCCCeEe----EEEeecCCceEEEEEecC------CCEEEEEeCCCcEEEEEccCCcEE---------EEEeccc
Q psy12614 93 VNEYDMRRLNIK----SSTAVTSGTCWCLSVHKK------KRLLAAGTEQGHINLFQISDEGLL---------YEKLLDR 153 (708)
Q Consensus 93 i~vwd~~~~~~~----~~~~~~~~~v~~~~~s~~------~~~la~~~~d~~i~iwd~~~~~~~---------~~~~~~~ 153 (708)
|+|||+.+++.. ..+..|.+.|++++|+|+ +.+||+++.||+|++||+.++... ....+.+
T Consensus 185 I~iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~ 264 (524)
T 2j04_B 185 IQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSL 264 (524)
T ss_dssp EEEEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECC
T ss_pred EEEEEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEc
Confidence 999999887642 446778899999999997 579999999999999999876421 0135678
Q ss_pred ccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCce-EEEEEecccCCCCCceeEEEE--EEccCC-E-EEEEcCCCcEE
Q psy12614 154 QQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHA-IHKMSLDKSSKFSKNTAVWCV--AFCADF-T-IITGDSGGFVR 227 (708)
Q Consensus 154 ~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~v~~~--~~~~~~-~-l~~~~~dg~i~ 227 (708)
|...|.+++|++++ .|++|+.| +|++||++++.. ...+. .|...|.++ +|+|++ + +++++.|++|+
T Consensus 265 h~~~v~sv~~s~~~-~lasgs~DgtV~lWD~~~~~~~~~~~~-------~H~~~V~sv~~~~s~~g~~~laS~S~D~tvk 336 (524)
T 2j04_B 265 ADSLITTFDFLSPT-TVVCGFKNGFVAEFDLTDPEVPSFYDQ-------VHDSYILSVSTAYSDFEDTVVSTVAVDGYFY 336 (524)
T ss_dssp TTTCEEEEEESSSS-EEEEEETTSEEEEEETTBCSSCSEEEE-------CSSSCEEEEEEECCTTSCCEEEEEETTSEEE
T ss_pred CCCCEEEEEecCCC-eEEEEeCCCEEEEEECCCCCCceEEee-------cccccEEEEEEEcCCCCCeEEEEeccCCeEE
Confidence 99999999999865 89999999 999999987743 33343 348889999 578887 5 89999999999
Q ss_pred EEeCCCCeeEEEeecccc--CeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccce
Q psy12614 228 FWDGKTGVQWSDVKTHKK--DILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDV 305 (708)
Q Consensus 228 ~wd~~~~~~~~~~~~~~~--~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v 305 (708)
+||+++++.+..+.+|.. .|.+++|+|+++.+++++.|+.|++||++. +. ....+.+|.+.|
T Consensus 337 lWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~--------~~--------~~~~l~gH~~~V 400 (524)
T 2j04_B 337 IFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRA--------AF--------AVHPLVSRETTI 400 (524)
T ss_dssp EECGGGHHHHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTC--------TT--------CCEEEEECSSCE
T ss_pred EEECCCCCcccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECcc--------cc--------cceeeecCCCce
Confidence 999998887777766653 588999999999999999999999999988 65 446677899999
Q ss_pred EEEEEe--CCEEEEEcCCCeEEEEeCCCCceeecCccC--C---CCceEEEEcCCcEEEEEcCCeEEEEEecCCCCCCCC
Q psy12614 306 KSLALH--GNRLYSGGLDSYLSLSYYPPKTLVKYPCTL--A---QSTPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLS 378 (708)
Q Consensus 306 ~~l~~~--~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~--~---~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~ 378 (708)
.+++|+ +..|++|+.|++|++|++....+....... . ....++++|+++.+....+ ..+|....
T Consensus 401 ~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~~~~~~~--~~~~~~~~------- 471 (524)
T 2j04_B 401 TAIGVSRLHPMVLAGSADGSLIITNAARRLLHGIKNSSATQKSLRLWKWDYSIKDDKYRIDSS--YEVYPLTV------- 471 (524)
T ss_dssp EEEECCSSCCBCEEEETTTEEECCBSCSSTTTCC------CCCCEEEECBCCSSSCEEEECCC--CCCCC----------
T ss_pred EEEEeCCCCCeEEEEECCCEEEEEechHhhccccccCccceeeeEEEEeccCCCCCeEEccCC--ceeccccc-------
Confidence 999999 889999999999999998765433221000 0 1236788899885533222 22222210
Q ss_pred CCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCc---EEEEEc-CCceEEEEEEe
Q psy12614 379 SHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGK---YVAYST-ESCVRLHSLDL 433 (708)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~---~l~~~~-d~~i~i~~~~~ 433 (708)
.........+|...|.+++|+|++. ++|+|. +|.|+||++..
T Consensus 472 -------------~g~~~~~l~gh~~~V~~Vafsp~~~~~~~lAsg~~~g~vrlw~l~~ 517 (524)
T 2j04_B 472 -------------NDVSKAKIDAHGINITCTKWNETSAGGKCYAFSNSAGLLTLEYLSL 517 (524)
T ss_dssp -----------------------CCCSCCCEEECCSTTTTTEEEEECTTSEEEEEECSC
T ss_pred -------------CCcceeeecCCCceEEEEECCCCCCccHHHHhhccCceEEEEEccc
Confidence 0123444557889999999999964 999977 89999999874
|
| >2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-36 Score=294.95 Aligned_cols=246 Identities=15% Similarity=0.234 Sum_probs=211.4
Q ss_pred eeccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCC--CeEEEEEecCCCCCcEEEEEEe----CCEEEEEcCCCcE
Q psy12614 20 KFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISET--PHVDRVFIGDPLSNSIECLTWF----NDRLFSGGLQGFV 93 (708)
Q Consensus 20 ~~~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~--~~~~~~~~~h~~~~~v~~l~~~----~~~l~s~~~d~~i 93 (708)
.++.+|.+.|++++|+|+|++||+|+.|++|+|||+.++ +.+. .+.+|. ++|.+++|+ +++|++++.|++|
T Consensus 3 ~~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~-~l~gH~--~~V~~v~~s~~~~g~~l~s~s~D~~v 79 (297)
T 2pm7_B 3 VIANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLID-TLTGHE--GPVWRVDWAHPKFGTILASCSYDGKV 79 (297)
T ss_dssp EECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCE-EECCCS--SCEEEEEECCGGGCSEEEEEETTTEE
T ss_pred eeccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEE-EEcccc--CCeEEEEecCCCcCCEEEEEcCCCEE
Confidence 467899999999999999999999999999999999753 4444 899999 999999996 6899999999999
Q ss_pred EEEECCCCe--EeEEEeecCCceEEEEEecC--CCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCC---
Q psy12614 94 NEYDMRRLN--IKSSTAVTSGTCWCLSVHKK--KRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSS--- 166 (708)
Q Consensus 94 ~vwd~~~~~--~~~~~~~~~~~v~~~~~s~~--~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d--- 166 (708)
++||+++++ .+..+.+|...|.+++|+|+ +.+|++++.|+.|++||+.++.......+.+|...|.+++|+|+
T Consensus 80 ~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~ 159 (297)
T 2pm7_B 80 MIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIE 159 (297)
T ss_dssp EEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC--
T ss_pred EEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCccc
Confidence 999999874 56678889999999999998 88999999999999999987642212467789999999999997
Q ss_pred ----------CCEEEEecCC-eEEEEEcCCCce----EEEEEecccCCCCCceeEEEEEEccCC---E-EEEEcCCCcEE
Q psy12614 167 ----------GDYLVTGCAA-AVRVWDIHKGHA----IHKMSLDKSSKFSKNTAVWCVAFCADF---T-IITGDSGGFVR 227 (708)
Q Consensus 167 ----------~~~l~~~~~d-~i~iwd~~~~~~----~~~~~~~~~~~~~~~~~v~~~~~~~~~---~-l~~~~~dg~i~ 227 (708)
+++|++++.| .|++||+.+++. ...+. +|...|.+++|+|++ . +++++.|+.|+
T Consensus 160 ~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~-------~H~~~V~~v~~sp~~~~~~~las~s~D~~v~ 232 (297)
T 2pm7_B 160 EDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLE-------GHSDWVRDVAWSPTVLLRSYMASVSQDRTCI 232 (297)
T ss_dssp ----------CCEEEEEETTSCEEEEEEETTTTEEEEEEEEC-------CCSSCEEEEEECCCCSSSEEEEEEETTSCEE
T ss_pred ccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEec-------CCCCceEEEEECCCCCCceEEEEEECCCcEE
Confidence 5799999999 999999988763 33332 448899999999984 4 89999999999
Q ss_pred EEeCCCCe---eEEEe--eccccCeEEEEEeCCCCEEEEEecCCeEEEEEccC
Q psy12614 228 FWDGKTGV---QWSDV--KTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTR 275 (708)
Q Consensus 228 ~wd~~~~~---~~~~~--~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~ 275 (708)
+||++++. ....+ ..|...|.+++|+|++++|++++.|+.|++|+...
T Consensus 233 iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~~ 285 (297)
T 2pm7_B 233 IWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 285 (297)
T ss_dssp EEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEECT
T ss_pred EEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEECC
Confidence 99987643 12233 46788999999999999999999999999999874
|
| >1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-35 Score=336.07 Aligned_cols=504 Identities=10% Similarity=0.068 Sum_probs=365.3
Q ss_pred CCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCC------CcEEEE
Q psy12614 25 EPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQ------GFVNEY 96 (708)
Q Consensus 25 h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d------~~i~vw 96 (708)
+.+.+.+.+||| ++||.++. +.|.+|++.+++. ..+.+|. ..+.+++|| |++|++++.+ ..|.+|
T Consensus 13 ~~~~~~~~~~S~--~~iaf~~~-~~l~~~~~~gg~~--~~lt~~~--~~v~~~~~SPDG~~la~~s~~~~~~~~~~i~~~ 85 (1045)
T 1k32_A 13 MPNLLLNPDIHG--DRIIFVCC-DDLWEHDLKSGST--RKIVSNL--GVINNARFFPDGRKIAIRVMRGSSLNTADLYFY 85 (1045)
T ss_dssp CCCCCEEEEEET--TEEEEEET-TEEEEEETTTCCE--EEEECSS--SEEEEEEECTTSSEEEEEEEESTTCCEEEEEEE
T ss_pred ccceEeCcEEeC--CEEEEEEC-CcEEEEECCCCcE--EEeeeCC--CcccCeEECCCCCEEEEEEeeccCCCCCeEEEE
Confidence 567899999996 58888875 6999999988775 3678898 999999999 8999987543 479999
Q ss_pred ECCCCeEeEEEeecCCce-------EEEEEecCCCEEEEEeCC------CcEEEEEccCCcEEEEEecccccccEEEEEE
Q psy12614 97 DMRRLNIKSSTAVTSGTC-------WCLSVHKKKRLLAAGTEQ------GHINLFQISDEGLLYEKLLDRQQGRILCTAW 163 (708)
Q Consensus 97 d~~~~~~~~~~~~~~~~v-------~~~~~s~~~~~la~~~~d------~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~ 163 (708)
|+.+++ ...+..|...+ .+++|+|||+++++++.+ ..|++|++.+++.. .+..+. ...++|
T Consensus 86 d~~~g~-~~~lt~~~~~~~~~~~~~~~~~~SpDg~ll~~~~~~~~~~~~~~l~~~~~~~g~~~---~l~~~~--~~~~~~ 159 (1045)
T 1k32_A 86 NGENGE-IKRITYFSGKSTGRRMFTDVAGFDPDGNLIISTDAMQPFSSMTCLYRVENDGINFV---PLNLGP--ATHILF 159 (1045)
T ss_dssp ETTTTE-EEECCCCCEEEETTEECSEEEEECTTCCEEEEECTTSSSTTCCEEEEEEGGGTEEE---ECCSCS--CSEEEE
T ss_pred ECCCCC-eEEcccCCCcccccccccccccCCCCCEEEEEECCcCCCcccceEEEEECCCCCeE---EecCCC--cceeee
Confidence 999887 56778888888 999999999977776644 45888888888763 333332 346779
Q ss_pred CCCCCEEEEecC------------C-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEEEEcCCCcEEEEe
Q psy12614 164 HSSGDYLVTGCA------------A-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWD 230 (708)
Q Consensus 164 s~d~~~l~~~~~------------d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~wd 230 (708)
+| | ++++++. + ...+|....+.....+. .+...+.++.|+++..+++++.++.+.+|.
T Consensus 160 sp-G-~l~~~~~~~~~~~~~~~~g~~~~~lw~~~~~~~~~~l~-------~~~~~v~~~~~s~d~l~~~~~~dg~~~l~~ 230 (1045)
T 1k32_A 160 AD-G-RRVIGRNTFELPHWKGYRGGTRGKIWIEVNSGAFKKIV-------DMSTHVSSPVIVGHRIYFITDIDGFGQIYS 230 (1045)
T ss_dssp ET-T-EEEEEESCSCCTTSTTCCSTTCCEEEEEEETTEEEEEE-------CCSSCCEEEEEETTEEEEEECTTSSCEEEE
T ss_pred CC-C-EEEEeccCCCccccccccCCCcCCEEEECCCCCeEECc-------CCCCcccceEEeCCEEEEEEeccCceEEEE
Confidence 99 8 8887642 2 45666544434444452 347889999999994466778889888887
Q ss_pred CCC-CeeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEe----------
Q psy12614 231 GKT-GVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRV---------- 299 (708)
Q Consensus 231 ~~~-~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~---------- 299 (708)
+.. +.....+..|. .+...+|+|||++|+++ .++.|++|++.. .. ...+.
T Consensus 231 ~~~~g~~~~~l~~~~-~~~~~~~SpDG~~la~~-~~~~i~~~d~~~--------~~---------l~~l~~~~~~~~~~~ 291 (1045)
T 1k32_A 231 TDLDGKDLRKHTSFT-DYYPRHLNTDGRRILFS-KGGSIYIFNPDT--------EK---------IEKIEIGDLESPEDR 291 (1045)
T ss_dssp EETTSCSCEECCCCC-SSCEEEEEESSSCEEEE-ETTEEEEECTTT--------CC---------EEECCCCCCCBCCSE
T ss_pred EeCCCCcceEecCCC-CcceeeEcCCCCEEEEE-eCCEEEEecCCc--------eE---------eeeeccCcccccccc
Confidence 643 44445555554 46678999999999887 489999999854 21 11222
Q ss_pred -ccccceEEEEEe---CCEEEEEcCCCeEEEEeCCCCceeecCccCC-CCceEEEEcCCcEEEEE-cCCeEE-EEEecCC
Q psy12614 300 -IHEGDVKSLALH---GNRLYSGGLDSYLSLSYYPPKTLVKYPCTLA-QSTPVSLAKDIQHVLLQ-YTSHLE-LWSLGSA 372 (708)
Q Consensus 300 -~~~~~v~~l~~~---~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~-~~~~~~~s~~~~~l~~~-~~~~i~-i~~~~~~ 372 (708)
.|...+.+++|+ +..|++++ ++.+.+|++.+.....+..+.. ....++|+ ||+.++.. .+..+. +|+...+
T Consensus 292 ~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~ 369 (1045)
T 1k32_A 292 IISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVLKVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTG 369 (1045)
T ss_dssp EEECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEEECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTC
T ss_pred cccccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceEEccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCC
Confidence 245578888887 56777776 8899999998887666653444 45678899 99888875 455677 7787664
Q ss_pred CCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEEE-cCCceEEEEEEecCCcceeEEeecCCcccc
Q psy12614 373 QSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYS-TESCVRLHSLDLDGDKPQISRIKNLPAPLF 451 (708)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~ 451 (708)
. ...+. .+...+..++|+|||++|+++ .++.|++||+.+ +.. ..+ +.+|..
T Consensus 370 ~---------------------~~~l~-~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~t--g~~--~~~--~~~~~~ 421 (1045)
T 1k32_A 370 K---------------------AEKFE-ENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLET--GKP--TVI--ERSREA 421 (1045)
T ss_dssp C---------------------EEECC-CCCCSEEEEEECTTSSEEEEEETTSEEEEEETTT--CCE--EEE--EECSSS
T ss_pred C---------------------ceEec-CCccceeeeEECCCCCEEEEECCCCeEEEEECCC--Cce--EEe--ccCCCC
Confidence 3 22333 566789999999999999985 489999999976 321 111 223433
Q ss_pred cceeEEEEEecCCCeEEEEecCC----------c--EEEecCCCeEEEEEecCCCCCccCcceEEEEECCCCcEEEEEec
Q psy12614 452 KSIFTHVLISADSTLLLAVSLNG----------P--LYIIDLSSLEIKYCVDPYKSNLMSDVISLVQMSECKQYIVCADR 519 (708)
Q Consensus 452 ~~~i~~~~~s~d~~~l~~~~~dg----------~--i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~ 519 (708)
.+.+++|||||++|++++.++ . +|++..+ + +..+. .+ ...+..++|+|||++|++++.
T Consensus 422 --~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g--~-~~~l~---~~--~~~~~~~~~spdG~~l~~~s~ 491 (1045)
T 1k32_A 422 --MITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGR--K-IFAAT---TE--NSHDYAPAFDADSKNLYYLSY 491 (1045)
T ss_dssp --CCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTT--E-EEECS---CS--SSBEEEEEECTTSCEEEEEES
T ss_pred --CccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCC--c-EEEee---CC--CcccCCceEcCCCCEEEEEec
Confidence 445599999999999887754 3 6666655 3 33333 33 557888999999999999988
Q ss_pred CCeEEEEECCc---------------------------------------------eeeecCCCCCCceEEEEcCCCCEE
Q psy12614 520 KSHVVIWKNGQ---------------------------------------------HHASLPRYRKPSTAMAIHPTLSTL 554 (708)
Q Consensus 520 d~~i~iw~~~~---------------------------------------------~~~~~~~~~~~v~~l~~s~d~~~l 554 (708)
++...+|+... ....++.|...+..++|+||++++
T Consensus 492 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~l~~~~~~~~~~~~s~dg~~~ 571 (1045)
T 1k32_A 492 RSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILI 571 (1045)
T ss_dssp CCCCCEECSSSSCEECCSCBEEEEEESSTTCCCGGGCCCGGGSCCCCCCCCTTGGGGCEECSCCCBCEEEEEECSSEEEE
T ss_pred ccCCcCcchhccccccccCceeEEEEeCCCCCCccccCcCccccccccccccCHhHceEEcCCCCCChhheEEcCCCeEE
Confidence 77666665320 112445567788999999999878
Q ss_pred EE-------------EecCCcEEEEEcCCCCCCchhhhhhccCchhhhcCCCCeeEEEeCCCCCceEEEEcCeeEEEEec
Q psy12614 555 VT-------------VYSDHRIVEFDLNRKAFTTFSRKLETNHPNEWLSRQLPVLGIEFDPQDSSLIYLMDDSALCVINK 621 (708)
Q Consensus 555 ~~-------------~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~~~~l~~~~~d~~i~~wd~ 621 (708)
++ ...+..|++||+.+++.. .+. ..+.+++|||||++|++++.+ .|++||+
T Consensus 572 ~~~~~~g~~~~~~~~~~~~~~l~~~d~~~~~~~------------~l~---~~v~~~~~S~DG~~l~~~~~~-~i~~~d~ 635 (1045)
T 1k32_A 572 YSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKVT------------EVK---NNLTDLRLSADRKTVMVRKDD-GKIYTFP 635 (1045)
T ss_dssp EECCCCCSHHHHHHCCCCCEEEEEEETTTCCEE------------EEE---EEEEEEEECTTSCEEEEEETT-SCEEEEE
T ss_pred EEecccCcccccccccCCCceEEEEECCCCcEE------------Eee---cCcceEEECCCCCEEEEEcCC-cEEEEeC
Confidence 75 123457888999887643 111 568899999999999999877 7999999
Q ss_pred CCCC
Q psy12614 622 NKSL 625 (708)
Q Consensus 622 ~~~~ 625 (708)
....
T Consensus 636 ~~~~ 639 (1045)
T 1k32_A 636 LEKP 639 (1045)
T ss_dssp SSCT
T ss_pred ccCc
Confidence 7654
|
| >3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-37 Score=318.80 Aligned_cols=344 Identities=14% Similarity=0.165 Sum_probs=260.3
Q ss_pred eeeeeeec-cCCCCcEEEEEEcC-CCCEEEEEeCCCcEEEEeCCC---CCeEE-EEEecCCCCCcEEEEEEe--CCEEEE
Q psy12614 15 GVHNIKFY-APEPKVINCIACEP-KSSRLAVSRADQSIEIWDISE---TPHVD-RVFIGDPLSNSIECLTWF--NDRLFS 86 (708)
Q Consensus 15 ~~~~~~~~-~~h~~~v~~~~~s~-~~~~la~~~~dg~v~iwd~~~---~~~~~-~~~~~h~~~~~v~~l~~~--~~~l~s 86 (708)
....+..+ .+|.+.|++++|+| ++++||+|+.||.|+|||+.+ +.... ....+|. ..|.+++|+ +++|++
T Consensus 51 ~g~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~--~~v~~~~~~~~~~~l~s 128 (437)
T 3gre_A 51 RGKLIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCS--STVTQITMIPNFDAFAV 128 (437)
T ss_dssp CCCEEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECS--SCEEEEEECTTSSEEEE
T ss_pred cceEEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeeccCC--CCEEEEEEeCCCCEEEE
Confidence 33444555 89999999999999 999999999999999999976 43211 1222588 999999999 889999
Q ss_pred EcCCCcEEEEECC---CCeEeEEEee------------cCCceEEEE--EecCCCEEEEEeCCCcEEEEEccCCcEEEEE
Q psy12614 87 GGLQGFVNEYDMR---RLNIKSSTAV------------TSGTCWCLS--VHKKKRLLAAGTEQGHINLFQISDEGLLYEK 149 (708)
Q Consensus 87 ~~~d~~i~vwd~~---~~~~~~~~~~------------~~~~v~~~~--~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~ 149 (708)
++.||+|++||++ +++....+.. +...+.++. +++++.+|++++.|+.|++||+.+++.. .
T Consensus 129 ~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~--~ 206 (437)
T 3gre_A 129 SSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERL--Q 206 (437)
T ss_dssp EETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEE--E
T ss_pred EeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeee--E
Confidence 9999999999995 5555444433 445566666 5578999999999999999999999887 5
Q ss_pred eccc--ccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEcc----CCE-EEEEc
Q psy12614 150 LLDR--QQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCA----DFT-IITGD 221 (708)
Q Consensus 150 ~~~~--~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~----~~~-l~~~~ 221 (708)
.+.. |.+.|.+++|+|++++|++++.| .|++||+++++.+..+...+ ...|.+++|+| ++. +++++
T Consensus 207 ~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~------~~~v~~~~~~~~~s~~~~~l~s~~ 280 (437)
T 3gre_A 207 IIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGD------HAPITHVEVCQFYGKNSVIVVGGS 280 (437)
T ss_dssp EEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTT------CEEEEEEEECTTTCTTEEEEEEES
T ss_pred EEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCC------CCceEEEEeccccCCCccEEEEEc
Confidence 5655 88999999999999999999999 99999999999988876532 67899996664 564 88999
Q ss_pred CCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEe--
Q psy12614 222 SGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRV-- 299 (708)
Q Consensus 222 ~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~-- 299 (708)
.||.|++||+++++.+..+.+|...+..+.|+|+++.+ .. . .+.
T Consensus 281 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--------------~~--------~------------~~~~~ 326 (437)
T 3gre_A 281 SKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGL--------------EE--------L------------NFCGI 326 (437)
T ss_dssp TTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSG--------------GG--------C------------CCCCC
T ss_pred CCCcEEEEEcCCCcEEEEEEcCCCCCccceeccccccc--------------cc--------c------------eeccc
Confidence 99999999999999999999999999989999987655 11 0 022
Q ss_pred ccccceEEEEEe-CCEEEEEcCCCeEEEEeCCCCcee-ecCccCCC---CceEEEEcCCcEEEEEcCCeEEEEEecCCCC
Q psy12614 300 IHEGDVKSLALH-GNRLYSGGLDSYLSLSYYPPKTLV-KYPCTLAQ---STPVSLAKDIQHVLLQYTSHLELWSLGSAQS 374 (708)
Q Consensus 300 ~~~~~v~~l~~~-~~~l~s~~~d~~i~iw~~~~~~~~-~~~~~~~~---~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~ 374 (708)
.|...|.+++|+ +.+|++++.|+.|++||+.+.... .+..+... .....++++..+++.. |+....
T Consensus 327 ~~~~~v~~l~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~-- 397 (437)
T 3gre_A 327 RSLNALSTISVSNDKILLTDEATSSIVMFSLNELSSSKAVISPSRFSDVFIPTQVTANLTMLLRK-------MKRTST-- 397 (437)
T ss_dssp CSGGGGCCEEEETTEEEEEEGGGTEEEEEETTCGGGCEEEECC--CCCEEEEEEEETTEEEEEEE-------CC------
T ss_pred ccCCceEEEEECCceEEEecCCCCeEEEEECCCcccceEEecccccCceEEEEEeecceEEEEEe-------cccccc--
Confidence 388899999999 779999999999999999887632 22211111 1223334443333322 111111
Q ss_pred CCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCC--CcEEEEEc-CCceEEEE
Q psy12614 375 TDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSND--GKYVAYST-ESCVRLHS 430 (708)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~--g~~l~~~~-d~~i~i~~ 430 (708)
........|...|.+++++++ +.+|++++ ||.|+||+
T Consensus 398 -------------------~~~~~~~~h~~~I~~i~~~~~~~~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 398 -------------------HSVDDSLYHHDIINSISTCEVDETPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp ----------------------------CCCEEEEEEEESSSSEEEEEEETTSCEEEEC
T ss_pred -------------------cccCcccccccceeeEeeeccCCceEEEEEcCCceEEEeC
Confidence 122333468899999999988 77888865 99999994
|
| >4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-35 Score=297.38 Aligned_cols=280 Identities=12% Similarity=0.094 Sum_probs=227.5
Q ss_pred CcEEEEEEcCCCCEEEEEeCCC-------cEEEEeCCCCCe---------EEEEEecCCCCCcEEEEEEeCCEEEEEc--
Q psy12614 27 KVINCIACEPKSSRLAVSRADQ-------SIEIWDISETPH---------VDRVFIGDPLSNSIECLTWFNDRLFSGG-- 88 (708)
Q Consensus 27 ~~v~~~~~s~~~~~la~~~~dg-------~v~iwd~~~~~~---------~~~~~~~h~~~~~v~~l~~~~~~l~s~~-- 88 (708)
-+|.|++|+||+++||+|+.+. .|+||++..+.. ....+.+|. ..|.+++++++.++++.
T Consensus 15 ~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~--~~v~s~~~~~~~~~~g~~~ 92 (365)
T 4h5i_A 15 YPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDND--DSPTAIDASKGIILVGCNE 92 (365)
T ss_dssp SCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTS--CCCCEEEEETTEEEEECCC
T ss_pred CCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCC--CceEEEEeCCCEEEEEECC
Confidence 4699999999999999997543 499999976432 123567888 89999999988877764
Q ss_pred ---------CCCcEEEEECCCCeEe-E---EE-----eecCCceEEEEEecCCCEEEEEe--CCCcEEEEEccCCcEEEE
Q psy12614 89 ---------LQGFVNEYDMRRLNIK-S---ST-----AVTSGTCWCLSVHKKKRLLAAGT--EQGHINLFQISDEGLLYE 148 (708)
Q Consensus 89 ---------~d~~i~vwd~~~~~~~-~---~~-----~~~~~~v~~~~~s~~~~~la~~~--~d~~i~iwd~~~~~~~~~ 148 (708)
.|+.+++|++.+.... . .. ..+...+.+++|||||++||+++ .|++|++||+.+++.+
T Consensus 93 ~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~-- 170 (365)
T 4h5i_A 93 NSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEK-- 170 (365)
T ss_dssp CHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEE--
T ss_pred CccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEE--
Confidence 4778999998764321 1 11 12345689999999999987654 6899999999999886
Q ss_pred EecccccccEEEEEECCCCCEEEEecCCeEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCC---
Q psy12614 149 KLLDRQQGRILCTAWHSSGDYLVTGCAAAVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGG--- 224 (708)
Q Consensus 149 ~~~~~~~~~v~~~~~s~d~~~l~~~~~d~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg--- 224 (708)
..+ .|.+.|.+++|+|||++|++++.+.+.+|+..+++.+...... .+...+.+++|+|+++ +++++.++
T Consensus 171 ~~~-~~~~~V~~v~fspdg~~l~s~s~~~~~~~~~~~~~~~~~~~~~-----~~~~~v~~v~fspdg~~l~~~s~d~~~~ 244 (365)
T 4h5i_A 171 FEI-ETRGEVKDLHFSTDGKVVAYITGSSLEVISTVTGSCIARKTDF-----DKNWSLSKINFIADDTVLIAASLKKGKG 244 (365)
T ss_dssp EEE-ECSSCCCEEEECTTSSEEEEECSSCEEEEETTTCCEEEEECCC-----CTTEEEEEEEEEETTEEEEEEEESSSCC
T ss_pred EEe-CCCCceEEEEEccCCceEEeccceeEEEEEeccCcceeeeecC-----CCCCCEEEEEEcCCCCEEEEEecCCcce
Confidence 344 3778899999999999999999778888888888877655433 4588999999999996 77777776
Q ss_pred -cEEEEeCCCCee----EEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEE-E
Q psy12614 225 -FVRFWDGKTGVQ----WSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVN-R 298 (708)
Q Consensus 225 -~i~~wd~~~~~~----~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~-~ 298 (708)
.++.|++..+.. ...+.+|...|++++|+|||++||+|+.|+.|++||+.+ ++ .... +
T Consensus 245 ~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~--------~~--------~~~~~~ 308 (365)
T 4h5i_A 245 IVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKD--------LS--------MSKIFK 308 (365)
T ss_dssp EEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTT--------TE--------EEEEET
T ss_pred eEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCC--------Cc--------EEEEec
Confidence 588899876643 345678999999999999999999999999999999998 65 4555 4
Q ss_pred eccccceEEEEEe--CCEEEEEcCCCeEEEEeCCCC
Q psy12614 299 VIHEGDVKSLALH--GNRLYSGGLDSYLSLSYYPPK 332 (708)
Q Consensus 299 ~~~~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~~ 332 (708)
.+|...|++++|+ +.+|++++.|++|+||++...
T Consensus 309 ~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 309 QAHSFAITEVTISPDSTYVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp TSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCTT
T ss_pred CcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCCC
Confidence 7899999999999 899999999999999999654
|
| >3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-36 Score=306.80 Aligned_cols=300 Identities=12% Similarity=0.144 Sum_probs=243.9
Q ss_pred eccCCCCcEEEEEEcCCCCEE-EEEeC---CCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe-C----CEEEEEcCCC
Q psy12614 21 FYAPEPKVINCIACEPKSSRL-AVSRA---DQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF-N----DRLFSGGLQG 91 (708)
Q Consensus 21 ~~~~h~~~v~~~~~s~~~~~l-a~~~~---dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~-~----~~l~s~~~d~ 91 (708)
++.+|.+.|++++|+|+++.+ ++|+. ||.|+|||+.+++.......+|. ..|.+++|+ . ++|++++.||
T Consensus 13 ~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~~~~l~~~~~dg 90 (357)
T 3i2n_A 13 IQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKA--KPIKCGTFGATSLQQRYLATGDFGG 90 (357)
T ss_dssp EEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEES--SCEEEEECTTCCTTTCCEEEEETTS
T ss_pred hccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeeccc--CcEEEEEEcCCCCCCceEEEecCCC
Confidence 557899999999999999655 56655 89999999999887664556888 999999999 3 8999999999
Q ss_pred cEEEEECCCCe-EeEEEeecCCceEEEE------EecCCCEEEEEeCCCcEEEEEccCCc-EEEEEecccccc----cEE
Q psy12614 92 FVNEYDMRRLN-IKSSTAVTSGTCWCLS------VHKKKRLLAAGTEQGHINLFQISDEG-LLYEKLLDRQQG----RIL 159 (708)
Q Consensus 92 ~i~vwd~~~~~-~~~~~~~~~~~v~~~~------~s~~~~~la~~~~d~~i~iwd~~~~~-~~~~~~~~~~~~----~v~ 159 (708)
.|++||+.+++ ++..+.+|...|.+++ |+|++++|++++.|+.|++||+.+++ .. ..+..|.+ .+.
T Consensus 91 ~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~--~~~~~~~~~~~~~v~ 168 (357)
T 3i2n_A 91 NLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPV--ANMEPVQGENKRDCW 168 (357)
T ss_dssp CEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCS--EEECCCTTSCCCCEE
T ss_pred eEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcc--eeccccCCCCCCceE
Confidence 99999999988 8899999999999995 46899999999999999999999876 33 44444433 788
Q ss_pred EEE----ECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEcc---CCE-EEEEcCCCcEEEEe
Q psy12614 160 CTA----WHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCA---DFT-IITGDSGGFVRFWD 230 (708)
Q Consensus 160 ~~~----~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~~-l~~~~~dg~i~~wd 230 (708)
+++ |+|++++|++++.+ .|++||+++++..... .+...+.+++|+| ++. +++++.||.|++||
T Consensus 169 ~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~--------~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d 240 (357)
T 3i2n_A 169 TVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWET--------NIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFD 240 (357)
T ss_dssp EEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEEE--------ECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEE
T ss_pred EEEEEeccCCCCCEEEEEccCCeEEEEECccCceeeec--------CCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEe
Confidence 998 78999999999999 9999999998875543 2378899999999 774 89999999999999
Q ss_pred CCCCeeEEEee-----ccccCeEEEEEeCCCC-EEEEEecCCeEEEEEccCCcccccCC--CCC-CCCcceEEeEEEecc
Q psy12614 231 GKTGVQWSDVK-----THKKDILALTVSEDEN-YLYCAGVDPTVVCFQRTRKPQVCSTS--GPE-QGSSVWVRSVNRVIH 301 (708)
Q Consensus 231 ~~~~~~~~~~~-----~~~~~i~~~~~s~~~~-~l~~~~~dg~i~iw~~~~~~~~~~~~--g~~-~~~~~~~~~~~~~~~ 301 (708)
+++++....+. +|...|.+++|+|+++ +|++++.||.|++||+.......... +.. .....+.....+.+|
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 320 (357)
T 3i2n_A 241 MRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLS 320 (357)
T ss_dssp EEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECC
T ss_pred CcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccC
Confidence 98876554443 8999999999999998 89999999999999998721111000 000 001123467788899
Q ss_pred ccceEEEEEe--CCEEE-EEcCCCeEEEEeCCCC
Q psy12614 302 EGDVKSLALH--GNRLY-SGGLDSYLSLSYYPPK 332 (708)
Q Consensus 302 ~~~v~~l~~~--~~~l~-s~~~d~~i~iw~~~~~ 332 (708)
...|.+++|+ +.+|+ +++.|+.|++|++.+.
T Consensus 321 ~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~ 354 (357)
T 3i2n_A 321 TQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTKL 354 (357)
T ss_dssp SSCEEEEEECSSSTTEEEEEETTSEEEEEEECC-
T ss_pred CCCeeEEEEcCCCCeEEEEecCCCcEEEEECCCc
Confidence 9999999999 77787 8999999999998754
|
| >3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-36 Score=305.98 Aligned_cols=292 Identities=10% Similarity=0.150 Sum_probs=244.6
Q ss_pred eeccCCCCcEEEEEEcCC----CCEEEEEeCCCcEEEEeCCCCCeEEEEEec-----CCCCCcEEEEEEe-C-----CEE
Q psy12614 20 KFYAPEPKVINCIACEPK----SSRLAVSRADQSIEIWDISETPHVDRVFIG-----DPLSNSIECLTWF-N-----DRL 84 (708)
Q Consensus 20 ~~~~~h~~~v~~~~~s~~----~~~la~~~~dg~v~iwd~~~~~~~~~~~~~-----h~~~~~v~~l~~~-~-----~~l 84 (708)
.+..+|.+.|++++|+|+ ...+++++.++.|+|||+.+++.+. .+.. |. ..|.+++|+ . .+|
T Consensus 12 ~~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~-~~~~~~~~~~~--~~v~~~~~~~~~~~~~~~l 88 (366)
T 3k26_A 12 SLKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIR-LLQSYVDADAD--ENFYTCAWTYDSNTSHPLL 88 (366)
T ss_dssp EEECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEE-EEEEEECSCTT--CCEEEEEEEECTTTCCEEE
T ss_pred EeecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEE-eeeeccccCCC--CcEEEEEeccCCCCCCCEE
Confidence 466799999999999984 4556666667799999999877654 4443 44 789999999 2 489
Q ss_pred EEEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEec-CCCEEEEEeCCCcEEEEEccCCcEEEEEec---ccccccEEE
Q psy12614 85 FSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHK-KKRLLAAGTEQGHINLFQISDEGLLYEKLL---DRQQGRILC 160 (708)
Q Consensus 85 ~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~-~~~~la~~~~d~~i~iwd~~~~~~~~~~~~---~~~~~~v~~ 160 (708)
++++.||.|++||+.+++.+..+.+|...|.+++|+| ++++|++++.||.|++||+.+++.. ..+ ..|...|.+
T Consensus 89 ~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~--~~~~~~~~~~~~v~~ 166 (366)
T 3k26_A 89 AVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLV--AIFGGVEGHRDEVLS 166 (366)
T ss_dssp EEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEE--EEECSTTSCSSCEEE
T ss_pred EEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEE--EEecccccccCceeE
Confidence 9999999999999999999999999999999999999 9999999999999999999998876 444 689999999
Q ss_pred EEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecc----------------------cCCCCCceeEEEEEEccCCEE
Q psy12614 161 TAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDK----------------------SSKFSKNTAVWCVAFCADFTI 217 (708)
Q Consensus 161 ~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~----------------------~~~~~~~~~v~~~~~~~~~~l 217 (708)
++|+|++++|++++.| .|++||+.+++....+.... ... .+...|.+++|+ ...+
T Consensus 167 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~-~~~l 244 (366)
T 3k26_A 167 ADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRD-IHRNYVDCVRWL-GDLI 244 (366)
T ss_dssp EEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECS-SCSSCCCEEEEE-TTEE
T ss_pred EEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCcccccc-CCcceEEEEEEc-CCEE
Confidence 9999999999999999 99999998776443222100 000 247889999999 4479
Q ss_pred EEEcCCCcEEEEeCCCCee--------------EEEeeccccCeEEEEEeCC--CCEEEEEecCCeEEEEEccCCccccc
Q psy12614 218 ITGDSGGFVRFWDGKTGVQ--------------WSDVKTHKKDILALTVSED--ENYLYCAGVDPTVVCFQRTRKPQVCS 281 (708)
Q Consensus 218 ~~~~~dg~i~~wd~~~~~~--------------~~~~~~~~~~i~~~~~s~~--~~~l~~~~~dg~i~iw~~~~~~~~~~ 281 (708)
++++.||.|++||+.++.. +..+..|...|.+++|+|+ +++|++++.||.|++||+.+
T Consensus 245 ~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~------ 318 (366)
T 3k26_A 245 LSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEV------ 318 (366)
T ss_dssp EEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCS------
T ss_pred EEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCC------
Confidence 9999999999999987643 7788889999999999999 99999999999999999988
Q ss_pred CCCCCCCCcceEEeEEEecc--ccceEEEEEe--CCEEEEEcCCCeEEEEeCC
Q psy12614 282 TSGPEQGSSVWVRSVNRVIH--EGDVKSLALH--GNRLYSGGLDSYLSLSYYP 330 (708)
Q Consensus 282 ~~g~~~~~~~~~~~~~~~~~--~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~ 330 (708)
++ ........+..| ...|.+++|+ +++|++++.||.|++||+.
T Consensus 319 --~~----~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 319 --ED----PHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRL 365 (366)
T ss_dssp --SS----GGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred --CC----CccccceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEec
Confidence 43 111134466677 7899999999 8899999999999999985
|
| >3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-37 Score=317.20 Aligned_cols=295 Identities=16% Similarity=0.167 Sum_probs=227.6
Q ss_pred eccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCC--CeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEE
Q psy12614 21 FYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISET--PHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEY 96 (708)
Q Consensus 21 ~~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~--~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vw 96 (708)
.+..|.+.|++++|+|++++||+|+.||.|+|||+.++ +.+. .+.+|. ..|.+++|+ +++|++++.|++|++|
T Consensus 6 ~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~-~~~~h~--~~v~~~~~s~~~~~l~s~s~d~~v~vw 82 (377)
T 3dwl_C 6 VLHILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHAR-TFSDHD--KIVTCVDWAPKSNRIVTCSQDRNAYVY 82 (377)
T ss_dssp EEEECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECC-CBCCCS--SCEEEEEECTTTCCEEEEETTSSEEEC
T ss_pred eEecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEE-EEecCC--ceEEEEEEeCCCCEEEEEeCCCeEEEE
Confidence 34456789999999999999999999999999999987 4444 888999 999999999 8999999999999999
Q ss_pred ECCCCe---EeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcE---EEEEeccc-ccccEEEEEECCCCCE
Q psy12614 97 DMRRLN---IKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGL---LYEKLLDR-QQGRILCTAWHSSGDY 169 (708)
Q Consensus 97 d~~~~~---~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~---~~~~~~~~-~~~~v~~~~~s~d~~~ 169 (708)
|+.+++ +...+..|...|.+++|+|++++|++++.|+.|++||+.+++. . ..+.. |...|.+++|+|++++
T Consensus 83 d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~--~~~~~~h~~~v~~~~~~~~~~~ 160 (377)
T 3dwl_C 83 EKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVS--KHLKRPLRSTILSLDWHPNNVL 160 (377)
T ss_dssp ------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCC--EEECSSCCSCEEEEEECTTSSE
T ss_pred EcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceee--eEeecccCCCeEEEEEcCCCCE
Confidence 999987 6777889999999999999999999999999999999998762 2 45666 9999999999999999
Q ss_pred EEEecCC-eEEEEEcCCCc------------------eEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEE
Q psy12614 170 LVTGCAA-AVRVWDIHKGH------------------AIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFW 229 (708)
Q Consensus 170 l~~~~~d-~i~iwd~~~~~------------------~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~w 229 (708)
|++++.| .|++||+..+. .+..+ .|...|.+++|+|+++ +++++.||.|++|
T Consensus 161 l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~v~~~~~sp~~~~l~~~~~d~~i~iw 232 (377)
T 3dwl_C 161 LAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY--------PSGGWVHAVGFSPSGNALAYAGHDSSVTIA 232 (377)
T ss_dssp EEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC--------CCSSSEEEEEECTTSSCEEEEETTTEEC-C
T ss_pred EEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc--------cCCceEEEEEECCCCCEEEEEeCCCcEEEE
Confidence 9999999 99999986332 22222 2378899999999996 9999999999999
Q ss_pred eCCCCee----EEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccC-CC--CCCCC-------------
Q psy12614 230 DGKTGVQ----WSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCST-SG--PEQGS------------- 289 (708)
Q Consensus 230 d~~~~~~----~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~-~g--~~~~~------------- 289 (708)
|+.+++. +..+.+|...|.+++|+|++++|++++.++.+ +|+.......... .. .....
T Consensus 233 d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (377)
T 3dwl_C 233 YPSAPEQPPRALITVKLSQLPLRSLLWANESAIVAAGYNYSPI-LLQGNESGWAHTRDLDAGTSKTSFTHTGNTGEGREE 311 (377)
T ss_dssp EECSTTSCEEECCCEECSSSCEEEEEEEETTEEEEEESSSSEE-EECCCC---CCSBCCCSCCCCCCBSSSSSBCCCCCC
T ss_pred ECCCCCCcceeeEeecCCCCceEEEEEcCCCCEEEEEcCCcEE-EEEeCCCceEEEeeeccccccccccccccccccccc
Confidence 9999887 77888999999999999999999988766655 6666531100000 00 00000
Q ss_pred ----------cceE----------EeEEEeccccceEEEEEe---CC---EEEEEcCCCeEEEEeC
Q psy12614 290 ----------SVWV----------RSVNRVIHEGDVKSLALH---GN---RLYSGGLDSYLSLSYY 329 (708)
Q Consensus 290 ----------~~~~----------~~~~~~~~~~~v~~l~~~---~~---~l~s~~~d~~i~iw~~ 329 (708)
..+. .......|...|.++++. +. .+++++.||.|++||+
T Consensus 312 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~H~~~i~~~~~~~~~~~~~~~~~s~g~Dg~i~iWdl 377 (377)
T 3dwl_C 312 EGPVSFTALRSTFRNMDLKGSSQSISSLPTVHQNMIATLRPYAGTPGNITAFTSSGTDGRVVLWTL 377 (377)
T ss_dssp -------------------------CCCSSSCSSCEEEEEEEEEETTEEEEEEEEETTSEEEEECC
T ss_pred ccccccccccccccchhhccccccccccCccccceeEEEeccCCCCCceEEEEeecCCCcEEEecC
Confidence 0000 001112399999999976 33 6999999999999985
|
| >2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-38 Score=316.58 Aligned_cols=314 Identities=12% Similarity=0.095 Sum_probs=250.6
Q ss_pred CCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe-CCEEEEEcCCCcEEEEECCCCe
Q psy12614 24 PEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF-NDRLFSGGLQGFVNEYDMRRLN 102 (708)
Q Consensus 24 ~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~-~~~l~s~~~d~~i~vwd~~~~~ 102 (708)
.-..+|.+++|||||+++|+++.|++|+ |...++ .+.+|. ..|.+++|+ .. .++.+.+|+.+.
T Consensus 13 ~~~~~v~sv~~SpDG~~iASas~D~TV~--d~~~~~----~l~gh~--~~v~~V~FsPdg------~~~~~~~~~~~~-- 76 (588)
T 2j04_A 13 EFEDWKNNLTWARDGTLYLTTFPDISIG--QPKYAK----DINCNS--KNLFHVKEFPLE------FENKLDFELAQQ-- 76 (588)
T ss_dssp CCSSSSCCEEECTTSCEEEECSSSEEEE--EECCCS----CCSSBG--GGTEEEEEECCC------CCCTTTTSCCCS--
T ss_pred HhhccEEEEEECCCCCEEEEEcCCceee--cccccc----eecCCC--ccEEEEEECCCC------CcceEEEEeCCC--
Confidence 3458899999999999999999999999 766554 347999 999999999 22 455555555432
Q ss_pred EeEEEe-ecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccc-----cEEEEEECCCCCEEEEecCC
Q psy12614 103 IKSSTA-VTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQG-----RILCTAWHSSGDYLVTGCAA 176 (708)
Q Consensus 103 ~~~~~~-~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~-----~v~~~~~s~d~~~l~~~~~d 176 (708)
...+. .|...|.+++|||||++||+++.||.|++||.++ +. ..+. |.. .|.+++|||||++||+|+.|
T Consensus 77 -~~~~~~~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l--~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~D 150 (588)
T 2j04_A 77 -NGLLNSQPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--ML--TNLD-SKGNLSSRTYHCFEWNPIESSIVVGNED 150 (588)
T ss_dssp -SCSSTTSCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EE--EECC-CSSCSTTTCEEEEEECSSSSCEEEEETT
T ss_pred -ceEeecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--ee--eecc-CCCccccccEEEEEEcCCCCEEEEEcCC
Confidence 22233 4578999999999999999999999999999554 33 4555 554 59999999999999999999
Q ss_pred -eEEEEEcCCCce-------EEEEEecccCCCCCceeEEEEEEccCCEEEEEcCCCcEEEEeCCCCee---EEEe-eccc
Q psy12614 177 -AVRVWDIHKGHA-------IHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQ---WSDV-KTHK 244 (708)
Q Consensus 177 -~i~iwd~~~~~~-------~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~---~~~~-~~~~ 244 (708)
+|++||+.++.. +..+..... +|...|.+++|+||| +++++.|+.|++||+.++.. ..++ .+|.
T Consensus 151 GtVkIWd~~~~~l~~~~~i~l~ti~~~~~---gh~~~V~sVawSPdg-Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~ 226 (588)
T 2j04_A 151 GELQFFSIRKNSENTPEFYFESSIRLSDA---GSKDWVTHIVWYEDV-LVAALSNNSVFSMTVSASSHQPVSRMIQNASR 226 (588)
T ss_dssp SEEEEEECCCCTTTCCCCEEEEEEECSCT---TCCCCEEEEEEETTE-EEEEETTCCEEEECCCSSSSCCCEEEEECCCS
T ss_pred CEEEEEECCCCccccccceeeeeeecccc---cccccEEEEEEcCCc-EEEEeCCCeEEEEECCCCccccceeeeccccc
Confidence 999999998863 455543333 337899999999999 99999999999999988773 3556 4788
Q ss_pred cCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEE--e--CCEEEEEcC
Q psy12614 245 KDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLAL--H--GNRLYSGGL 320 (708)
Q Consensus 245 ~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~--~--~~~l~s~~~ 320 (708)
..|.+++|+ ++.|++++ ++.|++||+.+ ++ ......+|...|..+++ + +..+++++.
T Consensus 227 ~~V~svaFs--g~~LASa~-~~tIkLWd~~~--------~~--------~~~~~~gh~~~V~~va~~~s~d~~~La~a~e 287 (588)
T 2j04_A 227 RKITDLKIV--DYKVVLTC-PGYVHKIDLKN--------YS--------ISSLKTGSLENFHIIPLNHEKESTILLMSNK 287 (588)
T ss_dssp SCCCCEEEE--TTEEEEEC-SSEEEEEETTT--------TE--------EEEEECSCCSCCCEEEETTCSSCEEEEECSS
T ss_pred CcEEEEEEE--CCEEEEEe-CCeEEEEECCC--------Ce--------EEEEEcCCCceEEEEEeeeCCCCCEEEEEcC
Confidence 999999999 58999887 69999999998 53 22333389999999999 7 668999999
Q ss_pred CCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEEEcCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEe
Q psy12614 321 DSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSA 400 (708)
Q Consensus 321 d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (708)
||. ++|..+ .++++|++.+++.. ++.+++|+...+.. .. .
T Consensus 288 dG~-klw~~d---------------~~~~spd~~l~a~~-d~~v~lW~~~g~~l----------------------~~-~ 327 (588)
T 2j04_A 288 TSY-KVLLED---------------ELHVTADNIIAPYL-EKKFKKWSTIWNEF----------------------NN-Y 327 (588)
T ss_dssp CEE-EEEESS---------------SEEEECCCSSHHHH-HHHHHHTTTTTTSS----------------------SS-S
T ss_pred CCC-EEEeec---------------cEEECCCceEEEEc-CCEEEEEECCCCce----------------------ee-e
Confidence 999 999985 37799999888875 88899998754330 01 1
Q ss_pred cCCCceEEEEeCCCCcEEEEEc
Q psy12614 401 VNNATIRCSVVSNDGKYVAYST 422 (708)
Q Consensus 401 ~~~~~i~~~~~s~~g~~l~~~~ 422 (708)
.+...|.+++|||||+.+|++.
T Consensus 328 ~~~~~I~~va~SPdG~~lA~~~ 349 (588)
T 2j04_A 328 ETTLVIHGISLSPDGYSIAIVY 349 (588)
T ss_dssp CCEEEEEEEEECTTSSEEEEEE
T ss_pred ccceEEEEEEECCCCCEEEEEE
Confidence 2245689999999999999753
|
| >3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-36 Score=308.84 Aligned_cols=322 Identities=11% Similarity=0.144 Sum_probs=259.2
Q ss_pred EEEEEEe--CCEEEEEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEec
Q psy12614 74 IECLTWF--NDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLL 151 (708)
Q Consensus 74 v~~l~~~--~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~ 151 (708)
+++++|+ +++|++++.|+.|++||+.+++....+..| ..+...+|+|++++||+++.|+.|++||+.+++.. ..+
T Consensus 59 ~~~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~--~~~ 135 (420)
T 3vl1_A 59 GKGNTFEKVGSHLYKARLDGHDFLFNTIIRDGSKMLKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQR--EID 135 (420)
T ss_dssp CTTCEEEEEETTEEEEEETTEEEEEECCSEETTTTSCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEE--EET
T ss_pred ccceeeeecCCeEEEEEcCCcEEEEEecccceeeEEecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCccee--eec
Confidence 4578999 999999999999999999998877666666 55666688999999999999999999999988876 677
Q ss_pred ccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEE
Q psy12614 152 DRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFW 229 (708)
Q Consensus 152 ~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~w 229 (708)
.+|.+.|.+++|+|++++|++++.| .|++||+.+++.+..+. .|...|.+++|+|++. +++++.||.|++|
T Consensus 136 ~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~-------~h~~~v~~~~~~~~~~~l~s~~~d~~v~iw 208 (420)
T 3vl1_A 136 QAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLI-------GHRATVTDIAIIDRGRNVLSASLDGTIRLW 208 (420)
T ss_dssp TSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEE-------CCSSCEEEEEEETTTTEEEEEETTSCEEEE
T ss_pred ccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEc-------CCCCcEEEEEEcCCCCEEEEEcCCCcEEEe
Confidence 8999999999999999999999999 99999999999888876 3488999999999995 9999999999999
Q ss_pred eCCCCeeEEEeec---cccCeEE---------------------EEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCC
Q psy12614 230 DGKTGVQWSDVKT---HKKDILA---------------------LTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGP 285 (708)
Q Consensus 230 d~~~~~~~~~~~~---~~~~i~~---------------------~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~ 285 (708)
|+++++.+..+.. +...+.+ ++|+|++++|++++.||.|++||+.+ ++
T Consensus 209 d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~--------~~ 280 (420)
T 3vl1_A 209 ECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFS--------KE 280 (420)
T ss_dssp ETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTT--------CC
T ss_pred ECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCC--------Cc
Confidence 9999999888864 3344444 45578999999999999999999988 54
Q ss_pred CCCCcceEEeEE-EeccccceEEEEEe--CC-EEEEEcCCCeEEEEeCCCCc--eeecCccCCCCceEEEEcCCcEEEEE
Q psy12614 286 EQGSSVWVRSVN-RVIHEGDVKSLALH--GN-RLYSGGLDSYLSLSYYPPKT--LVKYPCTLAQSTPVSLAKDIQHVLLQ 359 (708)
Q Consensus 286 ~~~~~~~~~~~~-~~~~~~~v~~l~~~--~~-~l~s~~~d~~i~iw~~~~~~--~~~~~~~~~~~~~~~~s~~~~~l~~~ 359 (708)
.... ...|...|.+++|+ +. +|++++.||.|++||+.+.. +..+..+........+.+++++++++
T Consensus 281 --------~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~ 352 (420)
T 3vl1_A 281 --------QTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNVYFAAGALFVSS 352 (420)
T ss_dssp --------EEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEEEEEEETTEEEEEE
T ss_pred --------eeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCceEEEeCCCCEEEEe
Confidence 3333 34588899999999 55 99999999999999998764 34444323333334466688888876
Q ss_pred -cCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCc----EEEEEcCCceEEEEEEe
Q psy12614 360 -YTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGK----YVAYSTESCVRLHSLDL 433 (708)
Q Consensus 360 -~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~----~l~~~~d~~i~i~~~~~ 433 (708)
.|+.+++|++..... ...+ ... ........+...|.+++|+|+++ ++++|.+|.+.+|+++.
T Consensus 353 ~~d~~v~iw~~~~~~~-------~~~~-~~~----~~~~~~~~~~~~v~~~~~s~~~~~~g~l~a~g~~g~~~~~~~~~ 419 (420)
T 3vl1_A 353 GFDTSIKLDIISDPES-------ERPA-IEF----ETPTFLVSNDDAVSQFCYVSDDESNGEVLEVGKNNFCALYNLSN 419 (420)
T ss_dssp TTTEEEEEEEECCTTC-------CSCE-ECT----TSCEEECCSSCCCCEEEEECCSSSSCEEEEEETTTEEEEEESCC
T ss_pred cCCccEEEEeccCCCC-------Cccc-eec----cCccEEccCCcceEEEEEccCCCCcceEEEEcCCceEEEEeccC
Confidence 789999999987431 0000 000 00112346788999999999999 66678899999999763
|
| >4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-36 Score=312.01 Aligned_cols=288 Identities=16% Similarity=0.214 Sum_probs=229.9
Q ss_pred eccCCCCcEEEEEEcC-CCCEEEEEeCCCcEEEEeCCCCCeEE-EEEecCCCCCcEEEEEEe---CCEEEEEcCCCcEEE
Q psy12614 21 FYAPEPKVINCIACEP-KSSRLAVSRADQSIEIWDISETPHVD-RVFIGDPLSNSIECLTWF---NDRLFSGGLQGFVNE 95 (708)
Q Consensus 21 ~~~~h~~~v~~~~~s~-~~~~la~~~~dg~v~iwd~~~~~~~~-~~~~~h~~~~~v~~l~~~---~~~l~s~~~d~~i~v 95 (708)
...+|...|+|++|+| ++++||+|+.||.|+|||+.++.... ..+.+|. +.|++|+|+ +++|++++.||+|++
T Consensus 114 ~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~--~~V~~l~f~p~~~~~l~s~s~D~~v~i 191 (435)
T 4e54_B 114 KAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAG--GSITGLKFNPLNTNQFYASSMEGTTRL 191 (435)
T ss_dssp EEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSS--CCCCEEEECSSCTTEEEEECSSSCEEE
T ss_pred cCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCC--CCEEEEEEeCCCCCEEEEEeCCCEEEE
Confidence 3457889999999999 56799999999999999998866433 2456898 999999998 789999999999999
Q ss_pred EECCCCeEeEEEee--cCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCC-EEEE
Q psy12614 96 YDMRRLNIKSSTAV--TSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGD-YLVT 172 (708)
Q Consensus 96 wd~~~~~~~~~~~~--~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~-~l~~ 172 (708)
||++++........ +...+.+++|+|++++|++|+.||.|++||+++... ..+.+|...|.+++|+|++. +|++
T Consensus 192 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~~~---~~~~~h~~~v~~v~~~p~~~~~~~s 268 (435)
T 4e54_B 192 QDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGKEL---WNLRMHKKKVTHVALNPCCDWFLAT 268 (435)
T ss_dssp EETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSCBC---CCSBCCSSCEEEEEECTTCSSEEEE
T ss_pred eeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCccee---EEEecccceEEeeeecCCCceEEEE
Confidence 99988665444433 334678999999999999999999999999986654 67889999999999999986 7788
Q ss_pred ecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCeeEEEeecccc-----
Q psy12614 173 GCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDVKTHKK----- 245 (708)
Q Consensus 173 ~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~~~~~~----- 245 (708)
++.| .|++||+++++....+.... .|...|++++|+|+|. |++++.||.|++||+.++.....+..|..
T Consensus 269 ~s~d~~v~iwd~~~~~~~~~~~~~~----~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~ 344 (435)
T 4e54_B 269 ASVDQTVKIWDLRQVRGKASFLYSL----PHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQH 344 (435)
T ss_dssp EETTSBCCEEETTTCCSSSCCSBCC----BCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCCCCCCCSS
T ss_pred ecCcceeeEEecccccccceEEEee----eccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEeccccccccc
Confidence 9999 99999998876554443221 4588999999999995 99999999999999999888777655542
Q ss_pred -CeEEEEEeCCCCEEEEEe------------cCCeEEEEEccCCcccccCCCCCCCCcceEEeEEE-eccccceEEE-EE
Q psy12614 246 -DILALTVSEDENYLYCAG------------VDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNR-VIHEGDVKSL-AL 310 (708)
Q Consensus 246 -~i~~~~~s~~~~~l~~~~------------~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~v~~l-~~ 310 (708)
.+....|+|++..++++. .++.|++||..+ |+ ....+ .+|...|.++ +|
T Consensus 345 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~--------g~--------~~~~l~~~~~~~v~s~~~f 408 (435)
T 4e54_B 345 LTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNS--------GK--------MMCQLYDPESSGISSLNEF 408 (435)
T ss_dssp SCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSS--------CC--------EEEEECCSSCCCCCCEEEE
T ss_pred ceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCC--------Cc--------EEEEEeCCCCCcEEEEEEE
Confidence 234456777777777664 235799999998 75 34443 4688888887 57
Q ss_pred e--CCEEEEEcCCCeEEEEeCCCCce
Q psy12614 311 H--GNRLYSGGLDSYLSLSYYPPKTL 334 (708)
Q Consensus 311 ~--~~~l~s~~~d~~i~iw~~~~~~~ 334 (708)
+ +.+|++|+ |+.|++|+++++..
T Consensus 409 spdg~~lasg~-d~~i~iW~~~~gk~ 433 (435)
T 4e54_B 409 NPMGDTLASAM-GYHILIWSQQEART 433 (435)
T ss_dssp CTTSSCEEEEC-SSEEEECCCC----
T ss_pred CCCCCEEEEEc-CCcEEEEECCcCee
Confidence 7 77888765 88999999987653
|
| >3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-34 Score=318.81 Aligned_cols=305 Identities=11% Similarity=0.134 Sum_probs=239.7
Q ss_pred EEEEEecCCCCCcEEEEEEe---CCEEEEEcCCCcEEEEECCC-----CeEeEEEeecCCceEEEEEecCCCEEEEEeCC
Q psy12614 61 VDRVFIGDPLSNSIECLTWF---NDRLFSGGLQGFVNEYDMRR-----LNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQ 132 (708)
Q Consensus 61 ~~~~~~~h~~~~~v~~l~~~---~~~l~s~~~d~~i~vwd~~~-----~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d 132 (708)
+...+.+|. +.|++++|+ +++|++|+.|++|++||+.+ +.....+.+|...|.+++|+|++++|++|+.|
T Consensus 374 ~~~~l~~H~--~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~D 451 (694)
T 3dm0_A 374 LKGTMRAHT--DMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWD 451 (694)
T ss_dssp EEEEEECCS--SCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETT
T ss_pred hhhhcccCC--ceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCC
Confidence 345789999 999999998 57899999999999999976 34567889999999999999999999999999
Q ss_pred CcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEE
Q psy12614 133 GHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAF 211 (708)
Q Consensus 133 ~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 211 (708)
+.|++||+.++... ..+.+|...|.+++|+|++++|++++.| +|++||..... ...+..... +|...|.+++|
T Consensus 452 g~v~vwd~~~~~~~--~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~-~~~~~~~~~---~h~~~v~~~~~ 525 (694)
T 3dm0_A 452 GELRLWDLAAGVST--RRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGEC-KYTISEGGE---GHRDWVSCVRF 525 (694)
T ss_dssp SEEEEEETTTTEEE--EEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCE-EEEECSSTT---SCSSCEEEEEE
T ss_pred CcEEEEECCCCcce--eEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCc-ceeeccCCC---CCCCcEEEEEE
Confidence 99999999999877 7788999999999999999999999999 99999986543 333332222 44888999999
Q ss_pred ccCC---EEEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCC
Q psy12614 212 CADF---TIITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQG 288 (708)
Q Consensus 212 ~~~~---~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~ 288 (708)
+|++ .+++++.|+.|++||+++++....+.+|...|.+++|+|++++|++++.||.|++||+.+ ++
T Consensus 526 ~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~--------~~--- 594 (694)
T 3dm0_A 526 SPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAE--------GK--- 594 (694)
T ss_dssp CSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTT--------TE---
T ss_pred eCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCC--------Cc---
Confidence 9987 489999999999999999999999999999999999999999999999999999999998 64
Q ss_pred CcceEEeEEEeccccceEEEEEe-CCEEEEEcCCCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEEEcCCeEEEE
Q psy12614 289 SSVWVRSVNRVIHEGDVKSLALH-GNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELW 367 (708)
Q Consensus 289 ~~~~~~~~~~~~~~~~v~~l~~~-~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~i~ 367 (708)
....+ .+...|.+++|+ ...+++++.++.|++||+.+..+.............
T Consensus 595 -----~~~~~-~~~~~v~~~~~sp~~~~l~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~-------------------- 648 (694)
T 3dm0_A 595 -----KLYSL-EANSVIHALCFSPNRYWLCAATEHGIKIWDLESKSIVEDLKVDLKAEAE-------------------- 648 (694)
T ss_dssp -----EEECC-BCSSCEEEEEECSSSSEEEEEETTEEEEEETTTTEEEEEECCCCC------------------------
T ss_pred -----eEEEe-cCCCcEEEEEEcCCCcEEEEEcCCCEEEEECCCCCChhhhccccccccc--------------------
Confidence 33333 345679999999 445555566777999999876532211000000000
Q ss_pred EecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEEEc-CCceEEEEEE
Q psy12614 368 SLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYST-ESCVRLHSLD 432 (708)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~-d~~i~i~~~~ 432 (708)
.... .-......+...+++++|+|+|++|++|. ||.|++|++.
T Consensus 649 ~~~~----------------------~~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 649 KADN----------------------SGPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWGIG 692 (694)
T ss_dssp ----------------------------------CCCCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred cccc----------------------cccccCCceeEEeeeEEEcCCCCEEEEEcCCCeEEEEecc
Confidence 0000 00000012223578999999999999955 9999999985
|
| >1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-35 Score=302.82 Aligned_cols=289 Identities=14% Similarity=0.301 Sum_probs=248.5
Q ss_pred eeeccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEeCCEEEEEcCCCcEEEEEC
Q psy12614 19 IKFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWFNDRLFSGGLQGFVNEYDM 98 (708)
Q Consensus 19 ~~~~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~~~~l~s~~~d~~i~vwd~ 98 (708)
.....+|...|.|+++ ++++||+|+.||.|++||+.+++.+. .+.+|. ..|.+++|.+++|++|+.||+|++||+
T Consensus 126 ~~~~~~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~~~~-~~~~h~--~~v~~l~~~~~~l~sg~~dg~i~vwd~ 200 (435)
T 1p22_A 126 IHCRSETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKR-ILTGHT--GSVLCLQYDERVIITGSSDSTVRVWDV 200 (435)
T ss_dssp EECCCSSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEEE-EECCCS--SCEEEEECCSSEEEEEETTSCEEEEES
T ss_pred EecccCCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCCeEEE-EEcCCC--CcEEEEEECCCEEEEEcCCCeEEEEEC
Confidence 3344577888999887 78999999999999999999998876 899999 999999999999999999999999999
Q ss_pred CCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEE-EEEecccccccEEEEEECCCCCEEEEecCC-
Q psy12614 99 RRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLL-YEKLLDRQQGRILCTAWHSSGDYLVTGCAA- 176 (708)
Q Consensus 99 ~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~-~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d- 176 (708)
.+++.+..+.+|...|.+++|++ .++++|+.||.|++||+.++... ....+.+|...|.+++| ++++|++++.|
T Consensus 201 ~~~~~~~~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg 276 (435)
T 1p22_A 201 NTGEMLNTLIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDR 276 (435)
T ss_dssp SSCCEEEEECCCCSCEEEEECCT--TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTS
T ss_pred CCCcEEEEEcCCCCcEEEEEEcC--CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCC
Confidence 99999999999999999999974 58999999999999999877643 23567889999999999 78899999999
Q ss_pred eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCC
Q psy12614 177 AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDE 256 (708)
Q Consensus 177 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~ 256 (708)
.|++||+.+++.+..+.. +...+.+++|. +..+++|+.||.|++||+++++.+..+.+|...|.+++| ++
T Consensus 277 ~i~vwd~~~~~~~~~~~~-------~~~~v~~~~~~-~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~--~~ 346 (435)
T 1p22_A 277 TIKVWNTSTCEFVRTLNG-------HKRGIACLQYR-DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DN 346 (435)
T ss_dssp EEEEEETTTCCEEEEEEC-------CSSCEEEEEEE-TTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEC--CS
T ss_pred eEEEEECCcCcEEEEEcC-------CCCcEEEEEeC-CCEEEEEeCCCeEEEEECCCCCEEEEEeCCcCcEEEEEe--cC
Confidence 999999999999888863 37889999994 346999999999999999999999999999999999998 78
Q ss_pred CEEEEEecCCeEEEEEccCCcccccCCCCCCC-CcceEEeEEEeccccceEEEEEeCCEEEEEcCCCeEEEEeCCCCce
Q psy12614 257 NYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQG-SSVWVRSVNRVIHEGDVKSLALHGNRLYSGGLDSYLSLSYYPPKTL 334 (708)
Q Consensus 257 ~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~v~~l~~~~~~l~s~~~d~~i~iw~~~~~~~ 334 (708)
++|++|+.||.|++||+.+ +.... .........+.+|.+.|.+++|.+..|++++.||.|++||+.+...
T Consensus 347 ~~l~sg~~dg~i~vwd~~~--------~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~Dg~i~iwd~~~~~~ 417 (435)
T 1p22_A 347 KRIVSGAYDGKIKVWDLVA--------ALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTILIWDFLNDPA 417 (435)
T ss_dssp SEEEEEETTSCEEEEEHHH--------HTSTTSCTTTTEEEEECCCSSCCCCEEECSSCEEECCSSSEEEEEC------
T ss_pred CEEEEEeCCCcEEEEECCC--------CCCccccccchheeeccCCCCCeEEEEeCCCEEEEEeCCCEEEEEECCCCCC
Confidence 8999999999999999976 22000 0011145677899999999999999999999999999999987653
|
| >1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-35 Score=298.86 Aligned_cols=247 Identities=18% Similarity=0.184 Sum_probs=217.6
Q ss_pred EEEEecCCCCCcEEEEEEeCCEEEEEcCCCcEEEEECCCCe------EeEEEeecCCceEEEEEecC----C---CEEEE
Q psy12614 62 DRVFIGDPLSNSIECLTWFNDRLFSGGLQGFVNEYDMRRLN------IKSSTAVTSGTCWCLSVHKK----K---RLLAA 128 (708)
Q Consensus 62 ~~~~~~h~~~~~v~~l~~~~~~l~s~~~d~~i~vwd~~~~~------~~~~~~~~~~~v~~~~~s~~----~---~~la~ 128 (708)
...+.+|. ..|.+++|+.++|++++.||.|++||+.+++ ....+.+|...|.+++|+|+ + ++|++
T Consensus 9 ~~~~~~h~--~~i~~~~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s 86 (397)
T 1sq9_A 9 ANAGKAHD--ADIFSVSACNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVAT 86 (397)
T ss_dssp EEESSCSS--SCEEEEEECSSEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEE
T ss_pred hhhhhhhh--cCeEEEEecCCeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEE
Confidence 34778999 9999999999999999999999999999988 78889999999999999999 9 99999
Q ss_pred EeCCCcEEEEEccCCcE-----EEEEecccc-----cccEEEEEEC----CCCCE-EEEecCC-eEEEEEcCC------C
Q psy12614 129 GTEQGHINLFQISDEGL-----LYEKLLDRQ-----QGRILCTAWH----SSGDY-LVTGCAA-AVRVWDIHK------G 186 (708)
Q Consensus 129 ~~~d~~i~iwd~~~~~~-----~~~~~~~~~-----~~~v~~~~~s----~d~~~-l~~~~~d-~i~iwd~~~------~ 186 (708)
++.|+.|++||+.+++. . ..+..| ...|.+++|+ |++++ |++++.| .|++||+.+ +
T Consensus 87 ~~~dg~i~iw~~~~~~~~~~~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 164 (397)
T 1sq9_A 87 TSFSGDLLFYRITREDETKKVIF--EKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNS 164 (397)
T ss_dssp EETTSCEEEEEEEECTTTCCEEE--EEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHH
T ss_pred EcCCCCEEEEEccCCcccccccc--eeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCcccccccc
Confidence 99999999999998874 4 567777 5899999999 99999 9999999 999999988 6
Q ss_pred ceEE-----EEEe-----cccCCCCCceeEEEEEEccCCEEEEEcCCCcEEEEeCCCCeeEEEeec---c---ccCeEEE
Q psy12614 187 HAIH-----KMSL-----DKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVKT---H---KKDILAL 250 (708)
Q Consensus 187 ~~~~-----~~~~-----~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~---~---~~~i~~~ 250 (708)
+.+. .+.. . .+...+.+++|+|++.+++++.||.|++||+++++.+..+.. | ...|.++
T Consensus 165 ~~~~~~~~~~~~~~~~~~~-----~~~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i 239 (397)
T 1sq9_A 165 LTLNWSPTLELQGTVESPM-----TPSQFATSVDISERGLIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSV 239 (397)
T ss_dssp TTTCCCCEEEEEEEECCSS-----SSCCCCCEEEECTTSEEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEE
T ss_pred ceeeccCcceeeeeecccc-----CCCCCceEEEECCCceEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceE
Confidence 6655 5532 1 347889999999999778899999999999999999999998 8 9999999
Q ss_pred EEeCCCCEEEEEecC---CeEEEEEccCCcccccCCCCCCCCcceEEeEEEec-------------cccceEEEEEe--C
Q psy12614 251 TVSEDENYLYCAGVD---PTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVI-------------HEGDVKSLALH--G 312 (708)
Q Consensus 251 ~~s~~~~~l~~~~~d---g~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-------------~~~~v~~l~~~--~ 312 (708)
+|+|++++|++++.| +.|++||+.+ ++ ....+.. |...|.+++|+ +
T Consensus 240 ~~~~~~~~l~~~~~d~~~g~i~i~d~~~--------~~--------~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 303 (397)
T 1sq9_A 240 KFSPQGSLLAIAHDSNSFGCITLYETEF--------GE--------RIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSG 303 (397)
T ss_dssp EECSSTTEEEEEEEETTEEEEEEEETTT--------CC--------EEEEECBC--------CCBSBSSCEEEEEECSSS
T ss_pred EECCCCCEEEEEecCCCCceEEEEECCC--------Cc--------ccceeccCcccccccccccccCCcEEEEEECCCC
Confidence 999999999999999 9999999998 65 5666777 89999999998 8
Q ss_pred CEEEEEcCCCeEEEEeCCCCc
Q psy12614 313 NRLYSGGLDSYLSLSYYPPKT 333 (708)
Q Consensus 313 ~~l~s~~~d~~i~iw~~~~~~ 333 (708)
.+|++++.|+.|++||+.+..
T Consensus 304 ~~l~~~~~dg~i~iwd~~~~~ 324 (397)
T 1sq9_A 304 ETLCSAGWDGKLRFWDVKTKE 324 (397)
T ss_dssp SEEEEEETTSEEEEEETTTTE
T ss_pred CEEEEEeCCCeEEEEEcCCCc
Confidence 899999999999999997654
|
| >3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-36 Score=294.92 Aligned_cols=249 Identities=16% Similarity=0.209 Sum_probs=206.3
Q ss_pred eccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCe-EEEEEecCCCCCcEEEEEEe----CCEEEEEcCCCcEEE
Q psy12614 21 FYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPH-VDRVFIGDPLSNSIECLTWF----NDRLFSGGLQGFVNE 95 (708)
Q Consensus 21 ~~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~-~~~~~~~h~~~~~v~~l~~~----~~~l~s~~~d~~i~v 95 (708)
++.+|.+.|++++|+|+|++||+|+.|++|+|||+.++.. ....+.+|. ..|.+++|+ +++|++++.|++|++
T Consensus 8 ~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~--~~V~~v~~~~~~~~~~l~s~s~D~~v~i 85 (316)
T 3bg1_A 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHE--GPVWQVAWAHPMYGNILASCSYDRKVII 85 (316)
T ss_dssp ------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCS--SCEEEEEECCGGGSSCEEEEETTSCEEE
T ss_pred ecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCC--ccEEEEEeCCCCCCCEEEEEECCCEEEE
Confidence 5679999999999999999999999999999999988753 334789999 999999996 689999999999999
Q ss_pred EECCCCe--EeEEEeecCCceEEEEEecC--CCEEEEEeCCCcEEEEEccCCc-EEEEEecccccccEEEEEECCC----
Q psy12614 96 YDMRRLN--IKSSTAVTSGTCWCLSVHKK--KRLLAAGTEQGHINLFQISDEG-LLYEKLLDRQQGRILCTAWHSS---- 166 (708)
Q Consensus 96 wd~~~~~--~~~~~~~~~~~v~~~~~s~~--~~~la~~~~d~~i~iwd~~~~~-~~~~~~~~~~~~~v~~~~~s~d---- 166 (708)
||+++++ ....+.+|...|.+++|+|+ +.+|++|+.|+.|++||+..+. ......+.+|...|.+++|+|+
T Consensus 86 Wd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~ 165 (316)
T 3bg1_A 86 WREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPG 165 (316)
T ss_dssp ECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC-
T ss_pred EECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCc
Confidence 9999874 66778899999999999998 7899999999999999998763 3222567789999999999998
Q ss_pred -------------CCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCC-----EEEEEcCCCcEE
Q psy12614 167 -------------GDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADF-----TIITGDSGGFVR 227 (708)
Q Consensus 167 -------------~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-----~l~~~~~dg~i~ 227 (708)
+++|++++.| .|++||+..+.......... +|...|.+++|+|++ .+++++.||.|+
T Consensus 166 ~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~----~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~ 241 (316)
T 3bg1_A 166 SLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLE----AHSDWVRDVAWAPSIGLPTSTIASCSQDGRVF 241 (316)
T ss_dssp -----CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCB----CCSSCEEEEECCCCSSCSCCEEEEEETTCEEE
T ss_pred cccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecc----cCCCceEEEEecCCCCCCCceEEEEcCCCeEE
Confidence 4789999999 99999997653222221111 458899999999985 499999999999
Q ss_pred EEeCCCC---e-eEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccC
Q psy12614 228 FWDGKTG---V-QWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTR 275 (708)
Q Consensus 228 ~wd~~~~---~-~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~ 275 (708)
+|++.+. . ....+..|...|.+++|+|++++|++++.|+.|++|+...
T Consensus 242 iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~~ 293 (316)
T 3bg1_A 242 IWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESV 293 (316)
T ss_dssp EEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEECT
T ss_pred EEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEECC
Confidence 9998763 1 2234566889999999999999999999999999999864
|
| >4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-34 Score=296.37 Aligned_cols=280 Identities=19% Similarity=0.282 Sum_probs=240.5
Q ss_pred CCCCc--EEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECC
Q psy12614 24 PEPKV--INCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMR 99 (708)
Q Consensus 24 ~h~~~--v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~ 99 (708)
+|... +.+++|++ ..+++++.||.|++||+.+++........|. ..|.+++|+ +++|++++.||.|++||+.
T Consensus 89 ~~~~~~~~~~~~~s~--~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~--~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~ 164 (401)
T 4aez_A 89 GIIDDYYLNLLDWSN--LNVVAVALERNVYVWNADSGSVSALAETDES--TYVASVKWSHDGSFLSVGLGNGLVDIYDVE 164 (401)
T ss_dssp TCCCCTTCBCEEECT--TSEEEEEETTEEEEEETTTCCEEEEEECCTT--CCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred CCcCCceEEEEeecC--CCEEEEECCCeEEEeeCCCCcEeEeeecCCC--CCEEEEEECCCCCEEEEECCCCeEEEEECc
Confidence 55554 34466664 5678888899999999999998773444477 999999999 8999999999999999999
Q ss_pred CCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccC-CcEEEEEecccccccEEEEEECCCCCEEEEecCC-e
Q psy12614 100 RLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISD-EGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-A 177 (708)
Q Consensus 100 ~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~ 177 (708)
+++.+..+.+|...|.+++| ++++|++++.||.|++||+.. +... ..+.+|.+.|.+++|+|++++|++++.| .
T Consensus 165 ~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~ 240 (401)
T 4aez_A 165 SQTKLRTMAGHQARVGCLSW--NRHVLSSGSRSGAIHHHDVRIANHQI--GTLQGHSSEVCGLAWRSDGLQLASGGNDNV 240 (401)
T ss_dssp TCCEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEE--EEEECCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred CCeEEEEecCCCCceEEEEE--CCCEEEEEcCCCCEEEEecccCccee--eEEcCCCCCeeEEEEcCCCCEEEEEeCCCe
Confidence 99999999999999999999 457999999999999999984 4444 6788899999999999999999999999 9
Q ss_pred EEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE--EEEEc--CCCcEEEEeCCCCeeEEEeeccccCeEEEEEe
Q psy12614 178 VRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT--IITGD--SGGFVRFWDGKTGVQWSDVKTHKKDILALTVS 253 (708)
Q Consensus 178 i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--l~~~~--~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s 253 (708)
|++||+.+++.+..+.. +...|.+++|+|++. +++++ .|+.|++||+.+++.+..+. +...|.+++|+
T Consensus 241 v~iwd~~~~~~~~~~~~-------~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~-~~~~v~~~~~s 312 (401)
T 4aez_A 241 VQIWDARSSIPKFTKTN-------HNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVD-AGSQVTSLIWS 312 (401)
T ss_dssp EEEEETTCSSEEEEECC-------CSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEE-CSSCEEEEEEC
T ss_pred EEEccCCCCCccEEecC-------CcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEe-CCCcEEEEEEC
Confidence 99999999988877753 378899999999873 55554 79999999999999988886 67889999999
Q ss_pred CCCCEEEEEe--cCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEEEcCCCeEEEEeC
Q psy12614 254 EDENYLYCAG--VDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSGGLDSYLSLSYY 329 (708)
Q Consensus 254 ~~~~~l~~~~--~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~~~d~~i~iw~~ 329 (708)
|+++++++++ .||.|++|++.+ ++ ......+.+|...|.+++|+ +.+|++++.||.|++|++
T Consensus 313 ~~~~~l~~~~g~~dg~i~v~~~~~--------~~------~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~ 378 (401)
T 4aez_A 313 PHSKEIMSTHGFPDNNLSIWSYSS--------SG------LTKQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFWRV 378 (401)
T ss_dssp SSSSEEEEEECTTTCEEEEEEEET--------TE------EEEEEEEECCSSCCCEEEECTTSSEEEEECTTSEEEEEEC
T ss_pred CCCCeEEEEeecCCCcEEEEecCC--------cc------ceeEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEEC
Confidence 9999999954 899999999987 42 33445577899999999999 889999999999999999
Q ss_pred CCCc
Q psy12614 330 PPKT 333 (708)
Q Consensus 330 ~~~~ 333 (708)
.+..
T Consensus 379 ~~~~ 382 (401)
T 4aez_A 379 YDGD 382 (401)
T ss_dssp CC--
T ss_pred CCCc
Confidence 8765
|
| >4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-35 Score=298.08 Aligned_cols=304 Identities=9% Similarity=0.033 Sum_probs=224.0
Q ss_pred ccCeEEEEEeCCCCEEEEEecC-------CeEEEEEccCCcccccCCCCCCCCc--ceEEeEEEeccccceEEEEEeCCE
Q psy12614 244 KKDILALTVSEDENYLYCAGVD-------PTVVCFQRTRKPQVCSTSGPEQGSS--VWVRSVNRVIHEGDVKSLALHGNR 314 (708)
Q Consensus 244 ~~~i~~~~~s~~~~~l~~~~~d-------g~i~iw~~~~~~~~~~~~g~~~~~~--~~~~~~~~~~~~~~v~~l~~~~~~ 314 (708)
..+|.+++|+||+++|++|+.+ +.|++|++.. +...... .......+..|...|.+++++++.
T Consensus 14 g~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~--------~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~~~~ 85 (365)
T 4h5i_A 14 GYPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDP--------TKDTEKEQFHILSEFALEDNDDSPTAIDASKGI 85 (365)
T ss_dssp SSCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECT--------TSSSHHHHEEEEEEEECCTTSCCCCEEEEETTE
T ss_pred CCCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcC--------CCcceeeeeeeeeEEEccCCCCceEEEEeCCCE
Confidence 4689999999999999998754 3599999987 3211111 112234567888899999999999
Q ss_pred EEEEcCCCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEEEcCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceE
Q psy12614 315 LYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRL 394 (708)
Q Consensus 315 l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (708)
++++..++..++|+.. .++.+++|++.... ....
T Consensus 86 ~~~g~~~~~~~l~s~~-----------------------------~d~~~r~~~~~~~~-----------------~~~~ 119 (365)
T 4h5i_A 86 ILVGCNENSTKITQGK-----------------------------GNKHLRKFKYDKVN-----------------DQLE 119 (365)
T ss_dssp EEEECCCCHHHHHHTS-----------------------------CCCCEEEEEEETTT-----------------TEEE
T ss_pred EEEEECCCccEEEEec-----------------------------CCCcEEEEEecCCC-----------------ceEE
Confidence 9988776655544332 23344555554432 0011
Q ss_pred EEEEE-----ecCCCceEEEEeCCCCcEEEE--E-cCCceEEEEEEecCCcceeEEeecCCcccccceeEEEEEecCCCe
Q psy12614 395 IVKMS-----AVNNATIRCSVVSNDGKYVAY--S-TESCVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVLISADSTL 466 (708)
Q Consensus 395 ~~~~~-----~~~~~~i~~~~~s~~g~~l~~--~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~ 466 (708)
..... ..+...+.+++|||||+++++ + .|++|+|||+.+ .. .... + .|.. .|.+++|+|||++
T Consensus 120 ~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~--~~-~~~~---~-~~~~--~V~~v~fspdg~~ 190 (365)
T 4h5i_A 120 FLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSD--LT-EKFE---I-ETRG--EVKDLHFSTDGKV 190 (365)
T ss_dssp EEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTT--TE-EEEE---E-ECSS--CCCEEEECTTSSE
T ss_pred EeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCC--Cc-EEEE---e-CCCC--ceEEEEEccCCce
Confidence 11111 123456889999999999875 3 389999999876 32 2222 2 2322 5777999999999
Q ss_pred EEEEecCCc-EEEecCCCeEEEEEecCCCCCccCcceEEEEECCCCcEEEEEecCC----eEEEEECCce------eeec
Q psy12614 467 LLAVSLNGP-LYIIDLSSLEIKYCVDPYKSNLMSDVISLVQMSECKQYIVCADRKS----HVVIWKNGQH------HASL 535 (708)
Q Consensus 467 l~~~~~dg~-i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~----~i~iw~~~~~------~~~~ 535 (708)
+++++.++. +|....+.. +... ...+| ...|.+++|+|+++++++++.|+ .+++|++... ...+
T Consensus 191 l~s~s~~~~~~~~~~~~~~--~~~~-~~~~~--~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~ 265 (365)
T 4h5i_A 191 VAYITGSSLEVISTVTGSC--IARK-TDFDK--NWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQV 265 (365)
T ss_dssp EEEECSSCEEEEETTTCCE--EEEE-CCCCT--TEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEE
T ss_pred EEeccceeEEEEEeccCcc--eeee-ecCCC--CCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeee
Confidence 999987777 777766632 2221 22345 77899999999999999999887 6888988722 2367
Q ss_pred CCCCCCceEEEEcCCCCEEEEEecCCcEEEEEcCCCCCCchhhhhhccCchh-hhcCCCCeeEEEeCCCCCceEEEEcCe
Q psy12614 536 PRYRKPSTAMAIHPTLSTLVTVYSDHRIVEFDLNRKAFTTFSRKLETNHPNE-WLSRQLPVLGIEFDPQDSSLIYLMDDS 614 (708)
Q Consensus 536 ~~~~~~v~~l~~s~d~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~l~~s~~~~~l~~~~~d~ 614 (708)
.+|...|++++|+|||++||+|+.|++|+|||+.++++. .. +.+|...|++|+|+|||++||+++.|+
T Consensus 266 ~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~-----------~~~~~gH~~~V~~v~fSpdg~~laS~S~D~ 334 (365)
T 4h5i_A 266 TNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMS-----------KIFKQAHSFAITEVTISPDSTYVASVSAAN 334 (365)
T ss_dssp ESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEE-----------EEETTSSSSCEEEEEECTTSCEEEEEETTS
T ss_pred cCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEE-----------EEecCcccCCEEEEEECCCCCEEEEEeCCC
Confidence 889999999999999999999999999999999998765 33 468999999999999999999999999
Q ss_pred eEEEEecCCCCC
Q psy12614 615 ALCVINKNKSLA 626 (708)
Q Consensus 615 ~i~~wd~~~~~~ 626 (708)
+|+|||+.....
T Consensus 335 tvrvw~ip~~~~ 346 (365)
T 4h5i_A 335 TIHIIKLPLNYA 346 (365)
T ss_dssp EEEEEECCTTTT
T ss_pred eEEEEEcCCCCc
Confidence 999999965443
|
| >2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-36 Score=314.07 Aligned_cols=317 Identities=10% Similarity=0.076 Sum_probs=227.2
Q ss_pred EcCCCCEEEEEeCCCcEEEEeCCCCCeE---EEEEecCCCCCcEEEEEEe-C-------CEEEEEcCCCcEEEEECCCCe
Q psy12614 34 CEPKSSRLAVSRADQSIEIWDISETPHV---DRVFIGDPLSNSIECLTWF-N-------DRLFSGGLQGFVNEYDMRRLN 102 (708)
Q Consensus 34 ~s~~~~~la~~~~dg~v~iwd~~~~~~~---~~~~~~h~~~~~v~~l~~~-~-------~~l~s~~~d~~i~vwd~~~~~ 102 (708)
.+|+++++|+++.|++|+|||+.+++.. ...+.+|. +.|.+++|+ . ++||+++.||+|++||+.++.
T Consensus 169 ~~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~--~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~ 246 (524)
T 2j04_B 169 LNEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSF--GEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNA 246 (524)
T ss_dssp -------------CEEEEEEEEETTTCCEEEEEEEEECC--CSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCS
T ss_pred cchhhhhhccCCCCceEEEEEccCCCCCceEEEEEEecC--CcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCc
Confidence 3688889999999999999999887642 12567788 899999999 3 599999999999999998764
Q ss_pred E-----------eEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEE--EECCCC-C
Q psy12614 103 I-----------KSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCT--AWHSSG-D 168 (708)
Q Consensus 103 ~-----------~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~--~~s~d~-~ 168 (708)
. ...+.+|...|++++|++++ .||+|+.||+|++||++++... ...+.+|...|.++ +|+|++ +
T Consensus 247 ~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~-~lasgs~DgtV~lWD~~~~~~~-~~~~~~H~~~V~sv~~~~s~~g~~ 324 (524)
T 2j04_B 247 TDVHVFKMCEKPSLTLSLADSLITTFDFLSPT-TVVCGFKNGFVAEFDLTDPEVP-SFYDQVHDSYILSVSTAYSDFEDT 324 (524)
T ss_dssp SSSSEEECCCSCSEEECCTTTCEEEEEESSSS-EEEEEETTSEEEEEETTBCSSC-SEEEECSSSCEEEEEEECCTTSCC
T ss_pred cccccceeecCceEEEEcCCCCEEEEEecCCC-eEEEEeCCCEEEEEECCCCCCc-eEEeecccccEEEEEEEcCCCCCe
Confidence 2 34678899999999999864 8999999999999999976432 14578899999999 678888 8
Q ss_pred EEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCeeEEEeeccccC
Q psy12614 169 YLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDVKTHKKD 246 (708)
Q Consensus 169 ~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~ 246 (708)
+||+++.| +|++||+++++.+..+.... ....+.+++|+|+++ +++++.|+.|++||++++.++..+.+|...
T Consensus 325 ~laS~S~D~tvklWD~~~~~~~~~~~~~~-----~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~ 399 (524)
T 2j04_B 325 VVSTVAVDGYFYIFNPKDIATTKTTVSRF-----RGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETT 399 (524)
T ss_dssp EEEEEETTSEEEEECGGGHHHHCEEEEEC-----SCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECSSC
T ss_pred EEEEeccCCeEEEEECCCCCccccccccc-----ccCcccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCCCc
Confidence 99999999 99999999888766554321 123478999999984 899999999999999999988888999999
Q ss_pred eEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEEEcCCCeE
Q psy12614 247 ILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSGGLDSYL 324 (708)
Q Consensus 247 i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~~~d~~i 324 (708)
|.+++|+|++++|++|+.||+|++||... +.-.. . .......+...+.+++|+ ++.+ ....+..+
T Consensus 400 V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~--------~~~~~---~-~~~~~~~~~~~v~~v~~sp~g~~~-~~~~~~~~ 466 (524)
T 2j04_B 400 ITAIGVSRLHPMVLAGSADGSLIITNAAR--------RLLHG---I-KNSSATQKSLRLWKWDYSIKDDKY-RIDSSYEV 466 (524)
T ss_dssp EEEEECCSSCCBCEEEETTTEEECCBSCS--------STTTC---C-------CCCCEEEECBCCSSSCEE-EECCCCCC
T ss_pred eEEEEeCCCCCeEEEEECCCEEEEEechH--------hhccc---c-ccCccceeeeEEEEeccCCCCCeE-EccCCcee
Confidence 99999999999999999999999999876 21000 0 000000122246678887 4433 33222223
Q ss_pred EEEeCCCCceeecCccCCCCceEEEEcCCc---EEEEE-cCCeEEEEEecCC
Q psy12614 325 SLSYYPPKTLVKYPCTLAQSTPVSLAKDIQ---HVLLQ-YTSHLELWSLGSA 372 (708)
Q Consensus 325 ~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~---~l~~~-~~~~i~i~~~~~~ 372 (708)
..|+..+..+..+.++...+.+++|+|++. .++++ .++.|+||++...
T Consensus 467 ~~~~~~g~~~~~l~gh~~~V~~Vafsp~~~~~~~lAsg~~~g~vrlw~l~~~ 518 (524)
T 2j04_B 467 YPLTVNDVSKAKIDAHGINITCTKWNETSAGGKCYAFSNSAGLLTLEYLSLE 518 (524)
T ss_dssp CC-------------CCCSCCCEEECCSTTTTTEEEEECTTSEEEEEECSCC
T ss_pred cccccCCcceeeecCCCceEEEEECCCCCCccHHHHhhccCceEEEEEcccc
Confidence 223333444556666677889999999964 88886 6699999998763
|
| >3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-33 Score=286.33 Aligned_cols=301 Identities=13% Similarity=0.172 Sum_probs=246.9
Q ss_pred EEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEc
Q psy12614 63 RVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQI 140 (708)
Q Consensus 63 ~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~ 140 (708)
..+.+|. ..|++++|+ +++|++++.||.|++||+.+++.+..+.+|.+.|.+++|+|++++|++++.|+.|++||+
T Consensus 26 ~~l~~h~--~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~ 103 (369)
T 3zwl_B 26 IKLTGHE--RPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDV 103 (369)
T ss_dssp EEEECCS--SCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEET
T ss_pred EEEEEee--ceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEEC
Confidence 4789999 999999999 899999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCcEEEEEecccccccEEEEEECCCCCEEEEecCC------eEEEEEcCCCceEEEEEeccc-------CCCCCceeEE
Q psy12614 141 SDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA------AVRVWDIHKGHAIHKMSLDKS-------SKFSKNTAVW 207 (708)
Q Consensus 141 ~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d------~i~iwd~~~~~~~~~~~~~~~-------~~~~~~~~v~ 207 (708)
.+++.. ..+. +...+.+++|+|+++++++++.+ .|.+||+..+.....+..... .+ .....+.
T Consensus 104 ~~~~~~--~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 179 (369)
T 3zwl_B 104 SNGQCV--ATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITH-EGLDAAT 179 (369)
T ss_dssp TTCCEE--EEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECC-TTCCCEE
T ss_pred CCCcEE--EEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCC-cCcccee
Confidence 999887 3444 78899999999999999988764 899999987643222221110 00 1123899
Q ss_pred EEEEccCCE-EEEEcCCCcEEEEeCCC-CeeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCC
Q psy12614 208 CVAFCADFT-IITGDSGGFVRFWDGKT-GVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGP 285 (708)
Q Consensus 208 ~~~~~~~~~-l~~~~~dg~i~~wd~~~-~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~ 285 (708)
+++|+|++. +++++.+|.|++||+.+ ++.+..+..|...|.+++|+|++++|++++.|+.|++||+.+ ++
T Consensus 180 ~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~--------~~ 251 (369)
T 3zwl_B 180 VAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVST--------LQ 251 (369)
T ss_dssp EEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT--------CC
T ss_pred EEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCC--------Cc
Confidence 999999995 88999999999999998 788889999999999999999999999999999999999998 65
Q ss_pred CCCCcceEEeEEEeccccceEEEEEe--CCEEEEEcCCCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEEEcCCe
Q psy12614 286 EQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSH 363 (708)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~ 363 (708)
....+. +...+.+++|+ +..+++++.++...+|...... ....
T Consensus 252 --------~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~--------------------------~~~~ 296 (369)
T 3zwl_B 252 --------VLKKYE-TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANE--------------------------GKFE 296 (369)
T ss_dssp --------EEEEEE-CSSCEEEEEECSSSSEEEEEECCC---------------------------------------CE
T ss_pred --------eeeeec-CCCCceeEEecCCCceEEEeecCCCceEEEEecCC--------------------------Ccce
Confidence 344443 77889999999 8999999998877666543211 1235
Q ss_pred EEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEEEc-CCceEEEEEEe
Q psy12614 364 LELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYST-ESCVRLHSLDL 433 (708)
Q Consensus 364 i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~-d~~i~i~~~~~ 433 (708)
+.+|+..+++ .......|...|.+++|+|++++|+++. ||.|++|++..
T Consensus 297 i~~~d~~~~~---------------------~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~ 346 (369)
T 3zwl_B 297 ARFYHKIFEE---------------------EIGRVQGHFGPLNTVAISPQGTSYASGGEDGFIRLHHFEK 346 (369)
T ss_dssp EEEEETTTCC---------------------EEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEEECH
T ss_pred eEEEecCCCc---------------------chhheecccCcEEEEEECCCCCEEEEEcCCCeEEEEECcc
Confidence 7888887755 3444567889999999999999999855 99999999986
|
| >1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-34 Score=329.13 Aligned_cols=479 Identities=10% Similarity=0.043 Sum_probs=346.5
Q ss_pred eeeeeccCCCCcEEEEEEcCCCCEEEEEeCC------CcEEEEeCCCCCeEEEEEecCCCCCcE-------EEEEEe--C
Q psy12614 17 HNIKFYAPEPKVINCIACEPKSSRLAVSRAD------QSIEIWDISETPHVDRVFIGDPLSNSI-------ECLTWF--N 81 (708)
Q Consensus 17 ~~~~~~~~h~~~v~~~~~s~~~~~la~~~~d------g~v~iwd~~~~~~~~~~~~~h~~~~~v-------~~l~~~--~ 81 (708)
...+.+.+|+..|.+++|||||++||+++.+ ..|.+||+.+++. +.+.+|. ..+ .+++|+ |
T Consensus 43 g~~~~lt~~~~~v~~~~~SPDG~~la~~s~~~~~~~~~~i~~~d~~~g~~--~~lt~~~--~~~~~~~~~~~~~~~SpDg 118 (1045)
T 1k32_A 43 GSTRKIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGEI--KRITYFS--GKSTGRRMFTDVAGFDPDG 118 (1045)
T ss_dssp CCEEEEECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTEE--EECCCCC--EEEETTEECSEEEEECTTC
T ss_pred CcEEEeeeCCCcccCeEECCCCCEEEEEEeeccCCCCCeEEEEECCCCCe--EEcccCC--CcccccccccccccCCCCC
Confidence 3456677899999999999999999987543 3799999988763 3788888 888 999999 7
Q ss_pred CEEEEEcCC------CcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeC------------CCcEEEEEccC-
Q psy12614 82 DRLFSGGLQ------GFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTE------------QGHINLFQISD- 142 (708)
Q Consensus 82 ~~l~s~~~d------~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~------------d~~i~iwd~~~- 142 (708)
+.+++++.+ ..|.+||+.+++....... ....++|+| | ++++++. +....+|....
T Consensus 119 ~ll~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~---~~~~~~~sp-G-~l~~~~~~~~~~~~~~~~g~~~~~lw~~~~~ 193 (1045)
T 1k32_A 119 NLIISTDAMQPFSSMTCLYRVENDGINFVPLNLG---PATHILFAD-G-RRVIGRNTFELPHWKGYRGGTRGKIWIEVNS 193 (1045)
T ss_dssp CEEEEECTTSSSTTCCEEEEEEGGGTEEEECCSC---SCSEEEEET-T-EEEEEESCSCCTTSTTCCSTTCCEEEEEEET
T ss_pred EEEEEECCcCCCcccceEEEEECCCCCeEEecCC---CcceeeeCC-C-EEEEeccCCCccccccccCCCcCCEEEECCC
Confidence 777777754 4688888888775433322 234677999 8 8888753 23456665433
Q ss_pred CcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCC-CceEEEEEecccCCCCCceeEEEEEEccCCE-EEE
Q psy12614 143 EGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHK-GHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IIT 219 (708)
Q Consensus 143 ~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~ 219 (708)
++. ..+.+|...+.++.|+++ ..+++++.+ .+.+|.+.. +.....+... ..+...+|+|||+ ++.
T Consensus 194 ~~~---~~l~~~~~~v~~~~~s~d-~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~--------~~~~~~~~SpDG~~la~ 261 (1045)
T 1k32_A 194 GAF---KKIVDMSTHVSSPVIVGH-RIYFITDIDGFGQIYSTDLDGKDLRKHTSF--------TDYYPRHLNTDGRRILF 261 (1045)
T ss_dssp TEE---EEEECCSSCCEEEEEETT-EEEEEECTTSSCEEEEEETTSCSCEECCCC--------CSSCEEEEEESSSCEEE
T ss_pred CCe---EECcCCCCcccceEEeCC-EEEEEEeccCceEEEEEeCCCCcceEecCC--------CCcceeeEcCCCCEEEE
Confidence 433 445889999999999988 566677777 888887653 3334443321 2345679999997 555
Q ss_pred EcCCCcEEEEeCCCCeeEEEeec-----------cccCeEEEEEe-CCCCEEEEEecCCeEEEEEccCCcccccCCCCCC
Q psy12614 220 GDSGGFVRFWDGKTGVQWSDVKT-----------HKKDILALTVS-EDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQ 287 (708)
Q Consensus 220 ~~~dg~i~~wd~~~~~~~~~~~~-----------~~~~i~~~~~s-~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~ 287 (708)
+ .++.|++||+... .+..+.. |...+.+++|+ |||++|++++ ++.+.+|+... ++
T Consensus 262 ~-~~~~i~~~d~~~~-~l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~--------~~-- 328 (1045)
T 1k32_A 262 S-KGGSIYIFNPDTE-KIEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSG--------TY-- 328 (1045)
T ss_dssp E-ETTEEEEECTTTC-CEEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTS--------SB--
T ss_pred E-eCCEEEEecCCce-EeeeeccCcccccccccccccccceeeecCCCCCEEEEEE-cCEEEEEcCCC--------Cc--
Confidence 5 6899999999544 3445544 34478999999 9999999887 78999999987 53
Q ss_pred CCcceEEeEEEecccc-ceEEEEEe-CCEEEEEcCCCeEE-EEeCCCCceeecCccCCCCceEEEEcCCcEEEEE-cCCe
Q psy12614 288 GSSVWVRSVNRVIHEG-DVKSLALH-GNRLYSGGLDSYLS-LSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQ-YTSH 363 (708)
Q Consensus 288 ~~~~~~~~~~~~~~~~-~v~~l~~~-~~~l~s~~~d~~i~-iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~-~~~~ 363 (708)
...+..|.. .+..++|+ ++.|++++.+..+. +|++.+.....+..+......++++|||+.++++ .++.
T Consensus 329 -------~~~~~~~~~~~~~~~~~sdg~~l~~~s~~~~l~~~~d~~~~~~~~l~~~~~~~~~~~~SpDG~~la~~~~~~~ 401 (1045)
T 1k32_A 329 -------VLKVPEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFE 401 (1045)
T ss_dssp -------EEECSCCSCEEEEEECSSSEEEEEEEETTEEEEEEEETTTCCEEECCCCCCSEEEEEECTTSSEEEEEETTSE
T ss_pred -------eEEccCCCcceEEeeeEcCCCeEEEEECCCceEEEEECCCCCceEecCCccceeeeEECCCCCEEEEECCCCe
Confidence 334556666 78888888 66788888888898 9999888766666344556789999999999874 7789
Q ss_pred EEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEEEc-C----------CceEEEEEE
Q psy12614 364 LELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYST-E----------SCVRLHSLD 432 (708)
Q Consensus 364 i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~-d----------~~i~i~~~~ 432 (708)
+.+||+.+++ +..+...+...+.+++|||||++|+++. + +.|++||+.
T Consensus 402 v~~~d~~tg~---------------------~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~ 460 (1045)
T 1k32_A 402 IMTVDLETGK---------------------PTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDME 460 (1045)
T ss_dssp EEEEETTTCC---------------------EEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETT
T ss_pred EEEEECCCCc---------------------eEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECC
Confidence 9999998765 3444446778889999999999998743 3 489999987
Q ss_pred ecCCcceeEEeecCCcccccceeEEEEEecCCCeEEEEecCCc--EEEecCCCe-----EEEEE----------------
Q psy12614 433 LDGDKPQISRIKNLPAPLFKSIFTHVLISADSTLLLAVSLNGP--LYIIDLSSL-----EIKYC---------------- 489 (708)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~~~~~dg~--i~~~~~~~~-----~~~~~---------------- 489 (708)
. +. ... +..+.. .+.+++|+|||++|++++.++. +|+....+. ..+..
T Consensus 461 ~--g~--~~~---l~~~~~--~~~~~~~spdG~~l~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 531 (1045)
T 1k32_A 461 G--RK--IFA---ATTENS--HDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPR 531 (1045)
T ss_dssp T--TE--EEE---CSCSSS--BEEEEEECTTSCEEEEEESCCCCCEECSSSSCEECCSCBEEEEEESSTTCCCGGGCCCG
T ss_pred C--Cc--EEE---eeCCCc--ccCCceEcCCCCEEEEEecccCCcCcchhccccccccCceeEEEEeCCCCCCccccCcC
Confidence 5 22 332 555543 4556899999999999887655 554322111 00000
Q ss_pred ----------e-------cCCCCCccCcceEEEEECCCCcEEEE-------------EecCCeEEEEECCceee-ecCCC
Q psy12614 490 ----------V-------DPYKSNLMSDVISLVQMSECKQYIVC-------------ADRKSHVVIWKNGQHHA-SLPRY 538 (708)
Q Consensus 490 ----------~-------~~~~~~~~~~~i~~~~~s~~~~~l~~-------------~~~d~~i~iw~~~~~~~-~~~~~ 538 (708)
+ .....+ ...+..++++|||+++++ ......|.+||+.+... .+.
T Consensus 532 ~~~~~~~~~d~~g~~~~~~~l~~~--~~~~~~~~~s~dg~~~~~~~~~g~~~~~~~~~~~~~~l~~~d~~~~~~~~l~-- 607 (1045)
T 1k32_A 532 SMTSEAGEYDLNDMYKRSSPINVD--PGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKVTEVK-- 607 (1045)
T ss_dssp GGSCCCCCCCCTTGGGGCEECSCC--CBCEEEEEECSSEEEEEECCCCCSHHHHHHCCCCCEEEEEEETTTCCEEEEE--
T ss_pred ccccccccccccCHhHceEEcCCC--CCChhheEEcCCCeEEEEecccCcccccccccCCCceEEEEECCCCcEEEee--
Confidence 0 001112 467889999999998885 12355788889885443 333
Q ss_pred CCCceEEEEcCCCCEEEEEecCCcEEEEEcCCCC
Q psy12614 539 RKPSTAMAIHPTLSTLVTVYSDHRIVEFDLNRKA 572 (708)
Q Consensus 539 ~~~v~~l~~s~d~~~l~~~~~dg~i~vwd~~~~~ 572 (708)
..+.+++|||||++|++++.+ .|++||+.+++
T Consensus 608 -~~v~~~~~S~DG~~l~~~~~~-~i~~~d~~~~~ 639 (1045)
T 1k32_A 608 -NNLTDLRLSADRKTVMVRKDD-GKIYTFPLEKP 639 (1045)
T ss_dssp -EEEEEEEECTTSCEEEEEETT-SCEEEEESSCT
T ss_pred -cCcceEEECCCCCEEEEEcCC-cEEEEeCccCc
Confidence 668899999999999988766 79999998876
|
| >3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-33 Score=278.11 Aligned_cols=286 Identities=15% Similarity=0.209 Sum_probs=244.9
Q ss_pred eCCCCCeEEEEEecCCCCCcEEEEEEe-CCEEEEEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCC
Q psy12614 54 DISETPHVDRVFIGDPLSNSIECLTWF-NDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQ 132 (708)
Q Consensus 54 d~~~~~~~~~~~~~h~~~~~v~~l~~~-~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d 132 (708)
|..++..+...+.+|. +.|.+++|. +++|++++.||.|++||+.+++....+..|...|.+++|+|++++|++++.|
T Consensus 3 d~~~~~~~~~~l~~h~--~~v~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 80 (313)
T 3odt_A 3 DPFTGYQLSATLKGHD--QDVRDVVAVDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKD 80 (313)
T ss_dssp --CCCCEEEEEECCCS--SCEEEEEEEETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETT
T ss_pred CccccHHHHHHhhCCC--CCcEEEEecCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCC
Confidence 4455555566999999 999999999 9999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEEccCC---cEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEE
Q psy12614 133 GHINLFQISDE---GLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWC 208 (708)
Q Consensus 133 ~~i~iwd~~~~---~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~ 208 (708)
+.|++|++... +.. ..+.+|...|.+++| ++++|++++.| .|++|| .++....+.. +...+.+
T Consensus 81 g~i~~~~~~~~~~~~~~--~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~~~~~~~~-------~~~~v~~ 147 (313)
T 3odt_A 81 TMINGVPLFATSGEDPL--YTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK--EGSLVYNLQA-------HNASVWD 147 (313)
T ss_dssp SCEEEEETTCCTTSCC---CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE--TTEEEEEEEC-------CSSCEEE
T ss_pred CeEEEEEeeecCCCCcc--cchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc--CCcEEEeccc-------CCCceeE
Confidence 99999998764 333 567889999999999 67899999999 999999 6666666653 3788999
Q ss_pred EEEcc-CC-EEEEEcCCCcEEEEeCCCCeeEEEeec-cccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCC
Q psy12614 209 VAFCA-DF-TIITGDSGGFVRFWDGKTGVQWSDVKT-HKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGP 285 (708)
Q Consensus 209 ~~~~~-~~-~l~~~~~dg~i~~wd~~~~~~~~~~~~-~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~ 285 (708)
++|.| ++ .+++++.||.|++|| .++....+.. |...+.+++|+|++. +++++.||.|++||+.+ ++
T Consensus 148 ~~~~~~~~~~l~~~~~d~~i~i~d--~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~--------~~ 216 (313)
T 3odt_A 148 AKVVSFSENKFLTASADKTIKLWQ--NDKVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHT--------GD 216 (313)
T ss_dssp EEEEETTTTEEEEEETTSCEEEEE--TTEEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTT--------CC
T ss_pred EEEccCCCCEEEEEECCCCEEEEe--cCceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCc--------hh
Confidence 99988 55 599999999999999 4666677776 899999999999997 99999999999999998 66
Q ss_pred CCCCcceEEeEEEeccccceEEEEEe-CCEEEEEcCCCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEEEcCCeE
Q psy12614 286 EQGSSVWVRSVNRVIHEGDVKSLALH-GNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHL 364 (708)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~v~~l~~~-~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i 364 (708)
....+..|...|.+++|+ ...+++++.|+.|++||+.+..
T Consensus 217 --------~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~v~iwd~~~~~------------------------------- 257 (313)
T 3odt_A 217 --------VLRTYEGHESFVYCIKLLPNGDIVSCGEDRTVRIWSKENGS------------------------------- 257 (313)
T ss_dssp --------EEEEEECCSSCEEEEEECTTSCEEEEETTSEEEEECTTTCC-------------------------------
T ss_pred --------hhhhhhcCCceEEEEEEecCCCEEEEecCCEEEEEECCCCc-------------------------------
Confidence 677788999999999999 4479999999999999886542
Q ss_pred EEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEEEcCCceEEEEEEec
Q psy12614 365 ELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYSTESCVRLHSLDLD 434 (708)
Q Consensus 365 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~d~~i~i~~~~~~ 434 (708)
.......+...|.+++|+|++++++++.|+.|++|++..+
T Consensus 258 ------------------------------~~~~~~~~~~~i~~~~~~~~~~~~~~~~dg~i~iw~~~~~ 297 (313)
T 3odt_A 258 ------------------------------LKQVITLPAISIWSVDCMSNGDIIVGSSDNLVRIFSQEKS 297 (313)
T ss_dssp ------------------------------EEEEEECSSSCEEEEEECTTSCEEEEETTSCEEEEESCGG
T ss_pred ------------------------------eeEEEeccCceEEEEEEccCCCEEEEeCCCcEEEEeCCCC
Confidence 2223335667899999999999777678999999999873
|
| >1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-34 Score=290.95 Aligned_cols=323 Identities=8% Similarity=0.048 Sum_probs=250.8
Q ss_pred EEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECCCCe--EeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEE
Q psy12614 64 VFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMRRLN--IKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQ 139 (708)
Q Consensus 64 ~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~~--~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd 139 (708)
.+..|. .+|.+++|+ +++|++++.|+.|++||+.+++ .+..+.+|...|.+++|+|++++|++++.|+.|++||
T Consensus 3 ~~~~~~--~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd 80 (372)
T 1k8k_C 3 YHSFLV--EPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWT 80 (372)
T ss_dssp EEESCS--SCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEE
T ss_pred eecccC--CCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEE
Confidence 455677 999999999 8899999999999999999988 8889999999999999999999999999999999999
Q ss_pred ccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-E
Q psy12614 140 ISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-I 217 (708)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l 217 (708)
+.+++......+..|...|.+++|+|++++|++++.+ .|++||+..+........... .+...|.+++|+|++. +
T Consensus 81 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~---~~~~~i~~~~~~~~~~~l 157 (372)
T 1k8k_C 81 LKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKK---PIRSTVLSLDWHPNSVLL 157 (372)
T ss_dssp EETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECT---TCCSCEEEEEECTTSSEE
T ss_pred CCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeec---ccCCCeeEEEEcCCCCEE
Confidence 9999876556678899999999999999999999999 999999998874322222211 3478899999999995 8
Q ss_pred EEEcCCCcEEEEeC------------------CCCeeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCccc
Q psy12614 218 ITGDSGGFVRFWDG------------------KTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQV 279 (708)
Q Consensus 218 ~~~~~dg~i~~wd~------------------~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~ 279 (708)
++++.||.|++||+ ..++.+..+..|...|.+++|+|++++|++++.|+.|++||+.+
T Consensus 158 ~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~---- 233 (372)
T 1k8k_C 158 AAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADK---- 233 (372)
T ss_dssp EEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGG----
T ss_pred EEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCC----
Confidence 99999999999995 46788889989999999999999999999999999999999998
Q ss_pred ccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEEEcCCCeEEEEeCCC--CceeecCccCCCCceEEEEcCCcE
Q psy12614 280 CSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSGGLDSYLSLSYYPP--KTLVKYPCTLAQSTPVSLAKDIQH 355 (708)
Q Consensus 280 ~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~--~~~~~~~~~~~~~~~~~~s~~~~~ 355 (708)
++ ....+..|...|.+++|+ +.+++++ .|+.+++|++.. +..............
T Consensus 234 ----~~--------~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~--------- 291 (372)
T 1k8k_C 234 ----KM--------AVATLASETLPLLAVTFITESSLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQS--------- 291 (372)
T ss_dssp ----TT--------EEEEEECSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC------------
T ss_pred ----Cc--------eeEEEccCCCCeEEEEEecCCCEEEEE-eCCeEEEEEccCcCceEEEeeccCccccc---------
Confidence 76 677888999999999999 5555554 999999999977 432221100000000
Q ss_pred EEEEcCCeEEEE---EecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeC-CCC---cEEEEE-cCCceE
Q psy12614 356 VLLQYTSHLELW---SLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVS-NDG---KYVAYS-TESCVR 427 (708)
Q Consensus 356 l~~~~~~~i~i~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s-~~g---~~l~~~-~d~~i~ 427 (708)
.......+.+| +..... . ..+.....+..+|...|.+++|. ++| .+|+++ .||.|+
T Consensus 292 -~~~~~~~~~~~~~~~~~~~~--------~-------~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~ 355 (372)
T 1k8k_C 292 -SQRGLTARERFQNLDKKASS--------E-------GSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMS 355 (372)
T ss_dssp ------CHHHHHHHCCCCC------------------------CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEE
T ss_pred -hhhhcchhhhhhhccccccc--------c-------cCccccccccccccCCcceeEEecCCCcceeeEEEecCCCceE
Confidence 00011112233 111100 0 00000022234788999999865 777 899985 599999
Q ss_pred EEEEEe
Q psy12614 428 LHSLDL 433 (708)
Q Consensus 428 i~~~~~ 433 (708)
+|++.+
T Consensus 356 ~W~~~~ 361 (372)
T 1k8k_C 356 IWDVRS 361 (372)
T ss_dssp EEEHHH
T ss_pred EEEecC
Confidence 999876
|
| >4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-33 Score=280.33 Aligned_cols=275 Identities=20% Similarity=0.260 Sum_probs=234.3
Q ss_pred EEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEe--cCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECCCCeEe
Q psy12614 29 INCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFI--GDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMRRLNIK 104 (708)
Q Consensus 29 v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~--~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~~~~ 104 (708)
.++|+||+++ +||+|. |++|+|||+.+++.+. .+. +|. ..|.+++|+ +++|++|+.||+|++||+++++++
T Consensus 28 ~~~l~WS~~~-~lAvg~-D~tV~iWd~~tg~~~~-~~~~~~~~--~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~ 102 (318)
T 4ggc_A 28 LNLVDWSSGN-VLAVAL-DNSVYLWSASSGDILQ-LLQMEQPG--EYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRL 102 (318)
T ss_dssp CBCEEECTTS-EEEEEE-TTEEEEEETTTCCEEE-EEECCSTT--CCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEE
T ss_pred ceEEEECCCC-EEEEEe-CCEEEEEECCCCCEEE-EEEecCCC--CeEEEEEECCCCCEEEEEECCCcEEEeecCCceeE
Confidence 4679999986 888876 8999999999998876 554 555 889999999 899999999999999999999999
Q ss_pred EEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEc
Q psy12614 105 SSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDI 183 (708)
Q Consensus 105 ~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~ 183 (708)
..+.+|...+.++.+ ++..+++++.++.+++|+........ ..+.+|...+..+.|++++++|++++.| .|++||+
T Consensus 103 ~~~~~h~~~~~~~~~--~~~~l~s~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~ 179 (318)
T 4ggc_A 103 RNMTSHSARVGSLSW--NSYILSSGSRSGHIHHHDVRVAEHHV-ATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPS 179 (318)
T ss_dssp EEEECCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEE-EEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEES
T ss_pred EEecCccceEEEeec--CCCEEEEEecCCceEeeecCCCceeE-EEEcCccCceEEEEEcCCCCEEEEEecCcceeEEEC
Confidence 999999998876555 56799999999999999988765442 6778899999999999999999999999 9999999
Q ss_pred CCCceEEEEEecccCCCCCceeEEEEEEccCCE----EEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEE
Q psy12614 184 HKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT----IITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYL 259 (708)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~----l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l 259 (708)
.+++.......... .+...|.+++++|++. +++++.++.|++||........... +...+..+.|+|+++.+
T Consensus 180 ~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~ 255 (318)
T 4ggc_A 180 APGEGGWVPLQTFT---QHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVD-AHSQVCSILWSPHYKEL 255 (318)
T ss_dssp SCBTTBSCCSEEEC---CCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEE-CSSCEEEEEEETTTTEE
T ss_pred CCCcccccceeeec---ccCCceEEEEecCCCCcEEEEEecCCCCEEEEEeccccccccccc-ceeeeeeeeecccccce
Confidence 88764322221111 3377899999999773 3467788999999998887766654 67889999999999988
Q ss_pred EEEe--cCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEEEcCCCeEEEEeCCC
Q psy12614 260 YCAG--VDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSGGLDSYLSLSYYPP 331 (708)
Q Consensus 260 ~~~~--~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~ 331 (708)
++++ .|+.|++||+.+ ++ ....+.+|.+.|++++|+ +.+|++++.|++|++||+.+
T Consensus 256 ~~~sg~~d~~i~iwd~~~--------~~--------~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~ 315 (318)
T 4ggc_A 256 ISGHGFAQNQLVIWKYPT--------MA--------KVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFE 315 (318)
T ss_dssp EEEECTTTCCEEEEETTT--------CC--------EEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSC
T ss_pred EEEEEcCCCEEEEEECCC--------Cc--------EEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCC
Confidence 8765 789999999998 76 778899999999999999 88999999999999999864
|
| >3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-34 Score=291.72 Aligned_cols=251 Identities=15% Similarity=0.211 Sum_probs=217.1
Q ss_pred eeeccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCC--CCeEEEEEecCCCCCcEEEEEEe----CCEEEEEcCCCc
Q psy12614 19 IKFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISE--TPHVDRVFIGDPLSNSIECLTWF----NDRLFSGGLQGF 92 (708)
Q Consensus 19 ~~~~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~--~~~~~~~~~~h~~~~~v~~l~~~----~~~l~s~~~d~~ 92 (708)
+..+.+|.+.|++++|+|++++||+|+.||.|+|||+.. ++.+ ..+.+|. ..|.+++|+ +++|++++.||.
T Consensus 4 ~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~-~~~~~h~--~~v~~~~~~~~~~~~~l~s~~~dg~ 80 (379)
T 3jrp_A 4 VVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLI-DTLTGHE--GPVWRVDWAHPKFGTILASCSYDGK 80 (379)
T ss_dssp -CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEE-EEECCCS--SCEEEEEECCGGGCSEEEEEETTSC
T ss_pred cEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceee-eEecCCC--CcEEEEEeCCCCCCCEEEEeccCCE
Confidence 456789999999999999999999999999999999984 3444 3788999 999999997 789999999999
Q ss_pred EEEEECCCCe--EeEEEeecCCceEEEEEecC--CCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECC---
Q psy12614 93 VNEYDMRRLN--IKSSTAVTSGTCWCLSVHKK--KRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHS--- 165 (708)
Q Consensus 93 i~vwd~~~~~--~~~~~~~~~~~v~~~~~s~~--~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~--- 165 (708)
|++||+.+++ .+..+..|...|.+++|+|+ +.+|++++.|+.|++||+.++.......+..|...|.+++|+|
T Consensus 81 v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 160 (379)
T 3jrp_A 81 VLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATI 160 (379)
T ss_dssp EEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC-
T ss_pred EEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCccc
Confidence 9999999987 77788889999999999999 9999999999999999999875443356778999999999999
Q ss_pred ----------CCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccC---CE-EEEEcCCCcEEEEe
Q psy12614 166 ----------SGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCAD---FT-IITGDSGGFVRFWD 230 (708)
Q Consensus 166 ----------d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~-l~~~~~dg~i~~wd 230 (708)
++.+|++++.| .|++||+.++........... .|...|.+++|+|+ +. +++++.||.|++||
T Consensus 161 ~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~---~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd 237 (379)
T 3jrp_A 161 EEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLE---GHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWT 237 (379)
T ss_dssp ---------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEEC---CCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEE
T ss_pred cccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEe---cccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEe
Confidence 69999999999 999999988764433322211 34889999999999 75 89999999999999
Q ss_pred CCCCe---eEEE--eeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccC
Q psy12614 231 GKTGV---QWSD--VKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTR 275 (708)
Q Consensus 231 ~~~~~---~~~~--~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~ 275 (708)
+.++. .... ...|...|.+++|+|++++|++++.||.|++|++..
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~ 287 (379)
T 3jrp_A 238 QDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 287 (379)
T ss_dssp ESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEE
T ss_pred CCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCC
Confidence 98864 2222 334888999999999999999999999999999986
|
| >3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-35 Score=305.16 Aligned_cols=357 Identities=10% Similarity=0.060 Sum_probs=258.8
Q ss_pred EEECCCCeEeEEE-eecCCceEEEEEec-CCCEEEEEeCCCcEEEEEccC---CcEEEEEecccccccEEEEEECCCCCE
Q psy12614 95 EYDMRRLNIKSST-AVTSGTCWCLSVHK-KKRLLAAGTEQGHINLFQISD---EGLLYEKLLDRQQGRILCTAWHSSGDY 169 (708)
Q Consensus 95 vwd~~~~~~~~~~-~~~~~~v~~~~~s~-~~~~la~~~~d~~i~iwd~~~---~~~~~~~~~~~~~~~v~~~~~s~d~~~ 169 (708)
.|+ .+++.+..+ .+|.+.|++++|+| ++++||+|+.||.|++||+.+ +..........|...|.+++|+|++++
T Consensus 47 ~w~-~~g~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 125 (437)
T 3gre_A 47 MGN-LRGKLIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDA 125 (437)
T ss_dssp GGG-CCCCEEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSE
T ss_pred ccc-ccceEEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCCE
Confidence 377 456778888 88999999999999 999999999999999999976 431100111258999999999999999
Q ss_pred EEEecCC-eEEEEEcC---CCceEEEEEecccCC--C-C--CceeEEEEE--EccCCE-EEEEcCCCcEEEEeCCCCeeE
Q psy12614 170 LVTGCAA-AVRVWDIH---KGHAIHKMSLDKSSK--F-S--KNTAVWCVA--FCADFT-IITGDSGGFVRFWDGKTGVQW 237 (708)
Q Consensus 170 l~~~~~d-~i~iwd~~---~~~~~~~~~~~~~~~--~-~--~~~~v~~~~--~~~~~~-l~~~~~dg~i~~wd~~~~~~~ 237 (708)
|++++.| .|++||+. +++............ + . +...+.++. +++++. +++++.||.|++||+++++.+
T Consensus 126 l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~ 205 (437)
T 3gre_A 126 FAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERL 205 (437)
T ss_dssp EEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEE
T ss_pred EEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeee
Confidence 9999999 99999995 555544333110000 0 0 255666666 557775 899999999999999999999
Q ss_pred EEeec--cccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEe-ccccceEEEEEe---
Q psy12614 238 SDVKT--HKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRV-IHEGDVKSLALH--- 311 (708)
Q Consensus 238 ~~~~~--~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~v~~l~~~--- 311 (708)
..+.+ |...|.+++|+|++++|++++.||.|++||++. ++ ....+. .|...|.+++++
T Consensus 206 ~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~--------~~--------~~~~~~~~~~~~v~~~~~~~~~ 269 (437)
T 3gre_A 206 QIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRF--------NV--------LIRSWSFGDHAPITHVEVCQFY 269 (437)
T ss_dssp EEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTT--------TE--------EEEEEBCTTCEEEEEEEECTTT
T ss_pred EEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCC--------cc--------EEEEEecCCCCceEEEEecccc
Confidence 99988 899999999999999999999999999999998 64 455554 777889999665
Q ss_pred ---CCEEEEEcCCCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEEEcCCeEEEEEecCCCCCCCCCCCCCCcccC
Q psy12614 312 ---GNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPL 388 (708)
Q Consensus 312 ---~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~ 388 (708)
+.+|++++.|+.|++||+.+..
T Consensus 270 s~~~~~l~s~~~dg~i~iwd~~~~~------------------------------------------------------- 294 (437)
T 3gre_A 270 GKNSVIVVGGSSKTFLTIWNFVKGH------------------------------------------------------- 294 (437)
T ss_dssp CTTEEEEEEESTTEEEEEEETTTTE-------------------------------------------------------
T ss_pred CCCccEEEEEcCCCcEEEEEcCCCc-------------------------------------------------------
Confidence 4488999999999998886543
Q ss_pred CCCceEEEEEEecCCCceEEEEeCCCCcEEEEEcCCceEEEEEEecCCcceeEEeecCCc--ccccceeEEEEEecCCCe
Q psy12614 389 LSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYSTESCVRLHSLDLDGDKPQISRIKNLPA--PLFKSIFTHVLISADSTL 466 (708)
Q Consensus 389 ~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~~~s~d~~~ 466 (708)
.......+...+..+.|+|+++.+ .+.. +.+ |.. .|++++|+ ++++
T Consensus 295 ------~~~~~~~~~~~~~~~~~~~~~~~l---~~~~--------------------~~~~~~~~--~v~~l~~~-~~~~ 342 (437)
T 3gre_A 295 ------CQYAFINSDEQPSMEHFLPIEKGL---EELN--------------------FCGIRSLN--ALSTISVS-NDKI 342 (437)
T ss_dssp ------EEEEEESSSSCCCGGGGSCBCSSG---GGCC--------------------CCCCCSGG--GGCCEEEE-TTEE
T ss_pred ------EEEEEEcCCCCCccceeccccccc---ccce--------------------ecccccCC--ceEEEEEC-CceE
Confidence 222333555666667777776544 0000 222 333 56668898 7788
Q ss_pred EEEEecCCc--EEEecCCCeEEEEEecCCCCCccCcceEEEEECCCCcEEEEEecCCeEEEEECC--ceeeecCCCCCCc
Q psy12614 467 LLAVSLNGP--LYIIDLSSLEIKYCVDPYKSNLMSDVISLVQMSECKQYIVCADRKSHVVIWKNG--QHHASLPRYRKPS 542 (708)
Q Consensus 467 l~~~~~dg~--i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~--~~~~~~~~~~~~v 542 (708)
|++++.|+. +|++..+ +....+..+... ...+....++++..+++.. |+.. ........|...|
T Consensus 343 l~s~~~d~~i~~wd~~~~--~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~h~~~I 410 (437)
T 3gre_A 343 LLTDEATSSIVMFSLNEL--SSSKAVISPSRF--SDVFIPTQVTANLTMLLRK--------MKRTSTHSVDDSLYHHDII 410 (437)
T ss_dssp EEEEGGGTEEEEEETTCG--GGCEEEECC--C--CCEEEEEEEETTEEEEEEE--------CC-------------CCCE
T ss_pred EEecCCCCeEEEEECCCc--ccceEEeccccc--CceEEEEEeecceEEEEEe--------cccccccccCcccccccce
Confidence 888988888 7777665 444555544333 5566777777776666555 1111 2223556799999
Q ss_pred eEEEEcCC--CCEEEEEecCCcEEEEE
Q psy12614 543 TAMAIHPT--LSTLVTVYSDHRIVEFD 567 (708)
Q Consensus 543 ~~l~~s~d--~~~l~~~~~dg~i~vwd 567 (708)
++++|+++ +.+|++++.||.|+||+
T Consensus 411 ~~i~~~~~~~~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 411 NSISTCEVDETPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp EEEEEEESSSSEEEEEEETTSCEEEEC
T ss_pred eeEeeeccCCceEEEEEcCCceEEEeC
Confidence 99999988 77999999999999995
|
| >1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-34 Score=289.26 Aligned_cols=280 Identities=15% Similarity=0.146 Sum_probs=239.9
Q ss_pred eeeeccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCC--eEEEEEecCCCCCcEEEEEEe--CC-EEEEEcCCCc
Q psy12614 18 NIKFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETP--HVDRVFIGDPLSNSIECLTWF--ND-RLFSGGLQGF 92 (708)
Q Consensus 18 ~~~~~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~--~~~~~~~~h~~~~~v~~l~~~--~~-~l~s~~~d~~ 92 (708)
...+..+|.+.|++++|+|++++||+|+.||.|+|||+.++. .....+.+|. ..|.+++|+ ++ +|++++.||.
T Consensus 3 ~~~~~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~~l~~~~~dg~ 80 (342)
T 1yfq_A 3 IVQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYK--HPLLCCNFIDNTDLQIYVGTVQGE 80 (342)
T ss_dssp EEECSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECS--SCEEEEEEEESSSEEEEEEETTSC
T ss_pred ceecccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecC--CceEEEEECCCCCcEEEEEcCCCe
Confidence 344567999999999999999999999999999999999877 1123566888 999999999 88 8999999999
Q ss_pred EEEEEC-CCCeEeEEEee--cCCceEEEEEecCCCEEEEEeCCCcEEEEEccC---------CcEEEEEecccccccEEE
Q psy12614 93 VNEYDM-RRLNIKSSTAV--TSGTCWCLSVHKKKRLLAAGTEQGHINLFQISD---------EGLLYEKLLDRQQGRILC 160 (708)
Q Consensus 93 i~vwd~-~~~~~~~~~~~--~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~---------~~~~~~~~~~~~~~~v~~ 160 (708)
|++||+ .+++. ..+.+ |...|.+++|+| +++|++++.|+.|++||+.+ ++.. ..+. |...|.+
T Consensus 81 i~~wd~~~~~~~-~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~--~~~~-~~~~v~~ 155 (342)
T 1yfq_A 81 ILKVDLIGSPSF-QALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNS--NNTK-VKNKIFT 155 (342)
T ss_dssp EEEECSSSSSSE-EECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCS--SSSS-SCCCEEE
T ss_pred EEEEEeccCCce-EeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCee--eEEe-eCCceEE
Confidence 999999 87755 67778 999999999999 99999999999999999987 5543 3444 8899999
Q ss_pred EEECCCCCEEEEecCC-eEEEEEcCC-CceEEEEEecccCCCCCceeEEEEEEcc-CCE-EEEEcCCCcEEEEeCCCC--
Q psy12614 161 TAWHSSGDYLVTGCAA-AVRVWDIHK-GHAIHKMSLDKSSKFSKNTAVWCVAFCA-DFT-IITGDSGGFVRFWDGKTG-- 234 (708)
Q Consensus 161 ~~~s~d~~~l~~~~~d-~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~-l~~~~~dg~i~~wd~~~~-- 234 (708)
++|+|++ +++++.+ .|++||+.+ +......... .+...+.+++|+| ++. +++++.+|.|++|+++..
T Consensus 156 ~~~~~~~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~-----~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~ 228 (342)
T 1yfq_A 156 MDTNSSR--LIVGMNNSQVQWFRLPLCEDDNGTIEES-----GLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGD 228 (342)
T ss_dssp EEECSSE--EEEEESTTEEEEEESSCCTTCCCEEEEC-----SCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCC
T ss_pred EEecCCc--EEEEeCCCeEEEEECCccccccceeeec-----CCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCc
Confidence 9999988 8888888 999999998 6543222222 3377899999999 885 899999999999999887
Q ss_pred ----eeEEEeecccc---------CeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEecc
Q psy12614 235 ----VQWSDVKTHKK---------DILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIH 301 (708)
Q Consensus 235 ----~~~~~~~~~~~---------~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 301 (708)
+....+..|.. .|.+++|+|++++|++++.||.|++||+.+ ++ ....+..|
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~--------~~--------~~~~~~~~ 292 (342)
T 1yfq_A 229 DYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQT--------RK--------KIKNFAKF 292 (342)
T ss_dssp STTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTT--------TE--------EEEECCCC
T ss_pred ccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCcc--------Hh--------Hhhhhhcc
Confidence 77778887765 999999999999999999999999999998 65 56778888
Q ss_pred -ccceEEEEEe-CCEEEEEcCCCe-EEEEe
Q psy12614 302 -EGDVKSLALH-GNRLYSGGLDSY-LSLSY 328 (708)
Q Consensus 302 -~~~v~~l~~~-~~~l~s~~~d~~-i~iw~ 328 (708)
...|.+++ . +.+|++++.||. .+.+.
T Consensus 293 h~~~v~~~~-~~~~~l~s~s~Dg~~~~~~~ 321 (342)
T 1yfq_A 293 NEDSVVKIA-CSDNILCLATSDDTFKTNAA 321 (342)
T ss_dssp SSSEEEEEE-ECSSEEEEEEECTHHHHCSS
T ss_pred cCCCceEec-CCCCeEEEEecCCccccccc
Confidence 99999999 6 999999999998 54444
|
| >4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-34 Score=294.10 Aligned_cols=331 Identities=16% Similarity=0.211 Sum_probs=241.2
Q ss_pred eeeeccCCCCcEEEEEEcC-CCCEEEEEeCCCcEEEEeCCCCCeEEEEE------------ecCCCCCcEEEEEEe---C
Q psy12614 18 NIKFYAPEPKVINCIACEP-KSSRLAVSRADQSIEIWDISETPHVDRVF------------IGDPLSNSIECLTWF---N 81 (708)
Q Consensus 18 ~~~~~~~h~~~v~~~~~s~-~~~~la~~~~dg~v~iwd~~~~~~~~~~~------------~~h~~~~~v~~l~~~---~ 81 (708)
..+++.+|.+.|++++|+| ++++||+|+.||.|+|||+.++....... .+|. ..|.+++|+ +
T Consensus 35 ~~~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~v~~~~~~~~~~ 112 (408)
T 4a11_B 35 DRDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHR--YSVETVQWYPHDT 112 (408)
T ss_dssp TEEECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCS--SCEEEEEECTTCT
T ss_pred ceeeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCC--CcEEEEEEccCCC
Confidence 3567889999999999999 99999999999999999999876543111 2588 999999998 6
Q ss_pred CEEEEEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEecC---CCEEEEEeCCCcEEEEEccCCcEEEEEecccccccE
Q psy12614 82 DRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKK---KRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRI 158 (708)
Q Consensus 82 ~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~---~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v 158 (708)
.+|++++.||.|++||+.+++....+. +...+.+++++|. +.++++++.|+.|++||+.+++.. ..+..|...|
T Consensus 113 ~~l~s~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~--~~~~~~~~~v 189 (408)
T 4a11_B 113 GMFTSSSFDKTLKVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCS--HILQGHRQEI 189 (408)
T ss_dssp TCEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCC--EEECCCCSCE
T ss_pred cEEEEEeCCCeEEEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCccee--eeecCCCCcE
Confidence 789999999999999999999888876 6788999999985 449999999999999999988876 6788899999
Q ss_pred EEEEECCCCC-EEEEecCC-eEEEEEcCCCc-eEEEEEeccc--------CCCCCceeEEEEEEccCCE-EEEEcCCCcE
Q psy12614 159 LCTAWHSSGD-YLVTGCAA-AVRVWDIHKGH-AIHKMSLDKS--------SKFSKNTAVWCVAFCADFT-IITGDSGGFV 226 (708)
Q Consensus 159 ~~~~~s~d~~-~l~~~~~d-~i~iwd~~~~~-~~~~~~~~~~--------~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i 226 (708)
.+++|+|+++ .|++++.| .|++||++++. .+..+..... ....+...|.+++|+|+++ +++++.||.|
T Consensus 190 ~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i 269 (408)
T 4a11_B 190 LAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRM 269 (408)
T ss_dssp EEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred EEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeE
Confidence 9999999998 58899999 99999998776 3333311100 0003478899999999995 9999999999
Q ss_pred EEEeCCCCeeEEEeecc-----ccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEecc
Q psy12614 227 RFWDGKTGVQWSDVKTH-----KKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIH 301 (708)
Q Consensus 227 ~~wd~~~~~~~~~~~~~-----~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 301 (708)
++||+.+++....+..+ ...+........+..+++++.++.|++||+.+ ++ ....+.+|
T Consensus 270 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~--------~~--------~~~~~~~~ 333 (408)
T 4a11_B 270 RLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYS--------GE--------QITMLKGH 333 (408)
T ss_dssp EEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTT--------CC--------EEEEECCC
T ss_pred EEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcC--------Cc--------ceeeeccC
Confidence 99999988765544322 12222233334456677778899999999998 76 67888899
Q ss_pred ccceEEEEEe--CCEEEEEcCCCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEE--EEEcCCeEEEEEecC
Q psy12614 302 EGDVKSLALH--GNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHV--LLQYTSHLELWSLGS 371 (708)
Q Consensus 302 ~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l--~~~~~~~i~i~~~~~ 371 (708)
...|.+++|+ +.+|++++.||.|++|++.+....... ........+.+..... ....++.+++|+...
T Consensus 334 ~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~ 405 (408)
T 4a11_B 334 YKTVDCCVFQSNFQELYSGSRDCNILAWVPSLYEPVPDD--DETTTKSQLNPAFEDAWSSSDEEGGTSAWSHPQ 405 (408)
T ss_dssp SSCEEEEEEETTTTEEEEEETTSCEEEEEECC------------------------------------------
T ss_pred CCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCCccCCC--CceEeccccccccceeecccCccCceeecCCcc
Confidence 9999999999 889999999999999999887633222 1111222233332222 235778899997653
|
| >4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-33 Score=290.96 Aligned_cols=276 Identities=20% Similarity=0.273 Sum_probs=236.1
Q ss_pred EEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEe--cCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECCCCeEe
Q psy12614 29 INCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFI--GDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMRRLNIK 104 (708)
Q Consensus 29 v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~--~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~~~~ 104 (708)
++.|+||++ ++||+|. |++|+|||..+++... .+. +|. ..|++|+|+ |++|++|+.||+|++||+++++++
T Consensus 108 ~~~l~wS~~-n~lAvgl-d~tV~lWd~~tg~~~~-~~~~~~~~--~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~ 182 (420)
T 4gga_A 108 LNLVDWSSG-NVLAVAL-DNSVYLWSASSGDILQ-LLQMEQPG--EYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRL 182 (420)
T ss_dssp CBCEEECTT-SEEEEEE-TTEEEEEETTTCCEEE-EEECCSTT--CCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEE
T ss_pred ceeEEECCC-CEEEEEe-CCEEEEEECCCCCEEE-EEEecCCC--CcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEE
Confidence 456999976 5888886 8899999999998775 554 566 889999999 999999999999999999999999
Q ss_pred EEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEc
Q psy12614 105 SSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDI 183 (708)
Q Consensus 105 ~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~ 183 (708)
..+.+|...+.+++++ +..|++|+.|+.+++||........ ..+.+|...+..+.|+|+++++++++.| .+++|+.
T Consensus 183 ~~~~~h~~~v~~~s~~--~~~l~sgs~d~~i~~~d~~~~~~~~-~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~ 259 (420)
T 4gga_A 183 RNMTSHSARVGSLSWN--SYILSSGSRSGHIHHHDVRVAEHHV-ATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPS 259 (420)
T ss_dssp EEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCEE-EEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEES
T ss_pred EEEeCCCCceEEEeeC--CCEEEEEeCCCceeEeeecccceee-EEecccccceeeeeecCCCCeeeeeeccccceEEee
Confidence 9999999999988775 6799999999999999998755432 6788999999999999999999999999 9999999
Q ss_pred CCCceEEEEEecccCCCCCceeEEEEEEccCCE--EE--EEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEE
Q psy12614 184 HKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT--II--TGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYL 259 (708)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--l~--~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l 259 (708)
.+++.......... .+...|.+++|+|++. ++ +|+.|+.|++||+.+++....+..+ ..+.++.|+|+++.+
T Consensus 260 ~~~~~~~~~~~~~~---~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~-~~v~~~~~~~~~~~l 335 (420)
T 4gga_A 260 APGEGGWVPLQTFT---QHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAH-SQVCSILWSPHYKEL 335 (420)
T ss_dssp SCCSSCSCCSEEEC---CCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECS-SCEEEEEEETTTTEE
T ss_pred ccccccceeeeeec---ccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeeccc-cceeeeeecCCCCeE
Confidence 87753221111111 3478899999999773 44 3567999999999999999888754 678999999999999
Q ss_pred EEEe--cCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEEEcCCCeEEEEeCCCC
Q psy12614 260 YCAG--VDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSGGLDSYLSLSYYPPK 332 (708)
Q Consensus 260 ~~~~--~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~~ 332 (708)
++++ .|+.|++||+.+ ++ ....+.+|.+.|.+++|+ +.+|++++.|++|++||+.+.
T Consensus 336 v~~sg~~d~~I~iwd~~~--------~~--------~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~~ 396 (420)
T 4gga_A 336 ISGHGFAQNQLVIWKYPT--------MA--------KVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFEL 396 (420)
T ss_dssp EEEECTTTCCEEEEETTT--------CC--------EEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCS
T ss_pred EEEEecCCCEEEEEECCC--------Cc--------EEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCC
Confidence 8765 689999999998 76 778899999999999999 889999999999999998654
|
| >3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-34 Score=289.89 Aligned_cols=280 Identities=14% Similarity=0.119 Sum_probs=230.3
Q ss_pred EEEecCCCCCcEEEEEEe--C-CEEEEEcCCCcEEEEECCCCeEeEEEe--ecCCceEEEEEec-CCCEEEEEeCCCcEE
Q psy12614 63 RVFIGDPLSNSIECLTWF--N-DRLFSGGLQGFVNEYDMRRLNIKSSTA--VTSGTCWCLSVHK-KKRLLAAGTEQGHIN 136 (708)
Q Consensus 63 ~~~~~h~~~~~v~~l~~~--~-~~l~s~~~d~~i~vwd~~~~~~~~~~~--~~~~~v~~~~~s~-~~~~la~~~~d~~i~ 136 (708)
..+.+|. ..|.+++|+ + ++|++++.||.|++||+.+++....+. +|.+.|.+++|+| ++++|++++.|+.|+
T Consensus 67 ~~~~~h~--~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~ 144 (383)
T 3ei3_B 67 RTASPFD--RRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATT 144 (383)
T ss_dssp EEECCCS--SCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEE
T ss_pred EeccCCC--CCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEE
Confidence 4889999 999999999 5 799999999999999999988777765 6999999999999 789999999999999
Q ss_pred EEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCC
Q psy12614 137 LFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADF 215 (708)
Q Consensus 137 iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 215 (708)
+||+.+...........|...|.+++|+|++++|++++.| .|++||+ +++.+..+.. |...|.+++|+|++
T Consensus 145 iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~-------h~~~v~~~~~~~~~ 216 (383)
T 3ei3_B 145 LRDFSGSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKL-------HKAKVTHAEFNPRC 216 (383)
T ss_dssp EEETTSCEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEEC-------SSSCEEEEEECSSC
T ss_pred EEECCCCceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEecc-------CCCcEEEEEECCCC
Confidence 9999976554333334456889999999999999999999 9999999 5777777653 38899999999998
Q ss_pred E--EEEEcCCCcEEEEeCCC----CeeEEEeeccccCeEEEEEeC-CCCEEEEEecCCeEEEEEccCCcccccCCCCCCC
Q psy12614 216 T--IITGDSGGFVRFWDGKT----GVQWSDVKTHKKDILALTVSE-DENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQG 288 (708)
Q Consensus 216 ~--l~~~~~dg~i~~wd~~~----~~~~~~~~~~~~~i~~~~~s~-~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~ 288 (708)
. +++++.|+.|++||+++ +..+..+ +|...|.+++|+| ++++|++++.|+.|++||+.+ ++
T Consensus 217 ~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~--------~~--- 284 (383)
T 3ei3_B 217 DWLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYD--------WS--- 284 (383)
T ss_dssp TTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTB--------TT---
T ss_pred CCEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCC--------Cc---
Confidence 4 88999999999999987 5666666 6999999999999 999999999999999999988 43
Q ss_pred CcceEEeEEEecc-------c----------cceEEEEEe--CCEEEEEcCCCeEEEEeCCCCce-eecCcc--CCCCce
Q psy12614 289 SSVWVRSVNRVIH-------E----------GDVKSLALH--GNRLYSGGLDSYLSLSYYPPKTL-VKYPCT--LAQSTP 346 (708)
Q Consensus 289 ~~~~~~~~~~~~~-------~----------~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~~~~-~~~~~~--~~~~~~ 346 (708)
....+..| . ..+..++++ +.+ +++.|+.|++||+.+... ..+..+ ......
T Consensus 285 -----~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~ 357 (383)
T 3ei3_B 285 -----KPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGLVHQLRDPNAAGIISL 357 (383)
T ss_dssp -----SCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCEEEEECBTTBCSCCCE
T ss_pred -----cccccccccccccccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCceeeeecCCCCCceEEE
Confidence 11222222 1 334445555 333 778999999999987763 444432 334456
Q ss_pred EEEEcCCcEEEEEcCCeEEEEEecC
Q psy12614 347 VSLAKDIQHVLLQYTSHLELWSLGS 371 (708)
Q Consensus 347 ~~~s~~~~~l~~~~~~~i~i~~~~~ 371 (708)
++|+|++++|+++.++.|++|++.+
T Consensus 358 ~~~s~~g~~l~s~sd~~i~iw~~~~ 382 (383)
T 3ei3_B 358 NKFSPTGDVLASGMGFNILIWNRED 382 (383)
T ss_dssp EEECTTSSEEEEEETTEEEEEECC-
T ss_pred EEEecCccEEEEecCCcEEEEecCC
Confidence 7999999999998899999999875
|
| >3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-35 Score=296.49 Aligned_cols=347 Identities=11% Similarity=0.088 Sum_probs=229.8
Q ss_pred EEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcC
Q psy12614 106 STAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIH 184 (708)
Q Consensus 106 ~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~ 184 (708)
.+..+.+.|++++|+|++++||+++.|+.|++||+.++.......+.+|...|.+++|+|++++|++++.| .|++||+.
T Consensus 6 ~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~ 85 (377)
T 3dwl_C 6 VLHILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKR 85 (377)
T ss_dssp EEEECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC---
T ss_pred eEecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcC
Confidence 34456789999999999999999999999999999988433337888999999999999999999999999 99999999
Q ss_pred CCc---eEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCe---eEEEeec-cccCeEEEEEeCCC
Q psy12614 185 KGH---AIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGV---QWSDVKT-HKKDILALTVSEDE 256 (708)
Q Consensus 185 ~~~---~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~---~~~~~~~-~~~~i~~~~~s~~~ 256 (708)
+++ ....+. .+...|.+++|+|+++ +++++.|+.|++||+++++ ....+.. |...|.+++|+|++
T Consensus 86 ~~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 158 (377)
T 3dwl_C 86 PDGTWKQTLVLL-------RLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNN 158 (377)
T ss_dssp ---CCCCEEECC-------CCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTS
T ss_pred CCCceeeeeEec-------ccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCC
Confidence 877 333332 4488999999999995 9999999999999999887 3677777 99999999999999
Q ss_pred CEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEeCCEEEEEcCCCeEEEEeCCCCceee
Q psy12614 257 NYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALHGNRLYSGGLDSYLSLSYYPPKTLVK 336 (708)
Q Consensus 257 ~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~s~~~d~~i~iw~~~~~~~~~ 336 (708)
++|++++.|+.|++||+.. ++. ..... .. .|..
T Consensus 159 ~~l~~~~~d~~i~iwd~~~--------~~~--------~~~~~---~~---------------------~~~~------- 191 (377)
T 3dwl_C 159 VLLAAGCADRKAYVLSAYV--------RDV--------DAKPE---AS---------------------VWGS------- 191 (377)
T ss_dssp SEEEEEESSSCEEEEEECC--------SSC--------C-CCC---SC---------------------SSCS-------
T ss_pred CEEEEEeCCCEEEEEEEEe--------ccc--------CCCcc---cc---------------------cccc-------
Confidence 9999999999999999976 320 00000 00 0000
Q ss_pred cCccCCCCceEEEEcCCcEEEEEcCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCc
Q psy12614 337 YPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGK 416 (708)
Q Consensus 337 ~~~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~ 416 (708)
.. ....+.... .|...|.+++|+|+|+
T Consensus 192 ---------------------------------~~-------------------~~~~~~~~~-~~~~~v~~~~~sp~~~ 218 (377)
T 3dwl_C 192 ---------------------------------RL-------------------PFNTVCAEY-PSGGWVHAVGFSPSGN 218 (377)
T ss_dssp ---------------------------------CC-------------------CEEEEEECC-CCSSSEEEEEECTTSS
T ss_pred ---------------------------------cc-------------------chhhhhhcc-cCCceEEEEEECCCCC
Confidence 00 001222222 6778899999999999
Q ss_pred EEEEE-cCCceEEEEEEecCCcceeEEeecCCcccccceeEEEEEecCCCeEEEEecCCc-EEEecCCCeEEEEEecCCC
Q psy12614 417 YVAYS-TESCVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVLISADSTLLLAVSLNGP-LYIIDLSSLEIKYCVDPYK 494 (708)
Q Consensus 417 ~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~~~~~dg~-i~~~~~~~~~~~~~~~~~~ 494 (708)
+|+++ .|+.|++||+..... ....+..+..|.. .|++++|+|++++|++++.++. +|.......+....+....
T Consensus 219 ~l~~~~~d~~i~iwd~~~~~~--~~~~~~~~~~~~~--~v~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (377)
T 3dwl_C 219 ALAYAGHDSSVTIAYPSAPEQ--PPRALITVKLSQL--PLRSLLWANESAIVAAGYNYSPILLQGNESGWAHTRDLDAGT 294 (377)
T ss_dssp CEEEEETTTEEC-CEECSTTS--CEEECCCEECSSS--CEEEEEEEETTEEEEEESSSSEEEECCCC---CCSBCCCSCC
T ss_pred EEEEEeCCCcEEEEECCCCCC--cceeeEeecCCCC--ceEEEEEcCCCCEEEEEcCCcEEEEEeCCCceEEEeeecccc
Confidence 99985 599999999997443 1222223555644 7888999999999999987777 7776644322222332211
Q ss_pred CCcc----------CcceEEEEECCCCcEEEEEecCCeEEEEECCceeeecCCCCCCceEEEEcCCC-C---EEEEEecC
Q psy12614 495 SNLM----------SDVISLVQMSECKQYIVCADRKSHVVIWKNGQHHASLPRYRKPSTAMAIHPTL-S---TLVTVYSD 560 (708)
Q Consensus 495 ~~~~----------~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~v~~l~~s~d~-~---~l~~~~~d 560 (708)
.... ......+.|++....+......+... ........|...|+++++.++. . .|++++.|
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-----~~~~~~~~H~~~i~~~~~~~~~~~~~~~~~s~g~D 369 (377)
T 3dwl_C 295 SKTSFTHTGNTGEGREEEGPVSFTALRSTFRNMDLKGSSQ-----SISSLPTVHQNMIATLRPYAGTPGNITAFTSSGTD 369 (377)
T ss_dssp CCCCBSSSSSBCCCCCC------------------------------CCCSSSCSSCEEEEEEEEEETTEEEEEEEEETT
T ss_pred cccccccccccccccccccccccccccccccchhhccccc-----cccccCccccceeEEEeccCCCCCceEEEEeecCC
Confidence 1100 01144444544433333222222211 1122456799999999976543 3 69999999
Q ss_pred CcEEEEEc
Q psy12614 561 HRIVEFDL 568 (708)
Q Consensus 561 g~i~vwd~ 568 (708)
|.|++||+
T Consensus 370 g~i~iWdl 377 (377)
T 3dwl_C 370 GRVVLWTL 377 (377)
T ss_dssp SEEEEECC
T ss_pred CcEEEecC
Confidence 99999985
|
| >3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-33 Score=282.85 Aligned_cols=250 Identities=15% Similarity=0.220 Sum_probs=216.6
Q ss_pred eeeccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCC---eEEEEEecCCCCCcEEEEEEe----CCEEEEEcCCC
Q psy12614 19 IKFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETP---HVDRVFIGDPLSNSIECLTWF----NDRLFSGGLQG 91 (708)
Q Consensus 19 ~~~~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~---~~~~~~~~h~~~~~v~~l~~~----~~~l~s~~~d~ 91 (708)
.+++.+|.+.|++++|+|++++||+|+.||.|+|||+.++. .....+.+|. ..|.+++|+ +++|++++.||
T Consensus 4 ~~~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~--~~v~~~~~~~~~d~~~l~s~~~dg 81 (351)
T 3f3f_A 4 QPFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHD--SSIVAIDWASPEYGRIIASASYDK 81 (351)
T ss_dssp CCEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCS--SCEEEEEECCGGGCSEEEEEETTS
T ss_pred cccCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCC--CcEEEEEEcCCCCCCEEEEEcCCC
Confidence 45788999999999999999999999999999999999764 2334788999 999999998 68999999999
Q ss_pred cEEEEECCCC---------eEeEEEeecCCceEEEEEecC--CCEEEEEeCCCcEEEEEccCCcEEEE-------E----
Q psy12614 92 FVNEYDMRRL---------NIKSSTAVTSGTCWCLSVHKK--KRLLAAGTEQGHINLFQISDEGLLYE-------K---- 149 (708)
Q Consensus 92 ~i~vwd~~~~---------~~~~~~~~~~~~v~~~~~s~~--~~~la~~~~d~~i~iwd~~~~~~~~~-------~---- 149 (708)
.|++||+.++ +++..+..|.+.|.+++|+|+ +++|++++.|+.|++||+.+++.... .
T Consensus 82 ~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~ 161 (351)
T 3f3f_A 82 TVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSI 161 (351)
T ss_dssp CEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSC
T ss_pred eEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhcccccccccccccc
Confidence 9999999987 668888899999999999999 99999999999999999987764210 0
Q ss_pred ecccccccEEEEEECCC---CCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCC----E-EEEE
Q psy12614 150 LLDRQQGRILCTAWHSS---GDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADF----T-IITG 220 (708)
Q Consensus 150 ~~~~~~~~v~~~~~s~d---~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~----~-l~~~ 220 (708)
....|...+.+++|+|+ +.++++++.+ .+.+|+...++........ .|...|.+++|+|++ . ++++
T Consensus 162 ~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-----~h~~~i~~~~~~p~~~~~~~~l~s~ 236 (351)
T 3f3f_A 162 PPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLP-----GHKSLIRSISWAPSIGRWYQLIATG 236 (351)
T ss_dssp CCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECC-----CCCSCEEEEEECCCSSCSSEEEEEE
T ss_pred ccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecC-----CCCcceeEEEECCCCCCcceEEEEE
Confidence 11257788999999997 8999999999 8888887777653333332 448899999999997 5 8999
Q ss_pred cCCCcEEEEeCCCC----------------------------------------------eeEEEeeccccCeEEEEEeC
Q psy12614 221 DSGGFVRFWDGKTG----------------------------------------------VQWSDVKTHKKDILALTVSE 254 (708)
Q Consensus 221 ~~dg~i~~wd~~~~----------------------------------------------~~~~~~~~~~~~i~~~~~s~ 254 (708)
+.||.|++||++++ +.+..+.+|...|.+++|+|
T Consensus 237 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~ 316 (351)
T 3f3f_A 237 CKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNL 316 (351)
T ss_dssp ETTSCEEEEEEEECC---------------------------------------CCSEEEEEEEEECTTSSCEEEEEECS
T ss_pred cCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcC
Confidence 99999999999765 56777888999999999999
Q ss_pred CCCEEEEEecCCeEEEEEccC
Q psy12614 255 DENYLYCAGVDPTVVCFQRTR 275 (708)
Q Consensus 255 ~~~~l~~~~~dg~i~iw~~~~ 275 (708)
++++|++++.||.|++|++.+
T Consensus 317 ~~~~l~s~~~dg~v~iw~~~~ 337 (351)
T 3f3f_A 317 TGTILSSAGDDGKVRLWKATY 337 (351)
T ss_dssp SSCCEEEEETTSCEEEEEECT
T ss_pred CCCEEEEecCCCcEEEEecCc
Confidence 999999999999999999998
|
| >3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-33 Score=284.99 Aligned_cols=316 Identities=15% Similarity=0.199 Sum_probs=244.0
Q ss_pred CCCeEEEEEecCCCCCcEEEEEEe--CCEE-EEEcC---CCcEEEEECCCCeEeEEEe-ecCCceEEEEEecC---CCEE
Q psy12614 57 ETPHVDRVFIGDPLSNSIECLTWF--NDRL-FSGGL---QGFVNEYDMRRLNIKSSTA-VTSGTCWCLSVHKK---KRLL 126 (708)
Q Consensus 57 ~~~~~~~~~~~h~~~~~v~~l~~~--~~~l-~s~~~---d~~i~vwd~~~~~~~~~~~-~~~~~v~~~~~s~~---~~~l 126 (708)
..+.+...+.+|. ..|.+++|+ +..+ ++++. |+.|++||+.+++...... +|...|.+++|+|+ +++|
T Consensus 6 ~~~~~~~~~~~h~--~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l 83 (357)
T 3i2n_A 6 KPQIIAHIQKGFN--YTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYL 83 (357)
T ss_dssp CCCEEEEEEEECS--SCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCE
T ss_pred hhHHhhhhccCCC--CceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceE
Confidence 4455666788999 999999999 5455 56665 9999999999988765543 79999999999999 6999
Q ss_pred EEEeCCCcEEEEEccCCc-EEEEEecccccccEEEEE------ECCCCCEEEEecCC-eEEEEEcCCCc-eEEEEEeccc
Q psy12614 127 AAGTEQGHINLFQISDEG-LLYEKLLDRQQGRILCTA------WHSSGDYLVTGCAA-AVRVWDIHKGH-AIHKMSLDKS 197 (708)
Q Consensus 127 a~~~~d~~i~iwd~~~~~-~~~~~~~~~~~~~v~~~~------~s~d~~~l~~~~~d-~i~iwd~~~~~-~~~~~~~~~~ 197 (708)
++++.||.|++||+.+++ .. ..+.+|...|.+++ |+|++++|++++.| .|++||+.+++ .+..+.....
T Consensus 84 ~~~~~dg~i~iwd~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~ 161 (357)
T 3i2n_A 84 ATGDFGGNLHIWNLEAPEMPV--YSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQG 161 (357)
T ss_dssp EEEETTSCEEEECTTSCSSCS--EEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTT
T ss_pred EEecCCCeEEEEeCCCCCccE--EEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCC
Confidence 999999999999999887 54 67889999999995 57899999999999 99999999887 6666654321
Q ss_pred CCCCCceeEEEEE----EccCCE-EEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeC---CCCEEEEEecCCeEE
Q psy12614 198 SKFSKNTAVWCVA----FCADFT-IITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSE---DENYLYCAGVDPTVV 269 (708)
Q Consensus 198 ~~~~~~~~v~~~~----~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~---~~~~l~~~~~dg~i~ 269 (708)
.. ...+.+++ |+|++. +++++.||.|++||+++++.... ..|...|.+++|+| ++++|++++.||.|+
T Consensus 162 ~~---~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~ 237 (357)
T 3i2n_A 162 EN---KRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWE-TNIKNGVCSLEFDRKDISMNKLVATSLEGKFH 237 (357)
T ss_dssp SC---CCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEE-EECSSCEEEEEESCSSSSCCEEEEEESTTEEE
T ss_pred CC---CCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeee-cCCCCceEEEEcCCCCCCCCEEEEECCCCeEE
Confidence 11 44788888 678885 88999999999999999887554 55889999999999 999999999999999
Q ss_pred EEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CC-EEEEEcCCCeEEEEeCCCCceeecCccCCCCce
Q psy12614 270 CFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GN-RLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTP 346 (708)
Q Consensus 270 iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~-~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~ 346 (708)
+||+.+ ++ .........+.+|...|.+++|+ +. ++++++.||.|++||+.........
T Consensus 238 i~d~~~--------~~---~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-------- 298 (357)
T 3i2n_A 238 VFDMRT--------QH---PTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKK-------- 298 (357)
T ss_dssp EEEEEE--------EE---TTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--C--------
T ss_pred EEeCcC--------CC---cccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccc--------
Confidence 999987 32 01111223456899999999999 44 7999999999999998654322111
Q ss_pred EEEEcCCcEEEEEcCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEE-EE-cCC
Q psy12614 347 VSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVA-YS-TES 424 (708)
Q Consensus 347 ~~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~-~~-~d~ 424 (708)
.+++... ..............|...|.+++|+|+|++|+ ++ .|+
T Consensus 299 ---~~~g~~~-------------------------------~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~ 344 (357)
T 3i2n_A 299 ---DSEGIEM-------------------------------GVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQ 344 (357)
T ss_dssp ---CTTSCCC-------------------------------CCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTS
T ss_pred ---cCCCCcc-------------------------------ccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCC
Confidence 0000000 00011234455567889999999999999998 54 599
Q ss_pred ceEEEEEEe
Q psy12614 425 CVRLHSLDL 433 (708)
Q Consensus 425 ~i~i~~~~~ 433 (708)
.|++|++..
T Consensus 345 ~i~iw~~~~ 353 (357)
T 3i2n_A 345 TVRVLIVTK 353 (357)
T ss_dssp EEEEEEECC
T ss_pred cEEEEECCC
Confidence 999999975
|
| >4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-34 Score=298.77 Aligned_cols=293 Identities=14% Similarity=0.133 Sum_probs=230.9
Q ss_pred eEeEEEeecCCceEEEEEec-CCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECC-CCCEEEEecCC-eE
Q psy12614 102 NIKSSTAVTSGTCWCLSVHK-KKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHS-SGDYLVTGCAA-AV 178 (708)
Q Consensus 102 ~~~~~~~~~~~~v~~~~~s~-~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~-d~~~l~~~~~d-~i 178 (708)
+......+|...|++++|+| ++++||+|+.||.|+|||+.+++......+.+|.+.|.+++|+| ++++|++++.| +|
T Consensus 110 ~~~~~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v 189 (435)
T 4e54_B 110 RILQKAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTT 189 (435)
T ss_dssp TSCCEEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCE
T ss_pred eecccCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEE
Confidence 34456678999999999999 56799999999999999998876554467789999999999998 68999999999 99
Q ss_pred EEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCC
Q psy12614 179 RVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDEN 257 (708)
Q Consensus 179 ~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~ 257 (708)
++||++++... .+...+ .....+.+++|+|++. +++|+.||.|++||++ ++.+..+.+|...|.+++|+|+++
T Consensus 190 ~iwd~~~~~~~-~~~~~~----~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~-~~~~~~~~~h~~~v~~v~~~p~~~ 263 (435)
T 4e54_B 190 RLQDFKGNILR-VFASSD----TINIWFCSLDVSASSRMVVTGDNVGNVILLNMD-GKELWNLRMHKKKVTHVALNPCCD 263 (435)
T ss_dssp EEEETTSCEEE-EEECCS----SCSCCCCCEEEETTTTEEEEECSSSBEEEEESS-SCBCCCSBCCSSCEEEEEECTTCS
T ss_pred EEeeccCCcee-EEeccC----CCCccEEEEEECCCCCEEEEEeCCCcEeeeccC-cceeEEEecccceEEeeeecCCCc
Confidence 99999765443 333222 3356688999999995 8899999999999986 566778889999999999999985
Q ss_pred -EEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEEEcCCCeEEEEeCCCCce
Q psy12614 258 -YLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSGGLDSYLSLSYYPPKTL 334 (708)
Q Consensus 258 -~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~~~~ 334 (708)
+|++++.|+.|++||+.. ++. .. ......+|...|.+++|+ +.+|++++.|+.|++||+.+...
T Consensus 264 ~~~~s~s~d~~v~iwd~~~--------~~~--~~---~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~ 330 (435)
T 4e54_B 264 WFLATASVDQTVKIWDLRQ--------VRG--KA---SFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDC 330 (435)
T ss_dssp SEEEEEETTSBCCEEETTT--------CCS--SS---CCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSS
T ss_pred eEEEEecCcceeeEEeccc--------ccc--cc---eEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCcc
Confidence 788999999999999987 320 00 122345789999999999 89999999999999999987652
Q ss_pred -eecCccC------CCCceEEEEcCCcEEEEE-------------cCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceE
Q psy12614 335 -VKYPCTL------AQSTPVSLAKDIQHVLLQ-------------YTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRL 394 (708)
Q Consensus 335 -~~~~~~~------~~~~~~~~s~~~~~l~~~-------------~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (708)
..+..+. .......++|++.+++++ .++.|++||..+++ .
T Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~--------------------~ 390 (435)
T 4e54_B 331 PLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGK--------------------M 390 (435)
T ss_dssp EEEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCC--------------------E
T ss_pred ceEEecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCc--------------------E
Confidence 2221111 112235666766666654 23569999998876 5
Q ss_pred EEEEEecCCCceEEE-EeCCCCcEEEEEcCCceEEEEEEe
Q psy12614 395 IVKMSAVNNATIRCS-VVSNDGKYVAYSTESCVRLHSLDL 433 (708)
Q Consensus 395 ~~~~~~~~~~~i~~~-~~s~~g~~l~~~~d~~i~i~~~~~ 433 (708)
+..+..+|...|.++ +|+|+|++|++|.|+.|+||+++.
T Consensus 391 ~~~l~~~~~~~v~s~~~fspdg~~lasg~d~~i~iW~~~~ 430 (435)
T 4e54_B 391 MCQLYDPESSGISSLNEFNPMGDTLASAMGYHILIWSQQE 430 (435)
T ss_dssp EEEECCSSCCCCCCEEEECTTSSCEEEECSSEEEECCCC-
T ss_pred EEEEeCCCCCcEEEEEEECCCCCEEEEEcCCcEEEEECCc
Confidence 555666788888887 699999999999999999999886
|
| >2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-35 Score=298.10 Aligned_cols=315 Identities=11% Similarity=0.072 Sum_probs=239.1
Q ss_pred CCCcEEEEEEe--CCEEEEEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEE
Q psy12614 70 LSNSIECLTWF--NDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLY 147 (708)
Q Consensus 70 ~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~ 147 (708)
+...|.+++|+ |+++|+++.|++|+ |.+.++.+ .+|...|++++|+|+| .++.+.+|+.+....
T Consensus 14 ~~~~v~sv~~SpDG~~iASas~D~TV~--d~~~~~~l---~gh~~~v~~V~FsPdg-------~~~~~~~~~~~~~~~-- 79 (588)
T 2j04_A 14 FEDWKNNLTWARDGTLYLTTFPDISIG--QPKYAKDI---NCNSKNLFHVKEFPLE-------FENKLDFELAQQNGL-- 79 (588)
T ss_dssp CSSSSCCEEECTTSCEEEECSSSEEEE--EECCCSCC---SSBGGGTEEEEEECCC-------CCCTTTTSCCCSSCS--
T ss_pred hhccEEEEEECCCCCEEEEEcCCceee--ccccccee---cCCCccEEEEEECCCC-------CcceEEEEeCCCceE--
Confidence 34889999999 99999999999999 75555444 7999999999999999 566666665443332
Q ss_pred EEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCc
Q psy12614 148 EKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGF 225 (708)
Q Consensus 148 ~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~ 225 (708)
..+ .|...|.+++|||||++||+++.| .|++||... .+..+. ++. . -....+.+++|+|||+ +++|+.||+
T Consensus 80 -~~~-~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~-~-~~~~sv~svafSPDG~~LAsgs~DGt 152 (588)
T 2j04_A 80 -LNS-QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKG-N-LSSRTYHCFEWNPIESSIVVGNEDGE 152 (588)
T ss_dssp -STT-SCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEECC-CSS-C-STTTCEEEEEECSSSSCEEEEETTSE
T ss_pred -eec-CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCC-c-cccccEEEEEEcCCCCEEEEEcCCCE
Confidence 222 458899999999999999999999 999999544 444433 210 0 0123699999999997 999999999
Q ss_pred EEEEeCCCCe-------eEEEe----eccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEE
Q psy12614 226 VRFWDGKTGV-------QWSDV----KTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVR 294 (708)
Q Consensus 226 i~~wd~~~~~-------~~~~~----~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~ 294 (708)
|++||+.++. .+.++ .+|...|.+++|+||| +++++.|+.+++|++.. +. .. ..
T Consensus 153 VkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~--------~~----~~-~~ 217 (588)
T 2j04_A 153 LQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSA--------SS----HQ-PV 217 (588)
T ss_dssp EEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCS--------SS----SC-CC
T ss_pred EEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCC--------Cc----cc-cc
Confidence 9999999875 35666 5677899999999999 88899999999999987 42 00 01
Q ss_pred eEEE-eccccceEEEEEeCCEEEEEcCCCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEEEcCCeEEEEEecCCC
Q psy12614 295 SVNR-VIHEGDVKSLALHGNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQ 373 (708)
Q Consensus 295 ~~~~-~~~~~~v~~l~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~ 373 (708)
...+ .+|...|.+++|+++.|++++ ++.|++|++.+..
T Consensus 218 ~~tL~~~h~~~V~svaFsg~~LASa~-~~tIkLWd~~~~~---------------------------------------- 256 (588)
T 2j04_A 218 SRMIQNASRRKITDLKIVDYKVVLTC-PGYVHKIDLKNYS---------------------------------------- 256 (588)
T ss_dssp EEEEECCCSSCCCCEEEETTEEEEEC-SSEEEEEETTTTE----------------------------------------
T ss_pred eeeecccccCcEEEEEEECCEEEEEe-CCeEEEEECCCCe----------------------------------------
Confidence 1234 378889999999988888887 6899888876543
Q ss_pred CCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEe--CCCCcEEEEEc-CCceEEEEEEecCCcceeEEeecCCccc
Q psy12614 374 STDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVV--SNDGKYVAYST-ESCVRLHSLDLDGDKPQISRIKNLPAPL 450 (708)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--s~~g~~l~~~~-d~~i~i~~~~~~~~~~~~~~~~~~~~~~ 450 (708)
......+|...+..++| +||++.++++. +|+ ++|..+.
T Consensus 257 ---------------------~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~-klw~~d~----------------- 297 (588)
T 2j04_A 257 ---------------------ISSLKTGSLENFHIIPLNHEKESTILLMSNKTSY-KVLLEDE----------------- 297 (588)
T ss_dssp ---------------------EEEEECSCCSCCCEEEETTCSSCEEEEECSSCEE-EEEESSS-----------------
T ss_pred ---------------------EEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEeecc-----------------
Confidence 22233367888899999 99998888866 888 9987641
Q ss_pred ccceeEEEEEecCCCeEEEEecCCc--EEEecCCCeEEEEEecCCCCCccCcceEEEEECCCCcEEEEEe
Q psy12614 451 FKSIFTHVLISADSTLLLAVSLNGP--LYIIDLSSLEIKYCVDPYKSNLMSDVISLVQMSECKQYIVCAD 518 (708)
Q Consensus 451 ~~~~i~~~~~s~d~~~l~~~~~dg~--i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~ 518 (708)
++|+||+..+++. |+. +|+...+. +..+ .+ ...|.+++|||||+.+|+++
T Consensus 298 -------~~~spd~~l~a~~--d~~v~lW~~~g~~---l~~~---~~---~~~I~~va~SPdG~~lA~~~ 349 (588)
T 2j04_A 298 -------LHVTADNIIAPYL--EKKFKKWSTIWNE---FNNY---ET---TLVIHGISLSPDGYSIAIVY 349 (588)
T ss_dssp -------EEEECCCSSHHHH--HHHHHHTTTTTTS---SSSS---CC---EEEEEEEEECTTSSEEEEEE
T ss_pred -------EEECCCceEEEEc--CCEEEEEECCCCc---eeee---cc---ceEEEEEEECCCCCEEEEEE
Confidence 5688999888764 555 77654441 1122 11 45688999999999999885
|
| >3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-33 Score=284.30 Aligned_cols=301 Identities=12% Similarity=0.096 Sum_probs=238.6
Q ss_pred EEEecCCCCCcEEEEEEe------CCEEEEEcCCCcEEEEECCCCeEeEEEee-----cCCceEEEEEecC----CCEEE
Q psy12614 63 RVFIGDPLSNSIECLTWF------NDRLFSGGLQGFVNEYDMRRLNIKSSTAV-----TSGTCWCLSVHKK----KRLLA 127 (708)
Q Consensus 63 ~~~~~h~~~~~v~~l~~~------~~~l~s~~~d~~i~vwd~~~~~~~~~~~~-----~~~~v~~~~~s~~----~~~la 127 (708)
....+|. .+|.+++|+ ...+++++.++.|++||+.+++.+..+.. |...|.+++|+|+ +++|+
T Consensus 12 ~~~~~h~--~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~ 89 (366)
T 3k26_A 12 SLKEDHN--QPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLA 89 (366)
T ss_dssp EEECTTC--SCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEE
T ss_pred EeecCCC--CceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEE
Confidence 4667899 999999999 34677777788999999998887777764 4578999999999 67999
Q ss_pred EEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECC-CCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCcee
Q psy12614 128 AGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHS-SGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTA 205 (708)
Q Consensus 128 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~-d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 205 (708)
+|+.||.|++||+.+++.. ..+.+|...|.+++|+| ++++|++++.| .|++||+.+++.+..+.... .+...
T Consensus 90 ~~~~dg~i~v~d~~~~~~~--~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~----~~~~~ 163 (366)
T 3k26_A 90 VAGSRGIIRIINPITMQCI--KHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVE----GHRDE 163 (366)
T ss_dssp EEETTCEEEEECTTTCCEE--EEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTT----SCSSC
T ss_pred EecCCCEEEEEEchhceEe--eeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccc----cccCc
Confidence 9999999999999999887 67888999999999999 99999999999 99999999998887774211 34889
Q ss_pred EEEEEEccCCE-EEEEcCCCcEEEEeCCCCeeEEEee----------------------------ccccCeEEEEEeCCC
Q psy12614 206 VWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDVK----------------------------THKKDILALTVSEDE 256 (708)
Q Consensus 206 v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~~----------------------------~~~~~i~~~~~s~~~ 256 (708)
|.+++|+|++. +++++.||.|++||+++++....+. .|...|.+++|+ +
T Consensus 164 v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~ 241 (366)
T 3k26_A 164 VLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--G 241 (366)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--T
T ss_pred eeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--C
Confidence 99999999995 9999999999999999876544433 389999999999 6
Q ss_pred CEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe----CCEEEEEcCCCeEEEEeCCCC
Q psy12614 257 NYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH----GNRLYSGGLDSYLSLSYYPPK 332 (708)
Q Consensus 257 ~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~----~~~l~s~~~d~~i~iw~~~~~ 332 (708)
++|++++.|+.|++||+.+.......... ..........+..|...|.+++|+ +.+|++++.||.|++||+.+.
T Consensus 242 ~~l~~~~~d~~i~~wd~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~ 319 (366)
T 3k26_A 242 DLILSKSCENAIVCWKPGKMEDDIDKIKP--SESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVE 319 (366)
T ss_dssp TEEEEECSSSEEEEEEESSTTCCGGGCCT--TCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSS
T ss_pred CEEEEEecCCEEEEEeCCCcccccccccc--CCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCC
Confidence 79999999999999999872111100000 112233466677788888888877 578888888888888887654
Q ss_pred ceeecCccCCCCceEEEEcCCcEEEEEcCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecC--CCceEEEE
Q psy12614 333 TLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVN--NATIRCSV 410 (708)
Q Consensus 333 ~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~~~~ 410 (708)
.... ........+ ...|.+++
T Consensus 320 ~~~~---------------------------------------------------------~~~~~~~~~~~~~~v~~~~ 342 (366)
T 3k26_A 320 DPHK---------------------------------------------------------AKCTTLTHHKCGAAIRQTS 342 (366)
T ss_dssp SGGG---------------------------------------------------------CEEEEECCTTCCSCEEEEE
T ss_pred CCcc---------------------------------------------------------ccceEEcccccCCceEEEE
Confidence 3111 111222234 68899999
Q ss_pred eCCCCcEEEEE-cCCceEEEEEE
Q psy12614 411 VSNDGKYVAYS-TESCVRLHSLD 432 (708)
Q Consensus 411 ~s~~g~~l~~~-~d~~i~i~~~~ 432 (708)
|+|++++|+++ .||.|++||+.
T Consensus 343 ~s~~~~~l~s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 343 FSRDSSILIAVCDDASIWRWDRL 365 (366)
T ss_dssp ECTTSSEEEEEETTSEEEEEEC-
T ss_pred eCCCCCeEEEEeCCCEEEEEEec
Confidence 99999999985 59999999975
|
| >2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-33 Score=276.24 Aligned_cols=245 Identities=12% Similarity=0.185 Sum_probs=208.1
Q ss_pred EEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECCC--CeEeEEEeecCCceEEEEEecC--CCEEEEEeCCCcEEE
Q psy12614 64 VFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMRR--LNIKSSTAVTSGTCWCLSVHKK--KRLLAAGTEQGHINL 137 (708)
Q Consensus 64 ~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~--~~~~~~~~~~~~~v~~~~~s~~--~~~la~~~~d~~i~i 137 (708)
.+.+|. ..|.+++|+ +++|++++.|++|++||+++ .+++..+.+|.+.|++++|+|+ +++||+|+.|++|++
T Consensus 4 ~~~~h~--~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~i 81 (297)
T 2pm7_B 4 IANAHN--EMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMI 81 (297)
T ss_dssp ECCSCS--SCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEE
T ss_pred eccCCc--CceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEE
Confidence 678999 999999999 99999999999999999975 4678899999999999999864 899999999999999
Q ss_pred EEccCCcEEEEEecccccccEEEEEECCC--CCEEEEecCC-eEEEEEcCCCceE--EEEEecccCCCCCceeEEEEEEc
Q psy12614 138 FQISDEGLLYEKLLDRQQGRILCTAWHSS--GDYLVTGCAA-AVRVWDIHKGHAI--HKMSLDKSSKFSKNTAVWCVAFC 212 (708)
Q Consensus 138 wd~~~~~~~~~~~~~~~~~~v~~~~~s~d--~~~l~~~~~d-~i~iwd~~~~~~~--~~~~~~~~~~~~~~~~v~~~~~~ 212 (708)
||+.+++......+.+|...|.+++|+|+ +.+|++++.| .|++||+.++... ..+. .|...|.+++|+
T Consensus 82 Wd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~-------~h~~~v~~~~~~ 154 (297)
T 2pm7_B 82 WKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIID-------AHAIGVNSASWA 154 (297)
T ss_dssp EEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEE-------CCSSCEEEEEEC
T ss_pred EEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeee-------cccCccceEeec
Confidence 99998753222567789999999999998 8999999999 9999999876422 2222 347889999999
Q ss_pred cC-------------C-EEEEEcCCCcEEEEeCCCCe----eEEEeeccccCeEEEEEeCCC---CEEEEEecCCeEEEE
Q psy12614 213 AD-------------F-TIITGDSGGFVRFWDGKTGV----QWSDVKTHKKDILALTVSEDE---NYLYCAGVDPTVVCF 271 (708)
Q Consensus 213 ~~-------------~-~l~~~~~dg~i~~wd~~~~~----~~~~~~~~~~~i~~~~~s~~~---~~l~~~~~dg~i~iw 271 (708)
|+ + .+++|+.|+.|++||+++++ ....+.+|...|.+++|+|++ ++|++++.|+.|++|
T Consensus 155 p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iW 234 (297)
T 2pm7_B 155 PATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIW 234 (297)
T ss_dssp CCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEE
T ss_pred CCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEE
Confidence 97 3 59999999999999998765 567788999999999999984 899999999999999
Q ss_pred EccCCcccccCCCCCCCCcceEEeEEE--eccccceEEEEEe--CCEEEEEcCCCeEEEEeCC
Q psy12614 272 QRTRKPQVCSTSGPEQGSSVWVRSVNR--VIHEGDVKSLALH--GNRLYSGGLDSYLSLSYYP 330 (708)
Q Consensus 272 ~~~~~~~~~~~~g~~~~~~~~~~~~~~--~~~~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~ 330 (708)
|+.. +. ..+. ...+ ..|...|.+++|+ +++|++++.|+.|++|+..
T Consensus 235 d~~~--------~~----~~~~-~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~ 284 (297)
T 2pm7_B 235 TQDN--------EQ----GPWK-KTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 284 (297)
T ss_dssp EESS--------TT----SCCE-EEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEEC
T ss_pred EeCC--------CC----Cccc-eeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEEC
Confidence 9986 32 1111 1122 4678889999999 8999999999999999975
|
| >3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-33 Score=295.24 Aligned_cols=321 Identities=10% Similarity=0.130 Sum_probs=237.9
Q ss_pred CCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCe----------EEEEEecCCCC----------CcEEEEEEe--C
Q psy12614 24 PEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPH----------VDRVFIGDPLS----------NSIECLTWF--N 81 (708)
Q Consensus 24 ~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~----------~~~~~~~h~~~----------~~v~~l~~~--~ 81 (708)
.|.+.|++++|+|+|++||+|+.||.|+|||+.++.. +...+.+|... ..|.+++|+ +
T Consensus 26 ~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~ 105 (447)
T 3dw8_B 26 AEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQK 105 (447)
T ss_dssp CGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCC
T ss_pred cccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCC
Confidence 3679999999999999999999999999999998762 23478888511 569999999 4
Q ss_pred --CEEEEEcCCCcEEEEECCCCeEe---------------------------------------EE-EeecCCceEEEEE
Q psy12614 82 --DRLFSGGLQGFVNEYDMRRLNIK---------------------------------------SS-TAVTSGTCWCLSV 119 (708)
Q Consensus 82 --~~l~s~~~d~~i~vwd~~~~~~~---------------------------------------~~-~~~~~~~v~~~~~ 119 (708)
..|++++.|++|++||+.++... .. ..+|...|.+++|
T Consensus 106 ~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 185 (447)
T 3dw8_B 106 NAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISI 185 (447)
T ss_dssp SSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEE
T ss_pred CcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEE
Confidence 68999999999999998875432 12 3579999999999
Q ss_pred ecCCCEEEEEeCCCcEEEEEccCCcEEEEE------ecccccccEEEEEECCCC-CEEEEecCC-eEEEEEcCCCce---
Q psy12614 120 HKKKRLLAAGTEQGHINLFQISDEGLLYEK------LLDRQQGRILCTAWHSSG-DYLVTGCAA-AVRVWDIHKGHA--- 188 (708)
Q Consensus 120 s~~~~~la~~~~d~~i~iwd~~~~~~~~~~------~~~~~~~~v~~~~~s~d~-~~l~~~~~d-~i~iwd~~~~~~--- 188 (708)
+|++++|++| .|+.|++||+......... .+.+|...|.+++|+|++ ++|++++.| .|++||+++++.
T Consensus 186 ~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 264 (447)
T 3dw8_B 186 NSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDR 264 (447)
T ss_dssp CTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCT
T ss_pred cCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccc
Confidence 9999999998 8999999999844332211 367899999999999998 999999999 999999999886
Q ss_pred -EEEEEecccCC-----CCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCC-CeeEEEeeccccC--------------
Q psy12614 189 -IHKMSLDKSSK-----FSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKT-GVQWSDVKTHKKD-------------- 246 (708)
Q Consensus 189 -~~~~~~~~~~~-----~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~-~~~~~~~~~~~~~-------------- 246 (708)
...+....... ..+...|.+++|+|+|+ +++++. +.|++||+++ ++.+..+.+|...
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~ 343 (447)
T 3dw8_B 265 HSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIF 343 (447)
T ss_dssp TCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGG
T ss_pred eeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeeccccccccccccccccccc
Confidence 55555331000 00012899999999996 777777 9999999997 8888888877542
Q ss_pred -eEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe-CCEEEEEcCCCeE
Q psy12614 247 -ILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH-GNRLYSGGLDSYL 324 (708)
Q Consensus 247 -i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~-~~~l~s~~~d~~i 324 (708)
+..++|+|++++|++++.||.|++||+.+ ++ ...+..|.......... ...+..++....
T Consensus 344 ~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~--------~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 405 (447)
T 3dw8_B 344 DKFECCWNGSDSVVMTGSYNNFFRMFDRNT--------KR---------DITLEASRENNKPRTVLKPRKVCASGKRKK- 405 (447)
T ss_dssp CCCCEEECTTSSEEEEECSTTEEEEEETTT--------CC---------EEEEECCSTTCCTTCBCCCCCEECSSCCCT-
T ss_pred cceEEEECCCCCEEEEeccCCEEEEEEcCC--------Cc---------ceeeeecccccccccccCCccccccCCccc-
Confidence 33499999999999999999999999998 64 23445554433322222 222222221100
Q ss_pred EEEeCCCCceeecCccCCCCceEEEEcCCcEEEEEcCCeEEEEEec
Q psy12614 325 SLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSLG 370 (708)
Q Consensus 325 ~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~ 370 (708)
................++++|++.+|+++..+.+.+|...
T Consensus 406 ------~~~~~~~~~~~~~i~~~~~~p~~~~la~~~~~~~~~~~~~ 445 (447)
T 3dw8_B 406 ------DEISVDSLDFNKKILHTAWHPKENIIAVATTNNLYIFQDK 445 (447)
T ss_dssp ------TCEEGGGCCTTSCCCEEEECSSSSEEEEECSSCEEEEECC
T ss_pred ------ccccccccccCCceeEEEECCCCCEEEEEecceeeeeccc
Confidence 0000001112345677999999999999988889998754
|
| >3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-33 Score=281.43 Aligned_cols=285 Identities=11% Similarity=0.171 Sum_probs=237.5
Q ss_pred eeeeeeccCCCCcEEEEEEcCC---CCEEEEEeCCCcEEEEeCCC-CCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcC
Q psy12614 16 VHNIKFYAPEPKVINCIACEPK---SSRLAVSRADQSIEIWDISE-TPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGL 89 (708)
Q Consensus 16 ~~~~~~~~~h~~~v~~~~~s~~---~~~la~~~~dg~v~iwd~~~-~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~ 89 (708)
...++.+.+|.+.|++++|+|+ |++||+|+.||.|+|||+.+ +..+...+.+|. ..|.+++|+ +++|++++.
T Consensus 29 ~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~--~~v~~~~~~~~~~~l~s~~~ 106 (368)
T 3mmy_A 29 MKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHT--GPVLDVCWSDDGSKVFTASC 106 (368)
T ss_dssp TCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECS--SCEEEEEECTTSSEEEEEET
T ss_pred cceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEecccc--CCEEEEEECcCCCEEEEEcC
Confidence 3456678999999999999999 69999999999999999998 666656899999 999999999 889999999
Q ss_pred CCcEEEEECCCCeEeEEEeecCCceEEEEE--ecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCC
Q psy12614 90 QGFVNEYDMRRLNIKSSTAVTSGTCWCLSV--HKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSG 167 (708)
Q Consensus 90 d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~--s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~ 167 (708)
||.|++||+.+++.+. +..|...|.+++| +|++++|++++.|+.|++||+.+++.. ..+..+ ..+.++.+.+
T Consensus 107 dg~v~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~--~~~~~~-~~~~~~~~~~-- 180 (368)
T 3mmy_A 107 DKTAKMWDLSSNQAIQ-IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPM--MVLQLP-ERCYCADVIY-- 180 (368)
T ss_dssp TSEEEEEETTTTEEEE-EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCS--EEEECS-SCEEEEEEET--
T ss_pred CCcEEEEEcCCCCcee-eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEE--EEEecC-CCceEEEecC--
Confidence 9999999999998776 5679999999999 899999999999999999999988876 444444 3567777664
Q ss_pred CEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCC-----EEEEEcCCCcEEEEeCCCC---eeEE
Q psy12614 168 DYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADF-----TIITGDSGGFVRFWDGKTG---VQWS 238 (708)
Q Consensus 168 ~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-----~l~~~~~dg~i~~wd~~~~---~~~~ 238 (708)
..+++++.+ .+.+|++............ .....+.++++.++. .+++++.||.|++||++.. ..+.
T Consensus 181 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~ 255 (368)
T 3mmy_A 181 PMAVVATAERGLIVYQLENQPSEFRRIES-----PLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNF 255 (368)
T ss_dssp TEEEEEEGGGCEEEEECSSSCEEEEECCC-----SCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSE
T ss_pred CeeEEEeCCCcEEEEEeccccchhhhccc-----cccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccce
Confidence 477788888 9999999877655444332 113444555554433 1999999999999999887 5566
Q ss_pred Eeecccc------------CeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceE
Q psy12614 239 DVKTHKK------------DILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVK 306 (708)
Q Consensus 239 ~~~~~~~------------~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~ 306 (708)
.+.+|.. .|.+++|+|++++|++++.||.|++||+.+ ++ ....+..|...|.
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~--------~~--------~~~~~~~~~~~v~ 319 (368)
T 3mmy_A 256 TFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDA--------RT--------KLKTSEQLDQPIS 319 (368)
T ss_dssp EEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTT--------TE--------EEEECCCCSSCEE
T ss_pred eeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCC--------Cc--------EEEEecCCCCCce
Confidence 7777766 799999999999999999999999999998 65 6777889999999
Q ss_pred EEEEe--CCEEEEEcCCCeEEEEeC
Q psy12614 307 SLALH--GNRLYSGGLDSYLSLSYY 329 (708)
Q Consensus 307 ~l~~~--~~~l~s~~~d~~i~iw~~ 329 (708)
+++|+ +.+|++++.|+..+.|++
T Consensus 320 ~~~~s~~g~~l~~~s~d~~~~~~~~ 344 (368)
T 3mmy_A 320 ACCFNHNGNIFAYASSYDWSKGHEF 344 (368)
T ss_dssp EEEECTTSSCEEEEECCCSTTCGGG
T ss_pred EEEECCCCCeEEEEecccccccccc
Confidence 99999 899999999886555543
|
| >4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-32 Score=280.69 Aligned_cols=239 Identities=17% Similarity=0.285 Sum_probs=216.2
Q ss_pred CCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEeCCEEEEEcCCCcEEEEECC-CCe
Q psy12614 24 PEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWFNDRLFSGGLQGFVNEYDMR-RLN 102 (708)
Q Consensus 24 ~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~~~~l~s~~~d~~i~vwd~~-~~~ 102 (708)
.|.+.|++++|+|++++||+|+.||.|+|||+.+++.+. .+.+|. ..|.+++|+++.|++++.||.|++||+. .+.
T Consensus 132 ~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~-~~~~~~--~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~ 208 (401)
T 4aez_A 132 DESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLR-TMAGHQ--ARVGCLSWNRHVLSSGSRSGAIHHHDVRIANH 208 (401)
T ss_dssp CTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEE-EECCCS--SCEEEEEEETTEEEEEETTSEEEEEETTSSSC
T ss_pred CCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEE-EecCCC--CceEEEEECCCEEEEEcCCCCEEEEecccCcc
Confidence 489999999999999999999999999999999998876 888999 9999999999999999999999999999 567
Q ss_pred EeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCC-EEEEec--CC-eE
Q psy12614 103 IKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGD-YLVTGC--AA-AV 178 (708)
Q Consensus 103 ~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~-~l~~~~--~d-~i 178 (708)
....+.+|.+.|.+++|+|++++|++++.|+.|++||+.+++.. ..+..|...|.+++|+|++. .+++++ .| .|
T Consensus 209 ~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~--~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i 286 (401)
T 4aez_A 209 QIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPK--FTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQI 286 (401)
T ss_dssp EEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEE--EEECCCSSCCCEEEECTTSTTEEEEECCTTTCEE
T ss_pred eeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCcc--EEecCCcceEEEEEECCCCCCEEEEecCCCCCEE
Confidence 78889999999999999999999999999999999999998887 67788999999999999775 555554 57 99
Q ss_pred EEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEE--EcCCCcEEEEeCCCCeeEE--EeeccccCeEEEEEe
Q psy12614 179 RVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IIT--GDSGGFVRFWDGKTGVQWS--DVKTHKKDILALTVS 253 (708)
Q Consensus 179 ~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~--~~~dg~i~~wd~~~~~~~~--~~~~~~~~i~~~~~s 253 (708)
++||+.+++.+..+.. ...+.+++|+|++. +++ |+.||.|++||+.+++... .+.+|...|.+++|+
T Consensus 287 ~i~d~~~~~~~~~~~~--------~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s 358 (401)
T 4aez_A 287 HFWNAATGARVNTVDA--------GSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALS 358 (401)
T ss_dssp EEEETTTCCEEEEEEC--------SSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEEC
T ss_pred EEEECCCCCEEEEEeC--------CCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEEC
Confidence 9999999999888753 56799999999996 666 5589999999999875544 467899999999999
Q ss_pred CCCCEEEEEecCCeEEEEEccC
Q psy12614 254 EDENYLYCAGVDPTVVCFQRTR 275 (708)
Q Consensus 254 ~~~~~l~~~~~dg~i~iw~~~~ 275 (708)
|++++|++++.||.|++|++.+
T Consensus 359 ~dg~~l~s~~~dg~i~iw~~~~ 380 (401)
T 4aez_A 359 PDGRILSTAASDENLKFWRVYD 380 (401)
T ss_dssp TTSSEEEEECTTSEEEEEECCC
T ss_pred CCCCEEEEEeCCCcEEEEECCC
Confidence 9999999999999999999988
|
| >3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-33 Score=278.00 Aligned_cols=252 Identities=12% Similarity=0.167 Sum_probs=204.0
Q ss_pred EEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECCCCe--EeEEEeecCCceEEEEEec--CCCEEEEEeCCCc
Q psy12614 61 VDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMRRLN--IKSSTAVTSGTCWCLSVHK--KKRLLAAGTEQGH 134 (708)
Q Consensus 61 ~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~~--~~~~~~~~~~~v~~~~~s~--~~~~la~~~~d~~ 134 (708)
+...+.+|. +.|.+++|+ +++|++++.|++|++||+.+++ ++..+.+|.+.|++++|+| ++++||+|+.|++
T Consensus 5 ~~~~~~~H~--~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~ 82 (316)
T 3bg1_A 5 INTVDTSHE--DMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRK 82 (316)
T ss_dssp -----------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSC
T ss_pred eeeeccccc--CeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCE
Confidence 344778999 999999999 9999999999999999998875 5678899999999999986 4899999999999
Q ss_pred EEEEEccCCcEEEEEecccccccEEEEEECCC--CCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEE
Q psy12614 135 INLFQISDEGLLYEKLLDRQQGRILCTAWHSS--GDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAF 211 (708)
Q Consensus 135 i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d--~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 211 (708)
|++||+++++......+.+|...|.+++|+|+ +.+|++++.| .|++||+..+......... . .|...+.+++|
T Consensus 83 v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~-~---~h~~~v~~~~~ 158 (316)
T 3bg1_A 83 VIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKIN-N---AHTIGCNAVSW 158 (316)
T ss_dssp EEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBT-T---SSSSCBCCCEE
T ss_pred EEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeee-c---cccCCcceEEE
Confidence 99999998754333677889999999999998 7899999999 9999999876433221111 1 44778999999
Q ss_pred ccC-----------------C-EEEEEcCCCcEEEEeCCCC---eeEEEeeccccCeEEEEEeCCC----CEEEEEecCC
Q psy12614 212 CAD-----------------F-TIITGDSGGFVRFWDGKTG---VQWSDVKTHKKDILALTVSEDE----NYLYCAGVDP 266 (708)
Q Consensus 212 ~~~-----------------~-~l~~~~~dg~i~~wd~~~~---~~~~~~~~~~~~i~~~~~s~~~----~~l~~~~~dg 266 (708)
+|+ + .+++++.|+.|++||++.+ +.+..+.+|...|.+++|+|++ ++|++++.|+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~ 238 (316)
T 3bg1_A 159 APAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDG 238 (316)
T ss_dssp CCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTC
T ss_pred ccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCC
Confidence 997 2 4899999999999999755 4677889999999999999986 8999999999
Q ss_pred eEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEEEcCCCeEEEEeCC
Q psy12614 267 TVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSGGLDSYLSLSYYP 330 (708)
Q Consensus 267 ~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~ 330 (708)
.|++|++.+ ... ..+ ....+..|...|.+++|+ +.+|++++.|+.|++|+..
T Consensus 239 ~v~iw~~~~--------~~~---~~~-~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 239 RVFIWTCDD--------ASS---NTW-SPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKES 292 (316)
T ss_dssp EEEEEECSS--------TTC---CCC-BCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEEC
T ss_pred eEEEEEccC--------ccc---cch-hhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEEC
Confidence 999999876 210 000 112345788999999999 8899999999999999975
|
| >4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-32 Score=279.98 Aligned_cols=243 Identities=19% Similarity=0.338 Sum_probs=216.0
Q ss_pred ccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEeCCEEEEEcCCCcEEEEECCCC
Q psy12614 22 YAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWFNDRLFSGGLQGFVNEYDMRRL 101 (708)
Q Consensus 22 ~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~~~~l~s~~~d~~i~vwd~~~~ 101 (708)
+.+|...|++++|+|+|++||+|+.||.|+|||+.+++.+. .+.+|. ..|.++++++..|++++.|+.+++||....
T Consensus 143 ~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~-~~~~h~--~~v~~~s~~~~~l~sgs~d~~i~~~d~~~~ 219 (420)
T 4gga_A 143 MEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLR-NMTSHS--ARVGSLSWNSYILSSGSRSGHIHHHDVRVA 219 (420)
T ss_dssp CCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEE-EECCCS--SCEEEEEEETTEEEEEETTSEEEEEETTSS
T ss_pred ecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEE-EEeCCC--CceEEEeeCCCEEEEEeCCCceeEeeeccc
Confidence 45788999999999999999999999999999999998886 899999 999999999999999999999999998874
Q ss_pred -eEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEE--EEEecccccccEEEEEECCCCC-EEEE--ecC
Q psy12614 102 -NIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLL--YEKLLDRQQGRILCTAWHSSGD-YLVT--GCA 175 (708)
Q Consensus 102 -~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~--~~~~~~~~~~~v~~~~~s~d~~-~l~~--~~~ 175 (708)
..+..+.+|...+..+.++|+++++++++.|+.+++|+..+++.. .......|...|.+++|+|++. .+++ |+.
T Consensus 220 ~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~ 299 (420)
T 4gga_A 220 EHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTS 299 (420)
T ss_dssp SCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTT
T ss_pred ceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecC
Confidence 466788999999999999999999999999999999999876531 1145667889999999999765 4444 456
Q ss_pred C-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEE--cCCCcEEEEeCCCCeeEEEeeccccCeEEEE
Q psy12614 176 A-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITG--DSGGFVRFWDGKTGVQWSDVKTHKKDILALT 251 (708)
Q Consensus 176 d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~--~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~ 251 (708)
| .|++||+.+++....+.. ...+.++.|+|++. ++++ ..||.|++||+.+++++..+.+|.+.|.+++
T Consensus 300 D~~I~iwd~~t~~~~~~~~~--------~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~ 371 (420)
T 4gga_A 300 DRHIRIWNVCSGACLSAVDA--------HSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLT 371 (420)
T ss_dssp TCEEEEEETTTTEEEEEEEC--------SSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEE
T ss_pred CCEEEEEeCCccccceeecc--------ccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCCEEEEE
Confidence 7 999999999999888764 46688999999884 5544 4799999999999999999999999999999
Q ss_pred EeCCCCEEEEEecCCeEEEEEccC
Q psy12614 252 VSEDENYLYCAGVDPTVVCFQRTR 275 (708)
Q Consensus 252 ~s~~~~~l~~~~~dg~i~iw~~~~ 275 (708)
|+|||++|++|+.|++|++||+..
T Consensus 372 ~spdg~~l~S~s~D~tvriWdv~~ 395 (420)
T 4gga_A 372 MSPDGATVASAAADETLRLWRCFE 395 (420)
T ss_dssp ECTTSSCEEEEETTTEEEEECCSC
T ss_pred EcCCCCEEEEEecCCeEEEEECCC
Confidence 999999999999999999999976
|
| >1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-32 Score=282.93 Aligned_cols=284 Identities=17% Similarity=0.263 Sum_probs=237.8
Q ss_pred ecCCCCCcEEEEEEeCCEEEEEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcE
Q psy12614 66 IGDPLSNSIECLTWFNDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGL 145 (708)
Q Consensus 66 ~~h~~~~~v~~l~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~ 145 (708)
.+|. ..|.+++|.+++|++|+.||.|++||+.+++....+.+|.+.|.+++| ++++|++|+.||.|++||+.+++.
T Consensus 130 ~~~~--~~v~~~~~d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~ 205 (435)
T 1p22_A 130 SETS--KGVYCLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEM 205 (435)
T ss_dssp CSSC--CCEEEEECCSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCE
T ss_pred cCCC--CcEEEEEECCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcE
Confidence 3455 789999999999999999999999999999999999999999999999 788999999999999999999988
Q ss_pred EEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEEEEcCCC
Q psy12614 146 LYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGG 224 (708)
Q Consensus 146 ~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg 224 (708)
. ..+.+|...|.+++|++ .++++++.| .|++||+.++.......... ++...|.+++| ....+++++.||
T Consensus 206 ~--~~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~----~~~~~v~~~~~-~~~~l~s~~~dg 276 (435)
T 1p22_A 206 L--NTLIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDITLRRVLV----GHRAAVNVVDF-DDKYIVSASGDR 276 (435)
T ss_dssp E--EEECCCCSCEEEEECCT--TEEEEEETTSCEEEEECSSSSCCEEEEEEC----CCSSCEEEEEE-ETTEEEEEETTS
T ss_pred E--EEEcCCCCcEEEEEEcC--CEEEEeeCCCcEEEEeCCCCCCceeeeEec----CCCCcEEEEEe-CCCEEEEEeCCC
Confidence 7 77889999999999974 589999999 99999999887654322211 44888999999 233699999999
Q ss_pred cEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccc
Q psy12614 225 FVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGD 304 (708)
Q Consensus 225 ~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 304 (708)
.|++||+++++.+..+.+|...|.+++++ ++++++|+.||.|++||+.+ ++ ....+.+|...
T Consensus 277 ~i~vwd~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~g~~dg~i~iwd~~~--------~~--------~~~~~~~h~~~ 338 (435)
T 1p22_A 277 TIKVWNTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIEC--------GA--------CLRVLEGHEEL 338 (435)
T ss_dssp EEEEEETTTCCEEEEEECCSSCEEEEEEE--TTEEEEEETTSCEEEEETTT--------CC--------EEEEECCCSSC
T ss_pred eEEEEECCcCcEEEEEcCCCCcEEEEEeC--CCEEEEEeCCCeEEEEECCC--------CC--------EEEEEeCCcCc
Confidence 99999999999999999999999999994 67999999999999999998 76 67788899999
Q ss_pred eEEEEEeCCEEEEEcCCCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEEEcCCeEEEEEecCCCCCCCCCCCCCC
Q psy12614 305 VKSLALHGNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTT 384 (708)
Q Consensus 305 v~~l~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~~~ 384 (708)
|.++++.+.+|++++.||.|++||+.+.......
T Consensus 339 v~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~---------------------------------------------- 372 (435)
T 1p22_A 339 VRCIRFDNKRIVSGAYDGKIKVWDLVAALDPRAP---------------------------------------------- 372 (435)
T ss_dssp EEEEECCSSEEEEEETTSCEEEEEHHHHTSTTSC----------------------------------------------
T ss_pred EEEEEecCCEEEEEeCCCcEEEEECCCCCCcccc----------------------------------------------
Confidence 9999999999999999999999998543210000
Q ss_pred cccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEEEc-CCceEEEEEEec
Q psy12614 385 GVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYST-ESCVRLHSLDLD 434 (708)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~-d~~i~i~~~~~~ 434 (708)
...........|...|.+++| ++.+|+++. ||.|++|++...
T Consensus 373 ------~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~Dg~i~iwd~~~~ 415 (435)
T 1p22_A 373 ------AGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWDFLND 415 (435)
T ss_dssp ------TTTTEEEEECCCSSCCCCEEE--CSSCEEECCSSSEEEEEC----
T ss_pred ------ccchheeeccCCCCCeEEEEe--CCCEEEEEeCCCEEEEEECCCC
Confidence 000133344578888999999 677888855 999999999863
|
| >4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-33 Score=284.90 Aligned_cols=316 Identities=16% Similarity=0.207 Sum_probs=247.1
Q ss_pred CCcEEEEECCCCeEeEEEeecCCceEEEEEec-CCCEEEEEeCCCcEEEEEccCCcEEEEEe-----------ccccccc
Q psy12614 90 QGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHK-KKRLLAAGTEQGHINLFQISDEGLLYEKL-----------LDRQQGR 157 (708)
Q Consensus 90 d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~-~~~~la~~~~d~~i~iwd~~~~~~~~~~~-----------~~~~~~~ 157 (708)
++.+++|+++.++....+.+|.+.|++++|+| ++++||+++.||.|++||+.+++...... ..+|...
T Consensus 22 ~~~~~v~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (408)
T 4a11_B 22 ESTRRVLGLELNKDRDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYS 101 (408)
T ss_dssp HHHHHHHTEEECTTEEECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSC
T ss_pred cCcceeeccccCcceeeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCc
Confidence 45678888888888888999999999999999 99999999999999999999876431111 1258999
Q ss_pred EEEEEECC-CCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCC----EEEEEcCCCcEEEEeC
Q psy12614 158 ILCTAWHS-SGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADF----TIITGDSGGFVRFWDG 231 (708)
Q Consensus 158 v~~~~~s~-d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~----~l~~~~~dg~i~~wd~ 231 (708)
|.+++|+| ++.+|++++.| .|++||+.+++....+.. ...+.++.+++.+ .+++++.+|.|++||+
T Consensus 102 v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~ 173 (408)
T 4a11_B 102 VETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFNF--------EETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDL 173 (408)
T ss_dssp EEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEEC--------SSCEEEEEECSSCSSCCEEEEEESSSSEEEEES
T ss_pred EEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceeccC--------CCceeeeEeecCCCCCcEEEEEcCCCeEEEEeC
Confidence 99999999 77899999999 999999999998887753 5678899998854 4889999999999999
Q ss_pred CCCeeEEEeeccccCeEEEEEeCCCC-EEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEE
Q psy12614 232 KTGVQWSDVKTHKKDILALTVSEDEN-YLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLAL 310 (708)
Q Consensus 232 ~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~ 310 (708)
++++.+..+.+|...|.+++|+|+++ .|++++.||.|++||+...........................|...|.+++|
T Consensus 174 ~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 253 (408)
T 4a11_B 174 KSGSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCF 253 (408)
T ss_dssp SSSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEE
T ss_pred CCcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEE
Confidence 99999999999999999999999998 58899999999999998721000000000000000011222578899999999
Q ss_pred e--CCEEEEEcCCCeEEEEeCCCCceeecC-c----c--CCCCceEEEEcCCcEEEEEcCCeEEEEEecCCCCCCCCCCC
Q psy12614 311 H--GNRLYSGGLDSYLSLSYYPPKTLVKYP-C----T--LAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHS 381 (708)
Q Consensus 311 ~--~~~l~s~~~d~~i~iw~~~~~~~~~~~-~----~--~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~ 381 (708)
+ +.+|++++.|+.|++||+.+....... . . ..............+++.+.++.+.+|++.++.
T Consensus 254 ~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~-------- 325 (408)
T 4a11_B 254 TSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGE-------- 325 (408)
T ss_dssp CTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCC--------
T ss_pred cCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCc--------
Confidence 9 889999999999999999886532211 0 0 111122333445667777899999999998866
Q ss_pred CCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEEEc-CCceEEEEEEec
Q psy12614 382 NTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYST-ESCVRLHSLDLD 434 (708)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~-d~~i~i~~~~~~ 434 (708)
......+|...|.+++|+|++++|+++. ||.|++|++...
T Consensus 326 -------------~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~ 366 (408)
T 4a11_B 326 -------------QITMLKGHYKTVDCCVFQSNFQELYSGSRDCNILAWVPSLY 366 (408)
T ss_dssp -------------EEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEEECC-
T ss_pred -------------ceeeeccCCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCC
Confidence 4445567899999999999999999855 999999999873
|
| >4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-31 Score=261.68 Aligned_cols=278 Identities=13% Similarity=0.114 Sum_probs=221.7
Q ss_pred EEEEEEccCCEEEEEcCCCcEEEEeCCCCeeEEEee--ccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCC
Q psy12614 206 VWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVK--THKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTS 283 (708)
Q Consensus 206 v~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~--~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~ 283 (708)
..+++|++++.|++| .|++|++||+.+++.+..+. +|...|.+++|+|++++|++|+.||.|++|++.+
T Consensus 28 ~~~l~WS~~~~lAvg-~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~-------- 98 (318)
T 4ggc_A 28 LNLVDWSSGNVLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQ-------- 98 (318)
T ss_dssp CBCEEECTTSEEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTT--------
T ss_pred ceEEEECCCCEEEEE-eCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCC--------
Confidence 467899999855554 69999999999999887765 5778899999999999999999999999999998
Q ss_pred CCCCCCcceEEeEEEeccccceEEEEEeCCEEEEEcCCCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEEEcCCe
Q psy12614 284 GPEQGSSVWVRSVNRVIHEGDVKSLALHGNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSH 363 (708)
Q Consensus 284 g~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~ 363 (708)
++ ....+.+|...+.++.+.+..+++++.++.+++|+.....
T Consensus 99 ~~--------~~~~~~~h~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~------------------------------ 140 (318)
T 4ggc_A 99 QK--------RLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAE------------------------------ 140 (318)
T ss_dssp TE--------EEEEEECCSSCEEEEEEETTEEEEEETTSEEEEEETTSSS------------------------------
T ss_pred ce--------eEEEecCccceEEEeecCCCEEEEEecCCceEeeecCCCc------------------------------
Confidence 75 6778889999999988889999999999999888774431
Q ss_pred EEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEEEc-CCceEEEEEEecCCcceeEE
Q psy12614 364 LELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYST-ESCVRLHSLDLDGDKPQISR 442 (708)
Q Consensus 364 i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~-d~~i~i~~~~~~~~~~~~~~ 442 (708)
.......+|...+..+++++++++++++. |+.|++||+.+++.......
T Consensus 141 ------------------------------~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~ 190 (318)
T 4ggc_A 141 ------------------------------HHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQ 190 (318)
T ss_dssp ------------------------------CEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSE
T ss_pred ------------------------------eeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCccccccee
Confidence 22333447788899999999999999855 99999999987543321111
Q ss_pred eecCCcccccceeEEEEEecCCCeEE---EEecCCc--EEEecCCCeEEEEEecCCCCCccCcceEEEEECCCCcEEEEE
Q psy12614 443 IKNLPAPLFKSIFTHVLISADSTLLL---AVSLNGP--LYIIDLSSLEIKYCVDPYKSNLMSDVISLVQMSECKQYIVCA 517 (708)
Q Consensus 443 ~~~~~~~~~~~~i~~~~~s~d~~~l~---~~~~dg~--i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~ 517 (708)
....+ ...|.+++++|++..++ +++.++. +|+.... ........ ...+..+.|+|++..++++
T Consensus 191 --~~~~~--~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~--~~~~~~~~------~~~v~~~~~~~~~~~~~~~ 258 (318)
T 4ggc_A 191 --TFTQH--QGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSG--ACLSAVDA------HSQVCSILWSPHYKELISG 258 (318)
T ss_dssp --EECCC--CSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTC--CEEEEEEC------SSCEEEEEEETTTTEEEEE
T ss_pred --eeccc--CCceEEEEecCCCCcEEEEEecCCCCEEEEEecccc--cccccccc------eeeeeeeeecccccceEEE
Confidence 12223 33677799999876544 3344555 7887766 33333332 5579999999999998876
Q ss_pred e--cCCeEEEEECC--ceeeecCCCCCCceEEEEcCCCCEEEEEecCCcEEEEEcCCCC
Q psy12614 518 D--RKSHVVIWKNG--QHHASLPRYRKPSTAMAIHPTLSTLVTVYSDHRIVEFDLNRKA 572 (708)
Q Consensus 518 ~--~d~~i~iw~~~--~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~dg~i~vwd~~~~~ 572 (708)
+ .|+.|++||+. +....+.+|.+.|++++|+||+++||+++.||+|+|||+.+..
T Consensus 259 sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~~d 317 (318)
T 4ggc_A 259 HGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFELD 317 (318)
T ss_dssp ECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCCC
T ss_pred EEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCCC
Confidence 5 79999999999 4455899999999999999999999999999999999997653
|
| >3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-32 Score=283.16 Aligned_cols=314 Identities=12% Similarity=0.112 Sum_probs=229.1
Q ss_pred CcEEEEEEe--CCEEEEEcCCCcEEEEECCCCe-----------EeEEEeecC------------CceEEEEEecCC--C
Q psy12614 72 NSIECLTWF--NDRLFSGGLQGFVNEYDMRRLN-----------IKSSTAVTS------------GTCWCLSVHKKK--R 124 (708)
Q Consensus 72 ~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~~-----------~~~~~~~~~------------~~v~~~~~s~~~--~ 124 (708)
+.|.+++|+ +++|++|+.||.|++||+.+++ ....+.+|. +.|.+++|+|++ .
T Consensus 29 ~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~~ 108 (447)
T 3dw8_B 29 DIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAA 108 (447)
T ss_dssp GSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSSS
T ss_pred CcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCCcc
Confidence 799999999 8999999999999999999877 578889998 889999999998 7
Q ss_pred EEEEEeCCCcEEEEEccCCcEEE--------------------------------------EEecccccccEEEEEECCC
Q psy12614 125 LLAAGTEQGHINLFQISDEGLLY--------------------------------------EKLLDRQQGRILCTAWHSS 166 (708)
Q Consensus 125 ~la~~~~d~~i~iwd~~~~~~~~--------------------------------------~~~~~~~~~~v~~~~~s~d 166 (708)
+|++++.|+.|++||+.++.... .....+|...|.+++|+|+
T Consensus 109 ~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 188 (447)
T 3dw8_B 109 QFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINSD 188 (447)
T ss_dssp EEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECTT
T ss_pred eEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEcCC
Confidence 99999999999999998654320 0124679999999999999
Q ss_pred CCEEEEecCC-eEEEEEcCC-CceEEEEEecccCCCCCceeEEEEEEccCC-E-EEEEcCCCcEEEEeCCCCee----EE
Q psy12614 167 GDYLVTGCAA-AVRVWDIHK-GHAIHKMSLDKSSKFSKNTAVWCVAFCADF-T-IITGDSGGFVRFWDGKTGVQ----WS 238 (708)
Q Consensus 167 ~~~l~~~~~d-~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~-l~~~~~dg~i~~wd~~~~~~----~~ 238 (708)
+++|+++ .| .|++||+.+ ++.+..+.........|...|.+++|+|++ . +++++.||.|++||+++++. +.
T Consensus 189 ~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 267 (447)
T 3dw8_B 189 YETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSK 267 (447)
T ss_dssp SSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCE
T ss_pred CCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccceee
Confidence 9999998 67 999999984 334433311100000348889999999997 4 99999999999999999886 67
Q ss_pred Eeecccc------------CeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccc--
Q psy12614 239 DVKTHKK------------DILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGD-- 304 (708)
Q Consensus 239 ~~~~~~~------------~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-- 304 (708)
.+.+|.. .|.+++|+|++++|++++. +.|++||+... ++ ....+.+|...
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~-------~~--------~~~~~~~~~~~~~ 331 (447)
T 3dw8_B 268 LFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNME-------NR--------PVETYQVHEYLRS 331 (447)
T ss_dssp EECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCC-------SS--------CSCCEESCGGGTT
T ss_pred EeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCC-------cc--------ccceeeccccccc
Confidence 8887776 8999999999999999998 99999999750 11 23445556432
Q ss_pred -------------eEEEEEe--CCEEEEEcCCCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEEEcCCeEEEEEe
Q psy12614 305 -------------VKSLALH--GNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSL 369 (708)
Q Consensus 305 -------------v~~l~~~--~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~ 369 (708)
+..++|+ +.+|++++.|+.|++||+.+.....+..+..........+.......+..
T Consensus 332 ~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 403 (447)
T 3dw8_B 332 KLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDITLEASRENNKPRTVLKPRKVCASGKR-------- 403 (447)
T ss_dssp THHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEEEECCSTTCCTTCBCCCCCEECSSCC--------
T ss_pred cccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCcceeeeecccccccccccCCccccccCCc--------
Confidence 2348888 88999999999999999988764433311111110000011100000000
Q ss_pred cCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEEEcCCceEEEEE
Q psy12614 370 GSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYSTESCVRLHSL 431 (708)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~d~~i~i~~~ 431 (708)
...............|..++|+|++.+||++..+.+++|..
T Consensus 404 ---------------------~~~~~~~~~~~~~~~i~~~~~~p~~~~la~~~~~~~~~~~~ 444 (447)
T 3dw8_B 404 ---------------------KKDEISVDSLDFNKKILHTAWHPKENIIAVATTNNLYIFQD 444 (447)
T ss_dssp ---------------------CTTCEEGGGCCTTSCCCEEEECSSSSEEEEECSSCEEEEEC
T ss_pred ---------------------ccccccccccccCCceeEEEECCCCCEEEEEecceeeeecc
Confidence 00001111113456789999999999999988777888864
|
| >3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-33 Score=305.30 Aligned_cols=250 Identities=15% Similarity=0.210 Sum_probs=213.3
Q ss_pred eeccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCC--CCeEEEEEecCCCCCcEEEEEEe----CCEEEEEcCCCcE
Q psy12614 20 KFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISE--TPHVDRVFIGDPLSNSIECLTWF----NDRLFSGGLQGFV 93 (708)
Q Consensus 20 ~~~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~--~~~~~~~~~~h~~~~~v~~l~~~----~~~l~s~~~d~~i 93 (708)
.++.+|.+.|++++|+|++++||+|+.||.|+|||+.+ +..+ ..+.+|. ++|.+++|+ +++|++++.||+|
T Consensus 3 ~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~-~~l~~h~--~~V~~l~~s~~~~~~~l~s~s~Dg~I 79 (753)
T 3jro_A 3 VIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLI-DTLTGHE--GPVWRVDWAHPKFGTILASCSYDGKV 79 (753)
T ss_dssp -----CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEE-EEECCCS--SCEEEEEECCTTSCSEEEEEETTSCE
T ss_pred eecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccc-eeccCCc--CceEEEEecCCCCCCEEEEEeCCCeE
Confidence 46789999999999999999999999999999999984 3444 4888999 999999998 6899999999999
Q ss_pred EEEECCCCe--EeEEEeecCCceEEEEEecC--CCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECC----
Q psy12614 94 NEYDMRRLN--IKSSTAVTSGTCWCLSVHKK--KRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHS---- 165 (708)
Q Consensus 94 ~vwd~~~~~--~~~~~~~~~~~v~~~~~s~~--~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~---- 165 (708)
++||+.+++ ....+.+|...|.+++|+|+ ++++++|+.||.|++||+.++.......+.+|...|.+++|+|
T Consensus 80 ~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~ 159 (753)
T 3jro_A 80 LIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIE 159 (753)
T ss_dssp EEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC--
T ss_pred EEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccc
Confidence 999999987 77788899999999999999 9999999999999999999874433356778999999999999
Q ss_pred ---------CCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccC---CE-EEEEcCCCcEEEEeC
Q psy12614 166 ---------SGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCAD---FT-IITGDSGGFVRFWDG 231 (708)
Q Consensus 166 ---------d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~-l~~~~~dg~i~~wd~ 231 (708)
++.+|++++.| .|++||+.++........... .|...|.+++|+|+ +. +++++.||.|++||+
T Consensus 160 ~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~---~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~ 236 (753)
T 3jro_A 160 EDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLE---GHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQ 236 (753)
T ss_dssp -------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEEC---CCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEE
T ss_pred cccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeec---CCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecC
Confidence 58999999999 999999988754322222111 34889999999999 75 899999999999999
Q ss_pred CCCe-----eEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccC
Q psy12614 232 KTGV-----QWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTR 275 (708)
Q Consensus 232 ~~~~-----~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~ 275 (708)
.+++ .......|...|.+++|+|++++|++++.||.|++|++..
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~ 285 (753)
T 3jro_A 237 DNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 285 (753)
T ss_dssp SSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCS
T ss_pred CCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCC
Confidence 8864 3333456889999999999999999999999999999986
|
| >2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-32 Score=276.68 Aligned_cols=284 Identities=14% Similarity=0.151 Sum_probs=229.8
Q ss_pred CcEEEEEEcCCCCEEE-EEeCCCcEEEEeCCCCCe---EEEEEecCCCCCcEEEEEEe---CCEEEEEcCCCcEEEEECC
Q psy12614 27 KVINCIACEPKSSRLA-VSRADQSIEIWDISETPH---VDRVFIGDPLSNSIECLTWF---NDRLFSGGLQGFVNEYDMR 99 (708)
Q Consensus 27 ~~v~~~~~s~~~~~la-~~~~dg~v~iwd~~~~~~---~~~~~~~h~~~~~v~~l~~~---~~~l~s~~~d~~i~vwd~~ 99 (708)
.....++++|+...++ +|+.||.|+||++..... ....+.+|. +.|.+++|+ +++|++++.||+|++||+.
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~--~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~ 112 (402)
T 2aq5_A 35 WDSGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHT--APVLDIAWCPHNDNVIASGSEDCTVMVWEIP 112 (402)
T ss_dssp CSSCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCS--SCEEEEEECTTCTTEEEEEETTSEEEEEECC
T ss_pred cCCCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCC--CCEEEEEeCCCCCCEEEEEeCCCeEEEEEcc
Confidence 3455788999875544 578899999999976421 112678899 999999998 7899999999999999999
Q ss_pred CC-------eEeEEEeecCCceEEEEEecCC-CEEEEEeCCCcEEEEEccCCcEEEEEec--ccccccEEEEEECCCCCE
Q psy12614 100 RL-------NIKSSTAVTSGTCWCLSVHKKK-RLLAAGTEQGHINLFQISDEGLLYEKLL--DRQQGRILCTAWHSSGDY 169 (708)
Q Consensus 100 ~~-------~~~~~~~~~~~~v~~~~~s~~~-~~la~~~~d~~i~iwd~~~~~~~~~~~~--~~~~~~v~~~~~s~d~~~ 169 (708)
++ +++..+.+|...|.+++|+|++ ++|++++.|+.|++||+.+++.. ..+ ..|...|.+++|+|++++
T Consensus 113 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~ 190 (402)
T 2aq5_A 113 DGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAV--LTLGPDVHPDTIYSVDWSRDGAL 190 (402)
T ss_dssp TTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEE--EEECTTTCCSCEEEEEECTTSSC
T ss_pred CCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCcc--EEEecCCCCCceEEEEECCCCCE
Confidence 98 6788899999999999999998 69999999999999999999887 566 789999999999999999
Q ss_pred EEEecCC-eEEEEEcCCCceEEEEEecccCCCCCce-eEEEEEEccCCE-EEEE---cCCCcEEEEeCCCCee-EEEee-
Q psy12614 170 LVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNT-AVWCVAFCADFT-IITG---DSGGFVRFWDGKTGVQ-WSDVK- 241 (708)
Q Consensus 170 l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~-l~~~---~~dg~i~~wd~~~~~~-~~~~~- 241 (708)
|++++.| .|++||+++++.+..+...+ .. .+.+++|+|+++ +++| +.++.|++||+++++. +....
T Consensus 191 l~~~~~d~~i~iwd~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~ 264 (402)
T 2aq5_A 191 ICTSCRDKRVRVIEPRKGTVVAEKDRPH------EGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQEL 264 (402)
T ss_dssp EEEEETTSEEEEEETTTTEEEEEEECSS------CSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEEC
T ss_pred EEEEecCCcEEEEeCCCCceeeeeccCC------CCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEec
Confidence 9999999 99999999999888874331 33 488999999997 6666 6899999999988654 32222
Q ss_pred ccccCeEEEEEeCCCCEEEE-EecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEEE
Q psy12614 242 THKKDILALTVSEDENYLYC-AGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSG 318 (708)
Q Consensus 242 ~~~~~i~~~~~s~~~~~l~~-~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~ 318 (708)
.|...+.+++|+|++++|++ ++.||.|++|++.+ ++ ......... .|...|.+++|+ +.+++
T Consensus 265 ~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~--------~~----~~~~~l~~~-~~~~~v~~~~~sp~~~~~~-- 329 (402)
T 2aq5_A 265 DTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITS--------EA----PFLHYLSMF-SSKESQRGMGYMPKRGLEV-- 329 (402)
T ss_dssp CCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECS--------ST----TCEEEEEEE-CCSSCCSEEEECCGGGSCG--
T ss_pred cCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecC--------CC----cceEeeccc-ccCCcccceEEecccccce--
Confidence 46788999999999999975 45799999999988 43 111122222 256899999999 44444
Q ss_pred cCCCeEEEEeCCCCcee
Q psy12614 319 GLDSYLSLSYYPPKTLV 335 (708)
Q Consensus 319 ~~d~~i~iw~~~~~~~~ 335 (708)
+.++.+++|++.+..+.
T Consensus 330 s~~~~~~~~~l~~~~~~ 346 (402)
T 2aq5_A 330 NKCEIARFYKLHERKCE 346 (402)
T ss_dssp GGTEEEEEEEEETTEEE
T ss_pred ecceeEEEEEcCCCcEE
Confidence 46779999999776533
|
| >2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-31 Score=274.15 Aligned_cols=281 Identities=10% Similarity=0.065 Sum_probs=229.7
Q ss_pred CcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCC---eEEEEEecCC----------------------------------
Q psy12614 27 KVINCIACEPKSSRLAVSRADQSIEIWDISETP---HVDRVFIGDP---------------------------------- 69 (708)
Q Consensus 27 ~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~---~~~~~~~~h~---------------------------------- 69 (708)
.++++++|+|+|++|+++. ++.|.+||+.+++ .+. .+..+.
T Consensus 5 ~p~~~v~~s~dg~~l~~~~-~~~i~v~d~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (450)
T 2vdu_B 5 HPLQNLLTSRDGSLVFAII-KNCILSFKYQSPNHWEFAG-KWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGD 82 (450)
T ss_dssp CCCCEEEECSSSSEEEEEE-TTEEEEEEEETTTEEEEEE-EEECCC----------------------------------
T ss_pred ccEEEEEecCCCCEEEEEe-CCeEEEEECCCCCcceeee-ecCCccccccccccccchhhccccccccccccccccCcCc
Confidence 4688999999999777765 6799999999988 443 333221
Q ss_pred ------------------CCCcEEEEEEe--CCEE-EEEcCCCcEEEEECC--CCeEeEEEe--ecCCceEEEEEecCCC
Q psy12614 70 ------------------LSNSIECLTWF--NDRL-FSGGLQGFVNEYDMR--RLNIKSSTA--VTSGTCWCLSVHKKKR 124 (708)
Q Consensus 70 ------------------~~~~v~~l~~~--~~~l-~s~~~d~~i~vwd~~--~~~~~~~~~--~~~~~v~~~~~s~~~~ 124 (708)
..+.|.+++|+ +++| ++++.||.|++||+. +++.+..+. .|...|.+++|+|+++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~ 162 (450)
T 2vdu_B 83 SIKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDT 162 (450)
T ss_dssp -----------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSS
T ss_pred cccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCC
Confidence 01479999999 7886 899999999999999 888888886 5678999999999999
Q ss_pred EEEEEeCCCcEEEEEccCCcEE--EEEecccccccEEEEEECCC---CCEEEEecCC-eEEEEEcCCCceEEEEEecccC
Q psy12614 125 LLAAGTEQGHINLFQISDEGLL--YEKLLDRQQGRILCTAWHSS---GDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSS 198 (708)
Q Consensus 125 ~la~~~~d~~i~iwd~~~~~~~--~~~~~~~~~~~v~~~~~s~d---~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~ 198 (708)
+|++++.+|.|++|++.+++.. ....+.+|...|.+++|+|+ +++|++++.| .|++||+.+++.+..+..
T Consensus 163 ~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~---- 238 (450)
T 2vdu_B 163 TVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLF---- 238 (450)
T ss_dssp EEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECC----
T ss_pred EEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeec----
Confidence 9999999999999999877653 11267789999999999999 9999999999 999999999988877543
Q ss_pred CCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCeeEEEeec-------------------------cccCeEEEEE
Q psy12614 199 KFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDVKT-------------------------HKKDILALTV 252 (708)
Q Consensus 199 ~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~~~-------------------------~~~~i~~~~~ 252 (708)
+|...|.+++|+ ++. +++++.|+.|++||+.+++.+..+.. ....|.+++|
T Consensus 239 --~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~ 315 (450)
T 2vdu_B 239 --GHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIK 315 (450)
T ss_dssp --CCSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEE
T ss_pred --CCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEE
Confidence 338899999999 884 89999999999999999998887763 2357899999
Q ss_pred eCCCCEEEEEe-cCCeEEEEEc--cCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe-CCEEEEEcC-------C
Q psy12614 253 SEDENYLYCAG-VDPTVVCFQR--TRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH-GNRLYSGGL-------D 321 (708)
Q Consensus 253 s~~~~~l~~~~-~dg~i~iw~~--~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~-~~~l~s~~~-------d 321 (708)
+|++++|++++ .++.|++|++ .. + ..+.....+..| ..|.+++|+ +..+++.+. +
T Consensus 316 ~~~~~~l~~~~~~d~~i~iw~~~~~~--------~-----~~l~~~~~~~~~-~~v~~~~~~~~~~~v~~~~~~~~~~~~ 381 (450)
T 2vdu_B 316 SKNLPFVAFFVEATKCIIILEMSEKQ--------K-----GDLALKQIITFP-YNVISLSAHNDEFQVTLDNKESSGVQK 381 (450)
T ss_dssp CSSSSEEEEEETTCSEEEEEEECSSS--------T-----TCEEEEEEEECS-SCEEEEEEETTEEEEEECCTTCCSSCC
T ss_pred eCCCCEEEEEECCCCeEEEEEeccCC--------C-----CceeeccEeccC-CceEEEEecCCcEEEEEecccCCCCCC
Confidence 99999999998 8999999999 33 2 123356667777 889999999 555555543 4
Q ss_pred CeEEEEeCC
Q psy12614 322 SYLSLSYYP 330 (708)
Q Consensus 322 ~~i~iw~~~ 330 (708)
..|.+|.+.
T Consensus 382 ~~i~v~~~~ 390 (450)
T 2vdu_B 382 NFAKFIEYN 390 (450)
T ss_dssp CSEEEEEEE
T ss_pred cceEEEEEE
Confidence 456777653
|
| >3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-31 Score=264.38 Aligned_cols=211 Identities=11% Similarity=0.167 Sum_probs=180.7
Q ss_pred EEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECCCC----eEeEEEeecCCceEEEEEec--CCCEEEEEeCCCc
Q psy12614 63 RVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMRRL----NIKSSTAVTSGTCWCLSVHK--KKRLLAAGTEQGH 134 (708)
Q Consensus 63 ~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~----~~~~~~~~~~~~v~~~~~s~--~~~~la~~~~d~~ 134 (708)
..+.+|. +.|++++|+ +++|++++.||.|++||+.++ +....+.+|...|.+++|+| ++++|++++.||.
T Consensus 5 ~~~~gH~--~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~ 82 (351)
T 3f3f_A 5 PFDSGHD--DLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKT 82 (351)
T ss_dssp CEECCCS--SCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSC
T ss_pred ccCcccc--cceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCe
Confidence 3788999 999999999 889999999999999999976 56777889999999999999 6999999999999
Q ss_pred EEEEEccCCcE-------EEEEecccccccEEEEEECCC--CCEEEEecCC-eEEEEEcCCCceEEEEEecc------cC
Q psy12614 135 INLFQISDEGL-------LYEKLLDRQQGRILCTAWHSS--GDYLVTGCAA-AVRVWDIHKGHAIHKMSLDK------SS 198 (708)
Q Consensus 135 i~iwd~~~~~~-------~~~~~~~~~~~~v~~~~~s~d--~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~------~~ 198 (708)
|++||+.+++. .....+..|...|.+++|+|+ +++|++++.| .|++||+.+++.+..+.... ..
T Consensus 83 v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~ 162 (351)
T 3f3f_A 83 VKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIP 162 (351)
T ss_dssp EEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCC
T ss_pred EEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccc
Confidence 99999988631 223678889999999999999 9999999999 99999999877544333210 00
Q ss_pred CCCCceeEEEEEEccC---C-EEEEEcCCCcEEEEeCCCCee--EEEeeccccCeEEEEEeCCC----CEEEEEecCCeE
Q psy12614 199 KFSKNTAVWCVAFCAD---F-TIITGDSGGFVRFWDGKTGVQ--WSDVKTHKKDILALTVSEDE----NYLYCAGVDPTV 268 (708)
Q Consensus 199 ~~~~~~~v~~~~~~~~---~-~l~~~~~dg~i~~wd~~~~~~--~~~~~~~~~~i~~~~~s~~~----~~l~~~~~dg~i 268 (708)
...+...+.+++|+|+ + .+++++.++.+.+|+...++. +..+.+|...|.+++|+|++ ++|++++.||.|
T Consensus 163 ~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i 242 (351)
T 3f3f_A 163 PANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRI 242 (351)
T ss_dssp CSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCE
T ss_pred cCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeE
Confidence 0033778999999997 5 499999999999998887765 67788899999999999998 899999999999
Q ss_pred EEEEccC
Q psy12614 269 VCFQRTR 275 (708)
Q Consensus 269 ~iw~~~~ 275 (708)
++||+..
T Consensus 243 ~iwd~~~ 249 (351)
T 3f3f_A 243 RIFKITE 249 (351)
T ss_dssp EEEEEEE
T ss_pred EEEeCCC
Confidence 9999987
|
| >3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-31 Score=269.05 Aligned_cols=250 Identities=13% Similarity=0.183 Sum_probs=214.6
Q ss_pred EEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECC--CCeEeEEEeecCCceEEEEEecC--CCEEEEEeCCCcEEE
Q psy12614 64 VFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMR--RLNIKSSTAVTSGTCWCLSVHKK--KRLLAAGTEQGHINL 137 (708)
Q Consensus 64 ~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~--~~~~~~~~~~~~~~v~~~~~s~~--~~~la~~~~d~~i~i 137 (708)
.+.+|. ..|.+++|+ +++|++++.||.|++||+. +++.+..+.+|.+.|++++|+++ +++|++++.||.|++
T Consensus 6 ~~~~h~--~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~i 83 (379)
T 3jrp_A 6 IANAHN--ELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLI 83 (379)
T ss_dssp CEEECC--CCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEE
T ss_pred EecCCc--ccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEE
Confidence 788999 999999999 8999999999999999998 56778889999999999999987 999999999999999
Q ss_pred EEccCCcEEEEEecccccccEEEEEECCC--CCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEcc-
Q psy12614 138 FQISDEGLLYEKLLDRQQGRILCTAWHSS--GDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCA- 213 (708)
Q Consensus 138 wd~~~~~~~~~~~~~~~~~~v~~~~~s~d--~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~- 213 (708)
||+.+++......+..|...|.+++|+|+ +.+|++++.| .|++||+.++......... .+...|.+++|+|
T Consensus 84 wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~-----~~~~~v~~~~~~~~ 158 (379)
T 3jrp_A 84 WKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIID-----AHAIGVNSASWAPA 158 (379)
T ss_dssp EEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEE-----CCTTCEEEEEECCC
T ss_pred EEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEec-----CCCCceEEEEEcCc
Confidence 99999985545778889999999999999 9999999999 9999999987544333332 4488899999999
Q ss_pred ------------CC-EEEEEcCCCcEEEEeCCCCe----eEEEeeccccCeEEEEEeCC---CCEEEEEecCCeEEEEEc
Q psy12614 214 ------------DF-TIITGDSGGFVRFWDGKTGV----QWSDVKTHKKDILALTVSED---ENYLYCAGVDPTVVCFQR 273 (708)
Q Consensus 214 ------------~~-~l~~~~~dg~i~~wd~~~~~----~~~~~~~~~~~i~~~~~s~~---~~~l~~~~~dg~i~iw~~ 273 (708)
++ .+++++.||.|++||++++. ....+.+|...|.+++|+|+ +++|++++.||.|++||+
T Consensus 159 ~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~ 238 (379)
T 3jrp_A 159 TIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQ 238 (379)
T ss_dssp C----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEE
T ss_pred cccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeC
Confidence 56 49999999999999997764 45677889999999999999 899999999999999999
Q ss_pred cCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEEEcCCCeEEEEeCCC
Q psy12614 274 TRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSGGLDSYLSLSYYPP 331 (708)
Q Consensus 274 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~ 331 (708)
.. ++ ............|...|.+++|+ +.+|++++.||.|++|++..
T Consensus 239 ~~--------~~---~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~ 287 (379)
T 3jrp_A 239 DN--------EQ---GPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 287 (379)
T ss_dssp SS--------TT---SCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEE
T ss_pred CC--------CC---ccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCC
Confidence 88 42 00011222233488899999998 88999999999999999864
|
| >1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-31 Score=263.10 Aligned_cols=244 Identities=13% Similarity=0.108 Sum_probs=203.2
Q ss_pred EEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECCCCe---EeEEEeecCCceEEEEEecCCC-EEEEEeCCCcEEE
Q psy12614 64 VFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMRRLN---IKSSTAVTSGTCWCLSVHKKKR-LLAAGTEQGHINL 137 (708)
Q Consensus 64 ~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~~---~~~~~~~~~~~v~~~~~s~~~~-~la~~~~d~~i~i 137 (708)
...+|. +.|.+++|+ +++|++++.|+.|++||+.+++ ....+..|...|.+++|+|+++ +|++++.||.|++
T Consensus 6 ~~~~h~--~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~ 83 (342)
T 1yfq_A 6 IEQAPK--DYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILK 83 (342)
T ss_dssp CSSCCS--SCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEE
T ss_pred cccCCC--CcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEE
Confidence 445788 999999999 8999999999999999998877 4555668999999999999999 9999999999999
Q ss_pred EEc-cCCcEEEEEeccc--ccccEEEEEECCCCCEEEEecCC-eEEEEEcCC---------CceEEEEEecccCCCCCce
Q psy12614 138 FQI-SDEGLLYEKLLDR--QQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHK---------GHAIHKMSLDKSSKFSKNT 204 (708)
Q Consensus 138 wd~-~~~~~~~~~~~~~--~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~---------~~~~~~~~~~~~~~~~~~~ 204 (708)
||+ .+++. ..+.+ |...|.+++|+| +++|++++.| .|++||+.+ ++.+..+ .+..
T Consensus 84 wd~~~~~~~---~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~--------~~~~ 151 (342)
T 1yfq_A 84 VDLIGSPSF---QALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNT--------KVKN 151 (342)
T ss_dssp ECSSSSSSE---EECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSS--------SSCC
T ss_pred EEeccCCce---EeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEE--------eeCC
Confidence 999 88876 56778 999999999999 9999999999 999999986 4444333 2378
Q ss_pred eEEEEEEccCCEEEEEcCCCcEEEEeCCC-Ce--eEEEeeccccCeEEEEEeC-CCCEEEEEecCCeEEEEEccCCcccc
Q psy12614 205 AVWCVAFCADFTIITGDSGGFVRFWDGKT-GV--QWSDVKTHKKDILALTVSE-DENYLYCAGVDPTVVCFQRTRKPQVC 280 (708)
Q Consensus 205 ~v~~~~~~~~~~l~~~~~dg~i~~wd~~~-~~--~~~~~~~~~~~i~~~~~s~-~~~~l~~~~~dg~i~iw~~~~~~~~~ 280 (708)
.+.+++|+|++ +++++.++.|++||+++ +. .......|...+.+++|+| +++++++++.||.+++|++..
T Consensus 152 ~v~~~~~~~~~-l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~----- 225 (342)
T 1yfq_A 152 KIFTMDTNSSR-LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDD----- 225 (342)
T ss_dssp CEEEEEECSSE-EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCT-----
T ss_pred ceEEEEecCCc-EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcC-----
Confidence 89999999998 99999999999999988 54 3334456888999999999 999999999999999999987
Q ss_pred cCCCCCCCCcceEEeEEEecccc---------ceEEEEEe--CCEEEEEcCCCeEEEEeCCCC
Q psy12614 281 STSGPEQGSSVWVRSVNRVIHEG---------DVKSLALH--GNRLYSGGLDSYLSLSYYPPK 332 (708)
Q Consensus 281 ~~~g~~~~~~~~~~~~~~~~~~~---------~v~~l~~~--~~~l~s~~~d~~i~iw~~~~~ 332 (708)
+.. .........+..|.. .|.+++|+ +.+|++++.||.|++||+.+.
T Consensus 226 ---~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~ 283 (342)
T 1yfq_A 226 ---QGD--DYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTR 283 (342)
T ss_dssp ---TCC--STTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTT
T ss_pred ---CCc--ccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccH
Confidence 300 000002344556644 88999888 788888999999888887654
|
| >2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A | Back alignment and structure |
|---|
Probab=99.98 E-value=3.2e-31 Score=271.64 Aligned_cols=244 Identities=14% Similarity=0.242 Sum_probs=210.5
Q ss_pred eeeccCCCCcEEEEEEcC-CCCEEEEEeCCCcEEEEeCCCC-------CeEEEEEecCCCCCcEEEEEEe--C-CEEEEE
Q psy12614 19 IKFYAPEPKVINCIACEP-KSSRLAVSRADQSIEIWDISET-------PHVDRVFIGDPLSNSIECLTWF--N-DRLFSG 87 (708)
Q Consensus 19 ~~~~~~h~~~v~~~~~s~-~~~~la~~~~dg~v~iwd~~~~-------~~~~~~~~~h~~~~~v~~l~~~--~-~~l~s~ 87 (708)
...+.+|.+.|++++|+| ++++||+|+.||.|+|||+.++ +.+. .+.+|. ..|.+++|+ + ++|+++
T Consensus 74 ~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~-~~~~h~--~~v~~~~~~p~~~~~l~s~ 150 (402)
T 2aq5_A 74 VPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVI-TLEGHT--KRVGIVAWHPTAQNVLLSA 150 (402)
T ss_dssp CCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSE-EEECCS--SCEEEEEECSSBTTEEEEE
T ss_pred CceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceE-EecCCC--CeEEEEEECcCCCCEEEEE
Confidence 345789999999999999 9999999999999999999987 4444 889999 999999999 4 699999
Q ss_pred cCCCcEEEEECCCCeEeEEE--eecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEec-cccccc-EEEEEE
Q psy12614 88 GLQGFVNEYDMRRLNIKSST--AVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLL-DRQQGR-ILCTAW 163 (708)
Q Consensus 88 ~~d~~i~vwd~~~~~~~~~~--~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~-~~~~~~-v~~~~~ 163 (708)
+.||.|++||+.+++.+..+ ..|...|.+++|+|++++|++++.|+.|++||+.+++.. ..+ ..|.+. +.+++|
T Consensus 151 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~--~~~~~~~~~~~~~~~~~ 228 (402)
T 2aq5_A 151 GCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVV--AEKDRPHEGTRPVHAVF 228 (402)
T ss_dssp ETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEE--EEEECSSCSSSCCEEEE
T ss_pred cCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCcee--eeeccCCCCCcceEEEE
Confidence 99999999999999999999 789999999999999999999999999999999998876 455 677665 899999
Q ss_pred CCCCCEEEEe---cCC-eEEEEEcCCCce-EEEEEecccCCCCCceeEEEEEEccCCE-E-EEEcCCCcEEEEeCCCCee
Q psy12614 164 HSSGDYLVTG---CAA-AVRVWDIHKGHA-IHKMSLDKSSKFSKNTAVWCVAFCADFT-I-ITGDSGGFVRFWDGKTGVQ 236 (708)
Q Consensus 164 s~d~~~l~~~---~~d-~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l-~~~~~dg~i~~wd~~~~~~ 236 (708)
+|++++|+++ +.+ .|++||+.+++. +..... .+...+.+++|+|++. + ++++.||.|++||+.+++.
T Consensus 229 ~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~------~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~ 302 (402)
T 2aq5_A 229 VSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQEL------DTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAP 302 (402)
T ss_dssp CSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEEC------CCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTT
T ss_pred cCCCcEEEEeccCCCCceEEEEcCccccCCceEEec------cCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCc
Confidence 9999999999 788 999999998765 333332 2267799999999995 5 4667899999999998874
Q ss_pred -EEEeec--cccCeEEEEEeCCCCEEEEEecCCeEEEEEccC
Q psy12614 237 -WSDVKT--HKKDILALTVSEDENYLYCAGVDPTVVCFQRTR 275 (708)
Q Consensus 237 -~~~~~~--~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~ 275 (708)
+..+.. |...|.+++|+|++.++++ .++.+++|++.+
T Consensus 303 ~~~~l~~~~~~~~v~~~~~sp~~~~~~s--~~~~~~~~~l~~ 342 (402)
T 2aq5_A 303 FLHYLSMFSSKESQRGMGYMPKRGLEVN--KCEIARFYKLHE 342 (402)
T ss_dssp CEEEEEEECCSSCCSEEEECCGGGSCGG--GTEEEEEEEEET
T ss_pred ceEeecccccCCcccceEEeccccccee--cceeEEEEEcCC
Confidence 444444 4589999999999988764 567999999987
|
| >3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.98 E-value=1.5e-30 Score=263.70 Aligned_cols=302 Identities=13% Similarity=0.197 Sum_probs=226.8
Q ss_pred EEECCCCeEeEEEeecCCceEEEEEecC---CCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEE
Q psy12614 95 EYDMRRLNIKSSTAVTSGTCWCLSVHKK---KRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLV 171 (708)
Q Consensus 95 vwd~~~~~~~~~~~~~~~~v~~~~~s~~---~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~ 171 (708)
.|+....+.+..+.+|.+.|++++|+|+ |++|++|+.||.|++||+.+........+.+|.+.|.+++|+|++++|+
T Consensus 23 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 102 (368)
T 3mmy_A 23 TDNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVF 102 (368)
T ss_dssp CCSSCTTCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEE
T ss_pred cCCCCCcceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEE
Confidence 4556667788888999999999999999 5999999999999999999733333367888999999999999999999
Q ss_pred EecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEE--ccCCE-EEEEcCCCcEEEEeCCCCeeEEEeeccccCe
Q psy12614 172 TGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAF--CADFT-IITGDSGGFVRFWDGKTGVQWSDVKTHKKDI 247 (708)
Q Consensus 172 ~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i 247 (708)
+++.| .|++||+.+++.+... .+...|.+++| +|++. +++++.||.|++||+++++.+..+..+. .+
T Consensus 103 s~~~dg~v~iwd~~~~~~~~~~--------~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~-~~ 173 (368)
T 3mmy_A 103 TASCDKTAKMWDLSSNQAIQIA--------QHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPE-RC 173 (368)
T ss_dssp EEETTSEEEEEETTTTEEEEEE--------ECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSS-CE
T ss_pred EEcCCCcEEEEEcCCCCceeec--------cccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCC-Cc
Confidence 99999 9999999998877643 23788999999 88886 8999999999999999999988888654 66
Q ss_pred EEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CC----EEEEEcCC
Q psy12614 248 LALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GN----RLYSGGLD 321 (708)
Q Consensus 248 ~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~----~l~s~~~d 321 (708)
.++.+.+ ..+++++.++.+.+|++.. .. ..+ ......+...+..+++. .. .+++++.|
T Consensus 174 ~~~~~~~--~~~~~~~~~~~i~~~~~~~--------~~----~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 237 (368)
T 3mmy_A 174 YCADVIY--PMAVVATAERGLIVYQLEN--------QP----SEF--RRIESPLKHQHRCVAIFKDKQNKPTGFALGSIE 237 (368)
T ss_dssp EEEEEET--TEEEEEEGGGCEEEEECSS--------SC----EEE--EECCCSCSSCEEEEEEEECTTSCEEEEEEEETT
T ss_pred eEEEecC--CeeEEEeCCCcEEEEEecc--------cc----chh--hhccccccCCCceEEEcccCCCCCCeEEEecCC
Confidence 6666664 4788999999999999987 32 111 11112233444555444 33 39999999
Q ss_pred CeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEEEcCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEec
Q psy12614 322 SYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAV 401 (708)
Q Consensus 322 ~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (708)
+.+++|++......... ..+...... ........
T Consensus 238 g~i~i~~~~~~~~~~~~--------------------------~~~~~~~~~--------------------~~~~~~~~ 271 (368)
T 3mmy_A 238 GRVAIHYINPPNPAKDN--------------------------FTFKCHRSN--------------------GTNTSAPQ 271 (368)
T ss_dssp SEEEEEESSCSCHHHHS--------------------------EEEECSEEC------------------------CCCE
T ss_pred CcEEEEecCCCCccccc--------------------------eeeeeeecc--------------------cccccccc
Confidence 99999999765321111 000000000 00001112
Q ss_pred CCCceEEEEeCCCCcEEEEE-cCCceEEEEEEecCCcceeEEeecCCcccccceeEEEEEecCCCeEEEEecCCc
Q psy12614 402 NNATIRCSVVSNDGKYVAYS-TESCVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVLISADSTLLLAVSLNGP 475 (708)
Q Consensus 402 ~~~~i~~~~~s~~g~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~~~~~dg~ 475 (708)
+...|.+++|+|++++|+++ .||.|++||+.. .. .+.. +..|.. .|++++|+|||++|++++.|+.
T Consensus 272 ~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~--~~-~~~~---~~~~~~--~v~~~~~s~~g~~l~~~s~d~~ 338 (368)
T 3mmy_A 272 DIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDA--RT-KLKT---SEQLDQ--PISACCFNHNGNIFAYASSYDW 338 (368)
T ss_dssp EECCEEEEEECTTTCCEEEEETTSCEEEEETTT--TE-EEEE---CCCCSS--CEEEEEECTTSSCEEEEECCCS
T ss_pred cccceEEEEEecCCCEEEEEccCCeEEEEECCC--Cc-EEEE---ecCCCC--CceEEEECCCCCeEEEEecccc
Confidence 33579999999999999985 499999999875 32 2333 666655 7888999999999999999876
|
| >1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3 | Back alignment and structure |
|---|
Probab=99.98 E-value=3.4e-28 Score=248.52 Aligned_cols=262 Identities=13% Similarity=0.100 Sum_probs=217.8
Q ss_pred CEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEE-EEEcCCCcEEEEECCCCeEeEEEeecCCceE
Q psy12614 39 SRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRL-FSGGLQGFVNEYDMRRLNIKSSTAVTSGTCW 115 (708)
Q Consensus 39 ~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l-~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~ 115 (708)
.++++++.|+.|++||+.+++.+. .+.+|. .+.+++|+ +++| ++++.|+.|++||+.+++.+..+..+. .+.
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~~~~~-~~~~~~---~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~ 77 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSNKVTA-TIPVGS---NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQ 77 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEE-EEECSS---SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEE
T ss_pred EEEEEcCCCCEEEEEECCCCeEEE-EeecCC---CcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-Ccc
Confidence 467888899999999999988776 777665 58999999 7766 677799999999999999998888665 899
Q ss_pred EEEEecCCCEEEEEe-CCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEE-EEecCC-eEEEEEcCCCceEEEE
Q psy12614 116 CLSVHKKKRLLAAGT-EQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYL-VTGCAA-AVRVWDIHKGHAIHKM 192 (708)
Q Consensus 116 ~~~~s~~~~~la~~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l-~~~~~d-~i~iwd~~~~~~~~~~ 192 (708)
+++|+|++++|++++ .++.|++||+.+++.. ..+.. ...+.+++|+|++++| ++++.+ .|++||+.+++.+..+
T Consensus 78 ~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~--~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~ 154 (391)
T 1l0q_A 78 GVAVSPDGKQVYVTNMASSTLSVIDTTSNTVA--GTVKT-GKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTV 154 (391)
T ss_dssp EEEECTTSSEEEEEETTTTEEEEEETTTTEEE--EEEEC-SSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred ceEECCCCCEEEEEECCCCEEEEEECCCCeEE--EEEeC-CCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEE
Confidence 999999999886555 5799999999999876 34443 4568999999999988 677777 9999999999988777
Q ss_pred EecccCCCCCceeEEEEEEccCCE-E-EEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEe---cCCe
Q psy12614 193 SLDKSSKFSKNTAVWCVAFCADFT-I-ITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAG---VDPT 267 (708)
Q Consensus 193 ~~~~~~~~~~~~~v~~~~~~~~~~-l-~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~---~dg~ 267 (708)
.. ...+.+++|+|+++ + ++++.++.|++||+++++.+..+. +...+.+++|+|++++|++++ .++.
T Consensus 155 ~~--------~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~~~ 225 (391)
T 1l0q_A 155 SV--------GRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVK-VEAAPSGIAVNPEGTKAYVTNVDKYFNT 225 (391)
T ss_dssp EC--------CSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE-CSSEEEEEEECTTSSEEEEEEECSSCCE
T ss_pred ec--------CCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEe-cCCCccceEECCCCCEEEEEecCcCCCc
Confidence 64 34468999999995 4 677889999999999998887776 556889999999999999888 6899
Q ss_pred EEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEE-EEEcCCCeEEEEeCCCCce
Q psy12614 268 VVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRL-YSGGLDSYLSLSYYPPKTL 334 (708)
Q Consensus 268 i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l-~s~~~d~~i~iw~~~~~~~ 334 (708)
|++||+.+ ++ ....+..|. .+.+++|+ ++.+ ++++.|+.|++||+.+..+
T Consensus 226 v~~~d~~~--------~~--------~~~~~~~~~-~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~~ 278 (391)
T 1l0q_A 226 VSMIDTGT--------NK--------ITARIPVGP-DPAGIAVTPDGKKVYVALSFXNTVSVIDTATNTI 278 (391)
T ss_dssp EEEEETTT--------TE--------EEEEEECCS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEE
T ss_pred EEEEECCC--------Ce--------EEEEEecCC-CccEEEEccCCCEEEEEcCCCCEEEEEECCCCcE
Confidence 99999988 54 445555543 57889998 6666 6778999999999998763
|
| >2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B | Back alignment and structure |
|---|
Probab=99.98 E-value=1.5e-30 Score=268.51 Aligned_cols=243 Identities=13% Similarity=0.210 Sum_probs=211.3
Q ss_pred eccCCCCcEEEEEEcCC-CCEEEEEeCCCcEEEEeCCC----------CCeEEEEEecCCCCCcEEEEEEe--CC-EEEE
Q psy12614 21 FYAPEPKVINCIACEPK-SSRLAVSRADQSIEIWDISE----------TPHVDRVFIGDPLSNSIECLTWF--ND-RLFS 86 (708)
Q Consensus 21 ~~~~h~~~v~~~~~s~~-~~~la~~~~dg~v~iwd~~~----------~~~~~~~~~~h~~~~~v~~l~~~--~~-~l~s 86 (708)
...+|.+.|++++|+|+ +.+||+|+.||.|+|||+.+ ...+. .+.+|. ..|.+++|+ +. +|++
T Consensus 123 ~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~-~~~~h~--~~v~~l~~~~~~~~~l~s 199 (430)
T 2xyi_A 123 IKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDL-RLRGHQ--KEGYGLSWNPNLNGYLLS 199 (430)
T ss_dssp EEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSE-EEECCS--SCCCCEEECTTSTTEEEE
T ss_pred EEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcE-EecCCC--CCeEEEEeCCCCCCeEEE
Confidence 34679999999999997 78999999999999999986 44444 888999 999999999 55 9999
Q ss_pred EcCCCcEEEEECCCCeE-------eEEEeecCCceEEEEEec-CCCEEEEEeCCCcEEEEEccCC---cEEEEEeccccc
Q psy12614 87 GGLQGFVNEYDMRRLNI-------KSSTAVTSGTCWCLSVHK-KKRLLAAGTEQGHINLFQISDE---GLLYEKLLDRQQ 155 (708)
Q Consensus 87 ~~~d~~i~vwd~~~~~~-------~~~~~~~~~~v~~~~~s~-~~~~la~~~~d~~i~iwd~~~~---~~~~~~~~~~~~ 155 (708)
++.||.|++||+.++.. ...+.+|...|.+++|+| ++.+|++++.|+.|++||+.++ ... ..+..|.
T Consensus 200 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~--~~~~~~~ 277 (430)
T 2xyi_A 200 ASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPS--HTVDAHT 277 (430)
T ss_dssp ECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCS--EEEECCS
T ss_pred EeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcce--eEeecCC
Confidence 99999999999988432 456778999999999999 6789999999999999999976 333 4566899
Q ss_pred ccEEEEEECCCCC-EEEEecCC-eEEEEEcCC-CceEEEEEecccCCCCCceeEEEEEEccCCE--EEEEcCCCcEEEEe
Q psy12614 156 GRILCTAWHSSGD-YLVTGCAA-AVRVWDIHK-GHAIHKMSLDKSSKFSKNTAVWCVAFCADFT--IITGDSGGFVRFWD 230 (708)
Q Consensus 156 ~~v~~~~~s~d~~-~l~~~~~d-~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--l~~~~~dg~i~~wd 230 (708)
..|.+++|+|++. +|++++.| .|++||+++ +..+..+.. |...|.+++|+|++. +++++.||.|++||
T Consensus 278 ~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~-------h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd 350 (430)
T 2xyi_A 278 AEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFES-------HKDEIFQVQWSPHNETILASSGTDRRLHVWD 350 (430)
T ss_dssp SCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEC-------CSSCEEEEEECSSCTTEEEEEETTSCCEEEE
T ss_pred CCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeec-------CCCCEEEEEECCCCCCEEEEEeCCCcEEEEe
Confidence 9999999999997 68899999 999999998 455666653 378999999999983 88999999999999
Q ss_pred CCC--------------CeeEEEeeccccCeEEEEEeCCCC-EEEEEecCCeEEEEEccC
Q psy12614 231 GKT--------------GVQWSDVKTHKKDILALTVSEDEN-YLYCAGVDPTVVCFQRTR 275 (708)
Q Consensus 231 ~~~--------------~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~~dg~i~iw~~~~ 275 (708)
+.. .+.+..+.+|...|.+++|+|+++ +|++++.||.|++|++..
T Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~ 410 (430)
T 2xyi_A 351 LSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAE 410 (430)
T ss_dssp GGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECH
T ss_pred CCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEccc
Confidence 976 366777888999999999999998 899999999999999976
|
| >3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-29 Score=254.34 Aligned_cols=287 Identities=12% Similarity=0.081 Sum_probs=206.4
Q ss_pred eccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEE-EEEcCCCcEEEEE
Q psy12614 21 FYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRL-FSGGLQGFVNEYD 97 (708)
Q Consensus 21 ~~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l-~s~~~d~~i~vwd 97 (708)
.+..|.+.|++++|+|||++||+|+.+| ++|||..+++... .. +. ..+..+++. ++.+ ++++.|++|++||
T Consensus 14 ~~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~-~~--~~--~~~~~~~~~~~~~~~~~~~~~d~~v~iWd 87 (355)
T 3vu4_A 14 PENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIM-SQ--EM--RHLSKVRMLHRTNYVAFVTGVKEVVHIWD 87 (355)
T ss_dssp -----CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEE-EE--EC--SCCCEEEECTTSSEEEEECSSTTEEEEEE
T ss_pred ccccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcceee-ee--ec--CCeEEEEEcCCCCEEEEEECCccEEEEEE
Confidence 4578999999999999999999998774 8899998866543 22 22 235566666 6666 5678889999999
Q ss_pred CCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCC-cEEEEEecccccccEEEEEECCCCCEEEE--ec
Q psy12614 98 MRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDE-GLLYEKLLDRQQGRILCTAWHSSGDYLVT--GC 174 (708)
Q Consensus 98 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~-~~~~~~~~~~~~~~v~~~~~s~d~~~l~~--~~ 174 (708)
+.+++++..+. +...|.+++|+++. ++++ .++.|++||+.++ +.+ ..+.. ....+++++ .++++ ++
T Consensus 88 ~~~~~~~~~~~-~~~~v~~v~~~~~~--~~~~-~~~~i~i~d~~~~~~~~--~~~~~---~~~~~~~s~--~~la~~sg~ 156 (355)
T 3vu4_A 88 DVKKQDVSRIK-VDAPVKDLFLSREF--IVVS-YGDVISVFKFGNPWKRI--TDDIR---FGGVCEFSN--GLLVYSNEF 156 (355)
T ss_dssp TTTTEEEEEEE-CSSCEEEEEECSSE--EEEE-ETTEEEEEESSTTCCBS--SCCEE---EEEEEEEET--TEEEEEESS
T ss_pred CCCCcEEEEEE-CCCceEEEEEcCCE--EEEE-EcCEEEEEECCCCceee--EEecc---CCceEEEEc--cEEEEeCCC
Confidence 99999998887 56799999999874 4443 4789999999987 443 33332 444566777 66766 46
Q ss_pred CC-eEEEEEcCCCce----------------EEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCc-EEEEeCCCCe
Q psy12614 175 AA-AVRVWDIHKGHA----------------IHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGF-VRFWDGKTGV 235 (708)
Q Consensus 175 ~d-~i~iwd~~~~~~----------------~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~-i~~wd~~~~~ 235 (708)
.+ .|++||+.++.. +..+. +|...|.+++|+|+|+ +++++.||+ |++||+++++
T Consensus 157 ~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~-------~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~ 229 (355)
T 3vu4_A 157 NLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIK-------AHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGV 229 (355)
T ss_dssp CTTCEEEEECCC------------------CCEEEC-------CCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCC
T ss_pred cCcEEEEEECCCCCccccccccccccccCcccEEEE-------ccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCc
Confidence 67 999999988651 33333 4589999999999995 999999998 9999999999
Q ss_pred eEEEee-c-cccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccC--CC---CCCCCcce--EEeEEEeccccceE
Q psy12614 236 QWSDVK-T-HKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCST--SG---PEQGSSVW--VRSVNRVIHEGDVK 306 (708)
Q Consensus 236 ~~~~~~-~-~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~--~g---~~~~~~~~--~~~~~~~~~~~~v~ 306 (708)
.+..+. + |...|.+++|+|++++|++++.|+.|++||+......... .+ .......| ........+.....
T Consensus 230 ~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (355)
T 3vu4_A 230 LVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGC 309 (355)
T ss_dssp EEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCC
T ss_pred EEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCce
Confidence 999998 5 9999999999999999999999999999999861100000 00 00000000 00000111222346
Q ss_pred EEEEe--CCEEEEEcCCCeEEEEeCCC
Q psy12614 307 SLALH--GNRLYSGGLDSYLSLSYYPP 331 (708)
Q Consensus 307 ~l~~~--~~~l~s~~~d~~i~iw~~~~ 331 (708)
.++|+ ++.+++++.||.+++|++..
T Consensus 310 ~~a~~~d~~~l~~~~~dg~~~~~~~~~ 336 (355)
T 3vu4_A 310 KIAWISESSLVVVWPHTRMIETFKVVF 336 (355)
T ss_dssp EEEESSSSEEEEEETTTTEEEEEEEEE
T ss_pred EEEEeCCCCEEEEEeCCCeEEEEEEEc
Confidence 67888 77899999999999998753
|
| >3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.8e-28 Score=254.36 Aligned_cols=274 Identities=12% Similarity=0.079 Sum_probs=230.7
Q ss_pred CcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEE----EEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECCC
Q psy12614 27 KVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDR----VFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMRR 100 (708)
Q Consensus 27 ~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~----~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~ 100 (708)
..+.+++|+|++.++++++.++.|++||+.+++.... .+.+|. ..|.+++|+ +..+++++.|+.|++||+.+
T Consensus 123 ~~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~ 200 (433)
T 3bws_A 123 FQPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKL--GFVETISIPEHNELWVSQMQANAVHVFDLKT 200 (433)
T ss_dssp SCBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTC--CEEEEEEEGGGTEEEEEEGGGTEEEEEETTT
T ss_pred CCceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccC--CceeEEEEcCCCEEEEEECCCCEEEEEECCC
Confidence 4566999999878888888889999999999887642 234787 899999998 88899999999999999999
Q ss_pred CeEeEEEeecCCceEEEEEecCCCEEEEEe-CCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEec-----
Q psy12614 101 LNIKSSTAVTSGTCWCLSVHKKKRLLAAGT-EQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGC----- 174 (708)
Q Consensus 101 ~~~~~~~~~~~~~v~~~~~s~~~~~la~~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~----- 174 (708)
++.+..+..|...+.+++|+|+++++++++ .++.|++||+.+++.. ..+.. ...+.+++|+|++++|++++
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~--~~~~~-~~~~~~~~~~~~g~~l~~~~~~~~~ 277 (433)
T 3bws_A 201 LAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEI--RKTDK-IGLPRGLLLSKDGKELYIAQFSASN 277 (433)
T ss_dssp CCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEE--EECCC-CSEEEEEEECTTSSEEEEEEEESCT
T ss_pred ceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEE--EEecC-CCCceEEEEcCCCCEEEEEECCCCc
Confidence 999999999999999999999999886554 7999999999998876 44544 44599999999999999888
Q ss_pred ---CC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCC-E-EEEEcCCCcEEEEeCCCCeeEEEeeccccCeE
Q psy12614 175 ---AA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADF-T-IITGDSGGFVRFWDGKTGVQWSDVKTHKKDIL 248 (708)
Q Consensus 175 ---~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~-l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~ 248 (708)
.| .|++||+.+++.+..+.. ...+.+++|+|++ . +++++.++.|++||+.+++.+..+. +...+.
T Consensus 278 ~~~~dg~i~~~d~~~~~~~~~~~~--------~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~-~~~~~~ 348 (433)
T 3bws_A 278 QESGGGRLGIYSMDKEKLIDTIGP--------PGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIP-VFDKPN 348 (433)
T ss_dssp TCSCCEEEEEEETTTTEEEEEEEE--------EECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEE-CSSSEE
T ss_pred cccCCCeEEEEECCCCcEEeeccC--------CCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEec-CCCCCC
Confidence 47 999999999988776633 4578899999999 4 5677899999999999998888776 678899
Q ss_pred EEEEeCCCCEEEEEec---------------CCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--
Q psy12614 249 ALTVSEDENYLYCAGV---------------DPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH-- 311 (708)
Q Consensus 249 ~~~~s~~~~~l~~~~~---------------dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~-- 311 (708)
+++|+|++++|++++. ||.|++||..+ ++ ....+.. ...+.+++|+
T Consensus 349 ~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~--------~~--------~~~~~~~-~~~~~~~~~s~d 411 (433)
T 3bws_A 349 TIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTT--------DT--------VKEFWEA-GNQPTGLDVSPD 411 (433)
T ss_dssp EEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTT--------TE--------EEEEEEC-SSSEEEEEECTT
T ss_pred eEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCC--------Cc--------EEEEecC-CCCCceEEEcCC
Confidence 9999999999998876 57999999988 64 3444444 5678999998
Q ss_pred CCEEEEEcC-CCeEEEEeCCC
Q psy12614 312 GNRLYSGGL-DSYLSLSYYPP 331 (708)
Q Consensus 312 ~~~l~s~~~-d~~i~iw~~~~ 331 (708)
+++|++++. |+.|++|++++
T Consensus 412 g~~l~~~~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 412 NRYLVISDFLDHQIRVYRRDG 432 (433)
T ss_dssp SCEEEEEETTTTEEEEEEETT
T ss_pred CCEEEEEECCCCeEEEEEecC
Confidence 778887764 99999999863
|
| >3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1e-28 Score=247.47 Aligned_cols=308 Identities=10% Similarity=0.030 Sum_probs=215.0
Q ss_pred EEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEE-E
Q psy12614 52 IWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLA-A 128 (708)
Q Consensus 52 iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la-~ 128 (708)
||++.+...+. .+.+|. ..|.+++|+ +++|++|+.++ +++||+++++....... ..+..+++.++++.++ +
T Consensus 3 i~s~~~~~~~~-~~~~h~--~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 76 (355)
T 3vu4_A 3 LGSMITRNPIV-PENHVS--NPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIMSQEM--RHLSKVRMLHRTNYVAFV 76 (355)
T ss_dssp -----------------C--CCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEEEEEC--SCCCEEEECTTSSEEEEE
T ss_pred cccccccCCcc-ccccCC--CceEEEEECCCCCEEEEEcCCE-EEEEecCCcceeeeeec--CCeEEEEEcCCCCEEEEE
Confidence 56666666554 678898 999999999 88888888765 78999998877655443 3588889999988885 5
Q ss_pred EeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCCeEEEEEcCCC-ceEEEEEecccCCCCCceeEE
Q psy12614 129 GTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAAAVRVWDIHKG-HAIHKMSLDKSSKFSKNTAVW 207 (708)
Q Consensus 129 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~v~ 207 (708)
++.|+.|++||..+++.+ ..+. +...|.+++|+++. ++++..+.|++||+.++ +.+..+.. ...
T Consensus 77 ~~~d~~v~iWd~~~~~~~--~~~~-~~~~v~~v~~~~~~--~~~~~~~~i~i~d~~~~~~~~~~~~~----------~~~ 141 (355)
T 3vu4_A 77 TGVKEVVHIWDDVKKQDV--SRIK-VDAPVKDLFLSREF--IVVSYGDVISVFKFGNPWKRITDDIR----------FGG 141 (355)
T ss_dssp CSSTTEEEEEETTTTEEE--EEEE-CSSCEEEEEECSSE--EEEEETTEEEEEESSTTCCBSSCCEE----------EEE
T ss_pred ECCccEEEEEECCCCcEE--EEEE-CCCceEEEEEcCCE--EEEEEcCEEEEEECCCCceeeEEecc----------CCc
Confidence 677899999999999887 3443 56789999999764 55555459999999988 55544431 334
Q ss_pred EEEEccCCEEEE--EcCCCcEEEEeCCCCe----------------eEEEeeccccCeEEEEEeCCCCEEEEEecCCe-E
Q psy12614 208 CVAFCADFTIIT--GDSGGFVRFWDGKTGV----------------QWSDVKTHKKDILALTVSEDENYLYCAGVDPT-V 268 (708)
Q Consensus 208 ~~~~~~~~~l~~--~~~dg~i~~wd~~~~~----------------~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~-i 268 (708)
.+++++ ..+++ |+.+|.|++||+.+++ .+..+.+|...|.+++|+|++++|++++.|++ |
T Consensus 142 ~~~~s~-~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v 220 (355)
T 3vu4_A 142 VCEFSN-GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTII 220 (355)
T ss_dssp EEEEET-TEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEE
T ss_pred eEEEEc-cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEE
Confidence 456666 54554 6889999999998865 26788899999999999999999999999998 9
Q ss_pred EEEEccCCcccccCCCCCCCCcceEEeEEEe-c-cccceEEEEEe--CCEEEEEcCCCeEEEEeCCCCceeecCccCCCC
Q psy12614 269 VCFQRTRKPQVCSTSGPEQGSSVWVRSVNRV-I-HEGDVKSLALH--GNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQS 344 (708)
Q Consensus 269 ~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~-~~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~ 344 (708)
++||+.+ ++ ....+. + |...|.+++|+ +.+|++++.|+.|++||+......... .....
T Consensus 221 ~iwd~~~--------~~--------~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~-~~~~~ 283 (355)
T 3vu4_A 221 RVFKTED--------GV--------LVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRH-ALKGW 283 (355)
T ss_dssp EEEETTT--------CC--------EEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSE-ETTTT
T ss_pred EEEECCC--------Cc--------EEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccc-cccce
Confidence 9999998 76 666776 5 99999999999 899999999999999999765321111 00000
Q ss_pred ceEEEEcCCcEEEEEcCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEEEc-C
Q psy12614 345 TPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYST-E 423 (708)
Q Consensus 345 ~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~-d 423 (708)
+.|. ..+ ..|. .....+..........++|++||++++++. |
T Consensus 284 ----~~~~------~~~---~~~~------------------------~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~~d 326 (355)
T 3vu4_A 284 ----INMK------YFQ---SEWS------------------------LCNFKLSVDKHVRGCKIAWISESSLVVVWPHT 326 (355)
T ss_dssp ----EECC------CCC---CSSC------------------------SEEEECCCCTTCCCCEEEESSSSEEEEEETTT
T ss_pred ----eecc------ccc---cccc------------------------eeEEEeccCCCCCceEEEEeCCCCEEEEEeCC
Confidence 0000 000 0000 011111112233346689999999999965 9
Q ss_pred CceEEEEEEecC
Q psy12614 424 SCVRLHSLDLDG 435 (708)
Q Consensus 424 ~~i~i~~~~~~~ 435 (708)
|.+++|++..++
T Consensus 327 g~~~~~~~~~~~ 338 (355)
T 3vu4_A 327 RMIETFKVVFDD 338 (355)
T ss_dssp TEEEEEEEEEET
T ss_pred CeEEEEEEEcCC
Confidence 999999998744
|
| >3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.97 E-value=5.7e-30 Score=255.96 Aligned_cols=264 Identities=8% Similarity=0.040 Sum_probs=205.4
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEeCCEEEEEcCCCcEEEEECC---------CC
Q psy12614 31 CIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWFNDRLFSGGLQGFVNEYDMR---------RL 101 (708)
Q Consensus 31 ~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~~~~l~s~~~d~~i~vwd~~---------~~ 101 (708)
...+.+++++||+|+.||.|++||+.+++.+. .+. . ..|.++.|+.. +++++.|++|++|+.. ++
T Consensus 41 ~~~~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~-~~~--~--~~v~~~~~~~~-~~s~s~D~~i~~w~~~~~~~~~~~~~~ 114 (343)
T 3lrv_A 41 NKSMYYDKWVCMCRCEDGALHFTQLKDSKTIT-TIT--T--PNPRTGGEHPA-IISRGPCNRLLLLYPGNQITILDSKTN 114 (343)
T ss_dssp CSSSSEEEEEEEEEEETTEEEEEEESSSSCEE-EEE--E--ECCCTTCCCCS-EEEECSTTEEEEEETTTEEEEEETTTC
T ss_pred hhhhcCCCCEEEEECCCCcEEEEECCCCcEEE-EEe--c--CCceeeeeCCc-eEEecCCCeEEEEEccCceEEeecCCc
Confidence 34455788999999999999999999998876 444 3 56777778744 9999999999999665 55
Q ss_pred eEeEEEe-ecCCceEEEEEec--CCCEEEEEeCCCcEEEEEccCCcEEEEEec-ccccccEEEEEECCCCCEEEEecCC-
Q psy12614 102 NIKSSTA-VTSGTCWCLSVHK--KKRLLAAGTEQGHINLFQISDEGLLYEKLL-DRQQGRILCTAWHSSGDYLVTGCAA- 176 (708)
Q Consensus 102 ~~~~~~~-~~~~~v~~~~~s~--~~~~la~~~~d~~i~iwd~~~~~~~~~~~~-~~~~~~v~~~~~s~d~~~l~~~~~d- 176 (708)
+.+..+. .|.+.|.+++|+| +++++++++.||.|++||+++++.. ... ..+...+.+++|+|++.+|++|+.|
T Consensus 115 ~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~--~~~~~~~~~~i~~~~~~pdg~~lasg~~dg 192 (343)
T 3lrv_A 115 KVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQY--IVHSAKSDVEYSSGVLHKDSLLLALYSPDG 192 (343)
T ss_dssp CEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEE--EEECCCSSCCCCEEEECTTSCEEEEECTTS
T ss_pred ceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEE--EEEecCCCCceEEEEECCCCCEEEEEcCCC
Confidence 5455544 6778999999999 9999999999999999999998885 333 3456689999999999999999999
Q ss_pred eEEEEEcCCCceE-EEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCeeEEEeec---cccCeE--E
Q psy12614 177 AVRVWDIHKGHAI-HKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDVKT---HKKDIL--A 249 (708)
Q Consensus 177 ~i~iwd~~~~~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~~~---~~~~i~--~ 249 (708)
.|++||+++++.+ ..+.. .|...|.+++|+|++. +++++ ++.|++||+++++.+..+.. |...+. +
T Consensus 193 ~i~iwd~~~~~~~~~~~~~------~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 265 (343)
T 3lrv_A 193 ILDVYNLSSPDQASSRFPV------DEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVT 265 (343)
T ss_dssp CEEEEESSCTTSCCEECCC------CTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEE
T ss_pred EEEEEECCCCCCCccEEec------cCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeecccccccccccceE
Confidence 9999999999887 55543 1488999999999996 77777 56999999998877655443 334443 6
Q ss_pred EEEeCCCCEEEEEec-CCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe-----CCEEEEEcCCCe
Q psy12614 250 LTVSEDENYLYCAGV-DPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH-----GNRLYSGGLDSY 323 (708)
Q Consensus 250 ~~~s~~~~~l~~~~~-dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~-----~~~l~s~~~d~~ 323 (708)
++|+|++++|++++. |+.+++|++.. +. ..|.. .++..++|. ...+++++.|+.
T Consensus 266 ~~~~~~g~~l~~~s~~d~~i~v~~~~~--------~~----~~~~~--------~~~~~~~~~~~~~~~~~l~~~~~d~~ 325 (343)
T 3lrv_A 266 YDIDDSGKNMIAYSNESNSLTIYKFDK--------KT----KNWTK--------DEESALCLQSDTADFTDMDVVCGDGG 325 (343)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEEECT--------TT----CSEEE--------EEEEECCC----CCCCEEEEEEETTE
T ss_pred EEECCCCCEEEEecCCCCcEEEEEEcc--------cc----cceEe--------cCceeEecCccccccceeEEEecCCc
Confidence 999999999999998 99999999977 32 23432 334444444 356778888888
Q ss_pred EEEEeC
Q psy12614 324 LSLSYY 329 (708)
Q Consensus 324 i~iw~~ 329 (708)
+.++-.
T Consensus 326 ~~~~~~ 331 (343)
T 3lrv_A 326 IAAILK 331 (343)
T ss_dssp EEEEEE
T ss_pred eEEEEe
Confidence 877644
|
| >2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B | Back alignment and structure |
|---|
Probab=99.97 E-value=2.1e-29 Score=260.07 Aligned_cols=257 Identities=14% Similarity=0.186 Sum_probs=214.0
Q ss_pred eEEEEEecCCCCCcEEEEEEe---CCEEEEEcCCCcEEEEECCC----------CeEeEEEeecCCceEEEEEecCCC-E
Q psy12614 60 HVDRVFIGDPLSNSIECLTWF---NDRLFSGGLQGFVNEYDMRR----------LNIKSSTAVTSGTCWCLSVHKKKR-L 125 (708)
Q Consensus 60 ~~~~~~~~h~~~~~v~~l~~~---~~~l~s~~~d~~i~vwd~~~----------~~~~~~~~~~~~~v~~~~~s~~~~-~ 125 (708)
.......+|. +.|++++|+ +.+|++++.||.|++||+.+ .+++..+.+|...|.+++|+|++. +
T Consensus 119 ~~~~~~~~h~--~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~ 196 (430)
T 2xyi_A 119 IEIEIKINHE--GEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGY 196 (430)
T ss_dssp EEEEEEEEES--SCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTE
T ss_pred eEEEEEEcCC--CcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCe
Confidence 3334667888 999999999 46899999999999999987 678888999999999999999998 9
Q ss_pred EEEEeCCCcEEEEEccCCcE-----EEEEecccccccEEEEEECC-CCCEEEEecCC-eEEEEEcCCC---ceEEEEEec
Q psy12614 126 LAAGTEQGHINLFQISDEGL-----LYEKLLDRQQGRILCTAWHS-SGDYLVTGCAA-AVRVWDIHKG---HAIHKMSLD 195 (708)
Q Consensus 126 la~~~~d~~i~iwd~~~~~~-----~~~~~~~~~~~~v~~~~~s~-d~~~l~~~~~d-~i~iwd~~~~---~~~~~~~~~ 195 (708)
|++|+.||.|++||+..+.. .....+.+|...|.+++|+| ++.+|++++.+ .|++||++++ +.+..+.
T Consensus 197 l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~-- 274 (430)
T 2xyi_A 197 LLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVD-- 274 (430)
T ss_dssp EEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEE--
T ss_pred EEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEee--
Confidence 99999999999999987321 11245668999999999999 67899999999 9999999987 4555554
Q ss_pred ccCCCCCceeEEEEEEccCCE--EEEEcCCCcEEEEeCCC-CeeEEEeeccccCeEEEEEeCCCC-EEEEEecCCeEEEE
Q psy12614 196 KSSKFSKNTAVWCVAFCADFT--IITGDSGGFVRFWDGKT-GVQWSDVKTHKKDILALTVSEDEN-YLYCAGVDPTVVCF 271 (708)
Q Consensus 196 ~~~~~~~~~~v~~~~~~~~~~--l~~~~~dg~i~~wd~~~-~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~~dg~i~iw 271 (708)
.+...|.+++|+|++. +++|+.||.|++||+++ +..+..+..|...|.+++|+|+++ +|++++.|+.|++|
T Consensus 275 -----~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iw 349 (430)
T 2xyi_A 275 -----AHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVW 349 (430)
T ss_dssp -----CCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEE
T ss_pred -----cCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEE
Confidence 2378899999999884 78999999999999998 567888889999999999999985 68999999999999
Q ss_pred EccCCcccccCCCCCCCC------cceEEeEEEeccccceEEEEEe--CC-EEEEEcCCCeEEEEeCCCCc
Q psy12614 272 QRTRKPQVCSTSGPEQGS------SVWVRSVNRVIHEGDVKSLALH--GN-RLYSGGLDSYLSLSYYPPKT 333 (708)
Q Consensus 272 ~~~~~~~~~~~~g~~~~~------~~~~~~~~~~~~~~~v~~l~~~--~~-~l~s~~~d~~i~iw~~~~~~ 333 (708)
|+.. ...... ..........+|...|.+++|+ +. ++++++.|+.|++|++....
T Consensus 350 d~~~--------~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~~ 412 (430)
T 2xyi_A 350 DLSK--------IGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAENV 412 (430)
T ss_dssp EGGG--------TTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECHHH
T ss_pred eCCC--------CccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEccccc
Confidence 9986 210000 0011456677899999999999 55 89999999999999997654
|
| >3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans} | Back alignment and structure |
|---|
Probab=99.97 E-value=4.9e-28 Score=251.08 Aligned_cols=316 Identities=9% Similarity=0.044 Sum_probs=245.4
Q ss_pred CCCcEEEEE---EcCCCCEEEEEe--------------CCC--cEEEEeCCCCCe-EEEEEecCCCCCcEEEEEEe--CC
Q psy12614 25 EPKVINCIA---CEPKSSRLAVSR--------------ADQ--SIEIWDISETPH-VDRVFIGDPLSNSIECLTWF--ND 82 (708)
Q Consensus 25 h~~~v~~~~---~s~~~~~la~~~--------------~dg--~v~iwd~~~~~~-~~~~~~~h~~~~~v~~l~~~--~~ 82 (708)
....+..++ |+|+++.+++.+ .++ .|.+||..++.. ....+..+ ..+.+++|+ +.
T Consensus 59 ~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~---~~~~~~~~s~~~~ 135 (433)
T 3bws_A 59 KNIALVEMAIPVYKDEKEIELKLSSPGFQNSSYRIRKPEELNEKLIALDKEGITHRFISRFKTG---FQPKSVRFIDNTR 135 (433)
T ss_dssp TTEEEEEEEEECCCTTCCEEEEEECTTBCCEEEEESSGGGGTTCEEECCBTTCSEEEEEEEECS---SCBCCCEESSSSE
T ss_pred cCCccEEEEEeeccCCCcEEEEEEccccCcceeeecccCCCceEEEEECCCCCcceEEEEEcCC---CCceEEEEeCCCe
Confidence 456678888 899887766542 223 344444443422 22245444 456689999 55
Q ss_pred EEEEEcCCCcEEEEECCCCeEeE-----EEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEeccccccc
Q psy12614 83 RLFSGGLQGFVNEYDMRRLNIKS-----STAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGR 157 (708)
Q Consensus 83 ~l~s~~~d~~i~vwd~~~~~~~~-----~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~ 157 (708)
.+++++.++.|++||+.+++... .+.+|.+.|.+++|+|+++++++++.|+.|++||+.+++.. ..+..|...
T Consensus 136 ~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~--~~~~~~~~~ 213 (433)
T 3bws_A 136 LAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYK--ATVDLTGKW 213 (433)
T ss_dssp EEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEE--EEEECSSSS
T ss_pred EEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEE--EEEcCCCCC
Confidence 66677788999999999998877 34478889999999999999999999999999999998877 566678889
Q ss_pred EEEEEECCCCCEEEEe-cCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEc--------CCCcE
Q psy12614 158 ILCTAWHSSGDYLVTG-CAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGD--------SGGFV 226 (708)
Q Consensus 158 v~~~~~s~d~~~l~~~-~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~--------~dg~i 226 (708)
+.+++|+|++++++++ +.+ .|++||+.+++.+..+.. ...+.+++|+|+++ +++++ .||.|
T Consensus 214 ~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~--------~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i 285 (433)
T 3bws_A 214 SKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDK--------IGLPRGLLLSKDGKELYIAQFSASNQESGGGRL 285 (433)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCC--------CSEEEEEEECTTSSEEEEEEEESCTTCSCCEEE
T ss_pred eeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecC--------CCCceEEEEcCCCCEEEEEECCCCccccCCCeE
Confidence 9999999999988554 467 999999999988776643 45589999999995 66666 58899
Q ss_pred EEEeCCCCeeEEEeeccccCeEEEEEeCCCCEE-EEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccce
Q psy12614 227 RFWDGKTGVQWSDVKTHKKDILALTVSEDENYL-YCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDV 305 (708)
Q Consensus 227 ~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l-~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v 305 (708)
++||+.+++.+..+. +...+.+++|+|+++.+ ++++.++.|++||+.+ ++ ....+ .+...+
T Consensus 286 ~~~d~~~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~--------~~--------~~~~~-~~~~~~ 347 (433)
T 3bws_A 286 GIYSMDKEKLIDTIG-PPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKE--------KK--------VQKSI-PVFDKP 347 (433)
T ss_dssp EEEETTTTEEEEEEE-EEECEEEEEECSSTTEEEEEETTTTEEEEEETTT--------TE--------EEEEE-ECSSSE
T ss_pred EEEECCCCcEEeecc-CCCCcceEEECCCCCEEEEEecCCCEEEEEECCC--------Cc--------EEEEe-cCCCCC
Confidence 999999998877664 56789999999999765 5568899999999988 54 33333 467789
Q ss_pred EEEEEe--CCEEEEEcC---------------CCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEEE--cCCeEEE
Q psy12614 306 KSLALH--GNRLYSGGL---------------DSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQ--YTSHLEL 366 (708)
Q Consensus 306 ~~l~~~--~~~l~s~~~---------------d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~--~~~~i~i 366 (708)
.+++|+ ++.+++++. ||.|++||+.+............+..++++|+|++++++ .++.|.+
T Consensus 348 ~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~d~~i~v 427 (433)
T 3bws_A 348 NTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEAGNQPTGLDVSPDNRYLVISDFLDHQIRV 427 (433)
T ss_dssp EEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEECSSSEEEEEECTTSCEEEEEETTTTEEEE
T ss_pred CeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecCCCCCceEEEcCCCCEEEEEECCCCeEEE
Confidence 999999 777887776 579999999887744443234456789999999998864 4899999
Q ss_pred EEecC
Q psy12614 367 WSLGS 371 (708)
Q Consensus 367 ~~~~~ 371 (708)
|++..
T Consensus 428 ~~~~~ 432 (433)
T 3bws_A 428 YRRDG 432 (433)
T ss_dssp EEETT
T ss_pred EEecC
Confidence 99863
|
| >2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.5e-28 Score=253.83 Aligned_cols=304 Identities=11% Similarity=0.079 Sum_probs=219.0
Q ss_pred CcEEEEEEe--CCEEEEEcCCCcEEEEECCCCe---EeEEEee-------------------------------------
Q psy12614 72 NSIECLTWF--NDRLFSGGLQGFVNEYDMRRLN---IKSSTAV------------------------------------- 109 (708)
Q Consensus 72 ~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~~---~~~~~~~------------------------------------- 109 (708)
.++.+++|+ |++| +++.++.|++||+.+++ .+..+..
T Consensus 5 ~p~~~v~~s~dg~~l-~~~~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (450)
T 2vdu_B 5 HPLQNLLTSRDGSLV-FAIIKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGDS 83 (450)
T ss_dssp CCCCEEEECSSSSEE-EEEETTEEEEEEEETTTEEEEEEEEECCC-----------------------------------
T ss_pred ccEEEEEecCCCCEE-EEEeCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCcc
Confidence 578899999 6644 45568899999999998 6555543
Q ss_pred -----------------cCCceEEEEEecCCCEE-EEEeCCCcEEEEEcc--CCcEEEEEecccccccEEEEEECCCCCE
Q psy12614 110 -----------------TSGTCWCLSVHKKKRLL-AAGTEQGHINLFQIS--DEGLLYEKLLDRQQGRILCTAWHSSGDY 169 (708)
Q Consensus 110 -----------------~~~~v~~~~~s~~~~~l-a~~~~d~~i~iwd~~--~~~~~~~~~~~~~~~~v~~~~~s~d~~~ 169 (708)
|.+.|++++|+|++++| ++++.||.|++||+. +++.........|...|.+++|+|++++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~ 163 (450)
T 2vdu_B 84 IKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTT 163 (450)
T ss_dssp ----------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSE
T ss_pred ccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCE
Confidence 33369999999999996 888899999999999 7776632222356789999999999999
Q ss_pred EEEecCC-eEEEEEcCCCceEE----EEEecccCCCCCceeEEEEEEccC---CE-EEEEcCCCcEEEEeCCCCeeEEE-
Q psy12614 170 LVTGCAA-AVRVWDIHKGHAIH----KMSLDKSSKFSKNTAVWCVAFCAD---FT-IITGDSGGFVRFWDGKTGVQWSD- 239 (708)
Q Consensus 170 l~~~~~d-~i~iwd~~~~~~~~----~~~~~~~~~~~~~~~v~~~~~~~~---~~-l~~~~~dg~i~~wd~~~~~~~~~- 239 (708)
|++++.+ .|++|++.+++... .+. +|...|.+++|+|+ ++ +++++.|+.|++||+.+++.+..
T Consensus 164 l~~~~~~g~v~~~~~~~~~~~~~~~~~~~-------~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~ 236 (450)
T 2vdu_B 164 VIIADKFGDVYSIDINSIPEEKFTQEPIL-------GHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKW 236 (450)
T ss_dssp EEEEETTSEEEEEETTSCCCSSCCCCCSE-------ECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEE
T ss_pred EEEEeCCCcEEEEecCCcccccccceeee-------cccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeee
Confidence 9999999 99999998876543 222 33788999999999 85 89999999999999999988877
Q ss_pred eeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe----CCEE
Q psy12614 240 VKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH----GNRL 315 (708)
Q Consensus 240 ~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~----~~~l 315 (708)
+.+|...|.+++|+ ++++|++++.|+.|++||+.+ ++ ....+..+. .+..+.+. ...+
T Consensus 237 ~~~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~--------~~--------~~~~~~~~~-~~~~~~~~~~~~~~~~ 298 (450)
T 2vdu_B 237 LFGHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKT--------GK--------NLSTFDYNS-LIKPYLNDQHLAPPRF 298 (450)
T ss_dssp CCCCSSCEEEEEEC-STTEEEEEESSSEEEEEETTT--------CC--------EEEEEECHH-HHGGGCCTTSBC----
T ss_pred ecCCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCC--------Cc--------Eeeeecchh-hhhhhhhhcccccccc
Confidence 66899999999999 999999999999999999998 65 334443221 11111110 0000
Q ss_pred EEEcCCCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEEE--cCCeEEEEEe--cCCCCCCCCCCCCCCcccCCCC
Q psy12614 316 YSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQ--YTSHLELWSL--GSAQSTDLSSHSNTTGVPLLSF 391 (708)
Q Consensus 316 ~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~--~~~~i~i~~~--~~~~~~~~~~~~~~~~~~~~~~ 391 (708)
... +. .........++++|++++++++ .++.|.+|++ ..+.
T Consensus 299 ~~~--~~---------------~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~~~------------------ 343 (450)
T 2vdu_B 299 QNE--NN---------------DIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEMSEKQKG------------------ 343 (450)
T ss_dssp -----------------------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEECSSSTT------------------
T ss_pred ccc--cc---------------ccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEeccCCCC------------------
Confidence 000 00 0012234567778888877764 5778888888 3321
Q ss_pred ceEEEEEEecCCCceEEEEeCCCCcEEEEEc-------CCceEEEEEEecCCc
Q psy12614 392 PRLIVKMSAVNNATIRCSVVSNDGKYVAYST-------ESCVRLHSLDLDGDK 437 (708)
Q Consensus 392 ~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~-------d~~i~i~~~~~~~~~ 437 (708)
..........+ ..|.+++|+|++.+++++. +..|.+|.+....+.
T Consensus 344 ~l~~~~~~~~~-~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~~~~~~ 395 (450)
T 2vdu_B 344 DLALKQIITFP-YNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEYNLNENS 395 (450)
T ss_dssp CEEEEEEEECS-SCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEEETTTTE
T ss_pred ceeeccEeccC-CceEEEEecCCcEEEEEecccCCCCCCcceEEEEEEcCCCe
Confidence 11333333344 8899999999654444433 445899999864443
|
| >1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3 | Back alignment and structure |
|---|
Probab=99.97 E-value=2.3e-27 Score=242.42 Aligned_cols=261 Identities=10% Similarity=0.089 Sum_probs=212.2
Q ss_pred EEEEEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEE-EEEeCCCcEEEEEccCCcEEEEEecccccccEEEE
Q psy12614 83 RLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLL-AAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCT 161 (708)
Q Consensus 83 ~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l-a~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~ 161 (708)
.+++++.|+.|++||+.+++.+..+..|. .+.+++|+|++++| ++++.|+.|++||+.+++.. ..+..+. .+.++
T Consensus 4 l~vs~~~d~~v~v~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~--~~~~~~~-~v~~~ 79 (391)
T 1l0q_A 4 AYIANSESDNISVIDVTSNKVTATIPVGS-NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVI--ATVPAGS-SPQGV 79 (391)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEE--EEEECSS-SEEEE
T ss_pred EEEEcCCCCEEEEEECCCCeEEEEeecCC-CcceEEECCCCCEEEEECCCCCeEEEEECCCCeEE--EEEECCC-Cccce
Confidence 57788999999999999999999888775 58999999999987 56668999999999999886 4444443 89999
Q ss_pred EECCCCCEEEEe-cCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-E-EEEcCCCcEEEEeCCCCeeE
Q psy12614 162 AWHSSGDYLVTG-CAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-I-ITGDSGGFVRFWDGKTGVQW 237 (708)
Q Consensus 162 ~~s~d~~~l~~~-~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l-~~~~~dg~i~~wd~~~~~~~ 237 (708)
+|+|++++|+++ +.+ .|++||+.+++.+..+.. ...+.+++|+|+++ + ++++.++.|++||+.+++.+
T Consensus 80 ~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~--------~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~ 151 (391)
T 1l0q_A 80 AVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKT--------GKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVI 151 (391)
T ss_dssp EECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC--------SSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEE
T ss_pred EECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeC--------CCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEE
Confidence 999999988654 456 999999999988877753 34679999999995 5 68888999999999999998
Q ss_pred EEeeccccCeEEEEEeCCCCEE-EEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCE
Q psy12614 238 SDVKTHKKDILALTVSEDENYL-YCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNR 314 (708)
Q Consensus 238 ~~~~~~~~~i~~~~~s~~~~~l-~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~ 314 (708)
..+..+ ..+.+++|+|++++| ++++.++.|++||+.+ ++ ... ...+...+.+++|+ ++.
T Consensus 152 ~~~~~~-~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~--------~~--------~~~-~~~~~~~~~~~~~~~~g~~ 213 (391)
T 1l0q_A 152 NTVSVG-RSPKGIAVTPDGTKVYVANFDSMSISVIDTVT--------NS--------VID-TVKVEAAPSGIAVNPEGTK 213 (391)
T ss_dssp EEEECC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTT--------TE--------EEE-EEECSSEEEEEEECTTSSE
T ss_pred EEEecC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCC--------Ce--------EEE-EEecCCCccceEECCCCCE
Confidence 888755 567999999999988 5677889999999988 53 223 33456678999998 778
Q ss_pred EEEEc---CCCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEE-EE-cCCeEEEEEecCCC
Q psy12614 315 LYSGG---LDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVL-LQ-YTSHLELWSLGSAQ 373 (708)
Q Consensus 315 l~s~~---~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~-~~-~~~~i~i~~~~~~~ 373 (708)
+++++ .++.|++||+.+...............++++|+++.++ ++ .++.+++||+.+++
T Consensus 214 l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~ 277 (391)
T 1l0q_A 214 AYVTNVDKYFNTVSMIDTGTNKITARIPVGPDPAGIAVTPDGKKVYVALSFXNTVSVIDTATNT 277 (391)
T ss_dssp EEEEEECSSCCEEEEEETTTTEEEEEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTE
T ss_pred EEEEecCcCCCcEEEEECCCCeEEEEEecCCCccEEEEccCCCEEEEEcCCCCEEEEEECCCCc
Confidence 88887 68999999998876433332333456789999998774 43 68999999998765
|
| >3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.4e-29 Score=279.53 Aligned_cols=253 Identities=13% Similarity=0.181 Sum_probs=213.2
Q ss_pred EEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECC--CCeEeEEEeecCCceEEEEEecC--CCEEEEEeCCCcEE
Q psy12614 63 RVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMR--RLNIKSSTAVTSGTCWCLSVHKK--KRLLAAGTEQGHIN 136 (708)
Q Consensus 63 ~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~--~~~~~~~~~~~~~~v~~~~~s~~--~~~la~~~~d~~i~ 136 (708)
..+.+|. +.|++++|+ +++|++|+.||+|++||+. +++....+.+|.+.|++++|+|+ +++|++|+.||.|+
T Consensus 3 ~~l~gH~--~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~ 80 (753)
T 3jro_A 3 VIANAHN--ELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVL 80 (753)
T ss_dssp -----CC--CCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEE
T ss_pred eecccCc--ceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEE
Confidence 3788999 999999999 8999999999999999998 55778889999999999999998 99999999999999
Q ss_pred EEEccCCcEEEEEecccccccEEEEEECCC--CCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEcc
Q psy12614 137 LFQISDEGLLYEKLLDRQQGRILCTAWHSS--GDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCA 213 (708)
Q Consensus 137 iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d--~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 213 (708)
+||+.+++......+.+|...|.+++|+|+ ++++++++.| .|++||+.++......... .+...|.+++|+|
T Consensus 81 vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~-----~~~~~v~~l~~~p 155 (753)
T 3jro_A 81 IWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIID-----AHAIGVNSASWAP 155 (753)
T ss_dssp EEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEE-----CCSSCEEEEEECC
T ss_pred EEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEee-----cCCCceEEEEecC
Confidence 999999975555788899999999999999 9999999999 9999999887443333322 4488999999999
Q ss_pred -------------CCE-EEEEcCCCcEEEEeCCCC----eeEEEeeccccCeEEEEEeCC---CCEEEEEecCCeEEEEE
Q psy12614 214 -------------DFT-IITGDSGGFVRFWDGKTG----VQWSDVKTHKKDILALTVSED---ENYLYCAGVDPTVVCFQ 272 (708)
Q Consensus 214 -------------~~~-l~~~~~dg~i~~wd~~~~----~~~~~~~~~~~~i~~~~~s~~---~~~l~~~~~dg~i~iw~ 272 (708)
++. +++|+.||.|++||++++ .....+.+|...|.+++|+|+ +++|++++.||.|++||
T Consensus 156 ~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd 235 (753)
T 3jro_A 156 ATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWT 235 (753)
T ss_dssp CC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEE
T ss_pred cccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEec
Confidence 464 999999999999999877 566778899999999999999 89999999999999999
Q ss_pred ccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEEEcCCCeEEEEeCCCCc
Q psy12614 273 RTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSGGLDSYLSLSYYPPKT 333 (708)
Q Consensus 273 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~~~ 333 (708)
+.+ ++. ...........|...|.+++|+ +.++++++.||.|++|++....
T Consensus 236 ~~~--------~~~---~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~~~ 287 (753)
T 3jro_A 236 QDN--------EQG---PWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEG 287 (753)
T ss_dssp ESS--------SSS---CCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCSSS
T ss_pred CCC--------CCC---cceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCCCC
Confidence 988 320 0000122334578899999998 8899999999999999998543
|
| >2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.4e-28 Score=232.50 Aligned_cols=180 Identities=12% Similarity=0.060 Sum_probs=144.5
Q ss_pred CCCcEEEEEC-CCCeEeEEEeecCCceEEEEEec---CCCEEEEEeCCCcEEEEEccCCcEEEEEeccccc---ccEEEE
Q psy12614 89 LQGFVNEYDM-RRLNIKSSTAVTSGTCWCLSVHK---KKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQ---GRILCT 161 (708)
Q Consensus 89 ~d~~i~vwd~-~~~~~~~~~~~~~~~v~~~~~s~---~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~---~~v~~~ 161 (708)
.|+.|++|++ .+|+.+..+..|...+..++|+| ++.+||+++.|++|+|||+.+++.+ ..+.+|. ..+.++
T Consensus 155 ~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l--~tL~g~~~~v~~v~~v 232 (356)
T 2w18_A 155 SDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLL--KKMHIDDSYQASVCHK 232 (356)
T ss_dssp TTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEE--EEEECCC---CCCEEE
T ss_pred CCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEE--EEEcCCCcceeeeEEE
Confidence 4789999999 55888899999999999999999 7899999999999999999999987 5666543 467788
Q ss_pred EECCCCCEE------------EEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEEEEcCCCcEEE
Q psy12614 162 AWHSSGDYL------------VTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRF 228 (708)
Q Consensus 162 ~~s~d~~~l------------~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~ 228 (708)
+|+|+|+++ ++|+.| +|++||..+++.+..+.... .. ++...+.+..++ ...+++++.|++|++
T Consensus 233 afSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~-p~-Gh~~~~lsg~~s-g~~lASgS~DgTIkI 309 (356)
T 2w18_A 233 AYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCL-PP-GQAGRFLEGDVK-DHCAAAILTSGTIAI 309 (356)
T ss_dssp EEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECC-CT-TCCCCEEEEEEE-TTEEEEEETTSCEEE
T ss_pred EECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeec-cC-CCcceeEccccC-CCEEEEEcCCCcEEE
Confidence 999999886 567788 99999999999887654211 00 224444444444 225889999999999
Q ss_pred EeCCCCeeEEEeeccccCeE-EEEEeCCCCEEEEEecCCeEEEEEc
Q psy12614 229 WDGKTGVQWSDVKTHKKDIL-ALTVSEDENYLYCAGVDPTVVCFQR 273 (708)
Q Consensus 229 wd~~~~~~~~~~~~~~~~i~-~~~~s~~~~~l~~~~~dg~i~iw~~ 273 (708)
||+.+++++.++.+|...+. +++|+|||++|++|+.|++|++||+
T Consensus 310 WDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 310 WDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp EETTTCSEEEEECCC--CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred EECCCCcEEEEecCCCCCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 99999999999998887655 5899999999999999999999996
|
| >4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.3e-28 Score=250.48 Aligned_cols=259 Identities=11% Similarity=0.017 Sum_probs=175.7
Q ss_pred ecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEE---EecccccccEEEEEECC--------CCCEEEEecCC-
Q psy12614 109 VTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYE---KLLDRQQGRILCTAWHS--------SGDYLVTGCAA- 176 (708)
Q Consensus 109 ~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~---~~~~~~~~~v~~~~~s~--------d~~~l~~~~~d- 176 (708)
.|...+....+++++.+||+++.|++|++||..+++.... ..+.+|.+.|.+++|+| |+++||+++.|
T Consensus 87 ~~~~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~ 166 (393)
T 4gq1_A 87 LHDGDGNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDC 166 (393)
T ss_dssp ----------CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTS
T ss_pred ccCCCcceeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCC
Confidence 4455566667788888999999999999999998876422 34789999999999998 88999999999
Q ss_pred eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCC--EEEEEcCCCcEEEEeCCCCeeEEEe--------------
Q psy12614 177 AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADF--TIITGDSGGFVRFWDGKTGVQWSDV-------------- 240 (708)
Q Consensus 177 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~l~~~~~dg~i~~wd~~~~~~~~~~-------------- 240 (708)
+|++||+.++..+..+... ...+.+++|+|++ .+++++.||.|++||+++++.....
T Consensus 167 tv~~Wd~~~~~~~~~~~~~-------~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~ 239 (393)
T 4gq1_A 167 TLIIWRLTDEGPILAGYPL-------SSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTL 239 (393)
T ss_dssp EEEEEEEETTEEEEEEEEC-------SSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEE
T ss_pred eEEEEECCCCceeeeecCC-------CCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEec
Confidence 9999999988877766643 7789999999987 3899999999999999887643322
Q ss_pred -----------eccccCeEEEEEe-CCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEE
Q psy12614 241 -----------KTHKKDILALTVS-EDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSL 308 (708)
Q Consensus 241 -----------~~~~~~i~~~~~s-~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l 308 (708)
.+|...+.++.|+ |+++.|++++.|+.+++||+.. ++ ....+..|...+..+
T Consensus 240 ~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~--------~~--------~~~~l~~~~~~~~~~ 303 (393)
T 4gq1_A 240 NTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFA--------NN--------DYNEISDSTMKLGPK 303 (393)
T ss_dssp ESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-----------------------------------
T ss_pred ccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECcc--------CC--------CCceEeeecCccccE
Confidence 3577788899987 7999999999999999999988 54 334445555555444
Q ss_pred EEeCCEEEEEcCCCeEEEEeCCCCceeecCccCCCCceEEEEc--CCcEEEEE-cCCeEEEEEecCCCCCCCCCCCCCCc
Q psy12614 309 ALHGNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAK--DIQHVLLQ-YTSHLELWSLGSAQSTDLSSHSNTTG 385 (708)
Q Consensus 309 ~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~--~~~~l~~~-~~~~i~i~~~~~~~~~~~~~~~~~~~ 385 (708)
.+....-- .. .........++| ++.+++++ .++.|++||..++.
T Consensus 304 ~~~~~~~~--------------------~~-~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~------------ 350 (393)
T 4gq1_A 304 NLLPNVQG--------------------IS-LFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKD------------ 350 (393)
T ss_dssp CCSCSEEE--------------------EC-SSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTT------------
T ss_pred EEcccccc--------------------cc-ccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCc------------
Confidence 43311110 00 011112222332 33445554 57888999888765
Q ss_pred ccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEEEcCCceEEEEEE
Q psy12614 386 VPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYSTESCVRLHSLD 432 (708)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~d~~i~i~~~~ 432 (708)
.. .....+...|.+++|+|||++||++.++.+.+|.+.
T Consensus 351 --------~~-~~~~~~~~~V~svafspdG~~LA~as~~Gv~lvrL~ 388 (393)
T 4gq1_A 351 --------SN-SIPIQLGMPIVDFCWHQDGSHLAIATEGSVLLTRLM 388 (393)
T ss_dssp --------CC-EEEEECSSCEEEEEECTTSSEEEEEESSEEEEEEEG
T ss_pred --------EE-EEecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEEe
Confidence 22 233467789999999999999999888888888875
|
| >4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A | Back alignment and structure |
|---|
Probab=99.96 E-value=5.6e-29 Score=253.18 Aligned_cols=241 Identities=12% Similarity=0.040 Sum_probs=178.2
Q ss_pred CCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEE----EEecCCCCCcEEEEEEe----------CCEEEEEcCC
Q psy12614 25 EPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDR----VFIGDPLSNSIECLTWF----------NDRLFSGGLQ 90 (708)
Q Consensus 25 h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~----~~~~h~~~~~v~~l~~~----------~~~l~s~~~d 90 (708)
|...+....+++++++||+|+.|++|+|||..++..... .+.||. +.|.+++|+ +++||+++.|
T Consensus 88 ~~~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~--~~v~~v~~~p~~~~~~~~d~~~las~s~D 165 (393)
T 4gq1_A 88 HDGDGNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHH--NFVNDIDIADVYSADNRLAEQVIASVGDD 165 (393)
T ss_dssp ---------CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCS--SCEEEEEEEEEECTTCSEEEEEEEEEETT
T ss_pred cCCCcceeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCC--CceEEEEEccccccccCCCCCEEEEEECC
Confidence 334444455556777899999999999999998765432 367899 999999996 5699999999
Q ss_pred CcEEEEECCCCeEeEEEeecCCceEEEEEecCCC-EEEEEeCCCcEEEEEccCCcEEEE---------------------
Q psy12614 91 GFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKR-LLAAGTEQGHINLFQISDEGLLYE--------------------- 148 (708)
Q Consensus 91 ~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~-~la~~~~d~~i~iwd~~~~~~~~~--------------------- 148 (708)
++|++||+.++.++..+..|...|.+++|+|++. +|++++.|++|++||+.+++....
T Consensus 166 ~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~ 245 (393)
T 4gq1_A 166 CTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLV 245 (393)
T ss_dssp SEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC
T ss_pred CeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccce
Confidence 9999999999999999999999999999999875 799999999999999987754311
Q ss_pred --EecccccccEEEEEEC-CCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEE----------------
Q psy12614 149 --KLLDRQQGRILCTAWH-SSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWC---------------- 208 (708)
Q Consensus 149 --~~~~~~~~~v~~~~~s-~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~---------------- 208 (708)
....+|...+.++.|+ ||++.|++++.| .+++||+..++....+... ...+..
T Consensus 246 ~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~-------~~~~~~~~~~~~~~~~~~~~~~ 318 (393)
T 4gq1_A 246 NTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDS-------TMKLGPKNLLPNVQGISLFPSL 318 (393)
T ss_dssp ------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC--------------------------CCSCSEEEECSSCCS
T ss_pred eeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeee-------cCccccEEEccccccccccCcc
Confidence 1123567788899986 899999999999 9999999887766555432 222222
Q ss_pred --EEEcc--CCE-EEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccC
Q psy12614 209 --VAFCA--DFT-IITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTR 275 (708)
Q Consensus 209 --~~~~~--~~~-l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~ 275 (708)
..|.| ++. +++|+.||.|++||..+++....+..|...|.+++|+|||++||+++.+| +.+|.+..
T Consensus 319 ~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~~~~~V~svafspdG~~LA~as~~G-v~lvrL~g 389 (393)
T 4gq1_A 319 LGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIATEGS-VLLTRLMG 389 (393)
T ss_dssp SCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEEEEECSSCEEEEEECTTSSEEEEEESSE-EEEEEEGG
T ss_pred eeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEEecCCCCcEEEEEEcCCCCEEEEEeCCC-eEEEEEeC
Confidence 23333 334 56788899999999999998888888999999999999999999998665 66666543
|
| >2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A | Back alignment and structure |
|---|
Probab=99.96 E-value=3.3e-27 Score=223.24 Aligned_cols=270 Identities=10% Similarity=0.061 Sum_probs=185.7
Q ss_pred EEEEEEcCCCC---EEEEEeCCCcEEEEeCCCC---CeEEEEEecCCCCCcEEEEEEe---CCEEEEEcCCC---cEEEE
Q psy12614 29 INCIACEPKSS---RLAVSRADQSIEIWDISET---PHVDRVFIGDPLSNSIECLTWF---NDRLFSGGLQG---FVNEY 96 (708)
Q Consensus 29 v~~~~~s~~~~---~la~~~~dg~v~iwd~~~~---~~~~~~~~~h~~~~~v~~l~~~---~~~l~s~~~d~---~i~vw 96 (708)
+.++-|-..|- .++++++. .|++|+..++ +.+ .++.+|. .+|..+++. .+.+.++-..= .|+.-
T Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~-~v~lw~~~~~~~~~~~-~~~~~~~--~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sl 117 (356)
T 2w18_A 42 VSAMFWERAGCKEPCIITACED-VVSLWKALDAWQWEKL-YTWHFAE--VPVLQIVPVPDVYNLVCVALGNLEIREIRAL 117 (356)
T ss_dssp EEEEEEC----CEEEEEEEESS-EEEEEEESSSSBEEEE-EEEECCS--SCEEEECCCTTCCSCEEEEECSSSEEEEEEE
T ss_pred EeeeeeccCCCCccEEEEeccc-eEEEcccCCCccceee-EEEeccC--ceeEEEEEcCcccceeeeeeccccccceEEE
Confidence 44555544332 57778865 9999999998 444 4999999 999999998 23332221111 11111
Q ss_pred ECCCC----eEeEEEeecCCceEEEEEecCCCEEEEEe--CCCcEEEEEcc-CCcEEEEEecccccccEEEEEECC---C
Q psy12614 97 DMRRL----NIKSSTAVTSGTCWCLSVHKKKRLLAAGT--EQGHINLFQIS-DEGLLYEKLLDRQQGRILCTAWHS---S 166 (708)
Q Consensus 97 d~~~~----~~~~~~~~~~~~v~~~~~s~~~~~la~~~--~d~~i~iwd~~-~~~~~~~~~~~~~~~~v~~~~~s~---d 166 (708)
-+... .....-.+|...|+.+ ++++++.+++ .|+.|++|++. +++.+ ..+..|...+..++|+| +
T Consensus 118 a~spd~~~~~~~l~s~g~~~~v~~l---~~g~lv~ss~~g~d~~V~~~~~s~dG~~~--~s~~~~~~~v~~l~fs~~~g~ 192 (356)
T 2w18_A 118 FCSSDDESEKQVLLKSGNIKAVLGL---TKRRLVSSSGTLSDQQVEVMTFAEDGGGK--ENQFLMPPEETILTFAEVQGM 192 (356)
T ss_dssp CC------CCEEEEEEEEEEEEEEE---TTTEEEEEESSSTTCEEEEEEECTTSCEE--EEEEECCCSSCEEEEEEEETS
T ss_pred EECCCccccccEEEeCCCeEEEEec---CCCcEEEecccCCCCcEEEEEECCCCcee--eeeccCCCceeeEEeeccCCC
Confidence 11111 1111112333344443 4554444433 48889999984 46665 56667888888888888 7
Q ss_pred CCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-E------------EEEcCCCcEEEEeCC
Q psy12614 167 GDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-I------------ITGDSGGFVRFWDGK 232 (708)
Q Consensus 167 ~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l------------~~~~~dg~i~~wd~~ 232 (708)
+.+|++++.| +|++||+.+|+.++++..++ .+...+.+++|+|+|. + ++|+.|++|++||..
T Consensus 193 ~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~----~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~ 268 (356)
T 2w18_A 193 QEALLGTTIMNNIVIWNLKTGQLLKKMHIDD----SYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPK 268 (356)
T ss_dssp TTEEEEEETTSEEEEEETTTCCEEEEEECCC-------CCCEEEEEEETTEEEEEEC------------CCEEEEEEETT
T ss_pred CceEEEecCCCcEEEEECCCCcEEEEEcCCC----cceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECC
Confidence 7999999999 99999999999999987432 2245688889999996 3 457789999999999
Q ss_pred CCeeEEEe-----eccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceE-
Q psy12614 233 TGVQWSDV-----KTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVK- 306 (708)
Q Consensus 233 ~~~~~~~~-----~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~- 306 (708)
+++.+..+ .+|...+.+..++ +.++++++.|++|++||+.+ |+ ....+.+|...+.
T Consensus 269 tgk~l~v~~~~~p~Gh~~~~lsg~~s--g~~lASgS~DgTIkIWDl~t--------Gk--------~l~tL~gH~~~vvs 330 (356)
T 2w18_A 269 TTLSVGVMLYCLPPGQAGRFLEGDVK--DHCAAAILTSGTIAIWDLLL--------GQ--------CTALLPPVSDQHWS 330 (356)
T ss_dssp TTEEEEEEEECCCTTCCCCEEEEEEE--TTEEEEEETTSCEEEEETTT--------CS--------EEEEECCC--CCCC
T ss_pred CCEEEEEEEeeccCCCcceeEccccC--CCEEEEEcCCCcEEEEECCC--------Cc--------EEEEecCCCCCeEE
Confidence 99887765 3666655544444 78999999999999999999 87 7788888887765
Q ss_pred EEEEe--CCEEEEEcCCCeEEEEeC
Q psy12614 307 SLALH--GNRLYSGGLDSYLSLSYY 329 (708)
Q Consensus 307 ~l~~~--~~~l~s~~~d~~i~iw~~ 329 (708)
.++|+ +++|++|+.|++|++||+
T Consensus 331 ~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 331 FVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp EEEECSSSSEEEEECTTSCEEEEEE
T ss_pred EEEECCCCCEEEEEECCCcEEEecC
Confidence 58999 889999999999999986
|
| >3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.96 E-value=4.3e-28 Score=242.32 Aligned_cols=259 Identities=11% Similarity=0.088 Sum_probs=195.6
Q ss_pred CCEEEEEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEcc---------CCcEEEEEec
Q psy12614 81 NDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQIS---------DEGLLYEKLL 151 (708)
Q Consensus 81 ~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~---------~~~~~~~~~~ 151 (708)
+.+|++|+.||+|++||+++++.+..+. ...|.+++|+|+ +++++.|+.|++|+.. +++... ...
T Consensus 48 ~~~l~sg~~Dg~v~iwd~~~~~~~~~~~--~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~-~~~ 121 (343)
T 3lrv_A 48 KWVCMCRCEDGALHFTQLKDSKTITTIT--TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVLR-EIE 121 (343)
T ss_dssp EEEEEEEEETTEEEEEEESSSSCEEEEE--EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEEE-EEE
T ss_pred CCEEEEECCCCcEEEEECCCCcEEEEEe--cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcceeE-Eee
Confidence 7889999999999999999999888877 366888899998 9999999999999765 444332 233
Q ss_pred ccccccEEEEEECC--CCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEE
Q psy12614 152 DRQQGRILCTAWHS--SGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVR 227 (708)
Q Consensus 152 ~~~~~~v~~~~~s~--d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~ 227 (708)
.+|.+.|.+++|+| +++++++++.| .|++||+++++........ +...+.+++|+|++. +++|+.||.|+
T Consensus 122 ~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~------~~~~i~~~~~~pdg~~lasg~~dg~i~ 195 (343)
T 3lrv_A 122 VDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAK------SDVEYSSGVLHKDSLLLALYSPDGILD 195 (343)
T ss_dssp CCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCC------SSCCCCEEEECTTSCEEEEECTTSCEE
T ss_pred cCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecC------CCCceEEEEECCCCCEEEEEcCCCEEE
Confidence 36678899999999 99999999999 9999999999886555332 255799999999996 88899999999
Q ss_pred EEeCCCCeeE-EEeec-cccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccce
Q psy12614 228 FWDGKTGVQW-SDVKT-HKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDV 305 (708)
Q Consensus 228 ~wd~~~~~~~-~~~~~-~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v 305 (708)
+||+++++.+ ..+.. |...|.+++|+|++.+|++++ ++.|++||++. ++... ....+..|...+
T Consensus 196 iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~--------~~~~~-----~~~~~~~~~~~~ 261 (343)
T 3lrv_A 196 VYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRK--------DVGTL-----AYPTYTIPEFKT 261 (343)
T ss_dssp EEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTS--------STTCB-----SSCCCBC-----
T ss_pred EEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCC--------CCcce-----eecccccccccc
Confidence 9999999887 78887 999999999999999999999 55999999988 43000 011111233333
Q ss_pred --EEEEEe--CCEEEEEcC-CCeEEEEeCCCCc--eeecCccCCCCceEEEEc---CCcEEEE-EcCCeEEEEEec
Q psy12614 306 --KSLALH--GNRLYSGGL-DSYLSLSYYPPKT--LVKYPCTLAQSTPVSLAK---DIQHVLL-QYTSHLELWSLG 370 (708)
Q Consensus 306 --~~l~~~--~~~l~s~~~-d~~i~iw~~~~~~--~~~~~~~~~~~~~~~~s~---~~~~l~~-~~~~~i~i~~~~ 370 (708)
.+++|+ +.+|++++. |+.+++|++.... ... .....+.+++ +.+.+++ +.++.+.++-..
T Consensus 262 ~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~ 332 (343)
T 3lrv_A 262 GTVTYDIDDSGKNMIAYSNESNSLTIYKFDKKTKNWTK-----DEESALCLQSDTADFTDMDVVCGDGGIAAILKT 332 (343)
T ss_dssp CCEEEEECTTSSEEEEEETTTTEEEEEEECTTTCSEEE-----EEEEECCC----CCCCEEEEEEETTEEEEEEEC
T ss_pred cceEEEECCCCCEEEEecCCCCcEEEEEEcccccceEe-----cCceeEecCccccccceeEEEecCCceEEEEec
Confidence 468888 889999888 9999999986543 111 1122344555 5555554 466666665433
|
| >2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A | Back alignment and structure |
|---|
Probab=99.96 E-value=4.1e-27 Score=240.59 Aligned_cols=295 Identities=10% Similarity=0.022 Sum_probs=233.2
Q ss_pred CCcEEEEEEcCCCC-EEEEEe----CCC----cEEEEeC--CCCCeE-EEEEecCCCCCcEEEEEEe-------------
Q psy12614 26 PKVINCIACEPKSS-RLAVSR----ADQ----SIEIWDI--SETPHV-DRVFIGDPLSNSIECLTWF------------- 80 (708)
Q Consensus 26 ~~~v~~~~~s~~~~-~la~~~----~dg----~v~iwd~--~~~~~~-~~~~~~h~~~~~v~~l~~~------------- 80 (708)
...+...+|++.|. ++++|+ .+| .|+|||+ .+++.+ ...+.+|. ..+..+++.
T Consensus 62 ~~~~~~~~w~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~d~~~~~~~g~~ 139 (415)
T 2hqs_A 62 AQEVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNK--QWLRYAGHTASDEVFEKLTGIK 139 (415)
T ss_dssp GGGCCHHHHHTTTCCEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEEEEEEECG--GGHHHHHHHHHHHHHHHHHSSC
T ss_pred ccCcCHHHHHhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEeeeEEEcCh--hHHHHHHHHHHHHHHHHHcCCC
Confidence 34677888888875 566775 467 8999999 888766 24688888 777777665
Q ss_pred ---CCEEEEEcCC------CcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCC---cEEEEEccCCcEEEE
Q psy12614 81 ---NDRLFSGGLQ------GFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQG---HINLFQISDEGLLYE 148 (708)
Q Consensus 81 ---~~~l~s~~~d------~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~---~i~iwd~~~~~~~~~ 148 (708)
+.+++.++.+ ++|++||+.. .....+..|...+.+++|+|||++||+++.++ .|++||+.+++..
T Consensus 140 ~~~~~~l~~~s~~~~~~~~~~i~i~d~~g-~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~-- 216 (415)
T 2hqs_A 140 GAFRTRIAYVVQTNGGQFPYELRVSDYDG-YNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR-- 216 (415)
T ss_dssp CCTTCEEEEEEECSSSSCCEEEEEEETTS-CSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE--
T ss_pred CcCCCEEEEEEecCCCCccceEEEEcCCC-CCCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE--
Confidence 5677766654 7999999975 55677888999999999999999999999875 9999999998874
Q ss_pred EecccccccEEEEEECCCCCEEE-EecCC---eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcC-
Q psy12614 149 KLLDRQQGRILCTAWHSSGDYLV-TGCAA---AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDS- 222 (708)
Q Consensus 149 ~~~~~~~~~v~~~~~s~d~~~l~-~~~~d---~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~- 222 (708)
.+..|.+.+.+++|+|||++|+ +++.+ .|++||+.+++.. .+. .+...+.+++|+|||+ +++++.
T Consensus 217 -~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~-~l~-------~~~~~~~~~~~spdg~~l~~~s~~ 287 (415)
T 2hqs_A 217 -QVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIR-QVT-------DGRSNNTEPTWFPDSQNLAFTSDQ 287 (415)
T ss_dssp -EEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-ECC-------CCSSCEEEEEECTTSSEEEEEECT
T ss_pred -EeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEE-eCc-------CCCCcccceEECCCCCEEEEEECC
Confidence 4566788899999999999888 55544 5999999988763 332 2367799999999996 666654
Q ss_pred CC--cEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEecC---CeEEEEEccCCcccccCCCCCCCCcceEEeEE
Q psy12614 223 GG--FVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVD---PTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVN 297 (708)
Q Consensus 223 dg--~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d---g~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~ 297 (708)
++ .|++||+.+++. ..+..+...+.+++|+|||++|++++.+ ..|++||+.+ ++ ...
T Consensus 288 ~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~--------~~---------~~~ 349 (415)
T 2hqs_A 288 AGRPQVYKVNINGGAP-QRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLAT--------GG---------VQV 349 (415)
T ss_dssp TSSCEEEEEETTSSCC-EECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTT--------CC---------EEE
T ss_pred CCCcEEEEEECCCCCE-EEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCC--------CC---------EEE
Confidence 44 688889988764 4455577788999999999999988764 5899999998 64 234
Q ss_pred EeccccceEEEEEe--CCEEEEEcCCC---eEEEEeCCCCceeecCccCCCCceEEEEcCC
Q psy12614 298 RVIHEGDVKSLALH--GNRLYSGGLDS---YLSLSYYPPKTLVKYPCTLAQSTPVSLAKDI 353 (708)
Q Consensus 298 ~~~~~~~v~~l~~~--~~~l~s~~~d~---~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~ 353 (708)
+..+. .+.+++|+ ++.|++++.++ .|.+||+.+.....+..+......++|+|..
T Consensus 350 l~~~~-~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~~~~~l~~~~~~v~~~~~~~~~ 409 (415)
T 2hqs_A 350 LSSTF-LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARLPATDGQVKFPAWSPYL 409 (415)
T ss_dssp CCCSS-SCEEEEECTTSSEEEEEEEETTEEEEEEEETTSCCEEECCCSSSEEEEEEECCCC
T ss_pred ecCCC-CcCCeEEcCCCCEEEEEEcCCCccEEEEEECCCCcEEEeeCCCCCCcCCcccccc
Confidence 44554 88999999 88888888777 8999999988888887666677888888864
|
| >1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=9.4e-26 Score=237.37 Aligned_cols=320 Identities=10% Similarity=0.003 Sum_probs=246.4
Q ss_pred EEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEEC--CCCeEeEEEe
Q psy12614 33 ACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDM--RRLNIKSSTA 108 (708)
Q Consensus 33 ~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~--~~~~~~~~~~ 108 (708)
+|+|++.++++++.|++|.+||..+++.+. .+..+. . +..++|+ +++|++++.|++|.+||+ .+++.+..+.
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~D~~t~~~~~-~i~~g~--~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~ 219 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALVDGDSKKIVK-VIDTGY--A-VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIK 219 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEEETTTCCEEE-EEECST--T-EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEE
T ss_pred ccCCCCEEEEEEcCCCeEEEEECCCceEEE-EEecCc--c-cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEe
Confidence 489999999999999999999999999876 676444 3 8899999 899999999999999999 8899888887
Q ss_pred ecCCceEEEEEec----CCCEEEEEeC-CCcEEEEEccCCcEEEEEeccc--------cc-ccEEEEEECCCCCEEEE-e
Q psy12614 109 VTSGTCWCLSVHK----KKRLLAAGTE-QGHINLFQISDEGLLYEKLLDR--------QQ-GRILCTAWHSSGDYLVT-G 173 (708)
Q Consensus 109 ~~~~~v~~~~~s~----~~~~la~~~~-d~~i~iwd~~~~~~~~~~~~~~--------~~-~~v~~~~~s~d~~~l~~-~ 173 (708)
+...+..++|+| ||++|++++. +++|.+||..+++.+......+ |. ..+..+.++|++..++. .
T Consensus 220 -~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~ 298 (543)
T 1nir_A 220 -IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNV 298 (543)
T ss_dssp -CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEE
T ss_pred -cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEE
Confidence 456789999999 9999999875 8999999999998873322221 22 37899999998876654 4
Q ss_pred cCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EE-EEcCCCcEEEEeCCCCeeEEEeec----cccC
Q psy12614 174 CAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-II-TGDSGGFVRFWDGKTGVQWSDVKT----HKKD 246 (708)
Q Consensus 174 ~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~-~~~~dg~i~~wd~~~~~~~~~~~~----~~~~ 246 (708)
..+ .|.+||+.+++.+....... ...+.+++|+|+|+ ++ ++..++.|.+||..+++++..+.. |.+.
T Consensus 299 ~~~g~i~vvd~~~~~~l~~~~i~~------~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~ 372 (543)
T 1nir_A 299 KETGKVLLVNYKDIDNLTVTSIGA------APFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGR 372 (543)
T ss_dssp TTTTEEEEEECTTSSSCEEEEEEC------CSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTT
T ss_pred CCCCeEEEEEecCCCcceeEEecc------CcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCC
Confidence 555 99999998876554222221 45577899999996 44 555689999999999999888764 5444
Q ss_pred eEEEEEeCC-CCEEEEEe-cCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEEEc---
Q psy12614 247 ILALTVSED-ENYLYCAG-VDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSGG--- 319 (708)
Q Consensus 247 i~~~~~s~~-~~~l~~~~-~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~~--- 319 (708)
...+ ++|+ +..++++. .|++|.+|+..+ ... ....|.....+..|...+..++++ ++.|++++
T Consensus 373 g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~--------~~~-~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~ 442 (543)
T 1nir_A 373 GANF-VHPKYGPVWSTSHLGDGSISLIGTDP--------KNH-PQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFN 442 (543)
T ss_dssp CEEE-EETTTEEEEEEEBSSSSEEEEEECCT--------TTC-TTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTC
T ss_pred Cccc-CCCCCccEEEeccCCCceEEEEEeCC--------CCC-chhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCC
Confidence 4343 4777 55556654 579999999976 210 112255778888998888999999 88898887
Q ss_pred ----CCCeEEEEeCCCCcee--ec--------CccCCCCceEEEEcCCcEEEEE------cCCeEEEEEecCCC
Q psy12614 320 ----LDSYLSLSYYPPKTLV--KY--------PCTLAQSTPVSLAKDIQHVLLQ------YTSHLELWSLGSAQ 373 (708)
Q Consensus 320 ----~d~~i~iw~~~~~~~~--~~--------~~~~~~~~~~~~s~~~~~l~~~------~~~~i~i~~~~~~~ 373 (708)
.+++|.+||+.+.... .+ .........+.|+|+|+.+.++ .++.|.+||..+.+
T Consensus 443 ~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~t~~ 516 (543)
T 1nir_A 443 PDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLK 516 (543)
T ss_dssp SSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEECSSSSEEEEEEECCTTSCCEEEEEETTTTE
T ss_pred CCcccCceEEEEECCCCCCCeEEeechhhcccCCCCCceEeccCCCCCCEEEEEeecCCCCCCeEEEEECCCce
Confidence 2779999999987632 22 2223345678999999998864 26899999999865
|
| >1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.9e-25 Score=234.98 Aligned_cols=317 Identities=11% Similarity=0.042 Sum_probs=241.0
Q ss_pred Ee--CCEEEEEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEc--cCCcEEEEEecccc
Q psy12614 79 WF--NDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQI--SDEGLLYEKLLDRQ 154 (708)
Q Consensus 79 ~~--~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~--~~~~~~~~~~~~~~ 154 (708)
|+ +..+++++.|++|.+||..+++++.++..+.. +..++|+|||++|++++.|+.|.+||+ .+++.+ ..+. +
T Consensus 145 ~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~--~~i~-~ 220 (543)
T 1nir_A 145 LDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKV--AEIK-I 220 (543)
T ss_dssp CCGGGEEEEEEGGGTEEEEEETTTCCEEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEE--EEEE-C
T ss_pred cCCCCEEEEEEcCCCeEEEEECCCceEEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEE--EEEe-c
Confidence 55 67788889999999999999999999884433 899999999999999999999999999 777765 4554 3
Q ss_pred cccEEEEEECC----CCCEEEEecC-C-eEEEEEcCCCceEEEEEecccC----CCCCceeEEEEEEccCC-E-EEEEcC
Q psy12614 155 QGRILCTAWHS----SGDYLVTGCA-A-AVRVWDIHKGHAIHKMSLDKSS----KFSKNTAVWCVAFCADF-T-IITGDS 222 (708)
Q Consensus 155 ~~~v~~~~~s~----d~~~l~~~~~-d-~i~iwd~~~~~~~~~~~~~~~~----~~~~~~~v~~~~~~~~~-~-l~~~~~ 222 (708)
...+..++|+| ||++|++++. + +|.+||..+++.+..+...... .|.....+..+.++|++ . +++...
T Consensus 221 g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~ 300 (543)
T 1nir_A 221 GIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKE 300 (543)
T ss_dssp CSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETT
T ss_pred CCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECC
Confidence 45679999999 9999999885 5 9999999999999888753100 00013368899999987 3 678888
Q ss_pred CCcEEEEeCCCCeeEE--EeeccccCeEEEEEeCCCCEEEEEe-cCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEe
Q psy12614 223 GGFVRFWDGKTGVQWS--DVKTHKKDILALTVSEDENYLYCAG-VDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRV 299 (708)
Q Consensus 223 dg~i~~wd~~~~~~~~--~~~~~~~~i~~~~~s~~~~~l~~~~-~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 299 (708)
++.|.+||..+++.+. .+. +...+..++|+|+|+++++++ .++.|.+||..+ ++ ....+.
T Consensus 301 ~g~i~vvd~~~~~~l~~~~i~-~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~t--------g~--------l~~~i~ 363 (543)
T 1nir_A 301 TGKVLLVNYKDIDNLTVTSIG-AAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKD--------RR--------LSALVD 363 (543)
T ss_dssp TTEEEEEECTTSSSCEEEEEE-CCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTT--------TE--------EEEEEE
T ss_pred CCeEEEEEecCCCcceeEEec-cCcCccCceECCCCCEEEEEecCCCeEEEEECCC--------Ce--------EEEeec
Confidence 9999999998865443 443 566788999999999877665 588999999998 64 334444
Q ss_pred c----cccceEEEEEe--CCEEEEEc-CCCeEEEEeCCC-------Cc-eeecCccCCCCceEEEEcCCcEEEEEc----
Q psy12614 300 I----HEGDVKSLALH--GNRLYSGG-LDSYLSLSYYPP-------KT-LVKYPCTLAQSTPVSLAKDIQHVLLQY---- 360 (708)
Q Consensus 300 ~----~~~~v~~l~~~--~~~l~s~~-~d~~i~iw~~~~-------~~-~~~~~~~~~~~~~~~~s~~~~~l~~~~---- 360 (708)
. |.+....+... +..++++. .|++|.+|++.+ .+ +..+..+......+.++|+++.|.+..
T Consensus 364 ~g~~ph~g~g~~~~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~ 443 (543)
T 1nir_A 364 VGKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNP 443 (543)
T ss_dssp CSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCS
T ss_pred cCCCCCCCCCcccCCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCC
Confidence 2 54444444322 45566665 589999999987 33 455554445567899999999999964
Q ss_pred ----CCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEE-----EecCCCceEEEEeCCCCcEEEEE------cCCc
Q psy12614 361 ----TSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKM-----SAVNNATIRCSVVSNDGKYVAYS------TESC 425 (708)
Q Consensus 361 ----~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~i~~~~~s~~g~~l~~~------~d~~ 425 (708)
++.|.+||+.+.+. ....+.+ ...+...+..++|+|+|+.++++ .++.
T Consensus 444 ~~~~~~~v~v~d~~~~~~-----------------~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~ 506 (543)
T 1nir_A 444 DARISQSVAVFDLKNLDA-----------------KYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSA 506 (543)
T ss_dssp SHHHHTCEEEEETTCTTS-----------------CCEEECHHHHHCCCSSCCEEEEEEECSSSSEEEEEEECCTTSCCE
T ss_pred CcccCceEEEEECCCCCC-----------------CeEEeechhhcccCCCCCceEeccCCCCCCEEEEEeecCCCCCCe
Confidence 67999999998761 1011111 12446789999999999999964 2699
Q ss_pred eEEEEEEe
Q psy12614 426 VRLHSLDL 433 (708)
Q Consensus 426 i~i~~~~~ 433 (708)
|.|||..+
T Consensus 507 i~v~D~~t 514 (543)
T 1nir_A 507 LVVVDDKT 514 (543)
T ss_dssp EEEEETTT
T ss_pred EEEEECCC
Confidence 99999876
|
| >2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A | Back alignment and structure |
|---|
Probab=99.95 E-value=4.2e-25 Score=225.70 Aligned_cols=292 Identities=13% Similarity=0.062 Sum_probs=226.9
Q ss_pred CcEEEEEEe---CCEEEEEc----CCC----cEEEEEC--CCCeEe--EEEeecCCceEEEEEec--------------C
Q psy12614 72 NSIECLTWF---NDRLFSGG----LQG----FVNEYDM--RRLNIK--SSTAVTSGTCWCLSVHK--------------K 122 (708)
Q Consensus 72 ~~v~~l~~~---~~~l~s~~----~d~----~i~vwd~--~~~~~~--~~~~~~~~~v~~~~~s~--------------~ 122 (708)
..+...+|. .+.+++|+ .+| +|++||+ .+++++ ..+.+|...+..+++++ .
T Consensus 63 ~~~~~~~w~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~ 142 (415)
T 2hqs_A 63 QEVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAF 142 (415)
T ss_dssp GGCCHHHHHTTTCCEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCCCT
T ss_pred cCcCHHHHHhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCCcC
Confidence 356667776 45666775 567 8999999 998877 55889988888888775 2
Q ss_pred CCEEEEEeCC------CcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC----eEEEEEcCCCceEEEE
Q psy12614 123 KRLLAAGTEQ------GHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA----AVRVWDIHKGHAIHKM 192 (708)
Q Consensus 123 ~~~la~~~~d------~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d----~i~iwd~~~~~~~~~~ 192 (708)
+..++.++.+ +.|++||+.++.. ..+..|...+.+++|+|||++|++++.+ .|++||+.+++... +
T Consensus 143 ~~~l~~~s~~~~~~~~~~i~i~d~~g~~~---~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~-l 218 (415)
T 2hqs_A 143 RTRIAYVVQTNGGQFPYELRVSDYDGYNQ---FVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQ-V 218 (415)
T ss_dssp TCEEEEEEECSSSSCCEEEEEEETTSCSC---EEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEE-E
T ss_pred CCEEEEEEecCCCCccceEEEEcCCCCCC---EEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEE-e
Confidence 6677776654 7999999987655 5677788999999999999999998754 89999999988753 3
Q ss_pred EecccCCCCCceeEEEEEEccCCE-EE-EEcCCCc--EEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEec-CC-
Q psy12614 193 SLDKSSKFSKNTAVWCVAFCADFT-II-TGDSGGF--VRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGV-DP- 266 (708)
Q Consensus 193 ~~~~~~~~~~~~~v~~~~~~~~~~-l~-~~~~dg~--i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~-dg- 266 (708)
. .+...+.+++|+|||+ ++ +++.++. |++||+.+++. ..+..|...+.+++|+|||++|++++. ++
T Consensus 219 ~-------~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~ 290 (415)
T 2hqs_A 219 A-------SFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI-RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGR 290 (415)
T ss_dssp E-------CCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-EECCCCSSCEEEEEECTTSSEEEEEECTTSS
T ss_pred e-------cCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE-EeCcCCCCcccceEECCCCCEEEEEECCCCC
Confidence 3 2266899999999996 55 6666654 99999988776 566778889999999999999998876 44
Q ss_pred -eEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEEEcCC---CeEEEEeCCCCceeecCcc
Q psy12614 267 -TVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSGGLD---SYLSLSYYPPKTLVKYPCT 340 (708)
Q Consensus 267 -~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~~~d---~~i~iw~~~~~~~~~~~~~ 340 (708)
.|++||+.+ ++ ...+..+...+.+++|+ +++|++++.+ ..|.+||+.+.....+...
T Consensus 291 ~~i~~~d~~~--------~~---------~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~~l~~~ 353 (415)
T 2hqs_A 291 PQVYKVNING--------GA---------PQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLSST 353 (415)
T ss_dssp CEEEEEETTS--------SC---------CEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEEECCCS
T ss_pred cEEEEEECCC--------CC---------EEEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEEEecCC
Confidence 677888877 53 23445567788899998 8888887764 5899999999887766633
Q ss_pred CCCCceEEEEcCCcEEEEE-cCC---eEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCC
Q psy12614 341 LAQSTPVSLAKDIQHVLLQ-YTS---HLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDG 415 (708)
Q Consensus 341 ~~~~~~~~~s~~~~~l~~~-~~~---~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g 415 (708)
.....++|+|+|+.|+++ .++ .|.+|++.... ......+.+.|.+++|+|.-
T Consensus 354 -~~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~~----------------------~~~l~~~~~~v~~~~~~~~~ 409 (415)
T 2hqs_A 354 -FLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRF----------------------KARLPATDGQVKFPAWSPYL 409 (415)
T ss_dssp -SSCEEEEECTTSSEEEEEEEETTEEEEEEEETTSCC----------------------EEECCCSSSEEEEEEECCCC
T ss_pred -CCcCCeEEcCCCCEEEEEEcCCCccEEEEEECCCCc----------------------EEEeeCCCCCCcCCcccccc
Confidence 367789999999988874 444 68899987533 33445778899999999964
|
| >2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} | Back alignment and structure |
|---|
Probab=99.94 E-value=7.3e-25 Score=243.58 Aligned_cols=318 Identities=11% Similarity=0.051 Sum_probs=236.8
Q ss_pred CCcEEEEEEcCCCCEEEEEeC-CC-----cEEEEeCCCCCeEEEEEecCCCC----------------------CcEEEE
Q psy12614 26 PKVINCIACEPKSSRLAVSRA-DQ-----SIEIWDISETPHVDRVFIGDPLS----------------------NSIECL 77 (708)
Q Consensus 26 ~~~v~~~~~s~~~~~la~~~~-dg-----~v~iwd~~~~~~~~~~~~~h~~~----------------------~~v~~l 77 (708)
...|.+++|||||++||+++. || .|.+||+.+++... .+..+... ..|.++
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 114 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRL-LVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDY 114 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEE-EECGGGTC--------------------CCEESCCC
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeE-ccchhhcccccccccchhhhhhhhhhhccccCccee
Confidence 567999999999999999988 88 89999999988765 55554411 137889
Q ss_pred EEe--CCEEEEEcCCCcEEEEECCCCe--EeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEeccc
Q psy12614 78 TWF--NDRLFSGGLQGFVNEYDMRRLN--IKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDR 153 (708)
Q Consensus 78 ~~~--~~~l~s~~~d~~i~vwd~~~~~--~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~ 153 (708)
+|+ |++|++++. +.|.+||+.++. ....+..|...+.+++|||||++||+++ ++.|++||+.+++.. .....
T Consensus 115 ~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~--~~~~~ 190 (741)
T 2ecf_A 115 QWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQM--QLTAD 190 (741)
T ss_dssp EECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEE--ECCCC
T ss_pred EECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCEE--EeccC
Confidence 999 888888876 999999999883 4455677888899999999999999987 468999999988765 33333
Q ss_pred cccc----------------EEEEEECCCCCEEEEecCC----------------------------------eEEEEEc
Q psy12614 154 QQGR----------------ILCTAWHSSGDYLVTGCAA----------------------------------AVRVWDI 183 (708)
Q Consensus 154 ~~~~----------------v~~~~~s~d~~~l~~~~~d----------------------------------~i~iwd~ 183 (708)
+... +..++|||||++|++++.+ .|.+||+
T Consensus 191 ~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~ 270 (741)
T 2ecf_A 191 GSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISP 270 (741)
T ss_dssp CCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECS
T ss_pred CccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEEC
Confidence 3322 4789999999999887532 6888999
Q ss_pred CC-CceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEc-----CCCcEEEEeCCCCeeEEEeecccc----CeEEEEE
Q psy12614 184 HK-GHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGD-----SGGFVRFWDGKTGVQWSDVKTHKK----DILALTV 252 (708)
Q Consensus 184 ~~-~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~-----~dg~i~~wd~~~~~~~~~~~~~~~----~i~~~~~ 252 (708)
.+ ++........ .+...+..++| |||+ ++++. .+..|++||+.+++....+..+.. .+..++|
T Consensus 271 ~~~~~~~~~~~~~-----~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~ 344 (741)
T 2ecf_A 271 AEQAQTQWIDLGK-----EQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRF 344 (741)
T ss_dssp STTCCCEEECCCS-----CSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEE
T ss_pred CCCCceEEecCCC-----CcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEE
Confidence 88 7754432211 23788999999 9996 55443 256899999999988777765543 4568999
Q ss_pred eCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEE-EEe--CCEEE-EEcCCC--eEEE
Q psy12614 253 SEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSL-ALH--GNRLY-SGGLDS--YLSL 326 (708)
Q Consensus 253 s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l-~~~--~~~l~-s~~~d~--~i~i 326 (708)
+|||+++++++.||.+.+|.+.. .. ....+..|...+..+ .|+ ++.++ +++.++ .+++
T Consensus 345 spdg~~~~~~~~~g~~~l~~~~~--------~~--------~~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l 408 (741)
T 2ecf_A 345 LDDGSILWSSERTGFQHLYRIDS--------KG--------KAAALTHGNWSVDELLAVDEKAGLAYFRAGIESARESQI 408 (741)
T ss_dssp CTTSCEEEEECTTSSCEEEEECS--------SS--------CEEESCCSSSCEEEEEEEETTTTEEEEEECSSCTTCBEE
T ss_pred CCCCeEEEEecCCCccEEEEEcC--------CC--------CeeeeeecceEEEeEeEEeCCCCEEEEEEeCCCCceEEE
Confidence 99999999999999888887763 11 134556677778877 488 66664 555555 8889
Q ss_pred EeCCC--CceeecCccCCCCceEEEEcCCcEEEEE--cC---CeEEEEEecC
Q psy12614 327 SYYPP--KTLVKYPCTLAQSTPVSLAKDIQHVLLQ--YT---SHLELWSLGS 371 (708)
Q Consensus 327 w~~~~--~~~~~~~~~~~~~~~~~~s~~~~~l~~~--~~---~~i~i~~~~~ 371 (708)
|++.. .....+.. ......++|+|||+.++.. .. ..+.+++...
T Consensus 409 ~~~~~~g~~~~~l~~-~~~~~~~~~spdg~~l~~~~~~~~~p~~~~l~~~~~ 459 (741)
T 2ecf_A 409 YAVPLQGGQPQRLSK-APGMHSASFARNASVYVDSWSNNSTPPQIELFRANG 459 (741)
T ss_dssp EEEETTCCCCEECCC-SCSEEEEEECTTSSEEEEEEEETTEEEEEEEEETTS
T ss_pred EEEEcCCCCeeeccc-CCCceEEEECCCCCEEEEEecCCCCCCeEEEEEcCC
Confidence 98753 33455552 4445689999999998874 22 3578887654
|
| >2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} | Back alignment and structure |
|---|
Probab=99.93 E-value=4.4e-24 Score=237.34 Aligned_cols=317 Identities=9% Similarity=-0.002 Sum_probs=230.2
Q ss_pred CcEEEEEEe--CCEEEEEcC-CC-----cEEEEECCCCeEeEEEeecCC------------------------ceEEEEE
Q psy12614 72 NSIECLTWF--NDRLFSGGL-QG-----FVNEYDMRRLNIKSSTAVTSG------------------------TCWCLSV 119 (708)
Q Consensus 72 ~~v~~l~~~--~~~l~s~~~-d~-----~i~vwd~~~~~~~~~~~~~~~------------------------~v~~~~~ 119 (708)
..+.+++|+ |++|++++. |+ .|.+||+.+++....+..+.. .|.+++|
T Consensus 37 ~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 116 (741)
T 2ecf_A 37 PTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQW 116 (741)
T ss_dssp CCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEE
T ss_pred CCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEE
Confidence 679999999 899999988 88 899999999988777765543 3889999
Q ss_pred ecCCCEEEEEeCCCcEEEEEccCC---cEEEEEecccccccEEEEEECCCCCEEEEecCCeEEEEEcCCCceEEEEEecc
Q psy12614 120 HKKKRLLAAGTEQGHINLFQISDE---GLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAAAVRVWDIHKGHAIHKMSLDK 196 (708)
Q Consensus 120 s~~~~~la~~~~d~~i~iwd~~~~---~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~i~iwd~~~~~~~~~~~~~~ 196 (708)
||||++|++++. +.|++||+.++ +. ..+..+...+..++|||||++|++++.+.|++||+.+++.........
T Consensus 117 SpDg~~l~~~~~-~~i~~~d~~~~~~~~~---~~l~~~~~~~~~~~~SPDG~~la~~~~~~i~~~d~~~g~~~~~~~~~~ 192 (741)
T 2ecf_A 117 SPDAQRLLFPLG-GELYLYDLKQEGKAAV---RQLTHGEGFATDAKLSPKGGFVSFIRGRNLWVIDLASGRQMQLTADGS 192 (741)
T ss_dssp CTTSSEEEEEET-TEEEEEESSSCSTTSC---CBCCCSSSCEEEEEECTTSSEEEEEETTEEEEEETTTTEEEECCCCCC
T ss_pred CCCCCEEEEEeC-CcEEEEECCCCCcceE---EEcccCCcccccccCCCCCCEEEEEeCCcEEEEecCCCCEEEeccCCc
Confidence 999999999886 99999999988 55 467778888999999999999999886699999999877654332210
Q ss_pred cCCC-C--------CceeEEEEEEccCCE-EEEEcCCC---------------------------------cEEEEeCCC
Q psy12614 197 SSKF-S--------KNTAVWCVAFCADFT-IITGDSGG---------------------------------FVRFWDGKT 233 (708)
Q Consensus 197 ~~~~-~--------~~~~v~~~~~~~~~~-l~~~~~dg---------------------------------~i~~wd~~~ 233 (708)
...+ + ....+..++|+|||+ |++++.++ .|++||+.+
T Consensus 193 ~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~ 272 (741)
T 2ecf_A 193 TTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAE 272 (741)
T ss_dssp SSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSST
T ss_pred cceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCC
Confidence 0000 0 000147799999996 77776554 789999988
Q ss_pred -CeeEEEee--ccccCeEEEEEeCCCCEEEEEec-----CCeEEEEEccCCcccccCCCCCCCCcceEEeEEEecccc--
Q psy12614 234 -GVQWSDVK--THKKDILALTVSEDENYLYCAGV-----DPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEG-- 303 (708)
Q Consensus 234 -~~~~~~~~--~~~~~i~~~~~s~~~~~l~~~~~-----dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-- 303 (708)
++...... .|...+..++| |||++|++++. +..|++||+.+ ++ ....+..+..
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~--------g~--------~~~~~~~~~~~~ 335 (741)
T 2ecf_A 273 QAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLAS--------NQ--------QRVLAHETSPTW 335 (741)
T ss_dssp TCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTT--------CC--------EEEEEEEECSSC
T ss_pred CCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCC--------Cc--------eEEEEEcCCCCc
Confidence 77655443 37788999999 99999997764 56899999988 65 3333334432
Q ss_pred --ceEEEEEe--CCEEEEEcCCCeEEEEeCC--CCceeecCccCCCCceE-EEEcCCcEEEE-Ec-CC--eEEEEEecCC
Q psy12614 304 --DVKSLALH--GNRLYSGGLDSYLSLSYYP--PKTLVKYPCTLAQSTPV-SLAKDIQHVLL-QY-TS--HLELWSLGSA 372 (708)
Q Consensus 304 --~v~~l~~~--~~~l~s~~~d~~i~iw~~~--~~~~~~~~~~~~~~~~~-~~s~~~~~l~~-~~-~~--~i~i~~~~~~ 372 (708)
.+..++|+ ++++++++.|+.+++|.++ +. ...+.........+ .++|+++.++. +. ++ .+++|++...
T Consensus 336 ~~~~~~~~~spdg~~~~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~ 414 (741)
T 2ecf_A 336 VPLHNSLRFLDDGSILWSSERTGFQHLYRIDSKGK-AAALTHGNWSVDELLAVDEKAGLAYFRAGIESARESQIYAVPLQ 414 (741)
T ss_dssp CCCCSCCEECTTSCEEEEECTTSSCEEEEECSSSC-EEESCCSSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEETT
T ss_pred CCcCCceEECCCCeEEEEecCCCccEEEEEcCCCC-eeeeeecceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEcC
Confidence 44678888 7788899999977777654 44 55555333333444 59999987765 43 33 7899998642
Q ss_pred CCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEEE--cC---CceEEEEE
Q psy12614 373 QSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYS--TE---SCVRLHSL 431 (708)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~--~d---~~i~i~~~ 431 (708)
. .....+ .. ...+..++|+|||++|++. +. ..+.+++.
T Consensus 415 g-------------------~~~~~l-~~-~~~~~~~~~spdg~~l~~~~~~~~~p~~~~l~~~ 457 (741)
T 2ecf_A 415 G-------------------GQPQRL-SK-APGMHSASFARNASVYVDSWSNNSTPPQIELFRA 457 (741)
T ss_dssp C-------------------CCCEEC-CC-SCSEEEEEECTTSSEEEEEEEETTEEEEEEEEET
T ss_pred C-------------------CCeeec-cc-CCCceEEEECCCCCEEEEEecCCCCCCeEEEEEc
Confidence 2 011112 12 4567899999999999873 22 35666664
|
| >1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24 | Back alignment and structure |
|---|
Probab=99.93 E-value=1.9e-24 Score=239.53 Aligned_cols=226 Identities=8% Similarity=-0.023 Sum_probs=172.9
Q ss_pred CcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCC---cEEEEEEe--CCEEEEEcCC---------Cc
Q psy12614 27 KVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSN---SIECLTWF--NDRLFSGGLQ---------GF 92 (708)
Q Consensus 27 ~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~---~v~~l~~~--~~~l~s~~~d---------~~ 92 (708)
..+.+++|+|||+++++ +.||+|++||+.+++... .+.+|. . .|.+++|+ |++|++++.+ +.
T Consensus 17 ~~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~~-~~~~~~--~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~ 92 (723)
T 1xfd_A 17 IHDPEAKWISDTEFIYR-EQKGTVRLWNVETNTSTV-LIEGKK--IESLRAIRYEISPDREYALFSYNVEPIYQHSYTGY 92 (723)
T ss_dssp CCCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCEE-EECTTT--TTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSE
T ss_pred ccccccEEcCCCcEEEE-eCCCCEEEEECCCCcEEE-Eecccc--ccccccceEEECCCCCEEEEEecCccceeecceee
Confidence 34678999999998877 689999999999988765 777766 4 49999999 8999988764 78
Q ss_pred EEEEECCCCeEeEEEe---ecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccc-------------
Q psy12614 93 VNEYDMRRLNIKSSTA---VTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQG------------- 156 (708)
Q Consensus 93 i~vwd~~~~~~~~~~~---~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~------------- 156 (708)
|.+||+.+++. ..+. .|...+..++|||||++||+++. +.|++||+.+++.. .....+..
T Consensus 93 i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~--~~~~~~~~~~~~~g~~~~v~~ 168 (723)
T 1xfd_A 93 YVLSKIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAI--RVVSTGKEGVIYNGLSDWLYE 168 (723)
T ss_dssp EEEEESSSCCC-EECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCE--EEECCCBTTTEEEEECCHHHH
T ss_pred EEEEECCCCce-EeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceE--EEecCCCCCceECcccceeEE
Confidence 88999999876 3333 34445889999999999999876 78999999988765 33333222
Q ss_pred -----cEEEEEECCCCCEEEEecCC--eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEEEEcCCCcEEEE
Q psy12614 157 -----RILCTAWHSSGDYLVTGCAA--AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFW 229 (708)
Q Consensus 157 -----~v~~~~~s~d~~~l~~~~~d--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~w 229 (708)
.+.+++|||||++|++++.+ .+.+|++..... .....+..+.|.++|.. ..+..|++|
T Consensus 169 ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~G~~---~~~~~l~~~ 233 (723)
T 1xfd_A 169 EEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTG------------SIYPTVKPYHYPKAGSE---NPSISLHVI 233 (723)
T ss_dssp HTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSS------------SSSCCCEEEECCBTTSC---CCEEEEEEE
T ss_pred EEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCC------------cCCCcceeccCCCCCCC---CCeeEEEEE
Confidence 23789999999999988765 677887643221 11334778888887742 334589999
Q ss_pred eCCCCeeEEEeecc------ccCeEEEEEeCCCCEEEEEecC----CeEEEEEccC
Q psy12614 230 DGKTGVQWSDVKTH------KKDILALTVSEDENYLYCAGVD----PTVVCFQRTR 275 (708)
Q Consensus 230 d~~~~~~~~~~~~~------~~~i~~~~~s~~~~~l~~~~~d----g~i~iw~~~~ 275 (708)
|+.+++....+..+ ...+..++|+|||++|++.... ..|++||+.+
T Consensus 234 d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~ 289 (723)
T 1xfd_A 234 GLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATT 289 (723)
T ss_dssp ESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTT
T ss_pred ECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCC
Confidence 99988865566543 5678999999999988776533 5799999988
|
| >2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=2.5e-23 Score=229.79 Aligned_cols=341 Identities=15% Similarity=0.080 Sum_probs=220.4
Q ss_pred EEEEEEeCCEEEEEcCCCcEEEEECCCCeEe-EEEeecC-----------------CceEEEEEecCCCEEEEEeCCCcE
Q psy12614 74 IECLTWFNDRLFSGGLQGFVNEYDMRRLNIK-SSTAVTS-----------------GTCWCLSVHKKKRLLAAGTEQGHI 135 (708)
Q Consensus 74 v~~l~~~~~~l~s~~~d~~i~vwd~~~~~~~-~~~~~~~-----------------~~v~~~~~s~~~~~la~~~~d~~i 135 (708)
+..+.|.++.+++++.++ | +||+.+++.+ ..+..+. ..|.+++|||| +.++.+. ++.|
T Consensus 28 ~~~~~w~g~~~~~~~~~~-i-~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd-~~~~~~~-~~~i 103 (706)
T 2z3z_A 28 VVGLQWMGDNYVFIEGDD-L-VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGR-GLVVLFT-QGGL 103 (706)
T ss_dssp CTTCEEETTEEEEEETTE-E-EEEC-------CEEEEHHHHHTTC-----------CCCEEEEETTT-TEEEEEE-TTEE
T ss_pred CCCCcCcCCeEEEEeCCc-E-EEECCCCcEeeEEeechhHhhhhccchhccccccccCceeEEECCC-CeEEEEE-CCEE
Confidence 445677777788888888 8 9999999873 4444433 46999999999 6666654 5999
Q ss_pred EEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCCeEEEEEcCC-----CceEEEEEecccCC-------CCCc
Q psy12614 136 NLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAAAVRVWDIHK-----GHAIHKMSLDKSSK-------FSKN 203 (708)
Q Consensus 136 ~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~i~iwd~~~-----~~~~~~~~~~~~~~-------~~~~ 203 (708)
++||+.+++.. .+..+...+.+++|+|||++|+++....|++||+.+ ++............ -.+.
T Consensus 104 ~~~d~~~~~~~---~l~~~~~~~~~~~~SpdG~~la~~~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~ 180 (706)
T 2z3z_A 104 VGFDMLARKVT---YLFDTNEETASLDFSPVGDRVAYVRNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREF 180 (706)
T ss_dssp EEEETTTTEEE---EEECCTTCCTTCEECTTSSEEEEEETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCT
T ss_pred EEEECCCCceE---EccCCcccccCCcCCCCCCEEEEEECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhc
Confidence 99999998764 344556778899999999999996444999999998 77654332221000 0000
Q ss_pred eeEEEEEEccCCE-EEEEc---------------------------------CCCcEEEEeCCCCeeEEEee--ccccCe
Q psy12614 204 TAVWCVAFCADFT-IITGD---------------------------------SGGFVRFWDGKTGVQWSDVK--THKKDI 247 (708)
Q Consensus 204 ~~v~~~~~~~~~~-l~~~~---------------------------------~dg~i~~wd~~~~~~~~~~~--~~~~~i 247 (708)
..+.+++|+|||+ |++++ .+..|++||+.+++...... .|...+
T Consensus 181 ~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~ 260 (706)
T 2z3z_A 181 GIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFL 260 (706)
T ss_dssp TCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEE
T ss_pred CCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeE
Confidence 1147899999996 66665 44679999999887655442 466789
Q ss_pred EEEEEeCCCCEEEEEecCC-----eEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEeCCEEEEEcCCC
Q psy12614 248 LALTVSEDENYLYCAGVDP-----TVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALHGNRLYSGGLDS 322 (708)
Q Consensus 248 ~~~~~s~~~~~l~~~~~dg-----~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~s~~~d~ 322 (708)
..++|+|||++|++++.++ .|++||..+ ++ ....+.. ....
T Consensus 261 ~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~--------g~--------~~~~~~~-----------------~~~~- 306 (706)
T 2z3z_A 261 TNLSWSPDENILYVAEVNRAQNECKVNAYDAET--------GR--------FVRTLFV-----------------ETDK- 306 (706)
T ss_dssp EEEEECTTSSEEEEEEECTTSCEEEEEEEETTT--------CC--------EEEEEEE-----------------EECS-
T ss_pred eeEEEECCCCEEEEEEeCCCCCeeEEEEEECCC--------Cc--------eeeEEEE-----------------ccCC-
Confidence 9999999999999887765 777787776 42 0000000 0000
Q ss_pred eEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEEEcCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecC
Q psy12614 323 YLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVN 402 (708)
Q Consensus 323 ~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (708)
..
T Consensus 307 ------------------------------------------------------------------------------~~ 308 (706)
T 2z3z_A 307 ------------------------------------------------------------------------------HY 308 (706)
T ss_dssp ------------------------------------------------------------------------------SC
T ss_pred ------------------------------------------------------------------------------Ce
Confidence 00
Q ss_pred CCceEEEEeCC--CCcEEEEEc-CCceEEEEEEecCCcceeEEeecCCcccccceeEE-EEEecCCCeEEEEecC-C---
Q psy12614 403 NATIRCSVVSN--DGKYVAYST-ESCVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTH-VLISADSTLLLAVSLN-G--- 474 (708)
Q Consensus 403 ~~~i~~~~~s~--~g~~l~~~~-d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~s~d~~~l~~~~~d-g--- 474 (708)
...+.+++|+| ||++++++. ++.++||.++.... .+.. +..+.. .+.. ++|+|||+.|++++.+ +
T Consensus 309 ~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~--~~~~---l~~~~~--~v~~~~~~spdg~~l~~~~~~~~~~~ 381 (706)
T 2z3z_A 309 VEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGR--LIRQ---VTKGEW--EVTNFAGFDPKGTRLYFESTEASPLE 381 (706)
T ss_dssp CCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSC--EEEE---CCCSSS--CEEEEEEECTTSSEEEEEESSSCTTC
T ss_pred ECccCCceeecCCCCEEEEEEccCCccEEEEEECCCC--EEEe---cCCCCe--EEEeeeEEcCCCCEEEEEecCCCCce
Confidence 01234578999 999888765 88999999984222 2333 444432 4544 7999999988766554 3
Q ss_pred c-EEEecCCCeEEEEEecCCCCCccCcceEEEEECCCCcEEEEEecC----CeEEEEECCceeeecCCCCCCceEEEE
Q psy12614 475 P-LYIIDLSSLEIKYCVDPYKSNLMSDVISLVQMSECKQYIVCADRK----SHVVIWKNGQHHASLPRYRKPSTAMAI 547 (708)
Q Consensus 475 ~-i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d----~~i~iw~~~~~~~~~~~~~~~v~~l~~ 547 (708)
. ||.++..+.+ ...+. + ...+..++|||||++|+....+ +.|++||+.+....+..+...+....+
T Consensus 382 ~~l~~~d~~~~~-~~~l~----~--~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~~~~~~~~~~~~~~~~~ 452 (706)
T 2z3z_A 382 RHFYCIDIKGGK-TKDLT----P--ESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKGSHTLLEAKNPDTGYAM 452 (706)
T ss_dssp BEEEEEETTCCC-CEESC----C--SSSEEEEEECTTSSEEEEEEECSSCSCEEEEEESSSCEEEEEECC------CC
T ss_pred EEEEEEEcCCCC-ceecc----C--CCceEEEEECCCCCEEEEEecCCCCCcEEEEEECCCCeEeeccccchhhhcCC
Confidence 2 8877654333 33333 2 4568899999999999877544 569999998543332233333433333
|
| >2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=1.4e-23 Score=231.66 Aligned_cols=313 Identities=12% Similarity=0.075 Sum_probs=221.3
Q ss_pred cEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeE-EEEEecCCC--------------CCcEEEEEEe-CCEEEEEcCCC
Q psy12614 28 VINCIACEPKSSRLAVSRADQSIEIWDISETPHV-DRVFIGDPL--------------SNSIECLTWF-NDRLFSGGLQG 91 (708)
Q Consensus 28 ~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~-~~~~~~h~~--------------~~~v~~l~~~-~~~l~s~~~d~ 91 (708)
.+..+.|. |+.+++++.+| | +||+.+++.+ ...+..+.+ ...|.+++|+ .+.++.+ .++
T Consensus 27 ~~~~~~w~--g~~~~~~~~~~-i-~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd~~~~~~-~~~ 101 (706)
T 2z3z_A 27 YVVGLQWM--GDNYVFIEGDD-L-VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGRGLVVLF-TQG 101 (706)
T ss_dssp -CTTCEEE--TTEEEEEETTE-E-EEEC-------CEEEEHHHHHTTC-----------CCCEEEEETTTTEEEEE-ETT
T ss_pred cCCCCcCc--CCeEEEEeCCc-E-EEECCCCcEeeEEeechhHhhhhccchhccccccccCceeEEECCCCeEEEE-ECC
Confidence 34557777 66777777787 8 9999998873 323332210 0369999999 6555544 469
Q ss_pred cEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccC-----CcEEEEEeccccccc---------
Q psy12614 92 FVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISD-----EGLLYEKLLDRQQGR--------- 157 (708)
Q Consensus 92 ~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~-----~~~~~~~~~~~~~~~--------- 157 (708)
.|++||+.+++... +..+...+.+++|||||++||++ .++.|++||+.+ ++.. .....+...
T Consensus 102 ~i~~~d~~~~~~~~-l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~--~~~~~~~~~~~~g~~~~~ 177 (706)
T 2z3z_A 102 GLVGFDMLARKVTY-LFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAI--AVTIDGTETLVYGQAVHQ 177 (706)
T ss_dssp EEEEEETTTTEEEE-EECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCE--ESCSCCBTTEEESSCCGG
T ss_pred EEEEEECCCCceEE-ccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcE--EeccCCCCCeEcccchhh
Confidence 99999999987654 44566789999999999999985 679999999998 7764 333333332
Q ss_pred -----EEEEEECCCCCEEEEec---------------------------------CC-eEEEEEcCCCceEEEEEecccC
Q psy12614 158 -----ILCTAWHSSGDYLVTGC---------------------------------AA-AVRVWDIHKGHAIHKMSLDKSS 198 (708)
Q Consensus 158 -----v~~~~~s~d~~~l~~~~---------------------------------~d-~i~iwd~~~~~~~~~~~~~~~~ 198 (708)
+.+++|+|||++|++++ .+ .|.+||+.+++........
T Consensus 178 ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~--- 254 (706)
T 2z3z_A 178 REFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGE--- 254 (706)
T ss_dssp GCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCS---
T ss_pred hhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCC---
Confidence 48899999999999887 44 8999999988764332211
Q ss_pred CCCCceeEEEEEEccCCE-EEEEcCCC-----cEEEEeCCCCeeEEEee-c-ccc---CeEEEEEeC--CCCEEEEEecC
Q psy12614 199 KFSKNTAVWCVAFCADFT-IITGDSGG-----FVRFWDGKTGVQWSDVK-T-HKK---DILALTVSE--DENYLYCAGVD 265 (708)
Q Consensus 199 ~~~~~~~v~~~~~~~~~~-l~~~~~dg-----~i~~wd~~~~~~~~~~~-~-~~~---~i~~~~~s~--~~~~l~~~~~d 265 (708)
.+...+.+++|+|||+ +++++.++ .|++||+.+++....+. . +.. .+..++|+| ||+++++++.|
T Consensus 255 --~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~ 332 (706)
T 2z3z_A 255 --PKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRD 332 (706)
T ss_dssp --CTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTT
T ss_pred --CCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccC
Confidence 2367899999999996 77766554 89999999984333332 2 222 246789999 99999999999
Q ss_pred CeEEEEEcc-CCcccccCCCCCCCCcceEEeEEEeccccceEE-EEEe--CCEEEEE-cCCC----eEEEEeCCCCceee
Q psy12614 266 PTVVCFQRT-RKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKS-LALH--GNRLYSG-GLDS----YLSLSYYPPKTLVK 336 (708)
Q Consensus 266 g~i~iw~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~-l~~~--~~~l~s~-~~d~----~i~iw~~~~~~~~~ 336 (708)
+.+++|.+. . ++ ....+..+...+.. ++|+ ++.|+.+ +.++ .|..|++.+.....
T Consensus 333 g~~~l~~~~~~--------~~--------~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~ 396 (706)
T 2z3z_A 333 GWNHLYLYDTT--------GR--------LIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGKTKD 396 (706)
T ss_dssp SSCEEEEEETT--------SC--------EEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCCCEE
T ss_pred CccEEEEEECC--------CC--------EEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCCcee
Confidence 999999876 3 33 45566677777876 7888 6666554 4444 67777887776665
Q ss_pred cCccCCCCceEEEEcCCcEEEEE-cC----CeEEEEEecC
Q psy12614 337 YPCTLAQSTPVSLAKDIQHVLLQ-YT----SHLELWSLGS 371 (708)
Q Consensus 337 ~~~~~~~~~~~~~s~~~~~l~~~-~~----~~i~i~~~~~ 371 (708)
+. +......++++|||+.++.. .+ ..+.+|+..+
T Consensus 397 l~-~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~ 435 (706)
T 2z3z_A 397 LT-PESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGK 435 (706)
T ss_dssp SC-CSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEESSS
T ss_pred cc-CCCceEEEEECCCCCEEEEEecCCCCCcEEEEEECCC
Confidence 55 44456689999999988864 32 4699999876
|
| >3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans} | Back alignment and structure |
|---|
Probab=99.92 E-value=2.5e-22 Score=199.78 Aligned_cols=282 Identities=10% Similarity=0.063 Sum_probs=201.1
Q ss_pred EEEcCCCCE-EEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcC-CCcEEEEECCCCeE-eEE
Q psy12614 32 IACEPKSSR-LAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGL-QGFVNEYDMRRLNI-KSS 106 (708)
Q Consensus 32 ~~~s~~~~~-la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~-d~~i~vwd~~~~~~-~~~ 106 (708)
..|.+++++ +++++.++.|.+||..+++.+. .+..+. ..+ +++|+ ++++++++. ++.|.+||+.+++. ...
T Consensus 3 ~~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~-~~~~~~--~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~ 78 (331)
T 3u4y_A 3 AMFQTTSNFGIVVEQHLRRISFFSTDTLEILN-QITLGY--DFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVA 78 (331)
T ss_dssp ----CCCCEEEEEEGGGTEEEEEETTTCCEEE-EEECCC--CEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEE
T ss_pred eeEcCCCCEEEEEecCCCeEEEEeCcccceee-eEEccC--Ccc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEe
Confidence 456666666 6667788999999999998876 555555 666 99999 776666655 89999999999987 777
Q ss_pred EeecCCceEEEEEecCCCEEEEEeCCC---cEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEe-cCC-e-EEE
Q psy12614 107 TAVTSGTCWCLSVHKKKRLLAAGTEQG---HINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTG-CAA-A-VRV 180 (708)
Q Consensus 107 ~~~~~~~v~~~~~s~~~~~la~~~~d~---~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~-~~d-~-i~i 180 (708)
+..+..+..+++|+|+|++|+++..++ .|.+||+.+++.. ..+.. .....+++|+|||++|+++ ..+ . |.+
T Consensus 79 ~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~--~~~~~-~~~~~~~~~spdg~~l~~~~~~~~~~i~~ 155 (331)
T 3u4y_A 79 IQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFI--STIPI-PYDAVGIAISPNGNGLILIDRSSANTVRR 155 (331)
T ss_dssp EEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEE--EEEEC-CTTEEEEEECTTSSCEEEEEETTTTEEEE
T ss_pred cccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeE--EEEEC-CCCccceEECCCCCEEEEEecCCCceEEE
Confidence 777776666699999999999555543 8999999998876 33433 3456899999999866655 444 7 999
Q ss_pred EEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-E-EEEcCCCcEEEEeCCCCee---EEEeeccccCeEEEEEeCC
Q psy12614 181 WDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-I-ITGDSGGFVRFWDGKTGVQ---WSDVKTHKKDILALTVSED 255 (708)
Q Consensus 181 wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l-~~~~~dg~i~~wd~~~~~~---~~~~~~~~~~i~~~~~s~~ 255 (708)
|++.....+........ .....+..++|+|||+ + +++..++.|.+||+.+++. +..+.. ...+..++|+||
T Consensus 156 ~~~~~~g~~~~~~~~~~---~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~-~~~~~~~~~spd 231 (331)
T 3u4y_A 156 FKIDADGVLFDTGQEFI---SGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGT-NNLPGTIVVSRD 231 (331)
T ss_dssp EEECTTCCEEEEEEEEE---CSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEEC-SSCCCCEEECTT
T ss_pred EEECCCCcEeecCCccc---cCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccC-CCCCceEEECCC
Confidence 99986444322210000 1134578999999995 4 4556789999999999887 777764 467789999999
Q ss_pred CCEEEEEe-cCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEecc----ccc---eEEEEEe--CCEEEE-EcCCCeE
Q psy12614 256 ENYLYCAG-VDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIH----EGD---VKSLALH--GNRLYS-GGLDSYL 324 (708)
Q Consensus 256 ~~~l~~~~-~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~----~~~---v~~l~~~--~~~l~s-~~~d~~i 324 (708)
|++|++++ .++.|.+||..+ ++ ......+..+ ... ...++|+ +++|++ +..++.|
T Consensus 232 g~~l~v~~~~~~~i~~~d~~~--------~~------~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v 297 (331)
T 3u4y_A 232 GSTVYVLTESTVDVFNFNQLS--------GT------LSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISREL 297 (331)
T ss_dssp SSEEEEECSSEEEEEEEETTT--------TE------EEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEE
T ss_pred CCEEEEEEcCCCEEEEEECCC--------Cc------eeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcE
Confidence 99887665 467899999988 53 1112222211 222 2457888 676654 5556799
Q ss_pred EEEeCCCCceeecC
Q psy12614 325 SLSYYPPKTLVKYP 338 (708)
Q Consensus 325 ~iw~~~~~~~~~~~ 338 (708)
.+||+.......+.
T Consensus 298 ~v~d~~~~~~~~~~ 311 (331)
T 3u4y_A 298 KVFTISGKVVGYVA 311 (331)
T ss_dssp EEEETTSCEEEECT
T ss_pred EEEEecCCccccee
Confidence 99999887765554
|
| >1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24 | Back alignment and structure |
|---|
Probab=99.92 E-value=1.1e-23 Score=233.64 Aligned_cols=345 Identities=12% Similarity=0.050 Sum_probs=228.1
Q ss_pred ceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccc---cEEEEEECCCCCEEEEecC---------C-eEE
Q psy12614 113 TCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQG---RILCTAWHSSGDYLVTGCA---------A-AVR 179 (708)
Q Consensus 113 ~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~---~v~~~~~s~d~~~l~~~~~---------d-~i~ 179 (708)
.+.+++|+|||+++++ +.||.|++||+.+++.. ..+..|.. .|.+++|||||++|++++. + .+.
T Consensus 18 ~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~--~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~ 94 (723)
T 1xfd_A 18 HDPEAKWISDTEFIYR-EQKGTVRLWNVETNTST--VLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYV 94 (723)
T ss_dssp CCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCE--EEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEE
T ss_pred cccccEEcCCCcEEEE-eCCCCEEEEECCCCcEE--EEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEE
Confidence 4678899999998776 78999999999999876 45555554 4899999999999999876 3 688
Q ss_pred EEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCeeEEEeeccccCe-----------
Q psy12614 180 VWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDVKTHKKDI----------- 247 (708)
Q Consensus 180 iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i----------- 247 (708)
+||+.+++. ..+.... .+...+..++|+|||+ ++.++. +.|++||+.+++.......+...+
T Consensus 95 ~~d~~~~~~-~~l~~~~----~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ 168 (723)
T 1xfd_A 95 LSKIPHGDP-QSLDPPE----VSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYE 168 (723)
T ss_dssp EEESSSCCC-EECCCTT----CCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHH
T ss_pred EEECCCCce-EeccCCc----cccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEE
Confidence 999998876 3333221 2244578899999996 666654 899999999888766655444433
Q ss_pred -------EEEEEeCCCCEEEEEecC-CeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEE
Q psy12614 248 -------LALTVSEDENYLYCAGVD-PTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYS 317 (708)
Q Consensus 248 -------~~~~~s~~~~~l~~~~~d-g~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s 317 (708)
.+++|+|||++|++++.+ +.+.+|++.. .. ..+...+..+.+. |..
T Consensus 169 ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~--------~~-------------~~~~~~~~~~~~~~~G~~--- 224 (723)
T 1xfd_A 169 EEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPT--------YT-------------GSIYPTVKPYHYPKAGSE--- 224 (723)
T ss_dssp HTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECC--------CS-------------SSSSCCCEEEECCBTTSC---
T ss_pred EEeccCcceEEECCCCCEEEEEEECCCccceEEeec--------cC-------------CcCCCcceeccCCCCCCC---
Confidence 789999999999988765 4677787754 21 0122345666665 321
Q ss_pred EcCCCeEEEEeCCCCce-eecCcc------CCCCceEEEEcCCcEEEEE-c----CCeEEEEEecCCCCCCCCCCCCCCc
Q psy12614 318 GGLDSYLSLSYYPPKTL-VKYPCT------LAQSTPVSLAKDIQHVLLQ-Y----TSHLELWSLGSAQSTDLSSHSNTTG 385 (708)
Q Consensus 318 ~~~d~~i~iw~~~~~~~-~~~~~~------~~~~~~~~~s~~~~~l~~~-~----~~~i~i~~~~~~~~~~~~~~~~~~~ 385 (708)
..+..|++||+.+... ..+..+ ......++|||||++++.. . +..|.+||+.+++
T Consensus 225 -~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~------------ 291 (723)
T 1xfd_A 225 -NPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGV------------ 291 (723)
T ss_dssp -CCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCC------------
T ss_pred -CCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCc------------
Confidence 3345899999988763 444422 2233569999999988764 2 2468999988765
Q ss_pred ccCCCCceEEEEEEecCCCce----EEEEeCCCCcEEEE--Ec-CC----ceEEEEEE--ecCCcceeEEeecCCccccc
Q psy12614 386 VPLLSFPRLIVKMSAVNNATI----RCSVVSNDGKYVAY--ST-ES----CVRLHSLD--LDGDKPQISRIKNLPAPLFK 452 (708)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~i----~~~~~s~~g~~l~~--~~-d~----~i~i~~~~--~~~~~~~~~~~~~~~~~~~~ 452 (708)
........+...+ ..++|+|||+.|+. +. ++ ...||.++ .+........ +....
T Consensus 292 --------~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~---l~~~~-- 358 (723)
T 1xfd_A 292 --------CTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQS---ITSGD-- 358 (723)
T ss_dssp --------EEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCB---SCCSS--
T ss_pred --------ceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeE---eecCC--
Confidence 2222222233333 37899999998775 33 66 45555554 2111000111 33211
Q ss_pred ceeE-EEEEecCCCeEEEEecC---Cc--EEEecCCCeEEEEEecCCCCCccCcceEEEEECCCCcEEEEEe
Q psy12614 453 SIFT-HVLISADSTLLLAVSLN---GP--LYIIDLSSLEIKYCVDPYKSNLMSDVISLVQMSECKQYIVCAD 518 (708)
Q Consensus 453 ~~i~-~~~~s~d~~~l~~~~~d---g~--i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~ 518 (708)
..+. .++|+|||+.|+..+.+ +. ||.++.........+.....+ ...+..++|||||++|+...
T Consensus 359 ~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~spdg~~l~~~~ 428 (723)
T 1xfd_A 359 WDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTVGNFNRQCLSCDLVE--NCTYFSASFSHSMDFFLLKC 428 (723)
T ss_dssp SCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECSSTTCCCBCSSTTSSS--SCCCCEEEECTTSSEEEEEC
T ss_pred eEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEeCCCCCCcceecccccC--CCCeEEEEECCCCCEEEEEc
Confidence 1222 26999999999877665 33 999976532122233221112 45688999999999988754
|
| >3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=2.3e-21 Score=194.82 Aligned_cols=269 Identities=14% Similarity=0.063 Sum_probs=209.5
Q ss_pred CCcEEEEEEcCCCCEEEEEeC-------CCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEE-EEcCCCcEEE
Q psy12614 26 PKVINCIACEPKSSRLAVSRA-------DQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLF-SGGLQGFVNE 95 (708)
Q Consensus 26 ~~~v~~~~~s~~~~~la~~~~-------dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~-s~~~d~~i~v 95 (708)
...+..++|+|++++|++++. ++.|.+||..+++.+. .+... ..+..++|+ +++++ +...++.|.+
T Consensus 40 ~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~-~~~~~---~~~~~~~~s~dg~~l~v~~~~~~~v~~ 115 (353)
T 3vgz_A 40 GKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQ-AIHND---LKPFGATINNTTQTLWFGNTVNSAVTA 115 (353)
T ss_dssp ESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEE-EEEES---SCCCSEEEETTTTEEEEEETTTTEEEE
T ss_pred ccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEE-EEecC---CCcceEEECCCCCEEEEEecCCCEEEE
Confidence 456889999999999988774 4689999999998776 44433 347788999 67554 5566899999
Q ss_pred EECCCCeEeEEEeecCCc---------eEEEEEecCCCEEEEEe--CCCcEEEEEccCCcEEEEEecccccccEEEEEEC
Q psy12614 96 YDMRRLNIKSSTAVTSGT---------CWCLSVHKKKRLLAAGT--EQGHINLFQISDEGLLYEKLLDRQQGRILCTAWH 164 (708)
Q Consensus 96 wd~~~~~~~~~~~~~~~~---------v~~~~~s~~~~~la~~~--~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s 164 (708)
||..+++.+..+..+... +.+++|+|+++++++++ .++.|.+||..+++.. ..+..+...+..++|+
T Consensus 116 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~--~~~~~~~~~~~~~~~s 193 (353)
T 3vgz_A 116 IDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLK--TAIQNTGKMSTGLALD 193 (353)
T ss_dssp EETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEE--EEECCCCTTCCCCEEE
T ss_pred EeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceE--EEecCCCCccceEEEC
Confidence 999999988888765432 78999999999888776 4788999999999886 4555455567899999
Q ss_pred CCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EE-EEcCCCcEEEEeCCCCeeEEEee
Q psy12614 165 SSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-II-TGDSGGFVRFWDGKTGVQWSDVK 241 (708)
Q Consensus 165 ~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~-~~~~dg~i~~wd~~~~~~~~~~~ 241 (708)
|++++|++++.+ .|.+||+.+++.+..+...... +...+..++|+|+|+ ++ +...++.|.+||..+++.+..+.
T Consensus 194 ~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~---~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~ 270 (353)
T 3vgz_A 194 SEGKRLYTTNADGELITIDTADNKILSRKKLLDDG---KEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVA 270 (353)
T ss_dssp TTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSS---SCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEE
T ss_pred CCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCC---CCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEE
Confidence 999999999988 9999999999998888764322 256788999999995 44 44456999999999999888877
Q ss_pred ccccCeEEEEEeCCCCEEEEEe-cCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEEE
Q psy12614 242 THKKDILALTVSEDENYLYCAG-VDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSG 318 (708)
Q Consensus 242 ~~~~~i~~~~~s~~~~~l~~~~-~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~ 318 (708)
... ...++|+|+++++++++ .++.|.+||..+ ++ ....+.. ...+.+++|+ ++.|+.+
T Consensus 271 ~~~--~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~--------~~--------~~~~~~~-~~~~~~~~~s~dg~~l~v~ 331 (353)
T 3vgz_A 271 APE--SLAVLFNPARNEAYVTHRQAGKVSVIDAKS--------YK--------VVKTFDT-PTHPNSLALSADGKTLYVS 331 (353)
T ss_dssp CSS--CCCEEEETTTTEEEEEETTTTEEEEEETTT--------TE--------EEEEEEC-CSEEEEEEECTTSCEEEEE
T ss_pred cCC--CceEEECCCCCEEEEEECCCCeEEEEECCC--------Ce--------EEEEEec-CCCCCeEEEcCCCCEEEEE
Confidence 543 25799999999776666 689999999988 54 3333333 3467888998 6766666
Q ss_pred cCCC
Q psy12614 319 GLDS 322 (708)
Q Consensus 319 ~~d~ 322 (708)
..++
T Consensus 332 ~~~~ 335 (353)
T 3vgz_A 332 VKQK 335 (353)
T ss_dssp EECC
T ss_pred Eccc
Confidence 5543
|
| >1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1 | Back alignment and structure |
|---|
Probab=99.91 E-value=2.4e-21 Score=193.76 Aligned_cols=294 Identities=12% Similarity=0.163 Sum_probs=197.7
Q ss_pred CEEE-EEeCCCcEEEEeCC-CCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCC-CcEEEEECC--CCe--EeEEEee
Q psy12614 39 SRLA-VSRADQSIEIWDIS-ETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQ-GFVNEYDMR--RLN--IKSSTAV 109 (708)
Q Consensus 39 ~~la-~~~~dg~v~iwd~~-~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d-~~i~vwd~~--~~~--~~~~~~~ 109 (708)
++++ +++.++.|.+||+. ++.........+. ..+.+++|+ +++|++++.+ +.|.+|++. +++ .+..+..
T Consensus 5 ~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 82 (343)
T 1ri6_A 5 QTVYIASPESQQIHVWNLNHEGALTLTQVVDVP--GQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESAL 82 (343)
T ss_dssp EEEEEEEGGGTEEEEEEECTTSCEEEEEEEECS--SCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEC
T ss_pred EEEEEeCCCCCeEEEEEECCCCcEEEeeeEecC--CCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeecccccc
Confidence 3444 44779999999996 3433222334566 789999999 8888888876 999999998 554 3344544
Q ss_pred cCCceEEEEEecCCCEEEEEeC-CCcEEEEEccCCcEE-EEEecccccccEEEEEECCCCCEEEEec-CC-eEEEEEcCC
Q psy12614 110 TSGTCWCLSVHKKKRLLAAGTE-QGHINLFQISDEGLL-YEKLLDRQQGRILCTAWHSSGDYLVTGC-AA-AVRVWDIHK 185 (708)
Q Consensus 110 ~~~~v~~~~~s~~~~~la~~~~-d~~i~iwd~~~~~~~-~~~~~~~~~~~v~~~~~s~d~~~l~~~~-~d-~i~iwd~~~ 185 (708)
+. .+..++|+|++++|++++. ++.|.+||+..+... ....+.. ...+.+++|+|++++|++++ .+ .|.+||+.+
T Consensus 83 ~~-~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~ 160 (343)
T 1ri6_A 83 PG-SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEG-LDGCHSANISPDNRTLWVPALKQDRICLFTVSD 160 (343)
T ss_dssp SS-CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECC-CTTBCCCEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred CC-CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccC-CCCceEEEECCCCCEEEEecCCCCEEEEEEecC
Confidence 43 7899999999998877665 888999999533221 1133333 34588999999999888877 66 999999987
Q ss_pred -CceEEEE--EecccCCCCCceeEEEEEEccCCE-EE-EEcCCCcEEEEeCCC--Cee--EEEee---cc---ccCeEEE
Q psy12614 186 -GHAIHKM--SLDKSSKFSKNTAVWCVAFCADFT-II-TGDSGGFVRFWDGKT--GVQ--WSDVK---TH---KKDILAL 250 (708)
Q Consensus 186 -~~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~-l~-~~~~dg~i~~wd~~~--~~~--~~~~~---~~---~~~i~~~ 250 (708)
++..... .... .....+..++|+|+++ ++ ++..++.|.+|++.. ++. ...+. .. ...+..+
T Consensus 161 ~~~~~~~~~~~~~~----~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i 236 (343)
T 1ri6_A 161 DGHLVAQDPAEVTT----VEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADI 236 (343)
T ss_dssp TSCEEEEEEEEEEC----STTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEE
T ss_pred CCceeeeccccccc----CCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccce
Confidence 6543322 1110 1145688899999996 54 555789999999953 432 22222 11 2356789
Q ss_pred EEeCCCCEEEEEe-cCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEEEc-CCCeEEE
Q psy12614 251 TVSEDENYLYCAG-VDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSGG-LDSYLSL 326 (708)
Q Consensus 251 ~~s~~~~~l~~~~-~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~~-~d~~i~i 326 (708)
+|+|++++|+++. .++.|.+|++.. .. ........+..+.. +.+++|+ +++|++++ .++.+.+
T Consensus 237 ~~s~dg~~l~v~~~~~~~i~v~d~~~--------~~----~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~v~v 303 (343)
T 1ri6_A 237 HITPDGRHLYACDRTASLITVFSVSE--------DG----SVLSKEGFQPTETQ-PRGFNVDHSGKYLIAAGQKSHHISV 303 (343)
T ss_dssp EECTTSSEEEEEETTTTEEEEEEECT--------TS----CCEEEEEEEECSSS-CCCEEECTTSSEEEEECTTTCEEEE
T ss_pred EECCCCCEEEEEecCCCEEEEEEEcC--------CC----CceEEeeeecCCCc-cceEEECCCCCEEEEecCCCCeEEE
Confidence 9999999887554 789999999983 11 11223334444443 8889998 77777777 6899999
Q ss_pred EeCC--CCceeecC--ccCCCCceEEEEcCC
Q psy12614 327 SYYP--PKTLVKYP--CTLAQSTPVSLAKDI 353 (708)
Q Consensus 327 w~~~--~~~~~~~~--~~~~~~~~~~~s~~~ 353 (708)
|+++ ++.+..+. .....+..+++.++.
T Consensus 304 ~~~d~~~g~~~~~~~~~~g~~p~~i~~~~~~ 334 (343)
T 1ri6_A 304 YEIVGEQGLLHEKGRYAVGQGPMWVVVNAHE 334 (343)
T ss_dssp EEEETTTTEEEEEEEEECSSSCCEEEEEEEC
T ss_pred EEEcCCCceeeEccccccCCCCeeEEEEccc
Confidence 9554 44433222 022345667776654
|
| >3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans} | Back alignment and structure |
|---|
Probab=99.90 E-value=5.9e-21 Score=189.82 Aligned_cols=267 Identities=10% Similarity=0.076 Sum_probs=196.5
Q ss_pred CCEEEEEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeC-CCcEEEEEccCCcE-EEEEecccccccE
Q psy12614 81 NDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTE-QGHINLFQISDEGL-LYEKLLDRQQGRI 158 (708)
Q Consensus 81 ~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~-d~~i~iwd~~~~~~-~~~~~~~~~~~~v 158 (708)
+..+++.+.++.|.+||+.+++....+..+...+ +++|+|+|+++++++. ++.|.+||..+++. . ..+..+..+.
T Consensus 10 ~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~--~~~~~~~~~~ 86 (331)
T 3u4y_A 10 NFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKV--VAIQEGQSSM 86 (331)
T ss_dssp CEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEE--EEEEECSSCC
T ss_pred CEEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeE--EecccCCCCc
Confidence 3346788889999999999999988888777777 9999999997777666 88999999999886 4 4555555555
Q ss_pred EEEEECCCCCEEEEecCC----eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EE-EEcCCCc-EEEEeC
Q psy12614 159 LCTAWHSSGDYLVTGCAA----AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-II-TGDSGGF-VRFWDG 231 (708)
Q Consensus 159 ~~~~~s~d~~~l~~~~~d----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~-~~~~dg~-i~~wd~ 231 (708)
.+++|+|+|++|+++..+ .|.+||+.+++.+..+... ....+++|+|||+ ++ +...++. |.+|++
T Consensus 87 ~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~--------~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~ 158 (331)
T 3u4y_A 87 ADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIP--------YDAVGIAISPNGNGLILIDRSSANTVRRFKI 158 (331)
T ss_dssp CCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECC--------TTEEEEEECTTSSCEEEEEETTTTEEEEEEE
T ss_pred cceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECC--------CCccceEECCCCCEEEEEecCCCceEEEEEE
Confidence 559999999999976665 7999999999988876543 3458999999995 54 4455688 999998
Q ss_pred CCCeeE----EEeeccccCeEEEEEeCCCCEEEEEe-cCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceE
Q psy12614 232 KTGVQW----SDVKTHKKDILALTVSEDENYLYCAG-VDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVK 306 (708)
Q Consensus 232 ~~~~~~----~~~~~~~~~i~~~~~s~~~~~l~~~~-~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~ 306 (708)
.....+ ............++|+|+|+++++++ .++.|.+||+.+ ++. ......+. ....+.
T Consensus 159 ~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~--------~~~-----~~~~~~~~-~~~~~~ 224 (331)
T 3u4y_A 159 DADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQN--------PEN-----ITLLNAVG-TNNLPG 224 (331)
T ss_dssp CTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSS--------TTS-----CEEEEEEE-CSSCCC
T ss_pred CCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCC--------Ccc-----cceeeecc-CCCCCc
Confidence 754332 11223445689999999999766555 588999999988 540 00133333 346678
Q ss_pred EEEEe--CCEEEEEc-CCCeEEEEeCCCCceeec---Cc-------cCCCCceEEEEcCCcEEEEE--cCCeEEEEEecC
Q psy12614 307 SLALH--GNRLYSGG-LDSYLSLSYYPPKTLVKY---PC-------TLAQSTPVSLAKDIQHVLLQ--YTSHLELWSLGS 371 (708)
Q Consensus 307 ~l~~~--~~~l~s~~-~d~~i~iw~~~~~~~~~~---~~-------~~~~~~~~~~s~~~~~l~~~--~~~~i~i~~~~~ 371 (708)
.++|+ +++++.+. .++.|.+||+.+..+..+ .. +......++++|+++.++++ .++.+.+|++..
T Consensus 225 ~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~ 304 (331)
T 3u4y_A 225 TIVVSRDGSTVYVLTESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISG 304 (331)
T ss_dssp CEEECTTSSEEEEECSSEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTS
T ss_pred eEEECCCCCEEEEEEcCCCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecC
Confidence 88998 77665554 578899999998765211 10 11112447999999988653 456899999986
Q ss_pred C
Q psy12614 372 A 372 (708)
Q Consensus 372 ~ 372 (708)
.
T Consensus 305 ~ 305 (331)
T 3u4y_A 305 K 305 (331)
T ss_dssp C
T ss_pred C
Confidence 3
|
| >1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1 | Back alignment and structure |
|---|
Probab=99.90 E-value=7.2e-21 Score=190.31 Aligned_cols=246 Identities=14% Similarity=0.187 Sum_probs=178.3
Q ss_pred CCCCcEEEEEEcCCCCEEEEEeCC-CcEEEEeCC--CCCeEE-EEEecCCCCCcEEEEEEe--CCEEEEEc-CCCcEEEE
Q psy12614 24 PEPKVINCIACEPKSSRLAVSRAD-QSIEIWDIS--ETPHVD-RVFIGDPLSNSIECLTWF--NDRLFSGG-LQGFVNEY 96 (708)
Q Consensus 24 ~h~~~v~~~~~s~~~~~la~~~~d-g~v~iwd~~--~~~~~~-~~~~~h~~~~~v~~l~~~--~~~l~s~~-~d~~i~vw 96 (708)
.|...+.+++|+|+|++|++++.+ +.|.+|++. ++.... ..+.. . ..+..++|+ +++|++++ .++.|.+|
T Consensus 35 ~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~s~dg~~l~~~~~~~~~i~~~ 111 (343)
T 1ri6_A 35 DVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESAL-P--GSLTHISTDHQGQFVFVGSYNAGNVSVT 111 (343)
T ss_dssp ECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEC-S--SCCSEEEECTTSSEEEEEETTTTEEEEE
T ss_pred ecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeecccccc-C--CCCcEEEEcCCCCEEEEEecCCCeEEEE
Confidence 467789999999999999998876 899999998 555432 13333 3 478899999 77776665 58899999
Q ss_pred ECC---CCeEeEEEeecCCceEEEEEecCCCEEEEEe-CCCcEEEEEccC-CcEEEEE--eccc-ccccEEEEEECCCCC
Q psy12614 97 DMR---RLNIKSSTAVTSGTCWCLSVHKKKRLLAAGT-EQGHINLFQISD-EGLLYEK--LLDR-QQGRILCTAWHSSGD 168 (708)
Q Consensus 97 d~~---~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~-~d~~i~iwd~~~-~~~~~~~--~~~~-~~~~v~~~~~s~d~~ 168 (708)
|+. +++....+..+ ..+.+++|+|+++++++++ .++.|.+||+.+ ++..... .+.. ....+..++|+|+++
T Consensus 112 d~~~~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~ 190 (343)
T 1ri6_A 112 RLEDGLPVGVVDVVEGL-DGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQ 190 (343)
T ss_dssp EEETTEEEEEEEEECCC-TTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSS
T ss_pred ECCCCccccccccccCC-CCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCC
Confidence 994 33444444443 4688999999999888887 799999999987 6554222 2222 235788999999999
Q ss_pred EEEEec-CC-eEEEEEcCC--Cce--EEEEEecccCCCCCceeEEEEEEccCCE-EE-EEcCCCcEEEEeCC--C--Cee
Q psy12614 169 YLVTGC-AA-AVRVWDIHK--GHA--IHKMSLDKSSKFSKNTAVWCVAFCADFT-II-TGDSGGFVRFWDGK--T--GVQ 236 (708)
Q Consensus 169 ~l~~~~-~d-~i~iwd~~~--~~~--~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~-~~~~dg~i~~wd~~--~--~~~ 236 (708)
+|++++ .+ .|.+|++.. ++. ..........+ .....+..++|+|+|+ ++ +...++.|.+||+. + .+.
T Consensus 191 ~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~ 269 (343)
T 1ri6_A 191 YAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENF-SDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSK 269 (343)
T ss_dssp EEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTC-CSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEE
T ss_pred EEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccc-cccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEE
Confidence 876655 56 999999953 443 22222111111 1234677899999995 44 56678999999998 2 344
Q ss_pred EEEeeccccCeEEEEEeCCCCEEEEEe-cCCeEEEEEccC
Q psy12614 237 WSDVKTHKKDILALTVSEDENYLYCAG-VDPTVVCFQRTR 275 (708)
Q Consensus 237 ~~~~~~~~~~i~~~~~s~~~~~l~~~~-~dg~i~iw~~~~ 275 (708)
+..+..+.. +..++|+|++++|++++ .++.+.+|++..
T Consensus 270 ~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~ 308 (343)
T 1ri6_A 270 EGFQPTETQ-PRGFNVDHSGKYLIAAGQKSHHISVYEIVG 308 (343)
T ss_dssp EEEEECSSS-CCCEEECTTSSEEEEECTTTCEEEEEEEET
T ss_pred eeeecCCCc-cceEEECCCCCEEEEecCCCCeEEEEEEcC
Confidence 555554444 88999999999998888 579999996653
|
| >2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=99.89 E-value=7.5e-22 Score=192.93 Aligned_cols=233 Identities=9% Similarity=0.089 Sum_probs=178.5
Q ss_pred eeeccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCC-CCeEEEEEecCCCCCcEEEEEEe--CCEEEEEc--CCCcE
Q psy12614 19 IKFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISE-TPHVDRVFIGDPLSNSIECLTWF--NDRLFSGG--LQGFV 93 (708)
Q Consensus 19 ~~~~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~-~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~--~d~~i 93 (708)
...+..|...|.+++|+|+|++||+++ ++.|.+||+.+ ++... ...++. ...+.+++|+ +++|++++ .++..
T Consensus 34 ~~~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~-~~~~~~-~~~~~~~~~spdg~~l~~~~~~~~~~~ 110 (297)
T 2ojh_A 34 MRVVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEK-VDTGFA-TICNNDHGISPDGALYAISDKVEFGKS 110 (297)
T ss_dssp EEEEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEE-CCCTTC-CCBCSCCEECTTSSEEEEEECTTTSSC
T ss_pred eeeeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceE-eccccc-cccccceEECCCCCEEEEEEeCCCCcc
Confidence 444566899999999999999999987 78999999998 77654 555553 3788999999 88999888 33455
Q ss_pred EEE--ECCCCeEeEEEeecCCceEEEEEecCCCEEE-EEeCCCcEEEEEcc--CCcEEEEEecccccccEEEEEECCCCC
Q psy12614 94 NEY--DMRRLNIKSSTAVTSGTCWCLSVHKKKRLLA-AGTEQGHINLFQIS--DEGLLYEKLLDRQQGRILCTAWHSSGD 168 (708)
Q Consensus 94 ~vw--d~~~~~~~~~~~~~~~~v~~~~~s~~~~~la-~~~~d~~i~iwd~~--~~~~~~~~~~~~~~~~v~~~~~s~d~~ 168 (708)
.+| +..+++ ...+..+ ..+..++|+||+++|+ ++..++.+++|++. +++. ..+..+...+.+++|+|+++
T Consensus 111 ~l~~~~~~~~~-~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~---~~~~~~~~~~~~~~~s~dg~ 185 (297)
T 2ojh_A 111 AIYLLPSTGGT-PRLMTKN-LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVE---TRLTHGEGRNDGPDYSPDGR 185 (297)
T ss_dssp EEEEEETTCCC-CEECCSS-SSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCE---EECCCSSSCEEEEEECTTSS
T ss_pred eEEEEECCCCc-eEEeecC-CCccceEECCCCCEEEEEECCCCceEEEEEECCCCcc---eEcccCCCccccceECCCCC
Confidence 555 555554 3344443 3489999999999887 67789999999864 4444 45667788899999999999
Q ss_pred EEEEecC-C-eEEEEEcC-CCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCC-----------CcEEEEeCCC
Q psy12614 169 YLVTGCA-A-AVRVWDIH-KGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSG-----------GFVRFWDGKT 233 (708)
Q Consensus 169 ~l~~~~~-d-~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~d-----------g~i~~wd~~~ 233 (708)
+|++++. + .+.+|++. .+.....+.. +...+.+++|+|+|+ +++++.+ +.|++||+.+
T Consensus 186 ~l~~~~~~~~~~~i~~~~~~~~~~~~~~~-------~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~ 258 (297)
T 2ojh_A 186 WIYFNSSRTGQMQIWRVRVDGSSVERITD-------SAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDG 258 (297)
T ss_dssp EEEEEECTTSSCEEEEEETTSSCEEECCC-------CSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTS
T ss_pred EEEEEecCCCCccEEEECCCCCCcEEEec-------CCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCC
Confidence 8887664 6 88888876 4555554432 267899999999996 6666554 5699999988
Q ss_pred Cee--EEEeeccccCeEEEEEeCCCCEEEEEecCC
Q psy12614 234 GVQ--WSDVKTHKKDILALTVSEDENYLYCAGVDP 266 (708)
Q Consensus 234 ~~~--~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg 266 (708)
++. +..+.+|...+.+++|+|++++|++++.+.
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 259 GNVETLFDLFGGQGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp CSCEEEEEEEESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred CCceeeeccCCCCcccccceECCCCCEEEEEEecc
Confidence 765 444557888999999999999999887654
|
| >1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B* | Back alignment and structure |
|---|
Probab=99.88 E-value=2.5e-20 Score=185.88 Aligned_cols=264 Identities=12% Similarity=0.052 Sum_probs=199.1
Q ss_pred CEEEEEcCCCcEEEEECCCCeEeEEEeecCC--ceEEEEEecCCCEEEE-EeCCCcEEEEEccCCcEEEEEeccc---cc
Q psy12614 82 DRLFSGGLQGFVNEYDMRRLNIKSSTAVTSG--TCWCLSVHKKKRLLAA-GTEQGHINLFQISDEGLLYEKLLDR---QQ 155 (708)
Q Consensus 82 ~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~--~v~~~~~s~~~~~la~-~~~d~~i~iwd~~~~~~~~~~~~~~---~~ 155 (708)
++|++++.++.|.+||+.+++.+..+..... .+..++|+|+++++++ +..++.|.+||+.+++......... +.
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~ 81 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERV 81 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEE
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCccccc
Confidence 4788999999999999999998888764332 5889999999987654 4557899999999988763323222 12
Q ss_pred ccEEEEEECCCCCEEEEec------------CC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEc
Q psy12614 156 GRILCTAWHSSGDYLVTGC------------AA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGD 221 (708)
Q Consensus 156 ~~v~~~~~s~d~~~l~~~~------------~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~ 221 (708)
..+..++|+|||++|++++ .+ .|.+||+.+++.+..+... ..+.+++|+|||+ ++++
T Consensus 82 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~--------~~~~~~~~s~dg~~l~~~- 152 (337)
T 1pby_B 82 KSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAP--------RQITMLAWARDGSKLYGL- 152 (337)
T ss_dssp ECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECC--------SSCCCEEECTTSSCEEEE-
T ss_pred ccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCC--------CCcceeEECCCCCEEEEe-
Confidence 3567899999999998885 46 9999999998888777542 3467889999996 6666
Q ss_pred CCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEecCC------------------------eEEEEEccCCc
Q psy12614 222 SGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDP------------------------TVVCFQRTRKP 277 (708)
Q Consensus 222 ~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg------------------------~i~iw~~~~~~ 277 (708)
++.|.+||+.+++.+..+..+.. ...+.|+|+++.++..+..+ .|.+||..+
T Consensus 153 -~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~-- 228 (337)
T 1pby_B 153 -GRDLHVMDPEAGTLVEDKPIQSW-EAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLET-- 228 (337)
T ss_dssp -SSSEEEEETTTTEEEEEECSTTT-TTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTT--
T ss_pred -CCeEEEEECCCCcEeeeeecccc-CCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCC--
Confidence 68999999999988877764431 11337899998776554332 468899888
Q ss_pred ccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEEEcCCCeEEEEeCCCCceeecCccCCCCceEEEEcCCcE
Q psy12614 278 QVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQH 355 (708)
Q Consensus 278 ~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~ 355 (708)
++ . ....+..+...+.+++|+ +++++++ ++.|.+||+.+...............++++|+|+.
T Consensus 229 ------~~------~-~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~ 293 (337)
T 1pby_B 229 ------GE------M-AMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPLPHSYYSVNVSTDGST 293 (337)
T ss_dssp ------CC------E-EEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEECSSCCCEEEECTTSCE
T ss_pred ------CC------c-eEeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceecCCCceeeEEECCCCCE
Confidence 54 1 133345566678889999 7788877 79999999988764433323346678999999998
Q ss_pred EEEE-cCCeEEEEEecCCC
Q psy12614 356 VLLQ-YTSHLELWSLGSAQ 373 (708)
Q Consensus 356 l~~~-~~~~i~i~~~~~~~ 373 (708)
++++ .++.|.+||+.+++
T Consensus 294 l~~~~~~~~i~v~d~~~~~ 312 (337)
T 1pby_B 294 VWLGGALGDLAAYDAETLE 312 (337)
T ss_dssp EEEESBSSEEEEEETTTCC
T ss_pred EEEEcCCCcEEEEECcCCc
Confidence 7775 77899999998866
|
| >2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=99.88 E-value=3.9e-21 Score=187.79 Aligned_cols=248 Identities=13% Similarity=0.157 Sum_probs=188.6
Q ss_pred EeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECCC-CeEeEEEeec-CCceEEEEE
Q psy12614 44 SRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMRR-LNIKSSTAVT-SGTCWCLSV 119 (708)
Q Consensus 44 ~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~-~~~~~~~~~~-~~~v~~~~~ 119 (708)
++.++.|.+||+.+++.. .+..|. ..|.+++|+ +++|++++ ++.|.+||+.+ ++.......+ ...+.+++|
T Consensus 18 ~~~~~~i~~~d~~~~~~~--~~~~~~--~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 92 (297)
T 2ojh_A 18 GSMRSSIEIFNIRTRKMR--VVWQTP--ELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGI 92 (297)
T ss_dssp CCCCEEEEEEETTTTEEE--EEEEES--SCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEE
T ss_pred CCcceeEEEEeCCCCcee--eeccCC--cceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEE
Confidence 457889999999988764 456677 899999999 88888876 88999999999 8877666655 378899999
Q ss_pred ecCCCEEEEEeC--CCcEEEE--EccCCcEEEEEecccccccEEEEEECCCCCEEE-EecCC-eEEEEEcC--CCceEEE
Q psy12614 120 HKKKRLLAAGTE--QGHINLF--QISDEGLLYEKLLDRQQGRILCTAWHSSGDYLV-TGCAA-AVRVWDIH--KGHAIHK 191 (708)
Q Consensus 120 s~~~~~la~~~~--d~~i~iw--d~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~-~~~~d-~i~iwd~~--~~~~~~~ 191 (708)
+|++++|++++. ++...+| +..++.. ..+..+. .+..++|+||+++|+ +++.+ .+.+|++. +++. ..
T Consensus 93 spdg~~l~~~~~~~~~~~~l~~~~~~~~~~---~~~~~~~-~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~-~~ 167 (297)
T 2ojh_A 93 SPDGALYAISDKVEFGKSAIYLLPSTGGTP---RLMTKNL-PSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVE-TR 167 (297)
T ss_dssp CTTSSEEEEEECTTTSSCEEEEEETTCCCC---EECCSSS-SEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCE-EE
T ss_pred CCCCCEEEEEEeCCCCcceEEEEECCCCce---EEeecCC-CccceEECCCCCEEEEEECCCCceEEEEEECCCCcc-eE
Confidence 999999999983 3445555 5555554 3344333 488999999999887 66677 88888864 3333 33
Q ss_pred EEecccCCCCCceeEEEEEEccCCE-EEEEc-CCCcEEEEeCC-CCeeEEEeeccccCeEEEEEeCCCCEEEEEecC---
Q psy12614 192 MSLDKSSKFSKNTAVWCVAFCADFT-IITGD-SGGFVRFWDGK-TGVQWSDVKTHKKDILALTVSEDENYLYCAGVD--- 265 (708)
Q Consensus 192 ~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~-~dg~i~~wd~~-~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d--- 265 (708)
+. .+...+.+++|+|+|+ +++++ .++.+.+|++. .+..+..+..+...+..++|+|++++|++++.+
T Consensus 168 ~~-------~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~ 240 (297)
T 2ojh_A 168 LT-------HGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADV 240 (297)
T ss_dssp CC-------CSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTC
T ss_pred cc-------cCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCC
Confidence 32 2267789999999996 55444 58899999876 556677777788889999999999999988765
Q ss_pred --------CeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEEEcCCC
Q psy12614 266 --------PTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSGGLDS 322 (708)
Q Consensus 266 --------g~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~~~d~ 322 (708)
+.|++||+.+ ++ ......+..|...+..++|+ ++.|++++.+.
T Consensus 241 ~~~~~~~~~~l~~~d~~~--------~~------~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 241 FDHPRDLDVRVQLMDMDG--------GN------VETLFDLFGGQGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp CSCCSSEEEEEEEEETTS--------CS------CEEEEEEEESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred CcccccCceEEEEEecCC--------CC------ceeeeccCCCCcccccceECCCCCEEEEEEecc
Confidence 5699999987 53 22344455788889999998 78888776654
|
| >3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=5.6e-20 Score=184.62 Aligned_cols=260 Identities=10% Similarity=0.043 Sum_probs=199.6
Q ss_pred CcEEEEEEe--CCEEEEEcC-------CCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEE-eCCCcEEEEEcc
Q psy12614 72 NSIECLTWF--NDRLFSGGL-------QGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAG-TEQGHINLFQIS 141 (708)
Q Consensus 72 ~~v~~l~~~--~~~l~s~~~-------d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~-~~d~~i~iwd~~ 141 (708)
..+..++|+ ++++++++. ++.|.+||..+++.+..+... ..+..++|+|+|++++++ ..++.|.+||..
T Consensus 41 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~ 119 (353)
T 3vgz_A 41 KGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHND-LKPFGATINNTTQTLWFGNTVNSAVTAIDAK 119 (353)
T ss_dssp SSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEES-SCCCSEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred cCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecC-CCcceEEECCCCCEEEEEecCCCEEEEEeCC
Confidence 568899999 778887764 568999999999988887754 457889999999966655 447999999999
Q ss_pred CCcEEEEEecccccc---------cEEEEEECCCCCEEEEec--CC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEE
Q psy12614 142 DEGLLYEKLLDRQQG---------RILCTAWHSSGDYLVTGC--AA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCV 209 (708)
Q Consensus 142 ~~~~~~~~~~~~~~~---------~v~~~~~s~d~~~l~~~~--~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~ 209 (708)
+++... .+..+.. .+.+++|+|+++++++++ .+ .|.+||..+++.+..+... ...+.++
T Consensus 120 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~-------~~~~~~~ 190 (353)
T 3vgz_A 120 TGEVKG--RLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNT-------GKMSTGL 190 (353)
T ss_dssp TCCEEE--EEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCC-------CTTCCCC
T ss_pred CCeeEE--EEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCC-------CCccceE
Confidence 998863 3333221 278899999999888776 35 8999999999988877522 3346789
Q ss_pred EEccCCE-EEEEcCCCcEEEEeCCCCeeEEEeec----cccCeEEEEEeCCCCEEEEEecC-CeEEEEEccCCcccccCC
Q psy12614 210 AFCADFT-IITGDSGGFVRFWDGKTGVQWSDVKT----HKKDILALTVSEDENYLYCAGVD-PTVVCFQRTRKPQVCSTS 283 (708)
Q Consensus 210 ~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~~~----~~~~i~~~~~s~~~~~l~~~~~d-g~i~iw~~~~~~~~~~~~ 283 (708)
+|+|+|+ +++++.++.|.+||..+++.+..+.. +...+..++|+|+++++++++.+ +.|.+||..+
T Consensus 191 ~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~-------- 262 (353)
T 3vgz_A 191 ALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRN-------- 262 (353)
T ss_dssp EEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTT--------
T ss_pred EECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCC--------
Confidence 9999995 88888899999999999998877764 45578889999999988777654 8999999988
Q ss_pred CCCCCCcceEEeEEEeccccceEEEEEe--CCEE-EEEcCCCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEEE
Q psy12614 284 GPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRL-YSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQ 359 (708)
Q Consensus 284 g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l-~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~ 359 (708)
++ ....+.... ...++|+ ++.+ ++...++.|.+||..+............+..++++|+|++++++
T Consensus 263 ~~--------~~~~~~~~~--~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~ 331 (353)
T 3vgz_A 263 GN--------ILAKVAAPE--SLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTPTHPNSLALSADGKTLYVS 331 (353)
T ss_dssp CC--------EEEEEECSS--CCCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEEECCSEEEEEEECTTSCEEEEE
T ss_pred Cc--------EEEEEEcCC--CceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEEecCCCCCeEEEcCCCCEEEEE
Confidence 65 333333322 2567887 6644 45557999999999887754433233456789999999976654
|
| >1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.88 E-value=8.1e-22 Score=218.06 Aligned_cols=316 Identities=11% Similarity=0.031 Sum_probs=216.6
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCC---cEEEEEEe--CCEEEEEcC---------CCcEEEE
Q psy12614 31 CIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSN---SIECLTWF--NDRLFSGGL---------QGFVNEY 96 (708)
Q Consensus 31 ~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~---~v~~l~~~--~~~l~s~~~---------d~~i~vw 96 (708)
.++|+|||++++++ .|+.|.+||+.+++... .+.+|. . .+.+++|+ |++|++++. ++.|++|
T Consensus 20 ~~~~s~dg~~~~~~-~d~~i~~~~~~~g~~~~-~~~~~~--~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~ 95 (719)
T 1z68_A 20 FPNWISGQEYLHQS-ADNNIVLYNIETGQSYT-ILSNRT--MKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIY 95 (719)
T ss_dssp CCEESSSSEEEEEC-TTSCEEEEESSSCCEEE-EECHHH--HHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEE
T ss_pred ccEECCCCeEEEEc-CCCCEEEEEcCCCcEEE-EEcccc--ccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEE
Confidence 78999999766554 69999999999988754 666554 3 38999999 899988876 7899999
Q ss_pred ECCCCeEe--EEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccE----------------
Q psy12614 97 DMRRLNIK--SSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRI---------------- 158 (708)
Q Consensus 97 d~~~~~~~--~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v---------------- 158 (708)
|+.+++.+ ..+ ...+..++|||||+.||++. ++.|++||+.+++... ....++...|
T Consensus 96 d~~~g~~~~~~~l---~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~-l~~~~~~~~v~~g~~~~v~~ee~~~~ 170 (719)
T 1z68_A 96 DLSNGEFVRGNEL---PRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQ-ITFNGRENKIFNGIPDWVYEEEMLAT 170 (719)
T ss_dssp ETTTTEECCSSCC---CSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEE-CCCCCBTTTEEESSCCHHHHHHTTCS
T ss_pred ECCCCccccceec---CcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEE-EecCCCcCCeEcccccceeeeecccC
Confidence 99998873 222 25688999999999999975 7899999999887642 1223333323
Q ss_pred -EEEEECCCCCEEEEecCC-----------------------------------eEEEEEcCCCceE--EEEEecccCCC
Q psy12614 159 -LCTAWHSSGDYLVTGCAA-----------------------------------AVRVWDIHKGHAI--HKMSLDKSSKF 200 (708)
Q Consensus 159 -~~~~~s~d~~~l~~~~~d-----------------------------------~i~iwd~~~~~~~--~~~~~~~~~~~ 200 (708)
.+++|||||++|++++.+ .|++||+.+++.. ..+.......
T Consensus 171 ~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~- 249 (719)
T 1z68_A 171 KYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIA- 249 (719)
T ss_dssp SCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHH-
T ss_pred cccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCC-
Confidence 489999999999987643 6889999887653 1221100000
Q ss_pred CCceeEEEEEEccCCEEEEE-cCC----CcEEEEe----CCCCeeEEEe----eccccCeE-----EEEEeCCCCEEEE-
Q psy12614 201 SKNTAVWCVAFCADFTIITG-DSG----GFVRFWD----GKTGVQWSDV----KTHKKDIL-----ALTVSEDENYLYC- 261 (708)
Q Consensus 201 ~~~~~v~~~~~~~~~~l~~~-~~d----g~i~~wd----~~~~~~~~~~----~~~~~~i~-----~~~~s~~~~~l~~- 261 (708)
.+...+..++|+||++++.. ... ..|.+|| ..+++....+ .+|...+. .++|+|||+.|+.
T Consensus 250 ~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~ 329 (719)
T 1z68_A 250 SSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKI 329 (719)
T ss_dssp TSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEE
T ss_pred CCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEE
Confidence 23778999999999975433 222 2488999 8887766555 46667676 8899999986654
Q ss_pred -EecCC--eEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe-CCEEEEEcCC-----CeEEEEeCCC-
Q psy12614 262 -AGVDP--TVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH-GNRLYSGGLD-----SYLSLSYYPP- 331 (708)
Q Consensus 262 -~~~dg--~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~-~~~l~s~~~d-----~~i~iw~~~~- 331 (708)
...+| .|.+|++.+ ++ ...+..+...+..+.+. ++.++..+.+ +..++|.+..
T Consensus 330 ~~~~~g~~~l~~~~~~~--------~~---------~~~lt~~~~~v~~~~~~d~~~i~~~~~~~~~~~~~~~l~~~~~~ 392 (719)
T 1z68_A 330 FSDKDGYKHIHYIKDTV--------EN---------AIQITSGKWEAINIFRVTQDSLFYSSNEFEEYPGRRNIYRISIG 392 (719)
T ss_dssp EECTTSCEEEEEESSCS--------TT---------CEECSCSSSCEEEEEEECSSEEEEEESCGGGCTTCBEEEEEECS
T ss_pred EEccCCceEEEEEECCC--------Cc---------eEecccCceEEEEEEEEeCCEEEEEEecCCCCCceEEEEEEeCC
Confidence 44555 566677665 42 23344455556665555 6666655554 7888887754
Q ss_pred -C--ceeecCc----cCCCCceEEEEcCCcEEEEEc----CCeEEEEEecCCC
Q psy12614 332 -K--TLVKYPC----TLAQSTPVSLAKDIQHVLLQY----TSHLELWSLGSAQ 373 (708)
Q Consensus 332 -~--~~~~~~~----~~~~~~~~~~s~~~~~l~~~~----~~~i~i~~~~~~~ 373 (708)
+ ....+.. +......+.++|+++.++... ...+.+|++.+++
T Consensus 393 ~g~~~~~~l~~~~~~~~~~~~~~~~s~dg~~l~~~~s~~~~p~~~l~d~~~g~ 445 (719)
T 1z68_A 393 SYPPSKKCVTCHLRKERCQYYTASFSDYAKYYALVCYGPGIPISTLHDGRTDQ 445 (719)
T ss_dssp SSSCCEEESSTTTTTTTBCBEEEEECGGGSSEEEEECCBSSCEEEEECSSSCC
T ss_pred CCCCCceeccCccCCCCCceEEEEECCCCCEEEEEcCCCCCCeEEEEECCCCC
Confidence 3 1233331 112345688999998877531 2467888876644
|
| >1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B* | Back alignment and structure |
|---|
Probab=99.88 E-value=1.5e-20 Score=187.53 Aligned_cols=262 Identities=12% Similarity=0.079 Sum_probs=197.6
Q ss_pred CEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCC-cEEEEEEe--CCEE-EEEcCCCcEEEEECCCCeEeEEEee-c---
Q psy12614 39 SRLAVSRADQSIEIWDISETPHVDRVFIGDPLSN-SIECLTWF--NDRL-FSGGLQGFVNEYDMRRLNIKSSTAV-T--- 110 (708)
Q Consensus 39 ~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~-~v~~l~~~--~~~l-~s~~~d~~i~vwd~~~~~~~~~~~~-~--- 110 (708)
++|++++.++.|.+||..+++.+.....++. . .+..++|+ ++++ +++..++.|.+||+.+++.+..+.. +
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~ 79 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIADA--GPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEE 79 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTC--TTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTE
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCCC--CCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCccc
Confidence 4789999999999999999887763332332 2 48889999 6565 5566789999999999998877663 2
Q ss_pred -CCceEEEEEecCCCEEEEEe------------CCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCCe
Q psy12614 111 -SGTCWCLSVHKKKRLLAAGT------------EQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAAA 177 (708)
Q Consensus 111 -~~~v~~~~~s~~~~~la~~~------------~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~ 177 (708)
...+.+++|+|+|++|+++. .++.|.+||+.+++.. ..+.. ...+.+++|+||+++|+++ .+.
T Consensus 80 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~--~~~~~-~~~~~~~~~s~dg~~l~~~-~~~ 155 (337)
T 1pby_B 80 RVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRR--KAFEA-PRQITMLAWARDGSKLYGL-GRD 155 (337)
T ss_dssp EEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEE--EEEEC-CSSCCCEEECTTSSCEEEE-SSS
T ss_pred ccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEE--EEEeC-CCCcceeEECCCCCEEEEe-CCe
Confidence 22677899999999998886 5799999999988776 33332 3457889999999988888 238
Q ss_pred EEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEc-CCC-----------------------cEEEEeCC
Q psy12614 178 VRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGD-SGG-----------------------FVRFWDGK 232 (708)
Q Consensus 178 i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~-~dg-----------------------~i~~wd~~ 232 (708)
|.+||+.+++.+..+..... .. .+.|+||++ ++..+ .++ .|.+||+.
T Consensus 156 i~~~d~~~~~~~~~~~~~~~-----~~---~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~ 227 (337)
T 1pby_B 156 LHVMDPEAGTLVEDKPIQSW-----EA---ETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLE 227 (337)
T ss_dssp EEEEETTTTEEEEEECSTTT-----TT---TTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETT
T ss_pred EEEEECCCCcEeeeeecccc-----CC---CceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCC
Confidence 99999999988877654320 11 226788885 33332 222 47899999
Q ss_pred CCeeE-EEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe
Q psy12614 233 TGVQW-SDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH 311 (708)
Q Consensus 233 ~~~~~-~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~ 311 (708)
+++.. ..+..+...+.+++|+|++++++++ ++.|.+||+.+ ++ ....+. ....+.+++|+
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~--------~~--------~~~~~~-~~~~~~~~~~s 288 (337)
T 1pby_B 228 TGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEK--------NA--------SIKRVP-LPHSYYSVNVS 288 (337)
T ss_dssp TCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTT--------TE--------EEEEEE-CSSCCCEEEEC
T ss_pred CCCceEeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCC--------Cc--------Ccceec-CCCceeeEEEC
Confidence 88764 2234466678899999999999988 68999999988 54 233333 33567889998
Q ss_pred --CCEEEEEcCCCeEEEEeCCCCc
Q psy12614 312 --GNRLYSGGLDSYLSLSYYPPKT 333 (708)
Q Consensus 312 --~~~l~s~~~d~~i~iw~~~~~~ 333 (708)
+++|++++.++.|.+||+.+..
T Consensus 289 ~dg~~l~~~~~~~~i~v~d~~~~~ 312 (337)
T 1pby_B 289 TDGSTVWLGGALGDLAAYDAETLE 312 (337)
T ss_dssp TTSCEEEEESBSSEEEEEETTTCC
T ss_pred CCCCEEEEEcCCCcEEEEECcCCc
Confidence 7889999999999999998765
|
| >3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=99.87 E-value=1.1e-19 Score=181.71 Aligned_cols=247 Identities=8% Similarity=0.116 Sum_probs=174.3
Q ss_pred CCCCcEEEEEEcCCCCEEEEEeC---CCcEEEEeCCCCCeEE-EEEecCCCCCcEEEEEEe--CCEEEEEc-CCCcEEEE
Q psy12614 24 PEPKVINCIACEPKSSRLAVSRA---DQSIEIWDISETPHVD-RVFIGDPLSNSIECLTWF--NDRLFSGG-LQGFVNEY 96 (708)
Q Consensus 24 ~h~~~v~~~~~s~~~~~la~~~~---dg~v~iwd~~~~~~~~-~~~~~h~~~~~v~~l~~~--~~~l~s~~-~d~~i~vw 96 (708)
.+...+..++|+|||+ |++++. ++.|.+||+.++.... ..+..+. ..+..++|+ +++|++++ .++.|.+|
T Consensus 37 ~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~--~~p~~~a~spdg~~l~~~~~~~~~v~v~ 113 (347)
T 3hfq_A 37 AATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPG--TPPAYVAVDEARQLVYSANYHKGTAEVM 113 (347)
T ss_dssp EECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEES--CCCSEEEEETTTTEEEEEETTTTEEEEE
T ss_pred eccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCC--CCCEEEEECCCCCEEEEEeCCCCEEEEE
Confidence 3456778899999999 555443 6899999998766322 2344566 788999999 88888877 78999999
Q ss_pred ECCC-Ce--EeEEEeec---------CCceEEEEEecCCCEEEEEeCCCcEEEEEcc-CCcEEEEEecccc-cccEEEEE
Q psy12614 97 DMRR-LN--IKSSTAVT---------SGTCWCLSVHKKKRLLAAGTEQGHINLFQIS-DEGLLYEKLLDRQ-QGRILCTA 162 (708)
Q Consensus 97 d~~~-~~--~~~~~~~~---------~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~-~~~~~~~~~~~~~-~~~v~~~~ 162 (708)
++.. +. .+..+... ...+.+++|+|||+++++...++.|.+|++. ++++.....+..+ ...+..++
T Consensus 114 ~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~ 193 (347)
T 3hfq_A 114 KIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLV 193 (347)
T ss_dssp EECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEE
T ss_pred EeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEE
Confidence 9963 32 33333221 2248899999999966666668899999998 5655432322222 33678899
Q ss_pred ECCCCCEEEEec-CC-eEEEEEcCC--CceEE--EEEecccCCCCCceeEEEEEEccCCE-E-EEEcCCCcEEEEeCCC-
Q psy12614 163 WHSSGDYLVTGC-AA-AVRVWDIHK--GHAIH--KMSLDKSSKFSKNTAVWCVAFCADFT-I-ITGDSGGFVRFWDGKT- 233 (708)
Q Consensus 163 ~s~d~~~l~~~~-~d-~i~iwd~~~--~~~~~--~~~~~~~~~~~~~~~v~~~~~~~~~~-l-~~~~~dg~i~~wd~~~- 233 (708)
|+|||++|++++ .+ .|.+|++.. ++... .+...... +.....+..++|+|||+ + ++...++.|.+|++..
T Consensus 194 ~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~ 272 (347)
T 3hfq_A 194 FSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPAD-YTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTAD 272 (347)
T ss_dssp ECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTT-CCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGG
T ss_pred ECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCC-CCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCC
Confidence 999999777654 45 999999874 54322 22211100 01125688999999996 4 4556689999999873
Q ss_pred --CeeEEEeeccccCeEEEEEeCCCCEEEEEecC-CeEEEEEcc
Q psy12614 234 --GVQWSDVKTHKKDILALTVSEDENYLYCAGVD-PTVVCFQRT 274 (708)
Q Consensus 234 --~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d-g~i~iw~~~ 274 (708)
.+.+..+..+...+..++|+|||++|++++.+ +.+.+|++.
T Consensus 273 g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d 316 (347)
T 3hfq_A 273 GHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARD 316 (347)
T ss_dssp GCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred CcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEe
Confidence 25556666666778999999999999888765 899999654
|
| >1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.87 E-value=4.4e-21 Score=212.20 Aligned_cols=188 Identities=7% Similarity=0.053 Sum_probs=139.7
Q ss_pred EEEEe-CCEEEEEcCCCcEEEEECCCCeEeEEEeecCC---ceEEEEEecCCCEEEEEeC---------CCcEEEEEccC
Q psy12614 76 CLTWF-NDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSG---TCWCLSVHKKKRLLAAGTE---------QGHINLFQISD 142 (708)
Q Consensus 76 ~l~~~-~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~---~v~~~~~s~~~~~la~~~~---------d~~i~iwd~~~ 142 (708)
+++|+ ...++..+.|++|++||+.+++....+..|.. .+.+++|||||++||+++. ++.|++||+.+
T Consensus 20 ~~~~s~dg~~~~~~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~ 99 (719)
T 1z68_A 20 FPNWISGQEYLHQSADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSN 99 (719)
T ss_dssp CCEESSSSEEEEECTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTT
T ss_pred ccEECCCCeEEEEcCCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCC
Confidence 67888 33566566799999999999998877776644 3899999999999998876 68999999999
Q ss_pred CcEEEEEecccccccEEEEEECCCCCEEEEecCCeEEEEEcCCCceEEEEEecccCCCCCceeE----------------
Q psy12614 143 EGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAAAVRVWDIHKGHAIHKMSLDKSSKFSKNTAV---------------- 206 (708)
Q Consensus 143 ~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v---------------- 206 (708)
++......+ ...+..++|||||+.|+++..+.|++||+.+++.......+. ...+
T Consensus 100 g~~~~~~~l---~~~~~~~~~SPDG~~la~~~~~~i~~~~~~~g~~~~l~~~~~------~~~v~~g~~~~v~~ee~~~~ 170 (719)
T 1z68_A 100 GEFVRGNEL---PRPIQYLCWSPVGSKLAYVYQNNIYLKQRPGDPPFQITFNGR------ENKIFNGIPDWVYEEEMLAT 170 (719)
T ss_dssp TEECCSSCC---CSSBCCEEECSSTTCEEEEETTEEEEESSTTSCCEECCCCCB------TTTEEESSCCHHHHHHTTCS
T ss_pred Cccccceec---CcccccceECCCCCEEEEEECCeEEEEeCCCCCcEEEecCCC------cCCeEcccccceeeeecccC
Confidence 876210112 356889999999999999875599999999887654322211 2212
Q ss_pred -EEEEEccCCE-EEEEcCCC----------------------------------cEEEEeCCCCeeE---E-----Eeec
Q psy12614 207 -WCVAFCADFT-IITGDSGG----------------------------------FVRFWDGKTGVQW---S-----DVKT 242 (708)
Q Consensus 207 -~~~~~~~~~~-l~~~~~dg----------------------------------~i~~wd~~~~~~~---~-----~~~~ 242 (708)
.+++|+|||+ |++++.|. .|++||+.+++.. . .+.+
T Consensus 171 ~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~ 250 (719)
T 1z68_A 171 KYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIAS 250 (719)
T ss_dssp SCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHT
T ss_pred cccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCC
Confidence 4899999996 77665442 7889999887642 1 1335
Q ss_pred cccCeEEEEEeCCCCEEEEEecC----CeEEEEE
Q psy12614 243 HKKDILALTVSEDENYLYCAGVD----PTVVCFQ 272 (708)
Q Consensus 243 ~~~~i~~~~~s~~~~~l~~~~~d----g~i~iw~ 272 (708)
|...+..++|+||++.+++.... ..|.+||
T Consensus 251 ~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d 284 (719)
T 1z68_A 251 SDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICD 284 (719)
T ss_dssp SCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEE
T ss_pred CcceEEEeEEeCCCeEEEEEeccccCeEEEEEEc
Confidence 77889999999998777664432 2488888
|
| >3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=99.87 E-value=4.2e-19 Score=177.62 Aligned_cols=277 Identities=14% Similarity=0.140 Sum_probs=187.8
Q ss_pred EEEEEe----CCCcEEEEeCC--CCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcC---CCcEEEEECCCCe--EeEE
Q psy12614 40 RLAVSR----ADQSIEIWDIS--ETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGL---QGFVNEYDMRRLN--IKSS 106 (708)
Q Consensus 40 ~la~~~----~dg~v~iwd~~--~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~---d~~i~vwd~~~~~--~~~~ 106 (708)
.+++|+ .++.|.+|+++ +++........+. ..+..++|+ |+ |++++. ++.|.+||+.+++ .+..
T Consensus 4 ~~~vg~y~~~~~~~i~v~~~d~~tg~~~~~~~~~~~--~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~ 80 (347)
T 3hfq_A 4 RILFGTYTKKTSQGIYQGTLDTTAKTLTNDGLLAAT--QNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNT 80 (347)
T ss_dssp EEEEEECCSSSCCEEEEEEEETTTTEEEEEEEEEEC--SCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEE
T ss_pred EEEEEeccCCCCCCEEEEEEcCCCCeEEEeeeeecc--CCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeee
Confidence 455553 24567777665 4555433444555 678889999 55 666654 6899999998776 4455
Q ss_pred EeecCCceEEEEEecCCCEEEEEe-CCCcEEEEEcc-CCcEEEEEeccc---------ccccEEEEEECCCCCEEEEecC
Q psy12614 107 TAVTSGTCWCLSVHKKKRLLAAGT-EQGHINLFQIS-DEGLLYEKLLDR---------QQGRILCTAWHSSGDYLVTGCA 175 (708)
Q Consensus 107 ~~~~~~~v~~~~~s~~~~~la~~~-~d~~i~iwd~~-~~~~~~~~~~~~---------~~~~v~~~~~s~d~~~l~~~~~ 175 (708)
+..+...+..++|+|||++|++++ .++.|.+|++. ++.......+.. +...+.+++|+|||+.+++...
T Consensus 81 ~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~ 160 (347)
T 3hfq_A 81 VVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLG 160 (347)
T ss_dssp EEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETT
T ss_pred eecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCC
Confidence 566788899999999999998887 67999999995 444332222221 1234889999999995555555
Q ss_pred C-eEEEEEcC-CCceEEEEEecccCCCCCceeEEEEEEccCCE-EE-EEcCCCcEEEEeCCC--Cee--EEEeeccc---
Q psy12614 176 A-AVRVWDIH-KGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-II-TGDSGGFVRFWDGKT--GVQ--WSDVKTHK--- 244 (708)
Q Consensus 176 d-~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~-~~~~dg~i~~wd~~~--~~~--~~~~~~~~--- 244 (708)
+ .|.+|++. +++......... .....+..++|+|||+ ++ +...++.|.+|++.. ++. +..+....
T Consensus 161 ~~~v~~~~~~~~g~~~~~~~~~~----~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~ 236 (347)
T 3hfq_A 161 SDKVYVYNVSDAGQLSEQSVLTM----EAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADY 236 (347)
T ss_dssp TTEEEEEEECTTSCEEEEEEEEC----CTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTC
T ss_pred CCEEEEEEECCCCcEEEeeeEEc----CCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCC
Confidence 6 99999998 555432221111 1134577899999996 44 456788999999874 543 22333222
Q ss_pred ---cCeEEEEEeCCCCEEEE-EecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEEE
Q psy12614 245 ---KDILALTVSEDENYLYC-AGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSG 318 (708)
Q Consensus 245 ---~~i~~~~~s~~~~~l~~-~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~ 318 (708)
..+..++|+|||++|++ ...++.|.+|++.. .. .+.....+..+...+..++|+ +++|+++
T Consensus 237 ~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~--------~g-----~~~~~~~~~~~~~~~~~~~~spdg~~l~v~ 303 (347)
T 3hfq_A 237 TAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTA--------DG-----HLTLIQQISTEGDFPRDFDLDPTEAFVVVV 303 (347)
T ss_dssp CSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECG--------GG-----CEEEEEEEECSSSCCCEEEECTTSSEEEEE
T ss_pred CCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECC--------CC-----cEEEeEEEecCCCCcCeEEECCCCCEEEEE
Confidence 34888999999998854 45589999999974 10 122445555666678899999 7777777
Q ss_pred cC-CCeEEEEeC--CCCceee
Q psy12614 319 GL-DSYLSLSYY--PPKTLVK 336 (708)
Q Consensus 319 ~~-d~~i~iw~~--~~~~~~~ 336 (708)
+. ++.+.+|++ .++.+..
T Consensus 304 ~~~~~~v~v~~~d~~tg~l~~ 324 (347)
T 3hfq_A 304 NQNTDNATLYARDLTSGKLSL 324 (347)
T ss_dssp ETTTTEEEEEEECTTTCCEEE
T ss_pred EcCCCcEEEEEEeCCCCeEEe
Confidence 65 589999955 4444443
|
| >3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A | Back alignment and structure |
|---|
Probab=99.87 E-value=1.4e-18 Score=174.79 Aligned_cols=304 Identities=12% Similarity=0.118 Sum_probs=192.4
Q ss_pred CCCcEEEEeC--CCCeeEEEeeccccCeEEEEEeCCCCEEEEEecC----CeEEEEEccCCcccccCCCCCCCCcceEEe
Q psy12614 222 SGGFVRFWDG--KTGVQWSDVKTHKKDILALTVSEDENYLYCAGVD----PTVVCFQRTRKPQVCSTSGPEQGSSVWVRS 295 (708)
Q Consensus 222 ~dg~i~~wd~--~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d----g~i~iw~~~~~~~~~~~~g~~~~~~~~~~~ 295 (708)
.++.|.+|++ .+++.......+...+..++|+||+++|++++.+ +.+.+|++.. .. ......
T Consensus 25 ~~~~i~~~~~d~~~g~~~~~~~~~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~--------~~----g~~~~~ 92 (361)
T 3scy_A 25 NSKGIYTFRFNEETGESLPLSDAEVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDK--------EK----GTLHLL 92 (361)
T ss_dssp SCCEEEEEEEETTTCCEEEEEEEECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEET--------TT----TEEEEE
T ss_pred CCCCEEEEEEeCCCCCEEEeecccCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeC--------CC----CcEEEe
Confidence 3567888865 5565433322266778889999999999999886 7999999876 21 112233
Q ss_pred EEEeccccceEEEEEeCCEEEEEc-CCCeEEEEeCCCCc-eeecCccCCCCceEEEEcCCcEEEEEcCCeEEEEEecCCC
Q psy12614 296 VNRVIHEGDVKSLALHGNRLYSGG-LDSYLSLSYYPPKT-LVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQ 373 (708)
Q Consensus 296 ~~~~~~~~~v~~l~~~~~~l~s~~-~d~~i~iw~~~~~~-~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~ 373 (708)
.....+......+++.++.|++++ .++.+.+|++.... +.... .........
T Consensus 93 ~~~~~~~~~p~~~~~dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~--------------------------~~~~~~g~~ 146 (361)
T 3scy_A 93 NTQKTMGADPCYLTTNGKNIVTANYSGGSITVFPIGQDGALLPAS--------------------------DVIEFKGSG 146 (361)
T ss_dssp EEEECSSSCEEEEEECSSEEEEEETTTTEEEEEEBCTTSCBCSCS--------------------------EEEECCCCC
T ss_pred eEeccCCCCcEEEEECCCEEEEEECCCCEEEEEEeCCCCcCcccc--------------------------eeEEccCCC
Confidence 334444556667777766665554 57788888886432 11111 000000000
Q ss_pred CCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEEE-c-CCceEEEEEEecCC----c-ceeE---Ee
Q psy12614 374 STDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYS-T-ESCVRLHSLDLDGD----K-PQIS---RI 443 (708)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~-~-d~~i~i~~~~~~~~----~-~~~~---~~ 443 (708)
.. + .......+.+++|+|||++++++ . ++.+.+|++..... . +... ..
T Consensus 147 ------~~----------~------~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~ 204 (361)
T 3scy_A 147 ------PD----------K------ERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEA 204 (361)
T ss_dssp ------SC----------T------TTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEE
T ss_pred ------CC----------c------cccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccc
Confidence 00 0 00123446889999999987764 3 78999999986443 2 2221 11
Q ss_pred ecCCcccccceeEEEEEecCCCeEEEEec-CCc--EEEecCCCeEEEEEecCCCCCccCcceEEEEECCCCcEEEEEecC
Q psy12614 444 KNLPAPLFKSIFTHVLISADSTLLLAVSL-NGP--LYIIDLSSLEIKYCVDPYKSNLMSDVISLVQMSECKQYIVCADRK 520 (708)
Q Consensus 444 ~~~~~~~~~~~i~~~~~s~d~~~l~~~~~-dg~--i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d 520 (708)
..++.. ..+.+++|+|||+++++++. ++. +|+++.+..+.+..+.....+ ......++|+|||++|+++..+
T Consensus 205 ~~~~~~---~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~--~~~~~~i~~spdg~~l~v~~~~ 279 (361)
T 3scy_A 205 FKVAPG---SGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVN--AQGSGDIHLSPDGKYLYASNRL 279 (361)
T ss_dssp EECCTT---CCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSC--CCCEEEEEECTTSSEEEEEECS
T ss_pred eecCCC---CCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCC--CCCcccEEECCCCCEEEEECCC
Confidence 112222 24566999999999988874 555 888887655555555544443 4567899999999999777654
Q ss_pred --CeEEEEECC----c--eeeecCCCCCCceEEEEcCCCCEEEEEe-cCCcEEEEEcC--CCCCCchhhhhhccCchhhh
Q psy12614 521 --SHVVIWKNG----Q--HHASLPRYRKPSTAMAIHPTLSTLVTVY-SDHRIVEFDLN--RKAFTTFSRKLETNHPNEWL 589 (708)
Q Consensus 521 --~~i~iw~~~----~--~~~~~~~~~~~v~~l~~s~d~~~l~~~~-~dg~i~vwd~~--~~~~~~~~~~~~~~~~~~~~ 589 (708)
+.|.+|++. + ....+.. ...+..++|+|||++|++++ .++.|.+|+++ +++... +.. .
T Consensus 280 ~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~--------~~~--~ 348 (361)
T 3scy_A 280 KADGVAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLLTD--------IKK--D 348 (361)
T ss_dssp SSCEEEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCEEE--------CSC--C
T ss_pred CCCEEEEEEEcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcEee--------cce--e
Confidence 899999996 2 2223444 56789999999999999887 57889996554 565431 111 1
Q ss_pred cCCCCeeEEEeC
Q psy12614 590 SRQLPVLGIEFD 601 (708)
Q Consensus 590 ~~~~~i~~l~~s 601 (708)
.+...+.++.|.
T Consensus 349 ~~~~~p~~v~~~ 360 (361)
T 3scy_A 349 IKVDKPVCLKFV 360 (361)
T ss_dssp EECSSEEEEEEE
T ss_pred eeCCCCeEEEEc
Confidence 233467788775
|
| >3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A | Back alignment and structure |
|---|
Probab=99.87 E-value=1.2e-20 Score=203.08 Aligned_cols=266 Identities=13% Similarity=0.071 Sum_probs=192.2
Q ss_pred CCcEEEEEEcCCCCEEEEEeC-CCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe-CCEEEEEcC---CCcEEEEECCC
Q psy12614 26 PKVINCIACEPKSSRLAVSRA-DQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF-NDRLFSGGL---QGFVNEYDMRR 100 (708)
Q Consensus 26 ~~~v~~~~~s~~~~~la~~~~-dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~-~~~l~s~~~---d~~i~vwd~~~ 100 (708)
..+|.+++|+|||++||+++. ||++.||++.+++.. .+..|. ...+..++|+ ++.+++++. +....+|.+..
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~--~lt~~~-~~~~~~~~~spd~~l~~~~~~~g~~~~~l~~~~~ 97 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETV--KLNREP-INSVLDPHYGVGRVILVRDVSKGAEQHALFKVNT 97 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEE--ECCSSC-CSEECEECTTCSEEEEEEECSTTSCCEEEEEEET
T ss_pred ccchheeecCCCCCeEEEEEccCCceeEEEEcCCCcE--eeeccc-ccccccccCCCCeEEEEeccCCCCcceEEEEEec
Confidence 457999999999999999876 999999999666543 455444 2589999999 755555554 45556655432
Q ss_pred ---CeEeEEEeecCCceEEEEEecCCCEE-EEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC
Q psy12614 101 ---LNIKSSTAVTSGTCWCLSVHKKKRLL-AAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA 176 (708)
Q Consensus 101 ---~~~~~~~~~~~~~v~~~~~s~~~~~l-a~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d 176 (708)
+... .+... ..+...+|+||++.+ ++.+.++.+.+||+.+++.. .+..+.. .+++|+|||++|++++.+
T Consensus 98 ~~~g~~~-~l~~~-~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~---~l~~~~~--~~~~~spDG~~la~~~~~ 170 (582)
T 3o4h_A 98 SRPGEEQ-RLEAV-KPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLR---ELARLPG--FGFVSDIRGDLIAGLGFF 170 (582)
T ss_dssp TSTTCCE-ECTTS-CSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEE---EEEEESS--CEEEEEEETTEEEEEEEE
T ss_pred cCCCccc-cccCC-CCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEE---EeecCCC--ceEEECCCCCEEEEEEEc
Confidence 2222 33322 234467899988643 33344455669999998775 2222333 789999999999966543
Q ss_pred -----eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCC--cEEEEeCCCCeeEEEeeccccCeE
Q psy12614 177 -----AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGG--FVRFWDGKTGVQWSDVKTHKKDIL 248 (708)
Q Consensus 177 -----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg--~i~~wd~~~~~~~~~~~~~~~~i~ 248 (708)
.|++||+.+++.. .+. .+...+..++|+|||+ ++++..++ .|++||+.+++.. .+..|...+.
T Consensus 171 ~~~~~~i~~~d~~~g~~~-~l~-------~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~ 241 (582)
T 3o4h_A 171 GGGRVSLFTSNLSSGGLR-VFD-------SGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKDFS 241 (582)
T ss_dssp ETTEEEEEEEETTTCCCE-EEC-------CSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSHHH
T ss_pred CCCCeEEEEEcCCCCCce-Eee-------cCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcChh
Confidence 6999999888765 343 2367789999999996 77777788 8999999998877 7777777777
Q ss_pred EEE--------EeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe-CCEEEEEc
Q psy12614 249 ALT--------VSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH-GNRLYSGG 319 (708)
Q Consensus 249 ~~~--------~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~-~~~l~s~~ 319 (708)
.++ |+|||..+++++.++.+++|++ . . ... ...+.+.+++|+ +..+++++
T Consensus 242 ~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~-g--------~----------~~~--~~~~~v~~~~~sdg~~l~~~s 300 (582)
T 3o4h_A 242 SYRPTAITWLGYLPDGRLAVVARREGRSAVFID-G--------E----------RVE--APQGNHGRVVLWRGKLVTSHT 300 (582)
T ss_dssp HHCCSEEEEEEECTTSCEEEEEEETTEEEEEET-T--------E----------EEC--CCSSEEEEEEEETTEEEEEEE
T ss_pred hhhhccccceeEcCCCcEEEEEEcCCcEEEEEE-C--------C----------eec--cCCCceEEEEecCCEEEEEEc
Confidence 777 9999988999999999999998 5 1 111 234567788888 77778877
Q ss_pred CCC---eEEEEeCCC
Q psy12614 320 LDS---YLSLSYYPP 331 (708)
Q Consensus 320 ~d~---~i~iw~~~~ 331 (708)
.+. .+.+|+..+
T Consensus 301 ~~~~p~~l~~~d~~~ 315 (582)
T 3o4h_A 301 SLSTPPRIVSLPSGE 315 (582)
T ss_dssp ETTEEEEEEEETTCC
T ss_pred CCCCCCeEEEEcCCC
Confidence 764 466666654
|
| >1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B* | Back alignment and structure |
|---|
Probab=99.86 E-value=6.2e-20 Score=184.00 Aligned_cols=280 Identities=13% Similarity=0.057 Sum_probs=192.1
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEE-EEEcCCCcEEEEECCCCeEeEEE
Q psy12614 31 CIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRL-FSGGLQGFVNEYDMRRLNIKSST 107 (708)
Q Consensus 31 ~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l-~s~~~d~~i~vwd~~~~~~~~~~ 107 (708)
.++++++++++++++.++.|.+||..+++.+. .+..+. ...+..++|+ ++++ ++...++.|.+||+.+++.+..+
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~-~~~~~~-~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~ 81 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYK-SCVMPD-KFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHA 81 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTTEEEE-EEECSS-CCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCCcEEE-EEecCC-CCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEE
Confidence 46788999999999999999999999988766 554332 1367889999 6655 45567899999999999988777
Q ss_pred eecC------CceEEEEEecCCCEEEEEeCC------------CcEEEEEccCCcEEEEEecccccccEEEEEECCCCCE
Q psy12614 108 AVTS------GTCWCLSVHKKKRLLAAGTEQ------------GHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDY 169 (708)
Q Consensus 108 ~~~~------~~v~~~~~s~~~~~la~~~~d------------~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~ 169 (708)
.... ..+.+++|+|||++|++++.+ +.|.+||+.+++.........+...+.+++|+|||+
T Consensus 82 ~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~- 160 (349)
T 1jmx_B 82 NLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGS- 160 (349)
T ss_dssp ESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSC-
T ss_pred EcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCCcccceeECCCCc-
Confidence 6432 237889999999999998865 899999998854321011112334688999999999
Q ss_pred EEEecCCeEEEEEcCCCceEEEEEecccCC--------------CC---CceeEEEEEEccCCEE--EEEcCCCcEEEEe
Q psy12614 170 LVTGCAAAVRVWDIHKGHAIHKMSLDKSSK--------------FS---KNTAVWCVAFCADFTI--ITGDSGGFVRFWD 230 (708)
Q Consensus 170 l~~~~~d~i~iwd~~~~~~~~~~~~~~~~~--------------~~---~~~~v~~~~~~~~~~l--~~~~~dg~i~~wd 230 (708)
+++++. .|.+||+.+++.+..+....... .. .......+++++++.. ........+..+|
T Consensus 161 l~~~~~-~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 239 (349)
T 1jmx_B 161 LYVAGP-DIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVD 239 (349)
T ss_dssp EEEESS-SEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEE
T ss_pred EEEccC-cEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEe
Confidence 655543 59999999999887765431000 00 0014456777765420 0000011122244
Q ss_pred CCCCee-EEEeeccccCeEEEEEeC-CCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEE
Q psy12614 231 GKTGVQ-WSDVKTHKKDILALTVSE-DENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSL 308 (708)
Q Consensus 231 ~~~~~~-~~~~~~~~~~i~~~~~s~-~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l 308 (708)
..+++. ...+..+...+..++++| ++++++++ ++.|.+||+.+ ++ ....+. ....+.++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~--------~~--------~~~~~~-~~~~~~~~ 300 (349)
T 1jmx_B 240 LKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQ--------RK--------LIKAAN-LDHTYYCV 300 (349)
T ss_dssp TTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTT--------TE--------EEEEEE-CSSCCCEE
T ss_pred ccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECcc--------Ce--------EEEEEc-CCCCccce
Confidence 444432 112233556788999999 99999988 78999999988 54 233333 33457789
Q ss_pred EEe--CCEEEEEcCCCeEEEEeCCCCc
Q psy12614 309 ALH--GNRLYSGGLDSYLSLSYYPPKT 333 (708)
Q Consensus 309 ~~~--~~~l~s~~~d~~i~iw~~~~~~ 333 (708)
+|+ ++.|++++.++.|.+||+.+..
T Consensus 301 ~~s~dg~~l~~~~~~~~v~v~d~~~~~ 327 (349)
T 1jmx_B 301 AFDKKGDKLYLGGTFNDLAVFNPDTLE 327 (349)
T ss_dssp EECSSSSCEEEESBSSEEEEEETTTTE
T ss_pred EECCCCCEEEEecCCCeEEEEeccccc
Confidence 998 7788888899999999998765
|
| >2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A | Back alignment and structure |
|---|
Probab=99.86 E-value=1.4e-19 Score=185.25 Aligned_cols=251 Identities=12% Similarity=0.121 Sum_probs=177.2
Q ss_pred eeeeccC----CCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCC----------CeEE----EEEecCCCCCcEEEEEE
Q psy12614 18 NIKFYAP----EPKVINCIACEPKSSRLAVSRADQSIEIWDISET----------PHVD----RVFIGDPLSNSIECLTW 79 (708)
Q Consensus 18 ~~~~~~~----h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~----------~~~~----~~~~~h~~~~~v~~l~~ 79 (708)
.+|++.. +...++.+++++++.+|++|+.+| |+||+...- ..+. .....+. ..|.+++|
T Consensus 24 ~vri~~~~~~~~~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~v~~l~~ 100 (434)
T 2oit_A 24 KVRIFDSPEELPKERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMK--FPIHHLAL 100 (434)
T ss_dssp EEECSCCCSSCCCSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCS--SCEEEEEE
T ss_pred eEEecCCccccCCCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCC--CcccEEEE
Confidence 4555532 345689999999999999999887 899875321 0110 0112244 78999999
Q ss_pred e--CCEEE----EEcCCCcEEEEECCCC--------eE---eEEEeecCCceEEEEEecC-CCEEEEEeCCCcEEEEEcc
Q psy12614 80 F--NDRLF----SGGLQGFVNEYDMRRL--------NI---KSSTAVTSGTCWCLSVHKK-KRLLAAGTEQGHINLFQIS 141 (708)
Q Consensus 80 ~--~~~l~----s~~~d~~i~vwd~~~~--------~~---~~~~~~~~~~v~~~~~s~~-~~~la~~~~d~~i~iwd~~ 141 (708)
+ +++|+ +++.|++|++||+.++ +. ...+.+|...|.+++|+|+ +.+||+++.||+|++||++
T Consensus 101 spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~ 180 (434)
T 2oit_A 101 SCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVT 180 (434)
T ss_dssp CTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEES
T ss_pred cCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcC
Confidence 9 88998 7889999999998765 22 4455679999999999998 7899999999999999999
Q ss_pred CCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEE--
Q psy12614 142 DEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTII-- 218 (708)
Q Consensus 142 ~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~-- 218 (708)
++... ....+|...|.+++|+|+|++|++++.| .|++||++ ++....+.......-.+...+.+++|++++.++
T Consensus 181 ~~~~~--~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~ 257 (434)
T 2oit_A 181 ETVKV--CATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIV 257 (434)
T ss_dssp SSEEE--EEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEE
T ss_pred CCcce--eeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEecCceEEEE
Confidence 88654 4556688999999999999999999999 99999998 666655543321000124589999999998744
Q ss_pred EEcCCC------cEEEEeCCCCe-----eEEEee-------ccccCeEEEEEeCCCCEEEEEec-CCeEEEEEcc
Q psy12614 219 TGDSGG------FVRFWDGKTGV-----QWSDVK-------THKKDILALTVSEDENYLYCAGV-DPTVVCFQRT 274 (708)
Q Consensus 219 ~~~~dg------~i~~wd~~~~~-----~~~~~~-------~~~~~i~~~~~s~~~~~l~~~~~-dg~i~iw~~~ 274 (708)
....+| .+++|++.... ....+. +....-..+.+-++.+++++++. .+.|.++...
T Consensus 258 ~~~~dg~~~~~~~v~i~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~dw~l~~v~s~~s~dv~vl~~~ 332 (434)
T 2oit_A 258 YAAADGTLETSPDVVMALLPKKEEKHPEIFVNFMEPCYGSCTERQHHYYLSYIEEWDLVLAASAASTEVSILARQ 332 (434)
T ss_dssp EEETTCCSSSCCEEEEEECCCTTTCCCCEEEECCCSSCCCCSSSCCCEEEEEEGGGTEEEEEETTCSBCEEEEEC
T ss_pred EccCCCccCCCCceEEEEeccCCCCCCcceEecccCCCCCCCCcCcceeeehhccCCEEEEecCCCCceeEEEec
Confidence 233343 38999997542 112211 12222233444477777776654 3446666543
|
| >4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ... | Back alignment and structure |
|---|
Probab=99.86 E-value=6.5e-20 Score=202.49 Aligned_cols=322 Identities=11% Similarity=0.029 Sum_probs=214.6
Q ss_pred CcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCC---CcEEEEEEe--CCEEEEEcCC---------Cc
Q psy12614 27 KVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLS---NSIECLTWF--NDRLFSGGLQ---------GF 92 (708)
Q Consensus 27 ~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~---~~v~~l~~~--~~~l~s~~~d---------~~ 92 (708)
....+++|+|||++|+++ ||.|++||+.+++... .+.+|... .....++|| |++|+.++.+ +.
T Consensus 17 ~~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~ 93 (740)
T 4a5s_A 17 LKLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSV-FLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTAS 93 (740)
T ss_dssp CCCCCEEECSSSEEEEEE--TTEEEEEETTTCCEEE-EECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEE
T ss_pred ccccccEECCCCcEEEEc--CCcEEEEECCCCceEE-EEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceE
Confidence 346689999999999986 8999999999998765 78887621 122447888 8899988876 56
Q ss_pred EEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccE--------------
Q psy12614 93 VNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRI-------------- 158 (708)
Q Consensus 93 i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v-------------- 158 (708)
+.+||+.+++.. .+..|.+.+...+|||||+.||.+ .++.|++|++.+++... .+..++...+
T Consensus 94 ~~~~d~~~~~~~-~l~~~~~~~~~~~~SPdG~~la~~-~~~~i~~~~~~~~~~~~-lt~~g~~~~~~~g~~~~v~~ee~~ 170 (740)
T 4a5s_A 94 YDIYDLNKRQLI-TEERIPNNTQWVTWSPVGHKLAYV-WNNDIYVKIEPNLPSYR-ITWTGKEDIIYNGITDWVYEEEVF 170 (740)
T ss_dssp EEEEETTTTEEC-CSSCCCTTEEEEEECSSTTCEEEE-ETTEEEEESSTTSCCEE-CCSCCBTTTEEESBCCHHHHHHTS
T ss_pred EEEEECCCCcEE-EcccCCCcceeeEECCCCCEEEEE-ECCeEEEEECCCCceEE-EcCCCCccceecCcccccccchhc
Confidence 779999998865 366777889999999999999987 46899999999887642 2333433333
Q ss_pred ---EEEEECCCCCEEEEecCC-------------------------------------eEEEEEcCC---Cc--eEEEEE
Q psy12614 159 ---LCTAWHSSGDYLVTGCAA-------------------------------------AVRVWDIHK---GH--AIHKMS 193 (708)
Q Consensus 159 ---~~~~~s~d~~~l~~~~~d-------------------------------------~i~iwd~~~---~~--~~~~~~ 193 (708)
..+.|||||++||.++.| .|.+||+.+ ++ ....+.
T Consensus 171 ~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~ 250 (740)
T 4a5s_A 171 SAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQIT 250 (740)
T ss_dssp SSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEEC
T ss_pred CCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEec
Confidence 348999999999987422 477888887 63 233333
Q ss_pred ecccCCCCCceeEEEEEEccCCE-EEEEc----CCCcEEEEeCCCCe----eE--EEe--eccccCeE-----EEEEeCC
Q psy12614 194 LDKSSKFSKNTAVWCVAFCADFT-IITGD----SGGFVRFWDGKTGV----QW--SDV--KTHKKDIL-----ALTVSED 255 (708)
Q Consensus 194 ~~~~~~~~~~~~v~~~~~~~~~~-l~~~~----~dg~i~~wd~~~~~----~~--~~~--~~~~~~i~-----~~~~s~~ 255 (708)
...... ++...+..++|+|||+ ++... .+..|.+||+.+++ +. ..+ ..+...+. .++|+||
T Consensus 251 ~~~~~~-~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspD 329 (740)
T 4a5s_A 251 APASML-IGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLD 329 (740)
T ss_dssp CCHHHH-TSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTT
T ss_pred CCccCC-CCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCC
Confidence 210000 1377899999999997 44332 23479999998887 22 112 34555544 7889999
Q ss_pred CCEEE-EEec-C--CeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEE-EeCCEEEE-EcC----CC--e
Q psy12614 256 ENYLY-CAGV-D--PTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLA-LHGNRLYS-GGL----DS--Y 323 (708)
Q Consensus 256 ~~~l~-~~~~-d--g~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~-~~~~~l~s-~~~----d~--~ 323 (708)
|+.|+ ..+. + ..|++|+..+ ++ ...+......+..+. ++++.++. +.. .+ .
T Consensus 330 G~~l~~~~s~~~G~~~l~~~~~~~--------~~---------~~~lT~g~~~v~~~~~~d~~~i~f~~~~~~~~~~~~~ 392 (740)
T 4a5s_A 330 GNSFYKIISNEEGYRHICYFQIDK--------KD---------CTFITKGTWEVIGIEALTSDYLYYISNEYKGMPGGRN 392 (740)
T ss_dssp SSEEEEEEECTTSCEEEEEEETTC--------SS---------CEESCCSSSCEEEEEEECSSEEEEEESCGGGCTTCBE
T ss_pred CCEEEEEEEcCCCceEEEEEECCC--------Cc---------eEecccCCEEEEEEEEEeCCEEEEEEecCCCCCceeE
Confidence 99877 5553 3 3688888876 43 223333344455543 44555444 433 22 4
Q ss_pred EEEEeCCCCcee-ecCcc----CCCCceEEEEcCCcEEEEEcCC----eEEEEEecCC
Q psy12614 324 LSLSYYPPKTLV-KYPCT----LAQSTPVSLAKDIQHVLLQYTS----HLELWSLGSA 372 (708)
Q Consensus 324 i~iw~~~~~~~~-~~~~~----~~~~~~~~~s~~~~~l~~~~~~----~i~i~~~~~~ 372 (708)
|...++.+.... .+.+. ........+||+++.++....+ .+.+++..++
T Consensus 393 ly~v~~~g~~~~~~lt~~~~~~~~~~~~~~~S~dg~~~~~~~s~~~~p~~~l~~~~~~ 450 (740)
T 4a5s_A 393 LYKIQLIDYTKVTCLSCELNPERCQYYSVSFSKEAKYYQLRCSGPGLPLYTLHSSVND 450 (740)
T ss_dssp EEEEETTEEEEEEESSTTTSTTTBCBEEEEECTTSSEEEEEECSBSSCEEEEEETTTT
T ss_pred EEEEECCCCCcceeeccccCCCCCceEEEEECCCCCEEEEEeCCCCCCEEEEEECCCC
Confidence 555555554433 33322 1344678999999988765333 5677766543
|
| >3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A | Back alignment and structure |
|---|
Probab=99.86 E-value=1.2e-18 Score=175.33 Aligned_cols=245 Identities=10% Similarity=0.056 Sum_probs=170.5
Q ss_pred CCCcEEEEEEcCCCCEEEEEeCC----CcEEEEeCCC--CCeEE-EEEecCCCCCcEEEEEEeCCEEEEEc-CCCcEEEE
Q psy12614 25 EPKVINCIACEPKSSRLAVSRAD----QSIEIWDISE--TPHVD-RVFIGDPLSNSIECLTWFNDRLFSGG-LQGFVNEY 96 (708)
Q Consensus 25 h~~~v~~~~~s~~~~~la~~~~d----g~v~iwd~~~--~~~~~-~~~~~h~~~~~v~~l~~~~~~l~s~~-~d~~i~vw 96 (708)
+...+..++|+|||++|++++.+ +.|.+|++.. ++... .....+. .....+++.+++|++++ .++.|.+|
T Consensus 48 ~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~--~~p~~~~~dg~~l~~~~~~~~~v~~~ 125 (361)
T 3scy_A 48 EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMG--ADPCYLTTNGKNIVTANYSGGSITVF 125 (361)
T ss_dssp ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSS--SCEEEEEECSSEEEEEETTTTEEEEE
T ss_pred cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCC--CCcEEEEECCCEEEEEECCCCEEEEE
Confidence 67778889999999999998875 7999999876 43322 1333344 66778888877777665 68899999
Q ss_pred ECCCCeEeEEE---eec-----------CCceEEEEEecCCCEEEEEeC-CCcEEEEEccCCc-------EEEE----Ee
Q psy12614 97 DMRRLNIKSST---AVT-----------SGTCWCLSVHKKKRLLAAGTE-QGHINLFQISDEG-------LLYE----KL 150 (708)
Q Consensus 97 d~~~~~~~~~~---~~~-----------~~~v~~~~~s~~~~~la~~~~-d~~i~iwd~~~~~-------~~~~----~~ 150 (708)
++.....+..+ ..+ ...+.+++|+|||++|++++. ++.|.+|++.... +... ..
T Consensus 126 ~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~ 205 (361)
T 3scy_A 126 PIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAF 205 (361)
T ss_dssp EBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEE
T ss_pred EeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccce
Confidence 99754322111 111 234588999999997766554 7899999987543 2111 12
Q ss_pred cccccccEEEEEECCCCCEEEEec-CC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcC--CCc
Q psy12614 151 LDRQQGRILCTAWHSSGDYLVTGC-AA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDS--GGF 225 (708)
Q Consensus 151 ~~~~~~~v~~~~~s~d~~~l~~~~-~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~--dg~ 225 (708)
.......+..++|+|||+++++++ .+ .|.+|++.+++.......... . .+......++|+|||+ ++++.. ++.
T Consensus 206 ~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~-~-~~~~~~~~i~~spdg~~l~v~~~~~~~~ 283 (361)
T 3scy_A 206 KVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAAD-T-VNAQGSGDIHLSPDGKYLYASNRLKADG 283 (361)
T ss_dssp ECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESC-S-SCCCCEEEEEECTTSSEEEEEECSSSCE
T ss_pred ecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecC-C-CCCCCcccEEECCCCCEEEEECCCCCCE
Confidence 223345678999999999888777 45 999999987754322221110 0 1134568999999996 545444 589
Q ss_pred EEEEeCC--CCe--eEEEeeccccCeEEEEEeCCCCEEEEEe-cCCeEEEEEcc
Q psy12614 226 VRFWDGK--TGV--QWSDVKTHKKDILALTVSEDENYLYCAG-VDPTVVCFQRT 274 (708)
Q Consensus 226 i~~wd~~--~~~--~~~~~~~~~~~i~~~~~s~~~~~l~~~~-~dg~i~iw~~~ 274 (708)
|.+|++. +++ .+..+.. ...+..++|+|||++|++++ .++.|.+|++.
T Consensus 284 i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d 336 (361)
T 3scy_A 284 VAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQIFERD 336 (361)
T ss_dssp EEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEEEEEEEC
T ss_pred EEEEEEcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEECCCCCEEEEEEE
Confidence 9999985 444 4444544 56788999999999998887 56899997665
|
| >3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp} | Back alignment and structure |
|---|
Probab=99.85 E-value=1.9e-19 Score=183.32 Aligned_cols=290 Identities=11% Similarity=0.016 Sum_probs=203.1
Q ss_pred EEEECCCCeEeEEEeecCCceEE-----EEEecCCCEEEEEeC-CC--cEEEEEccCCcEEEEEecccccccEEEEEECC
Q psy12614 94 NEYDMRRLNIKSSTAVTSGTCWC-----LSVHKKKRLLAAGTE-QG--HINLFQISDEGLLYEKLLDRQQGRILCTAWHS 165 (708)
Q Consensus 94 ~vwd~~~~~~~~~~~~~~~~v~~-----~~~s~~~~~la~~~~-d~--~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~ 165 (708)
..+|..++..+..+..|...... .+|||||++|++++. ++ .|.+||+.+++.. .....+...+..++|+|
T Consensus 13 ~~~~~~~g~~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~--~lt~~~~~~~~~~~~sp 90 (388)
T 3pe7_A 13 TYQDASTGAQVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVAT--QLTEGRGDNTFGGFLSP 90 (388)
T ss_dssp EEECTTTCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEE--ECCCSSCBCSSSCEECT
T ss_pred EEecCCCCcceEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceE--EeeeCCCCCccceEEcC
Confidence 44577888888888888766666 889999999999887 66 4888999988875 44555555555778999
Q ss_pred CCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEE--EEccCCEEEEE----------------------
Q psy12614 166 SGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCV--AFCADFTIITG---------------------- 220 (708)
Q Consensus 166 d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~~l~~~---------------------- 220 (708)
||+.|+.++.+ .|++||+.+++........ ...+... .++|+++++++
T Consensus 91 dg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~-------~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~ 163 (388)
T 3pe7_A 91 DDDALFYVKDGRNLMRVDLATLEENVVYQVP-------AEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYF 163 (388)
T ss_dssp TSSEEEEEETTTEEEEEETTTCCEEEEEECC-------TTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGG
T ss_pred CCCEEEEEeCCCeEEEEECCCCcceeeeech-------hhcccccceeECCCCCeeccccccCcccccccccchhhhhhc
Confidence 99999999988 9999999999877655543 3334333 45889864432
Q ss_pred -cCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeC-CCCEEEEEecC------CeEEEEEccCCcccccCCCCCCCCcce
Q psy12614 221 -DSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSE-DENYLYCAGVD------PTVVCFQRTRKPQVCSTSGPEQGSSVW 292 (708)
Q Consensus 221 -~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~-~~~~l~~~~~d------g~i~iw~~~~~~~~~~~~g~~~~~~~~ 292 (708)
..+..|.+||+.+++... +..+...+..++|+| ||+.|+....+ ..|.+++... ++
T Consensus 164 ~~~~~~l~~~d~~~g~~~~-l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~--------~~------- 227 (388)
T 3pe7_A 164 TKPCCRLMRVDLKTGESTV-ILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDG--------TN------- 227 (388)
T ss_dssp GCCCEEEEEEETTTCCEEE-EEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTS--------CC-------
T ss_pred cCCcceEEEEECCCCceEE-eecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCC--------Cc-------
Confidence 244789999999886544 444667889999999 99988877653 3788888766 42
Q ss_pred EEeEEEeccc--cceEEEEEe--CCEEEEEcC-C----CeEEEEeCCCCceeecCccCCC-------CceEEEEcCCcEE
Q psy12614 293 VRSVNRVIHE--GDVKSLALH--GNRLYSGGL-D----SYLSLSYYPPKTLVKYPCTLAQ-------STPVSLAKDIQHV 356 (708)
Q Consensus 293 ~~~~~~~~~~--~~v~~l~~~--~~~l~s~~~-d----~~i~iw~~~~~~~~~~~~~~~~-------~~~~~~s~~~~~l 356 (708)
...+..+. ..+...+|+ |+.|+..+. + ..|.+||+.++....+. .... .....|+|||+.+
T Consensus 228 --~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~-~~~~~~~~~~~~~~~~~spdg~~l 304 (388)
T 3pe7_A 228 --MRKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLT-SMPACSHLMSNYDGSLMVGDGSDA 304 (388)
T ss_dssp --CEESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEE-EECCEEEEEECTTSSEEEEEECCC
T ss_pred --eEEeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEE-cCCCceeeeecCCCCeEccCCCcc
Confidence 22333333 246778888 666655433 2 24999999988754443 1111 3345899999988
Q ss_pred EEE----------cCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCC-----------ceEEEEeCCCC
Q psy12614 357 LLQ----------YTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNA-----------TIRCSVVSNDG 415 (708)
Q Consensus 357 ~~~----------~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~i~~~~~s~~g 415 (708)
+.. .+..|.+|++.+++ +..+. .+.. .+.+++|+|||
T Consensus 305 ~~~~~~~~~~~~~~~~~i~~~d~~~~~---------------------~~~l~-~~~~~~~~~~~~~~~~~~~~~~spDg 362 (388)
T 3pe7_A 305 PVDVQDDSGYKIENDPFLYVFNMKNGT---------------------QHRVA-RHDTSWKVFEGDRQVTHPHPSFTPDD 362 (388)
T ss_dssp ------------CCCCEEEEEETTTTE---------------------EEEEE-ECCCCCCCBTTBSSTTCCCCEECTTS
T ss_pred eeEeeeccccccCCCCEEEEEeccCCc---------------------eEEec-cccCcccccccccccCCCCccCCCCC
Confidence 753 34579999988754 22222 2333 46788999999
Q ss_pred cEEEE-Ec-CCceEEEEEEe
Q psy12614 416 KYVAY-ST-ESCVRLHSLDL 433 (708)
Q Consensus 416 ~~l~~-~~-d~~i~i~~~~~ 433 (708)
+.|++ +. ++...||.++.
T Consensus 363 ~~l~~~s~~~g~~~l~~~~l 382 (388)
T 3pe7_A 363 KQILFTSDVHGKPALYLATL 382 (388)
T ss_dssp SEEEEEECTTSSCEEEEEEC
T ss_pred CEEEEEecCCCceeEEEEEC
Confidence 99987 44 78888888764
|
| >3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp} | Back alignment and structure |
|---|
Probab=99.83 E-value=3.8e-19 Score=181.13 Aligned_cols=284 Identities=10% Similarity=0.024 Sum_probs=197.3
Q ss_pred eeeeeccCCCCcEEE-----EEEcCCCCEEEEEeC-CCc--EEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEE
Q psy12614 17 HNIKFYAPEPKVINC-----IACEPKSSRLAVSRA-DQS--IEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFS 86 (708)
Q Consensus 17 ~~~~~~~~h~~~v~~-----~~~s~~~~~la~~~~-dg~--v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s 86 (708)
...+.+..|+..... .+|||||++||+++. +|. |.+||+.+++... ...++. ..+..++|+ ++.|+.
T Consensus 21 ~~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~-lt~~~~--~~~~~~~~spdg~~l~~ 97 (388)
T 3pe7_A 21 AQVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQ-LTEGRG--DNTFGGFLSPDDDALFY 97 (388)
T ss_dssp CEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEE-CCCSSC--BCSSSCEECTTSSEEEE
T ss_pred cceEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEE-eeeCCC--CCccceEEcCCCCEEEE
Confidence 345566777777766 899999999999887 664 8888998887654 555555 555567899 889999
Q ss_pred EcCCCcEEEEECCCCeEeEEEeecCCceEEEE--EecCCCEEEEEe----------------------CCCcEEEEEccC
Q psy12614 87 GGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLS--VHKKKRLLAAGT----------------------EQGHINLFQISD 142 (708)
Q Consensus 87 ~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~--~s~~~~~la~~~----------------------~d~~i~iwd~~~ 142 (708)
++.++.|.+||+.+++....+..+...+.... ++|++++++... .+..|++||+.+
T Consensus 98 ~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~ 177 (388)
T 3pe7_A 98 VKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKT 177 (388)
T ss_dssp EETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTT
T ss_pred EeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCC
Confidence 99999999999999988877777766665444 489999887532 346799999999
Q ss_pred CcEEEEEecccccccEEEEEECC-CCCEEEEecC------C-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccC
Q psy12614 143 EGLLYEKLLDRQQGRILCTAWHS-SGDYLVTGCA------A-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCAD 214 (708)
Q Consensus 143 ~~~~~~~~~~~~~~~v~~~~~s~-d~~~l~~~~~------d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 214 (708)
++.. .+..+...+..+.|+| ||+.|+.+.. . .|.++|...+.. ..+... .....+..++|+||
T Consensus 178 g~~~---~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~-----~~~~~~~~~~~spd 248 (388)
T 3pe7_A 178 GEST---VILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNM-RKVKTH-----AEGESCTHEFWVPD 248 (388)
T ss_dssp CCEE---EEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCC-EESCCC-----CTTEEEEEEEECTT
T ss_pred CceE---EeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCce-EEeeeC-----CCCcccccceECCC
Confidence 8764 4445667789999999 9999887653 4 788888765543 333221 11246788999999
Q ss_pred CE-EEEEcC-CC----cEEEEeCCCCeeEE--Eeecccc---CeEEEEEeCCCCEEEEE---------ecCCeEEEEEcc
Q psy12614 215 FT-IITGDS-GG----FVRFWDGKTGVQWS--DVKTHKK---DILALTVSEDENYLYCA---------GVDPTVVCFQRT 274 (708)
Q Consensus 215 ~~-l~~~~~-dg----~i~~wd~~~~~~~~--~~~~~~~---~i~~~~~s~~~~~l~~~---------~~dg~i~iw~~~ 274 (708)
|+ ++..+. ++ .|++||+.+++... .+.++.. ....++|+|||+.|+.. ..+..|++||+.
T Consensus 249 g~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~ 328 (388)
T 3pe7_A 249 GSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMK 328 (388)
T ss_dssp SSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETT
T ss_pred CCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEecc
Confidence 96 544332 22 39999999887433 3322110 01223799999988754 446689999998
Q ss_pred CCcccccCCCCCCCCcceEEeEEEecccc-----------ceEEEEEe--CCEEEEEc-CCCeEEEEeC
Q psy12614 275 RKPQVCSTSGPEQGSSVWVRSVNRVIHEG-----------DVKSLALH--GNRLYSGG-LDSYLSLSYY 329 (708)
Q Consensus 275 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-----------~v~~l~~~--~~~l~s~~-~d~~i~iw~~ 329 (708)
+ ++ ...+..+.. .+.+++|+ ++.|+..+ .++...+|.+
T Consensus 329 ~--------~~---------~~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~ 380 (388)
T 3pe7_A 329 N--------GT---------QHRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLA 380 (388)
T ss_dssp T--------TE---------EEEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEE
T ss_pred C--------Cc---------eEEeccccCcccccccccccCCCCccCCCCCCEEEEEecCCCceeEEEE
Confidence 8 53 344555555 57778888 66666554 4666555543
|
| >3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A | Back alignment and structure |
|---|
Probab=99.83 E-value=5.2e-19 Score=190.16 Aligned_cols=264 Identities=9% Similarity=0.038 Sum_probs=183.4
Q ss_pred CCceEEEEEecCCCEEEEEeC-CCcEEEEEccCCcEEEEEeccccc-ccEEEEEECCCCCEEEEecC---C-eEEEEEcC
Q psy12614 111 SGTCWCLSVHKKKRLLAAGTE-QGHINLFQISDEGLLYEKLLDRQQ-GRILCTAWHSSGDYLVTGCA---A-AVRVWDIH 184 (708)
Q Consensus 111 ~~~v~~~~~s~~~~~la~~~~-d~~i~iwd~~~~~~~~~~~~~~~~-~~v~~~~~s~d~~~l~~~~~---d-~i~iwd~~ 184 (708)
..+|++++|+|||++||+++. ||+++||++.+++.. .+..+. ..+..++|+|| +.+++++. + ...+|.+.
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~---~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~ 96 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETV---KLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVN 96 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEE---ECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEE
T ss_pred ccchheeecCCCCCeEEEEEccCCceeEEEEcCCCcE---eeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEe
Confidence 457999999999999999887 999999999877763 455555 68999999999 77777664 3 45555443
Q ss_pred C---CceEEEEEecccCCCCCceeEEEEEEccCC--EEEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEE
Q psy12614 185 K---GHAIHKMSLDKSSKFSKNTAVWCVAFCADF--TIITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYL 259 (708)
Q Consensus 185 ~---~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l 259 (708)
. +... .+.. .......+|+||| .+++.+.++.+.+||+.+++.......+ . .+++|+|||++|
T Consensus 97 ~~~~g~~~-~l~~--------~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~-~--~~~~~spDG~~l 164 (582)
T 3o4h_A 97 TSRPGEEQ-RLEA--------VKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLP-G--FGFVSDIRGDLI 164 (582)
T ss_dssp TTSTTCCE-ECTT--------SCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEES-S--CEEEEEEETTEE
T ss_pred ccCCCccc-cccC--------CCCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCC-C--ceEEECCCCCEE
Confidence 2 3322 3221 1223355777777 3455555556669999988766555433 3 789999999999
Q ss_pred EEEecC----CeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEEEcCCC--eEEEEeCCC
Q psy12614 260 YCAGVD----PTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSGGLDS--YLSLSYYPP 331 (708)
Q Consensus 260 ~~~~~d----g~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~~~d~--~i~iw~~~~ 331 (708)
++++.+ +.|++||+.+ ++ ...+..|...+..++|+ |+.|+++..++ .|++||+.+
T Consensus 165 a~~~~~~~~~~~i~~~d~~~--------g~---------~~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~ 227 (582)
T 3o4h_A 165 AGLGFFGGGRVSLFTSNLSS--------GG---------LRVFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRD 227 (582)
T ss_dssp EEEEEEETTEEEEEEEETTT--------CC---------CEEECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTT
T ss_pred EEEEEcCCCCeEEEEEcCCC--------CC---------ceEeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCC
Confidence 988777 7899999988 64 34566777777888887 67777666676 666666655
Q ss_pred CceeecCccCCCCceEEEEcCCcEEEEEcCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEE-
Q psy12614 332 KTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSV- 410 (708)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~- 410 (708)
+... ....+...+..++
T Consensus 228 ~~~~--------------------------------------------------------------~~~~~~~~~~~~~~ 245 (582)
T 3o4h_A 228 GSVE--------------------------------------------------------------DLELPSKDFSSYRP 245 (582)
T ss_dssp CCEE--------------------------------------------------------------ECCCSCSHHHHHCC
T ss_pred CcEE--------------------------------------------------------------EccCCCcChhhhhh
Confidence 4322 1122333334444
Q ss_pred -------eCCCCcEEEEEc-CCceEEEEEEecCCcceeEEeecCCcccccceeEEEEEecCCCeEEEEecCCc---EEEe
Q psy12614 411 -------VSNDGKYVAYST-ESCVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVLISADSTLLLAVSLNGP---LYII 479 (708)
Q Consensus 411 -------~s~~g~~l~~~~-d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~~~~~dg~---i~~~ 479 (708)
|+|||.+++++. ++++++|++ + . ... .+ ...+.+++|+ |++++++++.+.. +|.+
T Consensus 246 ~~~~~~~~spdg~~~~~~~~~g~~~l~~~--g--~--~~~---~~----~~~v~~~~~s-dg~~l~~~s~~~~p~~l~~~ 311 (582)
T 3o4h_A 246 TAITWLGYLPDGRLAVVARREGRSAVFID--G--E--RVE---AP----QGNHGRVVLW-RGKLVTSHTSLSTPPRIVSL 311 (582)
T ss_dssp SEEEEEEECTTSCEEEEEEETTEEEEEET--T--E--EEC---CC----SSEEEEEEEE-TTEEEEEEEETTEEEEEEEE
T ss_pred ccccceeEcCCCcEEEEEEcCCcEEEEEE--C--C--eec---cC----CCceEEEEec-CCEEEEEEcCCCCCCeEEEE
Confidence 999997777654 999999998 1 1 111 11 1256679999 9999998888876 8888
Q ss_pred cCCC
Q psy12614 480 DLSS 483 (708)
Q Consensus 480 ~~~~ 483 (708)
+...
T Consensus 312 d~~~ 315 (582)
T 3o4h_A 312 PSGE 315 (582)
T ss_dssp TTCC
T ss_pred cCCC
Confidence 7653
|
| >1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1 | Back alignment and structure |
|---|
Probab=99.83 E-value=8e-19 Score=176.43 Aligned_cols=248 Identities=8% Similarity=0.035 Sum_probs=173.3
Q ss_pred CCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCC-CCCeEEEEEecCCCCCcEEEEEEe--CCE--EEEEc-----------
Q psy12614 25 EPKVINCIACEPKSSRLAVSRADQSIEIWDIS-ETPHVDRVFIGDPLSNSIECLTWF--NDR--LFSGG----------- 88 (708)
Q Consensus 25 h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~-~~~~~~~~~~~h~~~~~v~~l~~~--~~~--l~s~~----------- 88 (708)
+...+..++|+|||++|++++.+ .|.+|++. +++... ...... .+.+.+++|+ |++ ++++.
T Consensus 38 ~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~-~~~~~~-~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~ 114 (365)
T 1jof_A 38 QDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVH-EASHPI-GGHPRANDADTNTRAIFLLAAKQPPYAVYANPF 114 (365)
T ss_dssp TTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEE-EEEEEC-CSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEE
T ss_pred CCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEE-eeEeec-CCCCccEEECCCCCEEEEEEecCCcceecccee
Confidence 34568899999999999998887 99999997 776543 222111 1234557888 663 44553
Q ss_pred --CCCcEEEEECC-CCeEeEEEee----cCCceEEEEEecCCCEEEEEeC-CCcEEEEEcc-CCcEEEEEecc--ccccc
Q psy12614 89 --LQGFVNEYDMR-RLNIKSSTAV----TSGTCWCLSVHKKKRLLAAGTE-QGHINLFQIS-DEGLLYEKLLD--RQQGR 157 (708)
Q Consensus 89 --~d~~i~vwd~~-~~~~~~~~~~----~~~~v~~~~~s~~~~~la~~~~-d~~i~iwd~~-~~~~~~~~~~~--~~~~~ 157 (708)
.+|.+.+|++. .++....+.. +...+.+++|+|||++|+++.. ++.|++|++. +++......+. .+...
T Consensus 115 ~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~ 194 (365)
T 1jof_A 115 YKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDH 194 (365)
T ss_dssp SSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCC
T ss_pred ecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCC
Confidence 68999999997 4665544442 4568999999999998887664 6799999998 77764323332 23567
Q ss_pred EEEEEECCCCCEEEEecC-C-eEEEEEcC--CCceEE---EEEecccCCCCCce------eEEEEE-EccCCE-EEEEcC
Q psy12614 158 ILCTAWHSSGDYLVTGCA-A-AVRVWDIH--KGHAIH---KMSLDKSSKFSKNT------AVWCVA-FCADFT-IITGDS 222 (708)
Q Consensus 158 v~~~~~s~d~~~l~~~~~-d-~i~iwd~~--~~~~~~---~~~~~~~~~~~~~~------~v~~~~-~~~~~~-l~~~~~ 222 (708)
+..++|+|||++|++++. + .|.+|++. +++... .+........++.. .+..++ |+|||+ +++++.
T Consensus 195 p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~ 274 (365)
T 1jof_A 195 PRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSR 274 (365)
T ss_dssp EEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEE
T ss_pred CCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECC
Confidence 899999999999988775 4 89999765 565432 22221100000111 588999 999996 555443
Q ss_pred C-C-----cEEEEeCC-CCeeEE---EeeccccCeEEEEEeC---CCCEEEEEecC-CeEEEEEccC
Q psy12614 223 G-G-----FVRFWDGK-TGVQWS---DVKTHKKDILALTVSE---DENYLYCAGVD-PTVVCFQRTR 275 (708)
Q Consensus 223 d-g-----~i~~wd~~-~~~~~~---~~~~~~~~i~~~~~s~---~~~~l~~~~~d-g~i~iw~~~~ 275 (708)
+ + .|.+|++. +++... ....+...+..++|+| ||++|++++.+ +.|.+|++..
T Consensus 275 ~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~ 341 (365)
T 1jof_A 275 ANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKD 341 (365)
T ss_dssp ESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEET
T ss_pred CCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEch
Confidence 2 2 89999986 566543 2333455677899999 89999999875 8999999986
|
| >2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A | Back alignment and structure |
|---|
Probab=99.82 E-value=7.8e-18 Score=172.26 Aligned_cols=251 Identities=14% Similarity=0.094 Sum_probs=172.0
Q ss_pred CcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCC-----------cEEEE--Eeccccccc
Q psy12614 91 GFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDE-----------GLLYE--KLLDRQQGR 157 (708)
Q Consensus 91 ~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~-----------~~~~~--~~~~~~~~~ 157 (708)
+.+++|+.... .....+..+++++++.++++++.++ +++|+.... ..... .....+...
T Consensus 23 ~~vri~~~~~~-------~~~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (434)
T 2oit_A 23 KKVRIFDSPEE-------LPKERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFP 94 (434)
T ss_dssp CEEECSCCCSS-------CCCSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSC
T ss_pred eeEEecCCccc-------cCCCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCc
Confidence 45777764321 1234688999999999999999888 899886421 11100 001134567
Q ss_pred EEEEEECCCCCEEE----EecCC-eEEEEEcCCC--------ceEEEEEecccCCCCCceeEEEEEEccC-C-EEEEEcC
Q psy12614 158 ILCTAWHSSGDYLV----TGCAA-AVRVWDIHKG--------HAIHKMSLDKSSKFSKNTAVWCVAFCAD-F-TIITGDS 222 (708)
Q Consensus 158 v~~~~~s~d~~~l~----~~~~d-~i~iwd~~~~--------~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~-~l~~~~~ 222 (708)
|.+++|+|++++|+ +++.| .|++||+.++ +.+..+.... +|...|.+++|+|+ + .+++++.
T Consensus 95 v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~----~h~~~V~~v~~~p~~~~~las~s~ 170 (434)
T 2oit_A 95 IHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLK----DAGGMVIDMKWNPTVPSMVAVCLA 170 (434)
T ss_dssp EEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCC----SGGGSEEEEEECSSCTTEEEEEET
T ss_pred ccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccC----CCCCceEEEEECCCCCCEEEEEEC
Confidence 99999999999999 77888 9999998765 3333333321 34889999999998 4 4889999
Q ss_pred CCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEec--
Q psy12614 223 GGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVI-- 300 (708)
Q Consensus 223 dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-- 300 (708)
||.|++||++++..+....+|...|.+++|+|+|++|++|+.||.|++||.+. . ....+..
T Consensus 171 Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~~--------~---------~~~~~~~~~ 233 (434)
T 2oit_A 171 DGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPTL--------Q---------EKKVIPCPP 233 (434)
T ss_dssp TSCEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTTC--------C---------EEEEECCCT
T ss_pred CCeEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccCC--------c---------ccccccCCc
Confidence 99999999999977777777899999999999999999999999999999873 1 1222222
Q ss_pred -----cccceEEEEEe-CCEEE-E-EcCCC------eEEEEeCCCCc------eeecCcc-----CCCCceEEEE--cCC
Q psy12614 301 -----HEGDVKSLALH-GNRLY-S-GGLDS------YLSLSYYPPKT------LVKYPCT-----LAQSTPVSLA--KDI 353 (708)
Q Consensus 301 -----~~~~v~~l~~~-~~~l~-s-~~~d~------~i~iw~~~~~~------~~~~~~~-----~~~~~~~~~s--~~~ 353 (708)
|...|.+++|+ ...++ + ...|| .+++|++.... ...+..+ ....+.+.+. ++.
T Consensus 234 ~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~dw 313 (434)
T 2oit_A 234 FYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKKEEKHPEIFVNFMEPCYGSCTERQHHYYLSYIEEW 313 (434)
T ss_dssp TCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCTTTCCCCEEEECCCSSCCCCSSSCCCEEEEEEGGG
T ss_pred ccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccCCCCCCcceEecccCCCCCCCCcCcceeeehhccC
Confidence 23478999999 44333 2 33332 48999997642 2222211 1122233444 777
Q ss_pred cEEEEE--cCCeEEEEEec
Q psy12614 354 QHVLLQ--YTSHLELWSLG 370 (708)
Q Consensus 354 ~~l~~~--~~~~i~i~~~~ 370 (708)
++++++ ....+.+....
T Consensus 314 ~l~~v~s~~s~dv~vl~~~ 332 (434)
T 2oit_A 314 DLVLAASAASTEVSILARQ 332 (434)
T ss_dssp TEEEEEETTCSBCEEEEEC
T ss_pred CEEEEecCCCCceeEEEec
Confidence 777664 33445555543
|
| >4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ... | Back alignment and structure |
|---|
Probab=99.82 E-value=3.9e-18 Score=188.25 Aligned_cols=306 Identities=9% Similarity=0.030 Sum_probs=202.3
Q ss_pred CcEEEEEEe--CCEEEEEcCCCcEEEEECCCCeEeEEEeecCCc-----eEEEEEecCCCEEEEEeCC---------CcE
Q psy12614 72 NSIECLTWF--NDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGT-----CWCLSVHKKKRLLAAGTEQ---------GHI 135 (708)
Q Consensus 72 ~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~-----v~~~~~s~~~~~la~~~~d---------~~i 135 (708)
....+++|+ +.+++++ |++|++||+.++++...+..|... ...++|||||++|++++.+ +.+
T Consensus 17 ~~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~ 94 (740)
T 4a5s_A 17 LKLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASY 94 (740)
T ss_dssp CCCCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEE
T ss_pred ccccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEE
Confidence 345688999 6666665 999999999999988888877643 2347899999999998875 567
Q ss_pred EEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCCeEEEEEcCCCceEEEEEecccCCCCCceeE---------
Q psy12614 136 NLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAAAVRVWDIHKGHAIHKMSLDKSSKFSKNTAV--------- 206 (708)
Q Consensus 136 ~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v--------- 206 (708)
.+||+.+++. ..+..+.+.+..++|||||+.||.+..+.|++|++.+++..+ +... +....+
T Consensus 95 ~~~d~~~~~~---~~l~~~~~~~~~~~~SPdG~~la~~~~~~i~~~~~~~~~~~~-lt~~-----g~~~~~~~g~~~~v~ 165 (740)
T 4a5s_A 95 DIYDLNKRQL---ITEERIPNNTQWVTWSPVGHKLAYVWNNDIYVKIEPNLPSYR-ITWT-----GKEDIIYNGITDWVY 165 (740)
T ss_dssp EEEETTTTEE---CCSSCCCTTEEEEEECSSTTCEEEEETTEEEEESSTTSCCEE-CCSC-----CBTTTEEESBCCHHH
T ss_pred EEEECCCCcE---EEcccCCCcceeeEECCCCCEEEEEECCeEEEEECCCCceEE-EcCC-----CCccceecCcccccc
Confidence 7999999987 457777888999999999999999865599999998887543 2221 111112
Q ss_pred --------EEEEEccCCE-EEEEcCC------------------------------------CcEEEEeCCC---Ce--e
Q psy12614 207 --------WCVAFCADFT-IITGDSG------------------------------------GFVRFWDGKT---GV--Q 236 (708)
Q Consensus 207 --------~~~~~~~~~~-l~~~~~d------------------------------------g~i~~wd~~~---~~--~ 236 (708)
..+.|+|||+ |+.+..| ..|++||+.+ ++ .
T Consensus 166 ~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~ 245 (740)
T 4a5s_A 166 EEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNAT 245 (740)
T ss_dssp HHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCC
T ss_pred cchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcce
Confidence 3489999996 6655321 1588899988 73 2
Q ss_pred EEEee------ccccCeEEEEEeCCCCEEEEEec----CCeEEEEEccCCcccccCCCCCCCCcceEE--eEE--Eeccc
Q psy12614 237 WSDVK------THKKDILALTVSEDENYLYCAGV----DPTVVCFQRTRKPQVCSTSGPEQGSSVWVR--SVN--RVIHE 302 (708)
Q Consensus 237 ~~~~~------~~~~~i~~~~~s~~~~~l~~~~~----dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~--~~~--~~~~~ 302 (708)
...+. ++...+..++|+|||+.++.... +..|++||+.+ |+ ..|.. ... -..|.
T Consensus 246 ~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~t--------g~----~~~~~~~~~~l~~~~~~ 313 (740)
T 4a5s_A 246 SIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDE--------SS----GRWNCLVARQHIEMSTT 313 (740)
T ss_dssp EEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEET--------TT----TEEEECGGGCEEEECSS
T ss_pred EEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCC--------Cc----cccceeEEEEeeeccCC
Confidence 23333 37778999999999987765543 23799999988 42 00100 011 13444
Q ss_pred cceE-----EEEEe--CCEEE-EEc-CC--CeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEE-EcC-----CeEE
Q psy12614 303 GDVK-----SLALH--GNRLY-SGG-LD--SYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLL-QYT-----SHLE 365 (708)
Q Consensus 303 ~~v~-----~l~~~--~~~l~-s~~-~d--~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~-~~~-----~~i~ 365 (708)
..|. ...|+ |+.++ ..+ .+ ..|.+|++.++....+....-.... .+.+|++.++. +.. +...
T Consensus 314 ~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~~~lT~g~~~v~~-~~~~d~~~i~f~~~~~~~~~~~~~ 392 (740)
T 4a5s_A 314 GWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDCTFITKGTWEVIG-IEALTSDYLYYISNEYKGMPGGRN 392 (740)
T ss_dssp SCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSSCEESCCSSSCEEE-EEEECSSEEEEEESCGGGCTTCBE
T ss_pred ceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCCceEecccCCEEEEE-EEEEeCCEEEEEEecCCCCCceeE
Confidence 4443 67788 67666 554 33 3688889988877766622222222 23355766665 332 2345
Q ss_pred EEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEe----cCCCceEEEEeCCCCcEEEE
Q psy12614 366 LWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSA----VNNATIRCSVVSNDGKYVAY 420 (708)
Q Consensus 366 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~i~~~~~s~~g~~l~~ 420 (708)
||.+.... ........ ........+.|||+|++++.
T Consensus 393 ly~v~~~g-------------------~~~~~~lt~~~~~~~~~~~~~~~S~dg~~~~~ 432 (740)
T 4a5s_A 393 LYKIQLID-------------------YTKVTCLSCELNPERCQYYSVSFSKEAKYYQL 432 (740)
T ss_dssp EEEEETTE-------------------EEEEEESSTTTSTTTBCBEEEEECTTSSEEEE
T ss_pred EEEEECCC-------------------CCcceeeccccCCCCCceEEEEECCCCCEEEE
Confidence 55544311 01111111 12356788999999998886
|
| >1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B* | Back alignment and structure |
|---|
Probab=99.81 E-value=1.1e-17 Score=167.69 Aligned_cols=273 Identities=10% Similarity=0.001 Sum_probs=181.9
Q ss_pred EEEe--CCEEEEEcCCCcEEEEECCCCeEeEEEeecC-CceEEEEEecCCCEEEE-EeCCCcEEEEEccCCcEEEEEecc
Q psy12614 77 LTWF--NDRLFSGGLQGFVNEYDMRRLNIKSSTAVTS-GTCWCLSVHKKKRLLAA-GTEQGHINLFQISDEGLLYEKLLD 152 (708)
Q Consensus 77 l~~~--~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~-~~v~~~~~s~~~~~la~-~~~d~~i~iwd~~~~~~~~~~~~~ 152 (708)
++++ +..+++++.+++|.+||+.+++.+..+..+. ..+..++|+|+++++++ ...++.|.+||+.+++........
T Consensus 5 ~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~ 84 (349)
T 1jmx_B 5 PALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLS 84 (349)
T ss_dssp CCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESC
T ss_pred ccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcc
Confidence 3455 5677888999999999999999888887543 25789999999987654 456899999999998876322222
Q ss_pred cc----cccEEEEEECCCCCEEEEec-------------CCeEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCC
Q psy12614 153 RQ----QGRILCTAWHSSGDYLVTGC-------------AAAVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADF 215 (708)
Q Consensus 153 ~~----~~~v~~~~~s~d~~~l~~~~-------------~d~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 215 (708)
.. ...+..++|+|||++|++++ .+.|.+||+.+++....+... .....+.+++|+|||
T Consensus 85 ~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~-----~~~~~~~~~~~s~dg 159 (349)
T 1jmx_B 85 SVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTF-----PMPRQVYLMRAADDG 159 (349)
T ss_dssp CSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEE-----ECCSSCCCEEECTTS
T ss_pred cccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeec-----cCCCcccceeECCCC
Confidence 11 23377899999999998877 248999999885443222111 113357889999999
Q ss_pred EEEEEcCCCcEEEEeCCCCeeEEEeecccc------------------------CeEEEEEeCCCCEEEEEec-CCeEEE
Q psy12614 216 TIITGDSGGFVRFWDGKTGVQWSDVKTHKK------------------------DILALTVSEDENYLYCAGV-DPTVVC 270 (708)
Q Consensus 216 ~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~------------------------~i~~~~~s~~~~~l~~~~~-dg~i~i 270 (708)
++++++ +.|.+||..+++.+..+..+.. ....+++++++........ ...+..
T Consensus 160 ~l~~~~--~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 237 (349)
T 1jmx_B 160 SLYVAG--PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLS 237 (349)
T ss_dssp CEEEES--SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEE
T ss_pred cEEEcc--CcEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEE
Confidence 866654 4499999999988777653320 2344666655422211111 112223
Q ss_pred EEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe---CCEEEEEcCCCeEEEEeCCCCceeecCccCCCCceE
Q psy12614 271 FQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH---GNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPV 347 (708)
Q Consensus 271 w~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~---~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~ 347 (708)
++..+ ++ ........+...+.+++++ ++.++++ ++.|.+||+.+...............+
T Consensus 238 ~~~~~--------~~-------~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~~~~~~~ 300 (349)
T 1jmx_B 238 VDLKT--------GK-------THTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANLDHTYYCV 300 (349)
T ss_dssp EETTT--------CC-------EEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEECSSCCCEE
T ss_pred EeccC--------Cc-------EEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcCCCCccce
Confidence 55554 32 1122223345567777776 5677777 889999999987754333233456789
Q ss_pred EEEcCCcEEEEE-cCCeEEEEEecCCC
Q psy12614 348 SLAKDIQHVLLQ-YTSHLELWSLGSAQ 373 (708)
Q Consensus 348 ~~s~~~~~l~~~-~~~~i~i~~~~~~~ 373 (708)
+++|+++.++++ .++.|.+||..+.+
T Consensus 301 ~~s~dg~~l~~~~~~~~v~v~d~~~~~ 327 (349)
T 1jmx_B 301 AFDKKGDKLYLGGTFNDLAVFNPDTLE 327 (349)
T ss_dssp EECSSSSCEEEESBSSEEEEEETTTTE
T ss_pred EECCCCCEEEEecCCCeEEEEeccccc
Confidence 999999877764 67899999998755
|
| >3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A | Back alignment and structure |
|---|
Probab=99.80 E-value=1.2e-17 Score=182.68 Aligned_cols=286 Identities=8% Similarity=-0.020 Sum_probs=202.3
Q ss_pred eccCCCCcEEEEEEcCCCCEEEEE--eCCCcEEEEeCCCCCeEEEEEecCCCCCcEE---------EEEEe----CCE-E
Q psy12614 21 FYAPEPKVINCIACEPKSSRLAVS--RADQSIEIWDISETPHVDRVFIGDPLSNSIE---------CLTWF----NDR-L 84 (708)
Q Consensus 21 ~~~~h~~~v~~~~~s~~~~~la~~--~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~---------~l~~~----~~~-l 84 (708)
.+.+|...|..++|++++.+++.. +.++...||....+.... .+..|. ..+. ...|+ |+. |
T Consensus 18 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~l~~~~--~~~~~~~~~~~~~~~~~~~SPDg~~~l 94 (662)
T 3azo_A 18 LVASRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEE-SALPAP--WNVRNRVFEYSGFPWAGVPRPAGGPLL 94 (662)
T ss_dssp HHHHTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCEE-ESSCTT--CCBCCCGGGTCCCCEEEECCSSSSCEE
T ss_pred HHhhcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCcc-eeCCCC--ccccccccccCCccceeeeecCCCeEE
Confidence 466789999999999887677776 557889999965444444 677776 5555 55555 777 6
Q ss_pred EEEc-CCCcEEEEECC--C-CeEeEEEee-----cCCceEEEEEecCCCEEEEEeCC----------CcEEEEEccC---
Q psy12614 85 FSGG-LQGFVNEYDMR--R-LNIKSSTAV-----TSGTCWCLSVHKKKRLLAAGTEQ----------GHINLFQISD--- 142 (708)
Q Consensus 85 ~s~~-~d~~i~vwd~~--~-~~~~~~~~~-----~~~~v~~~~~s~~~~~la~~~~d----------~~i~iwd~~~--- 142 (708)
+.++ .+..|.+|++. + ++ ...+.. |...+.+++|+|||+.|++++.+ ..|++||+.+
T Consensus 95 a~~~~~~~~l~~~~~~~~g~~~-~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 173 (662)
T 3azo_A 95 VFTHFGDQRLYAFEPDAPGGAV-PRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAA 173 (662)
T ss_dssp EEEBTTTCCEEEECTTSTTCCC-CEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTT
T ss_pred EEEECCCCeEEEEcCCCCCCCC-CEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCcc
Confidence 6554 36677777776 3 33 444554 66788999999999999998876 5899999988
Q ss_pred ---CcEEEEEecc-cccccEEEEEECCCCCEEEEecC--------C-eEEEEEcC-CCc--eEEEEEecccCCCCCceeE
Q psy12614 143 ---EGLLYEKLLD-RQQGRILCTAWHSSGDYLVTGCA--------A-AVRVWDIH-KGH--AIHKMSLDKSSKFSKNTAV 206 (708)
Q Consensus 143 ---~~~~~~~~~~-~~~~~v~~~~~s~d~~~l~~~~~--------d-~i~iwd~~-~~~--~~~~~~~~~~~~~~~~~~v 206 (708)
++. ..+. .+...+..++|||||++|+.++. . .|.+||+. +++ ....+... +...+
T Consensus 174 ~~~~~~---~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~------~~~~~ 244 (662)
T 3azo_A 174 ADRSAV---RELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGG------PEEAI 244 (662)
T ss_dssp TCGGGS---EESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEE------TTBCE
T ss_pred ccCCce---eEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCC------CCceE
Confidence 665 3455 55677889999999999987762 3 79999998 562 33344332 15678
Q ss_pred EEEEEccCCE-EEEEcCCC--cEEEEeCCCCeeEEEeeccccC--------eEEEEEeCCCCEEEEEecCCeEEEEEc--
Q psy12614 207 WCVAFCADFT-IITGDSGG--FVRFWDGKTGVQWSDVKTHKKD--------ILALTVSEDENYLYCAGVDPTVVCFQR-- 273 (708)
Q Consensus 207 ~~~~~~~~~~-l~~~~~dg--~i~~wd~~~~~~~~~~~~~~~~--------i~~~~~s~~~~~l~~~~~dg~i~iw~~-- 273 (708)
..++|+|||+ +++++.++ .|.+||+.+++.......+... +..++|+|++++++++.. +.+++|.+
T Consensus 245 ~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~ 323 (662)
T 3azo_A 245 AQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDP 323 (662)
T ss_dssp EEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEET
T ss_pred cceEECCCCeEEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEEC
Confidence 9999999997 55666777 6777887677665544433222 567899999999999988 99999944
Q ss_pred cCCcccccCCCCCCCCcceEEeEEEeccccceEEE-EEeCCE-EEE-EcCCC--eEEEEeCCCCceeec
Q psy12614 274 TRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSL-ALHGNR-LYS-GGLDS--YLSLSYYPPKTLVKY 337 (708)
Q Consensus 274 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l-~~~~~~-l~s-~~~d~--~i~iw~~~~~~~~~~ 337 (708)
.+ + ....+..|...+..+ +++++. +++ ++.+. .+.++++.++....+
T Consensus 324 ~~--------~---------~~~~l~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~l 375 (662)
T 3azo_A 324 ES--------G---------ELVDAAGPWTEWAATLTVSGTRAVGVAASPRTAYEVVELDTVTGRARTI 375 (662)
T ss_dssp TT--------T---------EEEECCSSCCEEEEEEEEETTEEEEEEEETTEEEEEEEEETTTCCEEEE
T ss_pred CC--------C---------cEEEecCCCCeEEEEEecCCCEEEEEEcCCCCCCEEEEEECCCCceEEe
Confidence 44 3 345566777778877 677443 333 34444 455667767665544
|
| >3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=3.7e-17 Score=161.49 Aligned_cols=239 Identities=12% Similarity=0.008 Sum_probs=183.3
Q ss_pred CCcEEEEEEcCCCCEEEEEeCC------------------------CcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe-
Q psy12614 26 PKVINCIACEPKSSRLAVSRAD------------------------QSIEIWDISETPHVDRVFIGDPLSNSIECLTWF- 80 (708)
Q Consensus 26 ~~~v~~~~~s~~~~~la~~~~d------------------------g~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~- 80 (708)
-+.+.+++++|+|+++++...+ +.|.+||..+++.+...-.++. .....++++
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~--~~p~gia~d~ 100 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLF--YLPHGLSIDT 100 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTC--SSEEEEEECT
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCcc--CCceEEEECC
Confidence 4679999999999999888776 4799999999887652223444 689999999
Q ss_pred -CCEEEEEcCCCcEEEEECCCCe-EeEEEe---------ecCCceEEEEEec-CCCEEEEEe-CCCcEEEEEccCCcEEE
Q psy12614 81 -NDRLFSGGLQGFVNEYDMRRLN-IKSSTA---------VTSGTCWCLSVHK-KKRLLAAGT-EQGHINLFQISDEGLLY 147 (708)
Q Consensus 81 -~~~l~s~~~d~~i~vwd~~~~~-~~~~~~---------~~~~~v~~~~~s~-~~~~la~~~-~d~~i~iwd~~~~~~~~ 147 (708)
|+.+++...++.|++||..... .+..+. .+-.....++++| ++.++++.+ .++.|++|+ .++...
T Consensus 101 ~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~- 178 (329)
T 3fvz_A 101 DGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFV- 178 (329)
T ss_dssp TSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTSCEE-
T ss_pred CCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEE-
Confidence 7778888889999999986643 455552 3344689999999 788777775 689999999 455554
Q ss_pred EEecc----------cccccEEEEEECCC-CCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCC
Q psy12614 148 EKLLD----------RQQGRILCTAWHSS-GDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADF 215 (708)
Q Consensus 148 ~~~~~----------~~~~~v~~~~~s~d-~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 215 (708)
..+. ++-.....++++|+ +..+++...+ .|++||..+|+.+..+... .....+..++|+| +
T Consensus 179 -~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~-----~~~~~~~~~~~~p-g 251 (329)
T 3fvz_A 179 -TQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHA-----SFGRNVFAISYIP-G 251 (329)
T ss_dssp -EEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCT-----TTTTCEEEEEEET-T
T ss_pred -EEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEecc-----ccCCCcceeeecC-C
Confidence 3332 12234889999999 6666666666 9999999989998887644 2356688999999 5
Q ss_pred E-EEE-------EcCCCcEEEEeCCCCeeEEEee---ccccCeEEEEEeCCCCEEEEEecCCeEEEEEccC
Q psy12614 216 T-IIT-------GDSGGFVRFWDGKTGVQWSDVK---THKKDILALTVSEDENYLYCAGVDPTVVCFQRTR 275 (708)
Q Consensus 216 ~-l~~-------~~~dg~i~~wd~~~~~~~~~~~---~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~ 275 (708)
. +++ ...+..|++||..+++.+..+. ++...+..++++|+|+.+++...++.|++|++..
T Consensus 252 ~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 252 FLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp EEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEEE
T ss_pred EEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCCc
Confidence 3 222 2334589999999999988873 5667789999999997777888889999999875
|
| >1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1 | Back alignment and structure |
|---|
Probab=99.78 E-value=5.9e-16 Score=149.88 Aligned_cols=238 Identities=10% Similarity=0.108 Sum_probs=175.6
Q ss_pred CCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEe------cCCCCCcEEEEEEe--CCEEEEEc-C-CCcE
Q psy12614 24 PEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFI------GDPLSNSIECLTWF--NDRLFSGG-L-QGFV 93 (708)
Q Consensus 24 ~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~------~h~~~~~v~~l~~~--~~~l~s~~-~-d~~i 93 (708)
++-..+.+++++|+++++++...++.|.+||.. ++.+. .+. ++. ..+.++++. +..|++++ . ++.|
T Consensus 27 g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~-~~~~~~~~~~~~--~~p~~i~~~~~~g~l~v~~~~~~~~i 102 (286)
T 1q7f_A 27 GQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKF-QFGECGKRDSQL--LYPNRVAVVRNSGDIIVTERSPTHQI 102 (286)
T ss_dssp TCBSCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEE-EECCBSSSTTCB--SSEEEEEEETTTTEEEEEECGGGCEE
T ss_pred CccCCCceEEECCCCCEEEEECCCCEEEEECCC-CcEEE-EecccCCCcccc--cCceEEEEEcCCCeEEEEcCCCCCEE
Confidence 455789999999999988888888999999987 55444 443 233 578999994 45555554 3 8999
Q ss_pred EEEECCCCeEeEEEe-ecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEE
Q psy12614 94 NEYDMRRLNIKSSTA-VTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVT 172 (708)
Q Consensus 94 ~vwd~~~~~~~~~~~-~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~ 172 (708)
.+|| .+++.+..+. .+...+.+++++|+|+++++...++.|.+||.. ++.........+...+..++++|+|+.+++
T Consensus 103 ~~~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~ 180 (286)
T 1q7f_A 103 QIYN-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQEIFIS 180 (286)
T ss_dssp EEEC-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECSSSEEEEE
T ss_pred EEEC-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCccCCcEEEEECCCCCEEEE
Confidence 9999 5667666664 334578999999999988777778999999965 444321222234456899999999997777
Q ss_pred ecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEE-EEEcCCC-cEEEEeCCCCeeEEEeecccc--Ce
Q psy12614 173 GCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTI-ITGDSGG-FVRFWDGKTGVQWSDVKTHKK--DI 247 (708)
Q Consensus 173 ~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l-~~~~~dg-~i~~wd~~~~~~~~~~~~~~~--~i 247 (708)
...+ .|.+||. +++.+..+... +....+..++++++|++ ++...++ .|.+||. +++.+..+..+.. .+
T Consensus 181 ~~~~~~i~~~~~-~g~~~~~~~~~-----g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~ 253 (286)
T 1q7f_A 181 DNRAHCVKVFNY-EGQYLRQIGGE-----GITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALESKVKHAQC 253 (286)
T ss_dssp EGGGTEEEEEET-TCCEEEEESCT-----TTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEESSCCSCE
T ss_pred ECCCCEEEEEcC-CCCEEEEEccC-----CccCCCcEEEECCCCCEEEEeCCCCEEEEEECC-CCCEEEEEcccCCCCcc
Confidence 7767 9999997 56666555432 11356889999999974 4555555 9999995 5777777665433 47
Q ss_pred EEEEEeCCCCEEEEEecCCeEEEEEccC
Q psy12614 248 LALTVSEDENYLYCAGVDPTVVCFQRTR 275 (708)
Q Consensus 248 ~~~~~s~~~~~l~~~~~dg~i~iw~~~~ 275 (708)
.+++++|+|+++++ +.++.|++|+...
T Consensus 254 ~~i~~~~~g~l~vs-~~~~~v~v~~~~~ 280 (286)
T 1q7f_A 254 FDVALMDDGSVVLA-SKDYRLYIYRYVQ 280 (286)
T ss_dssp EEEEEETTTEEEEE-ETTTEEEEEECSC
T ss_pred eeEEECCCCcEEEE-CCCCeEEEEEccc
Confidence 79999999976666 6799999999865
|
| >1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1 | Back alignment and structure |
|---|
Probab=99.78 E-value=1.6e-16 Score=159.70 Aligned_cols=274 Identities=11% Similarity=0.073 Sum_probs=178.7
Q ss_pred EEEEEeCC--CcEEEEeC--CCCCeEEE-EEe-cCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECC-CCeEeEEEeec
Q psy12614 40 RLAVSRAD--QSIEIWDI--SETPHVDR-VFI-GDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMR-RLNIKSSTAVT 110 (708)
Q Consensus 40 ~la~~~~d--g~v~iwd~--~~~~~~~~-~~~-~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~-~~~~~~~~~~~ 110 (708)
+|++|+.. +.|.+|++ .+++.... ... +.. ..+..++|+ +++|++++.+ .|.+|++. +++........
T Consensus 4 ~~~vg~~~~~~~i~~~~~d~~~g~l~~~~~~~~~~~--~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~ 80 (365)
T 1jof_A 4 HLMIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQD--EPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHP 80 (365)
T ss_dssp EEEEEESSSSCEEEEEEEETTTTEEEEEEEEECCTT--CCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEE
T ss_pred EEEEEEccCCCcEEEEEEECCCCCEEEeeEEccCCC--CCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEee
Confidence 45666653 46887765 45554221 111 233 468889999 8889988888 99999997 77765443321
Q ss_pred -CCceEEEEEecCCCE--EEEEe-------------CCCcEEEEEcc-CCcEEEEEecc--cccccEEEEEECCCCCEEE
Q psy12614 111 -SGTCWCLSVHKKKRL--LAAGT-------------EQGHINLFQIS-DEGLLYEKLLD--RQQGRILCTAWHSSGDYLV 171 (708)
Q Consensus 111 -~~~v~~~~~s~~~~~--la~~~-------------~d~~i~iwd~~-~~~~~~~~~~~--~~~~~v~~~~~s~d~~~l~ 171 (708)
.+.+.+++|+|||++ ++++. .++.+.+|++. .++........ .+...+.+++|+|||++|+
T Consensus 81 ~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~ 160 (365)
T 1jof_A 81 IGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLY 160 (365)
T ss_dssp CCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEE
T ss_pred cCCCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEE
Confidence 134667899999994 44543 68999999997 46554211111 2456789999999999988
Q ss_pred EecC-C-eEEEEEcC-CCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEc-CCCcEEEEeCC--CCeeE---EE--
Q psy12614 172 TGCA-A-AVRVWDIH-KGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGD-SGGFVRFWDGK--TGVQW---SD-- 239 (708)
Q Consensus 172 ~~~~-d-~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~-~dg~i~~wd~~--~~~~~---~~-- 239 (708)
++.. + .|.+|++. +++.......... .+...+..++|+|||+ +++++ .++.|.+|++. +++.. ..
T Consensus 161 ~~~~~~~~v~~~~~~~~g~~~~~~~~~~~---~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~ 237 (365)
T 1jof_A 161 SADLTANKLWTHRKLASGEVELVGSVDAP---DPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFP 237 (365)
T ss_dssp EEETTTTEEEEEEECTTSCEEEEEEEECS---STTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEE
T ss_pred EEcCCCCEEEEEEECCCCCEEEeeeEecC---CCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEE
Confidence 7764 4 99999998 7765322111100 0145688999999995 55554 47899998764 56542 12
Q ss_pred -eec----ccc------CeEEEE-EeCCCCEEEEEecCC------eEEEEEcc-CCcccccCCCCCCCCcceEEeE-EEe
Q psy12614 240 -VKT----HKK------DILALT-VSEDENYLYCAGVDP------TVVCFQRT-RKPQVCSTSGPEQGSSVWVRSV-NRV 299 (708)
Q Consensus 240 -~~~----~~~------~i~~~~-~s~~~~~l~~~~~dg------~i~iw~~~-~~~~~~~~~g~~~~~~~~~~~~-~~~ 299 (708)
+.. |.. .+..++ |+|||++|++++.+. .|.+|++. + |+ ..... ...
T Consensus 238 ~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~--------g~------~~~~~~~~~ 303 (365)
T 1jof_A 238 LIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDC--------GS------IEKQLFLSP 303 (365)
T ss_dssp SSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTT--------SC------EEEEEEEEE
T ss_pred cCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCC--------CC------EEEeeeeee
Confidence 221 121 478999 999999998776533 89999996 4 43 11111 122
Q ss_pred ccccceEEEEEe-----CCEEEEEcCC-CeEEEEeCCCCc
Q psy12614 300 IHEGDVKSLALH-----GNRLYSGGLD-SYLSLSYYPPKT 333 (708)
Q Consensus 300 ~~~~~v~~l~~~-----~~~l~s~~~d-~~i~iw~~~~~~ 333 (708)
.+...+..++++ +++|++++.+ +.|.+|+++...
T Consensus 304 ~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~~ 343 (365)
T 1jof_A 304 TPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDEF 343 (365)
T ss_dssp CSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETTE
T ss_pred cCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEchhh
Confidence 344445556654 6788888764 899999987654
|
| >2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ... | Back alignment and structure |
|---|
Probab=99.77 E-value=2.8e-16 Score=156.72 Aligned_cols=283 Identities=11% Similarity=0.069 Sum_probs=193.7
Q ss_pred CCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeC----------CCcEEEEEccCCcEEEEEeccc----c
Q psy12614 89 LQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTE----------QGHINLFQISDEGLLYEKLLDR----Q 154 (708)
Q Consensus 89 ~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~----------d~~i~iwd~~~~~~~~~~~~~~----~ 154 (708)
.|+.|.+||..+++.+..+..+..+ .++|+|||++++++.. ++.|.+||..+.+.+....+.. +
T Consensus 29 ~d~~v~v~D~~t~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~ 106 (361)
T 2oiz_A 29 TESRVHVYDYTNGKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQG 106 (361)
T ss_dssp GGCEEEEEETTTCCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCB
T ss_pred ccCeEEEEECCCCeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCcccccc
Confidence 4789999999999988888765554 8999999999998863 5779999999888763322221 1
Q ss_pred cccEEEEEECCCCCEEEEecC--C-eEEEEEcCCCceEEE-EEecccCCCCCceeEEEEEEccCC--EEEEEcCCCcEEE
Q psy12614 155 QGRILCTAWHSSGDYLVTGCA--A-AVRVWDIHKGHAIHK-MSLDKSSKFSKNTAVWCVAFCADF--TIITGDSGGFVRF 228 (708)
Q Consensus 155 ~~~v~~~~~s~d~~~l~~~~~--d-~i~iwd~~~~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~--~l~~~~~dg~i~~ 228 (708)
......++|+|||++|+++.. + .|.+||+.+++.+.. +... ....+.+.|++ .+++.+.||.+.+
T Consensus 107 g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~---------~~~~v~~~p~~~~~~~~~~~dg~~~~ 177 (361)
T 2oiz_A 107 LNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAA---------GCWSVIPQPNRPRSFMTICGDGGLLT 177 (361)
T ss_dssp CCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGT---------TEEEEEECTTSSSEEEEEETTSSEEE
T ss_pred CCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCC---------CcceeEEcCCCCeeEEEECCCCcEEE
Confidence 234567999999999998763 5 899999999988776 4432 12335677876 4888889999999
Q ss_pred EeCCC-CeeEEE------eeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEec-
Q psy12614 229 WDGKT-GVQWSD------VKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVI- 300 (708)
Q Consensus 229 wd~~~-~~~~~~------~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~- 300 (708)
|+... ++.... +.....+ ..+.+++++..++..+.++.+.++|+.. +. ........+..
T Consensus 178 v~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~v~v~d~~~--------~~----~~~~~~~~~~~~ 244 (361)
T 2oiz_A 178 INLGEDGKVASQSRSKQMFSVKDDP-IFIAPALDKDKAHFVSYYGNVYSADFSG--------DE----VKVDGPWSLLND 244 (361)
T ss_dssp EEECTTSSEEEEEECCCCSCTTTSC-BCSCCEECSSEEEEEBTTSEEEEEECSS--------SS----CEEEEEEESCCH
T ss_pred EEECCCCcEeeeccccceEcCCCCc-eEEEecccCCEEEEEeCCCeEEEEEecC--------CC----ceecccccccCc
Confidence 99865 554422 1222222 2334467787888888899999999876 32 11100000000
Q ss_pred ---c----ccceEEEEEe--CCEEEEEcC-----------CCeEEEEeCCCCce-eecCccCCCCceEEEEcCCcEEEEE
Q psy12614 301 ---H----EGDVKSLALH--GNRLYSGGL-----------DSYLSLSYYPPKTL-VKYPCTLAQSTPVSLAKDIQHVLLQ 359 (708)
Q Consensus 301 ---~----~~~v~~l~~~--~~~l~s~~~-----------d~~i~iw~~~~~~~-~~~~~~~~~~~~~~~s~~~~~l~~~ 359 (708)
+ ......++++ ++.++.+.. .+.|.+||+.+.+. ..+.. .. +..++++|||++++++
T Consensus 245 ~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~-~~-p~~ia~spdg~~l~v~ 322 (361)
T 2oiz_A 245 EDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPG-RD-ALSMTIDQQRNLMLTL 322 (361)
T ss_dssp HHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEEC-TT-CCEEEEETTTTEEEEE
T ss_pred cccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEec-CC-eeEEEECCCCCEEEEe
Confidence 0 0111125666 566665532 35899999998874 44442 23 8899999999999987
Q ss_pred cCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCc
Q psy12614 360 YTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGK 416 (708)
Q Consensus 360 ~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~ 416 (708)
..+.|.+||..++. .++.............++++|+|.
T Consensus 323 n~~~v~v~D~~t~~-------------------l~~~~~i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 323 DGGNVNVYDISQPE-------------------PKLLRTIEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp CSSCEEEEECSSSS-------------------CEEEEEETTSCSSEEEEEECCCSC
T ss_pred CCCeEEEEECCCCc-------------------ceeeEEeccCCCCcEEEEecCCCC
Confidence 66999999999862 023333334556678899999985
|
| >3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=99.76 E-value=3.2e-17 Score=167.37 Aligned_cols=292 Identities=8% Similarity=-0.079 Sum_probs=195.2
Q ss_pred EEEECCCCeEeEEEeecCCc-----eEEEEEecCCCEEEEEeCC---CcEEEEEccCCcEEEEEecccccccE-EEEEEC
Q psy12614 94 NEYDMRRLNIKSSTAVTSGT-----CWCLSVHKKKRLLAAGTEQ---GHINLFQISDEGLLYEKLLDRQQGRI-LCTAWH 164 (708)
Q Consensus 94 ~vwd~~~~~~~~~~~~~~~~-----v~~~~~s~~~~~la~~~~d---~~i~iwd~~~~~~~~~~~~~~~~~~v-~~~~~s 164 (708)
...|..+++.+..+..+... +.+++|+|||++|+..... ..|++||+.+++.. .+..+.... ..+.|+
T Consensus 13 ~~~d~~~g~~~~~l~~~~~~~~~~~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~---~l~~~~~~~~~~~~~s 89 (396)
T 3c5m_A 13 TFVDSDTQVKVTRLTPTDIICHRNYFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAV---QLTEGKGDNTFGGFIS 89 (396)
T ss_dssp EEECTTTCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEE---ECCCSSCBCTTTCEEC
T ss_pred eeecCCCCcceEEEecCCCCccceeeecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEE---EeecCCCCccccceEC
Confidence 34577888877777655433 7788999999998887553 46889999988764 333333333 347899
Q ss_pred CCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEE-------------------EEEccCCE-EEEE---
Q psy12614 165 SSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWC-------------------VAFCADFT-IITG--- 220 (708)
Q Consensus 165 ~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~-------------------~~~~~~~~-l~~~--- 220 (708)
|||++|+.++.+ .|.+||+.+++........ ...... +.|+|+++ ++..
T Consensus 90 pdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~-------~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~ 162 (396)
T 3c5m_A 90 TDERAFFYVKNELNLMKVDLETLEEQVIYTVD-------EEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFY 162 (396)
T ss_dssp TTSSEEEEEETTTEEEEEETTTCCEEEEEECC-------TTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHH
T ss_pred CCCCEEEEEEcCCcEEEEECCCCCcEEEEecc-------cccCCCCCEEEeccCCccccccccccccCCCCcceeeeeec
Confidence 999999999888 9999999988765544422 111111 34567775 3322
Q ss_pred --cCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeC-CCCEEEEEecC------CeEEEEEccCCcccccCCCCCCCCcc
Q psy12614 221 --DSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSE-DENYLYCAGVD------PTVVCFQRTRKPQVCSTSGPEQGSSV 291 (708)
Q Consensus 221 --~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~-~~~~l~~~~~d------g~i~iw~~~~~~~~~~~~g~~~~~~~ 291 (708)
..+..|++||+.+++..... .+...+..+.|+| +++.|+..+.+ ..|.+|++.. ++
T Consensus 163 ~~~~~~~l~~~d~~~g~~~~~~-~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~--------~~------ 227 (396)
T 3c5m_A 163 HTNPTCRLIKVDIETGELEVIH-QDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDG--------SN------ 227 (396)
T ss_dssp HTCCCEEEEEEETTTCCEEEEE-EESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTS--------CC------
T ss_pred cCCCcceEEEEECCCCcEEeec-cCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCC--------Cc------
Confidence 45678999999888765444 4667889999999 78877766543 3588888866 32
Q ss_pred eEEeEEEecc--ccceEEEEEe--CCEEEEEcCC-----CeEEEEeCCCCceeecCccCCCCceEEEEc-CCcEEEEEc-
Q psy12614 292 WVRSVNRVIH--EGDVKSLALH--GNRLYSGGLD-----SYLSLSYYPPKTLVKYPCTLAQSTPVSLAK-DIQHVLLQY- 360 (708)
Q Consensus 292 ~~~~~~~~~~--~~~v~~l~~~--~~~l~s~~~d-----~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~-~~~~l~~~~- 360 (708)
...+..+ ...+..++|+ ++.|+.++.+ +.|.+||+.++....+. ...... ..++| +|++++...
T Consensus 228 ---~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~-~~~~~~-~~~s~~dg~~l~~~~~ 302 (396)
T 3c5m_A 228 ---VRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVM-VMPPCS-HLMSNFDGSLMVGDGC 302 (396)
T ss_dssp ---CEESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEE-ECCSEE-EEEECSSSSEEEEEEC
T ss_pred ---eeEeeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEee-eCCCCC-CCccCCCCceEEEecC
Confidence 1222222 2357778898 7767666543 45999999887654443 122222 88999 999888642
Q ss_pred ----------------CCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCC-----------ceEEEEeCC
Q psy12614 361 ----------------TSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNA-----------TIRCSVVSN 413 (708)
Q Consensus 361 ----------------~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~i~~~~~s~ 413 (708)
+..|.+|++.++. ...+. .+.. .+..++|+|
T Consensus 303 ~~p~~~~~~~~~~~~~~~~i~~~d~~~~~---------------------~~~l~-~~~~~~~~~~~~~~~~~~~~~~s~ 360 (396)
T 3c5m_A 303 DAPVDVADADSYNIENDPFLYVLNTKAKS---------------------AQKLC-KHSTSWDVLDGDRQITHPHPSFTP 360 (396)
T ss_dssp CC----------CCCCCCEEEEEETTTTB---------------------CCEEE-ECCCCCCCBTTBSSTTCCCCEECT
T ss_pred CcceeeccccccccCCCCcEEEEecccCc---------------------eEEcc-CCCCccccccccccCCCCCceEcc
Confidence 3679999987654 11111 1222 245678999
Q ss_pred CCcEEEE-Ec-CCceEEEEEEecCCc
Q psy12614 414 DGKYVAY-ST-ESCVRLHSLDLDGDK 437 (708)
Q Consensus 414 ~g~~l~~-~~-d~~i~i~~~~~~~~~ 437 (708)
||+.|++ +. ++...+|.++...+.
T Consensus 361 dg~~l~~~s~~~~~~~l~~~~~~~~~ 386 (396)
T 3c5m_A 361 NDDGVLFTSDFEGVPAIYIADVPESY 386 (396)
T ss_dssp TSSEEEEEECTTSSCEEEEEECCTTC
T ss_pred CCCeEEEEecCCCCceEEEEEEcccc
Confidence 9999887 43 677788887754443
|
| >3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A | Back alignment and structure |
|---|
Probab=99.75 E-value=5.1e-16 Score=169.89 Aligned_cols=279 Identities=9% Similarity=-0.056 Sum_probs=185.4
Q ss_pred EEecCCCCCcEEEEEEeCCEEE--EE--cCCCcEEEEECCCCeEeEEEeecCCceE---------EEEEe--cCCCE-EE
Q psy12614 64 VFIGDPLSNSIECLTWFNDRLF--SG--GLQGFVNEYDMRRLNIKSSTAVTSGTCW---------CLSVH--KKKRL-LA 127 (708)
Q Consensus 64 ~~~~h~~~~~v~~l~~~~~~l~--s~--~~d~~i~vwd~~~~~~~~~~~~~~~~v~---------~~~~s--~~~~~-la 127 (708)
.+.+|. ..+..++|+++.++ +. +.++...||....+.....+..+...+. ..+|+ |||++ |+
T Consensus 18 ~~~~~~--~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la 95 (662)
T 3azo_A 18 LVASRS--GRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLV 95 (662)
T ss_dssp HHHHTC--SCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEE
T ss_pred HHhhcC--CccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCcceeCCCCccccccccccCCccceeeeecCCCeEEE
Confidence 456777 89999999955444 33 4478899999655555666777766666 66666 99998 77
Q ss_pred EEeC-CCcEEEEEcc--C-CcEEEEEeccc-----ccccEEEEEECCCCCEEEEecCC-----------eEEEEEcCC--
Q psy12614 128 AGTE-QGHINLFQIS--D-EGLLYEKLLDR-----QQGRILCTAWHSSGDYLVTGCAA-----------AVRVWDIHK-- 185 (708)
Q Consensus 128 ~~~~-d~~i~iwd~~--~-~~~~~~~~~~~-----~~~~v~~~~~s~d~~~l~~~~~d-----------~i~iwd~~~-- 185 (708)
.++. +..|+++++. + ++. ..+.. |...+..++|+|||+.|++++.+ .|.+||+.+
T Consensus 96 ~~~~~~~~l~~~~~~~~g~~~~---~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 172 (662)
T 3azo_A 96 FTHFGDQRLYAFEPDAPGGAVP---RPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSA 172 (662)
T ss_dssp EEBTTTCCEEEECTTSTTCCCC---EECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTT
T ss_pred EEECCCCeEEEEcCCCCCCCCC---EeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCc
Confidence 7654 5667777766 3 554 34444 66788999999999999987653 799999987
Q ss_pred ----CceEEEEE-ecccCCCCCceeEEEEEEccCCE-EEEEcCC--------CcEEEEeCC-CC---eeEEEeeccccCe
Q psy12614 186 ----GHAIHKMS-LDKSSKFSKNTAVWCVAFCADFT-IITGDSG--------GFVRFWDGK-TG---VQWSDVKTHKKDI 247 (708)
Q Consensus 186 ----~~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~d--------g~i~~wd~~-~~---~~~~~~~~~~~~i 247 (708)
++. ..+. .. ...+..++|+|||+ ++.++.+ ..|++||+. ++ +......++...+
T Consensus 173 ~~~~~~~-~~l~~~~-------~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~ 244 (662)
T 3azo_A 173 AADRSAV-RELSDDA-------HRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAI 244 (662)
T ss_dssp TTCGGGS-EESSCSC-------SSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCE
T ss_pred cccCCce-eEEEecC-------CCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceE
Confidence 544 3332 21 45678899999996 6655533 479999998 57 4444445567889
Q ss_pred EEEEEeCCCCEEEEEecCC--eEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccc--------eEEEEEe--CCEE
Q psy12614 248 LALTVSEDENYLYCAGVDP--TVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGD--------VKSLALH--GNRL 315 (708)
Q Consensus 248 ~~~~~s~~~~~l~~~~~dg--~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--------v~~l~~~--~~~l 315 (708)
..++|+|||+++++++.++ .|.+|+..+ ++ .......+... +..++++ +.++
T Consensus 245 ~~~~~spdg~l~~~~~~~~~~~l~~~~~~~--------~~--------~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~ 308 (662)
T 3azo_A 245 AQAEWAPDGSLIVATDRTGWWNLHRVDPAT--------GA--------ATQLCRREEEFAGPLWTPGMRWFAPLANGLIA 308 (662)
T ss_dssp EEEEECTTSCEEEEECTTSSCEEEEECTTT--------CC--------EEESSCCSSBSSCCCCSTTCCSEEECTTSCEE
T ss_pred cceEECCCCeEEEEECCCCCeEEEEEECCC--------Cc--------eeecccccccccCccccccCceEeEeCCCEEE
Confidence 9999999999888888888 566666655 42 11111122111 4567776 7788
Q ss_pred EEEcCCCeEEEE--eCCCCceeecCccCCCCceEEEEcCCcEEEE--E-cCCeEEEE--EecCCC
Q psy12614 316 YSGGLDSYLSLS--YYPPKTLVKYPCTLAQSTPVSLAKDIQHVLL--Q-YTSHLELW--SLGSAQ 373 (708)
Q Consensus 316 ~s~~~d~~i~iw--~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~--~-~~~~i~i~--~~~~~~ 373 (708)
+++.. +.+++| ++.++.+..+..+......+ ++++++.++. . .+....+| ++.+++
T Consensus 309 ~~~~~-~~~~l~~~d~~~~~~~~l~~~~~~~~~~-~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~ 371 (662)
T 3azo_A 309 VVHGK-GAAVLGILDPESGELVDAAGPWTEWAAT-LTVSGTRAVGVAASPRTAYEVVELDTVTGR 371 (662)
T ss_dssp EEEBS-SSCEEEEEETTTTEEEECCSSCCEEEEE-EEEETTEEEEEEEETTEEEEEEEEETTTCC
T ss_pred EEEEc-CccEEEEEECCCCcEEEecCCCCeEEEE-EecCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 88888 998998 66666666665333222333 1566654443 3 33334444 544433
|
| >2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ... | Back alignment and structure |
|---|
Probab=99.75 E-value=2.4e-15 Score=150.06 Aligned_cols=289 Identities=9% Similarity=0.058 Sum_probs=200.0
Q ss_pred CCCCEEEEEe------CCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEc----------CCCcEEEEE
Q psy12614 36 PKSSRLAVSR------ADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGG----------LQGFVNEYD 97 (708)
Q Consensus 36 ~~~~~la~~~------~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~----------~d~~i~vwd 97 (708)
++++++.+.. .|+.|.+||..+++.+. .+..+. .+ .++|+ +++|++++ .+++|.+||
T Consensus 13 ~~~~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~-~i~~g~--~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d 87 (361)
T 2oiz_A 13 PQENRIYVMDSVFMHLTESRVHVYDYTNGKFLG-MVPTAF--NG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWD 87 (361)
T ss_dssp CGGGEEEEEECCGGGGGGCEEEEEETTTCCEEE-EEECCE--EE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEE
T ss_pred CCCCEEEEECCCCCccccCeEEEEECCCCeEEE-EecCCC--CC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEE
Confidence 3666766654 36799999999998876 666655 55 89999 88888886 367899999
Q ss_pred CCCCeEeEEEeec------CCceEEEEEecCCCEEEEEeC--CCcEEEEEccCCcEEEEEe-cccccccEEEEEECCCC-
Q psy12614 98 MRRLNIKSSTAVT------SGTCWCLSVHKKKRLLAAGTE--QGHINLFQISDEGLLYEKL-LDRQQGRILCTAWHSSG- 167 (708)
Q Consensus 98 ~~~~~~~~~~~~~------~~~v~~~~~s~~~~~la~~~~--d~~i~iwd~~~~~~~~~~~-~~~~~~~v~~~~~s~d~- 167 (708)
..+++.+..+... ......++|+|||++|+++.. ++.|.+||+.+++.+ .. +.. .+ ...+.+.|++
T Consensus 88 ~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~--~~~i~~-~~-~~~v~~~p~~~ 163 (361)
T 2oiz_A 88 ADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYV--EDVTAA-AG-CWSVIPQPNRP 163 (361)
T ss_dssp TTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEE--EEEGGG-TT-EEEEEECTTSS
T ss_pred CcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEE--EEEecC-CC-cceeEEcCCCC
Confidence 9999988887643 345678999999999998864 588999999999876 44 332 22 2335667776
Q ss_pred CEEEEecCC-eEEEEEcCC-CceEEEEEecccCCCCCceeEEEEEEccCC-EEEEEcCCCcEEEEeCCCCee--EEEeec
Q psy12614 168 DYLVTGCAA-AVRVWDIHK-GHAIHKMSLDKSSKFSKNTAVWCVAFCADF-TIITGDSGGFVRFWDGKTGVQ--WSDVKT 242 (708)
Q Consensus 168 ~~l~~~~~d-~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~~~~~dg~i~~wd~~~~~~--~~~~~~ 242 (708)
..+++.+.| .+.+|+... ++..........-+ ....+ ..+.+++++ .++..+.++.|.++|+..+.. ...+..
T Consensus 164 ~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~-~~~~~-~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~ 241 (361)
T 2oiz_A 164 RSFMTICGDGGLLTINLGEDGKVASQSRSKQMFS-VKDDP-IFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSL 241 (361)
T ss_dssp SEEEEEETTSSEEEEEECTTSSEEEEEECCCCSC-TTTSC-BCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEES
T ss_pred eeEEEECCCCcEEEEEECCCCcEeeeccccceEc-CCCCc-eEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccc
Confidence 667777778 899998865 55542222100000 00111 123335666 466677889999999875532 222210
Q ss_pred ------c----ccCeEEEEEeCCCCEEEEEec-----------CCeEEEEEccCCcccccCCCCCCCCcceEEeEEEecc
Q psy12614 243 ------H----KKDILALTVSEDENYLYCAGV-----------DPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIH 301 (708)
Q Consensus 243 ------~----~~~i~~~~~s~~~~~l~~~~~-----------dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 301 (708)
+ ......++|+|++++++++.. .+.|.+||..+ ++ ....+..+
T Consensus 242 ~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t--------~~--------~v~~i~~~ 305 (361)
T 2oiz_A 242 LNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKT--------KQ--------RVARIPGR 305 (361)
T ss_dssp CCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTT--------TE--------EEEEEECT
T ss_pred cCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCC--------Cc--------EEEEEecC
Confidence 0 111223789999988887654 34899999998 65 56666666
Q ss_pred ccceEEEEEe--CCEEEEEcCCCeEEEEeCCCC--cee-ecCccCCCCceEEEEcCCc
Q psy12614 302 EGDVKSLALH--GNRLYSGGLDSYLSLSYYPPK--TLV-KYPCTLAQSTPVSLAKDIQ 354 (708)
Q Consensus 302 ~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~~--~~~-~~~~~~~~~~~~~~s~~~~ 354 (708)
. +.+++++ +++|++++. +.|.+||..+. ++. .+......+..++++|+|+
T Consensus 306 ~--p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l~~~~~i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 306 D--ALSMTIDQQRNLMLTLDG-GNVNVYDISQPEPKLLRTIEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp T--CCEEEEETTTTEEEEECS-SCEEEEECSSSSCEEEEEETTSCSSEEEEEECCCSC
T ss_pred C--eeEEEECCCCCEEEEeCC-CeEEEEECCCCcceeeEEeccCCCCcEEEEecCCCC
Confidence 6 9999999 888888887 99999999998 533 3333445667899999985
|
| >3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=99.75 E-value=3.3e-17 Score=167.24 Aligned_cols=231 Identities=7% Similarity=-0.056 Sum_probs=162.1
Q ss_pred EEEEEEcCCCCEEEEEeCC---CcEEEEeCCCCCeEEEEEecCCCCCcE-EEEEEe--CCEEEEEcCCCcEEEEECCCCe
Q psy12614 29 INCIACEPKSSRLAVSRAD---QSIEIWDISETPHVDRVFIGDPLSNSI-ECLTWF--NDRLFSGGLQGFVNEYDMRRLN 102 (708)
Q Consensus 29 v~~~~~s~~~~~la~~~~d---g~v~iwd~~~~~~~~~~~~~h~~~~~v-~~l~~~--~~~l~s~~~d~~i~vwd~~~~~ 102 (708)
+.+++|||||++||..... ..|.+||+.+++.. .+..+. ..+ ..+.|+ |++|+.++.++.|.+||+.+++
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~--~l~~~~--~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~ 113 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAV--QLTEGK--GDNTFGGFISTDERAFFYVKNELNLMKVDLETLE 113 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEE--ECCCSS--CBCTTTCEECTTSSEEEEEETTTEEEEEETTTCC
T ss_pred eecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEE--EeecCC--CCccccceECCCCCEEEEEEcCCcEEEEECCCCC
Confidence 7788999999998887543 36888899887653 344333 333 337888 8899999999999999999988
Q ss_pred EeEEEeecCCceEE-------------------EEEecCCCEEEEE-----eCCCcEEEEEccCCcEEEEEecccccccE
Q psy12614 103 IKSSTAVTSGTCWC-------------------LSVHKKKRLLAAG-----TEQGHINLFQISDEGLLYEKLLDRQQGRI 158 (708)
Q Consensus 103 ~~~~~~~~~~~v~~-------------------~~~s~~~~~la~~-----~~d~~i~iwd~~~~~~~~~~~~~~~~~~v 158 (708)
.......+.+.... ++|+|+++.++.+ ..+..|++||+.+++.. .+..+...+
T Consensus 114 ~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~---~~~~~~~~~ 190 (396)
T 3c5m_A 114 EQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELE---VIHQDTAWL 190 (396)
T ss_dssp EEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEE---EEEEESSCE
T ss_pred cEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEE---eeccCCccc
Confidence 76666655543333 3567788776654 35678999999988874 233456778
Q ss_pred EEEEECC-CCCEEEEecCC-------eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCC-----C
Q psy12614 159 LCTAWHS-SGDYLVTGCAA-------AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSG-----G 224 (708)
Q Consensus 159 ~~~~~s~-d~~~l~~~~~d-------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~d-----g 224 (708)
..+.|+| +++.|+..+.+ .|.+||+..++.. .+... .....+..++|+|||+ ++.++.+ +
T Consensus 191 ~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~-~l~~~-----~~~~~~~~~~~spdg~~l~~~~~~~~~~~~ 264 (396)
T 3c5m_A 191 GHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVR-KIKEH-----AEGESCTHEFWIPDGSAMAYVSYFKGQTDR 264 (396)
T ss_dssp EEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCE-ESSCC-----CTTEEEEEEEECTTSSCEEEEEEETTTCCE
T ss_pred ccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCcee-Eeecc-----CCCccccceEECCCCCEEEEEecCCCCccc
Confidence 9999999 88877766543 4788887655432 22211 1134688899999996 6655433 3
Q ss_pred cEEEEeCCCCeeEEEeeccccCeEEEEEeC-CCCEEEEEe----------------cCCeEEEEEccC
Q psy12614 225 FVRFWDGKTGVQWSDVKTHKKDILALTVSE-DENYLYCAG----------------VDPTVVCFQRTR 275 (708)
Q Consensus 225 ~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~-~~~~l~~~~----------------~dg~i~iw~~~~ 275 (708)
.|++||+.+++....... . ... +.|+| ||+++++++ .++.|++||+.+
T Consensus 265 ~l~~~d~~~g~~~~l~~~-~-~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~ 329 (396)
T 3c5m_A 265 VIYKANPETLENEEVMVM-P-PCS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKA 329 (396)
T ss_dssp EEEEECTTTCCEEEEEEC-C-SEE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTT
T ss_pred eEEEEECCCCCeEEeeeC-C-CCC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEeccc
Confidence 499999988865443221 1 233 88999 999888754 247899999987
|
| >4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=7.3e-12 Score=139.38 Aligned_cols=526 Identities=9% Similarity=0.071 Sum_probs=322.3
Q ss_pred CCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCC---cEEEEEEe-CCEEEEEcCCCcEEEEECCCC
Q psy12614 26 PKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSN---SIECLTWF-NDRLFSGGLQGFVNEYDMRRL 101 (708)
Q Consensus 26 ~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~---~v~~l~~~-~~~l~s~~~d~~i~vwd~~~~ 101 (708)
...|.++...++|.+.+ |+.+ .+..||..+++... +.... .. .|.++... ...|..++. +.|..||.+++
T Consensus 87 ~n~I~~i~~d~~g~lWi-gT~~-Gl~~yd~~~~~f~~--~~~~~-~~~~~~i~~i~~d~~g~lwi~t~-~gl~~~~~~~~ 160 (795)
T 4a2l_A 87 NDISRIVKTDSQGRVWI-GTRD-GLSRYDEEKDIFQN--FFYEK-NGKHLQVNGIEEISPEQLLISTP-EGLIMFDIKES 160 (795)
T ss_dssp CSCEEEEEECTTSCEEE-EESS-CEEEEETTTTEEEE--ECCEE-TTEECCCCEEEEEETTEEEEEET-TEEEEEETTTT
T ss_pred ccceeEEEECCCCCEEE-EeCC-chheeCCCCCeEEe--ccccc-cCCCceEEEEEECCCCCEEEEEC-CceEEEECCCC
Confidence 35799999999987554 4555 48999998776543 22211 01 18888877 666666665 55899998876
Q ss_pred eEeEEEeec-CCc-eEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCCeEE
Q psy12614 102 NIKSSTAVT-SGT-CWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAAAVR 179 (708)
Q Consensus 102 ~~~~~~~~~-~~~-v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~i~ 179 (708)
+........ ... |.++...+++.+.+ ++.++.|..|+..+++.... ........|.++...+++.+.+....+.+.
T Consensus 161 ~~~~~~~~~~~~~~i~~i~~d~~g~lwi-gt~~~Gl~~~~~~~~~~~~~-~~~~~~~~i~~i~~d~~g~lwigt~~~Gl~ 238 (795)
T 4a2l_A 161 KFIDDSFSTAMHKTIASTLYRQGDQIYI-GTSTDGLYTYSITQKTFEKV-IPILGTKQIQAILQQSPTRIWVATEGAGLF 238 (795)
T ss_dssp EEECSSSCHHHHTCCEEEEEEETTEEEE-EESSSCEEEEETTTCCEEEC-C----CCCEEEEEEEETTEEEEEEBSSCEE
T ss_pred EEEeccCCCCCCcceEEEEECCCCCEEE-EECCCCEEEEeCCCCeEEEe-cCCCCCCeeEEEEEcCCCCEEEEECCCCeE
Confidence 543211111 112 88898888886555 56655589999888776421 111234678888888887655543333899
Q ss_pred EEEcCCCceEEEEEecc-cCCCCCceeEEEEEEccCCEEEEEcCCCcEEEEeCCCCeeEEEeec-------cccCeEEEE
Q psy12614 180 VWDIHKGHAIHKMSLDK-SSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVKT-------HKKDILALT 251 (708)
Q Consensus 180 iwd~~~~~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~-------~~~~i~~~~ 251 (708)
.||..+++... +.... ....-....|.++...++|.+..|+.+ -|.+||..+++....... ....|.++.
T Consensus 239 ~~~~~~~~~~~-~~~~~~~~~~l~~~~i~~i~~d~~g~lWigt~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~ 316 (795)
T 4a2l_A 239 LINPKTKEIKN-YLHSPSNPKSISSNYIRSLAMDSQNRLWIGTFN-DLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIF 316 (795)
T ss_dssp EEETTTTEEEE-ECCCTTCTTSCSCSBEEEEEECTTSCEEEEESS-CEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEE
T ss_pred EEeCCCCeEEE-eecCCCCccccCCCeEEEEEEcCCCCEEEEeCC-hhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEE
Confidence 99987765433 32210 000011466999999999987777766 589999877765433211 235799999
Q ss_pred EeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEE----eccccceEEEEEe-CCEEEEEcCCCeEEE
Q psy12614 252 VSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNR----VIHEGDVKSLALH-GNRLYSGGLDSYLSL 326 (708)
Q Consensus 252 ~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~----~~~~~~v~~l~~~-~~~l~s~~~d~~i~i 326 (708)
..++|+ |..|+.++-|..|+... +. +...... ......|.++... ...|..|+.++-|..
T Consensus 317 ~D~~g~-lWigt~~~Gl~~~~~~~--------~~------~~~~~~~~~~~~l~~~~V~~i~~d~~g~lWiGt~~~Gl~~ 381 (795)
T 4a2l_A 317 MDSQGG-MWLGTYFGGLNYYHPIR--------NR------FKNIRNIPYKNSLSDNVVSCIVEDKDKNLWIGTNDGGLNL 381 (795)
T ss_dssp ECTTSC-EEEEESSSCEEEECGGG--------GS------SEEECCCTTSSSCSCSSEEEEEECTTSCEEEEESSSCEEE
T ss_pred EeCCcC-EEEEECCCCeEEeCCCc--------cc------ceEEcCCCCCCCCCCCeeEEEEECCCCCEEEEECCCCeEE
Confidence 999886 55677777889998765 21 1000000 0123568888888 566777888888999
Q ss_pred EeCCCCceeecCcc---------CCCCceEEEEcCCc-EEEEEcCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEE
Q psy12614 327 SYYPPKTLVKYPCT---------LAQSTPVSLAKDIQ-HVLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIV 396 (708)
Q Consensus 327 w~~~~~~~~~~~~~---------~~~~~~~~~s~~~~-~l~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (708)
|+..+.....+... ...+.++...++++ +.+...++.+..++..++. +.
T Consensus 382 ~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~---------------------~~ 440 (795)
T 4a2l_A 382 YNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQ---------------------VE 440 (795)
T ss_dssp ECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCC---------------------EE
T ss_pred EcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCc---------------------EE
Confidence 99887765554311 12334666778898 6666777889999987644 11
Q ss_pred EEEe----cCCCceEEEEeCCCCcEEEEEcCCceEEEEEEecCCcceeEEeecC--CcccccceeEEEEEecCCCeEEEE
Q psy12614 397 KMSA----VNNATIRCSVVSNDGKYVAYSTESCVRLHSLDLDGDKPQISRIKNL--PAPLFKSIFTHVLISADSTLLLAV 470 (708)
Q Consensus 397 ~~~~----~~~~~i~~~~~s~~g~~l~~~~d~~i~i~~~~~~~~~~~~~~~~~~--~~~~~~~~i~~~~~s~d~~~l~~~ 470 (708)
.... .....|.++...++|.+.+... +.+.+|+..+ . .+..+... +.......|.++...++|.+.+..
T Consensus 441 ~~~~~~~~l~~~~v~~i~~d~~g~lwigt~-~Gl~~~~~~~--~--~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt 515 (795)
T 4a2l_A 441 NFNQRNSQLVNENVYAILPDGEGNLWLGTL-SALVRFNPEQ--R--SFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGG 515 (795)
T ss_dssp EECTTTSCCSCSCEEEEEECSSSCEEEEES-SCEEEEETTT--T--EEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEE
T ss_pred EeecCCCCcCCCeeEEEEECCCCCEEEEec-CceeEEeCCC--C--eEEEccccccccccCCceEEEEEECCCCCEEEEe
Confidence 1111 1245788999988888766655 5577777543 2 23332111 001112467778889998877644
Q ss_pred ecCCc-EEEecCCCeEEEEEecC--CCCCccCcceEEEEECCCCcEEEEEecCCeEEEEECCceee-ec---CCC-CCCc
Q psy12614 471 SLNGP-LYIIDLSSLEIKYCVDP--YKSNLMSDVISLVQMSECKQYIVCADRKSHVVIWKNGQHHA-SL---PRY-RKPS 542 (708)
Q Consensus 471 ~~dg~-i~~~~~~~~~~~~~~~~--~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~-~~---~~~-~~~v 542 (708)
.+|. .|+.... +. .+.. .........|.++...++|++.+... . -+..||..+... .+ .+. ...|
T Consensus 516 -~~Gl~~~~~~~~--~~--~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~-~-Gl~~~d~~~~~~~~~~~~~gl~~~~i 588 (795)
T 4a2l_A 516 -EEGLSVFKQEGL--DI--QKASILPVSNVTKLFTNCIYEASNGIIWVGTR-E-GFYCFNEKDKQIKRYNTTNGLPNNVV 588 (795)
T ss_dssp -SSCEEEEEEETT--EE--EECCCSCSCGGGGSCEEEEEECTTSCEEEEES-S-CEEEEETTTTEEEEECGGGTCSCSCE
T ss_pred -CCceEEEeCCCC--eE--EEecCCCCCCCCCCeeEEEEECCCCCEEEEeC-C-CceeECCCCCcEEEeCCCCCCchhhe
Confidence 4554 5665555 32 2221 11111145799999999998666543 3 678888873322 22 122 3468
Q ss_pred eEEEEcCCCCEEEEEecCCcEEEEEcCCCCCCchhhhhhccCchhhhcC-CCC--eeEEEeCCCCCceEEEEcCeeEEEE
Q psy12614 543 TAMAIHPTLSTLVTVYSDHRIVEFDLNRKAFTTFSRKLETNHPNEWLSR-QLP--VLGIEFDPQDSSLIYLMDDSALCVI 619 (708)
Q Consensus 543 ~~l~~s~d~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~-~~~--i~~l~~s~~~~~l~~~~~d~~i~~w 619 (708)
.++...++|++.+++ . +-|..|+..+++..... ...+- ... ..++...++|. |..++.+| +..+
T Consensus 589 ~~i~~d~~g~lWi~t-~-~Gl~~~~~~~~~~~~~~---------~~dGl~~~~f~~~~~~~~~~G~-l~~g~~~G-l~~~ 655 (795)
T 4a2l_A 589 YGILEDSFGRLWLST-N-RGISCFNPETEKFRNFT---------ESDGLQSNQFNTASYCRTSVGQ-MYFGGING-ITTF 655 (795)
T ss_dssp EEEEECTTSCEEEEE-T-TEEEEEETTTTEEEEEC---------GGGTCSCSCEEEEEEEECTTSC-EEEEETTE-EEEE
T ss_pred EEEEECCCCCEEEEc-C-CceEEEcCCCCcEEEcC---------CcCCCccccCccCceeECCCCe-EEEecCCc-eEEE
Confidence 889998888876644 3 45888998876544111 11111 112 24677788886 56677777 5556
Q ss_pred ecC
Q psy12614 620 NKN 622 (708)
Q Consensus 620 d~~ 622 (708)
+..
T Consensus 656 ~p~ 658 (795)
T 4a2l_A 656 RPE 658 (795)
T ss_dssp CGG
T ss_pred cHH
Confidence 654
|
| >1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=8e-14 Score=145.90 Aligned_cols=318 Identities=11% Similarity=0.061 Sum_probs=217.4
Q ss_pred CEEEEEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEcc--CCcEEEEEecccccccEE
Q psy12614 82 DRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQIS--DEGLLYEKLLDRQQGRIL 159 (708)
Q Consensus 82 ~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~--~~~~~~~~~~~~~~~~v~ 159 (708)
..+++...+++|.++|..+++.+..+... ..+..++|+|||+++++++.++.|.+||+. +++.+ ..+... ....
T Consensus 168 ~~~V~~~~~~~V~viD~~t~~v~~~i~~g-~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v--~~i~~G-~~P~ 243 (567)
T 1qks_A 168 LFSVTLRDAGQIALIDGSTYEIKTVLDTG-YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTV--AEIKIG-SEAR 243 (567)
T ss_dssp EEEEEETTTTEEEEEETTTCCEEEEEECS-SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEE--EEEECC-SEEE
T ss_pred eEEEEeCCCCeEEEEECCCCeEEEEEeCC-CCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEe--EEEecC-CCCc
Confidence 45567778999999999999998888743 457799999999999999999999999995 66665 344332 3467
Q ss_pred EEEEC----CCCCEEEEecCC--eEEEEEcCCCceEEEEEecccCC----CCCceeEEEEEEccCC-E-EEEEcCCCcEE
Q psy12614 160 CTAWH----SSGDYLVTGCAA--AVRVWDIHKGHAIHKMSLDKSSK----FSKNTAVWCVAFCADF-T-IITGDSGGFVR 227 (708)
Q Consensus 160 ~~~~s----~d~~~l~~~~~d--~i~iwd~~~~~~~~~~~~~~~~~----~~~~~~v~~~~~~~~~-~-l~~~~~dg~i~ 227 (708)
.++|+ |||+++++++.. ++.++|..+.+.+..+......- |.....+..+..++++ . ++.....|.|.
T Consensus 244 ~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~ 323 (567)
T 1qks_A 244 SIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKIL 323 (567)
T ss_dssp EEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEE
T ss_pred eeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEE
Confidence 99999 699999888765 99999999999998887542100 0002257788889887 3 56667789999
Q ss_pred EEeCCCCeeE--EEeeccccCeEEEEEeCCCCEEEEEe-cCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEe-----
Q psy12614 228 FWDGKTGVQW--SDVKTHKKDILALTVSEDENYLYCAG-VDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRV----- 299 (708)
Q Consensus 228 ~wd~~~~~~~--~~~~~~~~~i~~~~~s~~~~~l~~~~-~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~----- 299 (708)
++|..+.+.+ ..+. .......+.|+|++++++++. .++.|.++|..+ ++ ......
T Consensus 324 ~vd~~~~~~~~v~~i~-~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t--------~k--------l~~~i~vgg~~ 386 (567)
T 1qks_A 324 LVDYTDLNNLKTTEIS-AERFLHDGGLDGSHRYFITAANARNKLVVIDTKE--------GK--------LVAIEDTGGQT 386 (567)
T ss_dssp EEETTCSSEEEEEEEE-CCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTT--------TE--------EEEEEECSSSS
T ss_pred EEecCCCccceeeeee-ccccccCceECCCCCEEEEEeCCCCeEEEEECCC--------Cc--------EEEEEeccCcC
Confidence 9998775432 2232 344567889999999987766 478999999998 53 222222
Q ss_pred ccccceEEEEEe--CC-EEEEEc-CCCeEEEEeCCCC-------c-eeecCccCCCCceEEEEcCCcEEEEEc-------
Q psy12614 300 IHEGDVKSLALH--GN-RLYSGG-LDSYLSLSYYPPK-------T-LVKYPCTLAQSTPVSLAKDIQHVLLQY------- 360 (708)
Q Consensus 300 ~~~~~v~~l~~~--~~-~l~s~~-~d~~i~iw~~~~~-------~-~~~~~~~~~~~~~~~~s~~~~~l~~~~------- 360 (708)
.|.+.-..+ ++ +. ..+++. .++.|.+++..+. + +..+.........+..+|+++.+.+..
T Consensus 387 Phpg~g~~~-~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~ 465 (567)
T 1qks_A 387 PHPGRGANF-VHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAE 465 (567)
T ss_dssp BCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHH
T ss_pred CCCccceee-ECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecCCCCCEEEEeCCCCCeEEEecCCCCCcc
Confidence 233222222 23 23 444543 4689999999872 2 344442222334578899999998864
Q ss_pred -CCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEE-----ecCCCceEEEEeCCCCcEEEEE------cCCceEE
Q psy12614 361 -TSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMS-----AVNNATIRCSVVSNDGKYVAYS------TESCVRL 428 (708)
Q Consensus 361 -~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~i~~~~~s~~g~~l~~~------~d~~i~i 428 (708)
.++|.++|+.+.+ ..|.. ...+.+.+. ......+..+.|+|+|+++.++ .++.|.|
T Consensus 466 ~~~~v~v~d~~~~~---~~g~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~s~~~~~~~~~~i~v 533 (567)
T 1qks_A 466 ISGSVAVFDIKAMT---GDGSD---------PEFKTLPIAEWAGITEGQPRVVQGEFNKDGTEVWFSVWNGKDQESALVV 533 (567)
T ss_dssp HHTCEEEEEGGGCC---CSSSC---------CCEEEECHHHHHTCCSSCCEEEEEEECTTSSEEEEEEECCTTSCCEEEE
T ss_pred cCceEEEEECCccc---ccccC---------CCcEEeccccccccCCCCcceEeeeECCCCCEEEEEeecCCCCCCcEEE
Confidence 3589999998751 00000 000111110 1124578899999999988874 2688999
Q ss_pred EEEEe
Q psy12614 429 HSLDL 433 (708)
Q Consensus 429 ~~~~~ 433 (708)
+|..+
T Consensus 534 ~D~~t 538 (567)
T 1qks_A 534 VDDKT 538 (567)
T ss_dssp EETTT
T ss_pred EECCC
Confidence 88765
|
| >3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans} | Back alignment and structure |
|---|
Probab=99.73 E-value=1.8e-15 Score=147.26 Aligned_cols=237 Identities=11% Similarity=-0.019 Sum_probs=175.5
Q ss_pred eeeccCCCCcEEEEEEcCCCC-EEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEE
Q psy12614 19 IKFYAPEPKVINCIACEPKSS-RLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNE 95 (708)
Q Consensus 19 ~~~~~~h~~~v~~~~~s~~~~-~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~v 95 (708)
.+.+..+.....+++|+|+|+ +++++..++.|..||..++ .. .+..+. ..+.+++++ |+.+++...++.|.+
T Consensus 20 ~~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~-~~~~~~--~~~~~l~~~~dg~l~v~~~~~~~i~~ 94 (296)
T 3e5z_A 20 ARRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LS-PEMHPS--HHQNGHCLNKQGHLIACSHGLRRLER 94 (296)
T ss_dssp CEEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EE-EEESSC--SSEEEEEECTTCCEEEEETTTTEEEE
T ss_pred EEEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eE-EEECCC--CCcceeeECCCCcEEEEecCCCeEEE
Confidence 344556677788999999998 7788888899999999987 33 666666 789999998 777666667799999
Q ss_pred EECCCCeEeEEEeec----CCceEEEEEecCCCEEEEE----e-------------CCCcEEEEEccCCcEEEEEecccc
Q psy12614 96 YDMRRLNIKSSTAVT----SGTCWCLSVHKKKRLLAAG----T-------------EQGHINLFQISDEGLLYEKLLDRQ 154 (708)
Q Consensus 96 wd~~~~~~~~~~~~~----~~~v~~~~~s~~~~~la~~----~-------------~d~~i~iwd~~~~~~~~~~~~~~~ 154 (708)
||..+++........ ...+..++++|+|+++++. + ..+.|..++.. ++.. .+..+
T Consensus 95 ~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~---~~~~~ 170 (296)
T 3e5z_A 95 QREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLS---APIRD 170 (296)
T ss_dssp ECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEE---EEECC
T ss_pred EcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEE---EeecC
Confidence 999888765443322 2346789999999988873 2 12455555554 4442 33445
Q ss_pred cccEEEEEECCCCCEEEEecCC-eEEEEEcC-CCce---EEEEEecccCCCCCceeEEEEEEccCCEEEEEcCCCcEEEE
Q psy12614 155 QGRILCTAWHSSGDYLVTGCAA-AVRVWDIH-KGHA---IHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFW 229 (708)
Q Consensus 155 ~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~-~~~~---~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~w 229 (708)
......++|+||++.+++.+.+ .|.+|++. +++. ...+ . .....+..+++.++|++.++. ++.|.+|
T Consensus 171 ~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~-~------~~~~~p~~i~~d~~G~l~v~~-~~~v~~~ 242 (296)
T 3e5z_A 171 RVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHF-T------VEPGKTDGLRVDAGGLIWASA-GDGVHVL 242 (296)
T ss_dssp CSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEE-C------CSSSCCCSEEEBTTSCEEEEE-TTEEEEE
T ss_pred CCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEe-e------CCCCCCCeEEECCCCCEEEEc-CCeEEEE
Confidence 5677899999999999777777 99999997 5554 2222 1 114556789999999866666 8899999
Q ss_pred eCCCCeeEEEeeccccCeEEEEE-eCCCCEEEEEecCCeEEEEEccC
Q psy12614 230 DGKTGVQWSDVKTHKKDILALTV-SEDENYLYCAGVDPTVVCFQRTR 275 (708)
Q Consensus 230 d~~~~~~~~~~~~~~~~i~~~~~-s~~~~~l~~~~~dg~i~iw~~~~ 275 (708)
|.. ++.+..+..+.. +.+++| .|+++.|++++.+ .+..++..+
T Consensus 243 ~~~-g~~~~~~~~~~~-~~~~~f~~~d~~~L~v~t~~-~l~~~~~~~ 286 (296)
T 3e5z_A 243 TPD-GDELGRVLTPQT-TSNLCFGGPEGRTLYMTVST-EFWSIETNV 286 (296)
T ss_dssp CTT-SCEEEEEECSSC-CCEEEEESTTSCEEEEEETT-EEEEEECSC
T ss_pred CCC-CCEEEEEECCCC-ceeEEEECCCCCEEEEEcCC-eEEEEEccc
Confidence 986 888888877766 899999 5899999988875 455555555
|
| >4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=1.4e-11 Score=137.08 Aligned_cols=516 Identities=10% Similarity=0.104 Sum_probs=317.8
Q ss_pred CCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCC------CCCcEEEEEEe-CCEEEEEcCCCcEEEEEC
Q psy12614 26 PKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDP------LSNSIECLTWF-NDRLFSGGLQGFVNEYDM 98 (708)
Q Consensus 26 ~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~------~~~~v~~l~~~-~~~l~s~~~d~~i~vwd~ 98 (708)
...|.+++-.++|. |-.|+.+| +..||-.+ .. .+.... ....|.+|... ...|..++.+| +..||.
T Consensus 42 ~n~v~~I~qD~~G~-lWigT~~G-L~ryDG~~---f~-~~~~~~~~~~~l~~n~I~~i~~d~~g~lWigT~~G-l~~yd~ 114 (795)
T 4a2l_A 42 QSTVFSIDQDKRGN-MWFATYDG-VNKYDGYA---FT-VYQHNEDDPNSIANDISRIVKTDSQGRVWIGTRDG-LSRYDE 114 (795)
T ss_dssp SSCEEEEEECTTSC-EEEEETTE-EEEECSSC---EE-EECCCTTCTTSCSCSCEEEEEECTTSCEEEEESSC-EEEEET
T ss_pred cceeEEEEEcCCCC-EEEeecCc-CcccCCCc---eE-EEeCCCCCCCcccccceeEEEECCCCCEEEEeCCc-hheeCC
Confidence 36799999999985 44666665 67777442 21 332110 12579999888 56677777655 899998
Q ss_pred CCCeEeEEEeecCC---ceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccc-ccc-EEEEEECCCCCEEEEe
Q psy12614 99 RRLNIKSSTAVTSG---TCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQ-QGR-ILCTAWHSSGDYLVTG 173 (708)
Q Consensus 99 ~~~~~~~~~~~~~~---~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~-~~~-v~~~~~s~d~~~l~~~ 173 (708)
.+.+.......... .|.++...++|.+.+. +. +.|..||..+++.. ...... ... |.++...+++...+ +
T Consensus 115 ~~~~f~~~~~~~~~~~~~i~~i~~d~~g~lwi~-t~-~gl~~~~~~~~~~~--~~~~~~~~~~~i~~i~~d~~g~lwi-g 189 (795)
T 4a2l_A 115 EKDIFQNFFYEKNGKHLQVNGIEEISPEQLLIS-TP-EGLIMFDIKESKFI--DDSFSTAMHKTIASTLYRQGDQIYI-G 189 (795)
T ss_dssp TTTEEEEECCEETTEECCCCEEEEEETTEEEEE-ET-TEEEEEETTTTEEE--CSSSCHHHHTCCEEEEEEETTEEEE-E
T ss_pred CCCeEEeccccccCCCceEEEEEECCCCCEEEE-EC-CceEEEECCCCEEE--eccCCCCCCcceEEEEECCCCCEEE-E
Confidence 87664332211111 1889999888876554 44 45899998877653 111111 123 88888888886555 5
Q ss_pred cCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEEEEcCCCcEEEEeCCCCeeEEEeec-------ccc
Q psy12614 174 CAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVKT-------HKK 245 (708)
Q Consensus 174 ~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~-------~~~ 245 (708)
+.+ .|..|+..+++........ ....|.++...+++.+..++.++.|..||..+++....... ...
T Consensus 190 t~~~Gl~~~~~~~~~~~~~~~~~------~~~~i~~i~~d~~g~lwigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~ 263 (795)
T 4a2l_A 190 TSTDGLYTYSITQKTFEKVIPIL------GTKQIQAILQQSPTRIWVATEGAGLFLINPKTKEIKNYLHSPSNPKSISSN 263 (795)
T ss_dssp ESSSCEEEEETTTCCEEECC----------CCCEEEEEEEETTEEEEEEBSSCEEEEETTTTEEEEECCCTTCTTSCSCS
T ss_pred ECCCCEEEEeCCCCeEEEecCCC------CCCeeEEEEEcCCCCEEEEECCCCeEEEeCCCCeEEEeecCCCCccccCCC
Confidence 555 8999998777654321111 14568889888899877777665699999887655433221 135
Q ss_pred CeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEe--------ccccceEEEEEe-CCEEE
Q psy12614 246 DILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRV--------IHEGDVKSLALH-GNRLY 316 (708)
Q Consensus 246 ~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~--------~~~~~v~~l~~~-~~~l~ 316 (708)
.|.++...++|...+ |+.+ -|.+|+..+ +. ...+. .....|.++... ...|.
T Consensus 264 ~i~~i~~d~~g~lWi-gt~~-Gl~~~~~~~--------~~---------~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lW 324 (795)
T 4a2l_A 264 YIRSLAMDSQNRLWI-GTFN-DLNIYHEGT--------DS---------FASYSSNPVENGSLSQRSVRSIFMDSQGGMW 324 (795)
T ss_dssp BEEEEEECTTSCEEE-EESS-CEEEEETTT--------TE---------EEEECCCTTSTTSCSSSCEEEEEECTTSCEE
T ss_pred eEEEEEEcCCCCEEE-EeCC-hhheEcCCC--------Ce---------EEEEecCCCCCCCCCCCcEEEEEEeCCcCEE
Confidence 689999998886554 5545 588898776 32 11111 123568888888 66677
Q ss_pred EEcCCCeEEEEeCCCCceeecCc-------cCCCCceEEEEcCCcEEEEEcCCeEEEEEecCCCCCCCCCCCCCCcccCC
Q psy12614 317 SGGLDSYLSLSYYPPKTLVKYPC-------TLAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPLL 389 (708)
Q Consensus 317 s~~~d~~i~iw~~~~~~~~~~~~-------~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~ 389 (708)
.|+.++-|..++..+.....+.. ....+.++...++|.+.+...++.|..|+..++.
T Consensus 325 igt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~lWiGt~~~Gl~~~~~~~~~---------------- 388 (795)
T 4a2l_A 325 LGTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKDKNLWIGTNDGGLNLYNPITQR---------------- 388 (795)
T ss_dssp EEESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECTTSCEEEEESSSCEEEECTTTCC----------------
T ss_pred EEECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECCCCCEEEEECCCCeEEEcCCCCc----------------
Confidence 78888888898876655433321 0112345666778888887777789998877643
Q ss_pred CCceEEEEEEe--------cCCCceEEEEeCCCCc-EEEEEcCCceEEEEEEecCCcceeEEeecCCcccccceeEEEEE
Q psy12614 390 SFPRLIVKMSA--------VNNATIRCSVVSNDGK-YVAYSTESCVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVLI 460 (708)
Q Consensus 390 ~~~~~~~~~~~--------~~~~~i~~~~~s~~g~-~l~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 460 (708)
...... -....|.+++..++|. +.+...++.+..|+..+ +. +..+...........|.++..
T Consensus 389 -----~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~--~~--~~~~~~~~~~l~~~~v~~i~~ 459 (795)
T 4a2l_A 389 -----FTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNS--GQ--VENFNQRNSQLVNENVYAILP 459 (795)
T ss_dssp -----EEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTT--CC--EEEECTTTSCCSCSCEEEEEE
T ss_pred -----EEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCC--Cc--EEEeecCCCCcCCCeeEEEEE
Confidence 111110 1246788999989998 44444467788887654 22 232211111111336777888
Q ss_pred ecCCCeEEEEecCCc-EEEecCCCeEEEEEecCC--CCCccCcceEEEEECCCCcEEEEEecCCeEEEEECCceeeecC-
Q psy12614 461 SADSTLLLAVSLNGP-LYIIDLSSLEIKYCVDPY--KSNLMSDVISLVQMSECKQYIVCADRKSHVVIWKNGQHHASLP- 536 (708)
Q Consensus 461 s~d~~~l~~~~~dg~-i~~~~~~~~~~~~~~~~~--~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~- 536 (708)
.++|.+.+. +.+|. +|+..++ +. ..+... ........|.++...++|++.+... +-+..|+..+....+.
T Consensus 460 d~~g~lwig-t~~Gl~~~~~~~~--~~-~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~--~Gl~~~~~~~~~~~~~~ 533 (795)
T 4a2l_A 460 DGEGNLWLG-TLSALVRFNPEQR--SF-TTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE--EGLSVFKQEGLDIQKAS 533 (795)
T ss_dssp CSSSCEEEE-ESSCEEEEETTTT--EE-EECCBCTTCCBCCCCCEEEEEECTTCCEEEEES--SCEEEEEEETTEEEECC
T ss_pred CCCCCEEEE-ecCceeEEeCCCC--eE-EEccccccccccCCceEEEEEECCCCCEEEEeC--CceEEEeCCCCeEEEec
Confidence 888886664 44554 5554444 22 222211 0000135789999999998776554 5688888763322222
Q ss_pred ------CCCCCceEEEEcCCCCEEEEEecCCcEEEEEcCCCCCCchhhhhhccCchhhhc-CCCCeeEEEeCCCCCceEE
Q psy12614 537 ------RYRKPSTAMAIHPTLSTLVTVYSDHRIVEFDLNRKAFTTFSRKLETNHPNEWLS-RQLPVLGIEFDPQDSSLIY 609 (708)
Q Consensus 537 ------~~~~~v~~l~~s~d~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~l~~s~~~~~l~~ 609 (708)
.....|.++...++|++.+ ++.. -|..||..+++..... ...+ ....|.++...++|...+.
T Consensus 534 ~~~~~~l~~~~i~~i~~d~~g~lWi-gT~~-Gl~~~d~~~~~~~~~~---------~~~gl~~~~i~~i~~d~~g~lWi~ 602 (795)
T 4a2l_A 534 ILPVSNVTKLFTNCIYEASNGIIWV-GTRE-GFYCFNEKDKQIKRYN---------TTNGLPNNVVYGILEDSFGRLWLS 602 (795)
T ss_dssp CSCSCGGGGSCEEEEEECTTSCEEE-EESS-CEEEEETTTTEEEEEC---------GGGTCSCSCEEEEEECTTSCEEEE
T ss_pred CCCCCCCCCCeeEEEEECCCCCEEE-EeCC-CceeECCCCCcEEEeC---------CCCCCchhheEEEEECCCCCEEEE
Confidence 1235688999988888665 4444 5889998877544211 1111 2346889999998875544
Q ss_pred EEcCeeEEEEecC
Q psy12614 610 LMDDSALCVINKN 622 (708)
Q Consensus 610 ~~~d~~i~~wd~~ 622 (708)
+ .. .|..||..
T Consensus 603 t-~~-Gl~~~~~~ 613 (795)
T 4a2l_A 603 T-NR-GISCFNPE 613 (795)
T ss_dssp E-TT-EEEEEETT
T ss_pred c-CC-ceEEEcCC
Confidence 4 44 46777765
|
| >2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A | Back alignment and structure |
|---|
Probab=99.71 E-value=8e-15 Score=145.46 Aligned_cols=263 Identities=13% Similarity=0.042 Sum_probs=187.2
Q ss_pred CcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECCCCeEe
Q psy12614 27 KVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMRRLNIK 104 (708)
Q Consensus 27 ~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~~~~ 104 (708)
..|.+++|+|++..++....++.++.| .+.... .+.++. ..+.+++|+ ++.++++..++.|.+||.++++..
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-~~~~~~--~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~ 79 (333)
T 2dg1_A 6 QDLPTLFYSGKSNSAVPIISESELQTI---TAEPWL-EISKKG--LQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIK 79 (333)
T ss_dssp CCCCBCCSCGGGGCSSCCCCGGGSCEE---ECEEEE-EEESSC--CCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEE
T ss_pred cccceeeecCCccceeEEeecccCccc---ccceeE-EEeccC--ccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEE
Confidence 457788999998888777778899999 333343 666676 778999999 676677888999999999988776
Q ss_pred EEEeecCCceEEEEEecCCCEEEEEeCC----CcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecC-----
Q psy12614 105 SSTAVTSGTCWCLSVHKKKRLLAAGTEQ----GHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCA----- 175 (708)
Q Consensus 105 ~~~~~~~~~v~~~~~s~~~~~la~~~~d----~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~----- 175 (708)
.....+...+.+++++|+|+++++...+ +.|.+||..++..........+...+..++++|+|+.+++...
T Consensus 80 ~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~ 159 (333)
T 2dg1_A 80 RPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTN 159 (333)
T ss_dssp EEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTB
T ss_pred EEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccC
Confidence 6554566789999999999988776666 6899999988876421111234467899999999998887653
Q ss_pred -C-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-E-EEEcCCCcEEEEeCCC-CeeEEE--------eec
Q psy12614 176 -A-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-I-ITGDSGGFVRFWDGKT-GVQWSD--------VKT 242 (708)
Q Consensus 176 -d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l-~~~~~dg~i~~wd~~~-~~~~~~--------~~~ 242 (708)
. .|..+|..+++... +... ...+..++|+|+|+ + ++...++.|.+||..+ +..+.. +.+
T Consensus 160 ~~~~l~~~~~~~~~~~~-~~~~-------~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~ 231 (333)
T 2dg1_A 160 PLGGVYYVSPDFRTVTP-IIQN-------ISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTG 231 (333)
T ss_dssp CCEEEEEECTTSCCEEE-EEEE-------ESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCS
T ss_pred CCceEEEEeCCCCEEEE-eecC-------CCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCC
Confidence 3 56667765555433 2211 33478899999985 4 4555678999999863 332221 111
Q ss_pred cccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEecccc------ceEEEEEe--CCE
Q psy12614 243 HKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEG------DVKSLALH--GNR 314 (708)
Q Consensus 243 ~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~------~v~~l~~~--~~~ 314 (708)
+ ..+..++++++|+++++...++.|.+|+... + ....+..+.. .+.+++|+ ++.
T Consensus 232 ~-~~~~~i~~d~~G~l~v~~~~~~~v~~~d~~g---------~--------~~~~~~~~~~~~g~~~~~~~~~~~~dg~~ 293 (333)
T 2dg1_A 232 H-EGPDSCCIDSDDNLYVAMYGQGRVLVFNKRG---------Y--------PIGQILIPGRDEGHMLRSTHPQFIPGTNQ 293 (333)
T ss_dssp S-SEEEEEEEBTTCCEEEEEETTTEEEEECTTS---------C--------EEEEEECTTGGGTCSCBCCEEEECTTSCE
T ss_pred C-CCCCceEECCCCCEEEEEcCCCEEEEECCCC---------C--------EEEEEEcCCCccccccCcceEEECCCCCE
Confidence 2 3678899999999888777788999999843 2 2333333322 58888987 556
Q ss_pred EEEEcCC
Q psy12614 315 LYSGGLD 321 (708)
Q Consensus 315 l~s~~~d 321 (708)
|+.++.+
T Consensus 294 L~v~~~~ 300 (333)
T 2dg1_A 294 LIICSND 300 (333)
T ss_dssp EEEEEEC
T ss_pred EEEEeCc
Confidence 6655554
|
| >2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=2.8e-13 Score=131.99 Aligned_cols=278 Identities=8% Similarity=-0.002 Sum_probs=191.6
Q ss_pred cCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECCC
Q psy12614 23 APEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMRR 100 (708)
Q Consensus 23 ~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~ 100 (708)
..+...+.+++++++|++.++...++.|.+||.. +......+..+. ..+.++++. +..+++...++.|..||..
T Consensus 11 ~~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~--~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~- 86 (299)
T 2z2n_A 11 TNQDTGPYGITVSDKGKVWITQHKANMISCINLD-GKITEYPLPTPD--AKVMCLTISSDGEVWFTENAANKIGRITKK- 86 (299)
T ss_dssp CSSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTT--CCEEEEEECTTSCEEEEETTTTEEEEECTT-
T ss_pred CCcCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCccc--CceeeEEECCCCCEEEeCCCCCeEEEECCC-
Confidence 4456789999999999977776667899999998 665432333344 789999998 6666666668899999987
Q ss_pred CeE-eEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eE
Q psy12614 101 LNI-KSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AV 178 (708)
Q Consensus 101 ~~~-~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i 178 (708)
++. ...+......+.+++++++|+++++...++.|..||. +++... .........+..+++.++|+..++...+ .|
T Consensus 87 g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~-~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i 164 (299)
T 2z2n_A 87 GIIKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIRE-YELPNKGSYPSFITLGSDNALWFTENQNNAI 164 (299)
T ss_dssp SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEE-EECSSTTCCEEEEEECTTSCEEEEETTTTEE
T ss_pred CcEEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEE-ecCCCCCCCCceEEEcCCCCEEEEeCCCCEE
Confidence 332 2222234567899999999988877767889999998 555542 2333345678999999999888877766 99
Q ss_pred EEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEE-EEcCCCcEEEEeCCCCeeEEE-eeccccCeEEEEEeCCC
Q psy12614 179 RVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTII-TGDSGGFVRFWDGKTGVQWSD-VKTHKKDILALTVSEDE 256 (708)
Q Consensus 179 ~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~-~~~~dg~i~~wd~~~~~~~~~-~~~~~~~i~~~~~s~~~ 256 (708)
..||. +++... +... .....+..+++.++|++. +...++.|.+||. +++.... ...+...+.+++++++|
T Consensus 165 ~~~~~-~g~~~~-~~~~-----~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g 236 (299)
T 2z2n_A 165 GRITE-SGDITE-FKIP-----TPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEITEFKIPTPNARPHAITAGAGI 236 (299)
T ss_dssp EEECT-TCCEEE-EECS-----STTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTT
T ss_pred EEEcC-CCcEEE-eeCC-----CCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEEEEECCCCCCCceeEEECCCC
Confidence 99998 666543 2222 124568899999999754 4445789999998 6664332 33345678999999999
Q ss_pred CEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe-CCEEEEEcCCCeEEEEeCCC
Q psy12614 257 NYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH-GNRLYSGGLDSYLSLSYYPP 331 (708)
Q Consensus 257 ~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~-~~~l~s~~~d~~i~iw~~~~ 331 (708)
+..++...++.|..|+... . ........+...+.++++. +.+.++.. .+.+..++..+
T Consensus 237 ~l~v~~~~~~~i~~~d~~g---------~-------~~~~~~~~~~~~~~~i~~~~g~l~v~~~-~~~l~~~~~~~ 295 (299)
T 2z2n_A 237 DLWFTEWGANKIGRLTSNN---------I-------IEEYPIQIKSAEPHGICFDGETIWFAME-CDKIGKLTLIK 295 (299)
T ss_dssp CEEEEETTTTEEEEEETTT---------E-------EEEEECSSSSCCEEEEEECSSCEEEEET-TTEEEEEEEC-
T ss_pred CEEEeccCCceEEEECCCC---------c-------eEEEeCCCCCCccceEEecCCCEEEEec-CCcEEEEEcCc
Confidence 8666655678999999843 1 0111122334567777666 44444444 55666665544
|
| >2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A | Back alignment and structure |
|---|
Probab=99.71 E-value=3.3e-14 Score=141.02 Aligned_cols=243 Identities=8% Similarity=-0.026 Sum_probs=169.2
Q ss_pred eeeeeccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCC----
Q psy12614 17 HNIKFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQ---- 90 (708)
Q Consensus 17 ~~~~~~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d---- 90 (708)
.....+..+...+.+++|+|+|++++++..++.|.+||..+++... ....+. ..+.+++++ ++.+++...+
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~-~~~~~~--~~~~~i~~~~dg~l~v~~~~~~~~~ 111 (333)
T 2dg1_A 35 EPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKR-PFVSHK--ANPAAIKIHKDGRLFVCYLGDFKST 111 (333)
T ss_dssp EEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEE-EEECSS--SSEEEEEECTTSCEEEEECTTSSSC
T ss_pred ceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEE-EeeCCC--CCcceEEECCCCcEEEEeCCCCCCC
Confidence 3444566677788999999999988888889999999999887654 444555 789999999 6666666655
Q ss_pred CcEEEEECCCCeEeEEEe--ecCCceEEEEEecCCCEEEEEeC------CCcEEEEEccCCcEEEEEecccccccEEEEE
Q psy12614 91 GFVNEYDMRRLNIKSSTA--VTSGTCWCLSVHKKKRLLAAGTE------QGHINLFQISDEGLLYEKLLDRQQGRILCTA 162 (708)
Q Consensus 91 ~~i~vwd~~~~~~~~~~~--~~~~~v~~~~~s~~~~~la~~~~------d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~ 162 (708)
+.|.+||.++++....+. .+...+.+++++|+|+++++... .+.|..+|..+++.. .+......+..++
T Consensus 112 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~---~~~~~~~~~~~i~ 188 (333)
T 2dg1_A 112 GGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVT---PIIQNISVANGIA 188 (333)
T ss_dssp CEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEE---EEEEEESSEEEEE
T ss_pred ceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEE---EeecCCCcccceE
Confidence 689999998877553433 34467999999999987776543 245666666655553 2222334578999
Q ss_pred ECCCCCEEEEe-cCC-eEEEEEcCC-CceEEEEEecccCCCCCceeEEEEEEccCCEEE-EEcCCCcEEEEeCCCCeeEE
Q psy12614 163 WHSSGDYLVTG-CAA-AVRVWDIHK-GHAIHKMSLDKSSKFSKNTAVWCVAFCADFTII-TGDSGGFVRFWDGKTGVQWS 238 (708)
Q Consensus 163 ~s~d~~~l~~~-~~d-~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~-~~~~dg~i~~wd~~~~~~~~ 238 (708)
|+||++.|+.+ +.+ .|.+||+.+ +..+..+.......+.....+..+++.++|++. +...++.|.+||. +++.+.
T Consensus 189 ~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~v~~~d~-~g~~~~ 267 (333)
T 2dg1_A 189 LSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNK-RGYPIG 267 (333)
T ss_dssp ECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEECT-TSCEEE
T ss_pred ECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCCEEEEEcCCCEEEEECC-CCCEEE
Confidence 99999866554 445 999999964 443322210000000002467889999999754 4456789999998 577666
Q ss_pred Eeecccc------CeEEEEEeCCCCEEEEEecCC
Q psy12614 239 DVKTHKK------DILALTVSEDENYLYCAGVDP 266 (708)
Q Consensus 239 ~~~~~~~------~i~~~~~s~~~~~l~~~~~dg 266 (708)
.+..+.. .+.+++|+||++.|+.++.++
T Consensus 268 ~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~g 301 (333)
T 2dg1_A 268 QILIPGRDEGHMLRSTHPQFIPGTNQLIICSNDI 301 (333)
T ss_dssp EEECTTGGGTCSCBCCEEEECTTSCEEEEEEECG
T ss_pred EEEcCCCccccccCcceEEECCCCCEEEEEeCcc
Confidence 6654433 688999999988887766653
|
| >2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus} | Back alignment and structure |
|---|
Probab=99.71 E-value=1.2e-14 Score=145.04 Aligned_cols=259 Identities=11% Similarity=0.083 Sum_probs=178.3
Q ss_pred CcEEEEEEcCCCCEEEEEe---------CCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCC---C-
Q psy12614 27 KVINCIACEPKSSRLAVSR---------ADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQ---G- 91 (708)
Q Consensus 27 ~~v~~~~~s~~~~~la~~~---------~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d---~- 91 (708)
..+...++ ||++||... .++.|.+||+.+++.. .+ ..+..++|+ |++|+.++.+ +
T Consensus 15 ~~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~--~l------~~~~~~~~SpDg~~la~~~~~~~~~~ 84 (347)
T 2gop_A 15 AYLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARR--FI------ENATMPRISPDGKKIAFMRANEEKKV 84 (347)
T ss_dssp CEEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEE--EE------ESCEEEEECTTSSEEEEEEEETTTTE
T ss_pred EEcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceE--Ec------ccCCCeEECCCCCEEEEEEeccCCCc
Confidence 34677788 999988752 2567999999988753 33 247789999 8888877653 2
Q ss_pred -cEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCC---------------------------CcEEEEEccCC
Q psy12614 92 -FVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQ---------------------------GHINLFQISDE 143 (708)
Q Consensus 92 -~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d---------------------------~~i~iwd~~~~ 143 (708)
.|.+||+.+++.......+ . +..++|+|||+.|+.++.+ ..|++||+.++
T Consensus 85 ~~l~~~~~~~g~~~~l~~~~-~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~ 162 (347)
T 2gop_A 85 SEIWVADLETLSSKKILEAK-N-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESE 162 (347)
T ss_dssp EEEEEEETTTTEEEEEEEES-E-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTT
T ss_pred ceEEEEECCCCceEEEEcCC-C-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCC
Confidence 4888899988876655544 3 9999999999999887642 57999999988
Q ss_pred cEEEEEecccccccEEEEEECCCCCEEEEecC---------C-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEcc
Q psy12614 144 GLLYEKLLDRQQGRILCTAWHSSGDYLVTGCA---------A-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCA 213 (708)
Q Consensus 144 ~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~---------d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 213 (708)
+.. ..+.. . .+..++|+||| .++++.. . .|.++| +++. ..+.. ...+..+ +|
T Consensus 163 ~~~--~~l~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d--~~~~-~~l~~--------~~~~~~~--sp 224 (347)
T 2gop_A 163 EVI--EEFEK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWE--DGKE-EKMFE--------KVSFYAV--DS 224 (347)
T ss_dssp EEE--EEEEE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEE--TTEE-EEEEE--------EESEEEE--EE
T ss_pred eEE--eeecC-C-CcccccCCCCe-EEEEEecccccccccccccEEEeC--CCce-EEecc--------CcceeeE--CC
Confidence 763 12222 3 67899999999 7776643 3 455555 4443 33321 1223333 89
Q ss_pred CCE-EEEEcCC--------CcEEEEeCCCCeeEEEeeccccCeEE-EEEeCCCCEEEEEecCCeEEEEEccCCcccccCC
Q psy12614 214 DFT-IITGDSG--------GFVRFWDGKTGVQWSDVKTHKKDILA-LTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTS 283 (708)
Q Consensus 214 ~~~-l~~~~~d--------g~i~~wd~~~~~~~~~~~~~~~~i~~-~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~ 283 (708)
||+ ++.++.+ ..|.+|| +++.......+...+.. +.|+ |+ .+++++.++.+++| +.+
T Consensus 225 dg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~-------- 291 (347)
T 2gop_A 225 DGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWD-------- 291 (347)
T ss_dssp CSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEET-TE-EEEEEEETTEEEEE-EES--------
T ss_pred CCCEEEEEEccccCCccccceEEEEC--CCceEeccccCCcccCCccEEc-Cc-EEEEEecCCcEEEE-EcC--------
Confidence 996 6655533 4688888 66655555566777886 8999 88 88899999999999 876
Q ss_pred CCCCCCcceEEeEEEeccccceEEEEEeCCEEEEEcCCCeE-EEEeCCCCceeecC
Q psy12614 284 GPEQGSSVWVRSVNRVIHEGDVKSLALHGNRLYSGGLDSYL-SLSYYPPKTLVKYP 338 (708)
Q Consensus 284 g~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~s~~~d~~i-~iw~~~~~~~~~~~ 338 (708)
++ . ..+..+...|.++++++..+++++.++.. .+|.++ +...++.
T Consensus 292 g~--------~-~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~l~~~~-g~~~~lt 337 (347)
T 2gop_A 292 GE--------I-KPIAKGRHWIMGFDVDEIVVYLKETATRLRELFTWD-GEEKQLT 337 (347)
T ss_dssp SS--------E-EEEECSSSEEEEEEESSSEEEEEECSSSCCEEEEES-SSEEECC
T ss_pred Cc--------e-EEEecCCCeEEeeeeeCcEEEEEcCCCChHHheEeC-CcEEEec
Confidence 54 2 33344567788888877555666666654 667665 4444433
|
| >1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=1.9e-13 Score=143.12 Aligned_cols=318 Identities=11% Similarity=0.042 Sum_probs=218.4
Q ss_pred cCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECC--CCeEeEEEeec
Q psy12614 35 EPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMR--RLNIKSSTAVT 110 (708)
Q Consensus 35 s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~--~~~~~~~~~~~ 110 (708)
+|.+.++++...++.|.++|..+++.+. .+... ..+..++|+ |+++++++.|+.|.+||+. +++.+..+..
T Consensus 164 d~~~~~~V~~~~~~~V~viD~~t~~v~~-~i~~g---~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~- 238 (567)
T 1qks_A 164 DLENLFSVTLRDAGQIALIDGSTYEIKT-VLDTG---YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKI- 238 (567)
T ss_dssp CGGGEEEEEETTTTEEEEEETTTCCEEE-EEECS---SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEEC-
T ss_pred CCCceEEEEeCCCCeEEEEECCCCeEEE-EEeCC---CCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEec-
Confidence 3445566677788999999999998876 45432 457799999 8999999999999999996 7788877765
Q ss_pred CCceEEEEEe----cCCCEEEEEeC-CCcEEEEEccCCcEEEEEeccc--------cc-ccEEEEEECCCCCEEEEecC-
Q psy12614 111 SGTCWCLSVH----KKKRLLAAGTE-QGHINLFQISDEGLLYEKLLDR--------QQ-GRILCTAWHSSGDYLVTGCA- 175 (708)
Q Consensus 111 ~~~v~~~~~s----~~~~~la~~~~-d~~i~iwd~~~~~~~~~~~~~~--------~~-~~v~~~~~s~d~~~l~~~~~- 175 (708)
......++|+ |||++++++.. +++|.++|..+.+.+......+ |. ..+..+..++++..++....
T Consensus 239 G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~ 318 (567)
T 1qks_A 239 GSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKE 318 (567)
T ss_dssp CSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETT
T ss_pred CCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecC
Confidence 3456899999 69999887765 6999999999988774333222 22 26888999998776655544
Q ss_pred C-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE--EEEEcCCCcEEEEeCCCCeeEEEeec-----cccCe
Q psy12614 176 A-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT--IITGDSGGFVRFWDGKTGVQWSDVKT-----HKKDI 247 (708)
Q Consensus 176 d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--l~~~~~dg~i~~wd~~~~~~~~~~~~-----~~~~i 247 (708)
. .|.++|..+.+.+....... ......+.|+|+|+ +++...++.|.++|+.+++.+..+.. |.+.-
T Consensus 319 ~g~v~~vd~~~~~~~~v~~i~~------~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g 392 (567)
T 1qks_A 319 TGKILLVDYTDLNNLKTTEISA------ERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRG 392 (567)
T ss_dssp TTEEEEEETTCSSEEEEEEEEC------CSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTC
T ss_pred CCeEEEEecCCCccceeeeeec------cccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccc
Confidence 4 99999988765443333221 34567889999996 44555688999999999988776653 32212
Q ss_pred EEEEEeCCCCEEEEEe--cCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEEEcC---
Q psy12614 248 LALTVSEDENYLYCAG--VDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSGGL--- 320 (708)
Q Consensus 248 ~~~~~s~~~~~l~~~~--~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~~~--- 320 (708)
..+ +.|++..+++.+ .++.|.+++..+ ++. ....|.....+......-..+..+ +.++.+...
T Consensus 393 ~~~-~~p~~g~v~~t~~~g~~~Vsvid~~~--------~~~-~~~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~~~~~~ 462 (567)
T 1qks_A 393 ANF-VHPTFGPVWATSHMGDDSVALIGTDP--------EGH-PDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNP 462 (567)
T ss_dssp EEE-EETTTEEEEEEEBSSSSEEEEEECCT--------TTC-TTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCS
T ss_pred eee-ECCCCCcEEEeCCCCCCeEEEecCCC--------CCC-ccccCEEEEEEecCCCCCEEEEeCCCCCeEEEecCCCC
Confidence 222 578755555433 468999999876 320 111244455555443332334455 677777653
Q ss_pred ----CCeEEEEeCCCC-----c--eeecC--------ccCCCCceEEEEcCCcEEEEE------cCCeEEEEEecCCC
Q psy12614 321 ----DSYLSLSYYPPK-----T--LVKYP--------CTLAQSTPVSLAKDIQHVLLQ------YTSHLELWSLGSAQ 373 (708)
Q Consensus 321 ----d~~i~iw~~~~~-----~--~~~~~--------~~~~~~~~~~~s~~~~~l~~~------~~~~i~i~~~~~~~ 373 (708)
...|.++|+.+. . ...+. ........+.++++|+.+.++ .++.|.++|..+.+
T Consensus 463 ~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~s~~~~~~~~~~i~v~D~~t~~ 540 (567)
T 1qks_A 463 EAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVVQGEFNKDGTEVWFSVWNGKDQESALVVVDDKTLE 540 (567)
T ss_dssp SHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEEEEEECTTSSEEEEEEECCTTSCCEEEEEETTTTE
T ss_pred CcccCceEEEEECCcccccccCCCcEEeccccccccCCCCcceEeeeECCCCCEEEEEeecCCCCCCcEEEEECCCce
Confidence 359999998866 1 11221 012234678899999988764 26889999988754
|
| >3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=1.4e-14 Score=142.86 Aligned_cols=239 Identities=9% Similarity=0.024 Sum_probs=177.5
Q ss_pred CcEEEEEEe--CCEEEEEcCC------------------------CcEEEEECCCCeEeEEEe-ecCCceEEEEEecCCC
Q psy12614 72 NSIECLTWF--NDRLFSGGLQ------------------------GFVNEYDMRRLNIKSSTA-VTSGTCWCLSVHKKKR 124 (708)
Q Consensus 72 ~~v~~l~~~--~~~l~s~~~d------------------------~~i~vwd~~~~~~~~~~~-~~~~~v~~~~~s~~~~ 124 (708)
+.+.+|+++ |+.+++...+ ++|.+||..+++.+..+. .+-.....++++|+|+
T Consensus 24 ~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~ 103 (329)
T 3fvz_A 24 GQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGN 103 (329)
T ss_dssp SCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTSC
T ss_pred CCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCCC
Confidence 678999999 7777776666 479999999998876665 3445789999999999
Q ss_pred EEEEEeCCCcEEEEEccCCc-EEEEEec---------ccccccEEEEEECC-CCCEEEEec-CC-eEEEEEcCCCceEEE
Q psy12614 125 LLAAGTEQGHINLFQISDEG-LLYEKLL---------DRQQGRILCTAWHS-SGDYLVTGC-AA-AVRVWDIHKGHAIHK 191 (708)
Q Consensus 125 ~la~~~~d~~i~iwd~~~~~-~~~~~~~---------~~~~~~v~~~~~s~-d~~~l~~~~-~d-~i~iwd~~~~~~~~~ 191 (708)
++++...++.|++||..... .+ ..+ ..+-.....++++| ++..+++.+ .+ .|++|+ .+++.+..
T Consensus 104 l~v~d~~~~~v~~~~~~g~~~~~--~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~~ 180 (329)
T 3fvz_A 104 YWVTDVALHQVFKLDPHSKEGPL--LILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFVTQ 180 (329)
T ss_dssp EEEEETTTTEEEEECTTCSSCCS--EEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTSCEEEE
T ss_pred EEEEECCCCEEEEEeCCCCeEEE--EEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEEEE
Confidence 88888888999999987652 22 222 23445789999999 788888876 56 999999 57777776
Q ss_pred EEecccC----CCCCceeEEEEEEccC-CE-EEEEcCCCcEEEEeCCCCeeEEEee--ccccCeEEEEEeCCCCEEEE--
Q psy12614 192 MSLDKSS----KFSKNTAVWCVAFCAD-FT-IITGDSGGFVRFWDGKTGVQWSDVK--THKKDILALTVSEDENYLYC-- 261 (708)
Q Consensus 192 ~~~~~~~----~~~~~~~v~~~~~~~~-~~-l~~~~~dg~i~~wd~~~~~~~~~~~--~~~~~i~~~~~s~~~~~l~~-- 261 (708)
+...... . ........++++|+ ++ +++...++.|++||..+|+.+..+. .+...+..++++| +..+.+
T Consensus 181 ~~~~g~~~~~~~-~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~p-g~~~~~~g 258 (329)
T 3fvz_A 181 WGEESSGSSPRP-GQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIP-GFLFAVNG 258 (329)
T ss_dssp ECEECCSSSCCT-TEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEET-TEEEEEEC
T ss_pred eccCCCCCCCCC-cccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecC-CEEEEeCC
Confidence 6432110 0 11244889999998 77 5666778899999998898888874 4566788999999 433332
Q ss_pred -----EecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEE---eccccceEEEEEe--CCEEEEEcCCCeEEEEeCCC
Q psy12614 262 -----AGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNR---VIHEGDVKSLALH--GNRLYSGGLDSYLSLSYYPP 331 (708)
Q Consensus 262 -----~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~---~~~~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~ 331 (708)
...+..|++|+..+ |+ ....+ ..+...+.+++++ |.++++...++.|++|++..
T Consensus 259 ~~~v~~~~~~~v~~~~~~~--------g~--------~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 259 KPYFGDQEPVQGFVMNFSS--------GE--------IIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp CCCTTCSCCCCEEEEETTT--------CC--------EEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEEE
T ss_pred CEEeccCCCcEEEEEEcCC--------Ce--------EEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCCc
Confidence 23345899999988 65 34444 3566778999998 66788888899999998754
|
| >3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.69 E-value=1.4e-10 Score=128.80 Aligned_cols=539 Identities=9% Similarity=0.058 Sum_probs=322.3
Q ss_pred CcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEe---cCCC-CCcEEEEEEe---CCEEEEEcCCCcEEEEECC
Q psy12614 27 KVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFI---GDPL-SNSIECLTWF---NDRLFSGGLQGFVNEYDMR 99 (708)
Q Consensus 27 ~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~---~h~~-~~~v~~l~~~---~~~l~s~~~d~~i~vwd~~ 99 (708)
..|.++...++|+.|-+|+.++.+..||..+++....... ...+ ...|.++... ...|..++.++.|..+|.+
T Consensus 66 n~I~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~f~~~~~~~~~~~~l~~~~i~~i~~d~~~~g~lwi~t~~~gl~~~~~~ 145 (781)
T 3v9f_A 66 NELNEVYTDPVQPVIWIATQRAGLNAYNYETQSFSVYQYNPEDPQSLITNDVTHITSSVQAGKGLWVCTYYRGIEYLDIA 145 (781)
T ss_dssp SCEEEEEECSSSSEEEEEESSSCEEEEETTTTEEEEECCCTTCSSSCSCSCEEEEEECSSTTSEEEEEESSSCEEEEETT
T ss_pred cccceEEEcCCCCEEEEEeCCCCcceECCCCCeEEeeccccCCCCCcccCcceEEEecCccCCCEEEEECCCCeeEEECC
Confidence 4599999999887355577775799999988776431111 1100 1368888765 3677777766678999988
Q ss_pred CCeEeEEEe-----ecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecc-----cccccEEEEEECCCCCE
Q psy12614 100 RLNIKSSTA-----VTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLD-----RQQGRILCTAWHSSGDY 169 (708)
Q Consensus 100 ~~~~~~~~~-----~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~-----~~~~~v~~~~~s~d~~~ 169 (708)
+++...... .....|.++...++|.+.+ ++.++-|..||..+++........ -....|.++...+++.+
T Consensus 146 ~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lwi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~l 224 (781)
T 3v9f_A 146 TGKFTHYNKSTVPALPSEQTWTATEAEDGKLYI-GHVEGGLSILSLNDKSVKHFVHDPQNPNSLPGNDVRCIYKDTNGNI 224 (781)
T ss_dssp TTEEEEESTTTCTTCSCCCEEEEEEEETTEEEE-EETTTEEEEEETTTTEEEEECC--------CCSSEEEEEECTTCCE
T ss_pred CCeEEeeccCcccCCCccceEEEEECCCCCEEE-EecCCCeEEEcCCCCceEeeecCCCCcccCCCCceeEEEEcCCCCE
Confidence 766543211 1234688888888876554 566656889998887654211000 11356899999888886
Q ss_pred EEEecCCeEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEEEEcCCCcEEEEeCCCCeeEEEee--------
Q psy12614 170 LVTGCAAAVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVK-------- 241 (708)
Q Consensus 170 l~~~~~d~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~-------- 241 (708)
.+... +.+.+||..+++.............-....|.++...++|.+..|+..+-|.++|..+++......
T Consensus 225 wigt~-~Gl~~~d~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~f~~~~~ 303 (781)
T 3v9f_A 225 WIGTS-KGLALFNANTETFTNFHNNPGNIHGALSSYIFSIKQLKDNKLWIATELNGIMILDLQQNQFLLPEQIRFEFIRE 303 (781)
T ss_dssp EEEET-TEEEEEETTTTEEEC-----------CCCCEEEEEECTTSEEEEEESSSCEEEEETTCC---------CEEECB
T ss_pred EEEeC-CcHheECCCCCcEEEEEcCCCccccccCceEEEEEECCCCCEEEEeCCCCeEEECCCCCeeeeeeccccccccC
Confidence 66543 389999987665432211100000011466999999999998888886779999987665322111
Q ss_pred ------ccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEE-------EeccccceEEE
Q psy12614 242 ------THKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVN-------RVIHEGDVKSL 308 (708)
Q Consensus 242 ------~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~-------~~~~~~~v~~l 308 (708)
.....|.++...++|+ |..|+.++-|..++... +. +..... .......|.++
T Consensus 304 ~~~~~~l~~~~v~~i~~D~~g~-lWigt~~~Gl~~~~~~~--------~~------~~~~~~~~~~~~~~~l~~~~v~~i 368 (781)
T 3v9f_A 304 GDNNYSLSNASARYIFQDSFNN-IWIGTWGGGINFISNAP--------PT------FHTWSYSPTQMNESSLSNKVVSSV 368 (781)
T ss_dssp CSSTTSBSSSCEEEEEECSSCC-EEEEEBSSCEEEECSSC--------CS------CEEEC----CCCSSCCSSSCEEEE
T ss_pred CCCCCCCCCCeEEEEEEeCCCC-EEEEecCCeEEEeCCCC--------Cc------ceeeccCccccccCCCCCcceEEE
Confidence 1345789999998885 55677777888888775 21 101100 01123568888
Q ss_pred EEe-CCEEEEEcCCCeEEEEeCCCCceeecCcc----CCCCceEEEEcCCcEEEEEcCCeEEEEEecCCCCCCCCCCCCC
Q psy12614 309 ALH-GNRLYSGGLDSYLSLSYYPPKTLVKYPCT----LAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNT 383 (708)
Q Consensus 309 ~~~-~~~l~s~~~d~~i~iw~~~~~~~~~~~~~----~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~~ 383 (708)
... ...|..|+.++-|..++..+.....+..+ ...+.++...++|.+.+...++.+..++..++.
T Consensus 369 ~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~---------- 438 (781)
T 3v9f_A 369 CDDGQGKLWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGNLWFGTYLGNISYYNTRLKK---------- 438 (781)
T ss_dssp EECTTSCEEEEEBSSCEEEEETTEEEEECC-----CCCSBEEEEEECTTSCEEEEETTEEEEEECSSSCE----------
T ss_pred EEcCCCCEEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECCCCCEEEEeccCCEEEEcCCCCc----------
Confidence 887 56677788777788898876654443211 122345556677888777777788888776533
Q ss_pred CcccCCCCceEEEEEE--ecCCCceEEEEeCCCCcEEEEEcCCceEEEEEEecCCcceeEEeecCCcccc-cceeEEEEE
Q psy12614 384 TGVPLLSFPRLIVKMS--AVNNATIRCSVVSNDGKYVAYSTESCVRLHSLDLDGDKPQISRIKNLPAPLF-KSIFTHVLI 460 (708)
Q Consensus 384 ~~~~~~~~~~~~~~~~--~~~~~~i~~~~~s~~g~~l~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~ 460 (708)
+.... ......|.++...++|.+.+... +.+..|+..+ ...... ........ ...|.++..
T Consensus 439 -----------~~~~~~~~~~~~~v~~i~~d~~g~lwigt~-~Gl~~~~~~~--~~~~~~--~~~~~~~~~~~~i~~i~~ 502 (781)
T 3v9f_A 439 -----------FQIIELEKNELLDVRVFYEDKNKKIWIGTH-AGVFVIDLAS--KKVIHH--YDTSNSQLLENFVRSIAQ 502 (781)
T ss_dssp -----------EEECCSTTTCCCCEEEEEECTTSEEEEEET-TEEEEEESSS--SSCCEE--ECTTTSSCSCSCEEEEEE
T ss_pred -----------EEEeccCCCCCCeEEEEEECCCCCEEEEEC-CceEEEeCCC--CeEEec--ccCcccccccceeEEEEE
Confidence 21111 11346788999888887666554 5677777654 222211 11111000 236777888
Q ss_pred ecCCCeEEEEecCCcEEEecCCCeEEEEEecCCCCCccCcceEEEEECCCCcEEEEEecCCeEEEEECCceee-ecC---
Q psy12614 461 SADSTLLLAVSLNGPLYIIDLSSLEIKYCVDPYKSNLMSDVISLVQMSECKQYIVCADRKSHVVIWKNGQHHA-SLP--- 536 (708)
Q Consensus 461 s~d~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~-~~~--- 536 (708)
.++|.+.+ ++.++.|+.++.... ....+....+. ....|.++...++|++.++. .+|.|..||..+... .+.
T Consensus 503 d~~g~lWi-gt~~~Gl~~~~~~~~-~~~~~~~~~~l-~~~~i~~i~~d~~g~lWi~T-~~Glv~~~d~~~~~~~~~~~~~ 578 (781)
T 3v9f_A 503 DSEGRFWI-GTFGGGVGIYTPDMQ-LVRKFNQYEGF-CSNTINQIYRSSKGQMWLAT-GEGLVCFPSARNFDYQVFQRKE 578 (781)
T ss_dssp CTTCCEEE-EESSSCEEEECTTCC-EEEEECTTTTC-SCSCEEEEEECTTSCEEEEE-TTEEEEESCTTTCCCEEECGGG
T ss_pred cCCCCEEE-EEcCCCEEEEeCCCC-eEEEccCCCCC-CCCeeEEEEECCCCCEEEEE-CCCceEEECCCCCcEEEccccC
Confidence 88888766 444333555654332 23334322221 14578999999999866655 366658888773322 221
Q ss_pred C-CCCCceEEEEcCCCCEEEEEecCCcEEEEEcCCCCCCchhhhhhccCchhhhcCCCCeeEEEeCCCCCceEEEEcCee
Q psy12614 537 R-YRKPSTAMAIHPTLSTLVTVYSDHRIVEFDLNRKAFTTFSRKLETNHPNEWLSRQLPVLGIEFDPQDSSLIYLMDDSA 615 (708)
Q Consensus 537 ~-~~~~v~~l~~s~d~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~~~~l~~~~~d~~ 615 (708)
+ ....|.++...++|++.+ ++.+| |..|+..+++...+... .-+........++...++|. |..++.+|
T Consensus 579 gl~~~~i~~i~~d~~g~lW~-~t~~G-l~~~~~~~~~~~~~~~~------dGl~~~~f~~~~~~~~~~G~-l~~g~~~G- 648 (781)
T 3v9f_A 579 GLPNTHIRAISEDKNGNIWA-STNTG-ISCYITSKKCFYTYDHS------NNIPQGSFISGCVTKDHNGL-IYFGSING- 648 (781)
T ss_dssp TCSCCCCCEEEECSSSCEEE-ECSSC-EEEEETTTTEEEEECGG------GTCCSSCEEEEEEEECTTSC-EEEEETTE-
T ss_pred CCCCceEEEEEECCCCCEEE-EcCCc-eEEEECCCCceEEeccc------CCccccccccCceEECCCCE-EEEECCCc-
Confidence 1 124688999998888655 44555 88888877654422110 01111111234677777887 56677787
Q ss_pred EEEEecC
Q psy12614 616 LCVINKN 622 (708)
Q Consensus 616 i~~wd~~ 622 (708)
+..++..
T Consensus 649 l~~f~p~ 655 (781)
T 3v9f_A 649 LCFFNPD 655 (781)
T ss_dssp EEEECSC
T ss_pred eEEEChh
Confidence 5556654
|
| >1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1 | Back alignment and structure |
|---|
Probab=99.68 E-value=1.8e-13 Score=132.22 Aligned_cols=231 Identities=11% Similarity=0.117 Sum_probs=165.9
Q ss_pred CcEEEEEEe--CCEEEEEcCCCcEEEEECCCCeEeEEEee------cCCceEEEEEe-cCCCEEEEEeC-CCcEEEEEcc
Q psy12614 72 NSIECLTWF--NDRLFSGGLQGFVNEYDMRRLNIKSSTAV------TSGTCWCLSVH-KKKRLLAAGTE-QGHINLFQIS 141 (708)
Q Consensus 72 ~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~~~~~~~~~------~~~~v~~~~~s-~~~~~la~~~~-d~~i~iwd~~ 141 (708)
..+.+++++ +..+++...++.|.+||.+ ++.+..+.. +...+..++++ ++++++++... ++.|.+|| .
T Consensus 30 ~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d-~ 107 (286)
T 1q7f_A 30 TEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYN-Q 107 (286)
T ss_dssp SCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEEC-T
T ss_pred CCCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEEC-C
Confidence 678999998 7777777889999999987 566655542 33578899995 67766665533 78999999 4
Q ss_pred CCcEEEEEecc-cccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EE
Q psy12614 142 DEGLLYEKLLD-RQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-II 218 (708)
Q Consensus 142 ~~~~~~~~~~~-~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~ 218 (708)
+++.. ..+. .+...+..++++|+|+.+++...+ .|.+||. +++.+..+... .....+..++++++|+ ++
T Consensus 108 ~g~~~--~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~-----~~~~~p~~i~~~~~g~l~v 179 (286)
T 1q7f_A 108 YGQFV--RKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQ-NGNVLHKFGCS-----KHLEFPNGVVVNDKQEIFI 179 (286)
T ss_dssp TSCEE--EEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECT-TSCEEEEEECT-----TTCSSEEEEEECSSSEEEE
T ss_pred CCcEE--EEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcC-CCCEEEEeCCC-----CccCCcEEEEECCCCCEEE
Confidence 55554 3332 334578999999999988877777 9999995 46666655432 1145689999999998 45
Q ss_pred EEcCCCcEEEEeCCCCeeEEEeecc--ccCeEEEEEeCCCCEEEEEecCC-eEEEEEccCCcccccCCCCCCCCcceEEe
Q psy12614 219 TGDSGGFVRFWDGKTGVQWSDVKTH--KKDILALTVSEDENYLYCAGVDP-TVVCFQRTRKPQVCSTSGPEQGSSVWVRS 295 (708)
Q Consensus 219 ~~~~dg~i~~wd~~~~~~~~~~~~~--~~~i~~~~~s~~~~~l~~~~~dg-~i~iw~~~~~~~~~~~~g~~~~~~~~~~~ 295 (708)
+...++.|++||. +++.+..+..+ ...+..++++++|+++++...++ .|.+|+... + ..
T Consensus 180 ~~~~~~~i~~~~~-~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g---------~--------~~ 241 (286)
T 1q7f_A 180 SDNRAHCVKVFNY-EGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQDG---------Q--------LI 241 (286)
T ss_dssp EEGGGTEEEEEET-TCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTTS---------C--------EE
T ss_pred EECCCCEEEEEcC-CCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCCC---------C--------EE
Confidence 5566899999997 46666666433 36789999999998888887775 999999643 2 23
Q ss_pred EEEeccc--cceEEEEEe--CCEEEEEcCCCeEEEEeCCC
Q psy12614 296 VNRVIHE--GDVKSLALH--GNRLYSGGLDSYLSLSYYPP 331 (708)
Q Consensus 296 ~~~~~~~--~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~ 331 (708)
..+..+. ..+.+++++ +.++++ +.++.|++|++..
T Consensus 242 ~~~~~~~~~~~~~~i~~~~~g~l~vs-~~~~~v~v~~~~~ 280 (286)
T 1q7f_A 242 SALESKVKHAQCFDVALMDDGSVVLA-SKDYRLYIYRYVQ 280 (286)
T ss_dssp EEEEESSCCSCEEEEEEETTTEEEEE-ETTTEEEEEECSC
T ss_pred EEEcccCCCCcceeEEECCCCcEEEE-CCCCeEEEEEccc
Confidence 3333332 236778887 544444 6688899988754
|
| >2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A* | Back alignment and structure |
|---|
Probab=99.68 E-value=6.4e-15 Score=161.87 Aligned_cols=241 Identities=7% Similarity=0.021 Sum_probs=174.3
Q ss_pred CCCCcEEEEEEcCCCCEEEEEeCCC-----cEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCc----
Q psy12614 24 PEPKVINCIACEPKSSRLAVSRADQ-----SIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGF---- 92 (708)
Q Consensus 24 ~h~~~v~~~~~s~~~~~la~~~~dg-----~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~---- 92 (708)
+|...+..++|||||++||.+..++ .|++||+.+++.+...+.. ..+..++|+ |+.|+.++.++.
T Consensus 122 ~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~----~~~~~~~wspDg~~l~~~~~~~~~~~~ 197 (710)
T 2xdw_A 122 DGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER----VKFSCMAWTHDGKGMFYNAYPQQDGKS 197 (710)
T ss_dssp TSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE----ECSCCEEECTTSSEEEEEECCCCSSCC
T ss_pred CCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccC----cccceEEEEeCCCEEEEEEECCccccc
Confidence 4555789999999999999875543 8999999999876533332 225679999 888988887765
Q ss_pred ------------EEEEECCCCeEe--EEEe--ecCCceEEEEEecCCCEEEEEeC-----CCcEEEEEccC------CcE
Q psy12614 93 ------------VNEYDMRRLNIK--SSTA--VTSGTCWCLSVHKKKRLLAAGTE-----QGHINLFQISD------EGL 145 (708)
Q Consensus 93 ------------i~vwd~~~~~~~--~~~~--~~~~~v~~~~~s~~~~~la~~~~-----d~~i~iwd~~~------~~~ 145 (708)
|.+|++.+++.. ..+. .|...+..++|||||++|+.++. +..|++||+.+ +..
T Consensus 198 ~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~ 277 (710)
T 2xdw_A 198 DGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGIL 277 (710)
T ss_dssp SSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSC
T ss_pred cccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCcc
Confidence 999999887632 2223 24556889999999999988765 57899999986 521
Q ss_pred EEEEecccccccEEEEEECCCCCEEEEecC----C-eEEEEEcCCCc--eEEEEEecccCCCCCceeEEEEEEccCCE-E
Q psy12614 146 LYEKLLDRQQGRILCTAWHSSGDYLVTGCA----A-AVRVWDIHKGH--AIHKMSLDKSSKFSKNTAVWCVAFCADFT-I 217 (708)
Q Consensus 146 ~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~----d-~i~iwd~~~~~--~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l 217 (708)
.. ..+..+...+.. .|+|+|+.|+..+. + .|.+||+.++. ....+.... ....+..++|++++. +
T Consensus 278 ~~-~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~-----~~~~~~~~~~~~~~~lv 350 (710)
T 2xdw_A 278 KW-VKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEH-----EKDVLEWVACVRSNFLV 350 (710)
T ss_dssp CC-EEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCC-----SSCEEEEEEEETTTEEE
T ss_pred ce-EEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCC-----CCCeEEEEEEEcCCEEE
Confidence 11 344445555544 48899998876654 2 59999998774 234443321 124688899987776 5
Q ss_pred EEEcCCC--cEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEe----cCCeEEEEEccC
Q psy12614 218 ITGDSGG--FVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAG----VDPTVVCFQRTR 275 (708)
Q Consensus 218 ~~~~~dg--~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~----~dg~i~iw~~~~ 275 (708)
++...++ .|.+|++.+|+.+..+..+...+..++++|+++.++... ..+.++.||+.+
T Consensus 351 ~~~~~~g~~~l~~~~~~~g~~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~t 414 (710)
T 2xdw_A 351 LCYLHDVKNTLQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTK 414 (710)
T ss_dssp EEEEETTEEEEEEEETTTCCEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTS
T ss_pred EEEEECCEEEEEEEECCCCCEEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCC
Confidence 6666676 467788877887778877778888999999998776442 246899999987
|
| >3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis} | Back alignment and structure |
|---|
Probab=99.67 E-value=4.5e-14 Score=138.99 Aligned_cols=266 Identities=8% Similarity=0.014 Sum_probs=185.9
Q ss_pred CCCcEEEEeCCCCCeEEEEEe---cCCCCCcEEEEEEe-CCEEEEEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEec
Q psy12614 46 ADQSIEIWDISETPHVDRVFI---GDPLSNSIECLTWF-NDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHK 121 (708)
Q Consensus 46 ~dg~v~iwd~~~~~~~~~~~~---~h~~~~~v~~l~~~-~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~ 121 (708)
.++.|.++|..+++.....+. +..+......+++. +..+++...++.|.+||..+++.+.++. .......+++++
T Consensus 15 ~~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~~~~lyv~~~~~~~v~viD~~t~~~~~~i~-~~~~p~~i~~~~ 93 (328)
T 3dsm_A 15 SNATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIRDGIGWIVVNNSHVIFAIDINTFKEVGRIT-GFTSPRYIHFLS 93 (328)
T ss_dssp CCBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEETTEEEEEEGGGTEEEEEETTTCCEEEEEE-CCSSEEEEEEEE
T ss_pred CCceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEECCEEEEEEcCCCEEEEEECcccEEEEEcC-CCCCCcEEEEeC
Confidence 478999999999876542211 22223557888888 5555666678999999999999988885 356789999999
Q ss_pred CCCEEEEEeCCCcEEEEEccCCcEEEEEeccc---ccccEEEEEECCCCCEEEEec--CC-eEEEEEcCCCceEEEEEec
Q psy12614 122 KKRLLAAGTEQGHINLFQISDEGLLYEKLLDR---QQGRILCTAWHSSGDYLVTGC--AA-AVRVWDIHKGHAIHKMSLD 195 (708)
Q Consensus 122 ~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~---~~~~v~~~~~s~d~~~l~~~~--~d-~i~iwd~~~~~~~~~~~~~ 195 (708)
+++.+++...++.|.+||..+++......... .......+++ ++..|+.+. .+ .|.++|+.+++.+..+...
T Consensus 94 ~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g 171 (328)
T 3dsm_A 94 DEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ--YGKYVYVNCWSYQNRILKIDTETDKVVDELTIG 171 (328)
T ss_dssp TTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE--ETTEEEEEECTTCCEEEEEETTTTEEEEEEECS
T ss_pred CCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE--ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcC
Confidence 98544443378999999999988763222222 0114456667 344555444 36 9999999999988888654
Q ss_pred ccCCCCCceeEEEEEEccCCEEEEEcC-C----------CcEEEEeCCCCeeEEEeecc-ccCeEEEEEeCCCCEEEEEe
Q psy12614 196 KSSKFSKNTAVWCVAFCADFTIITGDS-G----------GFVRFWDGKTGVQWSDVKTH-KKDILALTVSEDENYLYCAG 263 (708)
Q Consensus 196 ~~~~~~~~~~v~~~~~~~~~~l~~~~~-d----------g~i~~wd~~~~~~~~~~~~~-~~~i~~~~~s~~~~~l~~~~ 263 (708)
.....++++|+|+++.++. + +.|.++|..+++....+... ......++++|++++|+++.
T Consensus 172 --------~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~ 243 (328)
T 3dsm_A 172 --------IQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWIN 243 (328)
T ss_dssp --------SCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEES
T ss_pred --------CCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEc
Confidence 2346788999998555544 3 68999999999887776532 24688999999999999876
Q ss_pred cCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe---CCEEEEE----cCCCeEEEEeCCCCceee
Q psy12614 264 VDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH---GNRLYSG----GLDSYLSLSYYPPKTLVK 336 (708)
Q Consensus 264 ~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~---~~~l~s~----~~d~~i~iw~~~~~~~~~ 336 (708)
. .|.+||..+ ++.. .. ............++++ +..+++. ..++.|.+||.....+..
T Consensus 244 ~--~v~~~d~~t--------~~~~-~~-----~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~g~~~~~ 307 (328)
T 3dsm_A 244 N--DIWRMPVEA--------DRVP-VR-----PFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQGKLIDE 307 (328)
T ss_dssp S--SEEEEETTC--------SSCC-SS-----CSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTTCCEEEE
T ss_pred c--EEEEEECCC--------Ccee-ee-----eeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCCCCEEEE
Confidence 5 899999987 4300 00 0011113567888886 5566666 578899999998544444
Q ss_pred cC
Q psy12614 337 YP 338 (708)
Q Consensus 337 ~~ 338 (708)
+.
T Consensus 308 i~ 309 (328)
T 3dsm_A 308 FY 309 (328)
T ss_dssp EE
T ss_pred EE
Confidence 43
|
| >2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus} | Back alignment and structure |
|---|
Probab=99.66 E-value=3.3e-14 Score=141.99 Aligned_cols=253 Identities=8% Similarity=0.016 Sum_probs=165.4
Q ss_pred cEEEEEEeCCEEEEEc---------CCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCC---C--cEEEE
Q psy12614 73 SIECLTWFNDRLFSGG---------LQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQ---G--HINLF 138 (708)
Q Consensus 73 ~v~~l~~~~~~l~s~~---------~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d---~--~i~iw 138 (708)
.+..+++.|++++... .++.|.+||+.+++... + ..+..++|||||++||.++.+ + .|++|
T Consensus 16 ~~~~~~~dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~-l----~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~ 90 (347)
T 2gop_A 16 YLSDPRTKGELVAYVLTKANLKDNKYENTIVIENLKNNARRF-I----ENATMPRISPDGKKIAFMRANEEKKVSEIWVA 90 (347)
T ss_dssp EEEEEEEETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEE-E----ESCEEEEECTTSSEEEEEEEETTTTEEEEEEE
T ss_pred EcccceECCcEEEEEEeecCcccCCccceEEEEeCCCCceEE-c----ccCCCeEECCCCCEEEEEEeccCCCcceEEEE
Confidence 4455555666665432 26789999999887543 3 468889999999999987754 2 48888
Q ss_pred EccCCcEEEEEecccccccEEEEEECCCCCEEEEecC---------------------------C-eEEEEEcCCCceEE
Q psy12614 139 QISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCA---------------------------A-AVRVWDIHKGHAIH 190 (708)
Q Consensus 139 d~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~---------------------------d-~i~iwd~~~~~~~~ 190 (708)
|+.+++.. .+..+.. +..++|+|||+.|+.++. . .|.+||+.+++.+.
T Consensus 91 ~~~~g~~~---~l~~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~ 166 (347)
T 2gop_A 91 DLETLSSK---KILEAKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIE 166 (347)
T ss_dssp ETTTTEEE---EEEEESE-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEE
T ss_pred ECCCCceE---EEEcCCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEe
Confidence 88888764 2222334 999999999999988752 3 79999998887645
Q ss_pred EEEecccCCCCCceeEEEEEEccCCEEEEEcCC---------CcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEE
Q psy12614 191 KMSLDKSSKFSKNTAVWCVAFCADFTIITGDSG---------GFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYC 261 (708)
Q Consensus 191 ~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d---------g~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~ 261 (708)
.+.. . .+..++|+|||.++++..+ ..|.++| +++. ..+..+ ..+..+ +|||++|+.
T Consensus 167 ~l~~--------~-~~~~~~~spdg~~~~~~~~~~~~~~~~~~~l~~~d--~~~~-~~l~~~-~~~~~~--spdg~~l~~ 231 (347)
T 2gop_A 167 EFEK--------P-RFSSGIWHRDKIVVNVPHREIIPQYFKFWDIYIWE--DGKE-EKMFEK-VSFYAV--DSDGERILL 231 (347)
T ss_dssp EEEE--------E-TTCEEEEETTEEEEEEECCCSSCCSSCCEEEEEEE--TTEE-EEEEEE-ESEEEE--EECSSCEEE
T ss_pred eecC--------C-CcccccCCCCeEEEEEecccccccccccccEEEeC--CCce-EEeccC-cceeeE--CCCCCEEEE
Confidence 4432 2 4567899999933334332 2455555 5554 334334 555544 999998887
Q ss_pred EecC--------CeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEE-EEEeCCEEEEEcCCCeEEEEeCCCC
Q psy12614 262 AGVD--------PTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKS-LALHGNRLYSGGLDSYLSLSYYPPK 332 (708)
Q Consensus 262 ~~~d--------g~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~-l~~~~~~l~s~~~d~~i~iw~~~~~ 332 (708)
++.+ ..|.+|| + ++ .......+...+.. +.|++.++++++.++.+++| +.++
T Consensus 232 ~~~~~~~~~~~~~~l~~~d--~--------~~--------~~~l~~~~~~~~~~~~~~sdg~~~~~~~~~~~~l~-~~~g 292 (347)
T 2gop_A 232 YGKPEKKYMSEHNKLYIYD--G--------KE--------VMGILDEVDRGVGQAKIKDGKVYFTLFEEGSVNLY-IWDG 292 (347)
T ss_dssp EECCSSSCCCSSCEEEEEC--S--------SC--------EEESSTTCCSEEEEEEEETTEEEEEEEETTEEEEE-EESS
T ss_pred EEccccCCccccceEEEEC--C--------Cc--------eEeccccCCcccCCccEEcCcEEEEEecCCcEEEE-EcCC
Confidence 7754 3688888 5 43 22233345566775 77872288888999999999 8754
Q ss_pred ceeecCccCCCCceEEEEcCCcEEEE-EcCCeE-EEEEec
Q psy12614 333 TLVKYPCTLAQSTPVSLAKDIQHVLL-QYTSHL-ELWSLG 370 (708)
Q Consensus 333 ~~~~~~~~~~~~~~~~~s~~~~~l~~-~~~~~i-~i~~~~ 370 (708)
....+.........++++| .++++ ..++.. .+|.+.
T Consensus 293 ~~~~~~~~~~~v~~~~~s~--~~~~~~~~~~~~~~l~~~~ 330 (347)
T 2gop_A 293 EIKPIAKGRHWIMGFDVDE--IVVYLKETATRLRELFTWD 330 (347)
T ss_dssp SEEEEECSSSEEEEEEESS--SEEEEEECSSSCCEEEEES
T ss_pred ceEEEecCCCeEEeeeeeC--cEEEEEcCCCChHHheEeC
Confidence 4444432333345677888 45544 444433 666655
|
| >3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans} | Back alignment and structure |
|---|
Probab=99.66 E-value=1.4e-13 Score=133.78 Aligned_cols=247 Identities=10% Similarity=-0.022 Sum_probs=174.3
Q ss_pred CeEeEEEeecCCceEEEEEecCCC-EEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eE
Q psy12614 101 LNIKSSTAVTSGTCWCLSVHKKKR-LLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AV 178 (708)
Q Consensus 101 ~~~~~~~~~~~~~v~~~~~s~~~~-~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i 178 (708)
+..+..+..+.....+++|+|+++ +++++..++.|..||..++ . ..+..+...+.+++++|+|+++++...+ .|
T Consensus 17 ~~~~~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~-~---~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i 92 (296)
T 3e5z_A 17 GAEARRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ-L---SPEMHPSHHQNGHCLNKQGHLIACSHGLRRL 92 (296)
T ss_dssp TCCCEEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC-E---EEEESSCSSEEEEEECTTCCEEEEETTTTEE
T ss_pred CCcEEEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC-e---EEEECCCCCcceeeECCCCcEEEEecCCCeE
Confidence 344455556667788999999998 7777888999999999987 4 3455566789999999999988887776 99
Q ss_pred EEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEEEE-----c-------------CCCcEEEEeCCCCeeEEEe
Q psy12614 179 RVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITG-----D-------------SGGFVRFWDGKTGVQWSDV 240 (708)
Q Consensus 179 ~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~-----~-------------~dg~i~~wd~~~~~~~~~~ 240 (708)
.+||..+++.......... .....+..++++|+|++..+ . ..+.|..++.. ++. ..+
T Consensus 93 ~~~d~~~g~~~~~~~~~~~---~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~-~~~ 167 (296)
T 3e5z_A 93 ERQREPGGEWESIADSFEG---KKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTL-SAP 167 (296)
T ss_dssp EEECSTTCCEEEEECEETT---EECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCE-EEE
T ss_pred EEEcCCCCcEEEEeeccCC---CCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCE-EEe
Confidence 9999988876544322110 00234568999999985553 2 13467777765 443 344
Q ss_pred eccccCeEEEEEeCCCCEEEEEecCCeEEEEEcc-CCcccccCCCCCCCCcce-EEeEEEeccccceEEEEEe--CCEEE
Q psy12614 241 KTHKKDILALTVSEDENYLYCAGVDPTVVCFQRT-RKPQVCSTSGPEQGSSVW-VRSVNRVIHEGDVKSLALH--GNRLY 316 (708)
Q Consensus 241 ~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~-~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~v~~l~~~--~~~l~ 316 (708)
..+......++|+|+++.+++.+.++.|.+|++. + |. . .....+..+...+.+++++ |++++
T Consensus 168 ~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~--------g~------~~~~~~~~~~~~~~p~~i~~d~~G~l~v 233 (296)
T 3e5z_A 168 IRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNAR--------GE------TEYQGVHFTVEPGKTDGLRVDAGGLIWA 233 (296)
T ss_dssp ECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSS--------SC------EEEEEEEECCSSSCCCSEEEBTTSCEEE
T ss_pred ecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCC--------Cc------CcCCCeEeeCCCCCCCeEEECCCCCEEE
Confidence 4566677899999999999777778999999987 3 32 1 0112223345567788888 66555
Q ss_pred EEcCCCeEEEEeCCCCceeecCccCCCCceEEE-EcCCcEEEEEcCCeEEEEEecCCC
Q psy12614 317 SGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSL-AKDIQHVLLQYTSHLELWSLGSAQ 373 (708)
Q Consensus 317 s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~-s~~~~~l~~~~~~~i~i~~~~~~~ 373 (708)
+. ++.|.+|+.....+..+..+.. +..+++ +|+++.|.++..+.+.-++..+..
T Consensus 234 ~~--~~~v~~~~~~g~~~~~~~~~~~-~~~~~f~~~d~~~L~v~t~~~l~~~~~~~~~ 288 (296)
T 3e5z_A 234 SA--GDGVHVLTPDGDELGRVLTPQT-TSNLCFGGPEGRTLYMTVSTEFWSIETNVRG 288 (296)
T ss_dssp EE--TTEEEEECTTSCEEEEEECSSC-CCEEEEESTTSCEEEEEETTEEEEEECSCCB
T ss_pred Ec--CCeEEEECCCCCEEEEEECCCC-ceeEEEECCCCCEEEEEcCCeEEEEEccccc
Confidence 44 8899999998766666654445 778889 589888888766766666665533
|
| >2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A* | Back alignment and structure |
|---|
Probab=99.64 E-value=4.6e-12 Score=123.33 Aligned_cols=277 Identities=8% Similarity=0.039 Sum_probs=193.4
Q ss_pred EecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECCCCeEeEE-EeecCCceEEEEEecCCCEEEEEeCCCcEEEEEcc
Q psy12614 65 FIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMRRLNIKSS-TAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQIS 141 (708)
Q Consensus 65 ~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~~~~~~-~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~ 141 (708)
+..+. ..+.++++. |..+++...++.|.+||.. ++.... +..+...+.+++++++|.++++...++.|..||..
T Consensus 10 ~~~~~--~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~ 86 (299)
T 2z2n_A 10 LTNQD--TGPYGITVSDKGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK 86 (299)
T ss_dssp CCSSS--CCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT
T ss_pred CCCcC--CCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC
Confidence 33444 689999999 6666665568999999988 554322 22345779999999999987776668889999986
Q ss_pred CCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEE-E
Q psy12614 142 DEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTII-T 219 (708)
Q Consensus 142 ~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~-~ 219 (708)
++... ..+......+..+++.+++..+++...+ .|..||. +++... +... .....+..+++.++|++. +
T Consensus 87 -g~~~~-~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~-~~~~-----~~~~~~~~i~~~~~g~l~v~ 157 (299)
T 2z2n_A 87 -GIIKE-YTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIRE-YELP-----NKGSYPSFITLGSDNALWFT 157 (299)
T ss_dssp -SCEEE-EECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEE-EECS-----STTCCEEEEEECTTSCEEEE
T ss_pred -CcEEE-EeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEE-ecCC-----CCCCCCceEEEcCCCCEEEE
Confidence 44321 2233345678999999999888877767 9999998 565443 2222 124568899999999754 4
Q ss_pred EcCCCcEEEEeCCCCeeEEE-eeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEE
Q psy12614 220 GDSGGFVRFWDGKTGVQWSD-VKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNR 298 (708)
Q Consensus 220 ~~~dg~i~~wd~~~~~~~~~-~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~ 298 (708)
...++.|..||. +++.... +......+..++++++++..++...++.|..|+. + ++ . .....
T Consensus 158 ~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~--------g~------~-~~~~~ 220 (299)
T 2z2n_A 158 ENQNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-S--------GE------I-TEFKI 220 (299)
T ss_dssp ETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-T--------CC------E-EEEEC
T ss_pred eCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-C--------Cc------E-EEEEC
Confidence 455789999998 6665443 3334567889999999987776666789999998 6 43 1 11122
Q ss_pred eccccceEEEEEe--CCEEEEEcCCCeEEEEeCCCCceeecC--ccCCCCceEEEEcCCcEEEEEcCCeEEEEEecCC
Q psy12614 299 VIHEGDVKSLALH--GNRLYSGGLDSYLSLSYYPPKTLVKYP--CTLAQSTPVSLAKDIQHVLLQYTSHLELWSLGSA 372 (708)
Q Consensus 299 ~~~~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~~~~~~~~--~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~ 372 (708)
..+...+.+++++ +..+++...++.|..|+.. ..+..+. .....+..+++ +++.+.++...+.+..++..+.
T Consensus 221 ~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~i~~-~~g~l~v~~~~~~l~~~~~~~~ 296 (299)
T 2z2n_A 221 PTPNARPHAITAGAGIDLWFTEWGANKIGRLTSN-NIIEEYPIQIKSAEPHGICF-DGETIWFAMECDKIGKLTLIKD 296 (299)
T ss_dssp SSTTCCEEEEEECSTTCEEEEETTTTEEEEEETT-TEEEEEECSSSSCCEEEEEE-CSSCEEEEETTTEEEEEEEC--
T ss_pred CCCCCCceeEEECCCCCEEEeccCCceEEEECCC-CceEEEeCCCCCCccceEEe-cCCCEEEEecCCcEEEEEcCcc
Confidence 3345678899998 6666666578899999984 4444332 22345567888 9999888877788888887653
|
| >2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=99.64 E-value=4e-15 Score=162.93 Aligned_cols=238 Identities=10% Similarity=0.025 Sum_probs=165.7
Q ss_pred CCCCcEEEEEEcCCCCEEEEE-----eCCCcEEEEeCCCCCeE-EEEEecCCCCCcEEEEEEe--CCEEEEEcCCCc---
Q psy12614 24 PEPKVINCIACEPKSSRLAVS-----RADQSIEIWDISETPHV-DRVFIGDPLSNSIECLTWF--NDRLFSGGLQGF--- 92 (708)
Q Consensus 24 ~h~~~v~~~~~s~~~~~la~~-----~~dg~v~iwd~~~~~~~-~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~--- 92 (708)
+|...+..++|||||++||.+ +++..|++||+.+++.+ ...+.+. ....++|+ |+.|+.++.|..
T Consensus 118 ~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~~----~~~~~~wspDg~~l~~~~~d~~~~~ 193 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIEGG----KYATPKWTPDSKGFYYEWLPTDPSI 193 (695)
T ss_dssp SSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCBSCC----TTCCCEECTTSSEEEEEECCCCTTS
T ss_pred CCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCcccCcc----cccceEEecCCCEEEEEEecCCCCC
Confidence 566679999999999999954 34468999999998864 2112211 12688999 888998888776
Q ss_pred ----------EEEEECCCCe----EeEEEeecCCceEEEEEecCCCEEEEEeCCC----cEEEEEccCCcEEEEEecccc
Q psy12614 93 ----------VNEYDMRRLN----IKSSTAVTSGTCWCLSVHKKKRLLAAGTEQG----HINLFQISDEGLLYEKLLDRQ 154 (708)
Q Consensus 93 ----------i~vwd~~~~~----~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~----~i~iwd~~~~~~~~~~~~~~~ 154 (708)
|++|++.++. ++.....+...+.+++|||||++|+.++.++ .|++|+..+++.. .+..+
T Consensus 194 ~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~---~l~~~ 270 (695)
T 2bkl_A 194 KVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFR---LLVKG 270 (695)
T ss_dssp CGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCE---EEEEC
T ss_pred ccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceE---EeecC
Confidence 9999999876 3333334556789999999999998877665 6777776666553 34444
Q ss_pred cccEEEEEECCCCCEEEEec---CC-eEEEEEcCCCce--EEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEE
Q psy12614 155 QGRILCTAWHSSGDYLVTGC---AA-AVRVWDIHKGHA--IHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVR 227 (708)
Q Consensus 155 ~~~v~~~~~s~d~~~l~~~~---~d-~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~ 227 (708)
...+....+ ++|.+++... .+ .|.+||+.++.. ...+... .....+..++++ ++. +++...++..+
T Consensus 271 ~~~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~-----~~~~~l~~~~~~-~~~lv~~~~~dg~~~ 343 (695)
T 2bkl_A 271 VGAKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPE-----DSSASLLSVSIV-GGHLSLEYLKDATSE 343 (695)
T ss_dssp SSCCEEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECC-----CSSCEEEEEEEE-TTEEEEEEEETTEEE
T ss_pred CCceEEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecC-----CCCCeEEEEEEE-CCEEEEEEEECCEEE
Confidence 555566666 5666444443 25 899999987753 2333322 114567888888 555 67777888777
Q ss_pred EEeCC-CCeeEEEeecc-ccCeEEEEEeCCCCEEEEEe----cCCeEEEEEccC
Q psy12614 228 FWDGK-TGVQWSDVKTH-KKDILALTVSEDENYLYCAG----VDPTVVCFQRTR 275 (708)
Q Consensus 228 ~wd~~-~~~~~~~~~~~-~~~i~~~~~s~~~~~l~~~~----~dg~i~iw~~~~ 275 (708)
+|.+. +++....+..+ ...+..++++|+++.++... ..+.|++||+.+
T Consensus 344 l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~ 397 (695)
T 2bkl_A 344 VRVATLKGKPVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVST 397 (695)
T ss_dssp EEEEETTCCEEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTT
T ss_pred EEEEeCCCCeeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCC
Confidence 77544 46556666554 56778888999998777433 347899999988
|
| >3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.64 E-value=1.4e-09 Score=120.66 Aligned_cols=545 Identities=8% Similarity=0.046 Sum_probs=321.3
Q ss_pred eeeeeeeccCC-CCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEec--CC-----C-CCcEEEEEEe-CCE-
Q psy12614 15 GVHNIKFYAPE-PKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIG--DP-----L-SNSIECLTWF-NDR- 83 (708)
Q Consensus 15 ~~~~~~~~~~h-~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~--h~-----~-~~~v~~l~~~-~~~- 83 (708)
.++....-.+- ...|+++.-.++|. |=.|+.+| +..||-.+ . . .+.. .. + ...|.+|.-. ...
T Consensus 6 ~f~~~~~~~gLs~n~V~~I~qD~~G~-lWigT~~G-L~ryDG~~--f-~-~~~~~~~~~~~~~l~~n~I~~i~~d~~g~~ 79 (781)
T 3v9f_A 6 LIQRLGIEQGLSNNYVLSITQDKQGF-LWFATEEG-LNKFDGTR--F-I-TYYKEEQSSSVQSITGNELNEVYTDPVQPV 79 (781)
T ss_dssp CEEEESGGGTCSCSBEEEEEECTTSC-EEEEESSC-EEEECSSS--E-E-EECCCSSCSSSCCCSCSCEEEEEECSSSSE
T ss_pred ceEECCCCCCCccCEeEEEEECCCCC-EEEccCCc-CccccCCc--e-E-EEEcCCCCCccccccccccceEEEcCCCCE
Confidence 33443333333 46799999999985 56666675 77777553 1 1 2221 10 0 2458999887 455
Q ss_pred EEEEcCCCcEEEEECCCCeEeEEEee-------cCCceEEEEEec--CCCEEEEEeCCCcEEEEEccCCcEEEEEecc--
Q psy12614 84 LFSGGLQGFVNEYDMRRLNIKSSTAV-------TSGTCWCLSVHK--KKRLLAAGTEQGHINLFQISDEGLLYEKLLD-- 152 (708)
Q Consensus 84 l~s~~~d~~i~vwd~~~~~~~~~~~~-------~~~~v~~~~~s~--~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~-- 152 (708)
|..++.++-+..||..+++....... ....|.++.... ++. |..++.++.|..||..+++........
T Consensus 80 lWigt~~~Gl~~~d~~~~~f~~~~~~~~~~~~l~~~~i~~i~~d~~~~g~-lwi~t~~~gl~~~~~~~~~~~~~~~~~~~ 158 (781)
T 3v9f_A 80 IWIATQRAGLNAYNYETQSFSVYQYNPEDPQSLITNDVTHITSSVQAGKG-LWVCTYYRGIEYLDIATGKFTHYNKSTVP 158 (781)
T ss_dssp EEEEESSSCEEEEETTTTEEEEECCCTTCSSSCSCSCEEEEEECSSTTSE-EEEEESSSCEEEEETTTTEEEEESTTTCT
T ss_pred EEEEeCCCCcceECCCCCeEEeeccccCCCCCcccCcceEEEecCccCCC-EEEEECCCCeeEEECCCCeEEeeccCccc
Confidence 77888886799999988765432111 123688888887 665 445664556899998887764211100
Q ss_pred -cccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEEEEcCCCcEEEEe
Q psy12614 153 -RQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWD 230 (708)
Q Consensus 153 -~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~wd 230 (708)
-....|.++...+++.+.+ ++.+ .|..||..+++.............-....|.++...++|.+..++.+ -+.+||
T Consensus 159 ~l~~~~i~~i~~d~~g~lwi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lwigt~~-Gl~~~d 236 (781)
T 3v9f_A 159 ALPSEQTWTATEAEDGKLYI-GHVEGGLSILSLNDKSVKHFVHDPQNPNSLPGNDVRCIYKDTNGNIWIGTSK-GLALFN 236 (781)
T ss_dssp TCSCCCEEEEEEEETTEEEE-EETTTEEEEEETTTTEEEEECC--------CCSSEEEEEECTTCCEEEEETT-EEEEEE
T ss_pred CCCccceEEEEECCCCCEEE-EecCCCeEEEcCCCCceEeeecCCCCcccCCCCceeEEEEcCCCCEEEEeCC-cHheEC
Confidence 1134588888877776555 5555 89999987765432111000000001356889999889987777766 699999
Q ss_pred CCCCeeEEEee-------ccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEE------
Q psy12614 231 GKTGVQWSDVK-------THKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVN------ 297 (708)
Q Consensus 231 ~~~~~~~~~~~-------~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~------ 297 (708)
..+++...... .....|.++...++|. |..|+..+-|.+++..+ +. +.....
T Consensus 237 ~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~-lWigt~~~Gl~~~~~~~--------~~------~~~~~~~~f~~~ 301 (781)
T 3v9f_A 237 ANTETFTNFHNNPGNIHGALSSYIFSIKQLKDNK-LWIATELNGIMILDLQQ--------NQ------FLLPEQIRFEFI 301 (781)
T ss_dssp TTTTEEEC-----------CCCCEEEEEECTTSE-EEEEESSSCEEEEETTC--------C---------------CEEE
T ss_pred CCCCcEEEEEcCCCccccccCceEEEEEECCCCC-EEEEeCCCCeEEECCCC--------Ce------eeeeeccccccc
Confidence 87765432211 1245689999888885 55566656788888876 32 000000
Q ss_pred ------EeccccceEEEEEe-CCEEEEEcCCCeEEEEeCCCCceeecCc----------cCCCCceEEEEcCCcEEEEEc
Q psy12614 298 ------RVIHEGDVKSLALH-GNRLYSGGLDSYLSLSYYPPKTLVKYPC----------TLAQSTPVSLAKDIQHVLLQY 360 (708)
Q Consensus 298 ------~~~~~~~v~~l~~~-~~~l~s~~~d~~i~iw~~~~~~~~~~~~----------~~~~~~~~~~s~~~~~l~~~~ 360 (708)
.......|.++... ...|..|+.++-|..++........+.. ....+.++...++|.+.+...
T Consensus 302 ~~~~~~~~l~~~~v~~i~~D~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lWigt~ 381 (781)
T 3v9f_A 302 REGDNNYSLSNASARYIFQDSFNNIWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGKLWIGTD 381 (781)
T ss_dssp CBCSSTTSBSSSCEEEEEECSSCCEEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSCEEEEEB
T ss_pred cCCCCCCCCCCCeEEEEEEeCCCCEEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCCEEEEeC
Confidence 01234568888888 5667778878888889887766444321 112234566677788887777
Q ss_pred CCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEEEcCCceEEEEEEecCCccee
Q psy12614 361 TSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYSTESCVRLHSLDLDGDKPQI 440 (708)
Q Consensus 361 ~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~d~~i~i~~~~~~~~~~~~ 440 (708)
++.|..|+..+... .............|.++...++|.+.+...++.+..++..+ + .+
T Consensus 382 ~~Gl~~~~~~~~~~------------------~~~~~~~~~~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~--~--~~ 439 (781)
T 3v9f_A 382 GGGINVFENGKRVA------------------IYNKENRELLSNSVLCSLKDSEGNLWFGTYLGNISYYNTRL--K--KF 439 (781)
T ss_dssp SSCEEEEETTEEEE------------------ECC-----CCCSBEEEEEECTTSCEEEEETTEEEEEECSSS--C--EE
T ss_pred CCcEEEEECCCCeE------------------EEccCCCCCCCcceEEEEECCCCCEEEEeccCCEEEEcCCC--C--cE
Confidence 77888888765320 00000001234678999988888877755566777776543 2 23
Q ss_pred EEeecCCcccccceeEEEEEecCCCeEEEEecCCc-EEEecCCCeEEEEEecCCCCCccCcceEEEEECCCCcEEEEEec
Q psy12614 441 SRIKNLPAPLFKSIFTHVLISADSTLLLAVSLNGP-LYIIDLSSLEIKYCVDPYKSNLMSDVISLVQMSECKQYIVCADR 519 (708)
Q Consensus 441 ~~~~~~~~~~~~~~i~~~~~s~d~~~l~~~~~dg~-i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~ 519 (708)
..+. .. ......|.++...++|.+.+ ++..|. .++..++.............. ...|.++...++|++.+.. .
T Consensus 440 ~~~~-~~-~~~~~~v~~i~~d~~g~lwi-gt~~Gl~~~~~~~~~~~~~~~~~~~~~~--~~~i~~i~~d~~g~lWigt-~ 513 (781)
T 3v9f_A 440 QIIE-LE-KNELLDVRVFYEDKNKKIWI-GTHAGVFVIDLASKKVIHHYDTSNSQLL--ENFVRSIAQDSEGRFWIGT-F 513 (781)
T ss_dssp EECC-ST-TTCCCCEEEEEECTTSEEEE-EETTEEEEEESSSSSCCEEECTTTSSCS--CSCEEEEEECTTCCEEEEE-S
T ss_pred EEec-cC-CCCCCeEEEEEECCCCCEEE-EECCceEEEeCCCCeEEecccCcccccc--cceeEEEEEcCCCCEEEEE-c
Confidence 3321 11 11133677788888887655 445443 444444433222211111111 3578999999999866654 4
Q ss_pred CCeEEEEECCceee-ecCC----CCCCceEEEEcCCCCEEEEEecCCcEEEEEcCCCCCCchhhhhhccCchhhhcCCCC
Q psy12614 520 KSHVVIWKNGQHHA-SLPR----YRKPSTAMAIHPTLSTLVTVYSDHRIVEFDLNRKAFTTFSRKLETNHPNEWLSRQLP 594 (708)
Q Consensus 520 d~~i~iw~~~~~~~-~~~~----~~~~v~~l~~s~d~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (708)
++-+..|+..+... .+.. ....|.++...++|.+.+ ++.+|-+..||..+++..... ..-.-....
T Consensus 514 ~~Gl~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-~T~~Glv~~~d~~~~~~~~~~--------~~~gl~~~~ 584 (781)
T 3v9f_A 514 GGGVGIYTPDMQLVRKFNQYEGFCSNTINQIYRSSKGQMWL-ATGEGLVCFPSARNFDYQVFQ--------RKEGLPNTH 584 (781)
T ss_dssp SSCEEEECTTCCEEEEECTTTTCSCSCEEEEEECTTSCEEE-EETTEEEEESCTTTCCCEEEC--------GGGTCSCCC
T ss_pred CCCEEEEeCCCCeEEEccCCCCCCCCeeEEEEECCCCCEEE-EECCCceEEECCCCCcEEEcc--------ccCCCCCce
Confidence 34477788773322 2221 235688999988888665 444665488998877654211 110012345
Q ss_pred eeEEEeCCCCCceEEEEcCeeEEEEecC
Q psy12614 595 VLGIEFDPQDSSLIYLMDDSALCVINKN 622 (708)
Q Consensus 595 i~~l~~s~~~~~l~~~~~d~~i~~wd~~ 622 (708)
|.++...++|...+. +..| |..+|..
T Consensus 585 i~~i~~d~~g~lW~~-t~~G-l~~~~~~ 610 (781)
T 3v9f_A 585 IRAISEDKNGNIWAS-TNTG-ISCYITS 610 (781)
T ss_dssp CCEEEECSSSCEEEE-CSSC-EEEEETT
T ss_pred EEEEEECCCCCEEEE-cCCc-eEEEECC
Confidence 788999988875443 4455 7777764
|
| >1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A | Back alignment and structure |
|---|
Probab=99.64 E-value=5.2e-14 Score=134.88 Aligned_cols=235 Identities=12% Similarity=-0.039 Sum_probs=165.5
Q ss_pred cEEEEEEcCCCCEEE-EEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECCCCeEe
Q psy12614 28 VINCIACEPKSSRLA-VSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMRRLNIK 104 (708)
Q Consensus 28 ~v~~~~~s~~~~~la-~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~~~~ 104 (708)
...+++++|+|++.+ +...++.|.+||..++.... ....+. ..+.+++++ ++.+++.. ++.|.+||..+....
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~-~~~~~~--~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~ 100 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTV-LPFNGL--YQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQT 100 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EE-CCCCSC--CSCCCEEECTTCCEEEEET-TTEEEEECTTCSCCE
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccce-EeeCCc--CCcceeEECCCCCEEEEcC-CCEEEEEeCCCceEe
Confidence 788999999999776 44678899999987654322 212233 567889998 56555544 889999998775543
Q ss_pred EEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEc
Q psy12614 105 SSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDI 183 (708)
Q Consensus 105 ~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~ 183 (708)
.........+.+++++++|+++++...++.|.+|+..+.... .........+..++++++|+.+++...+ .|.+||.
T Consensus 101 ~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~--~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~ 178 (270)
T 1rwi_B 101 VLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQT--VLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEA 178 (270)
T ss_dssp ECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCE--ECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECT
T ss_pred eeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeE--eeccccCCCceeEEEeCCCCEEEEECCCCEEEEEec
Confidence 222223357899999999997777677889999976655443 2222233467889999999977777666 9999998
Q ss_pred CCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEE
Q psy12614 184 HKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCA 262 (708)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~ 262 (708)
..+....... .....+.++++.++|. +++...++.|.+|+............+...+.+++++++|+.+++.
T Consensus 179 ~~~~~~~~~~-------~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~ 251 (270)
T 1rwi_B 179 ESNNQVVLPF-------TDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVAD 251 (270)
T ss_dssp TTCCEEECCC-------SSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECCCCSCSCEEEEEECTTCCEEEEE
T ss_pred CCCceEeecc-------cCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeeccCCCCCceeEEECCCCCEEEEE
Confidence 7665433211 1135688999999997 4555567899999987654433322334678999999999988888
Q ss_pred ecCCeEEEEEccC
Q psy12614 263 GVDPTVVCFQRTR 275 (708)
Q Consensus 263 ~~dg~i~iw~~~~ 275 (708)
..++.|+++++..
T Consensus 252 ~~~~~v~~~~~~~ 264 (270)
T 1rwi_B 252 RGNDRVVKLTSLE 264 (270)
T ss_dssp GGGTEEEEECCCG
T ss_pred CCCCEEEEEcCCC
Confidence 8899999999876
|
| >3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae} | Back alignment and structure |
|---|
Probab=99.63 E-value=1.9e-13 Score=130.15 Aligned_cols=212 Identities=12% Similarity=0.049 Sum_probs=164.3
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECCCCeEeEEEeec-CCc
Q psy12614 37 KSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMRRLNIKSSTAVT-SGT 113 (708)
Q Consensus 37 ~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~-~~~ 113 (708)
.+++|++++.++.|.+||.++++.+- .+..+. ...+.+++++ |+.|+ +.++.|..||. +++.+..+..+ ...
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w-~~~~~~-~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~ 78 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVW-EYPLEK-GWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAPAGCE 78 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEE-EEECCT-TCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCTTCE
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEE-EeCCCc-cCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCCcc
Confidence 45789999999999999999999886 566543 1367888888 77777 45788999999 89999998865 357
Q ss_pred eEEEEEecCCCEEEEEeC-CCcEEEEEccCCcEEEEEecc----cccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCc
Q psy12614 114 CWCLSVHKKKRLLAAGTE-QGHINLFQISDEGLLYEKLLD----RQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGH 187 (708)
Q Consensus 114 v~~~~~s~~~~~la~~~~-d~~i~iwd~~~~~~~~~~~~~----~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~ 187 (708)
+.++.+.++|+++++.+. ++.|..+|. +++.+....+. .+......+++.++|+++++...+ .|..||.+ |+
T Consensus 79 ~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~ 156 (276)
T 3no2_A 79 MQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQ 156 (276)
T ss_dssp EEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SC
T ss_pred ccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CC
Confidence 899999999999999887 777877775 56665333332 122345566789999999999988 99999988 99
Q ss_pred eEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCeeEEEeeccc------cCeEEEEEeCCCCEEE
Q psy12614 188 AIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDVKTHK------KDILALTVSEDENYLY 260 (708)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~~~~~------~~i~~~~~s~~~~~l~ 260 (708)
.+.++... ..+.++...++|. ++++..++.|..+|..+|+.+..+..+. ..+..++..++|+.++
T Consensus 157 ~~w~~~~~--------~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v 228 (276)
T 3no2_A 157 LLNSVKLS--------GTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYI 228 (276)
T ss_dssp EEEEEECS--------SCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEE
T ss_pred EEEEEECC--------CCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEE
Confidence 99888753 2345677788886 5566667789999999999988886432 2378888999998888
Q ss_pred EEe
Q psy12614 261 CAG 263 (708)
Q Consensus 261 ~~~ 263 (708)
+..
T Consensus 229 ~~~ 231 (276)
T 3no2_A 229 CNW 231 (276)
T ss_dssp EEE
T ss_pred Eec
Confidence 764
|
| >2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A* | Back alignment and structure |
|---|
Probab=99.62 E-value=2.8e-13 Score=148.86 Aligned_cols=270 Identities=7% Similarity=-0.005 Sum_probs=180.5
Q ss_pred CCCCEEEEEeCCC-----cEEEEeCCCCCeEEEEEe------cCCCCCcEEEEEEe--CCEEEEEcCCC-----cEEEEE
Q psy12614 36 PKSSRLAVSRADQ-----SIEIWDISETPHVDRVFI------GDPLSNSIECLTWF--NDRLFSGGLQG-----FVNEYD 97 (708)
Q Consensus 36 ~~~~~la~~~~dg-----~v~iwd~~~~~~~~~~~~------~h~~~~~v~~l~~~--~~~l~s~~~d~-----~i~vwd 97 (708)
|+|++++....++ .+.+.+...+.... .+. +|. ..+..++|| |++|+.+..++ +|++||
T Consensus 81 ~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-lld~~~l~~~~~--~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d 157 (710)
T 2xdw_A 81 KKGKRYFYFYNTGLQNQRVLYVQDSLEGEARV-FLDPNILSDDGT--VALRGYAFSEDGEYFAYGLSASGSDWVTIKFMK 157 (710)
T ss_dssp EETTEEEEEEECSSCSSCEEEEESSTTSCCEE-EECGGGGCTTSC--EEEEEEEECTTSSEEEEEEEETTCSCEEEEEEE
T ss_pred EECCEEEEEEEcCCceEEEEEEEcCCCCCcEE-EECHHHhccCCC--EEEEEEEECCCCCEEEEEEcCCCCceEEEEEEE
Confidence 8999988764332 34444544444321 332 233 468899999 88888665433 899999
Q ss_pred CCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCc----------------EEEEEccCCcE--EEEEecccccccEE
Q psy12614 98 MRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGH----------------INLFQISDEGL--LYEKLLDRQQGRIL 159 (708)
Q Consensus 98 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~----------------i~iwd~~~~~~--~~~~~~~~~~~~v~ 159 (708)
+.+++.+.....+ ..+..++|+|||+.|+.++.++. |++|++.++.. ........+...+.
T Consensus 158 ~~tg~~~~~~~~~-~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~ 236 (710)
T 2xdw_A 158 VDGAKELPDVLER-VKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMG 236 (710)
T ss_dssp TTTTEEEEEEEEE-ECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEE
T ss_pred CCCCCCCcccccC-cccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEE
Confidence 9999877643332 23678999999999999888765 99999988762 11123333556688
Q ss_pred EEEECCCCCEEEEecC-----C-eEEEEEcCC------Cc-eEEEEEecccCCCCCceeEEEEEEccCC-EEEEEcC---
Q psy12614 160 CTAWHSSGDYLVTGCA-----A-AVRVWDIHK------GH-AIHKMSLDKSSKFSKNTAVWCVAFCADF-TIITGDS--- 222 (708)
Q Consensus 160 ~~~~s~d~~~l~~~~~-----d-~i~iwd~~~------~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~~~~~--- 222 (708)
.+.|+|||++|+..+. + .|.+||+.+ +. ....+... ...+.. .|+|+| .++..+.
T Consensus 237 ~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~-------~~~~~~-~~s~dg~~l~~~s~~~~ 308 (710)
T 2xdw_A 237 GAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDN-------FEGEYD-YVTNEGTVFTFKTNRHS 308 (710)
T ss_dssp EEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECS-------SSSCEE-EEEEETTEEEEEECTTC
T ss_pred EEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCC-------CCcEEE-EEeccCCEEEEEECCCC
Confidence 9999999999987654 6 899999986 53 34455433 222333 477877 4544433
Q ss_pred -CCcEEEEeCCCCe--eEEEeecccc--CeEEEEEeCCCCEEEEEecCCe--EEEEEccCCcccccCCCCCCCCcceEEe
Q psy12614 223 -GGFVRFWDGKTGV--QWSDVKTHKK--DILALTVSEDENYLYCAGVDPT--VVCFQRTRKPQVCSTSGPEQGSSVWVRS 295 (708)
Q Consensus 223 -dg~i~~wd~~~~~--~~~~~~~~~~--~i~~~~~s~~~~~l~~~~~dg~--i~iw~~~~~~~~~~~~g~~~~~~~~~~~ 295 (708)
.+.|.+||+.++. ....+..+.. .+..++|++++.++++...++. |.+|++.+ |+ ..
T Consensus 309 ~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~--------g~--------~~ 372 (710)
T 2xdw_A 309 PNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLAT--------GA--------LL 372 (710)
T ss_dssp TTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTT--------CC--------EE
T ss_pred CCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCC--------CC--------EE
Confidence 2469999998764 2344444433 6778999987878888888885 55667655 54 34
Q ss_pred EEEeccccceEEEEEe--CCEEEEE-c---CCCeEEEEeCCCCc
Q psy12614 296 VNRVIHEGDVKSLALH--GNRLYSG-G---LDSYLSLSYYPPKT 333 (708)
Q Consensus 296 ~~~~~~~~~v~~l~~~--~~~l~s~-~---~d~~i~iw~~~~~~ 333 (708)
..+..+.+.+..++++ ++.++.. + ..+.+..||+.++.
T Consensus 373 ~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 373 KIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp EEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred EecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 5566667778888887 5455432 2 34689999987654
|
| >2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii} | Back alignment and structure |
|---|
Probab=99.61 E-value=8.3e-12 Score=121.52 Aligned_cols=275 Identities=8% Similarity=-0.019 Sum_probs=190.1
Q ss_pred CCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECCCC
Q psy12614 24 PEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMRRL 101 (708)
Q Consensus 24 ~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~ 101 (708)
.....+.+++++++|++.++...++.|.+||.. ++.....+..+. ..+.++++. +...++...++.|..||.. +
T Consensus 17 ~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~--~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g 92 (300)
T 2qc5_A 17 IPDSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPD--AKVMCLIVSSLGDIWFTENGANKIGKLSKK-G 92 (300)
T ss_dssp STTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTT--CCEEEEEECTTSCEEEEETTTTEEEEECTT-S
T ss_pred CCCCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCCC--CcceeEEECCCCCEEEEecCCCeEEEECCC-C
Confidence 345688999999999988777678899999988 665543333444 679999998 6666666668899999988 5
Q ss_pred eEeE-EEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEE
Q psy12614 102 NIKS-STAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVR 179 (708)
Q Consensus 102 ~~~~-~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~ 179 (708)
+... .+......+.++++.++|+++++...++.|..+|.. ++... ..+......+..+++.++++..++...+ .|.
T Consensus 93 ~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~-~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~ 170 (300)
T 2qc5_A 93 GFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYE-YDLPNKGSYPAFITLGSDNALWFTENQNNSIG 170 (300)
T ss_dssp CEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEE-EECSSTTCCEEEEEECTTSSEEEEETTTTEEE
T ss_pred CeEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEE-ccCCCCCCCceeEEECCCCCEEEEecCCCeEE
Confidence 5432 222244678999999999887776667889999987 65542 2333345678999999999976666656 999
Q ss_pred EEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEEEEc-CCCcEEEEeCCCCeeEEE-eeccccCeEEEEEeCCCC
Q psy12614 180 VWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGD-SGGFVRFWDGKTGVQWSD-VKTHKKDILALTVSEDEN 257 (708)
Q Consensus 180 iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~-~dg~i~~wd~~~~~~~~~-~~~~~~~i~~~~~s~~~~ 257 (708)
.+|. +++... +... .....+..+++.++|.+..+. ..+.|.+||. +++.... +..+...+.+++++++|+
T Consensus 171 ~~~~-~g~~~~-~~~~-----~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~ 242 (300)
T 2qc5_A 171 RITN-TGKLEE-YPLP-----TNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISEYDIPTPNARPHAITAGKNSE 242 (300)
T ss_dssp EECT-TCCEEE-EECS-----STTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTC
T ss_pred EECC-CCcEEE-eeCC-----CCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEEEECCCCCCCceEEEECCCCC
Confidence 9998 665543 3322 124568899999999755554 5678999998 5554332 333456788999999998
Q ss_pred EEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe-CCEEEEEcCCCeEEEEeC
Q psy12614 258 YLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH-GNRLYSGGLDSYLSLSYY 329 (708)
Q Consensus 258 ~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~-~~~l~s~~~d~~i~iw~~ 329 (708)
..++...++.|..|+.. ++ . ....+......+.++++. ...|..++.. .|..++.
T Consensus 243 l~v~~~~~~~i~~~~~~---------g~------~-~~~~~~~~~~~~~~i~~~~~g~l~v~~~~-~i~~~~p 298 (300)
T 2qc5_A 243 IWFTEWGANQIGRITND---------NT------I-QEYQLQTENAEPHGITFGKDGSVWFALKC-KIGKLNL 298 (300)
T ss_dssp EEEEETTTTEEEEECTT---------SC------E-EEEECCSTTCCCCCEEECTTSCEEEECSS-EEEEEEE
T ss_pred EEEeccCCCeEEEECCC---------Cc------E-EEEECCccCCccceeEeCCCCCEEEEccC-ceEEeCC
Confidence 66666567899999984 32 0 111122234567788887 3334444444 6655554
|
| >3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae} | Back alignment and structure |
|---|
Probab=99.60 E-value=1.5e-12 Score=123.99 Aligned_cols=186 Identities=12% Similarity=0.108 Sum_probs=149.5
Q ss_pred CCEEEEEcCCCcEEEEECCCCeEeEEEeecC-CceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccc-cccE
Q psy12614 81 NDRLFSGGLQGFVNEYDMRRLNIKSSTAVTS-GTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQ-QGRI 158 (708)
Q Consensus 81 ~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~-~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~-~~~v 158 (708)
++.|++++.++.|.+||.++|+.+.++..+. ..+.+++++|+|++++ +.++.|..||. +++.+. .+..+ ...+
T Consensus 5 ~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W--~~~~~~~~~~ 79 (276)
T 3no2_A 5 QHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELW--NIAAPAGCEM 79 (276)
T ss_dssp CEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEE--EEECCTTCEE
T ss_pred CcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEE--EEcCCCCccc
Confidence 6788999999999999999999999998776 4789999999999888 45778999999 788774 33333 3468
Q ss_pred EEEEECCCCCEEEEecC-C-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCe
Q psy12614 159 LCTAWHSSGDYLVTGCA-A-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGV 235 (708)
Q Consensus 159 ~~~~~s~d~~~l~~~~~-d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~ 235 (708)
.++.+.+||+.+++.+. + .|..+|. +|+.+.++....... .+......+++.++|. +++...++.|..||.+ |+
T Consensus 80 ~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~-~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~ 156 (276)
T 3no2_A 80 QTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIE-RPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQ 156 (276)
T ss_dssp EEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCS-SGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SC
T ss_pred cccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCC-cccccccCceECCCCCEEEEecCCCEEEEECCC-CC
Confidence 89999999999999887 6 8888885 788888877542100 1123345567888996 7778889999999987 99
Q ss_pred eEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccC
Q psy12614 236 QWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTR 275 (708)
Q Consensus 236 ~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~ 275 (708)
.+.++... ..+.++...++++.++++..++.|..+|..+
T Consensus 157 ~~w~~~~~-~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~t 195 (276)
T 3no2_A 157 LLNSVKLS-GTPFSSAFLDNGDCLVACGDAHCFVQLNLES 195 (276)
T ss_dssp EEEEEECS-SCCCEEEECTTSCEEEECBTTSEEEEECTTT
T ss_pred EEEEEECC-CCccceeEcCCCCEEEEeCCCCeEEEEeCcC
Confidence 98888754 4556788899999999888888999999998
|
| >3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ... | Back alignment and structure |
|---|
Probab=99.58 E-value=3.4e-12 Score=124.63 Aligned_cols=292 Identities=11% Similarity=0.060 Sum_probs=197.6
Q ss_pred EEEEcCCCCEEEEEeC-----CCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEc----------CCCcE
Q psy12614 31 CIACEPKSSRLAVSRA-----DQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGG----------LQGFV 93 (708)
Q Consensus 31 ~~~~s~~~~~la~~~~-----dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~----------~d~~i 93 (708)
.....|+++++.+... ++.|.+.|..+++.+. .+.... .+ . ++++ |+++++++ .++.|
T Consensus 37 ~~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~-~I~vG~--~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~V 111 (386)
T 3sjl_D 37 LEAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIG-MIDGGF--LP-N-PVVADDGSFIAHASTVFSRIARGERTDYV 111 (386)
T ss_dssp CCCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEE-EEEECS--SC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEE
T ss_pred eeccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEE-EEECCC--CC-c-EEECCCCCEEEEEcccccccccCCCCCEE
Confidence 3556799999888865 5799999999999887 555444 44 4 9999 88887765 36789
Q ss_pred EEEECCCCeEeEEEeecC-------CceEEEEEecCCCEEEEEeC--CCcEEEEEccCCcEEEEEecccccccEEEEEEC
Q psy12614 94 NEYDMRRLNIKSSTAVTS-------GTCWCLSVHKKKRLLAAGTE--QGHINLFQISDEGLLYEKLLDRQQGRILCTAWH 164 (708)
Q Consensus 94 ~vwd~~~~~~~~~~~~~~-------~~v~~~~~s~~~~~la~~~~--d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s 164 (708)
.+||..+++.+..+.... .....++|+|||++|+++.. ++.|.++|..+++.+......+. ...+.
T Consensus 112 sviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g~-----~~~~P 186 (386)
T 3sjl_D 112 EVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDC-----YHIFP 186 (386)
T ss_dssp EEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE-----EEEEE
T ss_pred EEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCCc-----ceeec
Confidence 999999999988876432 24667999999999988764 68999999999998743333221 22233
Q ss_pred CCCCEEEEecCC-eEEEEEcCC-CceEEEEEecccCCCCCceeEE-EEEE-ccCCEEEEEcCCCcEEEEeCCCCe--eEE
Q psy12614 165 SSGDYLVTGCAA-AVRVWDIHK-GHAIHKMSLDKSSKFSKNTAVW-CVAF-CADFTIITGDSGGFVRFWDGKTGV--QWS 238 (708)
Q Consensus 165 ~d~~~l~~~~~d-~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~v~-~~~~-~~~~~l~~~~~dg~i~~wd~~~~~--~~~ 238 (708)
...+.+++.+.| .+.+.++.+ ++......... . .....+. ...| .++|+++..+.+|.|++.|..++. .+.
T Consensus 187 ~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~--~-~~~~~~~~~~~~~~~dG~~~~vs~~g~V~v~d~~~~~~~v~~ 263 (386)
T 3sjl_D 187 TAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVF--H-PEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLP 263 (386)
T ss_dssp EETTEEEEEETTSCEEEEECCSSSCCEEEECCCC--S-CTTSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTSSCEECC
T ss_pred CCCceeEEECCCCCEEEEECCCCCeEEEeeccee--c-cccccccccceeEcCCCcEEEEeCCCEEEEEECCCCcceeec
Confidence 344566676777 777788765 55432221110 0 0012221 2355 478887767778999999997654 222
Q ss_pred Eee----------ccccCeEEEEEeCCCCEEEEEec----------CCeEEEEEccCCcccccCCCCCCCCcceEEeEEE
Q psy12614 239 DVK----------THKKDILALTVSEDENYLYCAGV----------DPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNR 298 (708)
Q Consensus 239 ~~~----------~~~~~i~~~~~s~~~~~l~~~~~----------dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~ 298 (708)
.+. ........+++++++++++.... .+.|.++|..+ ++ ....+
T Consensus 264 ~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t--------~k--------v~~~i 327 (386)
T 3sjl_D 264 AVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKT--------GE--------RLAKF 327 (386)
T ss_dssp CEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTT--------CC--------EEEEE
T ss_pred ceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCC--------Ce--------EEEEE
Confidence 221 01234456888999999988753 24799999988 65 23333
Q ss_pred eccccceEEEEEe--CC-EEEE-EcCCCeEEEEeCCCCceeecCccCCCCceEEEEcC
Q psy12614 299 VIHEGDVKSLALH--GN-RLYS-GGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKD 352 (708)
Q Consensus 299 ~~~~~~v~~l~~~--~~-~l~s-~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~ 352 (708)
.. ...+.+++++ ++ +|++ ...++.|.++|..+.+.........++..+.+++|
T Consensus 328 ~v-g~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i~~~~~p~~l~~s~d 384 (386)
T 3sjl_D 328 EM-GHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQLGHGPQVITTAD 384 (386)
T ss_dssp EE-EEEECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEEEECCCCSSCCEEEECC
T ss_pred EC-CCCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEEEecCCCCCceeEECCc
Confidence 22 2367789998 54 5555 45689999999998874444335567777888876
|
| >3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ... | Back alignment and structure |
|---|
Probab=99.58 E-value=2.5e-12 Score=125.58 Aligned_cols=296 Identities=11% Similarity=0.049 Sum_probs=191.7
Q ss_pred EEEecCCCEEEEEeC-----CCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEec----------CC-eEEE
Q psy12614 117 LSVHKKKRLLAAGTE-----QGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGC----------AA-AVRV 180 (708)
Q Consensus 117 ~~~s~~~~~la~~~~-----d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~----------~d-~i~i 180 (708)
....|+++.+++... ++.|.++|..+++.+ ..+.....+ . ++++|||+++++++ .+ .|.+
T Consensus 38 ~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~--~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~Vsv 113 (386)
T 3sjl_D 38 EAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVI--GMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEV 113 (386)
T ss_dssp CCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEE--EEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEE
T ss_pred eccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEE--EEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEE
Confidence 455789998888765 679999999999887 444433344 4 99999999988775 24 8999
Q ss_pred EEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcC--CCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCC
Q psy12614 181 WDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDS--GGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDEN 257 (708)
Q Consensus 181 wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~--dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~ 257 (708)
||..+++.+..+..+...+.........++|+|||+ ++++.. ++.|.++|+.+++.+.++.... . ...+....+
T Consensus 114 iD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g--~-~~~~P~g~~ 190 (386)
T 3sjl_D 114 FDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPD--C-YHIFPTAPD 190 (386)
T ss_dssp ECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS--E-EEEEEEETT
T ss_pred EECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCC--c-ceeecCCCc
Confidence 999999999998765200000012355789999996 555543 6899999999999998886422 1 233433456
Q ss_pred EEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEE--EeccccceE-EEEEe--CCEEEEEcCCCeEEEEeCCCC
Q psy12614 258 YLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVN--RVIHEGDVK-SLALH--GNRLYSGGLDSYLSLSYYPPK 332 (708)
Q Consensus 258 ~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~--~~~~~~~v~-~l~~~--~~~l~s~~~d~~i~iw~~~~~ 332 (708)
.+++.+.||.+.+.++.+. ++ ...... +..-...+. ...|. +..++..+.+|.+.+.|+.+.
T Consensus 191 ~~~~~~~DG~~~~v~~~~~-------g~------v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~vs~~g~V~v~d~~~~ 257 (386)
T 3sjl_D 191 TFFMHCRDGSLAKVAFGTE-------GT------PEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSG 257 (386)
T ss_dssp EEEEEETTSCEEEEECCSS-------SC------CEEEECCCCSCTTSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTS
T ss_pred eeEEECCCCCEEEEECCCC-------Ce------EEEeecceeccccccccccceeEcCCCcEEEEeCCCEEEEEECCCC
Confidence 7777788888888887650 11 000000 000011121 23553 444545667899999999766
Q ss_pred ceeecC------------c-cCCCCceEEEEcCCcEEEEEc-----------CCeEEEEEecCCCCCCCCCCCCCCcccC
Q psy12614 333 TLVKYP------------C-TLAQSTPVSLAKDIQHVLLQY-----------TSHLELWSLGSAQSTDLSSHSNTTGVPL 388 (708)
Q Consensus 333 ~~~~~~------------~-~~~~~~~~~~s~~~~~l~~~~-----------~~~i~i~~~~~~~~~~~~~~~~~~~~~~ 388 (708)
...... + .......++++++++.+.... .+.|.++|..+.+
T Consensus 258 ~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~k--------------- 322 (386)
T 3sjl_D 258 DAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGE--------------- 322 (386)
T ss_dssp SCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCC---------------
T ss_pred cceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCe---------------
Confidence 421111 0 012335688899998887742 2468888888866
Q ss_pred CCCceEEEEEEecCCCceEEEEeCCCCc-EEEEE-c-CCceEEEEEEecCCcceeEEeecCCcccccceeEEEEEecC
Q psy12614 389 LSFPRLIVKMSAVNNATIRCSVVSNDGK-YVAYS-T-ESCVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVLISAD 463 (708)
Q Consensus 389 ~~~~~~~~~~~~~~~~~i~~~~~s~~g~-~l~~~-~-d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~d 463 (708)
.+.++..+ ..+..+++++|++ +|+++ . ++.|.++|..+ .+ .+.++. ..+|.. . |.+++|
T Consensus 323 -----v~~~i~vg--~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t--~k-~~~~i~-~~~~p~--~---l~~s~d 384 (386)
T 3sjl_D 323 -----RLAKFEMG--HEIDSINVSQDEKPLLYALSTGDKTLYIHDAES--GE-ELRSVN-QLGHGP--Q---VITTAD 384 (386)
T ss_dssp -----EEEEEEEE--EEECEEEECSSSSCEEEEEETTTTEEEEEETTT--CC-EEEEEC-CCCSSC--C---EEEECC
T ss_pred -----EEEEEECC--CCcceEEECCCCCeEEEEEcCCCCeEEEEECCC--Cc-EEEEec-CCCCCc--e---eEECCc
Confidence 44444443 3678999999997 66663 3 89999999876 33 444443 344432 4 777776
|
| >1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ... | Back alignment and structure |
|---|
Probab=99.57 E-value=9.4e-13 Score=129.24 Aligned_cols=241 Identities=10% Similarity=0.027 Sum_probs=168.5
Q ss_pred CCCCcEEEEEEcCCCCEEEE-------EeCCCcEEEEeCCCCCeEEEEE---ecCCCCCcEEEEEEe-C-CEEEEEcCCC
Q psy12614 24 PEPKVINCIACEPKSSRLAV-------SRADQSIEIWDISETPHVDRVF---IGDPLSNSIECLTWF-N-DRLFSGGLQG 91 (708)
Q Consensus 24 ~h~~~v~~~~~s~~~~~la~-------~~~dg~v~iwd~~~~~~~~~~~---~~h~~~~~v~~l~~~-~-~~l~s~~~d~ 91 (708)
..-....+++|+++|+++++ +..++.|.+||..+++...... .++. ..+.+++++ . ..|+.++..+
T Consensus 15 ~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~--~~~~~i~~~~~~g~l~v~~~~~ 92 (314)
T 1pjx_A 15 EDIPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYG--GIPAGCQCDRDANQLFVADMRL 92 (314)
T ss_dssp CCCTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEE--CCEEEEEECSSSSEEEEEETTT
T ss_pred ccCCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCC--CCCceEEEecCCCcEEEEECCC
Confidence 33456789999999988877 5678899999998887643121 1244 678999998 5 7777776666
Q ss_pred cEEEEECCCCeEeEE-Eee----cCCceEEEEEecCCCEEEEEeCC---------------CcEEEEEccCCcEEEEEec
Q psy12614 92 FVNEYDMRRLNIKSS-TAV----TSGTCWCLSVHKKKRLLAAGTEQ---------------GHINLFQISDEGLLYEKLL 151 (708)
Q Consensus 92 ~i~vwd~~~~~~~~~-~~~----~~~~v~~~~~s~~~~~la~~~~d---------------~~i~iwd~~~~~~~~~~~~ 151 (708)
.|.+||.+ ++.... ... ....+.+++++++|+++++...+ +.|..||.. ++.. .+
T Consensus 93 ~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~---~~ 167 (314)
T 1pjx_A 93 GLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMI---QV 167 (314)
T ss_dssp EEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEE---EE
T ss_pred CEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEE---Ee
Confidence 89999998 665433 221 12358899999999887776554 567777765 5543 22
Q ss_pred ccccccEEEEEEC----CCCCEEEEe-cCC-eEEEEEcC-CCceEE--EEEecccCCCCCc-eeEEEEEEccCCEEE-EE
Q psy12614 152 DRQQGRILCTAWH----SSGDYLVTG-CAA-AVRVWDIH-KGHAIH--KMSLDKSSKFSKN-TAVWCVAFCADFTII-TG 220 (708)
Q Consensus 152 ~~~~~~v~~~~~s----~d~~~l~~~-~~d-~i~iwd~~-~~~~~~--~~~~~~~~~~~~~-~~v~~~~~~~~~~l~-~~ 220 (708)
..+......++|+ |+++.|+.+ ..+ .|.+||+. +++... .+.... .+. ..+..+++.++|++. +.
T Consensus 168 ~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~----~~~~~~p~~i~~d~~G~l~v~~ 243 (314)
T 1pjx_A 168 DTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIP----GTHEGGADGMDFDEDNNLLVAN 243 (314)
T ss_dssp EEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECC----CCSSCEEEEEEEBTTCCEEEEE
T ss_pred ccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECC----CCCCCCCCceEECCCCCEEEEE
Confidence 2233456889999 999766555 455 99999986 454221 111110 112 567889999999854 44
Q ss_pred cCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEE-ecCCeEEEEEccC
Q psy12614 221 DSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCA-GVDPTVVCFQRTR 275 (708)
Q Consensus 221 ~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~-~~dg~i~iw~~~~ 275 (708)
..++.|.+||..+++.+..+..+...+.+++++|+++.|+++ ..++.|..|+...
T Consensus 244 ~~~~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 244 WGSSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp ETTTEEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred cCCCEEEEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 467899999998787777777666889999999999966555 4567899999875
|
| >2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=99.57 E-value=3.4e-13 Score=147.69 Aligned_cols=274 Identities=9% Similarity=-0.044 Sum_probs=177.4
Q ss_pred cCCCCEEEEEeCCC---cEEEE--eCCCCCeEEEEEe------cCCCCCcEEEEEEe--CCEEE-----EEcCCCcEEEE
Q psy12614 35 EPKSSRLAVSRADQ---SIEIW--DISETPHVDRVFI------GDPLSNSIECLTWF--NDRLF-----SGGLQGFVNEY 96 (708)
Q Consensus 35 s~~~~~la~~~~dg---~v~iw--d~~~~~~~~~~~~------~h~~~~~v~~l~~~--~~~l~-----s~~~d~~i~vw 96 (708)
+|+|++++....++ .-.|| +...+.... .+. +|. ..+.+++|| |++|| .|+.+.+|++|
T Consensus 76 ~~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-l~d~~~~a~~~~--~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~ 152 (695)
T 2bkl_A 76 SRRNGRFFYVRTHKDKEKAILYWRQGESGQEKV-LLDPNGWSKDGT--VSLGTWAVSWDGKKVAFAQKPNAADEAVLHVI 152 (695)
T ss_dssp EEETTEEEEEEECTTCSSCEEEEEESTTSCCEE-EECGGGSSSSSC--EEEEEEEECTTSSEEEEEEEETTCSCCEEEEE
T ss_pred EEECCEEEEEEEcCCCeEEEEEEEcCCCCCcEE-EEchHHhccCCC--EEEEEEEECCCCCEEEEEECCCCCceEEEEEE
Confidence 48999998876543 34444 444444322 333 344 579999999 88888 34445789999
Q ss_pred ECCCCeEe-EEEeecCCceEEEEEecCCCEEEEEeCCCc-------------EEEEEccCCcE--EEEEecccccccEEE
Q psy12614 97 DMRRLNIK-SSTAVTSGTCWCLSVHKKKRLLAAGTEQGH-------------INLFQISDEGL--LYEKLLDRQQGRILC 160 (708)
Q Consensus 97 d~~~~~~~-~~~~~~~~~v~~~~~s~~~~~la~~~~d~~-------------i~iwd~~~~~~--~~~~~~~~~~~~v~~ 160 (708)
|+.+++.+ .. .........++|+|||+.|+.++.|.. |++|++.++.. ........+...+..
T Consensus 153 dl~tg~~~~~~-~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~ 231 (695)
T 2bkl_A 153 DVDSGEWSKVD-VIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQ 231 (695)
T ss_dssp ETTTCCBCSSC-CBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEE
T ss_pred ECCCCCCcCCc-ccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEE
Confidence 99998865 21 111111267999999999999988766 99999998762 211344455667899
Q ss_pred EEECCCCCEEEEecC----C-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEEEEcC----CCcEEEEeC
Q psy12614 161 TAWHSSGDYLVTGCA----A-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDS----GGFVRFWDG 231 (708)
Q Consensus 161 ~~~s~d~~~l~~~~~----d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~----dg~i~~wd~ 231 (708)
+.|+|||++|+..+. . .|.+|+..+++. ..+... ...+....+ ++|.++..+. ++.|.+||+
T Consensus 232 ~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~-~~l~~~-------~~~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~ 302 (695)
T 2bkl_A 232 SDLSRDGKYLFVYILRGWSENDVYWKRPGEKDF-RLLVKG-------VGAKYEVHA-WKDRFYVLTDEGAPRQRVFEVDP 302 (695)
T ss_dssp EEECTTSCCEEEEEEETTTEEEEEEECTTCSSC-EEEEEC-------SSCCEEEEE-ETTEEEEEECTTCTTCEEEEEBT
T ss_pred EEECCCCCEEEEEEeCCCCceEEEEEcCCCCce-EEeecC-------CCceEEEEe-cCCcEEEEECCCCCCCEEEEEeC
Confidence 999999998876542 2 677787655543 344433 233344445 5665444332 578999999
Q ss_pred CCCee---EEEeecc-ccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEecc-ccceE
Q psy12614 232 KTGVQ---WSDVKTH-KKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIH-EGDVK 306 (708)
Q Consensus 232 ~~~~~---~~~~~~~-~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~v~ 306 (708)
.+++. ...+..+ ...+..++++ ++.++++...|+..++|.+.. .|+ ....+..+ .+.+.
T Consensus 303 ~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~-------~g~--------~~~~l~~~~~~~v~ 366 (695)
T 2bkl_A 303 AKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYLKDATSEVRVATL-------KGK--------PVRTVQLPGVGAAS 366 (695)
T ss_dssp TBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEEEET-------TCC--------EEEECCCSSSSEEC
T ss_pred CCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeC-------CCC--------eeEEecCCCCeEEE
Confidence 87753 3333333 4467888888 677888888899888887652 022 23334444 45566
Q ss_pred EEEEe--CCEEEE----EcCCCeEEEEeCCCCceeec
Q psy12614 307 SLALH--GNRLYS----GGLDSYLSLSYYPPKTLVKY 337 (708)
Q Consensus 307 ~l~~~--~~~l~s----~~~d~~i~iw~~~~~~~~~~ 337 (708)
.++++ ++.++. ....+.+.+||+.++....+
T Consensus 367 ~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~~~~l 403 (695)
T 2bkl_A 367 NLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGKSELW 403 (695)
T ss_dssp CCBSCTTCSEEEEEEEETTEEEEEEEEETTTCCEEEE
T ss_pred EeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcEEEE
Confidence 67776 555552 23357899999988764433
|
| >3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis} | Back alignment and structure |
|---|
Probab=99.56 E-value=2.5e-12 Score=126.51 Aligned_cols=258 Identities=6% Similarity=-0.077 Sum_probs=178.4
Q ss_pred CCCcEEEEECCCCeEeEEEe------ecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEE
Q psy12614 89 LQGFVNEYDMRRLNIKSSTA------VTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTA 162 (708)
Q Consensus 89 ~d~~i~vwd~~~~~~~~~~~------~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~ 162 (708)
.+++|.++|.++++....+. ........+++. +++.+++...++.|.+||..+++.+ ..+. .......++
T Consensus 15 ~~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~--~~i~-~~~~p~~i~ 90 (328)
T 3dsm_A 15 SNATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEV--GRIT-GFTSPRYIH 90 (328)
T ss_dssp CCBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEE--EEEE-CCSSEEEEE
T ss_pred CCceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEE-CCEEEEEEcCCCEEEEEECcccEEE--EEcC-CCCCCcEEE
Confidence 37899999999998765441 122346778874 3445555566799999999999886 3443 345688999
Q ss_pred ECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEEEEc--CCCcEEEEeCCCCeeEEE
Q psy12614 163 WHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGD--SGGFVRFWDGKTGVQWSD 239 (708)
Q Consensus 163 ~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~--~dg~i~~wd~~~~~~~~~ 239 (708)
++++++..++...+ .|.+||..+++....+..+... ........+++ .++++++++ .++.|.++|..+++.+..
T Consensus 91 ~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~--~~~~~p~~i~~-~~~~lyv~~~~~~~~v~viD~~t~~~~~~ 167 (328)
T 3dsm_A 91 FLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMD--MESGSTEQMVQ-YGKYVYVNCWSYQNRILKIDTETDKVVDE 167 (328)
T ss_dssp EEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCC--TTTCBCCCEEE-ETTEEEEEECTTCCEEEEEETTTTEEEEE
T ss_pred EeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCcc--ccCCCcceEEE-ECCEEEEEcCCCCCEEEEEECCCCeEEEE
Confidence 99998544444366 9999999999988887764200 00114456666 566755554 488999999999998888
Q ss_pred eeccccCeEEEEEeCCCCEEEEEecC----------CeEEEEEccCCcccccCCCCCCCCcceEEeEEEecc-ccceEEE
Q psy12614 240 VKTHKKDILALTVSEDENYLYCAGVD----------PTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIH-EGDVKSL 308 (708)
Q Consensus 240 ~~~~~~~i~~~~~s~~~~~l~~~~~d----------g~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~v~~l 308 (708)
+.. ......++++|+|++++++..+ +.|.++|..+ ++ ....+... ......+
T Consensus 168 i~~-g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t--------~~--------v~~~~~~~~g~~p~~l 230 (328)
T 3dsm_A 168 LTI-GIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAET--------FT--------VEKQFKFKLGDWPSEV 230 (328)
T ss_dssp EEC-SSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTT--------TE--------EEEEEECCTTCCCEEE
T ss_pred EEc-CCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCC--------Ce--------EEEEEecCCCCCceeE
Confidence 764 3445789999999876666544 7899999987 53 22233222 2368899
Q ss_pred EEe--CCEEEEEcCCCeEEEEeCCCCceeecC-cc--CCCCceEEEEc-CCcEEEEE-----cCCeEEEEEecCCC
Q psy12614 309 ALH--GNRLYSGGLDSYLSLSYYPPKTLVKYP-CT--LAQSTPVSLAK-DIQHVLLQ-----YTSHLELWSLGSAQ 373 (708)
Q Consensus 309 ~~~--~~~l~s~~~d~~i~iw~~~~~~~~~~~-~~--~~~~~~~~~s~-~~~~l~~~-----~~~~i~i~~~~~~~ 373 (708)
+++ ++.|+.+.. .|.+||..+..+.... .. ...+..++++| ++.+.++. .++.|.+|+.. ++
T Consensus 231 a~~~d~~~lyv~~~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~ 303 (328)
T 3dsm_A 231 QLNGTRDTLYWINN--DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-GK 303 (328)
T ss_dssp EECTTSCEEEEESS--SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT-CC
T ss_pred EEecCCCEEEEEcc--EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC-CC
Confidence 999 777777665 8999999887653221 01 23456799999 55555554 35789999987 44
|
| >1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A | Back alignment and structure |
|---|
Probab=99.54 E-value=1.4e-12 Score=124.77 Aligned_cols=235 Identities=10% Similarity=-0.085 Sum_probs=162.1
Q ss_pred cEEEEEEe--CCEEE-EEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEE
Q psy12614 73 SIECLTWF--NDRLF-SGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEK 149 (708)
Q Consensus 73 ~v~~l~~~--~~~l~-s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~ 149 (708)
...+++++ ++.++ +...++.|.+||..++........+...+.+++++++|+++++.. ++.|.+||..+.... .
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~--~ 101 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQT--V 101 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCCE--E
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceEe--e
Confidence 78899998 66555 436789999999876553322223345788999999998666554 889999998876553 2
Q ss_pred ecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEE-EEEcCCCcEE
Q psy12614 150 LLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTI-ITGDSGGFVR 227 (708)
Q Consensus 150 ~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l-~~~~~dg~i~ 227 (708)
........+..++++++|+.+++...+ .|.+|+..+........ .....+.++++.++|++ ++...++.|.
T Consensus 102 ~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~-------~~~~~p~~i~~~~~g~l~v~~~~~~~i~ 174 (270)
T 1rwi_B 102 LPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPF-------TGLNDPDGVAVDNSGNVYVTDTDNNRVV 174 (270)
T ss_dssp CCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCC-------CSCCSCCCEEECTTCCEEEEEGGGTEEE
T ss_pred eecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeecc-------ccCCCceeEEEeCCCCEEEEECCCCEEE
Confidence 222233568999999999977776666 89999765544332111 11345778999999974 4555578999
Q ss_pred EEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEE
Q psy12614 228 FWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKS 307 (708)
Q Consensus 228 ~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~ 307 (708)
+||...+........+...+.+++++++|+.+++...++.|.+|+... .. .......+...+.+
T Consensus 175 ~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~--------~~--------~~~~~~~~~~~p~~ 238 (270)
T 1rwi_B 175 KLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGS--------TT--------STVLPFTGLNTPLA 238 (270)
T ss_dssp EECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTC--------SC--------CEECCCCSCSCEEE
T ss_pred EEecCCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCC--------Cc--------ceeeccCCCCCcee
Confidence 999877665444333446788999999997777776788999999876 32 11111122356888
Q ss_pred EEEe--CCEEEEEcCCCeEEEEeCCCCc
Q psy12614 308 LALH--GNRLYSGGLDSYLSLSYYPPKT 333 (708)
Q Consensus 308 l~~~--~~~l~s~~~d~~i~iw~~~~~~ 333 (708)
++++ ++++++...++.|+++++....
T Consensus 239 i~~~~~g~l~v~~~~~~~v~~~~~~~~~ 266 (270)
T 1rwi_B 239 VAVDSDRTVYVADRGNDRVVKLTSLEHH 266 (270)
T ss_dssp EEECTTCCEEEEEGGGTEEEEECCCGGG
T ss_pred EEECCCCCEEEEECCCCEEEEEcCCCcc
Confidence 9998 7788888899999999987653
|
| >2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H* | Back alignment and structure |
|---|
Probab=99.52 E-value=6.7e-11 Score=117.73 Aligned_cols=263 Identities=11% Similarity=-0.032 Sum_probs=176.8
Q ss_pred CCEEEEEcC--CC---cEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEe----------CCCcEEEEEccCCcE
Q psy12614 81 NDRLFSGGL--QG---FVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGT----------EQGHINLFQISDEGL 145 (708)
Q Consensus 81 ~~~l~s~~~--d~---~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~----------~d~~i~iwd~~~~~~ 145 (708)
++++++... .+ +|.++|..+++.+..+..-..+ .++++|||++|+++. .++.|.+||..+.+.
T Consensus 32 ~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~ 109 (373)
T 2mad_H 32 GRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLP 109 (373)
T ss_pred CCEEEEeCCcccCCccEEEEEECCCCeEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcE
Confidence 455555543 22 8899999999988877754443 999999999999875 367899999998877
Q ss_pred EEEEecc--cc---cccEEEEEECCCCCEEEEecC--C-eEEEEEcCCCceEEE-EEecccCCCCCceeEEEEEEccCC-
Q psy12614 146 LYEKLLD--RQ---QGRILCTAWHSSGDYLVTGCA--A-AVRVWDIHKGHAIHK-MSLDKSSKFSKNTAVWCVAFCADF- 215 (708)
Q Consensus 146 ~~~~~~~--~~---~~~v~~~~~s~d~~~l~~~~~--d-~i~iwd~~~~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~- 215 (708)
+....+. .. ......++|+|||++|++++. + .|.++| .+++.+.. +..+ . ++.+.|++
T Consensus 110 ~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~--------~---~~~~~~~~~ 177 (373)
T 2mad_H 110 IADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSP--------T---CYHIHPGAP 177 (373)
T ss_pred EEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCC--------c---eEEEEeCCC
Confidence 6333232 00 123458999999999998763 4 899999 99998877 6542 1 24455666
Q ss_pred -EEEEEcCCCcEEEEeCCCCeeEEEee-----ccccC-eEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCC
Q psy12614 216 -TIITGDSGGFVRFWDGKTGVQWSDVK-----THKKD-ILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQG 288 (708)
Q Consensus 216 -~l~~~~~dg~i~~wd~~~~~~~~~~~-----~~~~~-i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~ 288 (708)
.+++.+.||.+.++|. +++...... ....+ .....+.+++..++..+..+.+.+.|+.. +.
T Consensus 178 ~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~--------~~--- 245 (373)
T 2mad_H 178 STFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISA--------AG--- 245 (373)
T ss_pred ceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccC--------Cc---
Confidence 3777888999999999 887663322 11112 12356677766655555788999999875 21
Q ss_pred CcceEEeEEEec----------cccceEEEEEe--CCEEEEEcC----------CCeEEEEeCCCCce-eecCccCCCCc
Q psy12614 289 SSVWVRSVNRVI----------HEGDVKSLALH--GNRLYSGGL----------DSYLSLSYYPPKTL-VKYPCTLAQST 345 (708)
Q Consensus 289 ~~~~~~~~~~~~----------~~~~v~~l~~~--~~~l~s~~~----------d~~i~iw~~~~~~~-~~~~~~~~~~~ 345 (708)
... ...+.. .......+.++ ++.++.+.. ++.|.++|..+.+. ..+. ......
T Consensus 246 -~~v--~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~-~g~~p~ 321 (373)
T 2mad_H 246 -ATN--KAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQIS-LGHDVD 321 (373)
T ss_pred -ceE--eeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEE-CCCCcC
Confidence 000 111110 11223335566 566665432 35799999998875 4454 334578
Q ss_pred eEEEEcCCc-EEEEE--cCCeEEEEEecCCC
Q psy12614 346 PVSLAKDIQ-HVLLQ--YTSHLELWSLGSAQ 373 (708)
Q Consensus 346 ~~~~s~~~~-~l~~~--~~~~i~i~~~~~~~ 373 (708)
.++++|||+ ++++. .++.|.++|..+.+
T Consensus 322 ~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~ 352 (373)
T 2mad_H 322 AISVAQDGGPDLYALSAGTEVLHIYDAGAGD 352 (373)
T ss_pred eEEECCCCCeEEEEEcCCCCeEEEEECCCCC
Confidence 999999999 66664 47899999998866
|
| >2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii} | Back alignment and structure |
|---|
Probab=99.52 E-value=1.9e-10 Score=111.74 Aligned_cols=269 Identities=11% Similarity=0.068 Sum_probs=187.7
Q ss_pred CcEEEEEEe--CCEEEEEcCCCcEEEEECCCCeEeE-EEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEE
Q psy12614 72 NSIECLTWF--NDRLFSGGLQGFVNEYDMRRLNIKS-STAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYE 148 (708)
Q Consensus 72 ~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~~~~~-~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~ 148 (708)
..+.++++. +...++...++.|.+||.. ++... .+......+.+++++++++++++...++.|..||.. ++...
T Consensus 20 ~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~~- 96 (300)
T 2qc5_A 20 SGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFTE- 96 (300)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEE-
T ss_pred CCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCeEE-
Confidence 678999998 6666666678999999988 55443 222334678999999999877776667889999988 65531
Q ss_pred EecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEEE-EcCCCcE
Q psy12614 149 KLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIIT-GDSGGFV 226 (708)
Q Consensus 149 ~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~-~~~dg~i 226 (708)
.........+..+++.++|+++++...+ .|..+|.. ++.. .+... .....+..+++.++|++.. ...++.|
T Consensus 97 ~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~-~~~~~-----~~~~~~~~i~~d~~g~l~v~~~~~~~i 169 (300)
T 2qc5_A 97 YPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIY-EYDLP-----NKGSYPAFITLGSDNALWFTENQNNSI 169 (300)
T ss_dssp EECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEE-EEECS-----STTCCEEEEEECTTSSEEEEETTTTEE
T ss_pred ecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEE-EccCC-----CCCCCceeEEECCCCCEEEEecCCCeE
Confidence 2333344678999999999988877766 99999987 6554 23222 1245688999999998554 4457889
Q ss_pred EEEeCCCCeeEEE-eeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccce
Q psy12614 227 RFWDGKTGVQWSD-VKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDV 305 (708)
Q Consensus 227 ~~wd~~~~~~~~~-~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v 305 (708)
..+|. +++.... ...+...+..++++++++..++....+.|..|+. + ++ . .......+...+
T Consensus 170 ~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~--------g~------~-~~~~~~~~~~~~ 232 (300)
T 2qc5_A 170 GRITN-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-T--------GE------I-SEYDIPTPNARP 232 (300)
T ss_dssp EEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-T--------CC------E-EEEECSSTTCCE
T ss_pred EEECC-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-C--------Cc------E-EEEECCCCCCCc
Confidence 99998 5654432 2234457889999999987776666778999998 4 32 1 111122345668
Q ss_pred EEEEEe--CCEEEEEcCCCeEEEEeCCCCceeec--CccCCCCceEEEEcCCcEEEEEcCCeEEEEEe
Q psy12614 306 KSLALH--GNRLYSGGLDSYLSLSYYPPKTLVKY--PCTLAQSTPVSLAKDIQHVLLQYTSHLELWSL 369 (708)
Q Consensus 306 ~~l~~~--~~~l~s~~~d~~i~iw~~~~~~~~~~--~~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~ 369 (708)
.+++++ +.+.++...++.|..++.. ..+..+ ......+..++++++|++.++... .|..++.
T Consensus 233 ~~i~~d~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~-~i~~~~p 298 (300)
T 2qc5_A 233 HAITAGKNSEIWFTEWGANQIGRITND-NTIQEYQLQTENAEPHGITFGKDGSVWFALKC-KIGKLNL 298 (300)
T ss_dssp EEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECCSTTCCCCCEEECTTSCEEEECSS-EEEEEEE
T ss_pred eEEEECCCCCEEEeccCCCeEEEECCC-CcEEEEECCccCCccceeEeCCCCCEEEEccC-ceEEeCC
Confidence 889888 6666666667899999984 343333 222446678999999997777664 6666664
|
| >1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum} | Back alignment and structure |
|---|
Probab=99.52 E-value=7.5e-13 Score=146.01 Aligned_cols=237 Identities=12% Similarity=0.090 Sum_probs=160.6
Q ss_pred CCCcEEEEEEcCCCCEEEEEeCC-----CcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe-CCEEEEEcCCCc------
Q psy12614 25 EPKVINCIACEPKSSRLAVSRAD-----QSIEIWDISETPHVDRVFIGDPLSNSIECLTWF-NDRLFSGGLQGF------ 92 (708)
Q Consensus 25 h~~~v~~~~~s~~~~~la~~~~d-----g~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~-~~~l~s~~~d~~------ 92 (708)
|...+..++|||||++||.+..+ ..|++||+.+++.+...+. . ..+..++|+ ++.|+.++.++.
T Consensus 161 ~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~~--~--~~~~~~~wspD~~l~~~~~~~~~~~~~~ 236 (741)
T 1yr2_A 161 GATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADELK--W--VKFSGLAWLGNDALLYSRFAEPKEGQAF 236 (741)
T ss_dssp --EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEEE--E--EESCCCEESTTSEEEEEECCCC------
T ss_pred CCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccCC--C--ceeccEEEECCCEEEEEEecCccccccc
Confidence 44478899999999999987543 3599999999987653222 1 223578898 667777765543
Q ss_pred --------EEEEECCCCeE--eEEEee--cCCceEEEEEecCCCEEEEEeCCC-----cEEEEEccCC--c-EEEEEecc
Q psy12614 93 --------VNEYDMRRLNI--KSSTAV--TSGTCWCLSVHKKKRLLAAGTEQG-----HINLFQISDE--G-LLYEKLLD 152 (708)
Q Consensus 93 --------i~vwd~~~~~~--~~~~~~--~~~~v~~~~~s~~~~~la~~~~d~-----~i~iwd~~~~--~-~~~~~~~~ 152 (708)
|.+|++.++.. ...+.. +...+..+.|||||++|+..+.++ .|++||+.++ + . ..+.
T Consensus 237 ~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~---~~l~ 313 (741)
T 1yr2_A 237 QALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPV---TALI 313 (741)
T ss_dssp --CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCC---EEEE
T ss_pred ccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCccc---EEec
Confidence 89999987652 222332 333588999999999998877544 8999999887 4 3 2333
Q ss_pred cccccEEEEEECCCCCEEEEecC----C-eEEEEEcCCCc-eEEEEEecccCCCCCceeEEEEEEccCCEEEEEcCCCcE
Q psy12614 153 RQQGRILCTAWHSSGDYLVTGCA----A-AVRVWDIHKGH-AIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFV 226 (708)
Q Consensus 153 ~~~~~v~~~~~s~d~~~l~~~~~----d-~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i 226 (708)
.+...+.... +|+|+.|+..+. + .|.+||+.++. ....+... +...+..+++..+..+++...++..
T Consensus 314 ~~~~~~~~~~-~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~------~~~~l~~~~~~~~~lv~~~~~dg~~ 386 (741)
T 1yr2_A 314 PDLKAQWDFV-DGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPE------SKDNLESVGIAGNRLFASYIHDAKS 386 (741)
T ss_dssp CSSSSCEEEE-EEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECC------CSSEEEEEEEEBTEEEEEEEETTEE
T ss_pred CCCCceEEEE-eccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecC------CCCeEEEEEEECCEEEEEEEECCEE
Confidence 4444444443 489998887764 3 59999998752 44444332 1445777888733236777778876
Q ss_pred EEEeCC-CCeeEEEeec-cccCeEEEEEeCCCCEEEEEe----cCCeEEEEEccC
Q psy12614 227 RFWDGK-TGVQWSDVKT-HKKDILALTVSEDENYLYCAG----VDPTVVCFQRTR 275 (708)
Q Consensus 227 ~~wd~~-~~~~~~~~~~-~~~~i~~~~~s~~~~~l~~~~----~dg~i~iw~~~~ 275 (708)
++|... ++.....+.. +...+..++++|+++.|+... ..+.|++||+.+
T Consensus 387 ~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~t 441 (741)
T 1yr2_A 387 QVLAFDLDGKPAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPAT 441 (741)
T ss_dssp EEEEEETTSCEEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTT
T ss_pred EEEEEeCCCCceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCC
Confidence 666443 4556666654 356788899999987666332 347899999987
|
| >3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A | Back alignment and structure |
|---|
Probab=99.50 E-value=2e-10 Score=115.74 Aligned_cols=307 Identities=12% Similarity=0.084 Sum_probs=196.1
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCC-------CCcE-EEEEEeCCEEEEEcCCCcEEEEECCCCeEeEEEe
Q psy12614 37 KSSRLAVSRADQSIEIWDISETPHVDRVFIGDPL-------SNSI-ECLTWFNDRLFSGGLQGFVNEYDMRRLNIKSSTA 108 (708)
Q Consensus 37 ~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~-------~~~v-~~l~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~ 108 (708)
++..|.+++.++.|..+|..+++.+- ....... ...+ ..+...++.++.++.++.|..+|.++|+.+....
T Consensus 52 ~~~~v~~~~~~g~v~a~d~~tG~~~W-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~ 130 (376)
T 3q7m_A 52 ADNVVYAADRAGLVKALNADDGKEIW-SVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSEKAQVYALNTSDGTVAWQTK 130 (376)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEE-EEECCC---CCSCCCCCEEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred ECCEEEEEcCCCeEEEEEccCCceee-eecCccccccccccCcccccCceEeCCEEEEEcCCCEEEEEECCCCCEEEEEe
Confidence 36678888889999999999998764 2222110 1233 3344448899999999999999999999887776
Q ss_pred ecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEeccccccc---EEEEEECCCCCEEEEecCC-eEEEEEcC
Q psy12614 109 VTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGR---ILCTAWHSSGDYLVTGCAA-AVRVWDIH 184 (708)
Q Consensus 109 ~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~---v~~~~~s~d~~~l~~~~~d-~i~iwd~~ 184 (708)
............ +..+++++.++.|..+|..+++............. ....... +..++.++.+ .+..+|..
T Consensus 131 ~~~~~~~~p~~~--~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~--~~~v~~g~~~g~l~~~d~~ 206 (376)
T 3q7m_A 131 VAGEALSRPVVS--DGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA--FGAAVVGGDNGRVSAVLME 206 (376)
T ss_dssp CSSCCCSCCEEE--TTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEE--TTEEEECCTTTEEEEEETT
T ss_pred CCCceEcCCEEE--CCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE--CCEEEEEcCCCEEEEEECC
Confidence 543322222232 44778888899999999999998754443221100 0111222 3467777777 99999999
Q ss_pred CCceEEEEEecccCCCCCcee---EEEEEEccCCEEEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEE
Q psy12614 185 KGHAIHKMSLDKSSKFSKNTA---VWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYC 261 (708)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~---v~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~ 261 (708)
+|+.+................ +.......++.+++++.++.+..+|..+|+.+..... .....+.. ++..++.
T Consensus 207 tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~w~~~~--~~~~~~~~--~~~~l~~ 282 (376)
T 3q7m_A 207 QGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKREL--GSVNDFIV--DGNRIYL 282 (376)
T ss_dssp TCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTCCEEEEECC--CCEEEEEE--ETTEEEE
T ss_pred CCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEEeeccC--CCCCCceE--ECCEEEE
Confidence 999988776431000000000 1011111256788888999999999999988766542 23444444 3568888
Q ss_pred EecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEe-ccccceEEEEEeCCEEEEEcCCCeEEEEeCCCCceeecCcc
Q psy12614 262 AGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRV-IHEGDVKSLALHGNRLYSGGLDSYLSLSYYPPKTLVKYPCT 340 (708)
Q Consensus 262 ~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~v~~l~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~ 340 (708)
++.++.+..+|..+ |+ ..| ... .....+......+..|+.++.+|.+.++|..++.+......
T Consensus 283 ~~~~g~l~~~d~~t--------G~----~~w----~~~~~~~~~~~~~~~~~~~l~v~~~~g~l~~~d~~tG~~~~~~~~ 346 (376)
T 3q7m_A 283 VDQNDRVMALTIDG--------GV----TLW----TQSDLLHRLLTSPVLYNGNLVVGDSEGYLHWINVEDGRFVAQQKV 346 (376)
T ss_dssp EETTCCEEEEETTT--------CC----EEE----EECTTTTSCCCCCEEETTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred EcCCCeEEEEECCC--------Cc----EEE----eecccCCCcccCCEEECCEEEEEeCCCeEEEEECCCCcEEEEEec
Confidence 88999999999998 75 222 222 12223344455588999999999999999988774332211
Q ss_pred -CCCCceEEEEcCCcEEEEEcCCeEEEEE
Q psy12614 341 -LAQSTPVSLAKDIQHVLLQYTSHLELWS 368 (708)
Q Consensus 341 -~~~~~~~~~s~~~~~l~~~~~~~i~i~~ 368 (708)
...........++.+++...++.+..|+
T Consensus 347 ~~~~~~~~~~~~~~~l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 347 DSSGFQTEPVAADGKLLIQAKDGTVYSIT 375 (376)
T ss_dssp CTTCBCSCCEEETTEEEEEBTTSCEEEEE
T ss_pred CCCcceeCCEEECCEEEEEeCCCEEEEEe
Confidence 1122222223466776667888888876
|
| >2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H* | Back alignment and structure |
|---|
Probab=99.50 E-value=4.9e-10 Score=111.47 Aligned_cols=274 Identities=11% Similarity=0.015 Sum_probs=183.2
Q ss_pred EEcCCCCEEEEEeC--CC---cEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEc----------CCCcEEE
Q psy12614 33 ACEPKSSRLAVSRA--DQ---SIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGG----------LQGFVNE 95 (708)
Q Consensus 33 ~~s~~~~~la~~~~--dg---~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~----------~d~~i~v 95 (708)
...|+++++.+... .+ .|.++|..+++.+. .+.... .+ .++++ +++|+++. .++.|.+
T Consensus 27 ~~~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~-~i~~g~--~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~v 101 (373)
T 2mad_H 27 APGADGRRSYINLPAHHSAIIQQWVLDAGSGSILG-HVNGGF--LP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEV 101 (373)
T ss_pred cCCCCCCEEEEeCCcccCCccEEEEEECCCCeEEE-EecCCC--CC--CeEECCCCCEEEEEeccccccccCCCCCeEEE
Confidence 45588888777653 22 78999999998776 555443 44 89999 88888875 3678999
Q ss_pred EECCCCeEeEEEeec-------CCceEEEEEecCCCEEEEEeC--CCcEEEEEccCCcEEEEEe-cccccccEEEEEECC
Q psy12614 96 YDMRRLNIKSSTAVT-------SGTCWCLSVHKKKRLLAAGTE--QGHINLFQISDEGLLYEKL-LDRQQGRILCTAWHS 165 (708)
Q Consensus 96 wd~~~~~~~~~~~~~-------~~~v~~~~~s~~~~~la~~~~--d~~i~iwd~~~~~~~~~~~-~~~~~~~v~~~~~s~ 165 (708)
||..+++.+..+... ......++|+|||++|+++.. ++.|.++| .+++.. .. +.. .+ ++.+.|
T Consensus 102 iD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~--~~~i~~-~~---~~~~~~ 174 (373)
T 2mad_H 102 FDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSD--DQLLSS-PT---CYHIHP 174 (373)
T ss_pred EECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEE--eEEcCC-Cc---eEEEEe
Confidence 999998887776532 133568999999999998874 57899999 998876 33 321 22 244556
Q ss_pred CC-CEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCC-EEEEEcCCCcEEEEeCCCCe--eEEEe
Q psy12614 166 SG-DYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADF-TIITGDSGGFVRFWDGKTGV--QWSDV 240 (708)
Q Consensus 166 d~-~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~~~~~dg~i~~wd~~~~~--~~~~~ 240 (708)
++ ..+++.+.| .+.++|. +++...........- ..........+.+++ .++..+..+.+.+.|+.++. .+..+
T Consensus 175 ~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~ 252 (373)
T 2mad_H 175 GAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLT-AAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPI 252 (373)
T ss_pred CCCceEEEEcCCCCEEEEEC-CCcEEEEEecccccc-CCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeee
Confidence 65 345566667 9999999 887764432100000 001122334566665 45555577899999987553 22222
Q ss_pred ec----------cccCeEEEEEeCCCCEEEEEec----------CCeEEEEEccCCcccccCCCCCCCCcceEEeEEEec
Q psy12614 241 KT----------HKKDILALTVSEDENYLYCAGV----------DPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVI 300 (708)
Q Consensus 241 ~~----------~~~~i~~~~~s~~~~~l~~~~~----------dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 300 (708)
.. .......++++|++++++++.. .+.|.++|..+ ++ ....+.
T Consensus 253 ~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t--------~~--------vv~~i~- 315 (373)
T 2mad_H 253 DALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLV--------GQ--------TSSQIS- 315 (373)
T ss_pred eecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCC--------CE--------EEEEEE-
Confidence 21 1223445789999998888653 35799999988 54 334443
Q ss_pred cccceEEEEEe--CC-EEEEEc-CCCeEEEEeCCCCceeec
Q psy12614 301 HEGDVKSLALH--GN-RLYSGG-LDSYLSLSYYPPKTLVKY 337 (708)
Q Consensus 301 ~~~~v~~l~~~--~~-~l~s~~-~d~~i~iw~~~~~~~~~~ 337 (708)
-.....+++++ ++ .++++. .++.|.++|..+.+....
T Consensus 316 ~g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~ 356 (373)
T 2mad_H 316 LGHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQS 356 (373)
T ss_pred CCCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEee
Confidence 23457889999 66 677776 589999999998774443
|
| >3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B | Back alignment and structure |
|---|
Probab=99.49 E-value=9.5e-11 Score=113.46 Aligned_cols=230 Identities=11% Similarity=0.025 Sum_probs=157.7
Q ss_pred eccCCCCcEEEEEEcCCCC-EEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEE
Q psy12614 21 FYAPEPKVINCIACEPKSS-RLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYD 97 (708)
Q Consensus 21 ~~~~h~~~v~~~~~s~~~~-~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd 97 (708)
++..+..---+.+|+|++. ++++...++.|..||..++... .+. .. ..+.+++++ ++ |+.+. ++.|.+||
T Consensus 7 ~~~~~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~--~~~-~~--~~~~~i~~~~dG~-l~v~~-~~~l~~~d 79 (297)
T 3g4e_A 7 VLPENCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQ--RVT-MD--APVSSVALRQSGG-YVATI-GTKFCALN 79 (297)
T ss_dssp EECCCCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEE--EEE-CS--SCEEEEEEBTTSS-EEEEE-TTEEEEEE
T ss_pred EeccCCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcEE--EEe-CC--CceEEEEECCCCC-EEEEE-CCeEEEEE
Confidence 3444555667899999654 5556667889999999987753 232 33 679999999 66 44444 57899999
Q ss_pred CCCCeEeEEEee----cCCceEEEEEecCCCEEEEEeCC---------CcEEEEEccC-CcEEEEEecccccccEEEEEE
Q psy12614 98 MRRLNIKSSTAV----TSGTCWCLSVHKKKRLLAAGTEQ---------GHINLFQISD-EGLLYEKLLDRQQGRILCTAW 163 (708)
Q Consensus 98 ~~~~~~~~~~~~----~~~~v~~~~~s~~~~~la~~~~d---------~~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~ 163 (708)
.++++....... ....+..++++|+|+++++.... ..-.+|.+.. ++.. .+.........++|
T Consensus 80 ~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~---~~~~~~~~pngi~~ 156 (297)
T 3g4e_A 80 WKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVK---KYFDQVDISNGLDW 156 (297)
T ss_dssp TTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEE---EEEEEESBEEEEEE
T ss_pred CCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEE---EEeeccccccceEE
Confidence 998875443332 12458899999999976654321 2345565543 3332 22223345688999
Q ss_pred CCCCCEEEEec-CC-eEEEEEc--CCCceEE--EEEecccCCCCCceeEEEEEEccCCEEE-EEcCCCcEEEEeCCCCee
Q psy12614 164 HSSGDYLVTGC-AA-AVRVWDI--HKGHAIH--KMSLDKSSKFSKNTAVWCVAFCADFTII-TGDSGGFVRFWDGKTGVQ 236 (708)
Q Consensus 164 s~d~~~l~~~~-~d-~i~iwd~--~~~~~~~--~~~~~~~~~~~~~~~v~~~~~~~~~~l~-~~~~dg~i~~wd~~~~~~ 236 (708)
+||++.|+.+. .+ .|.+|++ .+|.... .+.... .....+..+++.++|++. +....+.|..||..+++.
T Consensus 157 spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~----~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~ 232 (297)
T 3g4e_A 157 SLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLE----KEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKR 232 (297)
T ss_dssp CTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECC----GGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCE
T ss_pred cCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECC----CCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceE
Confidence 99999776554 44 8999987 5665421 111110 113567899999999844 445567899999988999
Q ss_pred EEEeeccccCeEEEEEe-CCCCEEEEEec
Q psy12614 237 WSDVKTHKKDILALTVS-EDENYLYCAGV 264 (708)
Q Consensus 237 ~~~~~~~~~~i~~~~~s-~~~~~l~~~~~ 264 (708)
+..+..+...+++++|. |+++.|++++.
T Consensus 233 ~~~i~~p~~~~t~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 233 LQTVKLPVDKTTSCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp EEEEECSSSBEEEEEEESGGGCEEEEEEB
T ss_pred EEEEECCCCCceEEEEeCCCCCEEEEEcC
Confidence 98888777889999998 88888877664
|
| >3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus} | Back alignment and structure |
|---|
Probab=99.46 E-value=2.8e-11 Score=120.67 Aligned_cols=275 Identities=11% Similarity=-0.031 Sum_probs=182.3
Q ss_pred CCEEEEEcC-C----CcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEe----------CCCcEEEEEccCCcE
Q psy12614 81 NDRLFSGGL-Q----GFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGT----------EQGHINLFQISDEGL 145 (708)
Q Consensus 81 ~~~l~s~~~-d----~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~----------~d~~i~iwd~~~~~~ 145 (708)
++++++... + +.|.+.|..+++.+..+..-..+ .++++|||++|+++. .++.|.++|..+++.
T Consensus 84 ~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~v 161 (426)
T 3c75_H 84 ARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLP 161 (426)
T ss_dssp TTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCE
T ss_pred CCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcE
Confidence 555655544 2 69999999999999998865555 899999999988875 367899999999988
Q ss_pred EEEEecccc-----cccEEEEEECCCCCEEEEecC--C-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCC--
Q psy12614 146 LYEKLLDRQ-----QGRILCTAWHSSGDYLVTGCA--A-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADF-- 215 (708)
Q Consensus 146 ~~~~~~~~~-----~~~v~~~~~s~d~~~l~~~~~--d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-- 215 (708)
+....+.+. ......+.|+|||++|+++.. + .|.+.|+.+++.+.++..+ .. ....|++
T Consensus 162 v~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~-------g~----~~~~p~g~~ 230 (426)
T 3c75_H 162 IADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVP-------DC----YHIFPASPT 230 (426)
T ss_dssp EEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECC-------SE----EEEEEEETT
T ss_pred EEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcC-------Cc----eeeccCCCc
Confidence 743333200 123457899999999998763 4 8999999999999988764 11 2334444
Q ss_pred EEEEEcCCCcEEEEeCCCCeeEEE----eeccccCe-EEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCc
Q psy12614 216 TIITGDSGGFVRFWDGKTGVQWSD----VKTHKKDI-LALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSS 290 (708)
Q Consensus 216 ~l~~~~~dg~i~~wd~~~~~~~~~----~~~~~~~i-~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~ 290 (708)
.+++.+.||.+.+.+..+++.... +.....++ ..+.|.+++..++.....+.+.+.|... +.
T Consensus 231 ~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~--------~~----- 297 (426)
T 3c75_H 231 VFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTA--------EG----- 297 (426)
T ss_dssp EEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECS--------SC-----
T ss_pred EEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccC--------Cc-----
Confidence 366777788888888866655432 11111111 2356788888887777888888888865 32
Q ss_pred ceEEeEEEeccccceEEEEEeCCEEEEEcCCCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEEEc----------
Q psy12614 291 VWVRSVNRVIHEGDVKSLALHGNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQY---------- 360 (708)
Q Consensus 291 ~~~~~~~~~~~~~~v~~l~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~---------- 360 (708)
.... .-|.+.................++++|+++.+.+..
T Consensus 298 ----~~v~--------------------------~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~ 347 (426)
T 3c75_H 298 ----ATFR--------------------------APIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKA 347 (426)
T ss_dssp ----EEEC--------------------------CCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTS
T ss_pred ----eEEe--------------------------eeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccC
Confidence 0000 001111000000000011223478899988766642
Q ss_pred -CCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCc-EEEEEc--CCceEEEEEEe
Q psy12614 361 -TSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGK-YVAYST--ESCVRLHSLDL 433 (708)
Q Consensus 361 -~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~-~l~~~~--d~~i~i~~~~~ 433 (708)
++.|.++|..+.+ .+.++..+ .....++|+|||+ ++++.. ++.|.++|+.+
T Consensus 348 ~s~~VsVID~~T~k--------------------vv~~I~vg--~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t 402 (426)
T 3c75_H 348 ASRFVVVLNAETGE--------------------RINKIELG--HEIDSINVSQDAEPLLYALSAGTQTLHIYDAAT 402 (426)
T ss_dssp CEEEEEEEETTTCC--------------------EEEEEEEE--EEECEEEECCSSSCEEEEEETTTTEEEEEETTT
T ss_pred CCCEEEEEECCCCe--------------------EEEEEECC--CCcCeEEEccCCCEEEEEEcCCCCeEEEEECCC
Confidence 3479999998866 44444332 2578899999999 777744 89999999886
|
| >1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum} | Back alignment and structure |
|---|
Probab=99.46 E-value=1.6e-11 Score=135.35 Aligned_cols=275 Identities=9% Similarity=-0.044 Sum_probs=173.7
Q ss_pred cCCCCEEEEEeCCCc---EEEEeCC-----CCCeEEEEEe------cCCCCCcEEEEEEe--CCEEEEEcCC-----CcE
Q psy12614 35 EPKSSRLAVSRADQS---IEIWDIS-----ETPHVDRVFI------GDPLSNSIECLTWF--NDRLFSGGLQ-----GFV 93 (708)
Q Consensus 35 s~~~~~la~~~~dg~---v~iwd~~-----~~~~~~~~~~------~h~~~~~v~~l~~~--~~~l~s~~~d-----~~i 93 (708)
+|+|++++....++. -.||-.. .+.. ...+. +|. ..+..++|| |++|+.+..+ .+|
T Consensus 115 ~pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~lld~~~l~~~~~--~~~~~~~~SPDG~~la~~~~~~G~e~~~i 191 (741)
T 1yr2_A 115 QRRGASVFYSWNSGLMNQSQLLVRPADAPVGTKG-RVLLDPNTWAKDGA--TALDAWAASDDGRLLAYSVQDGGSDWRTV 191 (741)
T ss_dssp EEETTEEEEEEECSSCSSCEEEEEETTSCTTCCC-EEEECGGGCC------EEEEEEEECTTSSEEEEEEEETTCSEEEE
T ss_pred EEECCEEEEEEEcCCCeEEEEEEEcCCccCCCCC-EEEECHHHhccCCC--EEEEeEEECCCCCEEEEEEcCCCCceEEE
Confidence 489999987754433 5555543 3332 22322 222 368899999 8888876543 469
Q ss_pred EEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCc--------------EEEEEccCCcE--EEEEeccccccc
Q psy12614 94 NEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGH--------------INLFQISDEGL--LYEKLLDRQQGR 157 (708)
Q Consensus 94 ~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~--------------i~iwd~~~~~~--~~~~~~~~~~~~ 157 (708)
++||+.+++.+.. ..+...+..++|+|| +.|+.++.++. |++|++.++.. ........+...
T Consensus 192 ~v~dl~tg~~~~~-~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~ 269 (741)
T 1yr2_A 192 KFVGVADGKPLAD-ELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKR 269 (741)
T ss_dssp EEEETTTCCEEEE-EEEEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTC
T ss_pred EEEECCCCCCCCc-cCCCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeE
Confidence 9999999987653 222223457899999 99988876554 89999987652 111223334446
Q ss_pred EEEEEECCCCCEEEEecC-----C-eEEEEEcCCC--ceEEEEEecccCCCCCceeEEEEEEccCC-EEEEEcC----CC
Q psy12614 158 ILCTAWHSSGDYLVTGCA-----A-AVRVWDIHKG--HAIHKMSLDKSSKFSKNTAVWCVAFCADF-TIITGDS----GG 224 (708)
Q Consensus 158 v~~~~~s~d~~~l~~~~~-----d-~i~iwd~~~~--~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~~~~~----dg 224 (708)
+..+.|||||++|+..+. . .|.+||+.++ +....+... ........ +|+| .++..+. ++
T Consensus 270 ~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~-------~~~~~~~~-~~dg~~l~~~s~~~~~~~ 341 (741)
T 1yr2_A 270 GHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPD-------LKAQWDFV-DGVGDQLWFVSGDGAPLK 341 (741)
T ss_dssp EEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECS-------SSSCEEEE-EEETTEEEEEECTTCTTC
T ss_pred EEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCC-------CCceEEEE-eccCCEEEEEECCCCCCC
Confidence 889999999999887652 4 7999999887 314444433 22233333 3777 4655544 35
Q ss_pred cEEEEeCCCC--eeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEec-c
Q psy12614 225 FVRFWDGKTG--VQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVI-H 301 (708)
Q Consensus 225 ~i~~wd~~~~--~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~ 301 (708)
.|.+||+.++ .....+..+...+..++++ ++.++++...|+..++|.+.. .|+ ....+.. +
T Consensus 342 ~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~-------~g~--------~~~~l~~~~ 405 (741)
T 1yr2_A 342 KIVRVDLSGSTPRFDTVVPESKDNLESVGIA-GNRLFASYIHDAKSQVLAFDL-------DGK--------PAGAVSLPG 405 (741)
T ss_dssp EEEEEECSSSSCEEEEEECCCSSEEEEEEEE-BTEEEEEEEETTEEEEEEEET-------TSC--------EEEECBCSS
T ss_pred EEEEEeCCCCccccEEEecCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeC-------CCC--------ceeeccCCC
Confidence 6999999874 3344445455556677887 566778888898877776652 022 2333443 3
Q ss_pred ccceEEEEEe--CCEEE-EE---cCCCeEEEEeCCCCceeecC
Q psy12614 302 EGDVKSLALH--GNRLY-SG---GLDSYLSLSYYPPKTLVKYP 338 (708)
Q Consensus 302 ~~~v~~l~~~--~~~l~-s~---~~d~~i~iw~~~~~~~~~~~ 338 (708)
.+.+..++++ ++.++ +. ...+.+.+||+.++....+.
T Consensus 406 ~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~~~l~ 448 (741)
T 1yr2_A 406 IGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAKTTPWE 448 (741)
T ss_dssp SCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTEEEECS
T ss_pred CeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcEEEEe
Confidence 5667778776 44444 32 23578999999877644443
|
| >3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
Probab=99.46 E-value=3.6e-11 Score=121.59 Aligned_cols=239 Identities=13% Similarity=0.066 Sum_probs=162.0
Q ss_pred CcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCC--cEEEEECCCCe
Q psy12614 27 KVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQG--FVNEYDMRRLN 102 (708)
Q Consensus 27 ~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~--~i~vwd~~~~~ 102 (708)
.....++|+|+++++++...++.|++||..++.... ..... .... ++|+ ++.|+++..++ .|.+|+..++.
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~-~~~~~---~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~ 205 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTT-VHPGF---KGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGW 205 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEE-EEETC---CBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTT
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEE-eeccC---CCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCc
Confidence 468899999999987877778899999999877654 44442 2333 8888 78888888766 79999987765
Q ss_pred EeEEE----eecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEe--cccccccE-E-EEEECCCCCEE-EEe
Q psy12614 103 IKSST----AVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKL--LDRQQGRI-L-CTAWHSSGDYL-VTG 173 (708)
Q Consensus 103 ~~~~~----~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~--~~~~~~~v-~-~~~~s~d~~~l-~~~ 173 (708)
....+ ......+.+++++|++..|.++..++.|+.||..++....... ..+....- . .++|+|++..| ++-
T Consensus 206 ~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d 285 (409)
T 3hrp_A 206 APTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSD 285 (409)
T ss_dssp CEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEE
T ss_pred eeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEe
Confidence 44444 2245678899999965556667778899999998876542111 22222222 3 89999964445 444
Q ss_pred cCC-eEEEEEcCCCceEEEEEecc-c-CC------CCCceeEEEEEEccCCEE-EEEc-CCCcEEEEeCCCCeeEEEeec
Q psy12614 174 CAA-AVRVWDIHKGHAIHKMSLDK-S-SK------FSKNTAVWCVAFCADFTI-ITGD-SGGFVRFWDGKTGVQWSDVKT 242 (708)
Q Consensus 174 ~~d-~i~iwd~~~~~~~~~~~~~~-~-~~------~~~~~~v~~~~~~~~~~l-~~~~-~dg~i~~wd~~~~~~~~~~~~ 242 (708)
..+ .|+.|+... . +..+.... . +. ...-.....++++++|++ ++-. .++.|+.|++.+++. .++.+
T Consensus 286 ~~~~~I~~~~~~g-~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v-~~~~g 362 (409)
T 3hrp_A 286 QNLSSVYKITPDG-E-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYV-STVAG 362 (409)
T ss_dssp TTTTEEEEECTTC-C-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEE-EEEEE
T ss_pred CCCCEEEEEecCC-C-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEE-EEEeC
Confidence 555 999999754 3 22222110 0 00 000234789999999974 4555 678999999877764 33333
Q ss_pred c---------------ccCeEEEEEeCCCCEEEEEecCCeEEEEEc
Q psy12614 243 H---------------KKDILALTVSEDENYLYCAGVDPTVVCFQR 273 (708)
Q Consensus 243 ~---------------~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~ 273 (708)
+ -.....++++++++++++-..++.|+.+++
T Consensus 363 ~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 363 QVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp CTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred CCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 3 245789999999877777777788888765
|
| >2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1 | Back alignment and structure |
|---|
Probab=99.45 E-value=1.4e-10 Score=113.87 Aligned_cols=228 Identities=10% Similarity=-0.036 Sum_probs=151.9
Q ss_pred ccCCCCcEEEEEEcCCCC-EEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe-CCEEEEEcCCCcEEEEECC
Q psy12614 22 YAPEPKVINCIACEPKSS-RLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF-NDRLFSGGLQGFVNEYDMR 99 (708)
Q Consensus 22 ~~~h~~~v~~~~~s~~~~-~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~-~~~l~s~~~d~~i~vwd~~ 99 (708)
+........+.+|+|++. ++++...++.|.+||..+++.. .+. .. ..+.+++|+ ...++.++.+ .|.+||..
T Consensus 44 ~~~~~~~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~--~~~-~~--~~v~~i~~~~dg~l~v~~~~-gl~~~d~~ 117 (326)
T 2ghs_A 44 DETPMLLGEGPTFDPASGTAWWFNILERELHELHLASGRKT--VHA-LP--FMGSALAKISDSKQLIASDD-GLFLRDTA 117 (326)
T ss_dssp ECSCCSBEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEE--EEE-CS--SCEEEEEEEETTEEEEEETT-EEEEEETT
T ss_pred eccCCCCCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEE--EEE-CC--CcceEEEEeCCCeEEEEECC-CEEEEECC
Confidence 333334567889999855 4556666789999999887653 232 34 679999999 4444444444 49999998
Q ss_pred CCeEeEEEee----cCCceEEEEEecCCCEEEEEeC------CCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCE
Q psy12614 100 RLNIKSSTAV----TSGTCWCLSVHKKKRLLAAGTE------QGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDY 169 (708)
Q Consensus 100 ~~~~~~~~~~----~~~~v~~~~~s~~~~~la~~~~------d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~ 169 (708)
+++....... ....+..++++|+|+++++... .+.|..++ +++.. .+.........++|+||++.
T Consensus 118 ~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~---~~~~~~~~~~~i~~s~dg~~ 192 (326)
T 2ghs_A 118 TGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVT---KLFADISIPNSICFSPDGTT 192 (326)
T ss_dssp TCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEE---EEEEEESSEEEEEECTTSCE
T ss_pred CCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEE---EeeCCCcccCCeEEcCCCCE
Confidence 8875433221 1236889999999997665432 24455555 55543 22223345678999999997
Q ss_pred EEEec-CC-eEEEEEcC--CC-ceE--EEEEecccCCCCCceeEEEEEEccCCEEEEE-cCCCcEEEEeCCCCeeEEEee
Q psy12614 170 LVTGC-AA-AVRVWDIH--KG-HAI--HKMSLDKSSKFSKNTAVWCVAFCADFTIITG-DSGGFVRFWDGKTGVQWSDVK 241 (708)
Q Consensus 170 l~~~~-~d-~i~iwd~~--~~-~~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~-~~dg~i~~wd~~~~~~~~~~~ 241 (708)
|+.+. .+ .|.+|++. ++ ... ..+.... .....+..+++.++|.+.++ ..++.|..||. +++.+..+.
T Consensus 193 lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~----~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~ 267 (326)
T 2ghs_A 193 GYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDST----GIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYE 267 (326)
T ss_dssp EEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECT----TSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEE
T ss_pred EEEEECCCCEEEEEEcccccCCcccCceEEEECC----CCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEEE
Confidence 76554 45 89999986 56 321 1221110 11355678999999975444 45678999998 677777777
Q ss_pred ccccCeEEEEEe-CCCCEEEEEecC
Q psy12614 242 THKKDILALTVS-EDENYLYCAGVD 265 (708)
Q Consensus 242 ~~~~~i~~~~~s-~~~~~l~~~~~d 265 (708)
.+...+.+++|+ ++++.|++++..
T Consensus 268 ~~~~~~~~~af~g~d~~~L~vt~~~ 292 (326)
T 2ghs_A 268 VPGKQTTCPAFIGPDASRLLVTSAR 292 (326)
T ss_dssp CSCSBEEEEEEESTTSCEEEEEEBC
T ss_pred CCCCCcEEEEEecCCCCEEEEEecC
Confidence 676789999998 888877666544
|
| >3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A | Back alignment and structure |
|---|
Probab=99.44 E-value=6.2e-10 Score=112.08 Aligned_cols=300 Identities=13% Similarity=0.119 Sum_probs=188.5
Q ss_pred eCCEEEEEcCCCcEEEEECCCCeEeEEEeecC---------CceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEe
Q psy12614 80 FNDRLFSGGLQGFVNEYDMRRLNIKSSTAVTS---------GTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKL 150 (708)
Q Consensus 80 ~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~---------~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~ 150 (708)
.++.+++++.++.|..+|.++|+.+....... ..+.+. ...++..+++++.++.|..+|..+++......
T Consensus 52 ~~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~ 130 (376)
T 3q7m_A 52 ADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGG-VTVSGGHVYIGSEKAQVYALNTSDGTVAWQTK 130 (376)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEE-EEEETTEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred ECCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccC-ceEeCCEEEEEcCCCEEEEEECCCCCEEEEEe
Confidence 48889999999999999999999887766421 223222 22245678888899999999999999876554
Q ss_pred cccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEEEEcCCCcEEEE
Q psy12614 151 LDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFW 229 (708)
Q Consensus 151 ~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~w 229 (708)
+..... ...... +..++.++.+ .|..+|..+|+.+.......... . ......... .++.++++..++.|..+
T Consensus 131 ~~~~~~--~~p~~~--~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~-~-~~~~~~~~~-~~~~v~~g~~~g~l~~~ 203 (376)
T 3q7m_A 131 VAGEAL--SRPVVS--DGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSL-S-LRGESAPTT-AFGAAVVGGDNGRVSAV 203 (376)
T ss_dssp CSSCCC--SCCEEE--TTEEEEECTTSEEEEEETTTCCEEEEEECCC-------CCCCCCEE-ETTEEEECCTTTEEEEE
T ss_pred CCCceE--cCCEEE--CCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCce-e-ecCCCCcEE-ECCEEEEEcCCCEEEEE
Confidence 432211 111121 4467777777 99999999999988876531000 0 000011112 26678888889999999
Q ss_pred eCCCCeeEEEeeccccC----------e-EEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEE
Q psy12614 230 DGKTGVQWSDVKTHKKD----------I-LALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNR 298 (708)
Q Consensus 230 d~~~~~~~~~~~~~~~~----------i-~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~ 298 (708)
|..+|+.+......... + ..... .+..++.++.++.+..+|..+ |+ ..|. .
T Consensus 204 d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~--~~~~v~~~~~~g~l~~~d~~t--------G~----~~w~----~ 265 (376)
T 3q7m_A 204 LMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVV--VNGVVFALAYNGNLTALDLRS--------GQ----IMWK----R 265 (376)
T ss_dssp ETTTCCEEEEEECCC-----------CCCCCCEE--ETTEEEEECTTSCEEEEETTT--------CC----EEEE----E
T ss_pred ECCCCcEEEEEecccCCCCcccccccccCCCcEE--ECCEEEEEecCcEEEEEECCC--------Cc----EEee----c
Confidence 99999887665432110 1 11111 245788888899999999988 65 2222 1
Q ss_pred eccccceEEEEEeCCEEEEEcCCCeEEEEeCCCCceeecCccC--CCCceEEEEcCCcEEEEEcCCeEEEEEecCCCCCC
Q psy12614 299 VIHEGDVKSLALHGNRLYSGGLDSYLSLSYYPPKTLVKYPCTL--AQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQSTD 376 (708)
Q Consensus 299 ~~~~~~v~~l~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~--~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~~~ 376 (708)
.......+...++.++.++.++.+..+|..++......... .......+ .++.+++...++.+..+|..+++
T Consensus 266 --~~~~~~~~~~~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~-~~~~l~v~~~~g~l~~~d~~tG~--- 339 (376)
T 3q7m_A 266 --ELGSVNDFIVDGNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVL-YNGNLVVGDSEGYLHWINVEDGR--- 339 (376)
T ss_dssp --CCCCEEEEEEETTEEEEEETTCCEEEEETTTCCEEEEECTTTTSCCCCCEE-ETTEEEEECTTSEEEEEETTTCC---
T ss_pred --cCCCCCCceEECCEEEEEcCCCeEEEEECCCCcEEEeecccCCCcccCCEE-ECCEEEEEeCCCeEEEEECCCCc---
Confidence 12334556666888999999999999999887743322111 11222222 34555556678899999998877
Q ss_pred CCCCCCCCcccCCCCceEEEEEEecCCCceEE-EEeCCCCcEEEEEcCCceEEEE
Q psy12614 377 LSSHSNTTGVPLLSFPRLIVKMSAVNNATIRC-SVVSNDGKYVAYSTESCVRLHS 430 (708)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~s~~g~~l~~~~d~~i~i~~ 430 (708)
.+....... ..+.+ ... .++.+++.+.+|.+..|+
T Consensus 340 -----------------~~~~~~~~~-~~~~~~~~~-~~~~l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 340 -----------------FVAQQKVDS-SGFQTEPVA-ADGKLLIQAKDGTVYSIT 375 (376)
T ss_dssp -----------------EEEEEECCT-TCBCSCCEE-ETTEEEEEBTTSCEEEEE
T ss_pred -----------------EEEEEecCC-CcceeCCEE-ECCEEEEEeCCCEEEEEe
Confidence 344443212 22221 222 255544445688888876
|
| >1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C* | Back alignment and structure |
|---|
Probab=99.44 E-value=5.9e-12 Score=123.63 Aligned_cols=178 Identities=7% Similarity=0.062 Sum_probs=136.7
Q ss_pred CcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCC---------eEEEEEecCCCCCcEEEEEEeCCEEEEEcCCCcEEEEE
Q psy12614 27 KVINCIACEPKSSRLAVSRADQSIEIWDISETP---------HVDRVFIGDPLSNSIECLTWFNDRLFSGGLQGFVNEYD 97 (708)
Q Consensus 27 ~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~---------~~~~~~~~h~~~~~v~~l~~~~~~l~s~~~d~~i~vwd 97 (708)
..++.+++++...++++|+.+ .+++|++.... ........+. . |+.|+|.++.|+++ .++.|++||
T Consensus 38 ~~~nlLais~~~gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp--~-V~~l~fd~~~L~v~-~~~~l~v~d 112 (388)
T 1xip_A 38 ASLQNLDISNSKSLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEKEIP--D-VIFVCFHGDQVLVS-TRNALYSLD 112 (388)
T ss_dssp SCCBCEEEETTTTEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEEECT--T-EEEEEEETTEEEEE-ESSEEEEEE
T ss_pred ccccEEEEcCCCCEEEEeCCC-EEEEEEhhHhhhhhccccccccceEEeeCC--C-eeEEEECCCEEEEE-cCCcEEEEE
Confidence 369999999999999999988 56679876432 1111233455 6 99999988889888 889999999
Q ss_pred CCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-
Q psy12614 98 MRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA- 176 (708)
Q Consensus 98 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d- 176 (708)
+.+.........|...+.++.+.+.. +|+++.||.|.+||+.++... . +...|.+++|||+| ++.+..|
T Consensus 113 v~sl~~~~~~~~~~~~v~~i~~~~p~--~av~~~dG~L~v~dl~~~~~~--~----~~~~Vs~v~WSpkG--~~vg~~dg 182 (388)
T 1xip_A 113 LEELSEFRTVTSFEKPVFQLKNVNNT--LVILNSVNDLSALDLRTKSTK--Q----LAQNVTSFDVTNSQ--LAVLLKDR 182 (388)
T ss_dssp SSSTTCEEEEEECSSCEEEEEECSSE--EEEEETTSEEEEEETTTCCEE--E----EEESEEEEEECSSE--EEEEETTS
T ss_pred chhhhccCccceeecceeeEEecCCC--EEEEECCCCEEEEEccCCccc--c----ccCCceEEEEcCCc--eEEEEcCC
Confidence 98877666777888889888877653 888999999999999988764 2 34689999999999 6778888
Q ss_pred eEEEEEcCCCce--EEEEEecc--cCCCCCceeEEEEEEccCCEEEE
Q psy12614 177 AVRVWDIHKGHA--IHKMSLDK--SSKFSKNTAVWCVAFCADFTIIT 219 (708)
Q Consensus 177 ~i~iwd~~~~~~--~~~~~~~~--~~~~~~~~~v~~~~~~~~~~l~~ 219 (708)
.+++|+...++. ...+..+. ..+..+...|.++.|.+++++++
T Consensus 183 ~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv 229 (388)
T 1xip_A 183 SFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLA 229 (388)
T ss_dssp CEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEE
T ss_pred cEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEE
Confidence 999999887775 55553221 00002378899999999997443
|
| >3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.43 E-value=4.6e-11 Score=116.26 Aligned_cols=230 Identities=9% Similarity=-0.021 Sum_probs=156.9
Q ss_pred eeccCCCCcEEEEEEcCCCC-EEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEE
Q psy12614 20 KFYAPEPKVINCIACEPKSS-RLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEY 96 (708)
Q Consensus 20 ~~~~~h~~~v~~~~~s~~~~-~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vw 96 (708)
+.+..........+|+|+|+ +++++..++.|..|+. ++.. . .+..+. ..+..++++ |+.+++...++.|.+|
T Consensus 38 ~~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~~-~-~~~~~~--~~~~gl~~d~dG~l~v~~~~~~~v~~~ 112 (305)
T 3dr2_A 38 LTLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGTV-D-VLLDAT--AFTNGNAVDAQQRLVHCEHGRRAITRS 112 (305)
T ss_dssp EEEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSCE-E-EEEESC--SCEEEEEECTTSCEEEEETTTTEEEEE
T ss_pred EEEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCCE-E-EEeCCC--CccceeeECCCCCEEEEECCCCEEEEE
Confidence 33444556678899999998 5666777889999998 4543 2 455555 779999999 6655555566889999
Q ss_pred ECCCCeEeEEEeec----CCceEEEEEecCCCEEEE----EeC-------------CCcEEEEEccCCcEEEEEeccccc
Q psy12614 97 DMRRLNIKSSTAVT----SGTCWCLSVHKKKRLLAA----GTE-------------QGHINLFQISDEGLLYEKLLDRQQ 155 (708)
Q Consensus 97 d~~~~~~~~~~~~~----~~~v~~~~~s~~~~~la~----~~~-------------d~~i~iwd~~~~~~~~~~~~~~~~ 155 (708)
+.+ ++........ ...+..++++|+|++.++ |.. .+.|..||..+++... .. ..
T Consensus 113 ~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~--~~--~~ 187 (305)
T 3dr2_A 113 DAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQR--MA--DL 187 (305)
T ss_dssp CTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEE--EE--EE
T ss_pred CCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEE--Ee--cC
Confidence 986 5533222211 234678999999998876 321 2567778876777642 11 33
Q ss_pred ccEEEEEECCCCCEEEEecC------C-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEEEEcCCCcEEE
Q psy12614 156 GRILCTAWHSSGDYLVTGCA------A-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRF 228 (708)
Q Consensus 156 ~~v~~~~~s~d~~~l~~~~~------d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~ 228 (708)
.....++|+||++.|+.+.. . .|.+|++..+. +........ ........+++.++|++.+++.+ .|.+
T Consensus 188 ~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~-l~~~~~~~~---~~~~~pdgi~~d~~G~lwv~~~~-gv~~ 262 (305)
T 3dr2_A 188 DHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGA-LHDRRHFAS---VPDGLPDGFCVDRGGWLWSSSGT-GVCV 262 (305)
T ss_dssp SSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTE-EEEEEEEEC---CSSSCCCSEEECTTSCEEECCSS-EEEE
T ss_pred CCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCC-ccCCeEEEE---CCCCCCCeEEECCCCCEEEecCC-cEEE
Confidence 45678999999997776543 3 79999987654 221111100 01233456889999987777655 4999
Q ss_pred EeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEecCC
Q psy12614 229 WDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDP 266 (708)
Q Consensus 229 wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg 266 (708)
|+. +++.+..+..+. .+.+++|+++++.|+.++.++
T Consensus 263 ~~~-~g~~~~~~~~~~-~~~~~~f~~d~~~L~it~~~~ 298 (305)
T 3dr2_A 263 FDS-DGQLLGHIPTPG-TASNCTFDQAQQRLFITGGPC 298 (305)
T ss_dssp ECT-TSCEEEEEECSS-CCCEEEECTTSCEEEEEETTE
T ss_pred ECC-CCCEEEEEECCC-ceeEEEEeCCCCEEEEEcCCe
Confidence 997 577777776554 588999999999998888754
|
| >1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ... | Back alignment and structure |
|---|
Probab=99.42 E-value=3.4e-10 Score=110.85 Aligned_cols=232 Identities=12% Similarity=0.062 Sum_probs=158.9
Q ss_pred CcEEEEEEe--CCEEEE-------EcCCCcEEEEECCCCeEeEEEe----ecCCceEEEEEecC-CCEEEEEeCCCcEEE
Q psy12614 72 NSIECLTWF--NDRLFS-------GGLQGFVNEYDMRRLNIKSSTA----VTSGTCWCLSVHKK-KRLLAAGTEQGHINL 137 (708)
Q Consensus 72 ~~v~~l~~~--~~~l~s-------~~~d~~i~vwd~~~~~~~~~~~----~~~~~v~~~~~s~~-~~~la~~~~d~~i~i 137 (708)
....+++|+ +..+++ ...++.|.+||..+++...... ++...+.+++++++ ++++++ +..+.|.+
T Consensus 18 ~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~-~~~~~l~~ 96 (314)
T 1pjx_A 18 PGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVA-DMRLGLLV 96 (314)
T ss_dssp TTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEE-ETTTEEEE
T ss_pred CCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEE-ECCCCEEE
Confidence 567899998 655556 4678999999988877543222 14467899999999 665554 44457999
Q ss_pred EEccCCcEEEEEe-cc---c-ccccEEEEEECCCCCEEEEecCC----------------eEEEEEcCCCceEEEEEecc
Q psy12614 138 FQISDEGLLYEKL-LD---R-QQGRILCTAWHSSGDYLVTGCAA----------------AVRVWDIHKGHAIHKMSLDK 196 (708)
Q Consensus 138 wd~~~~~~~~~~~-~~---~-~~~~v~~~~~s~d~~~l~~~~~d----------------~i~iwd~~~~~~~~~~~~~~ 196 (708)
||.+ ++.. .. .. . ....+.+++++++|+.+++...+ .|..||.. ++...... .
T Consensus 97 ~d~~-g~~~--~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~-~- 170 (314)
T 1pjx_A 97 VQTD-GTFE--EIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDT-A- 170 (314)
T ss_dssp EETT-SCEE--ECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEE-E-
T ss_pred EeCC-CCEE--EEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEecc-C-
Confidence 9998 7664 22 11 1 12457899999999887776542 56666655 54433222 1
Q ss_pred cCCCCCceeEEEEEEc----cCCE-EE-EEcCCCcEEEEeCC-CCee-----EEEeeccc-cCeEEEEEeCCCCEEEEEe
Q psy12614 197 SSKFSKNTAVWCVAFC----ADFT-II-TGDSGGFVRFWDGK-TGVQ-----WSDVKTHK-KDILALTVSEDENYLYCAG 263 (708)
Q Consensus 197 ~~~~~~~~~v~~~~~~----~~~~-l~-~~~~dg~i~~wd~~-~~~~-----~~~~~~~~-~~i~~~~~s~~~~~l~~~~ 263 (708)
......++++ |+++ ++ +...++.|.+||.. +++. ...+..+. ..+..++++++|+++++..
T Consensus 171 ------~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~ 244 (314)
T 1pjx_A 171 ------FQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANW 244 (314)
T ss_dssp ------ESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEE
T ss_pred ------CCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEc
Confidence 3346788999 9994 44 44567899999976 4542 22333333 5678899999998888877
Q ss_pred cCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CC-EEEEEcCCCeEEEEeCCCC
Q psy12614 264 VDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GN-RLYSGGLDSYLSLSYYPPK 332 (708)
Q Consensus 264 ~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~-~l~s~~~d~~i~iw~~~~~ 332 (708)
.++.|.+|+..+ ++ ....+..+...+.+++++ ++ ++++...++.|..|++...
T Consensus 245 ~~~~i~~~d~~~--------g~--------~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~~ 300 (314)
T 1pjx_A 245 GSSHIEVFGPDG--------GQ--------PKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQRN 300 (314)
T ss_dssp TTTEEEEECTTC--------BS--------CSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSSC
T ss_pred CCCEEEEEcCCC--------Cc--------EeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCCC
Confidence 788999999885 43 223344555778999997 66 4455566789999988653
|
| >3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
Probab=99.42 E-value=2.5e-10 Score=115.32 Aligned_cols=233 Identities=10% Similarity=-0.024 Sum_probs=159.7
Q ss_pred CceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC---eEEEEEcCCCce
Q psy12614 112 GTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA---AVRVWDIHKGHA 188 (708)
Q Consensus 112 ~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d---~i~iwd~~~~~~ 188 (708)
.....|+|+++++++++...++.|++||..++.+.. .... ..... ++|+|+++.|+++..+ .|.+++...+..
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~--~~~~-~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~ 206 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTT--VHPG-FKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWA 206 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEE--EEET-CCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTC
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEE--eecc-CCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCce
Confidence 467899999999977777777999999999887752 2222 22233 9999999988887763 688898877665
Q ss_pred EEEEEecccCCCCCceeEEEEEEcc-CCEEEEEcCCCcEEEEeCCCCeeEEE----eeccccCe-E-EEEEeCC-CCEEE
Q psy12614 189 IHKMSLDKSSKFSKNTAVWCVAFCA-DFTIITGDSGGFVRFWDGKTGVQWSD----VKTHKKDI-L-ALTVSED-ENYLY 260 (708)
Q Consensus 189 ~~~~~~~~~~~~~~~~~v~~~~~~~-~~~l~~~~~dg~i~~wd~~~~~~~~~----~~~~~~~i-~-~~~~s~~-~~~l~ 260 (708)
...+..... .....+.+++++| ++.++++..++.|+.||..++..... ..++...- . .++|+|+ +.+++
T Consensus 207 ~~~~g~~~~---~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv 283 (409)
T 3hrp_A 207 PTRIGQLGS---TFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYM 283 (409)
T ss_dssp EEEEEECCT---TSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEE
T ss_pred eEEeeeccc---hhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEE
Confidence 444411110 0145578899999 67877788889999999987754322 22222222 2 8999996 54445
Q ss_pred EEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEecc---------------ccceEEEEEe--CCEEEEEc-CCC
Q psy12614 261 CAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIH---------------EGDVKSLALH--GNRLYSGG-LDS 322 (708)
Q Consensus 261 ~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~---------------~~~v~~l~~~--~~~l~s~~-~d~ 322 (708)
+-..++.|+.|+... . ...+.++ -.....++++ ++++++-. .++
T Consensus 284 ~d~~~~~I~~~~~~g--------~----------~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~ 345 (409)
T 3hrp_A 284 SDQNLSSVYKITPDG--------E----------CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGY 345 (409)
T ss_dssp EETTTTEEEEECTTC--------C----------EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTC
T ss_pred EeCCCCEEEEEecCC--------C----------EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCC
Confidence 555678899998765 1 1222222 1347788998 77777777 889
Q ss_pred eEEEEeCCCCceeecCcc---------------CCCCceEEEEcCCcEEEEE-cCCeEEEEEe
Q psy12614 323 YLSLSYYPPKTLVKYPCT---------------LAQSTPVSLAKDIQHVLLQ-YTSHLELWSL 369 (708)
Q Consensus 323 ~i~iw~~~~~~~~~~~~~---------------~~~~~~~~~s~~~~~l~~~-~~~~i~i~~~ 369 (708)
.|+.|++.++.+..+.+. +..+..++++++|.++++. .++.|+.+++
T Consensus 346 ~I~~~~~~~G~v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 346 CLRKLDILDGYVSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp EEEEEETTTTEEEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred EEEEEECCCCEEEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 999999777665544322 3456779999998888775 6677877665
|
| >3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B | Back alignment and structure |
|---|
Probab=99.41 E-value=1.1e-09 Score=105.82 Aligned_cols=213 Identities=11% Similarity=0.097 Sum_probs=147.8
Q ss_pred CcEEEEEEe---CCEEEEEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEE
Q psy12614 72 NSIECLTWF---NDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYE 148 (708)
Q Consensus 72 ~~v~~l~~~---~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~ 148 (708)
.-..+..|+ +..+++...++.|..||..+++.. .+ .....+.+++++++|+++++ . ++.|.+||.++++....
T Consensus 13 ~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~-~~~~~~~~i~~~~dG~l~v~-~-~~~l~~~d~~~g~~~~~ 88 (297)
T 3g4e_A 13 RCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQ-RV-TMDAPVSSVALRQSGGYVAT-I-GTKFCALNWKEQSAVVL 88 (297)
T ss_dssp SBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEE-EE-ECSSCEEEEEEBTTSSEEEE-E-TTEEEEEETTTTEEEEE
T ss_pred ccccCCeEECCCCEEEEEECCCCEEEEEECCCCcEE-EE-eCCCceEEEEECCCCCEEEE-E-CCeEEEEECCCCcEEEE
Confidence 567788998 445566667899999999987652 22 34578999999999995554 4 56799999998876532
Q ss_pred Eeccc--ccccEEEEEECCCCCEEEEecC---------C-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE
Q psy12614 149 KLLDR--QQGRILCTAWHSSGDYLVTGCA---------A-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT 216 (708)
Q Consensus 149 ~~~~~--~~~~v~~~~~s~d~~~l~~~~~---------d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 216 (708)
..... ....+..++++|+|+++++... . .-.+|.+........+... ......++|+||++
T Consensus 89 ~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~-------~~~pngi~~spdg~ 161 (297)
T 3g4e_A 89 ATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQ-------VDISNGLDWSLDHK 161 (297)
T ss_dssp EECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEE-------ESBEEEEEECTTSC
T ss_pred EecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEeec-------cccccceEEcCCCC
Confidence 22221 2346889999999997765422 1 3455555432222222221 34567899999995
Q ss_pred -E-EEEcCCCcEEEEeC--CCCee-----EEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCC
Q psy12614 217 -I-ITGDSGGFVRFWDG--KTGVQ-----WSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQ 287 (708)
Q Consensus 217 -l-~~~~~dg~i~~wd~--~~~~~-----~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~ 287 (708)
+ ++.+.++.|.+|++ .++.. ...+..+......++++++|++.++....+.|..||..+ |+
T Consensus 162 ~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~t--------G~-- 231 (297)
T 3g4e_A 162 IFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVT--------GK-- 231 (297)
T ss_dssp EEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTT--------CC--
T ss_pred EEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCC--------ce--
Confidence 4 55666789999986 45543 222333446678999999998777777778899999987 65
Q ss_pred CCcceEEeEEEeccccceEEEEEe
Q psy12614 288 GSSVWVRSVNRVIHEGDVKSLALH 311 (708)
Q Consensus 288 ~~~~~~~~~~~~~~~~~v~~l~~~ 311 (708)
....+..+...+++++|.
T Consensus 232 ------~~~~i~~p~~~~t~~~f~ 249 (297)
T 3g4e_A 232 ------RLQTVKLPVDKTTSCCFG 249 (297)
T ss_dssp ------EEEEEECSSSBEEEEEEE
T ss_pred ------EEEEEECCCCCceEEEEe
Confidence 556666666789999997
|
| >1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=99.38 E-value=1.1e-09 Score=118.51 Aligned_cols=302 Identities=11% Similarity=0.139 Sum_probs=194.3
Q ss_pred CCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCC---------c-EEEEEEeCCEEEEEcCCCcEEEEECCCCeEeEEE
Q psy12614 38 SSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSN---------S-IECLTWFNDRLFSGGLQGFVNEYDMRRLNIKSST 107 (708)
Q Consensus 38 ~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~---------~-v~~l~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~ 107 (708)
+..|.+++.++.|.-+|..+|+.+= .+.... .. . -..+++.+..+++++.|+.|..+|..+|+.+..+
T Consensus 70 ~g~vyv~~~~~~v~AlD~~tG~~~W-~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~v~v~~~dg~l~AlDa~TG~~~W~~ 147 (689)
T 1yiq_A 70 DGVMYTTGPFSVVYALDARDGRLIW-KYDPQS-DRHRAGEACCDAVNRGVAVWKGKVYVGVLDGRLEAIDAKTGQRAWSV 147 (689)
T ss_dssp TTEEEEECGGGCEEEEETTTCCEEE-EECCCC-CGGGGGGCTTCSCCCCCEEETTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCEEEEEcCCCeEEEEECCCCceeE-EEcCCC-CccccccccccCCCCccEEECCEEEEEccCCEEEEEECCCCCEeeee
Confidence 5678888888999999999999865 333222 00 0 1223455889999999999999999999998877
Q ss_pred eec--CCceEEEEEec---CCCEEEEEe------CCCcEEEEEccCCcEEEEEecccc----------------------
Q psy12614 108 AVT--SGTCWCLSVHK---KKRLLAAGT------EQGHINLFQISDEGLLYEKLLDRQ---------------------- 154 (708)
Q Consensus 108 ~~~--~~~v~~~~~s~---~~~~la~~~------~d~~i~iwd~~~~~~~~~~~~~~~---------------------- 154 (708)
... ......+..+| ++ .+++++ .++.|+.||..+|+.+........
T Consensus 148 ~~~~~~~~~~~~~~sP~v~~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~ 226 (689)
T 1yiq_A 148 DTRADHKRSYTITGAPRVVNG-KVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDA 226 (689)
T ss_dssp ECCSCTTSCCBCCSCCEEETT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSST
T ss_pred cCcCCCCCCccccCCcEEECC-EEEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCce
Confidence 642 11111111122 44 444443 368999999999998754432110
Q ss_pred -------cccEEEEEECCCCCEEEEecCC-e-------------------EEEEEcCCCceEEEEEecccCC--CCCcee
Q psy12614 155 -------QGRILCTAWHSSGDYLVTGCAA-A-------------------VRVWDIHKGHAIHKMSLDKSSK--FSKNTA 205 (708)
Q Consensus 155 -------~~~v~~~~~s~d~~~l~~~~~d-~-------------------i~iwd~~~~~~~~~~~~~~~~~--~~~~~~ 205 (708)
......++++|++..++.+..+ . |..||..+|+.+..+....... +.....
T Consensus 227 w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~ 306 (689)
T 1yiq_A 227 YVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQH 306 (689)
T ss_dssp HHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSC
T ss_pred eeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCC
Confidence 0111257888988899888776 4 9999999999998887542100 001112
Q ss_pred EEEEEEccCCE----EEEEcCCCcEEEEeCCCCeeEEEeeccc-------------------------------------
Q psy12614 206 VWCVAFCADFT----IITGDSGGFVRFWDGKTGVQWSDVKTHK------------------------------------- 244 (708)
Q Consensus 206 v~~~~~~~~~~----l~~~~~dg~i~~wd~~~~~~~~~~~~~~------------------------------------- 244 (708)
+.......+|+ ++.++.+|.++++|.++|+.+.......
T Consensus 307 ~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~ 386 (689)
T 1yiq_A 307 MILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFW 386 (689)
T ss_dssp EEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTT
T ss_pred cEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcc
Confidence 22222223553 7788899999999999999874432110
Q ss_pred --cCeEEEEEeCCCCEEEEEec---------------------------------------------CCeEEEEEccCCc
Q psy12614 245 --KDILALTVSEDENYLYCAGV---------------------------------------------DPTVVCFQRTRKP 277 (708)
Q Consensus 245 --~~i~~~~~s~~~~~l~~~~~---------------------------------------------dg~i~iw~~~~~~ 277 (708)
..-..++|+|+..++++... +|.|..||+.+
T Consensus 387 Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~t-- 464 (689)
T 1yiq_A 387 GAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVK-- 464 (689)
T ss_dssp CSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTT--
T ss_pred cccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCC--
Confidence 00123789999888887633 36788899988
Q ss_pred ccccCCCCCCCCcceEEeEEEeccccceE-EEEEeCCEEEEEcCCCeEEEEeCCCCc-eeecCc-cCCCCceEEEEcCCc
Q psy12614 278 QVCSTSGPEQGSSVWVRSVNRVIHEGDVK-SLALHGNRLYSGGLDSYLSLSYYPPKT-LVKYPC-TLAQSTPVSLAKDIQ 354 (708)
Q Consensus 278 ~~~~~~g~~~~~~~~~~~~~~~~~~~~v~-~l~~~~~~l~s~~~d~~i~iw~~~~~~-~~~~~~-~~~~~~~~~~s~~~~ 354 (708)
|+ ..| ....+..... .+...+.+++.++.|+.++.||.++++ +.++.. .......+.++.+|+
T Consensus 465 ------G~----~~W----~~~~~~~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~ty~~~G~ 530 (689)
T 1yiq_A 465 ------QQ----AAW----EVPYVTIFNGGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPAASGVMAAPVTYSVDGE 530 (689)
T ss_dssp ------TE----EEE----EEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTE
T ss_pred ------CC----eEe----EccCCCCccCccceECCCEEEEECCCCcEEEEECCCCccceeeeCCCCcccCceEEEECCE
Confidence 65 233 2333322211 222238899999999999999999887 334431 223345688888988
Q ss_pred EEEE
Q psy12614 355 HVLL 358 (708)
Q Consensus 355 ~l~~ 358 (708)
..++
T Consensus 531 qyv~ 534 (689)
T 1yiq_A 531 QYVT 534 (689)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6654
|
| >3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A* | Back alignment and structure |
|---|
Probab=99.38 E-value=2.3e-11 Score=132.69 Aligned_cols=237 Identities=11% Similarity=0.104 Sum_probs=156.9
Q ss_pred cCCCCcEEEEEEcCCCCEEEEEe-----CCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe-CCEEEEEcCCC-----
Q psy12614 23 APEPKVINCIACEPKSSRLAVSR-----ADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF-NDRLFSGGLQG----- 91 (708)
Q Consensus 23 ~~h~~~v~~~~~s~~~~~la~~~-----~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~-~~~l~s~~~d~----- 91 (708)
.+|...+..++|||||++||.+. +...|++||+.+++.+...+.+. ....++|+ ++.|+.++.+.
T Consensus 125 ~~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~----k~~~~~WsDg~~l~y~~~~~~~~~~ 200 (693)
T 3iuj_A 125 PDGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKDV----KFSGISWLGNEGFFYSSYDKPDGSE 200 (693)
T ss_dssp TTSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEEE----ESCCCEEETTTEEEEEESSCCC---
T ss_pred CCCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCCc----eeccEEEeCCCEEEEEEecCccccc
Confidence 34666799999999999999643 23569999999998765433322 12467788 88888887764
Q ss_pred --------cEEEEECCCCeE----eEEEee-cCCceEEEEEecCCCEEEEEeC----CCcEEEEEccCCcEEEEEecccc
Q psy12614 92 --------FVNEYDMRRLNI----KSSTAV-TSGTCWCLSVHKKKRLLAAGTE----QGHINLFQISDEGLLYEKLLDRQ 154 (708)
Q Consensus 92 --------~i~vwd~~~~~~----~~~~~~-~~~~v~~~~~s~~~~~la~~~~----d~~i~iwd~~~~~~~~~~~~~~~ 154 (708)
.|.+|++.++.. +..... |...+..+.|+|||++|+.... .+.|+++|+.++.... ..+..+
T Consensus 201 ~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~-~~l~~~ 279 (693)
T 3iuj_A 201 LSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPL-LTVQGD 279 (693)
T ss_dssp ----CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCC-EEEECS
T ss_pred ccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCce-EEEeCC
Confidence 399999988652 322233 4556788999999998866443 3589999998763211 334444
Q ss_pred cccEEEEEECCCCCEEEEec-C---C-eEEEEEcCCCce--EEEEEecccCCCCCceeEEEEEEccCCE-EEEEc-CCC-
Q psy12614 155 QGRILCTAWHSSGDYLVTGC-A---A-AVRVWDIHKGHA--IHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGD-SGG- 224 (708)
Q Consensus 155 ~~~v~~~~~s~d~~~l~~~~-~---d-~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~-~dg- 224 (708)
....... |+++|..|+..+ . . .|..+|+.++.. ...+... ...+. .|++++. ++... .++
T Consensus 280 ~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~-------~~~~~--~~s~~g~~lv~~~~~~g~ 349 (693)
T 3iuj_A 280 LDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPE-------RQQVL--TVHSGSGYLFAEYMVDAT 349 (693)
T ss_dssp SSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECC-------CSSCE--EEEEETTEEEEEEEETTE
T ss_pred CCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecC-------CCCEE--EEEEECCEEEEEEEECCe
Confidence 5544444 667776665443 2 3 699999987654 2344332 22233 7788774 55444 344
Q ss_pred -cEEEEeCCCCeeEEEee-ccccCeEEEEEeCCCCEEEEEecC----CeEEEEEccC
Q psy12614 225 -FVRFWDGKTGVQWSDVK-THKKDILALTVSEDENYLYCAGVD----PTVVCFQRTR 275 (708)
Q Consensus 225 -~i~~wd~~~~~~~~~~~-~~~~~i~~~~~s~~~~~l~~~~~d----g~i~iw~~~~ 275 (708)
.|++|++..+ ....+. .....+..+.++++++.++....+ +.+..||+.+
T Consensus 350 ~~l~~~d~~g~-~~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~ 405 (693)
T 3iuj_A 350 ARVEQFDYEGK-RVREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKS 405 (693)
T ss_dssp EEEEEECTTSC-EEEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTT
T ss_pred eEEEEEECCCC-eeEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCC
Confidence 6899998754 344443 234567778888888877766554 7899999877
|
| >3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus} | Back alignment and structure |
|---|
Probab=99.38 E-value=1.9e-10 Score=114.65 Aligned_cols=286 Identities=9% Similarity=0.041 Sum_probs=184.4
Q ss_pred CCCCEEEEEeCC-----CcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEc----------CCCcEEEEEC
Q psy12614 36 PKSSRLAVSRAD-----QSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGG----------LQGFVNEYDM 98 (708)
Q Consensus 36 ~~~~~la~~~~d-----g~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~----------~d~~i~vwd~ 98 (708)
|+++++.+.... +.|.++|..+++.+. .+..-. .+ .++++ +++|+++. .++.|.++|.
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~-~I~vG~--~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~ 156 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILG-MTDGGF--LP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDP 156 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEEE-EEEECS--SC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECT
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEEE-EEECCC--CC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEEC
Confidence 577777766542 699999999999887 454434 45 89999 88787775 4779999999
Q ss_pred CCCeEeEEEeec-------CCceEEEEEecCCCEEEEEeC--CCcEEEEEccCCcEEEEEecccccccEEEEEECCCC-C
Q psy12614 99 RRLNIKSSTAVT-------SGTCWCLSVHKKKRLLAAGTE--QGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSG-D 168 (708)
Q Consensus 99 ~~~~~~~~~~~~-------~~~v~~~~~s~~~~~la~~~~--d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~-~ 168 (708)
.+++.+..+... ......++|+|||++|+++.. ++.|.+.|..+++.+......+ . ....|++ .
T Consensus 157 ~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g---~---~~~~p~g~~ 230 (426)
T 3c75_H 157 VTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPD---C---YHIFPASPT 230 (426)
T ss_dssp TTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS---E---EEEEEEETT
T ss_pred CCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCC---c---eeeccCCCc
Confidence 999998887642 234567999999999998864 5789999999998874333221 1 1222332 3
Q ss_pred EEEEecCC-eEEEEEcCCCceEEEEE-ecccCCCCCceeEEEEEEccCC-EEEEEcCCCcEEEEeCCCCeeE--EEeec-
Q psy12614 169 YLVTGCAA-AVRVWDIHKGHAIHKMS-LDKSSKFSKNTAVWCVAFCADF-TIITGDSGGFVRFWDGKTGVQW--SDVKT- 242 (708)
Q Consensus 169 ~l~~~~~d-~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~-~l~~~~~dg~i~~wd~~~~~~~--~~~~~- 242 (708)
.+++.+.| .+.+.+..+++...... .... ........+.|.+++ +++.....+.|.+.|...+... ..+..
T Consensus 231 ~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v---~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~ 307 (426)
T 3c75_H 231 VFYMNCRDGSLARVDFADGETKVTNTEVFHT---EDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEAL 307 (426)
T ss_dssp EEEEEETTSSEEEEECCTTCCEEEECCCCSC---TTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESS
T ss_pred EEEEEcCCCCEEEEECCCCcEEEEeeeeecc---CCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeec
Confidence 44444455 66666665554443211 0000 001111235678887 4666677889999998655422 11110
Q ss_pred ---------cccCeEEEEEeCCCCEEEEEec----------CCeEEEEEccCCcccccCCCCCCCCcceEEeEEEecccc
Q psy12614 243 ---------HKKDILALTVSEDENYLYCAGV----------DPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEG 303 (708)
Q Consensus 243 ---------~~~~i~~~~~s~~~~~l~~~~~----------dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 303 (708)
.......++++|++++++++.. ++.|.++|..+ .+ ....+.. ..
T Consensus 308 ~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T--------~k--------vv~~I~v-g~ 370 (426)
T 3c75_H 308 TEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAET--------GE--------RINKIEL-GH 370 (426)
T ss_dssp CTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTT--------CC--------EEEEEEE-EE
T ss_pred cccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCC--------Ce--------EEEEEEC-CC
Confidence 1122234789999998887753 35799999998 54 3333332 22
Q ss_pred ceEEEEEe--CC-EEEEEc-CCCeEEEEeCCCCceeecCccCCCCceEEEEcC
Q psy12614 304 DVKSLALH--GN-RLYSGG-LDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKD 352 (708)
Q Consensus 304 ~v~~l~~~--~~-~l~s~~-~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~ 352 (708)
...+++++ ++ ++++.. .++.|.++|+.+.+..+........+.+.++||
T Consensus 371 ~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv~tI~~vG~~P~~i~~~~ 423 (426)
T 3c75_H 371 EIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEELRSVDQLGRGPQIITTHD 423 (426)
T ss_dssp EECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEECCCSSSCCEEECCC
T ss_pred CcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEEEEecCCCCCCcEEEcCC
Confidence 47788888 66 777776 599999999999874433213445555666665
|
| >3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis} | Back alignment and structure |
|---|
Probab=99.38 E-value=1.2e-11 Score=122.17 Aligned_cols=296 Identities=12% Similarity=0.039 Sum_probs=196.7
Q ss_pred EEe-CCEEEEEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccc
Q psy12614 78 TWF-NDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQG 156 (708)
Q Consensus 78 ~~~-~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~ 156 (708)
... +..|..++.++.|..|| .+++.+.........+.++...+++. |.+++.+ |..+|. +++.. ..+.....
T Consensus 26 ~~d~~g~l~v~t~~~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~--l~~~d~-~g~~~--~~~~~~~~ 98 (330)
T 3hxj_A 26 ILAKNGTIYLGSSNKNLYAIN-TDGSVKWFFKSGEIIECRPSIGKDGT-IYFGSDK--VYAINP-DGTEK--WRFDTKKA 98 (330)
T ss_dssp EECTTSCEECSSTTTTTEEEC-TTSCEEESSCGGGEEEECCEETTTTE-ECCSSCE--EEEECC-CGGGG--GGSCC---
T ss_pred eEccCCeEEEEcCCCEEEEEC-CCCcEEEEEecCCCcccceEEecCCc-EEEecCc--EEEECC-CCcEE--EEEECCCC
Confidence 443 66788888899999999 88887766655555667777877775 4444444 888886 44432 12222222
Q ss_pred cEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEEEEcCCCcEEEEeCCCCe
Q psy12614 157 RILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGV 235 (708)
Q Consensus 157 ~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~wd~~~~~ 235 (708)
......+. +..|..++.+ .|..+|.. ++........ ...+.++...+++.+..++.++.|..+|.. ++
T Consensus 99 ~~~~~~~~--~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~-------~~~~~~~~~~~~g~l~vgt~~~~l~~~d~~-g~ 167 (330)
T 3hxj_A 99 IVSDFTIF--EDILYVTSMDGHLYAINTD-GTEKWRFKTK-------KAIYATPIVSEDGTIYVGSNDNYLYAINPD-GT 167 (330)
T ss_dssp --CCEEEE--TTEEEEECTTSEEEEECTT-SCEEEEEECS-------SCCCSCCEECTTSCEEEECTTSEEEEECTT-SC
T ss_pred cccCceEE--CCEEEEEecCCEEEEEcCC-CCEEEEEcCC-------CceeeeeEEcCCCEEEEEcCCCEEEEECCC-CC
Confidence 22223333 4467777777 99999988 8777666543 344566677778888889999999999998 88
Q ss_pred eEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe-CCE
Q psy12614 236 QWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH-GNR 314 (708)
Q Consensus 236 ~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~-~~~ 314 (708)
....+......+.++...+++... .++ +.+..+| .+ ++ ...........+.++... ...
T Consensus 168 ~~~~~~~~~~~~~~~~~d~~g~l~-v~t--~~l~~~d-~~--------g~--------~~~~~~~~~~~~~~~~~~~~g~ 227 (330)
T 3hxj_A 168 EKWRFKTNDAITSAASIGKDGTIY-FGS--DKVYAIN-PD--------GT--------EKWNFYAGYWTVTRPAISEDGT 227 (330)
T ss_dssp EEEEEECSSCCCSCCEECTTCCEE-EES--SSEEEEC-TT--------SC--------EEEEECCSSCCCSCCEECTTSC
T ss_pred EeEEEecCCCceeeeEEcCCCEEE-EEe--CEEEEEC-CC--------Cc--------EEEEEccCCcceeceEECCCCe
Confidence 777766556677778888888644 444 7899999 55 43 233333344567777777 447
Q ss_pred EEEEcCCCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEEEcCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceE
Q psy12614 315 LYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRL 394 (708)
Q Consensus 315 l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (708)
+..++.++.+..++.....+..+.........+.+.+++.+.+...++.+..++. +++ .
T Consensus 228 l~v~t~~~gl~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~v~t~~ggl~~~d~-~g~--------------------~ 286 (330)
T 3hxj_A 228 IYVTSLDGHLYAINPDGTEKWRFKTGKRIESSPVIGNTDTIYFGSYDGHLYAINP-DGT--------------------E 286 (330)
T ss_dssp EEEEETTTEEEEECTTSCEEEEEECSSCCCSCCEECTTSCEEEECTTCEEEEECT-TSC--------------------E
T ss_pred EEEEcCCCeEEEECCCCCEeEEeeCCCCccccceEcCCCeEEEecCCCCEEEECC-CCc--------------------E
Confidence 7778888888888866655554442333334566677888887778888999885 433 2
Q ss_pred EEEEEecCCCceEEEEeCCCCcEEEEEcCCceEEEEEEe
Q psy12614 395 IVKMSAVNNATIRCSVVSNDGKYVAYSTESCVRLHSLDL 433 (708)
Q Consensus 395 ~~~~~~~~~~~i~~~~~s~~g~~l~~~~d~~i~i~~~~~ 433 (708)
+.... .....+.++...++|.+.+.+.+|.+++...+.
T Consensus 287 ~~~~~-~~~~~~~~~~~d~~g~l~~gt~~G~~~~~~~~~ 324 (330)
T 3hxj_A 287 KWNFE-TGSWIIATPVIDENGTIYFGTRNGKFYALFNLE 324 (330)
T ss_dssp EEEEE-CSSCCCSCCEECTTCCEEEECTTSCEEEEEC--
T ss_pred EEEEE-cCCccccceEEcCCCEEEEEcCCCeEEEEeccc
Confidence 33332 234556677788889877777799988876654
|
| >3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis} | Back alignment and structure |
|---|
Probab=99.37 E-value=2.2e-11 Score=120.41 Aligned_cols=298 Identities=9% Similarity=0.035 Sum_probs=197.8
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe-CCEEEEEcCCCcEEEEECCCCeEeEEEee
Q psy12614 31 CIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF-NDRLFSGGLQGFVNEYDMRRLNIKSSTAV 109 (708)
Q Consensus 31 ~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~-~~~l~s~~~d~~i~vwd~~~~~~~~~~~~ 109 (708)
+..+..++. |.+++.++.|..|| .+++.+. ....+. ..+.++... +..|..++.+ |..+|. +++.+..+..
T Consensus 24 ~~~~d~~g~-l~v~t~~~~l~~~d-~~g~~~~-~~~~~~--~~~~~~~~~~~g~l~v~t~~--l~~~d~-~g~~~~~~~~ 95 (330)
T 3hxj_A 24 SPILAKNGT-IYLGSSNKNLYAIN-TDGSVKW-FFKSGE--IIECRPSIGKDGTIYFGSDK--VYAINP-DGTEKWRFDT 95 (330)
T ss_dssp CCEECTTSC-EECSSTTTTTEEEC-TTSCEEE-SSCGGG--EEEECCEETTTTEECCSSCE--EEEECC-CGGGGGGSCC
T ss_pred CceEccCCe-EEEEcCCCEEEEEC-CCCcEEE-EEecCC--CcccceEEecCCcEEEecCc--EEEECC-CCcEEEEEEC
Confidence 445555654 66667788999999 7777643 333222 445667776 6777777666 888886 6655444333
Q ss_pred cCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCce
Q psy12614 110 TSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHA 188 (708)
Q Consensus 110 ~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~ 188 (708)
.........+. +..|.+++.++.|..+|.. ++.... .......+.++...+++. |..++.+ .|..+|.. ++.
T Consensus 96 ~~~~~~~~~~~--~~~l~v~t~~~~l~~~d~~-g~~~~~--~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~ 168 (330)
T 3hxj_A 96 KKAIVSDFTIF--EDILYVTSMDGHLYAINTD-GTEKWR--FKTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTE 168 (330)
T ss_dssp -----CCEEEE--TTEEEEECTTSEEEEECTT-SCEEEE--EECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SCE
T ss_pred CCCcccCceEE--CCEEEEEecCCEEEEEcCC-CCEEEE--EcCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCE
Confidence 32223333444 4567778888999999988 766533 233344556677777787 5556666 99999998 887
Q ss_pred EEEEEecccCCCCCceeEEEEEEccCCEEEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEecCCeE
Q psy12614 189 IHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTV 268 (708)
Q Consensus 189 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i 268 (708)
....... ...+.++...+++.+..++ +.|..+| .+++...........+.++...+++. |..++.++.+
T Consensus 169 ~~~~~~~-------~~~~~~~~~d~~g~l~v~t--~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~~gl 237 (330)
T 3hxj_A 169 KWRFKTN-------DAITSAASIGKDGTIYFGS--DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGT-IYVTSLDGHL 237 (330)
T ss_dssp EEEEECS-------SCCCSCCEECTTCCEEEES--SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTSC-EEEEETTTEE
T ss_pred eEEEecC-------CCceeeeEEcCCCEEEEEe--CEEEEEC-CCCcEEEEEccCCcceeceEECCCCe-EEEEcCCCeE
Confidence 7776643 3456667777888877777 8899999 77877776665566788888888874 5567778888
Q ss_pred EEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe-CCEEEEEcCCCeEEEEeCCCCceeecCccCCCCceE
Q psy12614 269 VCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH-GNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPV 347 (708)
Q Consensus 269 ~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~-~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~ 347 (708)
..++.. ++ ...........+.++... +..|..++.++.+..+|........+..+.....++
T Consensus 238 ~~~~~~---------g~--------~~~~~~~~~~~~~~~~~~~~g~l~v~t~~ggl~~~d~~g~~~~~~~~~~~~~~~~ 300 (330)
T 3hxj_A 238 YAINPD---------GT--------EKWRFKTGKRIESSPVIGNTDTIYFGSYDGHLYAINPDGTEKWNFETGSWIIATP 300 (330)
T ss_dssp EEECTT---------SC--------EEEEEECSSCCCSCCEECTTSCEEEECTTCEEEEECTTSCEEEEEECSSCCCSCC
T ss_pred EEECCC---------CC--------EeEEeeCCCCccccceEcCCCeEEEecCCCCEEEECCCCcEEEEEEcCCccccce
Confidence 888753 32 222333333334455566 678888999989999997544444443233445667
Q ss_pred EEEcCCcEEEEEcCCeEEEEEecC
Q psy12614 348 SLAKDIQHVLLQYTSHLELWSLGS 371 (708)
Q Consensus 348 ~~s~~~~~l~~~~~~~i~i~~~~~ 371 (708)
...++|++.+.+.++.+.+.....
T Consensus 301 ~~d~~g~l~~gt~~G~~~~~~~~~ 324 (330)
T 3hxj_A 301 VIDENGTIYFGTRNGKFYALFNLE 324 (330)
T ss_dssp EECTTCCEEEECTTSCEEEEEC--
T ss_pred EEcCCCEEEEEcCCCeEEEEeccc
Confidence 778899998888899888877654
|
| >3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.35 E-value=4.9e-10 Score=108.97 Aligned_cols=239 Identities=12% Similarity=-0.002 Sum_probs=157.5
Q ss_pred EeEEEeecCCceEEEEEecCCC-EEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEE
Q psy12614 103 IKSSTAVTSGTCWCLSVHKKKR-LLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRV 180 (708)
Q Consensus 103 ~~~~~~~~~~~v~~~~~s~~~~-~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~i 180 (708)
.+..+..........+|+|+++ ++++...++.|..|+. +++. ..+..+...+..++++++|+++++...+ .|.+
T Consensus 36 ~~~~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~~---~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~ 111 (305)
T 3dr2_A 36 RLLTLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGTV---DVLLDATAFTNGNAVDAQQRLVHCEHGRRAITR 111 (305)
T ss_dssp CCEEEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSCE---EEEEESCSCEEEEEECTTSCEEEEETTTTEEEE
T ss_pred ceEEEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCCE---EEEeCCCCccceeeECCCCCEEEEECCCCEEEE
Confidence 3444554556778899999998 5566667889999998 4544 2344456678999999999977766666 8999
Q ss_pred EEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEEEE-----cC-------------CCcEEEEeCCCCeeEEEeec
Q psy12614 181 WDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITG-----DS-------------GGFVRFWDGKTGVQWSDVKT 242 (708)
Q Consensus 181 wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~-----~~-------------dg~i~~wd~~~~~~~~~~~~ 242 (708)
|+.. ++.......... .....+..+++.++|++... .. .+.|..||..+++.....
T Consensus 112 ~~~~-g~~~~~~~~~~~---~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-- 185 (305)
T 3dr2_A 112 SDAD-GQAHLLVGRYAG---KRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-- 185 (305)
T ss_dssp ECTT-SCEEEEECEETT---EECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--
T ss_pred ECCC-CCEEEEEeccCC---CccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--
Confidence 9985 554322211110 00234668999999986653 21 356888888777654433
Q ss_pred cccCeEEEEEeCCCCEEEEEecC------CeEEEEEccCCcccccCCCCCCCCcceEEeEEE-eccccceEEEEEe--CC
Q psy12614 243 HKKDILALTVSEDENYLYCAGVD------PTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNR-VIHEGDVKSLALH--GN 313 (708)
Q Consensus 243 ~~~~i~~~~~s~~~~~l~~~~~d------g~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~v~~l~~~--~~ 313 (708)
.......++|+||++.|+.+... +.|..|++.. +. ......+ .........++++ |+
T Consensus 186 ~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~--------~~------l~~~~~~~~~~~~~pdgi~~d~~G~ 251 (305)
T 3dr2_A 186 DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRD--------GA------LHDRRHFASVPDGLPDGFCVDRGGW 251 (305)
T ss_dssp EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEET--------TE------EEEEEEEECCSSSCCCSEEECTTSC
T ss_pred cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecC--------CC------ccCCeEEEECCCCCCCeEEECCCCC
Confidence 34566889999999988887765 6899999875 21 0011111 1123345567777 55
Q ss_pred EEEEEcCCCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEEEcCCeEEEEE
Q psy12614 314 RLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWS 368 (708)
Q Consensus 314 ~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~ 368 (708)
|.+++.+ .|.+|+.....+..+..+. ....++|+++++.|..+..+.+..++
T Consensus 252 -lwv~~~~-gv~~~~~~g~~~~~~~~~~-~~~~~~f~~d~~~L~it~~~~l~~~~ 303 (305)
T 3dr2_A 252 -LWSSSGT-GVCVFDSDGQLLGHIPTPG-TASNCTFDQAQQRLFITGGPCLWMLP 303 (305)
T ss_dssp -EEECCSS-EEEEECTTSCEEEEEECSS-CCCEEEECTTSCEEEEEETTEEEEEE
T ss_pred -EEEecCC-cEEEECCCCCEEEEEECCC-ceeEEEEeCCCCEEEEEcCCeEEEEE
Confidence 5555544 5999999777666655333 57789999999888877666665544
|
| >1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C* | Back alignment and structure |
|---|
Probab=99.35 E-value=2.1e-11 Score=119.69 Aligned_cols=170 Identities=6% Similarity=0.026 Sum_probs=131.2
Q ss_pred CcEEEEEEe--CCEEEEEcCCCcEEEEECCCCe---------E-eEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEE
Q psy12614 72 NSIECLTWF--NDRLFSGGLQGFVNEYDMRRLN---------I-KSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQ 139 (708)
Q Consensus 72 ~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~~---------~-~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd 139 (708)
.++..++++ .+++++|+.+ .+++|+++..+ . ......+.. |+.++| |+++|+++ .++.|++||
T Consensus 38 ~~~nlLais~~~gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~d 112 (388)
T 1xip_A 38 ASLQNLDISNSKSLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVS-TRNALYSLD 112 (388)
T ss_dssp SCCBCEEEETTTTEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEE-ESSEEEEEE
T ss_pred ccccEEEEcCCCCEEEEeCCC-EEEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEE-cCCcEEEEE
Confidence 458899999 7888888887 45569865433 1 112234566 999999 99999998 889999999
Q ss_pred ccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEE
Q psy12614 140 ISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTII 218 (708)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~ 218 (708)
+.+.... .....+...+.++.+.+.. +++++.| .|.+||+.++.... + ...|.+++|+|+| ++
T Consensus 113 v~sl~~~--~~~~~~~~~v~~i~~~~p~--~av~~~dG~L~v~dl~~~~~~~-~----------~~~Vs~v~WSpkG-~~ 176 (388)
T 1xip_A 113 LEELSEF--RTVTSFEKPVFQLKNVNNT--LVILNSVNDLSALDLRTKSTKQ-L----------AQNVTSFDVTNSQ-LA 176 (388)
T ss_dssp SSSTTCE--EEEEECSSCEEEEEECSSE--EEEEETTSEEEEEETTTCCEEE-E----------EESEEEEEECSSE-EE
T ss_pred chhhhcc--CccceeecceeeEEecCCC--EEEEECCCCEEEEEccCCcccc-c----------cCCceEEEEcCCc-eE
Confidence 9876643 4455667778888877553 8888888 99999999887643 2 4579999999999 78
Q ss_pred EEcCCCcEEEEeCCCCee--EEEe------e---ccccCeEEEEEeCCCCEEEEE
Q psy12614 219 TGDSGGFVRFWDGKTGVQ--WSDV------K---THKKDILALTVSEDENYLYCA 262 (708)
Q Consensus 219 ~~~~dg~i~~wd~~~~~~--~~~~------~---~~~~~i~~~~~s~~~~~l~~~ 262 (708)
.|..||.+++|+...++. ..++ . +|...|.++.|.+++.++++=
T Consensus 177 vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y 231 (388)
T 1xip_A 177 VLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVF 231 (388)
T ss_dssp EEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEE
T ss_pred EEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEE
Confidence 899999999999877765 5555 2 367889999999999887753
|
| >1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1 | Back alignment and structure |
|---|
Probab=99.33 E-value=1.5e-09 Score=116.99 Aligned_cols=302 Identities=12% Similarity=0.090 Sum_probs=197.1
Q ss_pred CCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCC---------CcEEEEEEeCCEEEEEcCCCcEEEEECCCCeEeEEEe
Q psy12614 38 SSRLAVSRADQSIEIWDISETPHVDRVFIGDPLS---------NSIECLTWFNDRLFSGGLQGFVNEYDMRRLNIKSSTA 108 (708)
Q Consensus 38 ~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~---------~~v~~l~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~ 108 (708)
+..|.+++.++.|.-+|..+|+.+= .+....-. ..-..+++.++.|++++.|+.|..+|..+|+.+..+.
T Consensus 77 ~g~vyv~~~~~~v~AlD~~tG~~~W-~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~dg~l~alD~~tG~~~W~~~ 155 (677)
T 1kb0_A 77 DGIMYVSASWSVVHAIDTRTGNRIW-TYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAWDGRLIALDAATGKEVWHQN 155 (677)
T ss_dssp TTEEEEECGGGCEEEEETTTTEEEE-EECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred CCEEEEECCCCeEEEEECCCCcEEE-EEcCCCCccccccccccCCCCCceEECCEEEEEcCCCEEEEEECCCCCEEeeec
Confidence 5567777778999999999998765 33322100 0112445568899999999999999999999998887
Q ss_pred ec-C----CceEEEEEecCCCEEEEEeC------CCcEEEEEccCCcEEEEEeccccc----------------------
Q psy12614 109 VT-S----GTCWCLSVHKKKRLLAAGTE------QGHINLFQISDEGLLYEKLLDRQQ---------------------- 155 (708)
Q Consensus 109 ~~-~----~~v~~~~~s~~~~~la~~~~------d~~i~iwd~~~~~~~~~~~~~~~~---------------------- 155 (708)
.. . ..+.+--.- .+..+++++. ++.|+.+|..+|+.+.........
T Consensus 156 ~~~~~~~~~~~~~~p~v-~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~ 234 (677)
T 1kb0_A 156 TFEGQKGSLTITGAPRV-FKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGK 234 (677)
T ss_dssp TTTTCCSSCBCCSCCEE-ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGC
T ss_pred CCcCcCcCcccccCcEE-ECCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCccccccccccccccccccccCc
Confidence 54 1 122211111 2345555543 689999999999988654432211
Q ss_pred --------ccEEEEEECCCCCEEEEecCC--------------------eEEEEEcCCCceEEEEEecccCC--CCCcee
Q psy12614 156 --------GRILCTAWHSSGDYLVTGCAA--------------------AVRVWDIHKGHAIHKMSLDKSSK--FSKNTA 205 (708)
Q Consensus 156 --------~~v~~~~~s~d~~~l~~~~~d--------------------~i~iwd~~~~~~~~~~~~~~~~~--~~~~~~ 205 (708)
.....++++|++..|+.+..+ .|..+|..+|+.+..+....... +.....
T Consensus 235 ~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~ 314 (677)
T 1kb0_A 235 WWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQP 314 (677)
T ss_dssp HHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSC
T ss_pred eeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCC
Confidence 011357888999888887655 29999999999998887642100 000111
Q ss_pred EEEEEEccCC---E-EEEEcCCCcEEEEeCCCCeeEEEeecccc-----------Ce-----------------------
Q psy12614 206 VWCVAFCADF---T-IITGDSGGFVRFWDGKTGVQWSDVKTHKK-----------DI----------------------- 247 (708)
Q Consensus 206 v~~~~~~~~~---~-l~~~~~dg~i~~wd~~~~~~~~~~~~~~~-----------~i----------------------- 247 (708)
..-+....+| . ++.++.+|.++++|..+|+.+..+..... .+
T Consensus 315 p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~ 394 (677)
T 1kb0_A 315 MILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHN 394 (677)
T ss_dssp CEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSC
T ss_pred cEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccC
Confidence 2222333466 3 78889999999999999998876542210 01
Q ss_pred -EEEEEeCCCCEEEEEecC-------------------------------------------CeEEEEEccCCcccccCC
Q psy12614 248 -LALTVSEDENYLYCAGVD-------------------------------------------PTVVCFQRTRKPQVCSTS 283 (708)
Q Consensus 248 -~~~~~s~~~~~l~~~~~d-------------------------------------------g~i~iw~~~~~~~~~~~~ 283 (708)
..++|+|++.++++...+ |.|..||+.+
T Consensus 395 w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~t-------- 466 (677)
T 1kb0_A 395 WHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVA-------- 466 (677)
T ss_dssp SSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTT--------
T ss_pred CCCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCC--------
Confidence 157889998888876432 6788999988
Q ss_pred CCCCCCcceEEeEEEeccccceEEEEEe--CCEEEEEcCCCeEEEEeCCCCc-eeecC-ccCCCCceEEEEcCCcEEEE
Q psy12614 284 GPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSGGLDSYLSLSYYPPKT-LVKYP-CTLAQSTPVSLAKDIQHVLL 358 (708)
Q Consensus 284 g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~~~-~~~~~-~~~~~~~~~~~s~~~~~l~~ 358 (708)
|+ ..|. .. +...+.+..+. +..++.++.|+.+++||..+++ +..+. ........+.+..+|+..+.
T Consensus 467 G~----~~W~----~~-~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~y~~~G~~~v~ 536 (677)
T 1kb0_A 467 QK----AAWS----VE-HVSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAAPSTYMVDGRQYVS 536 (677)
T ss_dssp TE----EEEE----EE-ESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEE
T ss_pred Cc----EEee----cC-CCCCCcCcceEeCCCEEEEECCCCcEEEEECCCCceeeeeeCCCCcccCCEEEEeCCEEEEE
Confidence 64 3332 22 22233333333 8889999999999999999877 33333 12234456777888876554
|
| >2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1 | Back alignment and structure |
|---|
Probab=99.30 E-value=1.6e-08 Score=99.11 Aligned_cols=209 Identities=14% Similarity=0.027 Sum_probs=141.8
Q ss_pred CcEEEEEEe--CC-EEEEEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEE
Q psy12614 72 NSIECLTWF--ND-RLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYE 148 (708)
Q Consensus 72 ~~v~~l~~~--~~-~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~ 148 (708)
.-..+.+|+ ++ .+++...++.|..||..+++... +. ....+.+++++++|+++++. .+ .|.+||..+++....
T Consensus 49 ~~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~~-~~-~~~~v~~i~~~~dg~l~v~~-~~-gl~~~d~~~g~~~~~ 124 (326)
T 2ghs_A 49 LLGEGPTFDPASGTAWWFNILERELHELHLASGRKTV-HA-LPFMGSALAKISDSKQLIAS-DD-GLFLRDTATGVLTLH 124 (326)
T ss_dssp SBEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEEE-EE-CSSCEEEEEEEETTEEEEEE-TT-EEEEEETTTCCEEEE
T ss_pred CCCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEEE-EE-CCCcceEEEEeCCCeEEEEE-CC-CEEEEECCCCcEEEE
Confidence 345778888 34 55566678999999999876532 32 34679999999999877654 44 499999988886532
Q ss_pred Eeccc--ccccEEEEEECCCCCEEEEecC------C-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-E-
Q psy12614 149 KLLDR--QQGRILCTAWHSSGDYLVTGCA------A-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-I- 217 (708)
Q Consensus 149 ~~~~~--~~~~v~~~~~s~d~~~l~~~~~------d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l- 217 (708)
..... ....+..++++|+|+++++... . .|..++ +++.. .+... ......++|+||++ +
T Consensus 125 ~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~-~~~~~-------~~~~~~i~~s~dg~~ly 194 (326)
T 2ghs_A 125 AELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVT-KLFAD-------ISIPNSICFSPDGTTGY 194 (326)
T ss_dssp ECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEE-EEEEE-------ESSEEEEEECTTSCEEE
T ss_pred eeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEE-EeeCC-------CcccCCeEEcCCCCEEE
Confidence 22211 1246899999999997765532 2 555555 45433 22221 23467899999995 4
Q ss_pred EEEcCCCcEEEEeCC--CC-e-----eEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCC
Q psy12614 218 ITGDSGGFVRFWDGK--TG-V-----QWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGS 289 (708)
Q Consensus 218 ~~~~~dg~i~~wd~~--~~-~-----~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~ 289 (708)
++...++.|.+||.. ++ + ....+.........++++++|++.++...++.|..|+. . ++
T Consensus 195 v~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~--------g~---- 261 (326)
T 2ghs_A 195 FVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-D--------GN---- 261 (326)
T ss_dssp EEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-T--------CC----
T ss_pred EEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-C--------CC----
Confidence 455567899999985 55 3 22233333456778999999987777666789999998 4 43
Q ss_pred cceEEeEEEeccccceEEEEEe
Q psy12614 290 SVWVRSVNRVIHEGDVKSLALH 311 (708)
Q Consensus 290 ~~~~~~~~~~~~~~~v~~l~~~ 311 (708)
....+..+...+.+++|.
T Consensus 262 ----~~~~i~~~~~~~~~~af~ 279 (326)
T 2ghs_A 262 ----HIARYEVPGKQTTCPAFI 279 (326)
T ss_dssp ----EEEEEECSCSBEEEEEEE
T ss_pred ----EEEEEECCCCCcEEEEEe
Confidence 344555566678999987
|
| >1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1 | Back alignment and structure |
|---|
Probab=99.27 E-value=1.4e-10 Score=113.83 Aligned_cols=256 Identities=8% Similarity=-0.100 Sum_probs=162.6
Q ss_pred cEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEe----------CCCcEEEEEccCCcEEEEEecccc-----cc
Q psy12614 92 FVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGT----------EQGHINLFQISDEGLLYEKLLDRQ-----QG 156 (708)
Q Consensus 92 ~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~----------~d~~i~iwd~~~~~~~~~~~~~~~-----~~ 156 (708)
+|.+.|..+++.+.++..-..+ .++++||+++++++. .++.|.+||..+++.+....+.+. ..
T Consensus 47 ~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~ 124 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGP 124 (368)
T ss_dssp EEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSC
T ss_pred eEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCC
Confidence 8889999999999998865555 799999999998886 368899999999998743333210 12
Q ss_pred cEEEEEECCCCCEEEEecC--C-eEEE--EEcCCCceEEEEEecccCCCCCceeEEEEEEccCC--EEEEEcCCCcEEEE
Q psy12614 157 RILCTAWHSSGDYLVTGCA--A-AVRV--WDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADF--TIITGDSGGFVRFW 229 (708)
Q Consensus 157 ~v~~~~~s~d~~~l~~~~~--d-~i~i--wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~l~~~~~dg~i~~w 229 (708)
....++|+|||++++++.. + .+.+ +|..+ +..+..+ .. ..+.|++ .+++.+.||.+.+.
T Consensus 125 ~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~-------~~----~~~~p~g~~~~~~~~~dg~~~~v 190 (368)
T 1mda_H 125 RVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKSA-------SC----FHIHPGAAATHYLGSCPASLAAS 190 (368)
T ss_dssp CTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEECS-------SC----CCCEEEETTEEECCCCTTSCEEE
T ss_pred CcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEECC-------Cc----eEEccCCCeEEEEEcCCCCEEEE
Confidence 3568899999999998763 3 6888 99877 4555432 11 1233555 36677778888888
Q ss_pred eCCC-----CeeEEE----eeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEec
Q psy12614 230 DGKT-----GVQWSD----VKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVI 300 (708)
Q Consensus 230 d~~~-----~~~~~~----~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 300 (708)
|+.+ ++.... +.....+. . ++++..++..+. +.+.+.|... +. .
T Consensus 191 d~~~~~~~~~~v~~~~t~~i~vg~~P~---~-~~~~~~~~~vs~-~~V~viD~~~--------~~----------~---- 243 (368)
T 1mda_H 191 DLAAAPAAAGIVGAQCTGAQNCSSQAA---Q-ANYPGMLVWAVA-SSILQGDIPA--------AG----------A---- 243 (368)
T ss_dssp ECCSSCCCCEECCCCSCTTSCBCSCCE---E-ETTTTEEEECBS-SCCEEEECCS--------SC----------C----
T ss_pred ECccccccCCeEEEEeeeeeeCCCCcc---c-cccCCEEEEEcC-CEEEEEECCC--------Cc----------c----
Confidence 8876 433211 11112232 3 666666666666 8888888765 21 0
Q ss_pred cccceEEEEEeCCEEEEEcCCCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEEE-c-C--------CeEEEEEec
Q psy12614 301 HEGDVKSLALHGNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQ-Y-T--------SHLELWSLG 370 (708)
Q Consensus 301 ~~~~v~~l~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~-~-~--------~~i~i~~~~ 370 (708)
..+..|.+.................++++|+++.+.+. . . +.+.++|..
T Consensus 244 ---------------------~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~ 302 (368)
T 1mda_H 244 ---------------------TMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTAS 302 (368)
T ss_dssp ---------------------EEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESS
T ss_pred ---------------------eEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECC
Confidence 00111221110000000001112337899998887764 3 2 357799998
Q ss_pred CCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEE-E-E-cCCceEEEEEEe
Q psy12614 371 SAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVA-Y-S-TESCVRLHSLDL 433 (708)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~-~-~-~d~~i~i~~~~~ 433 (708)
+.+ .+..+..+ .....++|+|||++++ + . .++.|.++|+.+
T Consensus 303 t~~--------------------vv~~i~vg--~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t 346 (368)
T 1mda_H 303 VGQ--------------------TSGPISNG--HDSDAIIAAQDGASDNYANSAGTEVLDIYDAAS 346 (368)
T ss_dssp SCC--------------------EEECCEEE--EEECEEEECCSSSCEEEEEETTTTEEEEEESSS
T ss_pred CCe--------------------EEEEEECC--CCcceEEECCCCCEEEEEccCCCCeEEEEECCC
Confidence 866 33333332 2578899999998544 4 4 489999999986
|
| >1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=99.23 E-value=5.1e-09 Score=113.22 Aligned_cols=310 Identities=13% Similarity=0.085 Sum_probs=185.9
Q ss_pred eCCEEEEEcCCCcEEEEECCCCeEeEEEeecCCc----------e-EEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEE
Q psy12614 80 FNDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGT----------C-WCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYE 148 (708)
Q Consensus 80 ~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~----------v-~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~ 148 (708)
.++.+++++.++.|..+|..+|+.+..+...... + ..+++ ++..+++++.|+.|..+|..+|+.+..
T Consensus 69 ~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~v~v~~~dg~l~AlDa~TG~~~W~ 146 (689)
T 1yiq_A 69 VDGVMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAV--WKGKVYVGVLDGRLEAIDAKTGQRAWS 146 (689)
T ss_dssp ETTEEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEE
T ss_pred ECCEEEEEcCCCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEE--ECCEEEEEccCCEEEEEECCCCCEeee
Confidence 3888899999999999999999999888643321 0 11222 356788889999999999999998865
Q ss_pred EecccccccEEEEEECC---CCCEEEEec------CC-eEEEEEcCCCceEEEEEecccC-C--C---------------
Q psy12614 149 KLLDRQQGRILCTAWHS---SGDYLVTGC------AA-AVRVWDIHKGHAIHKMSLDKSS-K--F--------------- 200 (708)
Q Consensus 149 ~~~~~~~~~v~~~~~s~---d~~~l~~~~------~d-~i~iwd~~~~~~~~~~~~~~~~-~--~--------------- 200 (708)
.....+......+..+| ++. ++.++ .+ .|..||..+|+.+.++...... . +
T Consensus 147 ~~~~~~~~~~~~~~~sP~v~~g~-v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~ 225 (689)
T 1yiq_A 147 VDTRADHKRSYTITGAPRVVNGK-VVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGD 225 (689)
T ss_dssp EECCSCTTSCCBCCSCCEEETTE-EEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSS
T ss_pred ecCcCCCCCCccccCCcEEECCE-EEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCc
Confidence 54430111111111122 444 44443 25 8999999999999887632100 0 0
Q ss_pred ------CCceeEEEEEEccCC-EEEEEcCCC-------------------cEEEEeCCCCeeEEEeec--cc-------c
Q psy12614 201 ------SKNTAVWCVAFCADF-TIITGDSGG-------------------FVRFWDGKTGVQWSDVKT--HK-------K 245 (708)
Q Consensus 201 ------~~~~~v~~~~~~~~~-~l~~~~~dg-------------------~i~~wd~~~~~~~~~~~~--~~-------~ 245 (708)
........+++.|++ .++.+..++ .|..+|.++|+.+-.+.. |. .
T Consensus 226 ~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~ 305 (689)
T 1yiq_A 226 AYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQ 305 (689)
T ss_dssp THHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCS
T ss_pred eeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCC
Confidence 000011256788765 577777765 399999999999877654 21 1
Q ss_pred CeEEEEEeCCCC---EEEEEecCCeEEEEEccCCcccccCCCCCC-----CCcceEEeEE------E---------eccc
Q psy12614 246 DILALTVSEDEN---YLYCAGVDPTVVCFQRTRKPQVCSTSGPEQ-----GSSVWVRSVN------R---------VIHE 302 (708)
Q Consensus 246 ~i~~~~~s~~~~---~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~-----~~~~~~~~~~------~---------~~~~ 302 (708)
.........+|+ .++.++.+|.++++|..+ |+.. ....|..... . ....
T Consensus 306 ~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~t--------G~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~ 377 (689)
T 1yiq_A 306 HMILAELPIDGKPRKVLMQAPKNGFFYVIDRAT--------GELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGK 377 (689)
T ss_dssp CEEEEEEEETTEEEEEEEECCTTSEEEEEETTT--------CCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSS
T ss_pred CcEEEeeccCCcEEEEEEEECCCCeEEEEECCC--------CCEeccccccccccccccCccCCCcccchhhccccCCCC
Confidence 222222333564 788899999999999998 6510 0001111000 0 0000
Q ss_pred -----------cceEEEEEe--CCEEEEEcC---------------------------------------------CCeE
Q psy12614 303 -----------GDVKSLALH--GNRLYSGGL---------------------------------------------DSYL 324 (708)
Q Consensus 303 -----------~~v~~l~~~--~~~l~s~~~---------------------------------------------d~~i 324 (708)
..-..++++ ..++++... +|.|
T Consensus 378 ~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l 457 (689)
T 1yiq_A 378 RNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKL 457 (689)
T ss_dssp CEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEE
T ss_pred eeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeE
Confidence 001124555 345544321 4789
Q ss_pred EEEeCCCCceeecCccCCCCceEEEEcCCcEEEEE-cCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCC
Q psy12614 325 SLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQ-YTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNN 403 (708)
Q Consensus 325 ~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~-~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (708)
..||+.++++.-............++..+.+++.+ .++.++.||..+++ .+.+...+..
T Consensus 458 ~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~--------------------~lw~~~~~~~ 517 (689)
T 1yiq_A 458 IAWDPVKQQAAWEVPYVTIFNGGTLSTAGNLVFEGSADGRVIAYAADTGE--------------------KLWEQPAASG 517 (689)
T ss_dssp EEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCC--------------------EEEEEECSSC
T ss_pred EEEECCCCCeEeEccCCCCccCccceECCCEEEEECCCCcEEEEECCCCc--------------------cceeeeCCCC
Confidence 99999988733222111222333566666666664 78999999999988 6777765544
Q ss_pred CceEEEEeCCCCcEEEE
Q psy12614 404 ATIRCSVVSNDGKYVAY 420 (708)
Q Consensus 404 ~~i~~~~~s~~g~~l~~ 420 (708)
.....+.|+.+|+..++
T Consensus 518 ~~~~p~ty~~~G~qyv~ 534 (689)
T 1yiq_A 518 VMAAPVTYSVDGEQYVT 534 (689)
T ss_dssp CCSCCEEEEETTEEEEE
T ss_pred cccCceEEEECCEEEEE
Confidence 33344667778875543
|
| >2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413} | Back alignment and structure |
|---|
Probab=99.23 E-value=1.2e-09 Score=108.17 Aligned_cols=231 Identities=6% Similarity=-0.024 Sum_probs=152.5
Q ss_pred CcEEEEEEcCCCCEEEEEe--CCCcEEEEeCCCCCeEEEEEe-------cCCCCCcEEEEEEe-CCEEEEEcC------C
Q psy12614 27 KVINCIACEPKSSRLAVSR--ADQSIEIWDISETPHVDRVFI-------GDPLSNSIECLTWF-NDRLFSGGL------Q 90 (708)
Q Consensus 27 ~~v~~~~~s~~~~~la~~~--~dg~v~iwd~~~~~~~~~~~~-------~h~~~~~v~~l~~~-~~~l~s~~~------d 90 (708)
..+..++++|+|+++++.. .++.+.||.+.+++.. .+. ++. ..+.+++++ ...|..+.. +
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~~--~~p~~~~~~~~~~--~~p~gv~~d~~g~L~v~D~g~~~~~~ 92 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGLI--PFPPQSGNAIITF--DTVLGIKSDGNGIVWMLDNGNQSKSV 92 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEEE--ESCCCCSSCCCCC--SCEEEEEECSSSEEEEEECHHHHTSC
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCee--cCCCcccCcccce--eEeeEEEEcCCCcEEEEcCCCCcCCC
Confidence 6799999999999888863 2343566665555432 222 234 689999999 455555442 5
Q ss_pred CcEEEEECCCCeEeEEEeec------CCceEEEEEecCCCEE-EEEe---CCCcEEEEEccCCcEEEEEecccc------
Q psy12614 91 GFVNEYDMRRLNIKSSTAVT------SGTCWCLSVHKKKRLL-AAGT---EQGHINLFQISDEGLLYEKLLDRQ------ 154 (708)
Q Consensus 91 ~~i~vwd~~~~~~~~~~~~~------~~~v~~~~~s~~~~~l-a~~~---~d~~i~iwd~~~~~~~~~~~~~~~------ 154 (708)
+.|.+||+.+++.+..+... ...+..+++++++..+ ++.. .++.|.+||..+++.. +.+.+|
T Consensus 93 ~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~--r~~~~~~~~~~~ 170 (343)
T 2qe8_A 93 PKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAA--RVLQGYPGIAPE 170 (343)
T ss_dssp CEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEE--EECTTCTTTSCC
T ss_pred CeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEE--EEecCCCccccc
Confidence 79999999999977776532 2356899999875554 4444 5789999999888764 333221
Q ss_pred -----------------------cccEEEEEECCCCCEEEEecCC--eEEEEEcC---CCce--------EEEEEecccC
Q psy12614 155 -----------------------QGRILCTAWHSSGDYLVTGCAA--AVRVWDIH---KGHA--------IHKMSLDKSS 198 (708)
Q Consensus 155 -----------------------~~~v~~~~~s~d~~~l~~~~~d--~i~iwd~~---~~~~--------~~~~~~~~~~ 198 (708)
...+..++|+||++.|+.+... .+..++.. .+.. +... +
T Consensus 171 ~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--g--- 245 (343)
T 2qe8_A 171 DIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERY--S--- 245 (343)
T ss_dssp SCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEE--E---
T ss_pred ccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEec--c---
Confidence 0236889999999988887665 55555432 1110 0111 0
Q ss_pred CCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCeeEEEeec-cccCeEEEEEeCCCCEEEEEecCCeEEEE
Q psy12614 199 KFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDVKT-HKKDILALTVSEDENYLYCAGVDPTVVCF 271 (708)
Q Consensus 199 ~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~~~-~~~~i~~~~~s~~~~~l~~~~~dg~i~iw 271 (708)
+......++++++|. +++...++.|.+||.++++....... +.....+++|.++++++++....+.+.+|
T Consensus 246 ---~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~g~l~v~~~~~~~~~~f 317 (343)
T 2qe8_A 246 ---EKPICDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTDEKLSWTDSFNFGSDGYLYFDCNQLHHSAPL 317 (343)
T ss_dssp ---ECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEECGGGSCEEEEEECTTSCEEEEECCGGGSGGG
T ss_pred ---cCCCCceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEECCceecCCeeEECCCCcEEEEeCcccccccc
Confidence 022455789999997 56666788999999856764333322 24568899999999887777655444333
|
| >1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1 | Back alignment and structure |
|---|
Probab=99.21 E-value=8.5e-09 Score=111.22 Aligned_cols=237 Identities=14% Similarity=0.110 Sum_probs=163.5
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCCeEEEEEecC-CC--CCcEEE-EEEeCCEEEEEcC------CCcEEEEECCCCeEeEE
Q psy12614 37 KSSRLAVSRADQSIEIWDISETPHVDRVFIGD-PL--SNSIEC-LTWFNDRLFSGGL------QGFVNEYDMRRLNIKSS 106 (708)
Q Consensus 37 ~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h-~~--~~~v~~-l~~~~~~l~s~~~------d~~i~vwd~~~~~~~~~ 106 (708)
++..|++++.|+.|..+|..+|+.+- .+..+ .. ...+.+ ....++.+++++. ++.|..+|..+|+.+..
T Consensus 127 ~~~~v~v~~~dg~l~alD~~tG~~~W-~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~ 205 (677)
T 1kb0_A 127 WKGKVYVGAWDGRLIALDAATGKEVW-HQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWR 205 (677)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEE-EEETTTTCCSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEE
T ss_pred ECCEEEEEcCCCEEEEEECCCCCEEe-eecCCcCcCcCcccccCcEEECCEEEEEecccccCCCCEEEEEECCCCcEEEE
Confidence 35678888899999999999999876 44433 10 011221 1223667776654 79999999999999887
Q ss_pred EeecCCc--------------------------------eEEEEEecCCCEEEEEeCCC-------------------cE
Q psy12614 107 TAVTSGT--------------------------------CWCLSVHKKKRLLAAGTEQG-------------------HI 135 (708)
Q Consensus 107 ~~~~~~~--------------------------------v~~~~~s~~~~~la~~~~d~-------------------~i 135 (708)
+...... ...++++|++.++++++.++ .|
T Consensus 206 ~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv 285 (677)
T 1kb0_A 206 WFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASI 285 (677)
T ss_dssp EESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEE
T ss_pred eccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEE
Confidence 7642211 13578999999998887654 59
Q ss_pred EEEEccCCcEEEEEeccccc-------ccEEEEEECCCC---CEEEEecCC-eEEEEEcCCCceEEEEEecccCC---C-
Q psy12614 136 NLFQISDEGLLYEKLLDRQQ-------GRILCTAWHSSG---DYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSK---F- 200 (708)
Q Consensus 136 ~iwd~~~~~~~~~~~~~~~~-------~~v~~~~~s~d~---~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~---~- 200 (708)
..+|..+|+.........|. .....+....+| ..++.++.+ .+.++|..+|+.+.........- +
T Consensus 286 ~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d 365 (677)
T 1kb0_A 286 VALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYD 365 (677)
T ss_dssp EEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEC
T ss_pred EEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccC
Confidence 99999999998665554442 122223333477 678888888 99999999999988876432000 0
Q ss_pred CCceeE------------------------EEEEEccCC-EEEEEcC---------------------------------
Q psy12614 201 SKNTAV------------------------WCVAFCADF-TIITGDS--------------------------------- 222 (708)
Q Consensus 201 ~~~~~v------------------------~~~~~~~~~-~l~~~~~--------------------------------- 222 (708)
....++ ..++|+|++ .+++...
T Consensus 366 ~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~ 445 (677)
T 1kb0_A 366 KHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKF 445 (677)
T ss_dssp TTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEE
T ss_pred CCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccccc
Confidence 000011 146888876 4444321
Q ss_pred ----------CCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccC
Q psy12614 223 ----------GGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTR 275 (708)
Q Consensus 223 ----------dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~ 275 (708)
.|.|..||+.+++.+..+. +...+....+..++.+++.++.||.+++||..+
T Consensus 446 ~~~~~~~~~~~g~l~A~D~~tG~~~W~~~-~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~t 507 (677)
T 1kb0_A 446 FNAEPPKSKPFGRLLAWDPVAQKAAWSVE-HVSPWNGGTLTTAGNVVFQGTADGRLVAYHAAT 507 (677)
T ss_dssp ECSSCCCSCCEEEEEEEETTTTEEEEEEE-ESSSCCCCEEEETTTEEEEECTTSEEEEEETTT
T ss_pred cccccCCCCCccEEEEEeCCCCcEEeecC-CCCCCcCcceEeCCCEEEEECCCCcEEEEECCC
Confidence 2789999999999888876 334455556777888999999999999999999
|
| >3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A* | Back alignment and structure |
|---|
Probab=99.20 E-value=1.8e-09 Score=117.72 Aligned_cols=238 Identities=12% Similarity=0.064 Sum_probs=152.9
Q ss_pred CcEEEEEEe--CCEEEEE-----cCCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCC-----------
Q psy12614 72 NSIECLTWF--NDRLFSG-----GLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQG----------- 133 (708)
Q Consensus 72 ~~v~~l~~~--~~~l~s~-----~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~----------- 133 (708)
..+..++|| |++||-+ +...+|++||+++++.+... .+......++|+ |++.|+.++.+.
T Consensus 129 ~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~-~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~ 206 (693)
T 3iuj_A 129 TALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETP-LKDVKFSGISWL-GNEGFFYSSYDKPDGSELSARTD 206 (693)
T ss_dssp CEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEE-EEEEESCCCEEE-TTTEEEEEESSCCC-------CC
T ss_pred EEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccc-cCCceeccEEEe-CCCEEEEEEecCcccccccccCC
Confidence 578899999 8877733 23357999999999865431 111123578999 999999988774
Q ss_pred --cEEEEEccCCcE--EEEEeccc-ccccEEEEEECCCCCEEEEec----CC-eEEEEEcCCCc-eEEEEEecccCCCCC
Q psy12614 134 --HINLFQISDEGL--LYEKLLDR-QQGRILCTAWHSSGDYLVTGC----AA-AVRVWDIHKGH-AIHKMSLDKSSKFSK 202 (708)
Q Consensus 134 --~i~iwd~~~~~~--~~~~~~~~-~~~~v~~~~~s~d~~~l~~~~----~d-~i~iwd~~~~~-~~~~~~~~~~~~~~~ 202 (708)
.|++|++.++.. ........ +...+..+.|+|||++|+... .. .|.++|+.++. ....+...
T Consensus 207 ~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~------- 279 (693)
T 3iuj_A 207 QHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGD------- 279 (693)
T ss_dssp CCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECS-------
T ss_pred CcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCC-------
Confidence 399999987642 21133333 455678999999999886433 23 79999998764 34444433
Q ss_pred ceeEEEEEEccCC-EE-EEEcCC---CcEEEEeCCCCee--EEEeeccccCeEEEEEeCCCCEEEEEecCC---eEEEEE
Q psy12614 203 NTAVWCVAFCADF-TI-ITGDSG---GFVRFWDGKTGVQ--WSDVKTHKKDILALTVSEDENYLYCAGVDP---TVVCFQ 272 (708)
Q Consensus 203 ~~~v~~~~~~~~~-~l-~~~~~d---g~i~~wd~~~~~~--~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg---~i~iw~ 272 (708)
....... ++++| ++ +....+ +.|..+|+.++.. ...+..|...+. .|+++++.|+....++ .|++|+
T Consensus 280 ~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~d 356 (693)
T 3iuj_A 280 LDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDATARVEQFD 356 (693)
T ss_dssp SSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETTEEEEEEEC
T ss_pred CCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEEECCeeEEEEEE
Confidence 2223333 45555 54 444443 6799999987654 345555666665 8999998888766544 688888
Q ss_pred ccCCcccccCCCCCCCCcceEEeEEEe-ccccceEEEEEe--CCEEEEEcCC----CeEEEEeCCCCceeecC
Q psy12614 273 RTRKPQVCSTSGPEQGSSVWVRSVNRV-IHEGDVKSLALH--GNRLYSGGLD----SYLSLSYYPPKTLVKYP 338 (708)
Q Consensus 273 ~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~v~~l~~~--~~~l~s~~~d----~~i~iw~~~~~~~~~~~ 338 (708)
+.. +. ...+. ...+.+..+.++ ++.++....+ +.+..||+.++....+.
T Consensus 357 ~~g--------~~---------~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~~~l~ 412 (693)
T 3iuj_A 357 YEG--------KR---------VREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGAISLYR 412 (693)
T ss_dssp TTS--------CE---------EEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCCEEEEE
T ss_pred CCC--------Ce---------eEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCeEEEEE
Confidence 876 32 22222 233455666665 4444444333 78999999877644433
|
| >2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.17 E-value=1.4e-11 Score=122.91 Aligned_cols=199 Identities=10% Similarity=0.009 Sum_probs=117.0
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECCCCeEeEEEeecCC-c
Q psy12614 37 KSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSG-T 113 (708)
Q Consensus 37 ~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~-~ 113 (708)
++.+|++++.||.|..||..+|+.+- .+.. . .+.+..+. +..+++++.||.|+.||.++|+.+..+..+.. .
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W-~~~~-~---~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~ 82 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKW-TLKE-D---PVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPEL 82 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEE-EEEC-C---CSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHH
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEE-EecC-C---CceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCccc
Confidence 57889999999999999999999875 4443 2 22233333 66777788999999999999988766653321 1
Q ss_pred eE-EEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEE
Q psy12614 114 CW-CLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHK 191 (708)
Q Consensus 114 v~-~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~ 191 (708)
+. +..+. ++..+++++.++.|+.||..+|+... .+..+. ...++|++..+++++.+ .|..||..+|+.+..
T Consensus 83 ~~~sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w--~~~~~~----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~ 155 (369)
T 2hz6_A 83 VQASPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQ--TLSSAF----ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWN 155 (369)
T ss_dssp HTTCSCC------CCCCEEEEEEEEECCC----------------------------EEEEEEEEEEECCCSSSSSCCCE
T ss_pred cccCceEe-cCCEEEEEeCCCEEEEEECCCCcEEE--EecCCC----cccccccCCEEEEEecCCEEEEEECCCCCEEEe
Confidence 11 11111 34567788889999999999998863 333322 23456788899999988 999999999998776
Q ss_pred EEecccCCCCCceeEEEEEEccC----CEEEEEcCCCcEEEEeCCCCeeEEEeeccccCeE-EEEEeCCCC
Q psy12614 192 MSLDKSSKFSKNTAVWCVAFCAD----FTIITGDSGGFVRFWDGKTGVQWSDVKTHKKDIL-ALTVSEDEN 257 (708)
Q Consensus 192 ~~~~~~~~~~~~~~v~~~~~~~~----~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~-~~~~s~~~~ 257 (708)
+... .....++.++ +.+++++.+|.|..||..+|+.+..... ..++. ...+++++.
T Consensus 156 ~~~~---------~~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~-~~pv~~~~~~~~dg~ 216 (369)
T 2hz6_A 156 ATYF---------DYAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQNY-ASPVVAFYVWQREGL 216 (369)
T ss_dssp EEEE---------EECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEEC-SSCEEEEEECTTSSC
T ss_pred Eecc---------cccCccccCCccccceEEEECCCCEEEEEECCCCcEEEEecC-CCceEEEEEecCCce
Confidence 6532 1122333332 5688889999999999999998877663 33443 344455553
|
| >2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413} | Back alignment and structure |
|---|
Probab=99.17 E-value=6.9e-09 Score=102.58 Aligned_cols=239 Identities=10% Similarity=0.062 Sum_probs=153.6
Q ss_pred CceEEEEEecCCCEEEEEeC--CCcEEEEEccCCcEEEEEecc-------cccccEEEEEECCCCCEEEEecC-----C-
Q psy12614 112 GTCWCLSVHKKKRLLAAGTE--QGHINLFQISDEGLLYEKLLD-------RQQGRILCTAWHSSGDYLVTGCA-----A- 176 (708)
Q Consensus 112 ~~v~~~~~s~~~~~la~~~~--d~~i~iwd~~~~~~~~~~~~~-------~~~~~v~~~~~s~d~~~l~~~~~-----d- 176 (708)
..+..++++++|+.+++... ++.++||.+.++++. .+. .+-..+..++++++++++++-.. +
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~~---~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~ 93 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGLI---PFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVP 93 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEEE---ESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCC
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCee---cCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCC
Confidence 67899999999998887542 343556665555542 221 24467999999999986665543 4
Q ss_pred eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccC-CEE-EEEc---CCCcEEEEeCCCCeeEEEeeccc-------
Q psy12614 177 AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCAD-FTI-ITGD---SGGFVRFWDGKTGVQWSDVKTHK------- 244 (708)
Q Consensus 177 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l-~~~~---~dg~i~~wd~~~~~~~~~~~~~~------- 244 (708)
.|.+||+.+++.+..+....... .+...+..+++.++ +.+ ++-. .++.|.+||+.+++..+.+.+|.
T Consensus 94 ~i~~~d~~tg~~~~~~~~~~~~~-~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~ 172 (343)
T 2qe8_A 94 KLVAWDTLNNQLSRVIYLPPPIT-LSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDI 172 (343)
T ss_dssp EEEEEETTTTEEEEEEECCTTTS-CTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSC
T ss_pred eEEEEECCCCeEEEEEECChhhc-ccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCccccccc
Confidence 99999999999887776532111 11345688999975 564 4544 57899999998887766554321
Q ss_pred ----------------------cCeEEEEEeCCCCEEEEEecCC-eEEEEEccCCcccccCCCCCCCCcceEEeEEEecc
Q psy12614 245 ----------------------KDILALTVSEDENYLYCAGVDP-TVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIH 301 (708)
Q Consensus 245 ----------------------~~i~~~~~s~~~~~l~~~~~dg-~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 301 (708)
..+..++++||++.|+.+..++ .+..++... ...+. .............++
T Consensus 173 ~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~-----~~~~~-~~~~~~~~~~~~~g~ 246 (343)
T 2qe8_A 173 DLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSAD-----LSNLQ-LTDAELGSKIERYSE 246 (343)
T ss_dssp CCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHH-----HTCTT-CCHHHHHTTCEEEEE
T ss_pred ceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHH-----hcCCC-CChhhhhcceEeccc
Confidence 2357899999999999887766 454454321 00000 000000000011233
Q ss_pred ccceEEEEEe--CCEEEEEcCCCeEEEEeCCCCceeecC-cc-CCCCceEEEEcCCcEEEEEc
Q psy12614 302 EGDVKSLALH--GNRLYSGGLDSYLSLSYYPPKTLVKYP-CT-LAQSTPVSLAKDIQHVLLQY 360 (708)
Q Consensus 302 ~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~~~~~~~~-~~-~~~~~~~~~s~~~~~l~~~~ 360 (708)
......++++ +.++++...++.|.+|+..++.+..+. .+ ...+..++++++++++++..
T Consensus 247 ~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~g~l~v~~~ 309 (343)
T 2qe8_A 247 KPICDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTDEKLSWTDSFNFGSDGYLYFDCN 309 (343)
T ss_dssp CCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEECGGGSCEEEEEECTTSCEEEEEC
T ss_pred CCCCceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEECCceecCCeeEECCCCcEEEEeC
Confidence 4456678887 888888888999999999444433332 12 44567899999988777753
|
| >2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A* | Back alignment and structure |
|---|
Probab=99.16 E-value=4.5e-08 Score=90.30 Aligned_cols=213 Identities=11% Similarity=0.048 Sum_probs=146.9
Q ss_pred eeeeeeeeccCCC--CcEEEEEEcCCCCEEEEEeC--CCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEeCCEEEEE-c
Q psy12614 14 YGVHNIKFYAPEP--KVINCIACEPKSSRLAVSRA--DQSIEIWDISETPHVDRVFIGDPLSNSIECLTWFNDRLFSG-G 88 (708)
Q Consensus 14 ~~~~~~~~~~~h~--~~v~~~~~s~~~~~la~~~~--dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~~~~l~s~-~ 88 (708)
+..+-++.+ .|. .....++|+||+.+.++.+. ++.|.+.|+.+++.+.....+.. .....+++.++.|+.+ -
T Consensus 7 ~~~~vv~~~-p~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~--~fgeGi~~~g~~lyv~t~ 83 (266)
T 2iwa_A 7 YIVEVLNEF-PHDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDS--YFGEGLTLLNEKLYQVVW 83 (266)
T ss_dssp EEEEEEEEE-ECCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTT--CCEEEEEEETTEEEEEET
T ss_pred cCceEEEEE-ECCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCC--cceEEEEEeCCEEEEEEe
Confidence 334444444 344 34689999998754444332 57999999999998874333332 3445778886666554 5
Q ss_pred CCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEeccccc---ccEEEEEECC
Q psy12614 89 LQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQ---GRILCTAWHS 165 (708)
Q Consensus 89 ~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~---~~v~~~~~s~ 165 (708)
.++.+.++|..+++.+.++..... ....+++||+.|+++..++.|.++|..+.+........... .....+.|.
T Consensus 84 ~~~~v~viD~~t~~v~~~i~~g~~--~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~- 160 (266)
T 2iwa_A 84 LKNIGFIYDRRTLSNIKNFTHQMK--DGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI- 160 (266)
T ss_dssp TCSEEEEEETTTTEEEEEEECCSS--SCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-
T ss_pred cCCEEEEEECCCCcEEEEEECCCC--CeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-
Confidence 689999999999999988863311 12456778888888777899999999998876333332222 236678888
Q ss_pred CCCEEEEecCC-eEEEEEcCCCceEEEEEecc-------cCCCCCceeEEEEEEccCC-E-EEEEcCCCcEEEEeCCC
Q psy12614 166 SGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDK-------SSKFSKNTAVWCVAFCADF-T-IITGDSGGFVRFWDGKT 233 (708)
Q Consensus 166 d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~-------~~~~~~~~~v~~~~~~~~~-~-l~~~~~dg~i~~wd~~~ 233 (708)
++...+....+ .|.+.|..+++.+..+.... ... ........++|+|++ + ++++...+.+.+.++..
T Consensus 161 dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~-~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~ 237 (266)
T 2iwa_A 161 NGEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGF-RDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHL 237 (266)
T ss_dssp TTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTC-TTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEE
T ss_pred CCEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccc-cccCceEEEEEcCCCCEEEEECCCCCeEEEEEEec
Confidence 67544444445 99999999999999998641 000 112467899999998 4 77787888998888754
|
| >2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=99.16 E-value=1.2e-07 Score=93.13 Aligned_cols=224 Identities=12% Similarity=0.073 Sum_probs=141.6
Q ss_pred CCCCEEEEecCC--eEEEEEcCCC----ceEEEEEecccC-CCCCceeEEEEEEccCCEEEEEcCC------CcEEEEeC
Q psy12614 165 SSGDYLVTGCAA--AVRVWDIHKG----HAIHKMSLDKSS-KFSKNTAVWCVAFCADFTIITGDSG------GFVRFWDG 231 (708)
Q Consensus 165 ~d~~~l~~~~~d--~i~iwd~~~~----~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~l~~~~~d------g~i~~wd~ 231 (708)
++.++|+..+.. .|.++|+.+. +....+....-. . ........+..+|+|-++++..+ |.|.++|.
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~-~g~s~Ph~~~~~pdGi~Vs~~g~~~g~~~g~v~vlD~ 171 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKV-SGYSRLHTVHCGPDAIYISALGNEEGEGPGGILMLDH 171 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHH-HCEEEEEEEEECSSCEEEEEEEETTSCSCCEEEEECT
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccc-cCCCcccceeECCCeEEEEcCCCcCCCCCCeEEEEEC
Confidence 888888876655 9999998755 455555200000 0 00234567888999954444333 78999999
Q ss_pred CCCeeEEEeecccc---CeEEEEEeCCCCEEEEEe-------------------cCCeEEEEEccCCcccccCCCCCCCC
Q psy12614 232 KTGVQWSDVKTHKK---DILALTVSEDENYLYCAG-------------------VDPTVVCFQRTRKPQVCSTSGPEQGS 289 (708)
Q Consensus 232 ~~~~~~~~~~~~~~---~i~~~~~s~~~~~l~~~~-------------------~dg~i~iw~~~~~~~~~~~~g~~~~~ 289 (708)
++++.+.++..... .-..+.|+|+++.+++.. ....|.+||+.+ ++
T Consensus 172 ~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~--------~k---- 239 (462)
T 2ece_A 172 YSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRK--------RK---- 239 (462)
T ss_dssp TTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTT--------TE----
T ss_pred CCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCC--------Cc----
Confidence 99999998863222 223578899999888874 367999999987 43
Q ss_pred cceEEeEEEec--cccceEEEEE--e--CCEEEEEc------CCCeEEEEeCCCCceee-----cC-----c-----c--
Q psy12614 290 SVWVRSVNRVI--HEGDVKSLAL--H--GNRLYSGG------LDSYLSLSYYPPKTLVK-----YP-----C-----T-- 340 (708)
Q Consensus 290 ~~~~~~~~~~~--~~~~v~~l~~--~--~~~l~s~~------~d~~i~iw~~~~~~~~~-----~~-----~-----~-- 340 (708)
....+.. .......+.| + +.+++.++ .+++|.+|..+.+.+.. +. . +
T Consensus 240 ----~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~ 315 (462)
T 2ece_A 240 ----RIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKP 315 (462)
T ss_dssp ----EEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGG
T ss_pred ----EeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccc
Confidence 2333332 1123455555 5 66666555 56678766554432100 00 0 0
Q ss_pred ----CCCCceEEEEcCCcEEEEE--cCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCC-----------
Q psy12614 341 ----LAQSTPVSLAKDIQHVLLQ--YTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNN----------- 403 (708)
Q Consensus 341 ----~~~~~~~~~s~~~~~l~~~--~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------- 403 (708)
......+.+|+||++|.++ ..+.|.+|++.... .+..+..+..+..
T Consensus 316 f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~-----------------~~~lv~~I~tGG~~~~~~~~~G~~ 378 (462)
T 2ece_A 316 FKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPF-----------------KPVLTGKVKLGGIFHRADHPAGHK 378 (462)
T ss_dssp GTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTT-----------------SCEEEEEEECBTTTTCBCCTTSCC
T ss_pred cccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCC-----------------CcEEEEEEEeCCeecccccccccc
Confidence 1345779999999999886 56789999986432 1223333433311
Q ss_pred --CceEEEEeCCCCcEEEEEc
Q psy12614 404 --ATIRCSVVSNDGKYVAYST 422 (708)
Q Consensus 404 --~~i~~~~~s~~g~~l~~~~ 422 (708)
.....++++|||++|++++
T Consensus 379 ~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 379 LTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp CCSCCCCEEECTTSSEEEEEC
T ss_pred CCCCCCEEEEcCCCCEEEEEc
Confidence 1357889999999999865
|
| >1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1 | Back alignment and structure |
|---|
Probab=99.15 E-value=1e-07 Score=102.66 Aligned_cols=300 Identities=12% Similarity=0.142 Sum_probs=189.5
Q ss_pred CCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCC---------c-EEEEEEeCCEEEEEcCCCcEEEEECCCCeEeEEE
Q psy12614 38 SSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSN---------S-IECLTWFNDRLFSGGLQGFVNEYDMRRLNIKSST 107 (708)
Q Consensus 38 ~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~---------~-v~~l~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~ 107 (708)
+..|.+++.++.|.-+|..+|+.+= .+.... .. . -..+++.++.++.++.|+.|..+|..+|+.+..+
T Consensus 66 ~g~vyv~~~~~~v~AlD~~tG~~~W-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~l~alD~~tG~~~W~~ 143 (668)
T 1kv9_A 66 DGVIYTSMSWSRVIAVDAASGKELW-RYDPEV-AKVKARTSCCDAVNRGVALWGDKVYVGTLDGRLIALDAKTGKAIWSQ 143 (668)
T ss_dssp TTEEEEEEGGGEEEEEETTTCCEEE-EECCCC-CGGGGGGCTTCSCCCCCEEEBTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCEEEEECCCCeEEEEECCCChhce-EECCCC-CccccccccccCCccceEEECCEEEEEcCCCEEEEEECCCCCEeeee
Confidence 5677778888999999999999865 333221 00 0 1234455788999999999999999999998887
Q ss_pred eecC----CceEE-EEEecCCCEEEEEeC------CCcEEEEEccCCcEEEEEecccc-c--------------------
Q psy12614 108 AVTS----GTCWC-LSVHKKKRLLAAGTE------QGHINLFQISDEGLLYEKLLDRQ-Q-------------------- 155 (708)
Q Consensus 108 ~~~~----~~v~~-~~~s~~~~~la~~~~------d~~i~iwd~~~~~~~~~~~~~~~-~-------------------- 155 (708)
.... ..+.+ ..+ .++ .++++.. ++.|..+|..+|+.+........ .
T Consensus 144 ~~~~~~~~~~~~~~P~v-~~~-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~ 221 (668)
T 1kv9_A 144 QTTDPAKPYSITGAPRV-VKG-KVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQ 221 (668)
T ss_dssp ECSCTTSSCBCCSCCEE-ETT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSC
T ss_pred ccCCCCCcceecCCCEE-ECC-EEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCccc
Confidence 6421 11111 111 133 5555543 58999999999998865443211 0
Q ss_pred --------ccEEEEEECCCCCEEEEecCC-e-------------------EEEEEcCCCceEEEEEecccCC--CCCcee
Q psy12614 156 --------GRILCTAWHSSGDYLVTGCAA-A-------------------VRVWDIHKGHAIHKMSLDKSSK--FSKNTA 205 (708)
Q Consensus 156 --------~~v~~~~~s~d~~~l~~~~~d-~-------------------i~iwd~~~~~~~~~~~~~~~~~--~~~~~~ 205 (708)
.....+++.|+...++.++.+ . |..+|..+|+.+..+....... +....+
T Consensus 222 ~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~ 301 (668)
T 1kv9_A 222 YWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQ 301 (668)
T ss_dssp HHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSC
T ss_pred eeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCC
Confidence 011246888888888887765 4 9999999999998887642100 000122
Q ss_pred EEEEEEccCCE----EEEEcCCCcEEEEeCCCCeeEEEeecccc------------C-----------------------
Q psy12614 206 VWCVAFCADFT----IITGDSGGFVRFWDGKTGVQWSDVKTHKK------------D----------------------- 246 (708)
Q Consensus 206 v~~~~~~~~~~----l~~~~~dg~i~~wd~~~~~~~~~~~~~~~------------~----------------------- 246 (708)
.....+..+|+ ++.++.+|.++++|..+|+.+...+.... +
T Consensus 302 ~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~ 381 (668)
T 1kv9_A 302 ITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAH 381 (668)
T ss_dssp EEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSS
T ss_pred cEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccccccccCCccccccccccCCeeEECCCCcccc
Confidence 22223334663 78889999999999999998754332110 0
Q ss_pred -eEEEEEeCCCCEEEEEe------------------------------------cCCeEEEEEccCCcccccCCCCCCCC
Q psy12614 247 -ILALTVSEDENYLYCAG------------------------------------VDPTVVCFQRTRKPQVCSTSGPEQGS 289 (708)
Q Consensus 247 -i~~~~~s~~~~~l~~~~------------------------------------~dg~i~iw~~~~~~~~~~~~g~~~~~ 289 (708)
-..++++|+..+++... .+|.|..||+.+ |+
T Consensus 382 ~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~t--------G~---- 449 (668)
T 1kv9_A 382 NWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVK--------QK---- 449 (668)
T ss_dssp CSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTT--------TE----
T ss_pred CCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCC--------Cc----
Confidence 01267888877776522 237788999988 65
Q ss_pred cceEEeEEEeccccceE--EEEEeCCEEEEEcCCCeEEEEeCCCCc-eeecCcc-CCCCceEEEEcCCcEEEE
Q psy12614 290 SVWVRSVNRVIHEGDVK--SLALHGNRLYSGGLDSYLSLSYYPPKT-LVKYPCT-LAQSTPVSLAKDIQHVLL 358 (708)
Q Consensus 290 ~~~~~~~~~~~~~~~v~--~l~~~~~~l~s~~~d~~i~iw~~~~~~-~~~~~~~-~~~~~~~~~s~~~~~l~~ 358 (708)
..|. ...+ .... .+...+.+++.++.|+.++.||..++. +.++..+ ......+.+..+|+..++
T Consensus 450 ~~W~----~~~~-~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l~~~~~~~~~~~~p~~~~~~G~~yva 517 (668)
T 1kv9_A 450 AAWK----VPYP-THWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEAQSGIVAAPMTFELAGRQYVA 517 (668)
T ss_dssp EEEE----EEES-SSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEE
T ss_pred EEEE----ccCC-CCCcCceeEeCCCEEEEECCcccchhhhhhcChhheEecCCCCcccCceEEEECCEEEEE
Confidence 3332 2222 2222 233348899999999999999999877 3333311 122345666677775443
|
| >4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A* | Back alignment and structure |
|---|
Probab=99.12 E-value=2.1e-05 Score=83.45 Aligned_cols=510 Identities=11% Similarity=0.020 Sum_probs=271.5
Q ss_pred CEEEEEeCCCcEEEEeCCCCCeEEEEEe-cCCCCCcEEEEEEe--CCEEE-EEcCCCcEEEEECCCCeEeEEEeecCCce
Q psy12614 39 SRLAVSRADQSIEIWDISETPHVDRVFI-GDPLSNSIECLTWF--NDRLF-SGGLQGFVNEYDMRRLNIKSSTAVTSGTC 114 (708)
Q Consensus 39 ~~la~~~~dg~v~iwd~~~~~~~~~~~~-~h~~~~~v~~l~~~--~~~l~-s~~~d~~i~vwd~~~~~~~~~~~~~~~~v 114 (708)
.+|+.+. .+.|+..++.+..... .+. ..- ..+.+|+|. ++.|+ +-..++.|..+++........+.......
T Consensus 7 ~~Ll~s~-~~~I~~i~l~~~~~~~-~~~~~~~--~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P 82 (628)
T 4a0p_A 7 AFLLFSR-RADIRRISLETNNNNV-AIPLTGV--KEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYP 82 (628)
T ss_dssp CEEEEEE-TTEEEEEESSCTTCEE-ECCCCSC--SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCC
T ss_pred cEEEEEe-CCcEEEEECCCCCcce-EEEcCCC--CceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCc
Confidence 3555554 4589999998765432 333 222 568899999 55555 44567899999987654433333323467
Q ss_pred EEEEEecCCCEEEEE-eCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEec-C-C-eEEEEEcCCCceEE
Q psy12614 115 WCLSVHKKKRLLAAG-TEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGC-A-A-AVRVWDIHKGHAIH 190 (708)
Q Consensus 115 ~~~~~s~~~~~la~~-~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~-~-d-~i~iwd~~~~~~~~ 190 (708)
..+++.+.+..|..+ ...+.|.+.++.+.... ..+...-.....+++.|....|+... . . .|...++.... ..
T Consensus 83 ~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~--~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~-~~ 159 (628)
T 4a0p_A 83 EGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQ--VLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSE-RT 159 (628)
T ss_dssp CEEEEETTTTEEEEEETTTTEEEEEETTSTTCE--EEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS-CE
T ss_pred ceEEEEeCCCEEEEEECCCCEEEEEecCCCcEE--EEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCc-eE
Confidence 789999876666554 44678999998766543 22223345578999998666666554 2 4 78888875433 33
Q ss_pred EEEecccCCCCCceeEEEEEEccCC-EEEEE-cCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEe-cCCe
Q psy12614 191 KMSLDKSSKFSKNTAVWCVAFCADF-TIITG-DSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAG-VDPT 267 (708)
Q Consensus 191 ~~~~~~~~~~~~~~~v~~~~~~~~~-~l~~~-~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-~dg~ 267 (708)
.+... -.....+++.+++ +|..+ ...+.|..+|+..... ..+.........+++.. + .|+.+. ..+.
T Consensus 160 ~l~~~-------~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~-~v~~~~l~~P~glav~~-~-~ly~tD~~~~~ 229 (628)
T 4a0p_A 160 TLVPN-------VGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR-EVIADDLPHPFGLTQYQ-D-YIYWTDWSRRS 229 (628)
T ss_dssp EEECS-------CSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEEECCSCEEEEEEET-T-EEEEEETTTTE
T ss_pred EEECC-------CCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce-EEeeccCCCceEEEEEC-C-EEEEecCCCCE
Confidence 33322 4567899999965 65544 4567899999865433 33433344556788765 3 455544 4688
Q ss_pred EEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--C-CEEEE-E----cCCCeEEEEeCCCC-ceeecC
Q psy12614 268 VVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--G-NRLYS-G----GLDSYLSLSYYPPK-TLVKYP 338 (708)
Q Consensus 268 i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~-~~l~s-~----~~d~~i~iw~~~~~-~~~~~~ 338 (708)
|...|..+ |+ ....+.........+... . ..-.- + +.-..+++-..... .+.-..
T Consensus 230 I~~~dk~t--------g~--------~~~~l~~~~~~p~~i~v~~~~~q~~~n~C~~~ng~C~~~C~~~~~~~~~C~C~~ 293 (628)
T 4a0p_A 230 IERANKTS--------GQ--------NRTIIQGHLDYVMDILVFHSSRQSGWNECASSNGHCSHLCLAVPVGGFVCGCPA 293 (628)
T ss_dssp EEEEETTT--------CC--------SCEEEECSCCSCCEEEEECGGGSCCCCTTTTTGGGCSSEEEEETTTEEEEECST
T ss_pred EEEEECCC--------CC--------ceEEEecCCCCcceeeeeeecccccceEeccCCCCcchhhhcCCCCCeeEEcCC
Confidence 88888776 43 111111111122222211 0 00000 0 00001111111000 000000
Q ss_pred ccCCCCceEEEEcCCcEEEEEcCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEE
Q psy12614 339 CTLAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYV 418 (708)
Q Consensus 339 ~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l 418 (708)
+.........+.+...+++.+....|+-..+.... .+ . ..+....-..+.+++|.+....|
T Consensus 294 g~~l~~d~~~C~~~~~~Ll~s~~~~i~~i~l~~~~-----------------~~-~-~~l~~~~~~~~~~ld~d~~~~~i 354 (628)
T 4a0p_A 294 HYSLNADNRTCSAPTTFLLFSQKSAINRMVIDEQQ-----------------SP-D-IILPIHSLRNVRAIDYDPLDKQL 354 (628)
T ss_dssp TCEECTTSSCEECCSSEEEEEETTEEEEECCCTTC-----------------CC-C-EECCCTTCSCEEEEEEETTTTEE
T ss_pred CcEecccCCcCccccceeeeeccceEEEEeccccc-----------------Cc-e-EEEEehhcCCceEEEEecCCCeE
Confidence 00000000011122345666666666655554321 00 0 11111233567889999877777
Q ss_pred EEEc--CCceEEEEEEecCCcceeEEeec-CCcccccceeEEEEEecCCCeEEEEecCCc-EEEecCCCeEEEEEecCCC
Q psy12614 419 AYST--ESCVRLHSLDLDGDKPQISRIKN-LPAPLFKSIFTHVLISADSTLLLAVSLNGP-LYIIDLSSLEIKYCVDPYK 494 (708)
Q Consensus 419 ~~~~--d~~i~i~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~~~s~d~~~l~~~~~dg~-i~~~~~~~~~~~~~~~~~~ 494 (708)
..++ .+.|+.++.+. .. ....+.. ..+......+..+++...++.|+.+..... |...+.. ++....+....
T Consensus 355 y~sD~~~~~I~r~~~~g--~~-~~~v~~~~~~~~~~~~~p~glAvD~~~~nLY~td~~~~~I~v~~~~-G~~~~~l~~~~ 430 (628)
T 4a0p_A 355 YWIDSRQNMIRKAQEDG--SQ-GFTVVVSSVPSQNLEIQPYDLSIDIYSRYIYWTCEATNVINVTRLD-GRSVGVVLKGE 430 (628)
T ss_dssp EEEETTTTEEEEEETTS--CS-CEEEEC--------CCCEEEEEEETTTTEEEEEETTTTEEEEEETT-SCEEEEEEECT
T ss_pred EEEecCcceEEEEEcCC--CC-ceEEEEcccccccccCCcceEEeeccCCeEEEEcCCCCEEEEEECC-CCeEEEEEeCC
Confidence 7765 55666554432 11 1111100 000000123455999998888876665444 4444332 23333332211
Q ss_pred CCccCcceEEEEECCCCcEEEEEe-cCC--eEEEEECC-ceee-ecCCCCCCceEEEEcCCCCEEEEEec-CCcEEEEEc
Q psy12614 495 SNLMSDVISLVQMSECKQYIVCAD-RKS--HVVIWKNG-QHHA-SLPRYRKPSTAMAIHPTLSTLVTVYS-DHRIVEFDL 568 (708)
Q Consensus 495 ~~~~~~~i~~~~~s~~~~~l~~~~-~d~--~i~iw~~~-~~~~-~~~~~~~~v~~l~~s~d~~~l~~~~~-dg~i~vwd~ 568 (708)
......+++.|...+|+..+ ... .|...+++ +... .....-..++.|++.++++.|..+.. .+.|...++
T Consensus 431 ----l~~Pr~iavdp~~g~ly~tD~g~~~~~I~r~~~dG~~~~~l~~~~l~~P~gla~D~~~~~LYw~D~~~~~I~~~~~ 506 (628)
T 4a0p_A 431 ----QDRPRAVVVNPEKGYMYFTNLQERSPKIERAALDGTEREVLFFSGLSKPIALALDSRLGKLFWADSDLRRIESSDL 506 (628)
T ss_dssp ----TCCEEEEEEETTTTEEEEEEEETTEEEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred ----CCceeeEEEecCCCeEEEeecCCCCCeEEEEeCCCCCcEEEEeccCCCccEEEEeCCCCEEEEEeCCCCEEEEEeC
Confidence 34678999999544444443 333 57777776 2222 22333456799999998888887765 578999999
Q ss_pred CCCCCCchhhhhhccCchhhh-cCCCCeeEEEeCCCCCceEEEEc-CeeEEEEecC
Q psy12614 569 NRKAFTTFSRKLETNHPNEWL-SRQLPVLGIEFDPQDSSLIYLMD-DSALCVINKN 622 (708)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~l~~s~~~~~l~~~~~-d~~i~~wd~~ 622 (708)
+..... .+. .......+|++.. ..|+.+.. ...|...|..
T Consensus 507 dG~~r~------------~~~~~~~~~P~glav~~--~~ly~tD~~~~~i~~~~k~ 548 (628)
T 4a0p_A 507 SGANRI------------VLEDSNILQPVGLTVFE--NWLYWIDKQQQMIEKIDMT 548 (628)
T ss_dssp TSCSCE------------EEECSSCSCEEEEEEET--TEEEEEETTTTEEEEEETT
T ss_pred CCCceE------------EEEcCCCCCcEEEEEEC--CEEEEEECCCCeEEEEECc
Confidence 764432 111 2233466777644 45555553 4566665554
|
| >3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A* | Back alignment and structure |
|---|
Probab=99.11 E-value=2.3e-05 Score=83.12 Aligned_cols=403 Identities=8% Similarity=0.007 Sum_probs=225.4
Q ss_pred CCCcEEEEEEcCCCCEEEEEe-CCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEE-EEcCCCcEEEEECCC
Q psy12614 25 EPKVINCIACEPKSSRLAVSR-ADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLF-SGGLQGFVNEYDMRR 100 (708)
Q Consensus 25 h~~~v~~~~~s~~~~~la~~~-~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~-s~~~d~~i~vwd~~~ 100 (708)
.-..+..++|++.+..|..+. ..+.|..+++.........+...- .....|++. ++.|+ +-...+.|.+.++..
T Consensus 38 ~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~--~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG 115 (619)
T 3s94_A 38 GLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGL--LSPDGLACDWLGEKLYWTDSETNRIEVSNLDG 115 (619)
T ss_dssp CCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSC--SCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCC--CCcCeEEEEecCCEEEEEeCCCCEEEEEECCC
Confidence 345678999999777777664 457888899876532222444433 578899998 55555 445678999999886
Q ss_pred CeEeEEEeecCCceEEEEEecCCCEEEEEeC--CCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC--
Q psy12614 101 LNIKSSTAVTSGTCWCLSVHKKKRLLAAGTE--QGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-- 176 (708)
Q Consensus 101 ~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~--d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-- 176 (708)
......+...-.....|++.|.+.+|..... .+.|...+++..... ......-.....+++++++..|+.+...
T Consensus 116 ~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~--~l~~~~~~~P~Glald~~~~~LY~aD~~~~ 193 (619)
T 3s94_A 116 SLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRF--IIINSEIYWPNGLTLDYEEQKLYWADAKLN 193 (619)
T ss_dssp CSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCE--EEECSSCSSEEEEEEETTTTEEEEEETTTC
T ss_pred CCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceE--EEEeCCCCCCcEEEEEccCCEEEEEeCCCC
Confidence 5443333344456789999998766666543 466777777755443 2222234567899999988888777654
Q ss_pred eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEEEEcCCCcEEEEeCCCCeeEEEeeccccCeEE-------
Q psy12614 177 AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVKTHKKDILA------- 249 (708)
Q Consensus 177 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~------- 249 (708)
.|...|+.. .....+.... ......+++..+.-+++-...+.|...|..+++....+.........
T Consensus 194 ~I~~~~~dG-~~~~~~~~~~------~~~P~gi~~~~~~ly~td~~~~~V~~~d~~tg~~~~~i~~~~~~p~~i~v~~~~ 266 (619)
T 3s94_A 194 FIHKSNLDG-TNRQAVVKGS------LPHPFALTLFEDILYWTDWSTHSILACNKYTGEGLREIHSDIFSPMDIHAFSQQ 266 (619)
T ss_dssp CEEEESSSC-CEEC---------------CCCEEESSSEEEEECTTTCSEEEEESSSCCCCEECCSCCCCCSEEEECCGG
T ss_pred eEEEecCCC-CccEEEEeCC------CCCceEEEEeCCEEEEecCCCCEEEEEECCCCcccEEEecCCCCCcEEEEEccc
Confidence 899998864 3333332211 12234667766632444455778998888777544333211100111
Q ss_pred ------------------EEE-----------eCCC---------------CEEEEEecCCeEEEEEccCCcccccCCCC
Q psy12614 250 ------------------LTV-----------SEDE---------------NYLYCAGVDPTVVCFQRTRKPQVCSTSGP 285 (708)
Q Consensus 250 ------------------~~~-----------s~~~---------------~~l~~~~~dg~i~iw~~~~~~~~~~~~g~ 285 (708)
+++ +|.| .+|+.+ ..+.|+..++.. +.
T Consensus 267 ~qp~~~n~C~~~ng~Cs~lCl~~~~~~~~~C~C~~g~~l~~d~~~C~~~~~~~Ll~~-~~~~i~~i~l~~--------~~ 337 (619)
T 3s94_A 267 RQPNATNPCGIDNGGCSHLCLMSPVKPFYQCACPTGVKLLENGKTCKDGATELLLLA-RRTDLRRISLDT--------PD 337 (619)
T ss_dssp GSCCCCCTTTTTGGGCSSEEEECSSTTSEEEECCTTCCBCTTSSCBCSSCSEEEEEE-ESSCEEEEESSS--------TT
T ss_pred cCCCccccccCCCCcccceEECCCCCCCceEeCCchheecccCcccCCCCceEEEEE-cccceEEEecCC--------Cc
Confidence 111 1111 112222 123444444443 21
Q ss_pred CCCCcceEEeEEEe-ccccceEEEEEe--CCE-EEEEcCCCeEEEEeCCCCceeecC-ccCCCCceEEEEcCCcEEEEE-
Q psy12614 286 EQGSSVWVRSVNRV-IHEGDVKSLALH--GNR-LYSGGLDSYLSLSYYPPKTLVKYP-CTLAQSTPVSLAKDIQHVLLQ- 359 (708)
Q Consensus 286 ~~~~~~~~~~~~~~-~~~~~v~~l~~~--~~~-l~s~~~d~~i~iw~~~~~~~~~~~-~~~~~~~~~~~s~~~~~l~~~- 359 (708)
.. ...+. ..-..+.+++++ ++. +++-...+.|..+++++.....+. .....+..+++.+.++.|..+
T Consensus 338 ----~~---~~~~~~~~l~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~~~~~~~p~GlAvD~~~~~lY~tD 410 (619)
T 3s94_A 338 ----FT---DIVLQLEDIRHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQIAHPDGIAVDWVARNLYWTD 410 (619)
T ss_dssp ----CC---CEECCCSCCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEE
T ss_pred ----cc---eeEEeccccCccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccEEEEECCCCCcCceEEecccCcEEEEe
Confidence 00 00011 112346778887 444 445556788998988875433332 234567789999755555443
Q ss_pred -cCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEEEc-CCceEEEEEEecCCc
Q psy12614 360 -YTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYST-ESCVRLHSLDLDGDK 437 (708)
Q Consensus 360 -~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~-d~~i~i~~~~~~~~~ 437 (708)
..+.|.+.++.... ...+....-.....+++.|...+|..++ ...-+|+.....+..
T Consensus 411 ~~~~~I~v~~~~G~~---------------------~~~l~~~~l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~dG~~ 469 (619)
T 3s94_A 411 TGTDRIEVTRLNGTM---------------------RKILISEDLEEPRAIVLDPMVGYMYWTDWGEIPKIERAALDGSD 469 (619)
T ss_dssp TTTTEEEEEETTSCS---------------------CEEEECTTCCSEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS
T ss_pred CCCCcEEEEeCCCCe---------------------EEEEEECCCCCeeeEEEEcCCCcEEEecCCCCCEEEEEccCCCc
Confidence 56788888877533 1112223445678999999755565544 222345554432222
Q ss_pred ceeEEeecCCcccccceeEEEEEecCCCeEEEEecCCc-EEEecC
Q psy12614 438 PQISRIKNLPAPLFKSIFTHVLISADSTLLLAVSLNGP-LYIIDL 481 (708)
Q Consensus 438 ~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~~~~~dg~-i~~~~~ 481 (708)
...- ...... ..+.+++++++..|+.+..... |+.++.
T Consensus 470 ~~~l----~~~~l~--~P~GlalD~~~~~LY~aD~~~~~I~~~~~ 508 (619)
T 3s94_A 470 RVVL----VNTSLG--WPNGLALDYDEGKIYWGDAKTDKIEVMNT 508 (619)
T ss_dssp CEEE----ECSSCS--CEEEEEEETTTTEEEEEETTTTEEEEEES
T ss_pred cEEE----EeCCCC--CCeeeEEcccCCEEEEEECCCCEEEEEec
Confidence 1111 111122 3344999998888888876655 766653
|
| >3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A* | Back alignment and structure |
|---|
Probab=99.09 E-value=2.8e-05 Score=82.46 Aligned_cols=469 Identities=9% Similarity=-0.002 Sum_probs=242.5
Q ss_pred EEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEc-CCCcEEEEECCCCeEeE-EEeecCCceE
Q psy12614 40 RLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGG-LQGFVNEYDMRRLNIKS-STAVTSGTCW 115 (708)
Q Consensus 40 ~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~-~d~~i~vwd~~~~~~~~-~~~~~~~~v~ 115 (708)
+|.-+ ....|+..|+.........+...- ....+|+|+ ++.|+.+. ..+.|..++++...... .+...-....
T Consensus 11 ~~~~~-~~~~I~~i~~~~~~~~~~~~~~~~--~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~ 87 (619)
T 3s94_A 11 LLLYA-NRRDLRLVDATNGKENATIVVGGL--EDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPD 87 (619)
T ss_dssp CEEEE-CSSBEEEECCC---------CBCC--SCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEE
T ss_pred eEEEe-ccccEEEEeCCCCcceEEEEEcCC--CceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcC
Confidence 34444 345788988886531111233333 568899999 66666554 56889999987754322 2333235788
Q ss_pred EEEEecCCCEEEEE-eCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecC--C-eEEEEEcCCCceEEE
Q psy12614 116 CLSVHKKKRLLAAG-TEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCA--A-AVRVWDIHKGHAIHK 191 (708)
Q Consensus 116 ~~~~s~~~~~la~~-~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~--d-~i~iwd~~~~~~~~~ 191 (708)
.+++.+.+..|+.+ ...+.|.+.+..+.... ..+...-.....|++.|.+.+|+.... . .|...++. |.....
T Consensus 88 GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~--~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~d-G~~~~~ 164 (619)
T 3s94_A 88 GLACDWLGEKLYWTDSETNRIEVSNLDGSLRK--VLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMD-GSSRFI 164 (619)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSCSCE--EEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETT-SCSCEE
T ss_pred eEEEEecCCEEEEEeCCCCEEEEEECCCCCEE--EEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECC-CCceEE
Confidence 99999976655554 45788999999876543 222233445678999997666665543 3 66666764 443333
Q ss_pred EEecccCCCCCceeEEEEEEccCC-EEE-EEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEe-cCCeE
Q psy12614 192 MSLDKSSKFSKNTAVWCVAFCADF-TII-TGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAG-VDPTV 268 (708)
Q Consensus 192 ~~~~~~~~~~~~~~v~~~~~~~~~-~l~-~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-~dg~i 268 (708)
+... .-.....+++.+++ +|. +-...+.|...|+..........+.......+++..+ .|+.+. ..+.|
T Consensus 165 l~~~------~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~gi~~~~~--~ly~td~~~~~V 236 (619)
T 3s94_A 165 IINS------EIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFED--ILYWTDWSTHSI 236 (619)
T ss_dssp EECS------SCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC---------CCCEEESSS--EEEEECTTTCSE
T ss_pred EEeC------CCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEEeCCCCCceEEEEeCC--EEEEecCCCCEE
Confidence 3321 14567899999864 654 4455678999998654332222212223346777655 555444 46788
Q ss_pred EEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe----CCEEEEE-----cCCCeEEEEeCCCC--ceeec
Q psy12614 269 VCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH----GNRLYSG-----GLDSYLSLSYYPPK--TLVKY 337 (708)
Q Consensus 269 ~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~----~~~l~s~-----~~d~~i~iw~~~~~--~~~~~ 337 (708)
...|..+ |+. ...+........++.+. ....... +.-..+++-..... .+.-.
T Consensus 237 ~~~d~~t--------g~~--------~~~i~~~~~~p~~i~v~~~~~qp~~~n~C~~~ng~Cs~lCl~~~~~~~~~C~C~ 300 (619)
T 3s94_A 237 LACNKYT--------GEG--------LREIHSDIFSPMDIHAFSQQRQPNATNPCGIDNGGCSHLCLMSPVKPFYQCACP 300 (619)
T ss_dssp EEEESSS--------CCC--------CEECCSCCCCCSEEEECCGGGSCCCCCTTTTTGGGCSSEEEECSSTTSEEEECC
T ss_pred EEEECCC--------Ccc--------cEEEecCCCCCcEEEEEccccCCCccccccCCCCcccceEECCCCCCCceEeCC
Confidence 8888877 431 11111111111122211 0000000 00001111111000 00000
Q ss_pred Cc---cCCCCceEEEEcCCcEEEEEcCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCC
Q psy12614 338 PC---TLAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSND 414 (708)
Q Consensus 338 ~~---~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~ 414 (708)
.+ ......+. .....+|+.+..+.|+..++..... ....+....-..+.+++|.+.
T Consensus 301 ~g~~l~~d~~~C~--~~~~~~Ll~~~~~~i~~i~l~~~~~-------------------~~~~~~~~~l~~~~~ld~d~~ 359 (619)
T 3s94_A 301 TGVKLLENGKTCK--DGATELLLLARRTDLRRISLDTPDF-------------------TDIVLQLEDIRHAIAIDYDPV 359 (619)
T ss_dssp TTCCBCTTSSCBC--SSCSEEEEEEESSCEEEEESSSTTC-------------------CCEECCCSCCSSEEEEEEETT
T ss_pred chheecccCcccC--CCCceEEEEEcccceEEEecCCCcc-------------------ceeEEeccccCccEEEEEEcC
Confidence 00 00000111 1123456666677777777765430 001111122345778999987
Q ss_pred CcEEEEEc--CCceEEEEEEecCCcceeEEeecCCcccccceeEEEEEecCCCeEEEEecCCc-EEEecCCCeEEEEEec
Q psy12614 415 GKYVAYST--ESCVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVLISADSTLLLAVSLNGP-LYIIDLSSLEIKYCVD 491 (708)
Q Consensus 415 g~~l~~~~--d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~~~~~dg~-i~~~~~~~~~~~~~~~ 491 (708)
+..|..++ .+.|+.++++. .... .+ +..... ....+++.+.+..|+.+..... |...+... .....+.
T Consensus 360 ~~~ly~sD~~~~~I~r~~~~g--~~~~--~v--~~~~~~--~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~G-~~~~~l~ 430 (619)
T 3s94_A 360 EGYIYWTDDEVRAIRRSFIDG--SGSQ--FV--VTAQIA--HPDGIAVDWVARNLYWTDTGTDRIEVTRLNG-TMRKILI 430 (619)
T ss_dssp TTEEEEEETTTTEEEEEETTS--CSCE--EE--ECSSCS--CCCEEEEETTTTEEEEEETTTTEEEEEETTS-CSCEEEE
T ss_pred CCeEEEEeCCCCeEEEEEcCC--CccE--EE--EECCCC--CcCceEEecccCcEEEEeCCCCcEEEEeCCC-CeEEEEE
Confidence 66676654 56666655543 2211 11 111111 2333899987777776655444 55443321 1122222
Q ss_pred CCCCCccCcceEEEEECCCCcEEEEEec--CCeEEEEECC-ceee-ecCCCCCCceEEEEcCCCCEEEEEec-CCcEEEE
Q psy12614 492 PYKSNLMSDVISLVQMSECKQYIVCADR--KSHVVIWKNG-QHHA-SLPRYRKPSTAMAIHPTLSTLVTVYS-DHRIVEF 566 (708)
Q Consensus 492 ~~~~~~~~~~i~~~~~s~~~~~l~~~~~--d~~i~iw~~~-~~~~-~~~~~~~~v~~l~~s~d~~~l~~~~~-dg~i~vw 566 (708)
.. + -.....+++.|...+|+.++. ...|...+++ +... .....-..++.|++.++++.|..+.. .+.|..+
T Consensus 431 ~~-~---l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~l~~P~GlalD~~~~~LY~aD~~~~~I~~~ 506 (619)
T 3s94_A 431 SE-D---LEEPRAIVLDPMVGYMYWTDWGEIPKIERAALDGSDRVVLVNTSLGWPNGLALDYDEGKIYWGDAKTDKIEVM 506 (619)
T ss_dssp CT-T---CCSEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred EC-C---CCCeeeEEEEcCCCcEEEecCCCCCEEEEEccCCCccEEEEeCCCCCCeeeEEcccCCEEEEEECCCCEEEEE
Confidence 11 1 346789999997556665542 3677777777 2222 22333467889999998888887765 4679999
Q ss_pred EcCCCC
Q psy12614 567 DLNRKA 572 (708)
Q Consensus 567 d~~~~~ 572 (708)
+++...
T Consensus 507 ~~dG~~ 512 (619)
T 3s94_A 507 NTDGTG 512 (619)
T ss_dssp ESSSCC
T ss_pred ecCCCc
Confidence 987654
|
| >2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=99.09 E-value=6.5e-08 Score=94.97 Aligned_cols=229 Identities=13% Similarity=0.062 Sum_probs=147.7
Q ss_pred Ec--CCCCEEEEE-eCCCcEEEEeCCCC--C-eEEEEEe------cCCCCCcEEEEEEe-CCEEEEEcCC------CcEE
Q psy12614 34 CE--PKSSRLAVS-RADQSIEIWDISET--P-HVDRVFI------GDPLSNSIECLTWF-NDRLFSGGLQ------GFVN 94 (708)
Q Consensus 34 ~s--~~~~~la~~-~~dg~v~iwd~~~~--~-~~~~~~~------~h~~~~~v~~l~~~-~~~l~s~~~d------~~i~ 94 (708)
++ +++++|++. ..++.|.|+|+.+. + .+.++++ ... ...-..+..+ +..++++..+ |.|.
T Consensus 89 ~~~~~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g-~s~Ph~~~~~pdGi~Vs~~g~~~g~~~g~v~ 167 (462)
T 2ece_A 89 GKPNIERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSG-YSRLHTVHCGPDAIYISALGNEEGEGPGGIL 167 (462)
T ss_dssp CCTTCCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHC-EEEEEEEEECSSCEEEEEEEETTSCSCCEEE
T ss_pred cCCCccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccC-CCcccceeECCCeEEEEcCCCcCCCCCCeEE
Confidence 37 888887765 55788999999754 1 2223552 111 0234455566 3366666555 7899
Q ss_pred EEECCCCeEeEEEeecCC---ceEEEEEecCCCEEEEEe-------------------CCCcEEEEEccCCcEEEEEecc
Q psy12614 95 EYDMRRLNIKSSTAVTSG---TCWCLSVHKKKRLLAAGT-------------------EQGHINLFQISDEGLLYEKLLD 152 (708)
Q Consensus 95 vwd~~~~~~~~~~~~~~~---~v~~~~~s~~~~~la~~~-------------------~d~~i~iwd~~~~~~~~~~~~~ 152 (708)
+.|.++.+.+.++....+ --..+.|+|+++.+++.. ...+|.+||+.+++......+.
T Consensus 168 vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg 247 (462)
T 2ece_A 168 MLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLG 247 (462)
T ss_dssp EECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESC
T ss_pred EEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecC
Confidence 999999999988873322 233578899999888864 3688999999998766333332
Q ss_pred cccccEEEEEE--CCCCCEEEEecC-----C--eEEEEEcCCCceEE--EEEecccCC----------CCC-ceeEEEEE
Q psy12614 153 RQQGRILCTAW--HSSGDYLVTGCA-----A--AVRVWDIHKGHAIH--KMSLDKSSK----------FSK-NTAVWCVA 210 (708)
Q Consensus 153 ~~~~~v~~~~~--s~d~~~l~~~~~-----d--~i~iwd~~~~~~~~--~~~~~~~~~----------~~~-~~~v~~~~ 210 (708)
........+.| +|+++++++++. . +|.+|....++... .+....... |.. ......+.
T Consensus 248 ~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~ 327 (462)
T 2ece_A 248 EENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDID 327 (462)
T ss_dssp TTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEE
T ss_pred CCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEE
Confidence 12234455655 999999988775 3 78877766554221 111111000 000 13467899
Q ss_pred EccCCE--EEEEcCCCcEEEEeCCC---CeeEEEeeccc--------------cCeEEEEEeCCCCEEEEEe
Q psy12614 211 FCADFT--IITGDSGGFVRFWDGKT---GVQWSDVKTHK--------------KDILALTVSEDENYLYCAG 263 (708)
Q Consensus 211 ~~~~~~--l~~~~~dg~i~~wd~~~---~~~~~~~~~~~--------------~~i~~~~~s~~~~~l~~~~ 263 (708)
+++||+ +++.-..+.|.+||+.. .+.+..+.... +.-..++++|||++|+++.
T Consensus 328 lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 328 ISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp ECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred ECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 999996 44555678999999853 35555554321 1357899999999999987
|
| >1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1 | Back alignment and structure |
|---|
Probab=99.07 E-value=8.8e-07 Score=83.90 Aligned_cols=245 Identities=8% Similarity=-0.033 Sum_probs=152.1
Q ss_pred CEEEEEcCCCcEEEEECCCCeEe-----EEEeecCCceEEEEEecCCCEEEEEe-CCCcEEEEEccCCcEEEEEeccccc
Q psy12614 82 DRLFSGGLQGFVNEYDMRRLNIK-----SSTAVTSGTCWCLSVHKKKRLLAAGT-EQGHINLFQISDEGLLYEKLLDRQQ 155 (708)
Q Consensus 82 ~~l~s~~~d~~i~vwd~~~~~~~-----~~~~~~~~~v~~~~~s~~~~~la~~~-~d~~i~iwd~~~~~~~~~~~~~~~~ 155 (708)
.+|+.+.. +.|+.+++...... ..+......+..+++++++..|..+. ..+.|..++..++... .......
T Consensus 2 ~~l~~~~~-~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~--~~~~~~~ 78 (267)
T 1npe_A 2 THLLFAQT-GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPT--TIIRQDL 78 (267)
T ss_dssp EEEEEEEE-EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCE--EEECTTC
T ss_pred cEEEEEcC-CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcE--EEEECCC
Confidence 34555443 47888888765421 12222234678999999777666554 4688999999876543 2232223
Q ss_pred ccEEEEEECCCCCEEEEecC-C-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccC-CEEEEEcC---CCcEEEE
Q psy12614 156 GRILCTAWHSSGDYLVTGCA-A-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCAD-FTIITGDS---GGFVRFW 229 (708)
Q Consensus 156 ~~v~~~~~s~d~~~l~~~~~-d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l~~~~~---dg~i~~w 229 (708)
.....++++|++..|+.+.. . .|.++++.... ...+... .......+++.|+ +.+..+.. .+.|..+
T Consensus 79 ~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~-~~~~~~~------~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~ 151 (267)
T 1npe_A 79 GSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQ-RRVLFDT------GLVNPRGIVTDPVRGNLYWTDWNRDNPKIETS 151 (267)
T ss_dssp CCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEEECS------SCSSEEEEEEETTTTEEEEEECCSSSCEEEEE
T ss_pred CCccEEEEEecCCeEEEEECCCCEEEEEEcCCCC-EEEEEEC------CCCCccEEEEeeCCCEEEEEECCCCCcEEEEE
Confidence 46789999998776666554 4 89999986433 2223211 1245689999995 56555543 4688888
Q ss_pred eCCCCeeEEEee-ccccCeEEEEEeCCCCEEEEEec-CCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEE
Q psy12614 230 DGKTGVQWSDVK-THKKDILALTVSEDENYLYCAGV-DPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKS 307 (708)
Q Consensus 230 d~~~~~~~~~~~-~~~~~i~~~~~s~~~~~l~~~~~-dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~ 307 (708)
++. +.....+. ........+++++++..|+.+.. .+.|..++... +. ...... .......
T Consensus 152 ~~d-g~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g--------~~--------~~~~~~-~~~~P~g 213 (267)
T 1npe_A 152 HMD-GTNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQ--------PG--------RRKVLE-GLQYPFA 213 (267)
T ss_dssp ETT-SCCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTE--------EE--------EEEEEE-CCCSEEE
T ss_pred ecC-CCCcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCC--------Cc--------eEEEec-CCCCceE
Confidence 875 33323322 23346788999998877766654 57899999876 21 111112 2233456
Q ss_pred EEEeCC-EEEEEcCCCeEEEEeCCCCc-eeecCc-cCCCCceEEEEcCCc
Q psy12614 308 LALHGN-RLYSGGLDSYLSLSYYPPKT-LVKYPC-TLAQSTPVSLAKDIQ 354 (708)
Q Consensus 308 l~~~~~-~l~s~~~d~~i~iw~~~~~~-~~~~~~-~~~~~~~~~~s~~~~ 354 (708)
++..++ .+++....+.|..++..+.. +..+.. ..+.+..+++.|++.
T Consensus 214 i~~d~~~lyva~~~~~~v~~~d~~~g~~~~~i~~g~~~~p~gi~~~~~~~ 263 (267)
T 1npe_A 214 VTSYGKNLYYTDWKTNSVIAMDLAISKEMDTFHPHKQTRLYGITIALSQC 263 (267)
T ss_dssp EEEETTEEEEEETTTTEEEEEETTTTEEEEEECCSSCCCCCCEEEECSCC
T ss_pred EEEeCCEEEEEECCCCeEEEEeCCCCCceEEEccccccccceeeecCccC
Confidence 777744 44555566899999998765 444431 123467888888764
|
| >1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1 | Back alignment and structure |
|---|
Probab=99.07 E-value=1.4e-08 Score=99.62 Aligned_cols=260 Identities=9% Similarity=-0.058 Sum_probs=164.2
Q ss_pred cEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEc----------CCCcEEEEECCCCeEeEEEeec------
Q psy12614 49 SIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGG----------LQGFVNEYDMRRLNIKSSTAVT------ 110 (708)
Q Consensus 49 ~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~----------~d~~i~vwd~~~~~~~~~~~~~------ 110 (708)
.|.+.|..+++.+. .+.... .+ .++++ +++++++. .++.|.+||..+++.+.++...
T Consensus 47 ~vsvID~~t~~v~~-~i~vG~--~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~ 121 (368)
T 1mda_H 47 ENWVSCAGCGVTLG-HSLGAF--LS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFS 121 (368)
T ss_dssp EEEEEETTTTEEEE-EEEECT--TC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCC
T ss_pred eEEEEECCCCeEEE-EEeCCC--CC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccc
Confidence 78899999999988 454434 45 79999 78888775 4789999999999999998754
Q ss_pred -CCceEEEEEecCCCEEEEEeC--CCcEEE--EEccCCcEEEEEecccccccEEEEEECCCCC-EEEEecCC-eEEEEEc
Q psy12614 111 -SGTCWCLSVHKKKRLLAAGTE--QGHINL--FQISDEGLLYEKLLDRQQGRILCTAWHSSGD-YLVTGCAA-AVRVWDI 183 (708)
Q Consensus 111 -~~~v~~~~~s~~~~~la~~~~--d~~i~i--wd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~-~l~~~~~d-~i~iwd~ 183 (708)
......++|+|||++++++.. +..+.+ +|..+ . ..+.- .+. ..+.|+++ .+++.+.| .+.+.|+
T Consensus 122 ~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v--~~i~v-~~~---~~~~p~g~~~~~~~~~dg~~~~vd~ 192 (368)
T 1mda_H 122 VGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---D--QLTKS-ASC---FHIHPGAAATHYLGSCPASLAASDL 192 (368)
T ss_dssp BSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---E--EEEEC-SSC---CCCEEEETTEEECCCCTTSCEEEEC
T ss_pred cCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---c--eEEEC-CCc---eEEccCCCeEEEEEcCCCCEEEEEC
Confidence 134668999999999998864 467888 88877 2 22211 111 11234443 33444455 6667777
Q ss_pred CC-----CceEEE----EEecccCCCCCceeEEEEEEccCCEEEEEcCCCcEEEEeCCCCe--eEEEeec----------
Q psy12614 184 HK-----GHAIHK----MSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGV--QWSDVKT---------- 242 (708)
Q Consensus 184 ~~-----~~~~~~----~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~wd~~~~~--~~~~~~~---------- 242 (708)
.+ ++.... +..+ ..+. ++..++.++..+. +.|.+.|..++. .+..+..
T Consensus 193 ~~~~~~~~~v~~~~t~~i~vg-------~~P~---~~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~ 261 (368)
T 1mda_H 193 AAAPAAAGIVGAQCTGAQNCS-------SQAA---QANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNF 261 (368)
T ss_dssp CSSCCCCEECCCCSCTTSCBC-------SCCE---EETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTE
T ss_pred ccccccCCeEEEEeeeeeeCC-------CCcc---ccccCCEEEEEcC-CEEEEEECCCCcceEEEEEEecccccccccc
Confidence 65 332211 1111 2232 3444446666666 999999986542 2322211
Q ss_pred cccCeEEEEEeCCCCEEEEEec-C--------CeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--
Q psy12614 243 HKKDILALTVSEDENYLYCAGV-D--------PTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH-- 311 (708)
Q Consensus 243 ~~~~i~~~~~s~~~~~l~~~~~-d--------g~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~-- 311 (708)
.......++++||+++++++.. . +.+.++|..+ .+ ....+... .....++++
T Consensus 262 ~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t--------~~--------vv~~i~vg-~~p~gi~~s~D 324 (368)
T 1mda_H 262 RSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASV--------GQ--------TSGPISNG-HDSDAIIAAQD 324 (368)
T ss_dssp EECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSS--------CC--------EEECCEEE-EEECEEEECCS
T ss_pred ccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCC--------Ce--------EEEEEECC-CCcceEEECCC
Confidence 1112222789999999987643 2 3566999998 54 33333322 257788888
Q ss_pred CC-EEEEEc-CCCeEEEEeCCCCceeecCccCCCCceEEEE
Q psy12614 312 GN-RLYSGG-LDSYLSLSYYPPKTLVKYPCTLAQSTPVSLA 350 (708)
Q Consensus 312 ~~-~l~s~~-~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s 350 (708)
++ .+++.. .++.|.++|+.+.+..........+..+++.
T Consensus 325 g~~l~va~~~~~~~VsVID~~t~kvv~~I~vg~~P~~i~~~ 365 (368)
T 1mda_H 325 GASDNYANSAGTEVLDIYDAASDQDQSSVELDKGPESLSVQ 365 (368)
T ss_dssp SSCEEEEEETTTTEEEEEESSSCEEEEECCCCSCCCEEECC
T ss_pred CCEEEEEccCCCCeEEEEECCCCcEEEEEECCCCCCEEEee
Confidence 55 566666 5999999999998754433233444455443
|
| >2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A* | Back alignment and structure |
|---|
Probab=99.06 E-value=4.8e-07 Score=95.33 Aligned_cols=300 Identities=14% Similarity=0.111 Sum_probs=186.2
Q ss_pred CCEEEEEeC-CCcEEEEeC-CCCCeEEEEEecCCCCCc----------EEEEEEeCCEEEEEcCCCcEEEEECCCCeEeE
Q psy12614 38 SSRLAVSRA-DQSIEIWDI-SETPHVDRVFIGDPLSNS----------IECLTWFNDRLFSGGLQGFVNEYDMRRLNIKS 105 (708)
Q Consensus 38 ~~~la~~~~-dg~v~iwd~-~~~~~~~~~~~~h~~~~~----------v~~l~~~~~~l~s~~~d~~i~vwd~~~~~~~~ 105 (708)
+..|.+++. ++.|.-+|. .+|+.+= ...... ... -..++..+..++.++.|+.|..+|..+|+.+.
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~~W-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~l~alD~~tG~~~W 139 (571)
T 2ad6_A 62 GDMMYVHSAFPNNTYALNLNDPGKIVW-QHKPKQ-DASTKAVMCCDVVDRGLAYGAGQIVKKQANGHLLALDAKTGKINW 139 (571)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEE-EECCCC-CGGGGGGCTTCSCCCCCEEETTEEEEECTTSEEEEEETTTCCEEE
T ss_pred CCEEEEEeCCCCEEEEEeCCCCccEEE-EEcCCC-CccccccccccccccccEEECCEEEEEeCCCEEEEEECCCCCEEE
Confidence 556777777 889999999 8998764 222111 000 12344558899999999999999999999988
Q ss_pred EEeecC----CceEE-EEEecCCCEEEEEeC------CCcEEEEEccCCcEEEEEecccccc------------------
Q psy12614 106 STAVTS----GTCWC-LSVHKKKRLLAAGTE------QGHINLFQISDEGLLYEKLLDRQQG------------------ 156 (708)
Q Consensus 106 ~~~~~~----~~v~~-~~~s~~~~~la~~~~------d~~i~iwd~~~~~~~~~~~~~~~~~------------------ 156 (708)
...... ..+.+ .... + ..+++++. ++.|..+|..+|+.+..........
T Consensus 140 ~~~~~~~~~~~~~~~~P~v~-~-g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~~ 217 (571)
T 2ad6_A 140 EVEVCDPKVGSTLTQAPFVA-K-DTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQF 217 (571)
T ss_dssp EEECCCGGGTCBCCSCCEEE-T-TEEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCS
T ss_pred EecCCCCCccceeccCCEEE-C-CEEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCccccccCccccccccccccc
Confidence 765322 01211 1111 3 45566554 7899999999999886444322110
Q ss_pred ------------------cEEEEEECCCCCEEEEecCC-----------------eEEEEEcCCCceEEEEEecccCC--
Q psy12614 157 ------------------RILCTAWHSSGDYLVTGCAA-----------------AVRVWDIHKGHAIHKMSLDKSSK-- 199 (708)
Q Consensus 157 ------------------~v~~~~~s~d~~~l~~~~~d-----------------~i~iwd~~~~~~~~~~~~~~~~~-- 199 (708)
....+++.++...++.+..+ .|..+|..+|+.+..+.......
T Consensus 218 ~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d 297 (571)
T 2ad6_A 218 GLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWD 297 (571)
T ss_dssp SHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSC
T ss_pred ccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcccc
Confidence 00135566766677665531 49999999999998887542100
Q ss_pred C-CCceeEEEEEEccCCE----EEEEcCCCcEEEEeCCCCeeEEEeeccc-------------cCe--------------
Q psy12614 200 F-SKNTAVWCVAFCADFT----IITGDSGGFVRFWDGKTGVQWSDVKTHK-------------KDI-------------- 247 (708)
Q Consensus 200 ~-~~~~~v~~~~~~~~~~----l~~~~~dg~i~~wd~~~~~~~~~~~~~~-------------~~i-------------- 247 (708)
+ ....++. +....+|+ ++.++.+|.++++|..+|+.+....... .++
T Consensus 298 ~~~~~~p~l-~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~ 376 (571)
T 2ad6_A 298 FAGVNQMVL-TDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGT 376 (571)
T ss_dssp CCCCCCCEE-EEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEE
T ss_pred cccCCCCEE-EecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCCCCce
Confidence 0 0012221 22234673 5678889999999999999877654221 111
Q ss_pred ------------EEEEEeCCCCEEEEEec-------------------------------------CCeEEEEEccCCcc
Q psy12614 248 ------------LALTVSEDENYLYCAGV-------------------------------------DPTVVCFQRTRKPQ 278 (708)
Q Consensus 248 ------------~~~~~s~~~~~l~~~~~-------------------------------------dg~i~iw~~~~~~~ 278 (708)
..++++|+..++++... +|.|..||..+
T Consensus 377 ~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~t--- 453 (571)
T 2ad6_A 377 NICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTT--- 453 (571)
T ss_dssp EESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTT---
T ss_pred EECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCC---
Confidence 24678888888877643 46788888888
Q ss_pred cccCCCCCCCCcceEEeEEEeccccceEEE--EEeCCEEEEEcCCCeEEEEeCCCCcee-ecCc-cCCCCceEEEEcCCc
Q psy12614 279 VCSTSGPEQGSSVWVRSVNRVIHEGDVKSL--ALHGNRLYSGGLDSYLSLSYYPPKTLV-KYPC-TLAQSTPVSLAKDIQ 354 (708)
Q Consensus 279 ~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l--~~~~~~l~s~~~d~~i~iw~~~~~~~~-~~~~-~~~~~~~~~~s~~~~ 354 (708)
|+ ..|. ... ...+.+. ...+..++.++.|+.++.+|..+++.. ++.. .......+.+..+|+
T Consensus 454 -----G~----~~W~----~~~-~~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~~~~~G~ 519 (571)
T 2ad6_A 454 -----GK----AKWT----KWE-KFAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKMPSGGIGSPMTYSFKGK 519 (571)
T ss_dssp -----CC----EEEE----EEE-SSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTE
T ss_pred -----CC----EEEE----ecC-CCCccceeEEECCCEEEEEcCCCeEEEEECCCCCEEEEEeCCCCcEeeeEEEEECCE
Confidence 65 3333 211 1222222 223788888999999999999887733 3321 112234455667887
Q ss_pred EEEEE
Q psy12614 355 HVLLQ 359 (708)
Q Consensus 355 ~l~~~ 359 (708)
.++..
T Consensus 520 ~yv~~ 524 (571)
T 2ad6_A 520 QYIGS 524 (571)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 66654
|
| >2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.03 E-value=8.3e-11 Score=117.33 Aligned_cols=178 Identities=15% Similarity=0.103 Sum_probs=105.5
Q ss_pred eCCEEEEEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEeccccc-ccE
Q psy12614 80 FNDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQ-GRI 158 (708)
Q Consensus 80 ~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~-~~v 158 (708)
.++.+++++.||.|..||..+|+.+..+.. +.+.+..+..++..+++++.|+.|+.||.++++... .+..+. ..+
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w--~~~~~~~~~~ 83 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLT--KLPFTIPELV 83 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSE--ECSCCHHHHH
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceee--eeeccCcccc
Confidence 378999999999999999999999988876 556666667788888888899999999998887653 222221 111
Q ss_pred E-EEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCC-EEEEEcCCCcEEEEeCCCCe
Q psy12614 159 L-CTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADF-TIITGDSGGFVRFWDGKTGV 235 (708)
Q Consensus 159 ~-~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~~~~~dg~i~~wd~~~~~ 235 (708)
. +..+. ++..|++++.+ .+..||..+|+.+..+... . ...++|++ .+++++.++.|+.||.++|+
T Consensus 84 ~~sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~-------~----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~ 151 (369)
T 2hz6_A 84 QASPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSA-------F----ADSLSPSTSLLYLGRTEYTITMYDTKTRE 151 (369)
T ss_dssp TTCSCC------CCCCEEEEEEEEECCC---------------------------------EEEEEEEEEEECCCSSSSS
T ss_pred ccCceEe-cCCEEEEEeCCCEEEEEECCCCcEEEEecCC-------C----cccccccCCEEEEEecCCEEEEEECCCCC
Confidence 0 11111 34567778878 9999999999998777543 1 12344555 58888899999999999998
Q ss_pred eEEEeeccccCeEEEEEeCCC---CEEEEEecCCeEEEEEccC
Q psy12614 236 QWSDVKTHKKDILALTVSEDE---NYLYCAGVDPTVVCFQRTR 275 (708)
Q Consensus 236 ~~~~~~~~~~~i~~~~~s~~~---~~l~~~~~dg~i~iw~~~~ 275 (708)
.+..+..+. ....+++++. ..+++++.+|.++.||..+
T Consensus 152 ~~W~~~~~~--~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~t 192 (369)
T 2hz6_A 152 LRWNATYFD--YAASLPEDDVDYKMSHFVSNGDGLVVTVDSES 192 (369)
T ss_dssp CCCEEEEEE--ECCBCCCCCTTCCCCEEEEETSCEEEEECTTT
T ss_pred EEEeEeccc--ccCccccCCccccceEEEECCCCEEEEEECCC
Confidence 765554221 1233344432 5677888999999999998
|
| >3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A | Back alignment and structure |
|---|
Probab=99.01 E-value=8.9e-05 Score=81.84 Aligned_cols=519 Identities=11% Similarity=0.061 Sum_probs=283.9
Q ss_pred CCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEeCCEEEEEcCCCcEEEEECCCCeEeE
Q psy12614 26 PKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWFNDRLFSGGLQGFVNEYDMRRLNIKS 105 (708)
Q Consensus 26 ~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~~~~l~s~~~d~~i~vwd~~~~~~~~ 105 (708)
...|.++....+| .|-+|+.+| +..||..+..... ...... ..|.++......|..++.+ -|..+|..+++...
T Consensus 62 ~~~i~~i~~d~~g-~lWigT~~G-l~~yd~~~~~f~~-~~~~~~--~~i~~i~~~~g~lWigt~~-Gl~~~~~~~~~~~~ 135 (758)
T 3ott_A 62 NTRIYCGVIIDNT-YLYMGTDNG-ILVYNYRADRYEQ-PETDFP--TDVRTMALQGDTLWLGALN-GLYTYQLQSRKLTS 135 (758)
T ss_dssp SSCEEEEEEETTT-EEEEEETTE-EEEEETTTTEECC-CSCCCC--SCEEEEEEETTEEEEEETT-EEEEEETTTCCEEE
T ss_pred CceEEEEEEcCCC-cEEEEeCCC-eEEEeCCCCEEEC-cccCCC--ceEEEEEecCCcEEEEcCC-cceeEeCCCCeEEE
Confidence 3568998888776 455666665 8899998765432 111112 4577776565567777666 68889987765432
Q ss_pred EEe----ecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccc----cccEEEEEECCCCCEEEEecCCe
Q psy12614 106 STA----VTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQ----QGRILCTAWHSSGDYLVTGCAAA 177 (708)
Q Consensus 106 ~~~----~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~----~~~v~~~~~s~d~~~l~~~~~d~ 177 (708)
... .....|.++....+|.+.+ |+.+ -|..++..+++... ...... ...|.++...+++..|..++.+.
T Consensus 136 ~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~~-Gl~~~~~~~~~~~~-~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~~G 212 (758)
T 3ott_A 136 FDTRRNGLPNNTIYSIIRTKDNQIYV-GTYN-GLCRYIPSNGKFEG-IPLPVHSSQSNLFVNSLLEDTTRQCVWIGTEGY 212 (758)
T ss_dssp ECHHHHCCSCSCEEEEEECTTCCEEE-EETT-EEEEEETTTTEEEE-ECCCCCTTCSSCCEEEEEEETTTTEEEEEEEEE
T ss_pred eccCCCCcCCCeEEEEEEcCCCCEEE-EeCC-CHhhCccCCCceEE-ecCCCccccccceeEEEEEECCCCEEEEEECCC
Confidence 201 1235688888888887655 4554 47788887776532 111111 23488888877776555555347
Q ss_pred EEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEEEEcCCCcEEEEeCCCCeeEEEee-------ccccCeEEE
Q psy12614 178 VRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVK-------THKKDILAL 250 (708)
Q Consensus 178 i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~-------~~~~~i~~~ 250 (708)
+..+|..+++........ ...|.++...++|.+..|+. +-+.+++..+++...... -....|.++
T Consensus 213 l~~~~~~~~~~~~~~~l~-------~~~i~~i~~d~~g~lWigT~-~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i 284 (758)
T 3ott_A 213 LFQYFPSTGQIKQTEAFH-------NNSIKSLALDGNGDLLAGTD-NGLYVYHNDTTPLQHIIHDSRNIQSLTNNIIWNI 284 (758)
T ss_dssp EEEEETTTTEEEEEEEEE-------EEEEEEEEECTTCCEEEEET-TEEEEECCTTSCCEEECCCTTCTTSCSCSCEEEE
T ss_pred CeEEcCCCCeEEeccCCC-------CCeEEEEEEcCCCCEEEEeC-CceeEEecCCCcEEEEEcCCCCcCcCCcCeEEEE
Confidence 888998776543322221 45688898888888777775 458889887664432211 123458888
Q ss_pred EEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEe-----ccccceEEEEEe-CCEEEEEcCCCeE
Q psy12614 251 TVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRV-----IHEGDVKSLALH-GNRLYSGGLDSYL 324 (708)
Q Consensus 251 ~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~-----~~~~~v~~l~~~-~~~l~s~~~d~~i 324 (708)
....+|+.- .|+..| +.++.... . + ...... .....|.++... ...|..|+.+| +
T Consensus 285 ~~D~~g~lW-iGT~~G-l~~~~~~~---------~------~-~~~~~~~~~~~~~~~~v~~i~~D~~g~lWiGt~~G-l 345 (758)
T 3ott_A 285 FADQEHNIW-LGTDYG-ISLSRYNS---------A------L-QFIPISQITGTGDGNQFYSLFRDSKGFYWFGGANG-L 345 (758)
T ss_dssp EECTTCCEE-EEESSS-EEEECCCC----------------C-EEEEHHHHSCSCCCCBEEEEEECTTCCEEEEETTE-E
T ss_pred EEcCCCCEE-EEeCCc-ccccccCC---------c------e-eEEecccCCCCCCCceEEEEEEcCCCCEEEeeCCc-c
Confidence 888877644 455556 54443222 0 0 000000 112457787777 55555666554 5
Q ss_pred EEEeCCCCc---eeecC-----ccCC--CCceEEEEcCCcEEEEEcCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceE
Q psy12614 325 SLSYYPPKT---LVKYP-----CTLA--QSTPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRL 394 (708)
Q Consensus 325 ~iw~~~~~~---~~~~~-----~~~~--~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (708)
..++..+.. ...+. .... .+.++....+|++-+.. ++.+..|+..++. ..
T Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lWigt-~~GL~~~~~~~~~-------------------~~ 405 (758)
T 3ott_A 346 IRFTDPAGERHDAIWYRMGDKTYPLSHNRIRHIYEDKEQQLWIAT-DGSINRYDYATRQ-------------------FI 405 (758)
T ss_dssp EEESCTTSSCCCCEEECTTCSSSCCSCSCEEEEEECTTSCEEEEE-TTEEEEEETTTTE-------------------EE
T ss_pred eeecccccccceeEEeccCCcCCCCCCCceEEEEECCCCCEEEEe-CCcHhhcCcCCCc-------------------EE
Confidence 556554421 11111 0111 22445556677776665 5688888876643 11
Q ss_pred EEEEEec----CCCceEEEEeCCCCcEEEEEcCCceEEEEEEec---CCcceeE---EeecCCcccccceeEEEEEecCC
Q psy12614 395 IVKMSAV----NNATIRCSVVSNDGKYVAYSTESCVRLHSLDLD---GDKPQIS---RIKNLPAPLFKSIFTHVLISADS 464 (708)
Q Consensus 395 ~~~~~~~----~~~~i~~~~~s~~g~~l~~~~d~~i~i~~~~~~---~~~~~~~---~~~~~~~~~~~~~i~~~~~s~d~ 464 (708)
....... ....|.++...++|.+.+....+.+.+++.... ... .+. ... .........|.++...++|
T Consensus 406 ~~~~~~~~~~~~~~~v~~i~~d~~g~lWigT~~~Gl~~~~~~~~~~~~~~-~~~~~~~~~-~~~~l~~~~i~~i~~d~~g 483 (758)
T 3ott_A 406 HYNIVDNTGTYNTNWTYYIFEDTAGQLWISTCLGGIFVVDKHKLMQSTSG-QYIAEQNYS-VHNGLSGMFINQIIPDNEG 483 (758)
T ss_dssp EEEEECCC--CBSSSEEEEEECTTSEEEEEESSSCEEEEEHHHHHHCCSS-EEECSEEEC-GGGTCSCSCEEEEEECTTS
T ss_pred EeecCCCcCCCCCceEEEEEEcCCCCEEEEECCCceEEEccccccccCCc-ceecccccc-cccccccceeeeEEEcCCC
Confidence 1111111 234578888888887666555666777774420 001 111 100 0111112347778888888
Q ss_pred CeEEEEecCCcEEEecCCCeEEEEEecCCCCCccCcceEEEEECCCCcEEEEEecCCeEEEEECCceee-ec--CCC-CC
Q psy12614 465 TLLLAVSLNGPLYIIDLSSLEIKYCVDPYKSNLMSDVISLVQMSECKQYIVCADRKSHVVIWKNGQHHA-SL--PRY-RK 540 (708)
Q Consensus 465 ~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~-~~--~~~-~~ 540 (708)
.+.+.++..+.|+.++..+.+.. .+.. .+......+.++....+|.+.+.. .. -+..|+..+... .+ .+. ..
T Consensus 484 ~lWi~~~t~~Gl~~~d~~~~~~~-~~~~-~~~~~~~~~~~i~~d~~g~lWigt-~~-Gl~~~~~~~~~~~~~~~~gl~~~ 559 (758)
T 3ott_A 484 NVWVLLYNNKGIDKINPRTREVT-KLFA-DELTGEKSPNYLLCDEDGLLWVGF-HG-GVMRINPKDESQQSISFGSFSNN 559 (758)
T ss_dssp CEEEEETTCSSEEEEETTTTEEE-EECT-TTSCGGGCEEEEEECTTSCEEEEE-TT-EEEEECC--CCCCBCCCCC---C
T ss_pred CEEEEccCCCCcEEEeCCCCceE-EecC-CCcCCCcccceEEECCCCCEEEEe-cC-ceEEEecCCCceEEecccCCCcc
Confidence 87663333333555544332322 2321 111003467888888888876654 44 477787663222 22 111 24
Q ss_pred CceEEEEcCCCCEEEEEecCCcEEEEEcCCCCCCchhhhhhccCchhhhcCCCCeeEEEeCCCCCceEEEEcCeeEEEEe
Q psy12614 541 PSTAMAIHPTLSTLVTVYSDHRIVEFDLNRKAFTTFSRKLETNHPNEWLSRQLPVLGIEFDPQDSSLIYLMDDSALCVIN 620 (708)
Q Consensus 541 ~v~~l~~s~d~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~~~~l~~~~~d~~i~~wd 620 (708)
.|.++... +|+ |-.++.+| |..||..+.+..... + ....+....+......|..++.+|- ..++
T Consensus 560 ~i~~i~~~-~g~-lWi~t~~G-l~~~~~~~~~~~~~~------~------~~~~~~~~~~~~~~G~l~fG~~~Gl-~~f~ 623 (758)
T 3ott_A 560 EILSMTCV-KNS-IWVSTTNG-LWIIDRKTMDARQQN------M------TNKRFTSLLFDPKEDCVYLGGADGF-GISH 623 (758)
T ss_dssp CEEEEEEE-TTE-EEEEESSC-EEEEETTTCCEEEC--------------CCCCCSEEEEETTTTEEEEECBSEE-EEEE
T ss_pred ceEEEEEC-CCC-EEEECCCC-eEEEcCCCceeEEec------C------CCCceeeeEEECCCCcEEEecCCce-EEEC
Confidence 57777764 554 55566666 888898876644110 1 1122333444433344777777885 4455
Q ss_pred cC
Q psy12614 621 KN 622 (708)
Q Consensus 621 ~~ 622 (708)
..
T Consensus 624 p~ 625 (758)
T 3ott_A 624 SN 625 (758)
T ss_dssp C-
T ss_pred hh
Confidence 54
|
| >1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A | Back alignment and structure |
|---|
Probab=98.99 E-value=1.4e-08 Score=103.43 Aligned_cols=215 Identities=10% Similarity=0.052 Sum_probs=153.3
Q ss_pred CCCCEEEEEeC-CCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe----CCEEEEEc------------------CCCc
Q psy12614 36 PKSSRLAVSRA-DQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF----NDRLFSGG------------------LQGF 92 (708)
Q Consensus 36 ~~~~~la~~~~-dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~----~~~l~s~~------------------~d~~ 92 (708)
+||++|.+... ++.|.+.|+.+.+... .+.-.. ...+..+++. ++++++++ .++.
T Consensus 99 ~DG~~lfVnd~~~~rVavIdl~t~~~~~-ii~ip~-g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~ 176 (595)
T 1fwx_A 99 YDGRFLFMNDKANTRVARVRCDVMKCDA-ILEIPN-AKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNV 176 (595)
T ss_dssp EEEEEEEEEETTTTEEEEEETTTTEEEE-EEECSS-CCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEE
T ss_pred cCCCEEEEEcCCCCEEEEEECCCceEee-EEeCCC-CCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCce
Confidence 38999888765 5569999999988765 333221 2568899983 88888874 3568
Q ss_pred EEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCC--------------------------------------c
Q psy12614 93 VNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQG--------------------------------------H 134 (708)
Q Consensus 93 i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~--------------------------------------~ 134 (708)
+.+.|.++.+...++..-. ....++++|||+++++.+.+. .
T Consensus 177 vtvID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~ 255 (595)
T 1fwx_A 177 FTAVDADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNG 255 (595)
T ss_dssp EEEEETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETT
T ss_pred EEEEECCCCeEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECc
Confidence 9999999999888887533 467789999999999888653 3
Q ss_pred EEEEEccC--CcE-EEEEecccccccEEEEEECCCCCEEEEecCC--eEEEEEcCCCc------------eEEEEEeccc
Q psy12614 135 INLFQISD--EGL-LYEKLLDRQQGRILCTAWHSSGDYLVTGCAA--AVRVWDIHKGH------------AIHKMSLDKS 197 (708)
Q Consensus 135 i~iwd~~~--~~~-~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d--~i~iwd~~~~~------------~~~~~~~~~~ 197 (708)
|.+.|..+ ++. + ..+. -.....++.++|||+++++++.. +|.++|+.+.+ ....+..
T Consensus 256 V~VID~~~~~~~~~~--~~Ip-vg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~v--- 329 (595)
T 1fwx_A 256 VKVVDGRKEASSLFT--RYIP-IANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPEL--- 329 (595)
T ss_dssp EEEEECSGGGCCSSE--EEEE-EESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBC---
T ss_pred EEEEeCcccCCceeE--EEEe-cCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCC---
Confidence 55556554 322 1 1111 12235678999999999888765 99999998653 2333332
Q ss_pred CCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCC----------CeeEEEeeccccCe-----EEEEEeCCCCEEEE
Q psy12614 198 SKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKT----------GVQWSDVKTHKKDI-----LALTVSEDENYLYC 261 (708)
Q Consensus 198 ~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~----------~~~~~~~~~~~~~i-----~~~~~s~~~~~l~~ 261 (708)
......++|+|+|. +++...+++|.+||+.+ .+.+.++..|..+- ..+.++|||++|++
T Consensus 330 -----G~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~ 404 (595)
T 1fwx_A 330 -----GLGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVC 404 (595)
T ss_dssp -----CSCEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEE
T ss_pred -----CCCcceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEE
Confidence 35578999999996 56777899999999877 55677776554321 22356899999998
Q ss_pred Eec
Q psy12614 262 AGV 264 (708)
Q Consensus 262 ~~~ 264 (708)
+..
T Consensus 405 ~Nk 407 (595)
T 1fwx_A 405 LSK 407 (595)
T ss_dssp EES
T ss_pred cCC
Confidence 764
|
| >1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1 | Back alignment and structure |
|---|
Probab=98.97 E-value=1.1e-06 Score=83.32 Aligned_cols=217 Identities=11% Similarity=-0.025 Sum_probs=142.8
Q ss_pred CcEEEEEEcCCCCEEEEEe-CCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEE-cCCCcEEEEECCCCe
Q psy12614 27 KVINCIACEPKSSRLAVSR-ADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSG-GLQGFVNEYDMRRLN 102 (708)
Q Consensus 27 ~~v~~~~~s~~~~~la~~~-~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~-~~d~~i~vwd~~~~~ 102 (708)
..+..++++|++..|..+. .++.|..++...+.... .+.... .....+++. ++.|+.+ ...+.|.+++++...
T Consensus 36 ~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~-~~~~~~--~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~ 112 (267)
T 1npe_A 36 KVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTT-IIRQDL--GSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQ 112 (267)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEE-EECTTC--CCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS
T ss_pred CcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEE-EEECCC--CCccEEEEEecCCeEEEEECCCCEEEEEEcCCCC
Confidence 3467999999776666554 56799999998765432 443333 578999998 5555544 567899999987543
Q ss_pred EeEEEeecCCceEEEEEecCCCEEEEEeC---CCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC--e
Q psy12614 103 IKSSTAVTSGTCWCLSVHKKKRLLAAGTE---QGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA--A 177 (708)
Q Consensus 103 ~~~~~~~~~~~v~~~~~s~~~~~la~~~~---d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d--~ 177 (708)
..............++++|++..|..+.. .+.|..+++...... ............++++|++..|+.+... .
T Consensus 113 ~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~--~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~ 190 (267)
T 1npe_A 113 RRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRR--ILAQDNLGLPNGLTFDAFSSQLCWVDAGTHR 190 (267)
T ss_dssp CEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCE--EEECTTCSCEEEEEEETTTTEEEEEETTTTE
T ss_pred EEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcE--EEEECCCCCCcEEEEcCCCCEEEEEECCCCE
Confidence 32222222256789999997776665554 368888888754432 1111223457899999998877666554 8
Q ss_pred EEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCeeEEEeeccc-cCeEEEEEeCC
Q psy12614 178 VRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDVKTHK-KDILALTVSED 255 (708)
Q Consensus 178 i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~~~~~-~~i~~~~~s~~ 255 (708)
|.++|........... . ......++.. ++. +++....+.|..+|..+++.+..+.... .....+++.|+
T Consensus 191 I~~~~~~g~~~~~~~~-~-------~~~P~gi~~d-~~~lyva~~~~~~v~~~d~~~g~~~~~i~~g~~~~p~gi~~~~~ 261 (267)
T 1npe_A 191 AECLNPAQPGRRKVLE-G-------LQYPFAVTSY-GKNLYYTDWKTNSVIAMDLAISKEMDTFHPHKQTRLYGITIALS 261 (267)
T ss_dssp EEEEETTEEEEEEEEE-C-------CCSEEEEEEE-TTEEEEEETTTTEEEEEETTTTEEEEEECCSSCCCCCCEEEECS
T ss_pred EEEEecCCCceEEEec-C-------CCCceEEEEe-CCEEEEEECCCCeEEEEeCCCCCceEEEccccccccceeeecCc
Confidence 9999987543332222 1 2233566655 455 4455567899999999999888876432 24678888887
Q ss_pred CC
Q psy12614 256 EN 257 (708)
Q Consensus 256 ~~ 257 (708)
+.
T Consensus 262 ~~ 263 (267)
T 1npe_A 262 QC 263 (267)
T ss_dssp CC
T ss_pred cC
Confidence 64
|
| >3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A | Back alignment and structure |
|---|
Probab=98.96 E-value=1.9e-07 Score=84.80 Aligned_cols=199 Identities=11% Similarity=0.101 Sum_probs=133.7
Q ss_pred eeeeeeeccCCCC--cEEEEEEcCCCCEEEEEeCCC--cEEEEeCCCCCeEEEEEecCCCCCcEEEEEEeCCEEEEEc-C
Q psy12614 15 GVHNIKFYAPEPK--VINCIACEPKSSRLAVSRADQ--SIEIWDISETPHVDRVFIGDPLSNSIECLTWFNDRLFSGG-L 89 (708)
Q Consensus 15 ~~~~~~~~~~h~~--~v~~~~~s~~~~~la~~~~dg--~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~~~~l~s~~-~ 89 (708)
..+-++.+ .|.. -...+.|+ ++.+..+.+.+| .|+++|+.+++.+...-.+.. ---..++..++.|..+. .
T Consensus 30 ~~~vv~~~-phd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~--~FgeGit~~g~~ly~ltw~ 105 (262)
T 3nol_A 30 DYQIVHSY-PHDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKR--YFGEGISDWKDKIVGLTWK 105 (262)
T ss_dssp EEEEEEEE-ECCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTT--CCEEEEEEETTEEEEEESS
T ss_pred ceEEEEEe-cCCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCc--cceeEEEEeCCEEEEEEee
Confidence 33344444 3443 35889998 666666666655 899999999998874332222 23455777766666554 6
Q ss_pred CCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEeccccc---ccEEEEEECCC
Q psy12614 90 QGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQ---GRILCTAWHSS 166 (708)
Q Consensus 90 d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~---~~v~~~~~s~d 166 (708)
++.+.++|.++.+.+.++.... ....+++|++.|+....++.|.++|..+.+........... ..++.+.|. +
T Consensus 106 ~~~v~v~D~~t~~~~~ti~~~~---eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~ 181 (262)
T 3nol_A 106 NGLGFVWNIRNLRQVRSFNYDG---EGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-D 181 (262)
T ss_dssp SSEEEEEETTTCCEEEEEECSS---CCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-T
T ss_pred CCEEEEEECccCcEEEEEECCC---CceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-C
Confidence 8999999999999999888533 22345567888877766788999999998877433332222 334567776 6
Q ss_pred CCEEEEecCC-eEEEEEcCCCceEEEEEecccCC-----CCCceeEEEEEEccCC-EEEEEc
Q psy12614 167 GDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSK-----FSKNTAVWCVAFCADF-TIITGD 221 (708)
Q Consensus 167 ~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~-----~~~~~~v~~~~~~~~~-~l~~~~ 221 (708)
|+..+..-.+ .|.+.|..+|+.+..+....-.. .......+.+||+|++ +|++.+
T Consensus 182 G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTG 243 (262)
T 3nol_A 182 GEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTG 243 (262)
T ss_dssp TEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEE
T ss_pred CEEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEEC
Confidence 7655544445 99999999999999998742100 0113467899999987 444444
|
| >3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=98.94 E-value=3.6e-07 Score=82.91 Aligned_cols=188 Identities=10% Similarity=0.005 Sum_probs=131.3
Q ss_pred cCCCCCcEEEEEEe-CCEEEEEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEE-EeCCCcEEEEEccCCc
Q psy12614 67 GDPLSNSIECLTWF-NDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAA-GTEQGHINLFQISDEG 144 (708)
Q Consensus 67 ~h~~~~~v~~l~~~-~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~-~~~d~~i~iwd~~~~~ 144 (708)
.|....-...|.|+ +...++.+.+|.|+++|+++++.+..+ - ..........++++.|.. .-.++.+.+||.++.+
T Consensus 50 phd~~~ftqGL~~~~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l-~~~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~Tl~ 127 (268)
T 3nok_A 50 PHATNAFTQGLVFHQGHFFESTGHQGTLRQLSLESAQPVWME-R-LGNIFAEGLASDGERLYQLTWTEGLLFTWSGMPPQ 127 (268)
T ss_dssp ECCTTCCEEEEEEETTEEEEEETTTTEEEECCSSCSSCSEEE-E-CTTCCEEEEEECSSCEEEEESSSCEEEEEETTTTE
T ss_pred cCCCccccceEEEECCEEEEEcCCCCEEEEEECCCCcEEeEE-C-CCCcceeEEEEeCCEEEEEEccCCEEEEEECCcCc
Confidence 44423556899999 656667788899999999999988887 3 334444333444555544 4468999999999999
Q ss_pred EEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEE-EEcC
Q psy12614 145 LLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTII-TGDS 222 (708)
Q Consensus 145 ~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~-~~~~ 222 (708)
.+......+. + ..++ +|++.|+.+..+ .|.++|..+.+.+.++.....+. .-..++.+.|. +|++. ....
T Consensus 128 ~~~ti~~~~e-G--wGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~--~v~~lNeLe~~-dG~lyanvw~ 199 (268)
T 3nok_A 128 RERTTRYSGE-G--WGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQ--PVELINELECA-NGVIYANIWH 199 (268)
T ss_dssp EEEEEECSSC-C--CCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTE--ECCCEEEEEEE-TTEEEEEETT
T ss_pred EEEEEeCCCc-e--eEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCc--ccccccccEEe-CCEEEEEECC
Confidence 8843333222 1 3333 568888777666 99999999999999988753111 01244667776 77744 4446
Q ss_pred CCcEEEEeCCCCeeEEEeecc-------------ccCeEEEEEeCCCCEEEEEec
Q psy12614 223 GGFVRFWDGKTGVQWSDVKTH-------------KKDILALTVSEDENYLYCAGV 264 (708)
Q Consensus 223 dg~i~~wd~~~~~~~~~~~~~-------------~~~i~~~~~s~~~~~l~~~~~ 264 (708)
+..|.+.|.++|+.+..+... ..-...++++|+++.|++.+.
T Consensus 200 s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK 254 (268)
T 3nok_A 200 SSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGK 254 (268)
T ss_dssp CSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEET
T ss_pred CCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCC
Confidence 789999999999998887532 135578999998877776654
|
| >3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A | Back alignment and structure |
|---|
Probab=98.94 E-value=7.3e-07 Score=81.01 Aligned_cols=192 Identities=12% Similarity=0.093 Sum_probs=132.3
Q ss_pred EEecCCCCCcEEEEEEe-CCEEEEEcCCC--cEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEe-CCCcEEEEE
Q psy12614 64 VFIGDPLSNSIECLTWF-NDRLFSGGLQG--FVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGT-EQGHINLFQ 139 (708)
Q Consensus 64 ~~~~h~~~~~v~~l~~~-~~~l~s~~~d~--~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~-~d~~i~iwd 139 (708)
.+ .|....-...|.|+ +..+.+.+.+| .|+++|+++++.+..+... .......+.++++.|.... .++.+.+||
T Consensus 36 ~~-phd~~~ftqGL~~~~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~-~~~FgeGit~~g~~ly~ltw~~~~v~v~D 113 (262)
T 3nol_A 36 SY-PHDTKAFTEGFFYRNGYFYESTGLNGRSSIRKVDIESGKTLQQIELG-KRYFGEGISDWKDKIVGLTWKNGLGFVWN 113 (262)
T ss_dssp EE-ECCTTCEEEEEEEETTEEEEEEEETTEEEEEEECTTTCCEEEEEECC-TTCCEEEEEEETTEEEEEESSSSEEEEEE
T ss_pred Ee-cCCCCcccceEEEECCEEEEECCCCCCceEEEEECCCCcEEEEEecC-CccceeEEEEeCCEEEEEEeeCCEEEEEE
Confidence 44 34423456889999 54555666665 8999999999998887643 3444443444555665554 588999999
Q ss_pred ccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEE-
Q psy12614 140 ISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTI- 217 (708)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l- 217 (708)
.++.+.+......+ .+ ..++ +|++.|+.+... .|.++|..+.+.+.++.....+. .-..++.+.|. +|++
T Consensus 114 ~~t~~~~~ti~~~~-eG--~glt--~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~--~~~~lNELe~~-~G~ly 185 (262)
T 3nol_A 114 IRNLRQVRSFNYDG-EG--WGLT--HNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGE--ELPELNELEWV-DGEIF 185 (262)
T ss_dssp TTTCCEEEEEECSS-CC--CCEE--ECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTE--ECCCEEEEEEE-TTEEE
T ss_pred CccCcEEEEEECCC-Cc--eEEe--cCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCc--cccccceeEEE-CCEEE
Confidence 99999874333332 12 2333 567777766656 99999999999999988753111 01334556776 7874
Q ss_pred EEEcCCCcEEEEeCCCCeeEEEeecc------------ccCeEEEEEeCCCCEEEEEecC
Q psy12614 218 ITGDSGGFVRFWDGKTGVQWSDVKTH------------KKDILALTVSEDENYLYCAGVD 265 (708)
Q Consensus 218 ~~~~~dg~i~~wd~~~~~~~~~~~~~------------~~~i~~~~~s~~~~~l~~~~~d 265 (708)
+....++.|.+.|.++|+.+..+... ..-...++|+|+++.|++.+..
T Consensus 186 an~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~ 245 (262)
T 3nol_A 186 ANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKL 245 (262)
T ss_dssp EEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETT
T ss_pred EEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCC
Confidence 44456889999999999998887532 1345889999999888877753
|
| >3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A | Back alignment and structure |
|---|
Probab=98.93 E-value=0.00017 Score=79.68 Aligned_cols=487 Identities=11% Similarity=0.073 Sum_probs=261.4
Q ss_pred CcEEEEEEe-CCEEEEEcCCCcEEEEECCCCeEeEEE-eecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEE
Q psy12614 72 NSIECLTWF-NDRLFSGGLQGFVNEYDMRRLNIKSST-AVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEK 149 (708)
Q Consensus 72 ~~v~~l~~~-~~~l~s~~~d~~i~vwd~~~~~~~~~~-~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~ 149 (708)
..|.+|.-. ..+|-.|+.+| +..||-..-+..... ......|.++....+| .|-+|+.+| +..||..+.... .
T Consensus 22 n~V~~I~qD~~G~lWigT~~G-L~ryDG~~~~~~~~~~~~~~~~i~~i~~d~~g-~lWigT~~G-l~~yd~~~~~f~--~ 96 (758)
T 3ott_A 22 SVVSCFLQDSEGLIWIGSNKG-LFSYDGYSTQQHFTYGENNNTRIYCGVIIDNT-YLYMGTDNG-ILVYNYRADRYE--Q 96 (758)
T ss_dssp CCEEEEEECTTSCEEEEESSC-EEEECSSCEEECSCTTSTTSSCEEEEEEETTT-EEEEEETTE-EEEEETTTTEEC--C
T ss_pred ceEEEEEECCCCCEEEEECCC-ccccCCCceEEEEccCCCCCceEEEEEEcCCC-cEEEEeCCC-eEEEeCCCCEEE--C
Confidence 678888887 66777777776 556663221111000 0123468888877776 455666655 789998877543 1
Q ss_pred ecccccccEEEEEECCCCCEEEEecCCeEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEEEEcCCCcEEEE
Q psy12614 150 LLDRQQGRILCTAWHSSGDYLVTGCAAAVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFW 229 (708)
Q Consensus 150 ~~~~~~~~v~~~~~s~d~~~l~~~~~d~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~w 229 (708)
........|.++.. .+| .|..++.+.+..+|..+++.. .+...... -....|.++...++|.+..++.+ -|..+
T Consensus 97 ~~~~~~~~i~~i~~-~~g-~lWigt~~Gl~~~~~~~~~~~-~~~~~~~~--l~~~~i~~i~~d~~g~lWigt~~-Gl~~~ 170 (758)
T 3ott_A 97 PETDFPTDVRTMAL-QGD-TLWLGALNGLYTYQLQSRKLT-SFDTRRNG--LPNNTIYSIIRTKDNQIYVGTYN-GLCRY 170 (758)
T ss_dssp CSCCCCSCEEEEEE-ETT-EEEEEETTEEEEEETTTCCEE-EECHHHHC--CSCSCEEEEEECTTCCEEEEETT-EEEEE
T ss_pred cccCCCceEEEEEe-cCC-cEEEEcCCcceeEeCCCCeEE-EeccCCCC--cCCCeEEEEEEcCCCCEEEEeCC-CHhhC
Confidence 11112345777654 355 455555558888998766543 23111000 11356888888888887667654 48888
Q ss_pred eCCCCeeEEEe-ec----cccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccc
Q psy12614 230 DGKTGVQWSDV-KT----HKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGD 304 (708)
Q Consensus 230 d~~~~~~~~~~-~~----~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 304 (708)
+..+++..... .. ....|.++...+++..|..|+. +-+..++..+ ++ +.....+ ....
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~--------~~------~~~~~~l--~~~~ 233 (758)
T 3ott_A 171 IPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFPST--------GQ------IKQTEAF--HNNS 233 (758)
T ss_dssp ETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EEEEEEETTT--------TE------EEEEEEE--EEEE
T ss_pred ccCCCceEEecCCCccccccceeEEEEEECCCCEEEEEEC-CCCeEEcCCC--------Ce------EEeccCC--CCCe
Confidence 88766543221 11 1224788888887776666664 4688888766 32 1111111 2345
Q ss_pred eEEEEEe-CCEEEEEcCCCeEEEEeCCCCceeecCcc------C--CCCceEEEEcCCcEEEEEcCCeEEEEEecCCCCC
Q psy12614 305 VKSLALH-GNRLYSGGLDSYLSLSYYPPKTLVKYPCT------L--AQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQST 375 (708)
Q Consensus 305 v~~l~~~-~~~l~s~~~d~~i~iw~~~~~~~~~~~~~------~--~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~~ 375 (708)
|.++... ...|..|+. +-+.+++..+..+..+... . ..+.++....+|.+-+....+ +.++......
T Consensus 234 i~~i~~d~~g~lWigT~-~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWiGT~~G-l~~~~~~~~~-- 309 (758)
T 3ott_A 234 IKSLALDGNGDLLAGTD-NGLYVYHNDTTPLQHIIHDSRNIQSLTNNIIWNIFADQEHNIWLGTDYG-ISLSRYNSAL-- 309 (758)
T ss_dssp EEEEEECTTCCEEEEET-TEEEEECCTTSCCEEECCCTTCTTSCSCSCEEEEEECTTCCEEEEESSS-EEEECCCC-C--
T ss_pred EEEEEEcCCCCEEEEeC-CceeEEecCCCcEEEEEcCCCCcCcCCcCeEEEEEEcCCCCEEEEeCCc-ccccccCCce--
Confidence 7788777 555666664 4577888877654433211 1 122345556677776666554 4443321100
Q ss_pred CCCCCCCCCcccCCCCceEEEEEE----ecCCCceEEEEeCCCCcEEEEEcCCceEEEEEEecCCcceeEEeecCC--cc
Q psy12614 376 DLSSHSNTTGVPLLSFPRLIVKMS----AVNNATIRCSVVSNDGKYVAYSTESCVRLHSLDLDGDKPQISRIKNLP--AP 449 (708)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~i~~~~~s~~g~~l~~~~d~~i~i~~~~~~~~~~~~~~~~~~~--~~ 449 (708)
...... ......|.++....+|.+.+...+ .+..++...+.. ..+.....-. ..
T Consensus 310 ------------------~~~~~~~~~~~~~~~~v~~i~~D~~g~lWiGt~~-Gl~~~~~~~~~~-~~~~~~~~~~~~~~ 369 (758)
T 3ott_A 310 ------------------QFIPISQITGTGDGNQFYSLFRDSKGFYWFGGAN-GLIRFTDPAGER-HDAIWYRMGDKTYP 369 (758)
T ss_dssp ------------------EEEEHHHHSCSCCCCBEEEEEECTTCCEEEEETT-EEEEESCTTSSC-CCCEEECTTCSSSC
T ss_pred ------------------eEEecccCCCCCCCceEEEEEEcCCCCEEEeeCC-cceeeccccccc-ceeEEeccCCcCCC
Confidence 111100 012346888888888876665444 444444322110 0111111000 01
Q ss_pred cccceeEEEEEecCCCeEEEEecCCc-EEEecCCCeEEEEEecCCCCCccCcceEEEEECCCCcEEEEEecCCeEEEEEC
Q psy12614 450 LFKSIFTHVLISADSTLLLAVSLNGP-LYIIDLSSLEIKYCVDPYKSNLMSDVISLVQMSECKQYIVCADRKSHVVIWKN 528 (708)
Q Consensus 450 ~~~~~i~~~~~s~d~~~l~~~~~dg~-i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~ 528 (708)
.....|.++.-..+|.+-+ |+.+|. .++..++..+....... .+......|.++...++|++.+ |+..+-+.+++.
T Consensus 370 l~~~~v~~i~~d~~g~lWi-gt~~GL~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~i~~d~~g~lWi-gT~~~Gl~~~~~ 446 (758)
T 3ott_A 370 LSHNRIRHIYEDKEQQLWI-ATDGSINRYDYATRQFIHYNIVDN-TGTYNTNWTYYIFEDTAGQLWI-STCLGGIFVVDK 446 (758)
T ss_dssp CSCSCEEEEEECTTSCEEE-EETTEEEEEETTTTEEEEEEEECC-C--CBSSSEEEEEECTTSEEEE-EESSSCEEEEEH
T ss_pred CCCCceEEEEECCCCCEEE-EeCCcHhhcCcCCCcEEEeecCCC-cCCCCCceEEEEEEcCCCCEEE-EECCCceEEEcc
Confidence 1123577777777777655 444443 44444442222221111 1100134688888888876554 555566788875
Q ss_pred Cce-------e---eec---CC-CCCCceEEEEcCCCCEEEEEecCCcEEEEEcCCCCCCchhhhhhccCchhhhcCCCC
Q psy12614 529 GQH-------H---ASL---PR-YRKPSTAMAIHPTLSTLVTVYSDHRIVEFDLNRKAFTTFSRKLETNHPNEWLSRQLP 594 (708)
Q Consensus 529 ~~~-------~---~~~---~~-~~~~v~~l~~s~d~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (708)
.+. . ..+ .+ ....|.++...++|++.+.++..+-|..+|..+++..... .... .....
T Consensus 447 ~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~~~t~~Gl~~~d~~~~~~~~~~-------~~~~-~~~~~ 518 (758)
T 3ott_A 447 HKLMQSTSGQYIAEQNYSVHNGLSGMFINQIIPDNEGNVWVLLYNNKGIDKINPRTREVTKLF-------ADEL-TGEKS 518 (758)
T ss_dssp HHHHHCCSSEEECSEEECGGGTCSCSCEEEEEECTTSCEEEEETTCSSEEEEETTTTEEEEEC-------TTTS-CGGGC
T ss_pred ccccccCCcceecccccccccccccceeeeEEEcCCCCEEEEccCCCCcEEEeCCCCceEEec-------CCCc-CCCcc
Confidence 421 1 011 11 1235888999888887664444455888998876644110 0001 11245
Q ss_pred eeEEEeCCCCCceEEEEcCeeEEEEecCC
Q psy12614 595 VLGIEFDPQDSSLIYLMDDSALCVINKNK 623 (708)
Q Consensus 595 i~~l~~s~~~~~l~~~~~d~~i~~wd~~~ 623 (708)
+.++....+|...+ ++..| |..+|...
T Consensus 519 ~~~i~~d~~g~lWi-gt~~G-l~~~~~~~ 545 (758)
T 3ott_A 519 PNYLLCDEDGLLWV-GFHGG-VMRINPKD 545 (758)
T ss_dssp EEEEEECTTSCEEE-EETTE-EEEECC--
T ss_pred cceEEECCCCCEEE-EecCc-eEEEecCC
Confidence 77888888887554 44454 78887643
|
| >1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1 | Back alignment and structure |
|---|
Probab=98.93 E-value=2.3e-06 Score=90.15 Aligned_cols=301 Identities=15% Similarity=0.180 Sum_probs=182.2
Q ss_pred CCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCc--------EEEEEEeCCEEEEEcCCCcEEEEECCCCeEeEEEee
Q psy12614 38 SSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNS--------IECLTWFNDRLFSGGLQGFVNEYDMRRLNIKSSTAV 109 (708)
Q Consensus 38 ~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~--------v~~l~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~ 109 (708)
+..|.+++.++.|.-+|..+|+.+= .+.... ... -..+++.++.++.++.|+.|..+|.++|+.+.....
T Consensus 68 ~g~vyv~~~~~~v~AlD~~tG~~~W-~~~~~~-~~~~~~~~~~~~~g~a~~~~~v~~~t~dg~l~AlD~~TG~~~W~~~~ 145 (582)
T 1flg_A 68 DGVIYVTASYSRLFALDAKTGKRLW-TYNHRL-PDDIRPCCDVVNRGAAIYGDKVFFGTLDASVVALNKNTGKVVWKKKF 145 (582)
T ss_dssp TTEEEEEETTTEEEEEESSSCCEEE-EEECCC-CTTCCCSSCSCCCCCEEETTEEEEEETTTEEEEEESSSCCEEEEEEC
T ss_pred CCEEEEEcCCCCEEEEECCCCcEEE-EEcCCC-CcccccccccCCCccEEECCEEEEEeCCCEEEEEECCCCCEEeeecC
Confidence 4456666664459999999998865 333221 010 123445588899999999999999999999887664
Q ss_pred cCC----ceE-EEEEec---CCC-EEEEEeC------CCcEEEEEccCCcEEEEEeccc-c----cc-------------
Q psy12614 110 TSG----TCW-CLSVHK---KKR-LLAAGTE------QGHINLFQISDEGLLYEKLLDR-Q----QG------------- 156 (708)
Q Consensus 110 ~~~----~v~-~~~~s~---~~~-~la~~~~------d~~i~iwd~~~~~~~~~~~~~~-~----~~------------- 156 (708)
... .+. +..+.. +|+ .+++++. ++.|+-+|..+|+.+....... + .+
T Consensus 146 ~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~~~~~~~~~p~~~~~~~~~g~~g~~~ 225 (582)
T 1flg_A 146 ADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRPFVEGHMGRLNGKDSTVTGDVKAPS 225 (582)
T ss_dssp SCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEEESSTTCEEEETTEEEEESSCTTCTT
T ss_pred CCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeecCCCccccccccCccccccccccccc
Confidence 321 111 111222 233 5666542 7899999999999876443210 0 00
Q ss_pred ---------------------cEEEEEECCCCCEEEEecC-------------------------CeEEEEEcCCCceEE
Q psy12614 157 ---------------------RILCTAWHSSGDYLVTGCA-------------------------AAVRVWDIHKGHAIH 190 (708)
Q Consensus 157 ---------------------~v~~~~~s~d~~~l~~~~~-------------------------d~i~iwd~~~~~~~~ 190 (708)
.-..+++.|+...++.+.. ..|..+|..+|+.+.
T Consensus 226 w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W 305 (582)
T 1flg_A 226 WPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVKW 305 (582)
T ss_dssp SCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCEEE
T ss_pred CCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCCCCEEE
Confidence 0013456677677765542 269999999999998
Q ss_pred EEEecccCC--C-CCceeEEEEEEc-cCC----EEEEEcCCCcEEEEeCCCCeeEEEeeccc-------------cC---
Q psy12614 191 KMSLDKSSK--F-SKNTAVWCVAFC-ADF----TIITGDSGGFVRFWDGKTGVQWSDVKTHK-------------KD--- 246 (708)
Q Consensus 191 ~~~~~~~~~--~-~~~~~v~~~~~~-~~~----~l~~~~~dg~i~~wd~~~~~~~~~~~~~~-------------~~--- 246 (708)
.+....... + ....++. +... .+| .++.++.+|.++++|.++|+.+....... .+
T Consensus 306 ~~q~~~~d~wd~~~~~~p~l-~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~ 384 (582)
T 1flg_A 306 FYQHTPNDAWDFSGNNELVL-FDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNITWASHIDLKTGRPVER 384 (582)
T ss_dssp EEESSTTCCSCCCCCCCCEE-EEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCCSEEEECTTTCCEEEC
T ss_pred EEeCCCCCcccccCCCCcEE-EeeecCCCCEEEEEEEECCCceEEEEECCCCCEecccccccCccccccccccCCCEeEc
Confidence 887542100 0 0011222 1221 466 26788999999999999999876654321 00
Q ss_pred -----------------------------eEEEEEeCCCCEEEEEe---------------------------------c
Q psy12614 247 -----------------------------ILALTVSEDENYLYCAG---------------------------------V 264 (708)
Q Consensus 247 -----------------------------i~~~~~s~~~~~l~~~~---------------------------------~ 264 (708)
-..++++|+..++++.. .
T Consensus 385 ~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~p~~~~~ 464 (582)
T 1flg_A 385 EGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAYLGMGFRIKRMYDDH 464 (582)
T ss_dssp TTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEESCSSC
T ss_pred cccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcceeeecccccccCCCceeccceeecCCCCCC
Confidence 01356777666665543 2
Q ss_pred CCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceE--EEEEeCCEEEEEcCCCeEEEEeCCCCc-eeecCcc-
Q psy12614 265 DPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVK--SLALHGNRLYSGGLDSYLSLSYYPPKT-LVKYPCT- 340 (708)
Q Consensus 265 dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~--~l~~~~~~l~s~~~d~~i~iw~~~~~~-~~~~~~~- 340 (708)
+|.|.-||+.+ |+ ..|... .. ..+. .+...+.+++.++.|+.++.+|.++++ +.++..+
T Consensus 465 ~G~l~A~D~~t--------G~----~~W~~~----~~-~~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~~~~~ 527 (582)
T 1flg_A 465 VGSLRAMDPVS--------GK----VVWEHK----EH-LPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGS 527 (582)
T ss_dssp SEEEEEECTTT--------CC----EEEEEE----ES-SCCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSS
T ss_pred cceEEEEECCC--------CC----EEEEec----CC-CCCcccceEeCCCEEEEECCCCcEEEEECCCCCEEEEecCCC
Confidence 57788888888 65 334322 11 1221 223338889999999999999998877 3333312
Q ss_pred CCCCceEEEEcCCcEEEE
Q psy12614 341 LAQSTPVSLAKDIQHVLL 358 (708)
Q Consensus 341 ~~~~~~~~~s~~~~~l~~ 358 (708)
......+.+..+|+..++
T Consensus 528 g~~a~P~~y~~~G~qYv~ 545 (582)
T 1flg_A 528 GIVSPPITWEQDGEQYLG 545 (582)
T ss_dssp CCCSCCEEEEETTEEEEE
T ss_pred CcccCceEEEECCEEEEE
Confidence 223345777788875554
|
| >3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=98.92 E-value=3.4e-07 Score=83.04 Aligned_cols=186 Identities=9% Similarity=-0.019 Sum_probs=130.0
Q ss_pred CcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEeCCE-EEEEcCCCcEEEEECCCCeEeE
Q psy12614 27 KVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWFNDR-LFSGGLQGFVNEYDMRRLNIKS 105 (708)
Q Consensus 27 ~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~~~~-l~s~~~d~~i~vwd~~~~~~~~ 105 (708)
.-...+.|+. +.+.++.+.+|.|+++|+.+++.+... .+.. .--..+++.++. .+..-.++.+.++|.++.+.+.
T Consensus 55 ~ftqGL~~~~-~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~--~FgeGit~~g~~Ly~ltw~~~~v~V~D~~Tl~~~~ 130 (268)
T 3nok_A 55 AFTQGLVFHQ-GHFFESTGHQGTLRQLSLESAQPVWME-RLGN--IFAEGLASDGERLYQLTWTEGLLFTWSGMPPQRER 130 (268)
T ss_dssp CCEEEEEEET-TEEEEEETTTTEEEECCSSCSSCSEEE-ECTT--CCEEEEEECSSCEEEEESSSCEEEEEETTTTEEEE
T ss_pred cccceEEEEC-CEEEEEcCCCCEEEEEECCCCcEEeEE-CCCC--cceeEEEEeCCEEEEEEccCCEEEEEECCcCcEEE
Confidence 3347888874 455666677889999999999988755 3222 233557777444 4455578999999999999999
Q ss_pred EEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccc---cEEEEEECCCCCEEEEecCC-eEEEE
Q psy12614 106 STAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQG---RILCTAWHSSGDYLVTGCAA-AVRVW 181 (708)
Q Consensus 106 ~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~---~v~~~~~s~d~~~l~~~~~d-~i~iw 181 (708)
++..... =+ .+++|++.|+.+..++.|.++|.++.+.........+.. .++.+.|. +|+..+..-.+ .|.+.
T Consensus 131 ti~~~~e-Gw--GLt~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s~~I~vI 206 (268)
T 3nok_A 131 TTRYSGE-GW--GLCYWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYANIWHSSDVLEI 206 (268)
T ss_dssp EEECSSC-CC--CEEEETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTCSEEEEE
T ss_pred EEeCCCc-ee--EEecCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEEECCCCeEEEE
Confidence 9885322 23 344678888887778999999999988874333333332 34667776 77555544445 99999
Q ss_pred EcCCCceEEEEEeccc-------CCCCCceeEEEEEEccCC-EEEEEc
Q psy12614 182 DIHKGHAIHKMSLDKS-------SKFSKNTAVWCVAFCADF-TIITGD 221 (708)
Q Consensus 182 d~~~~~~~~~~~~~~~-------~~~~~~~~v~~~~~~~~~-~l~~~~ 221 (708)
|..+|+.+..+....- .. ......+.||+.|++ +|++.+
T Consensus 207 Dp~TG~V~~~Idl~~L~~~~~~~~~-~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 207 DPATGTVVGVIDASALTRAVAGQVT-NPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp CTTTCBEEEEEECHHHHHHHTTTCC-CTTCCEEEEEECTTTCCEEEEE
T ss_pred eCCCCcEEEEEECCCCccccccccc-CcCCceEEEEEcCCCCEEEEeC
Confidence 9999999999987520 01 124567999999987 444433
|
| >2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A* | Back alignment and structure |
|---|
Probab=98.92 E-value=8.7e-07 Score=81.73 Aligned_cols=194 Identities=9% Similarity=0.041 Sum_probs=136.0
Q ss_pred cEEEEEEe-CCEEEEEcC---CCcEEEEECCCCeEeEEEeecCC-ceEEEEEecCCCEEEEEe-CCCcEEEEEccCCcEE
Q psy12614 73 SIECLTWF-NDRLFSGGL---QGFVNEYDMRRLNIKSSTAVTSG-TCWCLSVHKKKRLLAAGT-EQGHINLFQISDEGLL 146 (708)
Q Consensus 73 ~v~~l~~~-~~~l~s~~~---d~~i~vwd~~~~~~~~~~~~~~~-~v~~~~~s~~~~~la~~~-~d~~i~iwd~~~~~~~ 146 (708)
....++|+ .+.|+.++. ++.|.+.|+.+++.+..+..... ....+++. ++.|..+. .++.+.++|..+.+.+
T Consensus 22 f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~~v~viD~~t~~v~ 99 (266)
T 2iwa_A 22 FTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKNIGFIYDRRTLSNI 99 (266)
T ss_dssp CEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTCSEEEEEETTTTEEE
T ss_pred CcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecCCEEEEEECCCCcEE
Confidence 46899999 356666542 68999999999999888763221 22345554 55555544 5789999999998887
Q ss_pred EEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEE-EEEcCCC
Q psy12614 147 YEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTI-ITGDSGG 224 (708)
Q Consensus 147 ~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l-~~~~~dg 224 (708)
...... ... ...+++||+.|+++..+ .|.++|..+.+.+..+.....+. .-..++.+.|. +|++ +....++
T Consensus 100 ~~i~~g-~~~---g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~--p~~~~nele~~-dg~lyvn~~~~~ 172 (266)
T 2iwa_A 100 KNFTHQ-MKD---GWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGH--RVIRLNELEYI-NGEVWANIWQTD 172 (266)
T ss_dssp EEEECC-SSS---CCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTE--ECCCEEEEEEE-TTEEEEEETTSS
T ss_pred EEEECC-CCC---eEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCc--ccccceeEEEE-CCEEEEecCCCC
Confidence 332222 111 12345678777776666 99999999999999988753110 01236778888 7874 4555678
Q ss_pred cEEEEeCCCCeeEEEeeccc-------------cCeEEEEEeCCCCEEEEEe-cCCeEEEEEccC
Q psy12614 225 FVRFWDGKTGVQWSDVKTHK-------------KDILALTVSEDENYLYCAG-VDPTVVCFQRTR 275 (708)
Q Consensus 225 ~i~~wd~~~~~~~~~~~~~~-------------~~i~~~~~s~~~~~l~~~~-~dg~i~iw~~~~ 275 (708)
.|.+.|..+++.+..+.... .....++|+|+++++++++ ..+.+...++..
T Consensus 173 ~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~ 237 (266)
T 2iwa_A 173 CIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHL 237 (266)
T ss_dssp EEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEE
T ss_pred eEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEec
Confidence 99999999999988886321 3558999999987666555 578888888876
|
| >1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A | Back alignment and structure |
|---|
Probab=98.90 E-value=5e-07 Score=92.15 Aligned_cols=261 Identities=13% Similarity=0.023 Sum_probs=168.9
Q ss_pred EEEEcCCCcEEEEECCCCeEeEEEeec---------------------------------C------CceEEEEEec---
Q psy12614 84 LFSGGLQGFVNEYDMRRLNIKSSTAVT---------------------------------S------GTCWCLSVHK--- 121 (708)
Q Consensus 84 l~s~~~d~~i~vwd~~~~~~~~~~~~~---------------------------------~------~~v~~~~~s~--- 121 (708)
+.||+..|.++|+-+.+++.+..+... . +.....+.|.
T Consensus 18 f~s~g~~g~~~v~g~ps~r~~~~i~vf~~~~~~g~g~~~es~~~l~~~~~~~~~~~~~~~g~~~~~~gd~hh~~~s~t~g 97 (595)
T 1fwx_A 18 FWSSGQSGEMRILGIPSMRELMRVPVFNRCSATGWGQTNESVRIHERTMSERTKKFLAANGKRIHDNGDLHHVHMSFTEG 97 (595)
T ss_dssp EECCBTTCEEEEEEETTCCEEEEEESSSCCTTTCTTTBHHHHHHHHTTCCHHHHHHHHHTTCSSCCCCCBCCEEEEEETT
T ss_pred EeeCCcCceEEEEecCCcceEEEeeeecCCCCcccCCchhHHHHHhccCCccchhhhhccCceecccCCCCccccCCCCC
Confidence 567889999999999998876665311 1 2223456665
Q ss_pred --CCCEEEEEeC-CCcEEEEEccCCcEEEEEecccccccEEEEEE-C-CCCCEEEEec-----------------C-C-e
Q psy12614 122 --KKRLLAAGTE-QGHINLFQISDEGLLYEKLLDRQQGRILCTAW-H-SSGDYLVTGC-----------------A-A-A 177 (708)
Q Consensus 122 --~~~~la~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~-s-~d~~~l~~~~-----------------~-d-~ 177 (708)
||++|.+... ++.|.+.|+.+.+......+.. ......+++ + |+++++++++ . + .
T Consensus 98 ~~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~-g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~ 176 (595)
T 1fwx_A 98 KYDGRFLFMNDKANTRVARVRCDVMKCDAILEIPN-AKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNV 176 (595)
T ss_dssp EEEEEEEEEEETTTTEEEEEETTTTEEEEEEECSS-CCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEE
T ss_pred CcCCCEEEEEcCCCCEEEEEECCCceEeeEEeCCC-CCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCce
Confidence 8888887665 5569999999998763223332 244778887 5 9999998884 2 2 7
Q ss_pred EEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCC---------------------------------
Q psy12614 178 VRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSG--------------------------------- 223 (708)
Q Consensus 178 i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~d--------------------------------- 223 (708)
+.++|..+.+...++..+. ....++++|||+ +++.+.+
T Consensus 177 vtvID~~t~~v~~qI~Vgg--------~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~G 248 (595)
T 1fwx_A 177 FTAVDADKWEVAWQVLVSG--------NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAG 248 (595)
T ss_dssp EEEEETTTTEEEEEEEESS--------CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHT
T ss_pred EEEEECCCCeEEEEEEeCC--------CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCC
Confidence 9999999999999988752 234567888885 3333322
Q ss_pred -----CcEEEEeCCC--Cee-EEEeeccccCeEEEEEeCCCCEEEEEe-cCCeEEEEEccCCcccccCCCCCCCCcceEE
Q psy12614 224 -----GFVRFWDGKT--GVQ-WSDVKTHKKDILALTVSEDENYLYCAG-VDPTVVCFQRTRKPQVCSTSGPEQGSSVWVR 294 (708)
Q Consensus 224 -----g~i~~wd~~~--~~~-~~~~~~~~~~i~~~~~s~~~~~l~~~~-~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~ 294 (708)
+.|.+.|..+ ++. +..+.. .....++.++|||+++++++ .+..+.++|+.+.... ..++ ...... .
T Consensus 249 k~~~i~~V~VID~~~~~~~~~~~~Ipv-g~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~--~~~~-l~~~~~-v 323 (595)
T 1fwx_A 249 DYQELNGVKVVDGRKEASSLFTRYIPI-ANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAV--FYEN-ADPRSA-V 323 (595)
T ss_dssp CSEEETTEEEEECSGGGCCSSEEEEEE-ESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHH--HHSC-CCGGGG-E
T ss_pred CeeEECcEEEEeCcccCCceeEEEEec-CCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccc--cccc-cCcccc-e
Confidence 2477888877 544 555543 34557899999999888776 4679999999861000 0000 000000 1
Q ss_pred eEEEeccccceEEEEEe--CCEEEEEcCCCeEEEEeCCC----------Cc-eeecCccCC-----CCceEEEEcCCcEE
Q psy12614 295 SVNRVIHEGDVKSLALH--GNRLYSGGLDSYLSLSYYPP----------KT-LVKYPCTLA-----QSTPVSLAKDIQHV 356 (708)
Q Consensus 295 ~~~~~~~~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~----------~~-~~~~~~~~~-----~~~~~~~s~~~~~l 356 (708)
... ..-......++|+ |...++.-.|+.|..|+++. .. +.++..+.. ......++|||++|
T Consensus 324 ~~~-v~vG~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l 402 (595)
T 1fwx_A 324 VAE-PELGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWL 402 (595)
T ss_dssp EEC-CBCCSCEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEE
T ss_pred EEE-cCCCCCcceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEE
Confidence 111 1223457788898 64455677899999999876 22 333331111 11334568999999
Q ss_pred EEE
Q psy12614 357 LLQ 359 (708)
Q Consensus 357 ~~~ 359 (708)
++.
T Consensus 403 ~~~ 405 (595)
T 1fwx_A 403 VCL 405 (595)
T ss_dssp EEE
T ss_pred EEc
Confidence 985
|
| >2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A* | Back alignment and structure |
|---|
Probab=98.90 E-value=1.1e-06 Score=85.95 Aligned_cols=235 Identities=9% Similarity=0.015 Sum_probs=149.8
Q ss_pred cEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecC-C---------------CCCcEEEEEEe--CCEEEEEcC
Q psy12614 28 VINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGD-P---------------LSNSIECLTWF--NDRLFSGGL 89 (708)
Q Consensus 28 ~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h-~---------------~~~~v~~l~~~--~~~l~s~~~ 89 (708)
...+++++++|+++.++..++.|..||..++.......... . ....+.++++. +..|+.+..
T Consensus 20 ~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d~ 99 (322)
T 2fp8_A 20 APNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVDC 99 (322)
T ss_dssp CCCCEECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEET
T ss_pred CceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEEC
Confidence 35578899999988888889999999988765432111110 0 00357889998 567777766
Q ss_pred CCcEEEEECCCCeEeEEEe----ecCCceEEEEEec-CCCEEEEEeC-----------------CCcEEEEEccCCcEEE
Q psy12614 90 QGFVNEYDMRRLNIKSSTA----VTSGTCWCLSVHK-KKRLLAAGTE-----------------QGHINLFQISDEGLLY 147 (708)
Q Consensus 90 d~~i~vwd~~~~~~~~~~~----~~~~~v~~~~~s~-~~~~la~~~~-----------------d~~i~iwd~~~~~~~~ 147 (708)
.+.|..+|..++....... ........+++.+ +|+..++-.. ++.|..||..+++...
T Consensus 100 ~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~ 179 (322)
T 2fp8_A 100 YYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTL 179 (322)
T ss_dssp TTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEE
T ss_pred CCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEE
Confidence 6668899987654322111 1123578899999 9986665422 3678888887776531
Q ss_pred EEecccccccEEEEEECCCCCEEEEe-cCC-eEEEEEcCCCc--eEEEEEecccCCCCCceeEEEEEEccCCEEEEEcC-
Q psy12614 148 EKLLDRQQGRILCTAWHSSGDYLVTG-CAA-AVRVWDIHKGH--AIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDS- 222 (708)
Q Consensus 148 ~~~~~~~~~~v~~~~~s~d~~~l~~~-~~d-~i~iwd~~~~~--~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~- 222 (708)
.. ........++|+|+++.|+.+ ..+ .|.++++.... ....+... .. ...+++.++|++.++..
T Consensus 180 --~~-~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~-------~g-P~gi~~d~~G~l~va~~~ 248 (322)
T 2fp8_A 180 --LL-KELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKI-------PN-PGNIKRNADGHFWVSSSE 248 (322)
T ss_dssp --EE-EEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEEC-------SS-EEEEEECTTSCEEEEEEE
T ss_pred --ec-cCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeC-------CC-CCCeEECCCCCEEEEecC
Confidence 11 112234678999999876655 444 89999987532 11222211 23 67889999997544433
Q ss_pred ----------CCcEEEEeCCCCeeEEEeeccc----cCeEEEEEeCCCCEEEEEecCCeEEEEEccC
Q psy12614 223 ----------GGFVRFWDGKTGVQWSDVKTHK----KDILALTVSEDENYLYCAGVDPTVVCFQRTR 275 (708)
Q Consensus 223 ----------dg~i~~wd~~~~~~~~~~~~~~----~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~ 275 (708)
.+.|..+|. .++.+..+.... ..+.++++ .++++.++....+.|..+++..
T Consensus 249 ~~~~~~~~~~~~~v~~~d~-~G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~~~~~~ 313 (322)
T 2fp8_A 249 ELDGNMHGRVDPKGIKFDE-FGNILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGSVGILVYDK 313 (322)
T ss_dssp ETTSSTTSCEEEEEEEECT-TSCEEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSEEEEEEC--
T ss_pred cccccccCCCccEEEEECC-CCCEEEEEECCCCCccccceEEEE-eCCEEEEeecCCCceEEEeccc
Confidence 367889986 477777665432 34666766 4555555555678899998865
|
| >3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ... | Back alignment and structure |
|---|
Probab=98.90 E-value=0.00028 Score=80.09 Aligned_cols=393 Identities=9% Similarity=0.072 Sum_probs=215.2
Q ss_pred CcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--------CCEEEEEcC-CCcEEEEE
Q psy12614 27 KVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--------NDRLFSGGL-QGFVNEYD 97 (708)
Q Consensus 27 ~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--------~~~l~s~~~-d~~i~vwd 97 (708)
..|.+.+.+. .+++.+. ++.+.++++..+.... .....+...|.|+++. ++++++|.. |++++|++
T Consensus 514 ~~I~~As~n~--~~vvva~-g~~l~~fel~~~~L~~--~~~~~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~s 588 (1158)
T 3ei3_A 514 KNISVASCNS--SQVVVAV-GRALYYLQIHPQELRQ--ISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILK 588 (1158)
T ss_dssp CCCCEEEECS--SEEEEEE-TTEEEEEEEETTEEEE--EEEEECSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEE
T ss_pred CEEEEEEeCC--CEEEEEE-CCEEEEEEeeCCceee--ecccCCCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEE
Confidence 3466666553 4666665 5788888887654322 1112234789999987 368999986 99999999
Q ss_pred CCCCeEeEEEeec-CCceEEEEEec--CCCEEEEEeCCCcEEEEEcc--CCcEEEEE-ecccccccEEEEEECCCCC-EE
Q psy12614 98 MRRLNIKSSTAVT-SGTCWCLSVHK--KKRLLAAGTEQGHINLFQIS--DEGLLYEK-LLDRQQGRILCTAWHSSGD-YL 170 (708)
Q Consensus 98 ~~~~~~~~~~~~~-~~~v~~~~~s~--~~~~la~~~~d~~i~iwd~~--~~~~~~~~-~~~~~~~~v~~~~~s~d~~-~l 170 (708)
+.+.+.+....-. .....++.+.. ...+|..|-.||.+.-+.++ ++++...+ .+-+ ..++.-..|...+. .+
T Consensus 589 L~~l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~l~~~~~d~~tg~l~d~r~~~LG-~~pv~L~~~~~~~~~~V 667 (1158)
T 3ei3_A 589 LPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKKVTLG-TQPTVLRTFRSLSTTNV 667 (1158)
T ss_dssp TTTCCEEEEEECCSSCCEEEEEEEEETTEEEEEEEETTSEEEEEEECTTTCCEEEEEEEECC-SSCCEEEEEESSSCEEE
T ss_pred CCCCCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCeEEEEEEcCCCCccccceeEEcC-CCceEEEEEeeCCceeE
Confidence 9987766543321 12344444432 34578889999998766654 55554322 2222 23444444433343 34
Q ss_pred EEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCC---EEEEEcCCCcEEEEeCCCCe--eEEEeeccc
Q psy12614 171 VTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADF---TIITGDSGGFVRFWDGKTGV--QWSDVKTHK 244 (708)
Q Consensus 171 ~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---~l~~~~~dg~i~~wd~~~~~--~~~~~~~~~ 244 (708)
++++.. .+. +.- .++.... ... ....-....|+... -++..+ ++.++|..+...+ .+++++ -.
T Consensus 668 ~a~s~rp~li-y~~-~~~l~~s-~l~------~~~v~~~~~F~se~~~~g~v~~~-~~~LrI~~i~~~~~~~~~~ip-L~ 736 (1158)
T 3ei3_A 668 FACSDRPTVI-YSS-NHKLVFS-NVN------LKEVNYMCPLNSDGYPDSLALAN-NSTLTIGTIDEIQKLHIRTVP-LY 736 (1158)
T ss_dssp EEESSSCEEE-EES-SSSEEEE-EBS------SSCCCEEEEECCSSSTTEEEEEC-SSCEEEEEECCSSSEEEEEEE-CS
T ss_pred EEECCCCEEE-EEc-CCceEEe-ccC------hHHhceEeccCcccCCCcEEEEc-CCceEEEEecccCCeeEEEEe-CC
Confidence 444444 444 332 3443222 111 02222333454332 255444 4558888775432 234444 34
Q ss_pred cCeEEEEEeCCCCEEEEEecCCe-------------------------------------------------EEEEEccC
Q psy12614 245 KDILALTVSEDENYLYCAGVDPT-------------------------------------------------VVCFQRTR 275 (708)
Q Consensus 245 ~~i~~~~~s~~~~~l~~~~~dg~-------------------------------------------------i~iw~~~~ 275 (708)
..+..++++|+.+.++.+..+.. |++.|..+
T Consensus 737 ~Tprri~y~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~s~i~lidp~t 816 (1158)
T 3ei3_A 737 ESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHT 816 (1158)
T ss_dssp SEEEEEEEEGGGTEEEEEEEEEEEECSSSSEEESSCCHHHHCSEEEECCCCCC----------CCCEEEEEEEEEEETTT
T ss_pred CCceEEEEcCCCCEEEEEEEeccccccccccchhhhhhhhhhhhhcccccccccccccCchhhcCCceeeEEEEEEeCCC
Confidence 67788999998887766553321 11222111
Q ss_pred CcccccCCCCCCCCcceEEeEEEec-cccceEEEEEe------CCEEEEEc----------CCCeEEEEeCCCCceeecC
Q psy12614 276 KPQVCSTSGPEQGSSVWVRSVNRVI-HEGDVKSLALH------GNRLYSGG----------LDSYLSLSYYPPKTLVKYP 338 (708)
Q Consensus 276 ~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~v~~l~~~------~~~l~s~~----------~d~~i~iw~~~~~~~~~~~ 338 (708)
|.....+.. ....+.+++.. ..+++.|+ ..|.|.++++.+..+..+.
T Consensus 817 ----------------~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv~ 880 (1158)
T 3ei3_A 817 ----------------FEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVA 880 (1158)
T ss_dssp ----------------CCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETTEEEEEE
T ss_pred ----------------CeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECCEEEEEE
Confidence 111111111 11224444432 36788776 3578999998766554444
Q ss_pred ccCCCCceEEEEcCCcEEEEEcCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEE
Q psy12614 339 CTLAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYV 418 (708)
Q Consensus 339 ~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l 418 (708)
.........++.+=+.+++++-++.+++|++...+ .+. .....-..|..+.+...|.++
T Consensus 881 ~~~v~g~v~al~~~~g~Lla~ig~~l~vy~l~~~~--------------------~L~-~~~~~~~~i~~~~l~~~~~~I 939 (1158)
T 3ei3_A 881 EKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEK--------------------ELR-TECNHYNNIMALYLKTKGDFI 939 (1158)
T ss_dssp EEEESSCEEEEEEETTEEEEEETTEEEEEEECTTS--------------------CEE-EEEEECCCSCEEEEEEETTEE
T ss_pred EEEcCCcCEEEeeeCCEEEEEcCCEEEEEECCCCc--------------------eEE-EEeeccccEEEEEEeccCCEE
Confidence 22233445555554457777888999999998643 122 111111223333333357788
Q ss_pred EEEc-CCceEEEEEEecCCcceeEEeecCCcccccceeEEEEEecCCCeEEEEecCCcEEEe
Q psy12614 419 AYST-ESCVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVLISADSTLLLAVSLNGPLYII 479 (708)
Q Consensus 419 ~~~~-d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~~~~~dg~i~~~ 479 (708)
++|+ -..+.++....... .+.. +..+.....++++.|-.++ .++.+..+|.++-+
T Consensus 940 ~vgD~~~Sv~~~~y~~~~~--~L~~---~a~D~~~~~vta~~~ld~~-t~l~aD~~gNl~vl 995 (1158)
T 3ei3_A 940 LVGDLMRSVLLLAYKPMEG--NFEE---IARDFNPNWMSAVEILDDD-NFLGAENAFNLFVC 995 (1158)
T ss_dssp EEEESSBCEEEEEEETTTT--EEEE---EEECCSCBCEEEEEEEETT-EEEEEETTSEEEEE
T ss_pred EEEEhhheEEEEEEEcCCC--eEEE---EEeecccccEEEEEEEccC-cEEEEcCCCcEEEE
Confidence 8888 66788887775333 3333 2223335567778887665 55667888885544
|
| >4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A* | Back alignment and structure |
|---|
Probab=98.89 E-value=0.00016 Score=76.65 Aligned_cols=483 Identities=8% Similarity=-0.000 Sum_probs=261.8
Q ss_pred CcEEEEEEcCCCCEEEEE-eCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEE-EEEcCCCcEEEEECCCCe
Q psy12614 27 KVINCIACEPKSSRLAVS-RADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRL-FSGGLQGFVNEYDMRRLN 102 (708)
Q Consensus 27 ~~v~~~~~s~~~~~la~~-~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l-~s~~~d~~i~vwd~~~~~ 102 (708)
..+..++|++.+..|..+ ..++.|..+++....... .+.... .....|++. ++.| ++-...+.|.+.++....
T Consensus 37 ~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~-v~~~g~--~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~ 113 (628)
T 4a0p_A 37 KEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEH-VVEFGL--DYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQH 113 (628)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE-EECSSC--SCCCEEEEETTTTEEEEEETTTTEEEEEETTSTT
T ss_pred CceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEE-EEeCCC--CCcceEEEEeCCCEEEEEECCCCEEEEEecCCCc
Confidence 467899999977776655 457889999987654332 444332 456778887 5555 555567889999987654
Q ss_pred EeEEEeecCCceEEEEEecCCCEEEEEeC--CCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC--eE
Q psy12614 103 IKSSTAVTSGTCWCLSVHKKKRLLAAGTE--QGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA--AV 178 (708)
Q Consensus 103 ~~~~~~~~~~~v~~~~~s~~~~~la~~~~--d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d--~i 178 (708)
....+...-.....|++.|....|..... .+.|...++...... ... ..-.....+++++++..|+.+... .|
T Consensus 114 ~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~--~l~-~~~~~P~GlalD~~~~~LY~aD~~~~~I 190 (628)
T 4a0p_A 114 RQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERT--TLV-PNVGRANGLTIDYAKRRLYWTDLDTNLI 190 (628)
T ss_dssp CEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCE--EEE-CSCSSEEEEEEETTTTEEEEEETTTTEE
T ss_pred EEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceE--EEE-CCCCCcceEEEccccCEEEEEECCCCEE
Confidence 33333344456789999997666666542 567888888766553 222 234567899999988888777655 89
Q ss_pred EEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCE
Q psy12614 179 RVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENY 258 (708)
Q Consensus 179 ~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~ 258 (708)
...|+..... ..+... ......+++..+.-+++-...+.|...|..+|+....+.........+......+.
T Consensus 191 ~~~d~dG~~~-~v~~~~-------l~~P~glav~~~~ly~tD~~~~~I~~~dk~tg~~~~~l~~~~~~p~~i~v~~~~~q 262 (628)
T 4a0p_A 191 ESSNMLGLNR-EVIADD-------LPHPFGLTQYQDYIYWTDWSRRSIERANKTSGQNRTIIQGHLDYVMDILVFHSSRQ 262 (628)
T ss_dssp EEEETTSCSC-EEEEEC-------CSCEEEEEEETTEEEEEETTTTEEEEEETTTCCSCEEEECSCCSCCEEEEECGGGS
T ss_pred EEEcCCCCce-EEeecc-------CCCceEEEEECCEEEEecCCCCEEEEEECCCCCceEEEecCCCCcceeeeeeeccc
Confidence 9999865443 333221 23355777765333455556788999998777665555433333334432221100
Q ss_pred EEEEecC--------CeEEEEEc-cCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEeCCEEEEEcCCCeEEEEeC
Q psy12614 259 LYCAGVD--------PTVVCFQR-TRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALHGNRLYSGGLDSYLSLSYY 329 (708)
Q Consensus 259 l~~~~~d--------g~i~iw~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~s~~~d~~i~iw~~ 329 (708)
- +... ..+.+-.. ..-.+.|.. | +.......+|.. ...+|+.+. ...|+-..+
T Consensus 263 ~--~~n~C~~~ng~C~~~C~~~~~~~~~C~C~~-g-------------~~l~~d~~~C~~-~~~~Ll~s~-~~~i~~i~l 324 (628)
T 4a0p_A 263 S--GWNECASSNGHCSHLCLAVPVGGFVCGCPA-H-------------YSLNADNRTCSA-PTTFLLFSQ-KSAINRMVI 324 (628)
T ss_dssp C--CCCTTTTTGGGCSSEEEEETTTEEEEECST-T-------------CEECTTSSCEEC-CSSEEEEEE-TTEEEEECC
T ss_pred c--cceEeccCCCCcchhhhcCCCCCeeEEcCC-C-------------cEecccCCcCcc-ccceeeeec-cceEEEEec
Confidence 0 0000 00111000 000000000 0 000011111111 123343333 345655555
Q ss_pred CCCce--eecC-ccCCCCceEEEEcCCcEEEEE--cCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEE-Ee--c
Q psy12614 330 PPKTL--VKYP-CTLAQSTPVSLAKDIQHVLLQ--YTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKM-SA--V 401 (708)
Q Consensus 330 ~~~~~--~~~~-~~~~~~~~~~~s~~~~~l~~~--~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~ 401 (708)
..... ..++ ........+++.+....|... ..+.|..++..... ...+... .. .
T Consensus 325 ~~~~~~~~~l~~~~~~~~~~ld~d~~~~~iy~sD~~~~~I~r~~~~g~~------------------~~~v~~~~~~~~~ 386 (628)
T 4a0p_A 325 DEQQSPDIILPIHSLRNVRAIDYDPLDKQLYWIDSRQNMIRKAQEDGSQ------------------GFTVVVSSVPSQN 386 (628)
T ss_dssp CTTCCCCEECCCTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS------------------CEEEEC-------
T ss_pred ccccCceEEEEehhcCCceEEEEecCCCeEEEEecCcceEEEEEcCCCC------------------ceEEEEccccccc
Confidence 43321 1111 123345568888876666654 45677777665422 0111111 00 1
Q ss_pred CCCceEEEEeCCCCcEEEEEc--CCceEEEEEEecCCcceeEEeecCCcccccceeEEEEEecCCCeEEEEec-CC--cE
Q psy12614 402 NNATIRCSVVSNDGKYVAYST--ESCVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVLISADSTLLLAVSL-NG--PL 476 (708)
Q Consensus 402 ~~~~i~~~~~s~~g~~l~~~~--d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~~~~~-dg--~i 476 (708)
....+..+|+...++.|..++ .+.|.+.+++ +.. ...+ +.... .....+++.|...+|+.... .. .|
T Consensus 387 ~~~~p~glAvD~~~~nLY~td~~~~~I~v~~~~---G~~-~~~l--~~~~l--~~Pr~iavdp~~g~ly~tD~g~~~~~I 458 (628)
T 4a0p_A 387 LEIQPYDLSIDIYSRYIYWTCEATNVINVTRLD---GRS-VGVV--LKGEQ--DRPRAVVVNPEKGYMYFTNLQERSPKI 458 (628)
T ss_dssp -CCCEEEEEEETTTTEEEEEETTTTEEEEEETT---SCE-EEEE--EECTT--CCEEEEEEETTTTEEEEEEEETTEEEE
T ss_pred ccCCcceEEeeccCCeEEEEcCCCCEEEEEECC---CCe-EEEE--EeCCC--CceeeEEEecCCCeEEEeecCCCCCeE
Confidence 234678999998877776543 6677777664 221 1111 11112 23455999995444444433 22 36
Q ss_pred EEecCCCeEEEEEecCCCCCccCcceEEEEECCCCcEEEEEec-CCeEEEEECC-ceeeecC-CCCCCceEEEEcCCCCE
Q psy12614 477 YIIDLSSLEIKYCVDPYKSNLMSDVISLVQMSECKQYIVCADR-KSHVVIWKNG-QHHASLP-RYRKPSTAMAIHPTLST 553 (708)
Q Consensus 477 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~-d~~i~iw~~~-~~~~~~~-~~~~~v~~l~~s~d~~~ 553 (708)
+...... .....+.... -...+.++++++++.|+.++. .+.|...+++ +....+. .....+.+|+... ..
T Consensus 459 ~r~~~dG-~~~~~l~~~~----l~~P~gla~D~~~~~LYw~D~~~~~I~~~~~dG~~r~~~~~~~~~~P~glav~~--~~ 531 (628)
T 4a0p_A 459 ERAALDG-TEREVLFFSG----LSKPIALALDSRLGKLFWADSDLRRIESSDLSGANRIVLEDSNILQPVGLTVFE--NW 531 (628)
T ss_dssp EEEETTS-CSCEEEECSS----CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCEEEEEEET--TE
T ss_pred EEEeCCC-CCcEEEEecc----CCCccEEEEeCCCCEEEEEeCCCCEEEEEeCCCCceEEEEcCCCCCcEEEEEEC--CE
Confidence 6654321 1122222111 335689999998888887764 5789999998 3223322 3344567777753 44
Q ss_pred EEEEe-cCCcEEEEEcCCCCCC
Q psy12614 554 LVTVY-SDHRIVEFDLNRKAFT 574 (708)
Q Consensus 554 l~~~~-~dg~i~vwd~~~~~~~ 574 (708)
|..+. ..+.|...|..+++..
T Consensus 532 ly~tD~~~~~i~~~~k~~G~~~ 553 (628)
T 4a0p_A 532 LYWIDKQQQMIEKIDMTGREGR 553 (628)
T ss_dssp EEEEETTTTEEEEEETTSSSCC
T ss_pred EEEEECCCCeEEEEECcCCCCc
Confidence 55444 4567888887766543
|
| >1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A* | Back alignment and structure |
|---|
Probab=98.87 E-value=4.2e-06 Score=87.93 Aligned_cols=299 Identities=12% Similarity=0.115 Sum_probs=182.4
Q ss_pred CCEEEEEeC-CCcEEEEeC-CCCCeEEEEEecCCCCC----------cEEEEEE--eCCE----EEEEcCCCcEEEEECC
Q psy12614 38 SSRLAVSRA-DQSIEIWDI-SETPHVDRVFIGDPLSN----------SIECLTW--FNDR----LFSGGLQGFVNEYDMR 99 (708)
Q Consensus 38 ~~~la~~~~-dg~v~iwd~-~~~~~~~~~~~~h~~~~----------~v~~l~~--~~~~----l~s~~~d~~i~vwd~~ 99 (708)
+..|.+++. ++.|.-+|. .+|+.+= .+.... .. ....+++ .+.. |+.++.|+.|..+|..
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~lW-~~~~~~-~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~ 139 (599)
T 1w6s_A 62 DGKMYIHTSFPNNTFALGLDDPGTILW-QDKPKQ-NPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAE 139 (599)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEE-EECCCC-CGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETT
T ss_pred CCEEEEEeCCCCEEEEEeCCCCCcEEE-EECCCC-CccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECC
Confidence 556777777 889999999 8998764 222111 00 0123556 4444 8889999999999999
Q ss_pred CCeEeEEEeecC----CceEE-EEEecCCCEEEEEe------CCCcEEEEEccCCcEEEEEecccccc------------
Q psy12614 100 RLNIKSSTAVTS----GTCWC-LSVHKKKRLLAAGT------EQGHINLFQISDEGLLYEKLLDRQQG------------ 156 (708)
Q Consensus 100 ~~~~~~~~~~~~----~~v~~-~~~s~~~~~la~~~------~d~~i~iwd~~~~~~~~~~~~~~~~~------------ 156 (708)
+|+.+....... ..+.+ ..+. ++ .+++++ .++.|+.+|.++|+.+..........
T Consensus 140 TG~~~W~~~~~~~~~~~~~~ssP~v~-~g-~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~ 217 (599)
T 1w6s_A 140 TGETVWKVENSDIKVGSTLTIAPYVV-KD-KVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKN 217 (599)
T ss_dssp TCCEEEEEECCCGGGTCBCCSCCEEE-TT-EEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTC
T ss_pred CCCEEEeecCCCCCccceeecCCEEE-CC-EEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCcccccccccccccc
Confidence 999987765322 01221 1121 34 455554 37999999999999886544332110
Q ss_pred -----------------------cE-EEEEECCCCCEEEEecCC-----------------eEEEEEcCCCceEEEEEec
Q psy12614 157 -----------------------RI-LCTAWHSSGDYLVTGCAA-----------------AVRVWDIHKGHAIHKMSLD 195 (708)
Q Consensus 157 -----------------------~v-~~~~~s~d~~~l~~~~~d-----------------~i~iwd~~~~~~~~~~~~~ 195 (708)
.+ ..+++.++...++.+..+ .|..+|..+|+.+..+...
T Consensus 218 ~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~ 297 (599)
T 1w6s_A 218 PHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKT 297 (599)
T ss_dssp GGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESS
T ss_pred ccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecC
Confidence 00 134556677777766542 7999999999999888765
Q ss_pred ccCC--C-CCceeEEEEEEc-cCC---E-EEEEcCCCcEEEEeCCCCeeEEEeeccc-------------cCe-------
Q psy12614 196 KSSK--F-SKNTAVWCVAFC-ADF---T-IITGDSGGFVRFWDGKTGVQWSDVKTHK-------------KDI------- 247 (708)
Q Consensus 196 ~~~~--~-~~~~~v~~~~~~-~~~---~-l~~~~~dg~i~~wd~~~~~~~~~~~~~~-------------~~i------- 247 (708)
.... + ....++. +... .+| . ++.++.+|.++++|.++|+.+....... .++
T Consensus 298 ~~d~wd~d~~~~p~l-~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~ 376 (599)
T 1w6s_A 298 PHDEWDYAGVNVMML-SEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFKSVDLKTGQPVRDPEYGT 376 (599)
T ss_dssp TTCSSCCCCCCCCEE-EEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCCEEECGGGCC
T ss_pred CCccccccCCCccEE-EeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecccccCCcccccccccCCCceeeccccCC
Confidence 2100 0 0011121 2222 466 3 6678899999999999999876654211 011
Q ss_pred -------------------EEEEEeCCCCEEEEEe---------------------------------------cCCeEE
Q psy12614 248 -------------------LALTVSEDENYLYCAG---------------------------------------VDPTVV 269 (708)
Q Consensus 248 -------------------~~~~~s~~~~~l~~~~---------------------------------------~dg~i~ 269 (708)
..++++|+..++++.. .+|.|.
T Consensus 377 ~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~p~~~~~~~~~~G~l~ 456 (599)
T 1w6s_A 377 RMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYPGPKGDRQNYEGLGQIK 456 (599)
T ss_dssp CTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSBTTTTBCCEEEE
T ss_pred CCCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeecccccccCCcceecccceeccCCcCCcccCCCcCeEE
Confidence 2467888877776542 235677
Q ss_pred EEEccCCcccccCCCCCCCCcceEEeEEEeccccceE-E-EEEeCCEEEEEcCCCeEEEEeCCCCce-eecCc-cCCCCc
Q psy12614 270 CFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVK-S-LALHGNRLYSGGLDSYLSLSYYPPKTL-VKYPC-TLAQST 345 (708)
Q Consensus 270 iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~-~-l~~~~~~l~s~~~d~~i~iw~~~~~~~-~~~~~-~~~~~~ 345 (708)
-||+.+ |+ ..|.... ..+.. . +...+.+++.++.|+.++.+|.++++. .++.. ......
T Consensus 457 A~D~~t--------G~----~~W~~~~-----~~~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~lW~~~l~~g~~~~ 519 (599)
T 1w6s_A 457 AYNAIT--------GD----YKWEKME-----RFAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWKFKIPSGAIGY 519 (599)
T ss_dssp EECTTT--------CC----EEEEEEE-----SSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSC
T ss_pred EEECCC--------CC----EEeEecC-----CCCccCcceEecCCEEEEECCCCeEEEEECCCCCEEEEeeCCCCcEec
Confidence 777777 54 3343211 11111 1 333488888999999999999998873 33321 122335
Q ss_pred eEEEEcCCcEEEE
Q psy12614 346 PVSLAKDIQHVLL 358 (708)
Q Consensus 346 ~~~~s~~~~~l~~ 358 (708)
.+.+..+|+..++
T Consensus 520 P~~y~~~G~qyv~ 532 (599)
T 1w6s_A 520 PMTYTHKGTQYVA 532 (599)
T ss_dssp CEEEEETTEEEEE
T ss_pred cEEEEeCCEEEEE
Confidence 5667777775443
|
| >1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1 | Back alignment and structure |
|---|
Probab=98.87 E-value=1.2e-06 Score=94.50 Aligned_cols=237 Identities=16% Similarity=0.146 Sum_probs=155.3
Q ss_pred CCEEEEEeCCCcEEEEeCCCCCeEEEEEecCC-CCCcEEE-EEEeCCEEEEEcC------CCcEEEEECCCCeEeEEEee
Q psy12614 38 SSRLAVSRADQSIEIWDISETPHVDRVFIGDP-LSNSIEC-LTWFNDRLFSGGL------QGFVNEYDMRRLNIKSSTAV 109 (708)
Q Consensus 38 ~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~-~~~~v~~-l~~~~~~l~s~~~------d~~i~vwd~~~~~~~~~~~~ 109 (708)
+..|++++.|+.|..+|..+|+.+-..-.... ....+.+ ....++.++++.. +|.|..+|..+|+.+..+..
T Consensus 117 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~ 196 (668)
T 1kv9_A 117 GDKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYT 196 (668)
T ss_dssp BTEEEEECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEES
T ss_pred CCEEEEEcCCCEEEEEECCCCCEeeeeccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecc
Confidence 55788888899999999999998753322211 0011111 1223666666643 58999999999999887753
Q ss_pred cC-------------------------------CceEEEEEecCCCEEEEEeCCC-------------------cEEEEE
Q psy12614 110 TS-------------------------------GTCWCLSVHKKKRLLAAGTEQG-------------------HINLFQ 139 (708)
Q Consensus 110 ~~-------------------------------~~v~~~~~s~~~~~la~~~~d~-------------------~i~iwd 139 (708)
.. .....+++.|++.++++++.++ .|..+|
T Consensus 197 ~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD 276 (668)
T 1kv9_A 197 VPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIR 276 (668)
T ss_dssp SCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEEC
T ss_pred cCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEc
Confidence 11 1112478999888888887765 399999
Q ss_pred ccCCcEEEEEeccccc-------ccEEEEEECCCCC---EEEEecCC-eEEEEEcCCCceEEEEEecccCC---C--CCc
Q psy12614 140 ISDEGLLYEKLLDRQQ-------GRILCTAWHSSGD---YLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSK---F--SKN 203 (708)
Q Consensus 140 ~~~~~~~~~~~~~~~~-------~~v~~~~~s~d~~---~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~---~--~~~ 203 (708)
..+|+.........|. .+.....+..+|+ .++.++.+ .+.++|..+|+.+.........- + ...
T Consensus 277 ~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g 356 (668)
T 1kv9_A 277 PDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATG 356 (668)
T ss_dssp TTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTC
T ss_pred CCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccccccccC
Confidence 9999998766554443 2233233334665 68888888 99999999999986654321000 0 000
Q ss_pred eeE------------------------EEEEEccCCE-EEEE------------------------------------cC
Q psy12614 204 TAV------------------------WCVAFCADFT-IITG------------------------------------DS 222 (708)
Q Consensus 204 ~~v------------------------~~~~~~~~~~-l~~~------------------------------------~~ 222 (708)
.++ ..++++|+.. +++. ..
T Consensus 357 ~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~ 436 (668)
T 1kv9_A 357 RPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVV 436 (668)
T ss_dssp CEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGC
T ss_pred CccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCc
Confidence 000 1256777653 2221 12
Q ss_pred CCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccC
Q psy12614 223 GGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTR 275 (708)
Q Consensus 223 dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~ 275 (708)
+|.|..||+.+|+.+.....+ .......+...+.++++++.|+.++.||..+
T Consensus 437 ~g~l~A~D~~tG~~~W~~~~~-~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~t 488 (668)
T 1kv9_A 437 SGALLAWDPVKQKAAWKVPYP-THWNGGTLSTAGNLVFQGTAAGQMHAYSADK 488 (668)
T ss_dssp EEEEEEEETTTTEEEEEEEES-SSCCCCEEEETTTEEEEECTTSEEEEEETTT
T ss_pred cceEEEEeCCCCcEEEEccCC-CCCcCceeEeCCCEEEEECCcccchhhhhhc
Confidence 378999999999988777643 3333344555677999999999999999999
|
| >3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris} | Back alignment and structure |
|---|
Probab=98.82 E-value=7.9e-06 Score=73.61 Aligned_cols=191 Identities=9% Similarity=0.052 Sum_probs=129.8
Q ss_pred EEecCCCCCcEEEEEEe-CCEEEEEcCC--CcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEE-EeCCCcEEEEE
Q psy12614 64 VFIGDPLSNSIECLTWF-NDRLFSGGLQ--GFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAA-GTEQGHINLFQ 139 (708)
Q Consensus 64 ~~~~h~~~~~v~~l~~~-~~~l~s~~~d--~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~-~~~d~~i~iwd 139 (708)
.+ .|.-..-...+.|+ +..+.+.+.. +.|+.+|+++++.+..+.... .........+++.|.. .-.++.+.+||
T Consensus 14 ~~-phd~~~ftqGL~~~~~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~-~~fgeGi~~~~~~ly~ltw~~~~v~v~D 91 (243)
T 3mbr_X 14 RY-PHDTTAFTEGLFYLRGHLYESTGETGRSSVRKVDLETGRILQRAEVPP-PYFGAGIVAWRDRLIQLTWRNHEGFVYD 91 (243)
T ss_dssp EE-ECCTTCCEEEEEEETTEEEEEECCTTSCEEEEEETTTCCEEEEEECCT-TCCEEEEEEETTEEEEEESSSSEEEEEE
T ss_pred Ec-CCCCccccccEEEECCEEEEECCCCCCceEEEEECCCCCEEEEEeCCC-CcceeEEEEeCCEEEEEEeeCCEEEEEE
Confidence 44 45534668899999 4444555654 489999999999988876433 2333333334555544 44689999999
Q ss_pred ccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEE-
Q psy12614 140 ISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTI- 217 (708)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l- 217 (708)
..+.+.+......+ .+ ..++ +|++.|+.+..+ .|.++|..+.+.+.++.....+. .-..++.+.+. +|++
T Consensus 92 ~~tl~~~~ti~~~~-~G--wglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~--~~~~lNeLe~~-~G~ly 163 (243)
T 3mbr_X 92 LATLTPRARFRYPG-EG--WALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGR--PLDNLNELEWV-NGELL 163 (243)
T ss_dssp TTTTEEEEEEECSS-CC--CEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTE--ECCCEEEEEEE-TTEEE
T ss_pred CCcCcEEEEEeCCC-Cc--eEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCc--ccccceeeEEe-CCEEE
Confidence 99999874333332 22 3444 566666666556 99999999999999988753111 01344566665 7774
Q ss_pred EEEcCCCcEEEEeCCCCeeEEEeecc-------------ccCeEEEEEeCCCCEEEEEec
Q psy12614 218 ITGDSGGFVRFWDGKTGVQWSDVKTH-------------KKDILALTVSEDENYLYCAGV 264 (708)
Q Consensus 218 ~~~~~dg~i~~wd~~~~~~~~~~~~~-------------~~~i~~~~~s~~~~~l~~~~~ 264 (708)
+....+..|.+.|.++|+.+..+... ..-.+.++++|+++.|++.+.
T Consensus 164 anvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 164 ANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp EEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred EEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECC
Confidence 44446789999999999998887522 124578999999888877764
|
| >2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A* | Back alignment and structure |
|---|
Probab=98.82 E-value=5e-06 Score=87.55 Aligned_cols=192 Identities=10% Similarity=0.081 Sum_probs=120.8
Q ss_pred eCCEEEEEcC-CCcEEEEEC-CCCeEeEEEeecCCc-----------eEEEEEecCCCEEEEEeCCCcEEEEEccCCcEE
Q psy12614 80 FNDRLFSGGL-QGFVNEYDM-RRLNIKSSTAVTSGT-----------CWCLSVHKKKRLLAAGTEQGHINLFQISDEGLL 146 (708)
Q Consensus 80 ~~~~l~s~~~-d~~i~vwd~-~~~~~~~~~~~~~~~-----------v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~ 146 (708)
.++.++.++. ++.|.-+|. .+|+.+..+...... -..+++ ++..+++++.|+.|..+|..+|+.+
T Consensus 61 ~~g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG~~~ 138 (571)
T 2ad6_A 61 IGDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAY--GAGQIVKKQANGHLLALDAKTGKIN 138 (571)
T ss_dssp ETTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEE
T ss_pred ECCEEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEE--ECCEEEEEeCCCEEEEEECCCCCEE
Confidence 3778888888 899999999 999998877633210 011233 3567888888999999999999998
Q ss_pred EEEecccccc--cEE-EEEECCCCCEEEEecC------C-eEEEEEcCCCceEEEEEecccCC-------------C---
Q psy12614 147 YEKLLDRQQG--RIL-CTAWHSSGDYLVTGCA------A-AVRVWDIHKGHAIHKMSLDKSSK-------------F--- 200 (708)
Q Consensus 147 ~~~~~~~~~~--~v~-~~~~s~d~~~l~~~~~------d-~i~iwd~~~~~~~~~~~~~~~~~-------------~--- 200 (708)
....+..+.. .+. +.... ++ .++.++. + .|..+|..+|+.+.++....... +
T Consensus 139 W~~~~~~~~~~~~~~~~P~v~-~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~ 216 (571)
T 2ad6_A 139 WEVEVCDPKVGSTLTQAPFVA-KD-TVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQ 216 (571)
T ss_dssp EEEECCCGGGTCBCCSCCEEE-TT-EEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCC
T ss_pred EEecCCCCCccceeccCCEEE-CC-EEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCccccccCcccccccccccc
Confidence 6655543211 111 11111 44 4555543 6 99999999999998887542100 0
Q ss_pred -------------C-CceeE-EEEEEccC-CEEEEEcCC----------------CcEEEEeCCCCeeEEEeeccc----
Q psy12614 201 -------------S-KNTAV-WCVAFCAD-FTIITGDSG----------------GFVRFWDGKTGVQWSDVKTHK---- 244 (708)
Q Consensus 201 -------------~-~~~~v-~~~~~~~~-~~l~~~~~d----------------g~i~~wd~~~~~~~~~~~~~~---- 244 (708)
. ....+ ..+++.++ +.++.+..+ +.|..+|.++|+.+-.++...
T Consensus 217 ~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~ 296 (571)
T 2ad6_A 217 FGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEW 296 (571)
T ss_dssp SSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSS
T ss_pred cccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCccc
Confidence 0 00000 12455554 455555532 359999999999887765321
Q ss_pred -----cCeEEEEEeCCCC---EEEEEecCCeEEEEEccC
Q psy12614 245 -----KDILALTVSEDEN---YLYCAGVDPTVVCFQRTR 275 (708)
Q Consensus 245 -----~~i~~~~~s~~~~---~l~~~~~dg~i~iw~~~~ 275 (708)
....-+....+|+ .++.++.+|.++++|..+
T Consensus 297 d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l~~lD~~t 335 (571)
T 2ad6_A 297 DFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNREN 335 (571)
T ss_dssp CCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTT
T ss_pred ccccCCCCEEEecccCCcEEEEEEEeCCCcEEEEEECCC
Confidence 1111122234674 577888899999999988
|
| >3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris} | Back alignment and structure |
|---|
Probab=98.80 E-value=3.9e-06 Score=75.57 Aligned_cols=188 Identities=12% Similarity=0.083 Sum_probs=127.7
Q ss_pred CcEEEEEEcCCCCEEEEEeCC--CcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEeCCEEEE-EcCCCcEEEEECCCCeE
Q psy12614 27 KVINCIACEPKSSRLAVSRAD--QSIEIWDISETPHVDRVFIGDPLSNSIECLTWFNDRLFS-GGLQGFVNEYDMRRLNI 103 (708)
Q Consensus 27 ~~v~~~~~s~~~~~la~~~~d--g~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~~~~l~s-~~~d~~i~vwd~~~~~~ 103 (708)
.-...+.|++ +.+..+.+.+ +.|+.+|+.+++.+. .+.-.. .---..++..++.|+. .-.++.+.++|.++.+.
T Consensus 21 ~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~-~~~l~~-~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~tl~~ 97 (243)
T 3mbr_X 21 AFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQ-RAEVPP-PYFGAGIVAWRDRLIQLTWRNHEGFVYDLATLTP 97 (243)
T ss_dssp CCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEE-EEECCT-TCCEEEEEEETTEEEEEESSSSEEEEEETTTTEE
T ss_pred cccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEE-EEeCCC-CcceeEEEEeCCEEEEEEeeCCEEEEEECCcCcE
Confidence 4577999987 4455555554 489999999999887 333222 0233556777555554 45789999999999999
Q ss_pred eEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEeccccc---ccEEEEEECCCCCEEEEecCC-eEE
Q psy12614 104 KSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQ---GRILCTAWHSSGDYLVTGCAA-AVR 179 (708)
Q Consensus 104 ~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~---~~v~~~~~s~d~~~l~~~~~d-~i~ 179 (708)
+.++...... + .+.+|+..|+++..++.|.++|.++.+.+.......+. ..++.+.|. +|+..+..-.+ .|.
T Consensus 98 ~~ti~~~~~G-w--glt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw~s~~I~ 173 (243)
T 3mbr_X 98 RARFRYPGEG-W--ALTSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELLANVWLTSRIA 173 (243)
T ss_dssp EEEEECSSCC-C--EEEECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTTTEEE
T ss_pred EEEEeCCCCc-e--EEeeCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEEEEECCCCeEE
Confidence 9998854322 3 34467787877777899999999998877433333222 245566765 66655544445 999
Q ss_pred EEEcCCCceEEEEEecccCC------CCCceeEEEEEEccCC-EEEEEc
Q psy12614 180 VWDIHKGHAIHKMSLDKSSK------FSKNTAVWCVAFCADF-TIITGD 221 (708)
Q Consensus 180 iwd~~~~~~~~~~~~~~~~~------~~~~~~v~~~~~~~~~-~l~~~~ 221 (708)
+.|..+|+.+..+....-.. .......+.+|+.|++ +|++.+
T Consensus 174 vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTG 222 (243)
T 3mbr_X 174 RIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTG 222 (243)
T ss_dssp EECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEE
T ss_pred EEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEEC
Confidence 99999999999998653110 0123567899999977 544443
|
| >1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A* | Back alignment and structure |
|---|
Probab=98.79 E-value=7.3e-06 Score=86.15 Aligned_cols=193 Identities=10% Similarity=0.093 Sum_probs=124.4
Q ss_pred CCEEEEEcC-CCcEEEEEC-CCCeEeEEEeecCCc-----------eEEEEEecCCCE----EEEEeCCCcEEEEEccCC
Q psy12614 81 NDRLFSGGL-QGFVNEYDM-RRLNIKSSTAVTSGT-----------CWCLSVHKKKRL----LAAGTEQGHINLFQISDE 143 (708)
Q Consensus 81 ~~~l~s~~~-d~~i~vwd~-~~~~~~~~~~~~~~~-----------v~~~~~s~~~~~----la~~~~d~~i~iwd~~~~ 143 (708)
++.+++++. ++.|.-+|. .+|+.+.++...... ...++++|.+.. |++++.|+.|..+|..+|
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG 141 (599)
T 1w6s_A 62 DGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAETG 141 (599)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTTC
T ss_pred CCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECCCC
Confidence 778888888 899999999 999998887643221 133566554445 888889999999999999
Q ss_pred cEEEEEecccccc--cEE-EEEECCCCCEEEEec------CC-eEEEEEcCCCceEEEEEecccCC-------CC-----
Q psy12614 144 GLLYEKLLDRQQG--RIL-CTAWHSSGDYLVTGC------AA-AVRVWDIHKGHAIHKMSLDKSSK-------FS----- 201 (708)
Q Consensus 144 ~~~~~~~~~~~~~--~v~-~~~~s~d~~~l~~~~------~d-~i~iwd~~~~~~~~~~~~~~~~~-------~~----- 201 (708)
+.+....+..+.. .+. ..... ++ .+++++ .+ .|+.+|.++|+.+.++....... +.
T Consensus 142 ~~~W~~~~~~~~~~~~~~ssP~v~-~g-~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~ 219 (599)
T 1w6s_A 142 ETVWKVENSDIKVGSTLTIAPYVV-KD-KVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPH 219 (599)
T ss_dssp CEEEEEECCCGGGTCBCCSCCEEE-TT-EEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGG
T ss_pred CEEEeecCCCCCccceeecCCEEE-CC-EEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCcccccccccccccccc
Confidence 9987655543211 111 11111 34 455554 36 99999999999998887542100 00
Q ss_pred ------------------CceeEE-EEEEccC-CEEEEEcCC----------------CcEEEEeCCCCeeEEEeecccc
Q psy12614 202 ------------------KNTAVW-CVAFCAD-FTIITGDSG----------------GFVRFWDGKTGVQWSDVKTHKK 245 (708)
Q Consensus 202 ------------------~~~~v~-~~~~~~~-~~l~~~~~d----------------g~i~~wd~~~~~~~~~~~~~~~ 245 (708)
....++ .+++.++ +.++.+..+ +.|..+|.++|+.+-.++....
T Consensus 220 ~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~ 299 (599)
T 1w6s_A 220 YGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPH 299 (599)
T ss_dssp GCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTT
T ss_pred ccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCC
Confidence 000011 2445554 356666654 3799999999998877654221
Q ss_pred ---------CeEEEEEe-CCC---CEEEEEecCCeEEEEEccC
Q psy12614 246 ---------DILALTVS-EDE---NYLYCAGVDPTVVCFQRTR 275 (708)
Q Consensus 246 ---------~i~~~~~s-~~~---~~l~~~~~dg~i~iw~~~~ 275 (708)
...-+... .+| ..++.++.+|.++++|..+
T Consensus 300 d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~t 342 (599)
T 1w6s_A 300 DEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTD 342 (599)
T ss_dssp CSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTT
T ss_pred ccccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEEECCC
Confidence 11112222 567 4677788999999999988
|
| >2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus} | Back alignment and structure |
|---|
Probab=98.76 E-value=3.7e-05 Score=74.89 Aligned_cols=275 Identities=10% Similarity=0.109 Sum_probs=161.5
Q ss_pred CCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEE-Ee--cCCCCCcEEEEEEeCCEEEEEcCCCcEEEEECCCC
Q psy12614 25 EPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRV-FI--GDPLSNSIECLTWFNDRLFSGGLQGFVNEYDMRRL 101 (708)
Q Consensus 25 h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~-~~--~h~~~~~v~~l~~~~~~l~s~~~d~~i~vwd~~~~ 101 (708)
....+.+++|.+++..+|+| ..|.| +...+.++.=... +. ... ..+.+|.|..+.++.++..+.|.. ..+.|
T Consensus 34 ~~~~~~~v~~~~~~~~~~~G-~~g~i-~~s~DgG~tW~~~~~~~~~~~--~~~~~i~~~~~~~~~~g~~g~i~~-S~DgG 108 (327)
T 2xbg_A 34 TTATILDMSFIDRHHGWLVG-VNATL-METRDGGQTWEPRTLVLDHSD--YRFNSVSFQGNEGWIVGEPPIMLH-TTDGG 108 (327)
T ss_dssp CSSCEEEEEESSSSCEEEEE-TTTEE-EEESSTTSSCEECCCCCSCCC--CEEEEEEEETTEEEEEEETTEEEE-ESSTT
T ss_pred CCCcEEEEEECCCCcEEEEc-CCCeE-EEeCCCCCCCeECCCCCCCCC--ccEEEEEecCCeEEEEECCCeEEE-ECCCC
Confidence 35679999999888888855 56655 3344434321111 11 123 578999998545555666675544 33334
Q ss_pred eEeEEEe---ecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-e
Q psy12614 102 NIKSSTA---VTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-A 177 (708)
Q Consensus 102 ~~~~~~~---~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~ 177 (708)
+.-..+. .+.+.+..+.+.+++..++++ .++.|.. ..+.++. ......+....+..+.+.|++.+++.+..+ .
T Consensus 109 ~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~g~v~~-S~DgG~t-W~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~~ 185 (327)
T 2xbg_A 109 QSWSQIPLDPKLPGSPRLIKALGNGSAEMIT-NVGAIYR-TKDSGKN-WQALVQEAIGVMRNLNRSPSGEYVAVSSRGSF 185 (327)
T ss_dssp SSCEECCCCTTCSSCEEEEEEEETTEEEEEE-TTCCEEE-ESSTTSS-EEEEECSCCCCEEEEEECTTSCEEEEETTSSE
T ss_pred CCceECccccCCCCCeEEEEEECCCCEEEEe-CCccEEE-EcCCCCC-CEEeecCCCcceEEEEEcCCCcEEEEECCCcE
Confidence 3322222 123457788888777766654 4564432 2222322 113334456678999999999988877666 4
Q ss_pred EEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEEEEcCCCcEEEEeCCCCeeEEEeec----cccCeEEEEEe
Q psy12614 178 VRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVKT----HKKDILALTVS 253 (708)
Q Consensus 178 i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~----~~~~i~~~~~s 253 (708)
.+-+|- .+.....+... ....+..+++.++++++.++.+|.+++.+...|+....+.. ....+..+++.
T Consensus 186 ~~S~d~-gG~tW~~~~~~------~~~~~~~~~~~~~g~~~~~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~ 258 (327)
T 2xbg_A 186 YSTWEP-GQTAWEPHNRT------TSRRLHNMGFTPDGRLWMIVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYR 258 (327)
T ss_dssp EEEECT-TCSSCEEEECC------SSSCEEEEEECTTSCEEEEETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEES
T ss_pred EEEeCC-CCCceeECCCC------CCCccceeEECCCCCEEEEeCCceEEEecCCCCCeeEeccCCcccCCcceEEEEec
Confidence 444442 13433333322 15668889999999877777788888775333444333321 22458889999
Q ss_pred CCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe-CCEEEEEcCCCeEEEEeC
Q psy12614 254 EDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH-GNRLYSGGLDSYLSLSYY 329 (708)
Q Consensus 254 ~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~-~~~l~s~~~d~~i~iw~~ 329 (708)
+++..++++ .++.+ .+..+. |+ .|............+.++.+. +..++.++.+|.|..++-
T Consensus 259 ~~~~~~~~g-~~g~i-~~S~Dg--------G~-----tW~~~~~~~~~~~~~~~v~~~~~~~~~~~G~~G~i~~~~~ 320 (327)
T 2xbg_A 259 TPNEVWLAG-GAGAL-LCSQDG--------GQ-----TWQQDVDVKKVPSNFYKILFFSPDQGFILGQKGILLRYVT 320 (327)
T ss_dssp SSSCEEEEE-STTCE-EEESST--------TS-----SCEECGGGTTSSSCCCEEEEEETTEEEEECSTTEEEEECC
T ss_pred CCCEEEEEe-CCCeE-EEeCCC--------Cc-----ccEEcCccCCCCCCeEEEEEECCCceEEEcCCceEEEEcC
Confidence 887766655 46766 344444 32 454322111233567788886 777888888998766543
|
| >2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A* | Back alignment and structure |
|---|
Probab=98.73 E-value=9.6e-06 Score=79.13 Aligned_cols=239 Identities=11% Similarity=0.019 Sum_probs=144.8
Q ss_pred CceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecc-----------------cccccEEEEEECC-CCCEEEEe
Q psy12614 112 GTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLD-----------------RQQGRILCTAWHS-SGDYLVTG 173 (708)
Q Consensus 112 ~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~-----------------~~~~~v~~~~~s~-d~~~l~~~ 173 (708)
....+++++++++++.++..++.|..|+..++......... .....+..+++.+ +++ |+.+
T Consensus 19 ~~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~-l~v~ 97 (322)
T 2fp8_A 19 YAPNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQ-LYIV 97 (322)
T ss_dssp SCCCCEECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTE-EEEE
T ss_pred CCceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCc-EEEE
Confidence 34567899999987888888999999998876654211100 0123578999998 554 5555
Q ss_pred cCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEcc-CCEEEEEcC------------------CCcEEEEeCCC
Q psy12614 174 CAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCA-DFTIITGDS------------------GGFVRFWDGKT 233 (708)
Q Consensus 174 ~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~l~~~~~------------------dg~i~~wd~~~ 233 (708)
... .|..+|..++.. ..+...... ........+++.+ +|++..+.. +|.|..||..+
T Consensus 98 d~~~~i~~~d~~~g~~-~~~~~~~~~--~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~ 174 (322)
T 2fp8_A 98 DCYYHLSVVGSEGGHA-TQLATSVDG--VPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPST 174 (322)
T ss_dssp ETTTEEEEECTTCEEC-EEEESEETT--EECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTT
T ss_pred ECCCCEEEEeCCCCEE-EEecccCCC--CcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCC
Confidence 445 788888765543 222211000 0023467899999 998655443 36799999877
Q ss_pred CeeEEEeeccccCeEEEEEeCCCCEEEEE-ecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe-
Q psy12614 234 GVQWSDVKTHKKDILALTVSEDENYLYCA-GVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH- 311 (708)
Q Consensus 234 ~~~~~~~~~~~~~i~~~~~s~~~~~l~~~-~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~- 311 (708)
++...... .......++++|+++.|+.+ ...+.|..|++.. ... ........ ..+ ...+++.
T Consensus 175 ~~~~~~~~-~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~--------~~~---~~~~~~~~---~~g-P~gi~~d~ 238 (322)
T 2fp8_A 175 KETTLLLK-ELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEG--------PKK---GTAEVLVK---IPN-PGNIKRNA 238 (322)
T ss_dssp TEEEEEEE-EESCCCEEEECTTSSEEEEEEGGGTEEEEEESSS--------TTT---TCEEEEEE---CSS-EEEEEECT
T ss_pred CEEEEecc-CCccCcceEECCCCCEEEEEeCCCCeEEEEECCC--------CcC---CccceEEe---CCC-CCCeEECC
Confidence 76433322 22345679999999877666 4568999999875 210 01111111 123 6778887
Q ss_pred -CCEEEEEcC----------CCeEEEEeCCCCceeecCcc----CCCCceEEEEcCCcEEEEE-cCCeEEEEEecC
Q psy12614 312 -GNRLYSGGL----------DSYLSLSYYPPKTLVKYPCT----LAQSTPVSLAKDIQHVLLQ-YTSHLELWSLGS 371 (708)
Q Consensus 312 -~~~l~s~~~----------d~~i~iw~~~~~~~~~~~~~----~~~~~~~~~s~~~~~l~~~-~~~~i~i~~~~~ 371 (708)
|++.++... .+.|..++.....+..+..+ ......+++ .++++.++. ..+.|..+++..
T Consensus 239 ~G~l~va~~~~~~~~~~~~~~~~v~~~d~~G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~~~~~~ 313 (322)
T 2fp8_A 239 DGHFWVSSSEELDGNMHGRVDPKGIKFDEFGNILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGSVGILVYDK 313 (322)
T ss_dssp TSCEEEEEEEETTSSTTSCEEEEEEEECTTSCEEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSEEEEEEC--
T ss_pred CCCEEEEecCcccccccCCCccEEEEECCCCCEEEEEECCCCCccccceEEEE-eCCEEEEeecCCCceEEEeccc
Confidence 665555443 46788888765555444422 223444544 466666654 677888888765
|
| >2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3 | Back alignment and structure |
|---|
Probab=98.71 E-value=9.9e-06 Score=78.30 Aligned_cols=224 Identities=9% Similarity=-0.035 Sum_probs=138.5
Q ss_pred CcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCC--CcEEEEECCCCe
Q psy12614 27 KVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQ--GFVNEYDMRRLN 102 (708)
Q Consensus 27 ~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d--~~i~vwd~~~~~ 102 (708)
.....++++|+|+++++-..++.|..||...+ ... .+. .. .....+++. ++.+++.... ..|..+|..+++
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~-~~~-~~~-~~--~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~ 106 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGN-QQI-HAT-VE--GKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGT 106 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTCC-EEE-EEE-CS--SEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSC
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCCc-eEE-EEe-CC--CCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCe
Confidence 56789999999997777667899999998764 322 332 23 678999998 5644444332 247777888877
Q ss_pred EeEEEee-cCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEe--------cccccccEEEEEECCCCCEEEEe
Q psy12614 103 IKSSTAV-TSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKL--------LDRQQGRILCTAWHSSGDYLVTG 173 (708)
Q Consensus 103 ~~~~~~~-~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~--------~~~~~~~v~~~~~s~d~~~l~~~ 173 (708)
....... .......++..+++..+++-..++.|+.+|..++....... ....-.....+ +||++.|+.+
T Consensus 107 ~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~ 184 (306)
T 2p4o_A 107 VETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVS 184 (306)
T ss_dssp EEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEE
T ss_pred EEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEE
Confidence 5433321 12234556666655545544458889999887653211000 00111234455 7888877666
Q ss_pred cC-C-eEEEEEcCC-Cce--EEEEEecccCCCCCceeEEEEEEccCCEEEEEc-CCCcEEEEeCCCCeeEE--Eeecccc
Q psy12614 174 CA-A-AVRVWDIHK-GHA--IHKMSLDKSSKFSKNTAVWCVAFCADFTIITGD-SGGFVRFWDGKTGVQWS--DVKTHKK 245 (708)
Q Consensus 174 ~~-d-~i~iwd~~~-~~~--~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~-~dg~i~~wd~~~~~~~~--~~~~~~~ 245 (708)
.. . .|..+++.. ++. ...+.. ......+++.++|++.++. ..+.|.++|.. ++... .+.....
T Consensus 185 d~~~~~I~~~~~~~~g~~~~~~~~~~--------~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~~~~~~~~~~~ 255 (306)
T 2p4o_A 185 NTEKMLLLRIPVDSTDKPGEPEIFVE--------QTNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTIIAQAEQGVI 255 (306)
T ss_dssp ETTTTEEEEEEBCTTSCBCCCEEEEE--------SCCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEEEECGGGTCT
T ss_pred eCCCCEEEEEEeCCCCCCCccEEEec--------cCCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCEEEEeecccccC
Confidence 54 4 899999874 332 111111 1234568889999855554 46889999975 65532 3333335
Q ss_pred CeEEEEEe---CCCCEEEEEecCC
Q psy12614 246 DILALTVS---EDENYLYCAGVDP 266 (708)
Q Consensus 246 ~i~~~~~s---~~~~~l~~~~~dg 266 (708)
...+++|. |+++.|++++..+
T Consensus 256 ~p~~~a~~g~~~d~~~LyVt~~~~ 279 (306)
T 2p4o_A 256 GSTAVAFGQTEGDCTAIYVVTNGG 279 (306)
T ss_dssp TEEEEEECCSTTTTTEEEEEECTT
T ss_pred CceEEEEecccCCCCEEEEECCCC
Confidence 68999998 8988888776543
|
| >3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli} | Back alignment and structure |
|---|
Probab=98.68 E-value=2.3e-05 Score=71.83 Aligned_cols=204 Identities=10% Similarity=0.091 Sum_probs=139.1
Q ss_pred EecccccccEEEEEECCCCCEEEE-ecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEE-EEcCCCc
Q psy12614 149 KLLDRQQGRILCTAWHSSGDYLVT-GCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTII-TGDSGGF 225 (708)
Q Consensus 149 ~~~~~~~~~v~~~~~s~d~~~l~~-~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~-~~~~dg~ 225 (708)
+.+.+-...+..++|+|++..|++ ...+ .|...|.. ++.++++.... ......+++.+++.++ +.-.++.
T Consensus 20 ~~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g------~~D~EGIa~~~~g~~~vs~E~~~~ 92 (255)
T 3qqz_A 20 KEIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDF------VKDLETIEYIGDNQFVISDERDYA 92 (255)
T ss_dssp EECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSS------CSSEEEEEECSTTEEEEEETTTTE
T ss_pred eECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCC------CCChHHeEEeCCCEEEEEECCCCc
Confidence 466677778999999998877765 4455 99999987 99888887642 3557788999999854 4456778
Q ss_pred EEEEeCCCCee---EEEee------ccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeE
Q psy12614 226 VRFWDGKTGVQ---WSDVK------THKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSV 296 (708)
Q Consensus 226 i~~wd~~~~~~---~~~~~------~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~ 296 (708)
+.++++..... +.... ..+.....++|+|+++.|+++.......+|.+.. ...+. ......
T Consensus 93 l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g-----~~~~~-----~l~i~~ 162 (255)
T 3qqz_A 93 IYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNG-----LLSSN-----ELHISK 162 (255)
T ss_dssp EEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEES-----TTCSS-----CCEEEE
T ss_pred EEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcc-----cccCC-----ceeeec
Confidence 99988765432 22221 1345568999999998888887766666666642 00010 000000
Q ss_pred E--E--eccccceEEEEEe---CCEEEEEcCCCeEEEEeCCCCceeecC---------ccCCCCceEEEEcCCcEEEEEc
Q psy12614 297 N--R--VIHEGDVKSLALH---GNRLYSGGLDSYLSLSYYPPKTLVKYP---------CTLAQSTPVSLAKDIQHVLLQY 360 (708)
Q Consensus 297 ~--~--~~~~~~v~~l~~~---~~~l~s~~~d~~i~iw~~~~~~~~~~~---------~~~~~~~~~~~s~~~~~l~~~~ 360 (708)
. + ..+...+.+++++ +.+++....+..+..+|........+. ...+++..+++.++|++.+++.
T Consensus 163 ~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIvsE 242 (255)
T 3qqz_A 163 DKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIVSE 242 (255)
T ss_dssp CHHHHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTTCCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEEET
T ss_pred chhhccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCCCCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEEcC
Confidence 0 0 1123467888988 778888888899999998877533222 1135677899999999888888
Q ss_pred CCeEEEEEe
Q psy12614 361 TSHLELWSL 369 (708)
Q Consensus 361 ~~~i~i~~~ 369 (708)
.+.++.+.-
T Consensus 243 ~n~~y~f~~ 251 (255)
T 3qqz_A 243 PNRFYRFTP 251 (255)
T ss_dssp TTEEEEEEC
T ss_pred CceEEEEEe
Confidence 887766653
|
| >1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1 | Back alignment and structure |
|---|
Probab=98.66 E-value=4.2e-05 Score=80.59 Aligned_cols=193 Identities=11% Similarity=0.050 Sum_probs=118.6
Q ss_pred eCCEEEEEcCCCcEEEEECCCCeEeEEEeecCCce---------EEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEe
Q psy12614 80 FNDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTC---------WCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKL 150 (708)
Q Consensus 80 ~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v---------~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~ 150 (708)
.++.+++++.++.|.-+|..+|+.+..+....... ..+++ .+..+++++.++.|..+|..+|+......
T Consensus 67 ~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~--~~~~v~~~t~dg~l~AlD~~TG~~~W~~~ 144 (582)
T 1flg_A 67 SDGVIYVTASYSRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAI--YGDKVFFGTLDASVVALNKNTGKVVWKKK 144 (582)
T ss_dssp ETTEEEEEETTTEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEE--ETTEEEEEETTTEEEEEESSSCCEEEEEE
T ss_pred ECCEEEEEcCCCCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEE--ECCEEEEEeCCCEEEEEECCCCCEEeeec
Confidence 46777777764559999999999988876443210 12233 35578888899999999999999986655
Q ss_pred cccccc--cEE-EEEECC---CCC-EEEEecC------C-eEEEEEcCCCceEEEEEecccC-------------CCC--
Q psy12614 151 LDRQQG--RIL-CTAWHS---SGD-YLVTGCA------A-AVRVWDIHKGHAIHKMSLDKSS-------------KFS-- 201 (708)
Q Consensus 151 ~~~~~~--~v~-~~~~s~---d~~-~l~~~~~------d-~i~iwd~~~~~~~~~~~~~~~~-------------~~~-- 201 (708)
...+.. .+. ...... +++ .+++++. + .|..+|..+|+.+......... ..+
T Consensus 145 ~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~~~~~~~~~p~~~~~~~~~g~~g~~ 224 (582)
T 1flg_A 145 FADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRPFVEGHMGRLNGKDSTVTGDVKAP 224 (582)
T ss_dssp CSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEEESSTTCEEEETTEEEEESSCTTCT
T ss_pred CCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeecCCCccccccccCcccccccccccc
Confidence 543211 111 111111 233 5666542 5 8999999999998876532100 000
Q ss_pred -------------------CceeEEEEEEccCC-EEEEEcC--------------------C----CcEEEEeCCCCeeE
Q psy12614 202 -------------------KNTAVWCVAFCADF-TIITGDS--------------------G----GFVRFWDGKTGVQW 237 (708)
Q Consensus 202 -------------------~~~~v~~~~~~~~~-~l~~~~~--------------------d----g~i~~wd~~~~~~~ 237 (708)
....-..+++.|+. .++.+.. | +.|..+|..+|+.+
T Consensus 225 ~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~ 304 (582)
T 1flg_A 225 SWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVK 304 (582)
T ss_dssp TSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCEE
T ss_pred cCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCCCCEE
Confidence 00000134566554 5544432 2 58999999999988
Q ss_pred EEeec--cc--------cCeEEEEEe-CCCC---EEEEEecCCeEEEEEccC
Q psy12614 238 SDVKT--HK--------KDILALTVS-EDEN---YLYCAGVDPTVVCFQRTR 275 (708)
Q Consensus 238 ~~~~~--~~--------~~i~~~~~s-~~~~---~l~~~~~dg~i~iw~~~~ 275 (708)
-.++. |. .++ -+... .+|+ .++.++.+|.++++|..+
T Consensus 305 W~~q~~~~d~wd~~~~~~p~-l~~~~~~~G~~~~~v~~~~~~G~l~~lD~~t 355 (582)
T 1flg_A 305 WFYQHTPNDAWDFSGNNELV-LFDYKAKDGKIVKATAHADRNGFFYVVDRSN 355 (582)
T ss_dssp EEEESSTTCCSCCCCCCCCE-EEEEECSSSCEEEEEEEECTTSEEEEEETTT
T ss_pred EEEeCCCCCcccccCCCCcE-EEeeecCCCCEEEEEEEECCCceEEEEECCC
Confidence 77653 21 111 12222 4674 788899999999999988
|
| >3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ... | Back alignment and structure |
|---|
Probab=98.63 E-value=0.0019 Score=73.51 Aligned_cols=479 Identities=11% Similarity=0.059 Sum_probs=243.5
Q ss_pred CcEEEEECCCCeEeEEEeec-CCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCC---
Q psy12614 91 GFVNEYDMRRLNIKSSTAVT-SGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSS--- 166 (708)
Q Consensus 91 ~~i~vwd~~~~~~~~~~~~~-~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d--- 166 (708)
..|++.+...+..+..+... +..|...+.+. .+++.++ .+.+.++++..+++..... ..-...|.|+++.|.
T Consensus 492 ~~Irli~~~~~~~~~~w~~p~~~~I~~As~n~--~~vvva~-g~~l~~fel~~~~L~~~~~-~~l~~evscl~i~~~~~~ 567 (1158)
T 3ei3_A 492 ASVRLVSQEPKALVSEWKEPQAKNISVASCNS--SQVVVAV-GRALYYLQIHPQELRQISH-TEMEHEVACLDITPLGDS 567 (1158)
T ss_dssp SCEEEEESSSCCEEEEECCTTCCCCCEEEECS--SEEEEEE-TTEEEEEEEETTEEEEEEE-EECSSCEEEEECCCCSSS
T ss_pred CEEEEEECCCCeEEEEEECCCCCEEEEEEeCC--CEEEEEE-CCEEEEEEeeCCceeeecc-cCCCCceEEEEeecCCCC
Confidence 34667776665556555533 33576666553 4666664 6788888888765442222 223567999999864
Q ss_pred ---CCEEEEecC-C-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEcc-CC--EEEEEcCCCcEEEEeC--CCCee
Q psy12614 167 ---GDYLVTGCA-A-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCA-DF--TIITGDSGGFVRFWDG--KTGVQ 236 (708)
Q Consensus 167 ---~~~l~~~~~-d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~--~l~~~~~dg~i~~wd~--~~~~~ 236 (708)
+++++.|.. | +++|+++.+.+.+.....+. .....++.+.. ++ .+..|-.||.+..+.+ .+|+.
T Consensus 568 ~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~------~~~p~si~l~~~~~~~~L~igl~dG~l~~~~~d~~tg~l 641 (1158)
T 3ei3_A 568 NGLSPLCAIGLWTDISARILKLPSFELLHKEMLGG------EIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLL 641 (1158)
T ss_dssp TTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCS------SCCEEEEEEEEETTEEEEEEEETTSEEEEEEECTTTCCE
T ss_pred cccccEEEEEECCCCEEEEEECCCCCeEEEEECCC------CCCCcEEEEEEeCCCcEEEEEeCCCeEEEEEEcCCCCcc
Confidence 478999986 7 99999999877776555432 22333333322 33 3778889998765544 45544
Q ss_pred EEE--eeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEE-EEe--
Q psy12614 237 WSD--VKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSL-ALH-- 311 (708)
Q Consensus 237 ~~~--~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l-~~~-- 311 (708)
... ..-...++.-..+...+..-+.+..++...+|..+. . .... .-....+..+ .|+
T Consensus 642 ~d~r~~~LG~~pv~L~~~~~~~~~~V~a~s~rp~liy~~~~---------~-------l~~s--~l~~~~v~~~~~F~se 703 (1158)
T 3ei3_A 642 SDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNH---------K-------LVFS--NVNLKEVNYMCPLNSD 703 (1158)
T ss_dssp EEEEEEECCSSCCEEEEEESSSCEEEEEESSSCEEEEESSS---------S-------EEEE--EBSSSCCCEEEEECCS
T ss_pred ccceeEEcCCCceEEEEEeeCCceeEEEECCCCEEEEEcCC---------c-------eEEe--ccChHHhceEeccCcc
Confidence 322 111234554444544444434444455555554333 1 1111 1112233333 243
Q ss_pred --CCEEEEEcCCCeEEEEeCCCCc---eeecCccCCCCceEEEEcCCcEEEEEcCCeEEEEEecCCCC---C--------
Q psy12614 312 --GNRLYSGGLDSYLSLSYYPPKT---LVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQS---T-------- 375 (708)
Q Consensus 312 --~~~l~s~~~d~~i~iw~~~~~~---~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~---~-------- 375 (708)
.+-++..+ ++.++|..++... .++++ -...+..++++|+.+.++...... ..++...... .
T Consensus 704 ~~~~g~v~~~-~~~LrI~~i~~~~~~~~~~ip-L~~Tprri~y~~~~~~~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 780 (1158)
T 3ei3_A 704 GYPDSLALAN-NSTLTIGTIDEIQKLHIRTVP-LYESPRKICYQEVSQCFGVLSSRI-EVQDTSGGTTALRPSASTQALS 780 (1158)
T ss_dssp SSTTEEEEEC-SSCEEEEEECCSSSEEEEEEE-CSSEEEEEEEEGGGTEEEEEEEEE-EEECSSSSEEESSCCHHHHCSE
T ss_pred cCCCcEEEEc-CCceEEEEecccCCeeEEEEe-CCCCceEEEEcCCCCEEEEEEEec-cccccccccchhhhhhhhhhhh
Confidence 34555444 4558888775432 33333 233556788888877665432111 1111100000 0
Q ss_pred ----------CCC-------CC--CCCCcccCCCCceE-EEEEEecCCCceEEEE---eCCC-CcEEEEEc---------
Q psy12614 376 ----------DLS-------SH--SNTTGVPLLSFPRL-IVKMSAVNNATIRCSV---VSND-GKYVAYST--------- 422 (708)
Q Consensus 376 ----------~~~-------~~--~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~---~s~~-g~~l~~~~--------- 422 (708)
... +. ....+..+++.... +..........+.+++ |..+ ..++++|+
T Consensus 781 ~~~~~~~~~~~~~~~~~~~~g~~~~~s~i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~ 860 (1158)
T 3ei3_A 781 SSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAE 860 (1158)
T ss_dssp EEECCCCCC----------CCCEEEEEEEEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSS
T ss_pred hcccccccccccccCchhhcCCceeeEEEEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCC
Confidence 000 00 00001111111111 1222223344455554 3332 46787653
Q ss_pred --CCceEEEEEEecCCcceeEEeecCCcccccceeEEEEEecCCCeEEEEecCCc-EEEecCCCeEEEEEecCCCCCccC
Q psy12614 423 --ESCVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVLISADSTLLLAVSLNGP-LYIIDLSSLEIKYCVDPYKSNLMS 499 (708)
Q Consensus 423 --d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~~~~~dg~-i~~~~~~~~~~~~~~~~~~~~~~~ 499 (708)
.|.|.+|++.. .+ ++.+.+.+- ...+++++-- +|++|+ +-.... +|++.... .+. ... .+ .
T Consensus 861 ~~~Gri~vf~v~~--~k--L~lv~~~~v---~g~v~al~~~-~g~Lla-~ig~~l~vy~l~~~~--~L~-~~~--~~--~ 924 (1158)
T 3ei3_A 861 PKQGRIVVFQYSD--GK--LQTVAEKEV---KGAVYSMVEF-NGKLLA-SINSTVRLYEWTTEK--ELR-TEC--NH--Y 924 (1158)
T ss_dssp CCCEEEEEEEEET--TE--EEEEEEEEE---SSCEEEEEEE-TTEEEE-EETTEEEEEEECTTS--CEE-EEE--EE--C
T ss_pred CCceEEEEEEEEC--CE--EEEEEEEEc---CCcCEEEeee-CCEEEE-EcCCEEEEEECCCCc--eEE-EEe--ec--c
Confidence 36799999983 33 332221111 2244444422 455444 433333 89887652 222 110 00 1
Q ss_pred cceEEEEECCCCcEEEEEecCCeEEEEECC--c-eeee--cCCCCCCceEEEEcCCCCEEEEEecCCcEEEEEcCCCCCC
Q psy12614 500 DVISLVQMSECKQYIVCADRKSHVVIWKNG--Q-HHAS--LPRYRKPSTAMAIHPTLSTLVTVYSDHRIVEFDLNRKAFT 574 (708)
Q Consensus 500 ~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~--~-~~~~--~~~~~~~v~~l~~s~d~~~l~~~~~dg~i~vwd~~~~~~~ 574 (708)
..|..+.....+.++++|+.-..|.++..+ . .... -..+...++++.|-.+ ..++.++.+|.+.+...+.....
T Consensus 925 ~~i~~~~l~~~~~~I~vgD~~~Sv~~~~y~~~~~~L~~~a~D~~~~~vta~~~ld~-~t~l~aD~~gNl~vl~~~~~~~~ 1003 (1158)
T 3ei3_A 925 NNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDD-DNFLGAENAFNLFVCQKDSAATT 1003 (1158)
T ss_dssp CCSCEEEEEEETTEEEEEESSBCEEEEEEETTTTEEEEEEECCSCBCEEEEEEEET-TEEEEEETTSEEEEEEECTTCCS
T ss_pred ccEEEEEEeccCCEEEEEEhhheEEEEEEEcCCCeEEEEEeecccccEEEEEEEcc-CcEEEEcCCCcEEEEecCCCCCC
Confidence 123333333367899999977777776554 2 1111 1334567889988755 46777999999999988764333
Q ss_pred chhhhhhccCchhhhcCCCCeeEEE---eCCCC---------CceEEEEcCeeEEEE
Q psy12614 575 TFSRKLETNHPNEWLSRQLPVLGIE---FDPQD---------SSLIYLMDDSALCVI 619 (708)
Q Consensus 575 ~~~~~~~~~~~~~~~~~~~~i~~l~---~s~~~---------~~l~~~~~d~~i~~w 619 (708)
.+.+.. ......+ -..+.|+++. +.+.+ ..++.++.+|.|.+.
T Consensus 1004 ~~~~~~-L~~~~~f-hlG~~vt~~~~~sl~~~~~~~~~~~~~~~il~~T~~GsIg~l 1058 (1158)
T 3ei3_A 1004 DEERQH-LQEVGLF-HLGEFVNVFCHGSLVMQNLGETSTPTQGSVLFGTVNGMIGLV 1058 (1158)
T ss_dssp TTGGGB-EEEEEEE-ECSSCEEEEEECCSCCC-------CEEEEEEEEETTSCEEEE
T ss_pred ccccce-eeeEEEE-eCCCcEeeEEeeeeecCCCccccccccceEEEEecCCEEEEE
Confidence 221100 0011111 1234566665 33332 347788889998876
|
| >3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli} | Back alignment and structure |
|---|
Probab=98.62 E-value=6.2e-05 Score=68.98 Aligned_cols=218 Identities=13% Similarity=0.076 Sum_probs=142.9
Q ss_pred Cccceeeeee-eeccCCCCcEEEEEEcCCCCEEE-EEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe-CCEE-E
Q psy12614 10 TMGTYGVHNI-KFYAPEPKVINCIACEPKSSRLA-VSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF-NDRL-F 85 (708)
Q Consensus 10 ~~~~~~~~~~-~~~~~h~~~v~~~~~s~~~~~la-~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~-~~~l-~ 85 (708)
.+..+++.-. +-+.+-.+.+..++++|+++.|. +...++.|...|.. ++.+.+.-.+-. .....|++. ++.+ +
T Consensus 9 ~l~~y~~~~~~~~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~--~D~EGIa~~~~g~~~v 85 (255)
T 3qqz_A 9 SFQNYHATIDGKEIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFV--KDLETIEYIGDNQFVI 85 (255)
T ss_dssp CCTTCEEEEEEEECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSC--SSEEEEEECSTTEEEE
T ss_pred CccceEEEEeceECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCC--CChHHeEEeCCCEEEE
Confidence 4555666554 56778878999999999876554 57778899999998 777663322323 578999998 4444 5
Q ss_pred EEcCCCcEEEEECCCCeE---eEEEe------ecCCceEEEEEecCCCEEEEEeCCCcEEEEEccC----CcEEEEEe--
Q psy12614 86 SGGLQGFVNEYDMRRLNI---KSSTA------VTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISD----EGLLYEKL-- 150 (708)
Q Consensus 86 s~~~d~~i~vwd~~~~~~---~~~~~------~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~----~~~~~~~~-- 150 (708)
+.-.++.+.++++..... +.... ........++|+|+++.|.++.+.....+|.+.. ........
T Consensus 86 s~E~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~ 165 (255)
T 3qqz_A 86 SDERDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKA 165 (255)
T ss_dssp EETTTTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHH
T ss_pred EECCCCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchh
Confidence 555678899998766442 22221 1234468999999998888777766666666652 11211011
Q ss_pred c--ccccccEEEEEECCCCCEEEEecCC--eEEEEEcCCCceEEEEEecccCC--CCCceeEEEEEEccCCEEEEEcCCC
Q psy12614 151 L--DRQQGRILCTAWHSSGDYLVTGCAA--AVRVWDIHKGHAIHKMSLDKSSK--FSKNTAVWCVAFCADFTIITGDSGG 224 (708)
Q Consensus 151 ~--~~~~~~v~~~~~s~d~~~l~~~~~d--~i~iwd~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~l~~~~~dg 224 (708)
+ ..+...+.++++.|....|+..+.. .+..+|.. |+.+..+......+ ...-.....|+|.++|++...+..+
T Consensus 166 ~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIvsE~n 244 (255)
T 3qqz_A 166 LQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIVSEPN 244 (255)
T ss_dssp HHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEEETTT
T ss_pred hccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEEcCCc
Confidence 1 1123457899999987666655554 89999965 67777777653111 0012467899999999877777777
Q ss_pred cEEEEeC
Q psy12614 225 FVRFWDG 231 (708)
Q Consensus 225 ~i~~wd~ 231 (708)
.++.+.-
T Consensus 245 ~~y~f~~ 251 (255)
T 3qqz_A 245 RFYRFTP 251 (255)
T ss_dssp EEEEEEC
T ss_pred eEEEEEe
Confidence 7776653
|
| >3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=98.54 E-value=9.5e-05 Score=73.76 Aligned_cols=233 Identities=9% Similarity=-0.028 Sum_probs=145.9
Q ss_pred CcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEE-EEcCCCcEEEEECCCCeE
Q psy12614 27 KVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLF-SGGLQGFVNEYDMRRLNI 103 (708)
Q Consensus 27 ~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~-s~~~d~~i~vwd~~~~~~ 103 (708)
+.-+|.+..+. .+|+.+. ...|+..++..+.... ...+. ..+.+++|. ++.|+ +-...+.|..+++..+..
T Consensus 77 d~~~C~~~~~~-~~l~~~~-~~~I~~i~~~~~~~~~-~~~~~---~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~ 150 (386)
T 3v65_B 77 DRRSCKALGPE-PVLLFAN-RIDIRQVLPHRSEYTL-LLNNL---ENAIALDFHHRRELVFWSDVTLDRILRANLNGSNV 150 (386)
T ss_dssp TSSCEEECSSC-CEEEEEC-BSCEEEECTTSCCCEE-EECSC---SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCE
T ss_pred CCCeECCcccc-ceeEeec-CccceeeccCCCcEEE-EecCC---CccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCc
Confidence 34556666663 4555543 4579999988766543 44433 568899999 55555 445678899999987664
Q ss_pred eEEEeecCCceEEEEEecCCCEEEEE-eCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC---eEE
Q psy12614 104 KSSTAVTSGTCWCLSVHKKKRLLAAG-TEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA---AVR 179 (708)
Q Consensus 104 ~~~~~~~~~~v~~~~~s~~~~~la~~-~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d---~i~ 179 (708)
...+.........+++.+.+..|..+ ...+.|.+.++...... ..+...-.....+++.|.+..|+.+... .|.
T Consensus 151 ~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~--~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~ 228 (386)
T 3v65_B 151 EEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRK--VLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIE 228 (386)
T ss_dssp EEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCE--EEECSSCSCEEEEEEETTTTEEEEEECSSSCEEE
T ss_pred EEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceE--EeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEE
Confidence 44443333456789999866655544 44678888888765543 2233333567899999987777655432 677
Q ss_pred EEEcCCCceEEEEEecccCCCCCceeEEEEEEccCC-EEE-EEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCC
Q psy12614 180 VWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADF-TII-TGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDEN 257 (708)
Q Consensus 180 iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~-~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~ 257 (708)
..++.. .....+... .......++++|++ +|. +-...+.|..+|+........+.........+++. ++.
T Consensus 229 r~~~dG-~~~~~~~~~------~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~giav~-~~~ 300 (386)
T 3v65_B 229 ASSMDG-SGRRIIADT------HLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITVF-EDS 300 (386)
T ss_dssp EEETTS-CSCEEEECS------SCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECSSCSSEEEEEEE-TTE
T ss_pred EEeCCC-CCcEEEEEC------CCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECCCCCceEEEEE-CCE
Confidence 777653 333333221 14457899999755 554 44556789999986443333333334456778883 444
Q ss_pred EEEEEecCCeEEEEEccC
Q psy12614 258 YLYCAGVDPTVVCFQRTR 275 (708)
Q Consensus 258 ~l~~~~~dg~i~iw~~~~ 275 (708)
.+++-...+.|..++..+
T Consensus 301 ly~td~~~~~V~~~~~~~ 318 (386)
T 3v65_B 301 LYWTDWHTKSINSANKFT 318 (386)
T ss_dssp EEEEETTTTEEEEEETTT
T ss_pred EEEeeCCCCeEEEEECCC
Confidence 445555567888888655
|
| >3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=98.53 E-value=0.00016 Score=70.96 Aligned_cols=235 Identities=9% Similarity=-0.022 Sum_probs=147.0
Q ss_pred CCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEE-cCCCcEEEEECCCC
Q psy12614 25 EPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSG-GLQGFVNEYDMRRL 101 (708)
Q Consensus 25 h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~-~~d~~i~vwd~~~~ 101 (708)
+++..+|.+..++. +|..+. ...|+..++....... .+.+. ..+.+++|. ++.|+.+ ...+.|..+++..+
T Consensus 32 ~~d~~~C~~~~~~~-~ll~~~-~~~I~~i~~~g~~~~~-~~~~~---~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~ 105 (349)
T 3v64_C 32 RPDRRSCKALGPEP-VLLFAN-RIDIRQVLPHRSEYTL-LLNNL---ENAIALDFHHRRELVFWSDVTLDRILRANLNGS 105 (349)
T ss_dssp CTTSSCEEESSSCC-EEEEEC-BSCEEEECTTSCCEEE-EECSC---SCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred CCCCCcccccccCc-eeEeec-ccceEEEeCCCCeeEE-eecCC---CceEEEEEeccccEEEEEeccCCceEEEecCCC
Confidence 35567788887744 555543 3468888887665432 44433 468999998 5555544 56788999999876
Q ss_pred eEeEEEeecCCceEEEEEecCCCEEEE-EeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC---e
Q psy12614 102 NIKSSTAVTSGTCWCLSVHKKKRLLAA-GTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA---A 177 (708)
Q Consensus 102 ~~~~~~~~~~~~v~~~~~s~~~~~la~-~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d---~ 177 (708)
.....+.........+++.+.+..|.. -...+.|.+.+....... ..+...-.....+++.|.+..|+..... .
T Consensus 106 ~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~--~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~ 183 (349)
T 3v64_C 106 NVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRK--VLLWQSLEKPRAIALHPMEGTIYWTDWGNTPR 183 (349)
T ss_dssp SCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCE--EEECTTCSCEEEEEEETTTTEEEEEECSSSCE
T ss_pred CceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceE--EEEeCCCCCcceEEEecCcCeEEEeccCCCCE
Confidence 544433333345678999986655544 445678999998866543 2233334567899999977666655432 6
Q ss_pred EEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCC-EEE-EEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCC
Q psy12614 178 VRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADF-TII-TGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSED 255 (708)
Q Consensus 178 i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~-~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~ 255 (708)
|...++.. .....+... .......++++|++ +|. +-...+.|..+|+........+.........+++. +
T Consensus 184 I~r~~~dG-~~~~~~~~~------~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~giav~-~ 255 (349)
T 3v64_C 184 IEASSMDG-SGRRIIADT------HLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITVF-E 255 (349)
T ss_dssp EEEEETTS-CSCEESCCS------SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEE-T
T ss_pred EEEEeCCC-CCcEEEEEC------CCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeCCCCCceEEEEE-C
Confidence 77777653 333322211 14457899999755 654 44556789999986433333333334456778873 4
Q ss_pred CCEEEEEecCCeEEEEEccC
Q psy12614 256 ENYLYCAGVDPTVVCFQRTR 275 (708)
Q Consensus 256 ~~~l~~~~~dg~i~iw~~~~ 275 (708)
+...++-...+.|..++..+
T Consensus 256 ~~ly~td~~~~~V~~~~~~~ 275 (349)
T 3v64_C 256 DSLYWTDWHTKSINSANKFT 275 (349)
T ss_dssp TEEEEEETTTTEEEEEETTT
T ss_pred CEEEEecCCCCeEEEEEccC
Confidence 44444444567788887555
|
| >2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3 | Back alignment and structure |
|---|
Probab=98.52 E-value=0.00019 Score=69.26 Aligned_cols=231 Identities=16% Similarity=0.116 Sum_probs=139.0
Q ss_pred eEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC---eE
Q psy12614 102 NIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA---AV 178 (708)
Q Consensus 102 ~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d---~i 178 (708)
+.+..+.. ......++|+++++++++-..++.|..||..+.... .+. .......+++.++|+++++.... .|
T Consensus 23 ~~~~~~p~-~~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~~~~---~~~-~~~~p~gia~~~dG~l~vad~~~~~~~v 97 (306)
T 2p4o_A 23 KIITSFPV-NTFLENLASAPDGTIFVTNHEVGEIVSITPDGNQQI---HAT-VEGKVSGLAFTSNGDLVATGWNADSIPV 97 (306)
T ss_dssp EEEEEECT-TCCEEEEEECTTSCEEEEETTTTEEEEECTTCCEEE---EEE-CSSEEEEEEECTTSCEEEEEECTTSCEE
T ss_pred eEeEeCCC-CCCcceEEECCCCCEEEEeCCCCeEEEECCCCceEE---EEe-CCCCceeEEEcCCCcEEEEeccCCcceE
Confidence 34444432 256788999999987666667889999998764322 221 23568899999999976665432 47
Q ss_pred EEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEEEE-cCCCcEEEEeCCCCee-EEEee---------ccccCe
Q psy12614 179 RVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITG-DSGGFVRFWDGKTGVQ-WSDVK---------THKKDI 247 (708)
Q Consensus 179 ~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~-~~dg~i~~wd~~~~~~-~~~~~---------~~~~~i 247 (708)
..+|..+++......... ......++..+++.+++. ..++.|+++|..+++. +.... ..-...
T Consensus 98 ~~~d~~~g~~~~~~~~~~------~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~p 171 (306)
T 2p4o_A 98 VSLVKSDGTVETLLTLPD------AIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAA 171 (306)
T ss_dssp EEEECTTSCEEEEEECTT------CSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSE
T ss_pred EEEcCCCCeEEEEEeCCC------ccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcC
Confidence 777877877644333221 223455566667764444 4588999999876532 21110 111233
Q ss_pred EEEEEeCCCCEEEEEe-cCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEEEcCCCeE
Q psy12614 248 LALTVSEDENYLYCAG-VDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSGGLDSYL 324 (708)
Q Consensus 248 ~~~~~s~~~~~l~~~~-~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~~~d~~i 324 (708)
..+ ++++++|+.+. ..+.|..|++... +. ... ...+. .......++++ |+++++....+.|
T Consensus 172 ngi--s~dg~~lyv~d~~~~~I~~~~~~~~-------g~-~~~-----~~~~~-~~~~P~gi~vd~dG~l~va~~~~~~V 235 (306)
T 2p4o_A 172 NGL--KRFGNFLYVSNTEKMLLLRIPVDST-------DK-PGE-----PEIFV-EQTNIDDFAFDVEGNLYGATHIYNSV 235 (306)
T ss_dssp EEE--EEETTEEEEEETTTTEEEEEEBCTT-------SC-BCC-----CEEEE-ESCCCSSEEEBTTCCEEEECBTTCCE
T ss_pred CCc--CcCCCEEEEEeCCCCEEEEEEeCCC-------CC-CCc-----cEEEe-ccCCCCCeEECCCCCEEEEeCCCCeE
Confidence 455 78887776665 4678999998640 11 000 01111 11345567777 6666666667889
Q ss_pred EEEeCCCCc--eeecCccCCCCceEEEE---cCCcEEEEE
Q psy12614 325 SLSYYPPKT--LVKYPCTLAQSTPVSLA---KDIQHVLLQ 359 (708)
Q Consensus 325 ~iw~~~~~~--~~~~~~~~~~~~~~~~s---~~~~~l~~~ 359 (708)
.+++..... +..+..+...+.++++. ++++.|.+.
T Consensus 236 ~~~~~~G~~~~~~~~~~~~~~p~~~a~~g~~~d~~~LyVt 275 (306)
T 2p4o_A 236 VRIAPDRSTTIIAQAEQGVIGSTAVAFGQTEGDCTAIYVV 275 (306)
T ss_dssp EEECTTCCEEEEECGGGTCTTEEEEEECCSTTTTTEEEEE
T ss_pred EEECCCCCEEEEeecccccCCceEEEEecccCCCCEEEEE
Confidence 999986443 22333334567788898 787666554
|
| >1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 | Back alignment and structure |
|---|
Probab=98.51 E-value=0.00025 Score=68.53 Aligned_cols=206 Identities=11% Similarity=0.024 Sum_probs=130.0
Q ss_pred CCcEEEEEEcCCCCEEEEE-eCCCcEEEEeCCC---CCeEEEEEecCCCCCcEEEEEEe--CCEE-EEEcCCCcEEEEEC
Q psy12614 26 PKVINCIACEPKSSRLAVS-RADQSIEIWDISE---TPHVDRVFIGDPLSNSIECLTWF--NDRL-FSGGLQGFVNEYDM 98 (708)
Q Consensus 26 ~~~v~~~~~s~~~~~la~~-~~dg~v~iwd~~~---~~~~~~~~~~h~~~~~v~~l~~~--~~~l-~s~~~d~~i~vwd~ 98 (708)
-..+..++|++++..|..+ ..++.|..+++.. +......+.... .....+++. ++.| ++-...+.|.+.++
T Consensus 29 ~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~--~~p~glavd~~~~~ly~~d~~~~~I~~~~~ 106 (316)
T 1ijq_A 29 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDI--QAPDGLAVDWIHSNIYWTDSVLGTVSVADT 106 (316)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSC--SCCCEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred CCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCC--CCcCEEEEeecCCeEEEEECCCCEEEEEeC
Confidence 4567899999977666655 4468899999876 122222343332 345788887 5555 45567889999998
Q ss_pred CCCeEeEEEeecCCceEEEEEecCCCEEEEEeCC--CcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC
Q psy12614 99 RRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQ--GHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA 176 (708)
Q Consensus 99 ~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d--~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d 176 (708)
........+.........++++|.+..|..+... +.|...+....... ......-.....+++++++..|+.+...
T Consensus 107 ~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~--~~~~~~~~~P~gla~d~~~~~lY~~D~~ 184 (316)
T 1ijq_A 107 KGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIY--SLVTENIQWPNGITLDLLSGRLYWVDSK 184 (316)
T ss_dssp TSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEE--EEECSSCSCEEEEEEETTTTEEEEEETT
T ss_pred CCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeE--EEEECCCCCceEEEEeccCCEEEEEECC
Confidence 8654443344344678899999977766655542 67888888655442 1222233567899999988888776654
Q ss_pred --eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCeeEEEee
Q psy12614 177 --AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDVK 241 (708)
Q Consensus 177 --~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~~ 241 (708)
.|..+|+.. .....+.... ........+++.. +. +++-...+.|..++..+|+.+..+.
T Consensus 185 ~~~I~~~d~dg-~~~~~~~~~~----~~~~~P~giav~~-~~ly~~d~~~~~V~~~~~~~g~~~~~i~ 246 (316)
T 1ijq_A 185 LHSISSIDVNG-GNRKTILEDE----KRLAHPFSLAVFE-DKVFWTDIINEAIFSANRLTGSDVNLLA 246 (316)
T ss_dssp TTEEEEEETTS-CSCEEEEECT----TTTSSEEEEEEET-TEEEEEETTTTEEEEEETTTCCCCEEEE
T ss_pred CCeEEEEecCC-CceEEEeecC----CccCCcEEEEEEC-CEEEEEECCCCeEEEEeCCCCcceEEEe
Confidence 899999864 3333333211 0123456777753 55 5566667889999877776655553
|
| >3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=98.49 E-value=0.0002 Score=70.33 Aligned_cols=202 Identities=8% Similarity=-0.052 Sum_probs=129.8
Q ss_pred CcEEEEEEcCCCCEEEEE-eCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEE-EEEcCCCcEEEEECCCCe
Q psy12614 27 KVINCIACEPKSSRLAVS-RADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRL-FSGGLQGFVNEYDMRRLN 102 (708)
Q Consensus 27 ~~v~~~~~s~~~~~la~~-~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l-~s~~~d~~i~vwd~~~~~ 102 (708)
..+..++|++.+..|... ...+.|..+++..+.... .+.... .....+++. ++.| ++-...+.|.+.+++...
T Consensus 73 ~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~-~~~~~~--~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~ 149 (349)
T 3v64_C 73 ENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEE-VVSTGL--ESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAH 149 (349)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE-EECSSC--SCCCEEEEETTTTEEEEEETTTTEEEEEETTSCS
T ss_pred CceEEEEEeccccEEEEEeccCCceEEEecCCCCceE-EEeCCC--CCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCc
Confidence 446789999876666655 456789999988765433 333322 345677777 4444 555667899999987654
Q ss_pred EeEEEeecCCceEEEEEecCCCEEEEEeC-C-CcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC--eE
Q psy12614 103 IKSSTAVTSGTCWCLSVHKKKRLLAAGTE-Q-GHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA--AV 178 (708)
Q Consensus 103 ~~~~~~~~~~~v~~~~~s~~~~~la~~~~-d-~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d--~i 178 (708)
....+.........++++|.+..|..... . +.|..++....... ......-.....++++|++..|+.+... .|
T Consensus 150 ~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~--~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I 227 (349)
T 3v64_C 150 RKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRR--IIADTHLFWPNGLTIDYAGRRMYWVDAKHHVI 227 (349)
T ss_dssp CEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCE--ESCCSSCSCEEEEEEETTTTEEEEEETTTTEE
T ss_pred eEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcE--EEEECCCCCcceEEEeCCCCEEEEEECCCCEE
Confidence 33333333456789999997666655443 4 77888888765543 2222234567899999988877776654 89
Q ss_pred EEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCeeEEEee
Q psy12614 179 RVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDVK 241 (708)
Q Consensus 179 ~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~~ 241 (708)
..+|+.. .....+.... ......+++. ++. +++-...+.|..++..+|+....+.
T Consensus 228 ~~~~~dG-~~~~~~~~~~------~~~P~giav~-~~~ly~td~~~~~V~~~~~~~G~~~~~i~ 283 (349)
T 3v64_C 228 ERANLDG-SHRKAVISQG------LPHPFAITVF-EDSLYWTDWHTKSINSANKFTGKNQEIIR 283 (349)
T ss_dssp EEEETTS-CSCEEEECSS------CSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred EEEeCCC-CceEEEEeCC------CCCceEEEEE-CCEEEEecCCCCeEEEEEccCCCccEEec
Confidence 9999864 3333332211 3345677773 444 5555667788888866676555554
|
| >3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L | Back alignment and structure |
|---|
Probab=98.46 E-value=0.00038 Score=69.65 Aligned_cols=219 Identities=11% Similarity=0.045 Sum_probs=139.8
Q ss_pred CCCcEEEEEEcCCCCEEEEEe-CCCcEEEEeCCCCC---eEEEEEecCCCCCcEEEEEEe--CCEEE-EEcCCCcEEEEE
Q psy12614 25 EPKVINCIACEPKSSRLAVSR-ADQSIEIWDISETP---HVDRVFIGDPLSNSIECLTWF--NDRLF-SGGLQGFVNEYD 97 (708)
Q Consensus 25 h~~~v~~~~~s~~~~~la~~~-~dg~v~iwd~~~~~---~~~~~~~~h~~~~~v~~l~~~--~~~l~-s~~~d~~i~vwd 97 (708)
....+..++|++.+..|.... ..+.|..+++.... .....+.... .....|++. ++.|+ +-...+.|.+.+
T Consensus 110 ~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~--~~p~glavD~~~~~lY~~d~~~~~I~~~~ 187 (400)
T 3p5b_L 110 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDI--QAPDGLAVDWIHSNIYWTDSVLGTVSVAD 187 (400)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSC--SCEEEEEEETTTTEEEEEETTTTEEEEEC
T ss_pred ccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCC--CCcccEEEEecCCceEEEECCCCeEEEEe
Confidence 345788999998776666654 46788889887521 1222333333 567888888 45554 556678999999
Q ss_pred CCCCeEeEEEeecCCceEEEEEecCCCEEEEEeC--CCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecC
Q psy12614 98 MRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTE--QGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCA 175 (708)
Q Consensus 98 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~--d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~ 175 (708)
++.......+.........|++.|.+.+|+.... .+.|...++...... ......-.....|++++++..|+.+..
T Consensus 188 ~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~--~~~~~~l~~P~glavd~~~~~lY~aD~ 265 (400)
T 3p5b_L 188 TKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIY--SLVTENIQWPNGITLDLLSGRLYWVDS 265 (400)
T ss_dssp TTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCE--EEECSSCSCEEEEEEETTTTEEEEEET
T ss_pred CCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccE--EEEECCCCceEEEEEEeCCCEEEEEEC
Confidence 8876555445444556889999997777766542 367888888765543 222333356789999998888887765
Q ss_pred C--eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEE
Q psy12614 176 A--AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTV 252 (708)
Q Consensus 176 d--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~ 252 (708)
. .|..+|+... ....+.... ........+++..+.-+++-...+.|..+|..+|+.+..+.........+.+
T Consensus 266 ~~~~I~~~d~dG~-~~~~~~~~~----~~l~~P~gl~v~~~~lywtd~~~~~V~~~~~~~G~~~~~i~~~~~~p~~i~v 339 (400)
T 3p5b_L 266 KLHSISSIDVNGG-NRKTILEDE----KRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLAENLLSPEDMVL 339 (400)
T ss_dssp TTTEEEEEETTSC-CCEEEEECS----STTSSEEEEEEETTEEEEEESSSCSEEEEESSSCCCCEEEECSCSCEEEEEE
T ss_pred CCCEEEEEeCCCC-ccEEEEeCC----CCCCCCEEEEEeCCEEEEecCCCCeEEEEEcCCCCceEEEecCCCCCceEEE
Confidence 4 8999998643 333333221 1123455777744433556667788999997778776666543333444443
|
| >3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=98.44 E-value=0.00011 Score=74.35 Aligned_cols=151 Identities=11% Similarity=0.015 Sum_probs=98.8
Q ss_pred ceEEEEEec-CCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecC-----C-eEEEEEcCC
Q psy12614 113 TCWCLSVHK-KKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCA-----A-AVRVWDIHK 185 (708)
Q Consensus 113 ~v~~~~~s~-~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~-----d-~i~iwd~~~ 185 (708)
....++++| ++..|.++...+.|+.+|..++.+. .+.........++|++++++|+.+.. . .+...+. .
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~---~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~-~ 213 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVS---TVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTR-E 213 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEE---EEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG-G
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEE---EEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC-C
Confidence 457899998 4556666665588999999887764 22234556889999999996666654 2 3444443 3
Q ss_pred CceE--EEEEecccCCCCCceeEEEEEEcc-CCEEE-EEcCCCcEEEEeCCCCeeEEEeec-cccCeEEEEEeCCCCEEE
Q psy12614 186 GHAI--HKMSLDKSSKFSKNTAVWCVAFCA-DFTII-TGDSGGFVRFWDGKTGVQWSDVKT-HKKDILALTVSEDENYLY 260 (708)
Q Consensus 186 ~~~~--~~~~~~~~~~~~~~~~v~~~~~~~-~~~l~-~~~~dg~i~~wd~~~~~~~~~~~~-~~~~i~~~~~s~~~~~l~ 260 (708)
+... ..+.. ......+++.| +|.++ +-..++.|..++...+........ .......++|+|++++|+
T Consensus 214 g~~~~~~~l~~--------~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~ly 285 (430)
T 3tc9_A 214 SGFKVITELTK--------GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAY 285 (430)
T ss_dssp GTSCSEEEEEE--------CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEE
T ss_pred Cceeeeeeecc--------CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEE
Confidence 3322 22221 23356788999 67755 445678999999887654222221 223567899999999666
Q ss_pred EEe-cCCeEEEEEccC
Q psy12614 261 CAG-VDPTVVCFQRTR 275 (708)
Q Consensus 261 ~~~-~dg~i~iw~~~~ 275 (708)
.+. ..+.|..++...
T Consensus 286 v~d~~~~~I~~~~~d~ 301 (430)
T 3tc9_A 286 IVVVNQHYILRSDYDW 301 (430)
T ss_dssp EEETTTTEEEEEEEET
T ss_pred EEECCCCEEEEEeCCc
Confidence 554 567899988764
|
| >1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A | Back alignment and structure |
|---|
Probab=98.41 E-value=3.8e-05 Score=82.98 Aligned_cols=273 Identities=13% Similarity=0.042 Sum_probs=151.1
Q ss_pred EEEEcC-CCCEEEEEeCCC-----------cEEEEeCCCCCeEE-EEEe-cCCCCCcEEEEEEe--CCEEEEEcC-CCcE
Q psy12614 31 CIACEP-KSSRLAVSRADQ-----------SIEIWDISETPHVD-RVFI-GDPLSNSIECLTWF--NDRLFSGGL-QGFV 93 (708)
Q Consensus 31 ~~~~s~-~~~~la~~~~dg-----------~v~iwd~~~~~~~~-~~~~-~h~~~~~v~~l~~~--~~~l~s~~~-d~~i 93 (708)
++++.| ++++++.|+.+. .+.+||..+++... ..+. .+. ....++++. +..++.|+. ++.+
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~--~~~~~~~~~~~g~lyv~GG~~~~~v 267 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHD--MFCPGISMDGNGQIVVTGGNDAKKT 267 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCC--CSSCEEEECTTSCEEEECSSSTTCE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCC--CccccccCCCCCCEEEeCCCCCCce
Confidence 567777 889999887543 58999999876432 1222 222 333445655 777788874 5689
Q ss_pred EEEECCCCeEeEEEeecCC-ceEEEEEecCCCEEEEEe-CC-----CcEEEEEccCCcEEEEEec--ccccccEEEEEEC
Q psy12614 94 NEYDMRRLNIKSSTAVTSG-TCWCLSVHKKKRLLAAGT-EQ-----GHINLFQISDEGLLYEKLL--DRQQGRILCTAWH 164 (708)
Q Consensus 94 ~vwd~~~~~~~~~~~~~~~-~v~~~~~s~~~~~la~~~-~d-----~~i~iwd~~~~~~~~~~~~--~~~~~~v~~~~~s 164 (708)
.+||..+.+-...-..+.. .-.+++..++++.++.|+ .+ ..+.+||..++........ ......-....+.
T Consensus 268 ~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~ 347 (656)
T 1k3i_A 268 SLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYR 347 (656)
T ss_dssp EEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGT
T ss_pred EEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccccccceee
Confidence 9999888754322121212 223566677999999988 34 5699999998876521000 0000000001122
Q ss_pred CCCCEEEEec----------CCeEEEEEcCCCceEEEEEecccC---CCCCceeEEEEEEcc-CCE-EEEEcCCC-----
Q psy12614 165 SSGDYLVTGC----------AAAVRVWDIHKGHAIHKMSLDKSS---KFSKNTAVWCVAFCA-DFT-IITGDSGG----- 224 (708)
Q Consensus 165 ~d~~~l~~~~----------~d~i~iwd~~~~~~~~~~~~~~~~---~~~~~~~v~~~~~~~-~~~-l~~~~~dg----- 224 (708)
.++...+.++ .+.+..||..+............. . .....-.++.|.. +++ ++.|+.++
T Consensus 348 ~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~-~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~ 426 (656)
T 1k3i_A 348 SDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVA-PDAMCGNAVMYDAVKGKILTFGGSPDYQDSD 426 (656)
T ss_dssp TTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEEC-CCCBTCEEEEEETTTTEEEEECCBSSSSSSB
T ss_pred cCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccC-CCCCCCceEeccCCCCeEEEEeCCCCCCCCC
Confidence 3333333332 226889998887655433322100 0 0011223444433 666 56666432
Q ss_pred ------cEEEEeCCCCeeEEEe--eccccC-eEEEEEeCCCCEEEEEecC-----------CeEEEEEccCCcccccCCC
Q psy12614 225 ------FVRFWDGKTGVQWSDV--KTHKKD-ILALTVSEDENYLYCAGVD-----------PTVVCFQRTRKPQVCSTSG 284 (708)
Q Consensus 225 ------~i~~wd~~~~~~~~~~--~~~~~~-i~~~~~s~~~~~l~~~~~d-----------g~i~iw~~~~~~~~~~~~g 284 (708)
.|.+||..+.+-.... ..+... -.+++..|+++.++.|+.+ ..+.+||..+ +
T Consensus 427 ~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t--------~ 498 (656)
T 1k3i_A 427 ATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQ--------D 498 (656)
T ss_dssp CCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGG--------T
T ss_pred cCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCC--------C
Confidence 6788888776544332 112222 2355677899999998864 4688999877 3
Q ss_pred CCCCCcceEEeEEEeccccceEEEEE--eCCEEEEEcC
Q psy12614 285 PEQGSSVWVRSVNRVIHEGDVKSLAL--HGNRLYSGGL 320 (708)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~v~~l~~--~~~~l~s~~~ 320 (708)
+|.....+........+..+ .++.++.||.
T Consensus 499 ------~W~~~~~~~~~R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 499 ------TFYKQNPNSIVRVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp ------EEEECCCCSSCCCTTEEEEECTTSCEEEEECC
T ss_pred ------ceeecCCCCCccccccHhhcCCCcEEEecCCC
Confidence 45544333222222223333 2778888774
|
| >4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=98.41 E-value=0.00017 Score=72.96 Aligned_cols=239 Identities=10% Similarity=0.032 Sum_probs=138.0
Q ss_pred cEEEEEEcCC--CCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCC-----cEEEEEC
Q psy12614 28 VINCIACEPK--SSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQG-----FVNEYDM 98 (708)
Q Consensus 28 ~v~~~~~s~~--~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~-----~i~vwd~ 98 (708)
....++++|+ +..|.++...+.|+.+|..++... .+.+.. .....++++ ++ |+.+...+ .+...+.
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~--~~~~~~--~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~ 214 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVD--IKTTNI--GQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTR 214 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEE--EECCCC--SCEEEEEECTTCC-EEEEECCSCTTSEEEEEECG
T ss_pred CCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEE--EeecCC--CCccEEEECCCCC-EEEEcCCCCcccceEEEEEC
Confidence 4568999995 445555544489999999877654 334444 678999999 66 55554321 2333332
Q ss_pred CCCeEe-EEEeecCCceEEEEEec-CCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecC-
Q psy12614 99 RRLNIK-SSTAVTSGTCWCLSVHK-KKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCA- 175 (708)
Q Consensus 99 ~~~~~~-~~~~~~~~~v~~~~~s~-~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~- 175 (708)
..+... ..+. .......++++| +|.+.++-..++.|+.+|..++.........+....-..++|+|++++|+.+..
T Consensus 215 ~~~~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~ 293 (433)
T 4hw6_A 215 ASGFTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNG 293 (433)
T ss_dssp GGTTCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETT
T ss_pred CCCeecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCC
Confidence 222110 1122 234567789999 666555555678899999887766211111112233357999999996666554
Q ss_pred C-eEEEEEcC--CCce--EEEEEec--ccCC------CCCceeEEEEEE---------ccCCEEEEE-cCCCcEEEEeCC
Q psy12614 176 A-AVRVWDIH--KGHA--IHKMSLD--KSSK------FSKNTAVWCVAF---------CADFTIITG-DSGGFVRFWDGK 232 (708)
Q Consensus 176 d-~i~iwd~~--~~~~--~~~~~~~--~~~~------~~~~~~v~~~~~---------~~~~~l~~~-~~dg~i~~wd~~ 232 (708)
. .|..++.. ++.. ...+... ..+. ...-.....+++ .++|.|..+ ...+.|+.++.
T Consensus 294 ~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~- 372 (433)
T 4hw6_A 294 KHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP- 372 (433)
T ss_dssp TTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT-
T ss_pred CCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC-
Confidence 4 89998865 3322 1122111 0000 001234677898 677775544 45678999985
Q ss_pred CCeeEEEeecc------------------ccCeEEEEEe-CCCCEEEEEecCCeEEEEEcc
Q psy12614 233 TGVQWSDVKTH------------------KKDILALTVS-EDENYLYCAGVDPTVVCFQRT 274 (708)
Q Consensus 233 ~~~~~~~~~~~------------------~~~i~~~~~s-~~~~~l~~~~~dg~i~iw~~~ 274 (708)
+|... ++.+. -.....++++ ++++++++-..++.|+.++++
T Consensus 373 ~G~v~-t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 373 EGRVT-TYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp TSEEE-EEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred CCCEE-EEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence 56443 32221 1236789999 555544444456678877764
|
| >3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B | Back alignment and structure |
|---|
Probab=98.40 E-value=0.00016 Score=69.81 Aligned_cols=203 Identities=8% Similarity=-0.029 Sum_probs=130.6
Q ss_pred cEEEEEEcCCCCEEEEE-eCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CC-EEEEEcCCCcEEEEECCCCeE
Q psy12614 28 VINCIACEPKSSRLAVS-RADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--ND-RLFSGGLQGFVNEYDMRRLNI 103 (708)
Q Consensus 28 ~v~~~~~s~~~~~la~~-~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~-~l~s~~~d~~i~vwd~~~~~~ 103 (708)
.+.+++|++.+..|... ...+.|..+++..+......+...- .....+++. ++ .+++-...+.|.+++++....
T Consensus 36 ~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l--~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~ 113 (318)
T 3sov_A 36 DAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGL--LSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLR 113 (318)
T ss_dssp EEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECC--SCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSC
T ss_pred ccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCC--CCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcE
Confidence 46688999866555554 4567899999887642221333322 456677777 44 445556678999999876543
Q ss_pred eEEEeecCCceEEEEEecCCCEEEEEeC--CCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC--eEE
Q psy12614 104 KSSTAVTSGTCWCLSVHKKKRLLAAGTE--QGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA--AVR 179 (708)
Q Consensus 104 ~~~~~~~~~~v~~~~~s~~~~~la~~~~--d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d--~i~ 179 (708)
...+.........+++.|.+..|+.+.. .+.|...+....... ......-.....++++|++..|+.+... .|.
T Consensus 114 ~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~--~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~ 191 (318)
T 3sov_A 114 KVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRF--IIINSEIYWPNGLTLDYEEQKLYWADAKLNFIH 191 (318)
T ss_dssp EEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCE--EEECSSCSCEEEEEEETTTTEEEEEETTTTEEE
T ss_pred EEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeE--EEEECCCCCccEEEEeccCCEEEEEECCCCEEE
Confidence 3333344466789999997777666552 577888888755432 2222223456899999988888776654 899
Q ss_pred EEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEEEEcCCCcEEEEeCCCCeeEEEee
Q psy12614 180 VWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVK 241 (708)
Q Consensus 180 iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~ 241 (708)
.+|+.. .....+.... ......+++..++.+.+-...+.|..++..+|+....+.
T Consensus 192 ~~d~dG-~~~~~~~~~~------~~~P~glav~~~~lywtd~~~~~V~~~~~~~G~~~~~i~ 246 (318)
T 3sov_A 192 KSNLDG-TNRQAVVKGS------LPHPFALTLFEDILYWTDWSTHSILACNKYTGEGLREIH 246 (318)
T ss_dssp EEETTS-CSCEEEECSC------CSCEEEEEEETTEEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred EEcCCC-CceEEEecCC------CCCceEEEEeCCEEEEEecCCCeEEEEECCCCCceEEEe
Confidence 999863 3333333211 344567777644446666667889999987777655554
|
| >3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=98.40 E-value=0.00014 Score=72.65 Aligned_cols=205 Identities=9% Similarity=-0.052 Sum_probs=131.3
Q ss_pred CCcEEEEEEcCCCCEEEEE-eCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEE-EEEcCCCcEEEEECCCC
Q psy12614 26 PKVINCIACEPKSSRLAVS-RADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRL-FSGGLQGFVNEYDMRRL 101 (708)
Q Consensus 26 ~~~v~~~~~s~~~~~la~~-~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l-~s~~~d~~i~vwd~~~~ 101 (708)
...+..++|++.+..|... ...+.|..+++..+.... .+.... .....+++. ++.| ++-...+.|.+.+++..
T Consensus 115 ~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~-~~~~~~--~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~ 191 (386)
T 3v65_B 115 LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEE-VVSTGL--ESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGA 191 (386)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEE-EECSSC--SCCCCEEEETTTTEEEEEETTTTEEEECBTTSC
T ss_pred CCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEE-EEeCCC--CCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCC
Confidence 3457789999866666554 456789999988765433 333222 345667777 4444 55566788999988765
Q ss_pred eEeEEEeecCCceEEEEEecCCCEEEEEeC-C-CcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC--e
Q psy12614 102 NIKSSTAVTSGTCWCLSVHKKKRLLAAGTE-Q-GHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA--A 177 (708)
Q Consensus 102 ~~~~~~~~~~~~v~~~~~s~~~~~la~~~~-d-~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d--~ 177 (708)
.....+...-.....++++|.+..|..+.. . +.|..++....... ......-.....|+|+|++..|+.+... .
T Consensus 192 ~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~--~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~ 269 (386)
T 3v65_B 192 HRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRR--IIADTHLFWPNGLTIDYAGRRMYWVDAKHHV 269 (386)
T ss_dssp SCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCE--EEECSSCSCEEEEEEEGGGTEEEEEETTTTE
T ss_pred ceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcE--EEEECCCCCeeeEEEeCCCCEEEEEECCCCE
Confidence 443334334456889999998776666543 3 67888888765443 2222333457899999888877776554 8
Q ss_pred EEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEEEEcCCCcEEEEeCCCCeeEEEeec
Q psy12614 178 VRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVKT 242 (708)
Q Consensus 178 i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~ 242 (708)
|..+|+... ....+.... ......+++..+..+++-...+.|..++..+|+....+..
T Consensus 270 I~~~d~dG~-~~~~~~~~~------~~~P~giav~~~~ly~td~~~~~V~~~~~~~G~~~~~i~~ 327 (386)
T 3v65_B 270 IERANLDGS-HRKAVISQG------LPHPFAITVFEDSLYWTDWHTKSINSANKFTGKNQEIIRN 327 (386)
T ss_dssp EEEECTTSC-SCEEEECSS------CSSEEEEEEETTEEEEEETTTTEEEEEETTTCCSCEEEEC
T ss_pred EEEEeCCCC-eeEEEEECC------CCCceEEEEECCEEEEeeCCCCeEEEEECCCCcceEEEcc
Confidence 999997643 333332221 3346677774333355666678888888767766666543
|
| >2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major} | Back alignment and structure |
|---|
Probab=98.39 E-value=1.6e-05 Score=87.23 Aligned_cols=192 Identities=12% Similarity=0.116 Sum_probs=115.5
Q ss_pred cEEEEEEc-CCCCEEEEEeC-CC----cEEEEeCCCC-CeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCC-----CcE
Q psy12614 28 VINCIACE-PKSSRLAVSRA-DQ----SIEIWDISET-PHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQ-----GFV 93 (708)
Q Consensus 28 ~v~~~~~s-~~~~~la~~~~-dg----~v~iwd~~~~-~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d-----~~i 93 (708)
.+...+|| |||++||.+.. +| .|.++|+.++ +.+...+. .....++|+ ++.|+....+ ..|
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~-----~~~~~~~WspDg~~l~y~~~d~~~~~~~v 249 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS-----GTNGEIVWGPDHTSLFYVTKDETLRENKV 249 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE-----EECSCCEECSSTTEEEEEEECTTCCEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc-----CceeeEEEecCCCEEEEEEECCCCCCCEE
Confidence 68889999 99999997643 33 4999999998 63321111 123457898 6777766654 368
Q ss_pred EEEECCCCeE--eEEEe-ecCCceEEEEEecCCCEEEEEeC---CCcEEEEEccCCc--E--EEEEecccccccEEEEEE
Q psy12614 94 NEYDMRRLNI--KSSTA-VTSGTCWCLSVHKKKRLLAAGTE---QGHINLFQISDEG--L--LYEKLLDRQQGRILCTAW 163 (708)
Q Consensus 94 ~vwd~~~~~~--~~~~~-~~~~~v~~~~~s~~~~~la~~~~---d~~i~iwd~~~~~--~--~~~~~~~~~~~~v~~~~~ 163 (708)
.++++.++.. ...+. ........+.|||||++|+..+. ...|+++|+.++. . . .......+...++.|
T Consensus 250 ~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~--~l~~~~~~~~~s~~~ 327 (751)
T 2xe4_A 250 WRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLE--IVRPREKGVRYDVQM 327 (751)
T ss_dssp EEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEE--ESSCCCTTCCEEEEE
T ss_pred EEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeE--EeecCCCCceEEEee
Confidence 8889887642 22222 22345668899999999887653 4568889988752 2 2 333444455566665
Q ss_pred CCCCCEEEEecC----C-eEEEEEcCCCceEEE-EEecccCCCCCceeEEEEEEccCCEEEEEcCCCc--EEEEeC
Q psy12614 164 HSSGDYLVTGCA----A-AVRVWDIHKGHAIHK-MSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGF--VRFWDG 231 (708)
Q Consensus 164 s~d~~~l~~~~~----d-~i~iwd~~~~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~--i~~wd~ 231 (708)
+.++.+++.... . .|..+++.++..... +... .....+..+.+..+.-+++...+|. |.++++
T Consensus 328 ~~g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~-----~~~~~l~~~~~~~~~lv~~~~~~g~~~l~~~dl 398 (751)
T 2xe4_A 328 HGTSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDH-----SEDVFMESIAVRSNYLVVAGRRAGLTRIWTMMA 398 (751)
T ss_dssp ETTTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECC-----CSSEEEEEEEECSSEEEEEEEETTEEEEEEEEC
T ss_pred eeCCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECC-----CCCcEEEEEEEECCEEEEEEEeCCEEEEEEEec
Confidence 544444444332 3 788888765322222 2211 1133566666653323556666664 556675
|
| >3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=98.36 E-value=0.00032 Score=70.96 Aligned_cols=239 Identities=9% Similarity=0.065 Sum_probs=138.3
Q ss_pred cEEEEEEcC-CCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCC-C----cEEEEECC
Q psy12614 28 VINCIACEP-KSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQ-G----FVNEYDMR 99 (708)
Q Consensus 28 ~v~~~~~s~-~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d-~----~i~vwd~~ 99 (708)
....++++| ++..|.++...+.|..+|+.++... .+.... .....|+|+ +++|+++... + .+...+.
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~--~~~~~~--~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~- 212 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVS--TVYSGL--SKVRTICWTHEADSMIITNDQNNNDRPNNYILTR- 212 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEE--EEECCC--SCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG-
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEE--EEecCC--CCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC-
Confidence 457889998 4556666655578999999876643 333333 678999999 7766666542 2 2333443
Q ss_pred CCeEe--EEEeecCCceEEEEEec-CCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecC-
Q psy12614 100 RLNIK--SSTAVTSGTCWCLSVHK-KKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCA- 175 (708)
Q Consensus 100 ~~~~~--~~~~~~~~~v~~~~~s~-~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~- 175 (708)
.+... ..+. .......++++| ++.++++-..++.|..++..++.......... ......++|+|+|++|+.+..
T Consensus 213 ~g~~~~~~~l~-~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~-~~~P~gia~~pdG~~lyv~d~~ 290 (430)
T 3tc9_A 213 ESGFKVITELT-KGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQD-SGWEFHIQFHPSGNYAYIVVVN 290 (430)
T ss_dssp GGTSCSEEEEE-ECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSS-SSCCEEEEECTTSSEEEEEETT
T ss_pred CCceeeeeeec-cCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCC-CCcceeEEEcCCCCEEEEEECC
Confidence 33221 2222 234567889999 66666665567889999998776532122222 245678999999996665544
Q ss_pred C-eEEEEEcCC--Cce--EEEEEec--ccCC------CCCceeEE-EEEEc--------cCCEEEEE-cCCCcEEEEeCC
Q psy12614 176 A-AVRVWDIHK--GHA--IHKMSLD--KSSK------FSKNTAVW-CVAFC--------ADFTIITG-DSGGFVRFWDGK 232 (708)
Q Consensus 176 d-~i~iwd~~~--~~~--~~~~~~~--~~~~------~~~~~~v~-~~~~~--------~~~~l~~~-~~dg~i~~wd~~ 232 (708)
. .|..++... ++. +..+... ..+. ...-.... .++.. ++|.|..+ ...+.|+.++ .
T Consensus 291 ~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~-~ 369 (430)
T 3tc9_A 291 QHYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILT-P 369 (430)
T ss_dssp TTEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEEC-T
T ss_pred CCEEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCcEEEEEC-C
Confidence 4 899987653 221 1222211 0000 00011123 45553 34665544 4467888888 4
Q ss_pred CCeeEEEeec----c-------------ccCeEEEEEeCCCCEEEEE-ecCCeEEEEEcc
Q psy12614 233 TGVQWSDVKT----H-------------KKDILALTVSEDENYLYCA-GVDPTVVCFQRT 274 (708)
Q Consensus 233 ~~~~~~~~~~----~-------------~~~i~~~~~s~~~~~l~~~-~~dg~i~iw~~~ 274 (708)
+|........ . -.....++++|++..|+++ ..++.|+.++++
T Consensus 370 ~G~v~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 429 (430)
T 3tc9_A 370 QGRVTTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKIGYE 429 (430)
T ss_dssp TSEEEEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred CCcEEEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEccC
Confidence 5654333211 0 1246889999954445444 445678877654
|
| >1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A | Back alignment and structure |
|---|
Probab=98.34 E-value=4e-05 Score=82.77 Aligned_cols=260 Identities=11% Similarity=0.025 Sum_probs=146.3
Q ss_pred CCEEEEEcCCC-----------cEEEEECCCCeEe--EEEe-ecCCceEEEEEecCCCEEEEEeC-CCcEEEEEccCCcE
Q psy12614 81 NDRLFSGGLQG-----------FVNEYDMRRLNIK--SSTA-VTSGTCWCLSVHKKKRLLAAGTE-QGHINLFQISDEGL 145 (708)
Q Consensus 81 ~~~l~s~~~d~-----------~i~vwd~~~~~~~--~~~~-~~~~~v~~~~~s~~~~~la~~~~-d~~i~iwd~~~~~~ 145 (708)
++.++.|+.+. .+.+||..+++-. ..+. .+.....++++..+++.+++|+. +..+.+||..+++.
T Consensus 198 g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W 277 (656)
T 1k3i_A 198 GRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSLYDSSSDSW 277 (656)
T ss_dssp TEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEEEEGGGTEE
T ss_pred CEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEEecCcCCce
Confidence 55666666432 5889999887632 2222 23334456788899999999884 56899999998877
Q ss_pred EEEEecccccccEEEEEECCCCCEEEEecC-------CeEEEEEcCCCceEEEEEecc-cCCCCCceeEEEEEEccCCE-
Q psy12614 146 LYEKLLDRQQGRILCTAWHSSGDYLVTGCA-------AAVRVWDIHKGHAIHKMSLDK-SSKFSKNTAVWCVAFCADFT- 216 (708)
Q Consensus 146 ~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~-------d~i~iwd~~~~~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~- 216 (708)
.....+.. ...-.+++..++++.++.|+. +.+.+||..+++-.. +.... ... ..... ...+..+++
T Consensus 278 ~~~~~~~~-~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~-~~~~~~~p~-~~~~~--~~~~~~~~~i 352 (656)
T 1k3i_A 278 IPGPDMQV-ARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTS-LPNAKVNPM-LTADK--QGLYRSDNHA 352 (656)
T ss_dssp EECCCCSS-CCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEE-ETTSCSGGG-CCCCT--TGGGTTTCSC
T ss_pred eECCCCCc-cccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCccee-CCCcccccc-ccccc--cceeecCCce
Confidence 53222221 112235566689999998883 258999998765332 21000 000 00000 011122333
Q ss_pred EEEEcCC---------CcEEEEeCCCCeeEEEeecccc---------CeEEEEEeC-CCCEEEEEecCC-----------
Q psy12614 217 IITGDSG---------GFVRFWDGKTGVQWSDVKTHKK---------DILALTVSE-DENYLYCAGVDP----------- 266 (708)
Q Consensus 217 l~~~~~d---------g~i~~wd~~~~~~~~~~~~~~~---------~i~~~~~s~-~~~~l~~~~~dg----------- 266 (708)
++.++.+ ..+..||..+.........+.. .-.++.|.. +++.++.|+.++
T Consensus 353 yv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~ 432 (656)
T 1k3i_A 353 WLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAH 432 (656)
T ss_dssp CEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEE
T ss_pred EEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcce
Confidence 3444433 4577888877654433322211 224444543 677777777542
Q ss_pred eEEEEEccCCcccccCCCCCCCCcceEEeE--EEeccccceEEEEE-eCCEEEEEcCC-----------CeEEEEeCCCC
Q psy12614 267 TVVCFQRTRKPQVCSTSGPEQGSSVWVRSV--NRVIHEGDVKSLAL-HGNRLYSGGLD-----------SYLSLSYYPPK 332 (708)
Q Consensus 267 ~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~~~~v~~l~~-~~~~l~s~~~d-----------~~i~iw~~~~~ 332 (708)
.+.+||..+ . .|.... .+........++.. .+..++.||.+ ..+.+||..+.
T Consensus 433 ~v~~yd~~~--------~------~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~ 498 (656)
T 1k3i_A 433 IITLGEPGT--------S------PNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQD 498 (656)
T ss_dssp EEECCSTTS--------C------CEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGT
T ss_pred EEEcCCCCC--------C------CeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCC
Confidence 567777666 2 354332 22211122233444 37888888864 46889999887
Q ss_pred ceeecCccCCC----CceEEEEcCCcEEEEEc
Q psy12614 333 TLVKYPCTLAQ----STPVSLAKDIQHVLLQY 360 (708)
Q Consensus 333 ~~~~~~~~~~~----~~~~~~s~~~~~l~~~~ 360 (708)
....+. +... .....+.+++++++.+.
T Consensus 499 ~W~~~~-~~~~~R~~hs~a~ll~dg~v~v~GG 529 (656)
T 1k3i_A 499 TFYKQN-PNSIVRVYHSISLLLPDGRVFNGGG 529 (656)
T ss_dssp EEEECC-CCSSCCCTTEEEEECTTSCEEEEEC
T ss_pred ceeecC-CCCCccccccHhhcCCCcEEEecCC
Confidence 765554 2221 12345668999999874
|
| >2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus} | Back alignment and structure |
|---|
Probab=98.32 E-value=0.00073 Score=65.61 Aligned_cols=234 Identities=8% Similarity=0.043 Sum_probs=132.3
Q ss_pred CCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEe--cCCCCCcEEEEEEe-CCEEEEEcCCCcEEEEECCCCe
Q psy12614 26 PKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFI--GDPLSNSIECLTWF-NDRLFSGGLQGFVNEYDMRRLN 102 (708)
Q Consensus 26 ~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~--~h~~~~~v~~l~~~-~~~l~s~~~d~~i~vwd~~~~~ 102 (708)
...+.+++|+| +..+++ +..|.|.. ..+.++.-..... .+. ..+..+.+. ...++.++.+|.|.. ..+.|+
T Consensus 79 ~~~~~~i~~~~-~~~~~~-g~~g~i~~-S~DgG~tW~~~~~~~~~~--~~~~~i~~~~~~~~~~~~~~g~v~~-S~DgG~ 152 (327)
T 2xbg_A 79 DYRFNSVSFQG-NEGWIV-GEPPIMLH-TTDGGQSWSQIPLDPKLP--GSPRLIKALGNGSAEMITNVGAIYR-TKDSGK 152 (327)
T ss_dssp CCEEEEEEEET-TEEEEE-EETTEEEE-ESSTTSSCEECCCCTTCS--SCEEEEEEEETTEEEEEETTCCEEE-ESSTTS
T ss_pred CccEEEEEecC-CeEEEE-ECCCeEEE-ECCCCCCceECccccCCC--CCeEEEEEECCCCEEEEeCCccEEE-EcCCCC
Confidence 34688999987 444454 45564443 3333332221111 223 567888877 555555555665432 222333
Q ss_pred EeEE-EeecCCceEEEEEecCCCEEEEEeCCCcEEE-EEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCCeEEE
Q psy12614 103 IKSS-TAVTSGTCWCLSVHKKKRLLAAGTEQGHINL-FQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAAAVRV 180 (708)
Q Consensus 103 ~~~~-~~~~~~~v~~~~~s~~~~~la~~~~d~~i~i-wd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~i~i 180 (708)
.-.. .......+.++++.+++.+++++. +|.+.. +|-...... ..-......+..+.+.+++..++.+....+.+
T Consensus 153 tW~~~~~~~~~~~~~~~~~~~~~~~~~g~-~G~~~~S~d~gG~tW~--~~~~~~~~~~~~~~~~~~g~~~~~~~~G~~~~ 229 (327)
T 2xbg_A 153 NWQALVQEAIGVMRNLNRSPSGEYVAVSS-RGSFYSTWEPGQTAWE--PHNRTTSRRLHNMGFTPDGRLWMIVNGGKIAF 229 (327)
T ss_dssp SEEEEECSCCCCEEEEEECTTSCEEEEET-TSSEEEEECTTCSSCE--EEECCSSSCEEEEEECTTSCEEEEETTTEEEE
T ss_pred CCEEeecCCCcceEEEEEcCCCcEEEEEC-CCcEEEEeCCCCCcee--ECCCCCCCccceeEECCCCCEEEEeCCceEEE
Confidence 2222 234456789999999988877654 454443 332122222 11223456788999999998766554447666
Q ss_pred EEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEEEEcCCCcEEEEeCCCCeeEEEeec---cccCeEEEEEeCCCC
Q psy12614 181 WDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVKT---HKKDILALTVSEDEN 257 (708)
Q Consensus 181 wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~---~~~~i~~~~~s~~~~ 257 (708)
.+...|+....+..+.. .....+.++++.+++++++++.+|.| ++..+.|+.-..+.. ....+.++.|.+++
T Consensus 230 s~~D~G~tW~~~~~~~~---~~~~~~~~v~~~~~~~~~~~g~~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~- 304 (327)
T 2xbg_A 230 SDPDNSENWGELLSPLR---RNSVGFLDLAYRTPNEVWLAGGAGAL-LCSQDGGQTWQQDVDVKKVPSNFYKILFFSPD- 304 (327)
T ss_dssp EETTEEEEECCCBCTTS---SCCSCEEEEEESSSSCEEEEESTTCE-EEESSTTSSCEECGGGTTSSSCCCEEEEEETT-
T ss_pred ecCCCCCeeEeccCCcc---cCCcceEEEEecCCCEEEEEeCCCeE-EEeCCCCcccEEcCccCCCCCCeEEEEEECCC-
Confidence 64222443333322100 01245889999988886666667877 444455654444432 24567889887555
Q ss_pred EEEEEecCCeEEEEEc
Q psy12614 258 YLYCAGVDPTVVCFQR 273 (708)
Q Consensus 258 ~l~~~~~dg~i~iw~~ 273 (708)
.+++++.+|.|..++-
T Consensus 305 ~~~~~G~~G~i~~~~~ 320 (327)
T 2xbg_A 305 QGFILGQKGILLRYVT 320 (327)
T ss_dssp EEEEECSTTEEEEECC
T ss_pred ceEEEcCCceEEEEcC
Confidence 5667778898777654
|
| >1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 | Back alignment and structure |
|---|
Probab=98.32 E-value=0.0028 Score=61.17 Aligned_cols=217 Identities=10% Similarity=-0.032 Sum_probs=133.2
Q ss_pred CcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEe-CCCcEEEEEccC----CcEEEEEecccccccEEEEEECC
Q psy12614 91 GFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGT-EQGHINLFQISD----EGLLYEKLLDRQQGRILCTAWHS 165 (708)
Q Consensus 91 ~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~-~d~~i~iwd~~~----~~~~~~~~~~~~~~~v~~~~~s~ 165 (708)
..|+..|+.+.+....+. ....+.+++|++++..|..+. ..+.|..++..+ .... ..+...-.....+++.+
T Consensus 10 ~~I~~i~~~~~~~~~~~~-~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~--~~~~~~~~~p~glavd~ 86 (316)
T 1ijq_A 10 HEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYD--TVISRDIQAPDGLAVDW 86 (316)
T ss_dssp SSEEEEETTSCCCEEEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CE--EEECSSCSCCCEEEEET
T ss_pred CeEEEEECCCcceEehhc-CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccE--EEEeCCCCCcCEEEEee
Confidence 568889998876554443 345678999999776666554 468899999876 2222 22222223457888887
Q ss_pred CCCEEEEe-cCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccC-CEEEEEcC-C-CcEEEEeCCCCeeEEEe
Q psy12614 166 SGDYLVTG-CAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCAD-FTIITGDS-G-GFVRFWDGKTGVQWSDV 240 (708)
Q Consensus 166 d~~~l~~~-~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l~~~~~-d-g~i~~wd~~~~~~~~~~ 240 (708)
.+..|+.+ ... .|.+.++.... ...+.... ......+++.|. +.++.+.. . +.|...++. |+....+
T Consensus 87 ~~~~ly~~d~~~~~I~~~~~~g~~-~~~~~~~~------~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~d-G~~~~~~ 158 (316)
T 1ijq_A 87 IHSNIYWTDSVLGTVSVADTKGVK-RKTLFREN------GSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN-GVDIYSL 158 (316)
T ss_dssp TTTEEEEEETTTTEEEEEETTSSS-EEEEEECT------TCCEEEEEEETTTTEEEEEECSSSCEEEEEETT-SCCEEEE
T ss_pred cCCeEEEEECCCCEEEEEeCCCCc-eEEEEECC------CCCcceEEeCCCCCEEEEEccCCCCeEEEEcCC-CCCeEEE
Confidence 66556544 445 99999986433 33332211 356789999984 56554443 3 688888875 4433333
Q ss_pred -eccccCeEEEEEeCCCCEEEEEec-CCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe-CCEEEE
Q psy12614 241 -KTHKKDILALTVSEDENYLYCAGV-DPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH-GNRLYS 317 (708)
Q Consensus 241 -~~~~~~i~~~~~s~~~~~l~~~~~-dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~-~~~l~s 317 (708)
...-.....+++++++..|+.+.. .+.|..+++.. .. .+ .............++++. +..+++
T Consensus 159 ~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg--------~~----~~--~~~~~~~~~~~P~giav~~~~ly~~ 224 (316)
T 1ijq_A 159 VTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG--------GN----RK--TILEDEKRLAHPFSLAVFEDKVFWT 224 (316)
T ss_dssp ECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS--------CS----CE--EEEECTTTTSSEEEEEEETTEEEEE
T ss_pred EECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCC--------Cc----eE--EEeecCCccCCcEEEEEECCEEEEE
Confidence 223356789999998888877664 56899999875 22 00 111111122345677777 556666
Q ss_pred EcCCCeEEEEeCCCC
Q psy12614 318 GGLDSYLSLSYYPPK 332 (708)
Q Consensus 318 ~~~d~~i~iw~~~~~ 332 (708)
-...+.|..++..++
T Consensus 225 d~~~~~V~~~~~~~g 239 (316)
T 1ijq_A 225 DIINEAIFSANRLTG 239 (316)
T ss_dssp ETTTTEEEEEETTTC
T ss_pred ECCCCeEEEEeCCCC
Confidence 666778888886543
|
| >4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=98.29 E-value=0.00027 Score=71.47 Aligned_cols=234 Identities=8% Similarity=0.027 Sum_probs=137.8
Q ss_pred ceEEEEEecC--CCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecC----C-eEEEEEcCC
Q psy12614 113 TCWCLSVHKK--KRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCA----A-AVRVWDIHK 185 (708)
Q Consensus 113 ~v~~~~~s~~--~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~----d-~i~iwd~~~ 185 (708)
....++++|+ +..|.++...+.|+.+|..++... .+.........++|+++|+++++... . .+...+...
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~---~~~~~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~ 216 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVD---IKTTNIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRAS 216 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEE---EECCCCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGG
T ss_pred CCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEE---EeecCCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCC
Confidence 4668999995 445555554488999999888774 33334556899999999994444431 2 344444332
Q ss_pred CceE-EEEEecccCCCCCceeEEEEEEcc-CCEEEEEc-CCCcEEEEeCCCCeeEEEe-ec-cccCeEEEEEeCCCCEEE
Q psy12614 186 GHAI-HKMSLDKSSKFSKNTAVWCVAFCA-DFTIITGD-SGGFVRFWDGKTGVQWSDV-KT-HKKDILALTVSEDENYLY 260 (708)
Q Consensus 186 ~~~~-~~~~~~~~~~~~~~~~v~~~~~~~-~~~l~~~~-~dg~i~~wd~~~~~~~~~~-~~-~~~~i~~~~~s~~~~~l~ 260 (708)
+... ..+.. ......+++.| +|.+..+. .++.|+.+|..++.....+ .. ....-..++++|++++|+
T Consensus 217 ~~~~~~~~~~--------~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LY 288 (433)
T 4hw6_A 217 GFTERLSLCN--------ARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAY 288 (433)
T ss_dssp TTCCEEEEEE--------CSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEE
T ss_pred Ceeccccccc--------cCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEE
Confidence 2211 11111 23345688899 67766554 5678999998877653332 11 122234699999999666
Q ss_pred EEec-CCeEEEEEccCCcccccCCCCCCCCcceEEeEEEec---------------cccceEEEEE---------e--CC
Q psy12614 261 CAGV-DPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVI---------------HEGDVKSLAL---------H--GN 313 (708)
Q Consensus 261 ~~~~-dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~---------------~~~~v~~l~~---------~--~~ 313 (708)
.+.. .+.|+.++..... +. +.....+.+ .-.....+++ . +.
T Consensus 289 vad~~~~~I~~~~~d~~~------~~------~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~ 356 (433)
T 4hw6_A 289 IIYNGKHCIYRVDYNRET------GK------LAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYD 356 (433)
T ss_dssp EEETTTTEEEEEEBCTTT------CC------BCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEE
T ss_pred EEeCCCCEEEEEeCCCCC------cc------cCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCc
Confidence 6654 5789998876300 10 000001111 1123566887 5 55
Q ss_pred EEEEEcCCCeEEEEeCCCCceeecCc------------------cCCCCceEEEE-cCCcEEEEE-cCCeEEEEEec
Q psy12614 314 RLYSGGLDSYLSLSYYPPKTLVKYPC------------------TLAQSTPVSLA-KDIQHVLLQ-YTSHLELWSLG 370 (708)
Q Consensus 314 ~l~s~~~d~~i~iw~~~~~~~~~~~~------------------~~~~~~~~~~s-~~~~~l~~~-~~~~i~i~~~~ 370 (708)
++++-...+.|+.++... .+..+.+ .+..+..++++ ++|.++++- .++.|+.++++
T Consensus 357 lyvaD~~n~~I~~~~~~G-~v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 357 FYFCDRDSHTVRVLTPEG-RVTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp EEEEETTTTEEEEECTTS-EEEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred EEEEECCCCEEEEECCCC-CEEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence 666666677888888543 3322221 12345678999 677777764 56778777654
|
| >3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L | Back alignment and structure |
|---|
Probab=98.25 E-value=0.0022 Score=64.13 Aligned_cols=222 Identities=7% Similarity=0.013 Sum_probs=137.6
Q ss_pred CEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEE-cCCCcEEEEECCCC----eEeEEEeecC
Q psy12614 39 SRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSG-GLQGFVNEYDMRRL----NIKSSTAVTS 111 (708)
Q Consensus 39 ~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~-~~d~~i~vwd~~~~----~~~~~~~~~~ 111 (708)
.+|+.+. ...|+..++....... .+. .. ..+.+|+|. ++.|+.+ ...+.|..+++... .....+....
T Consensus 84 ~~ll~~~-~~~I~~i~l~~~~~~~-~~~-~~--~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~ 158 (400)
T 3p5b_L 84 AYLFFTN-RHEVRKMTLDRSEYTS-LIP-NL--RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDI 158 (400)
T ss_dssp CEEEEEE-TTEEEEECTTSCSCEE-EEC-SC--SCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSC
T ss_pred ceeEEec-cceeEEEccCCcceeE-ecc-cc--CcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCC
Confidence 3555554 3589999998766543 333 33 678999999 5666555 46788999998763 2233333344
Q ss_pred CceEEEEEecCCCEEEE-EeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEec--CC-eEEEEEcCCCc
Q psy12614 112 GTCWCLSVHKKKRLLAA-GTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGC--AA-AVRVWDIHKGH 187 (708)
Q Consensus 112 ~~v~~~~~s~~~~~la~-~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~--~d-~i~iwd~~~~~ 187 (708)
.....+++.+.+..|+. -...+.|.+.++++.... ..+.........+++.|.+.+|+... .. .|...++.. .
T Consensus 159 ~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~--~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG-~ 235 (400)
T 3p5b_L 159 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRK--TLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG-V 235 (400)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEE--EEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTS-C
T ss_pred CCcccEEEEecCCceEEEECCCCeEEEEeCCCCceE--EEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCC-C
Confidence 56789999985555544 445788999998876553 23333344578999999776666554 23 788888754 3
Q ss_pred eEEEEEecccCCCCCceeEEEEEEccCC-EEEEE-cCCCcEEEEeCCCCeeEEEeec--cccCeEEEEEeCCCCEEEEEe
Q psy12614 188 AIHKMSLDKSSKFSKNTAVWCVAFCADF-TIITG-DSGGFVRFWDGKTGVQWSDVKT--HKKDILALTVSEDENYLYCAG 263 (708)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~~~-~~dg~i~~wd~~~~~~~~~~~~--~~~~i~~~~~s~~~~~l~~~~ 263 (708)
....+... .-.....+++++++ +|..+ ...+.|..+|+........... .-.....+++.. +..+++-.
T Consensus 236 ~~~~~~~~------~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~~-~~lywtd~ 308 (400)
T 3p5b_L 236 DIYSLVTE------NIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFE-DKVFWTDI 308 (400)
T ss_dssp SCEEEECS------SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEET-TEEEEEES
T ss_pred ccEEEEEC------CCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEeC-CEEEEecC
Confidence 33333221 13567899999765 55544 4567899999864433222221 223455777733 33444555
Q ss_pred cCCeEEEEEccC
Q psy12614 264 VDPTVVCFQRTR 275 (708)
Q Consensus 264 ~dg~i~iw~~~~ 275 (708)
..+.|..++..+
T Consensus 309 ~~~~V~~~~~~~ 320 (400)
T 3p5b_L 309 INEAIFSANRLT 320 (400)
T ss_dssp SSCSEEEEESSS
T ss_pred CCCeEEEEEcCC
Confidence 567888888766
|
| >2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major} | Back alignment and structure |
|---|
Probab=98.23 E-value=0.00014 Score=79.78 Aligned_cols=190 Identities=14% Similarity=0.066 Sum_probs=109.0
Q ss_pred ceEEEEEe-cCCCEEEEEeC-CC----cEEEEEccCC-cEEEEEecccccccEEEEEECCCCCEEEEecCC------eEE
Q psy12614 113 TCWCLSVH-KKKRLLAAGTE-QG----HINLFQISDE-GLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA------AVR 179 (708)
Q Consensus 113 ~v~~~~~s-~~~~~la~~~~-d~----~i~iwd~~~~-~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d------~i~ 179 (708)
.+...+|| |||++||.+.. +| .|+++|+.++ +.+. ..+ ......++|+|||+.|+....+ .|.
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~-~~~---~~~~~~~~WspDg~~l~y~~~d~~~~~~~v~ 250 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIA-DKV---SGTNGEIVWGPDHTSLFYVTKDETLRENKVW 250 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCC-CCE---EEECSCCEECSSTTEEEEEEECTTCCEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCC-ccc---cCceeeEEEecCCCEEEEEEECCCCCCCEEE
Confidence 67889999 99999987644 22 4999999998 6321 111 1223468899999988876542 578
Q ss_pred EEEcCCCceE--EEEEecccCCCCCceeEEEEEEccCCE-EEEEc---CCCcEEEEeCCCC--ee--EEEeeccccCeEE
Q psy12614 180 VWDIHKGHAI--HKMSLDKSSKFSKNTAVWCVAFCADFT-IITGD---SGGFVRFWDGKTG--VQ--WSDVKTHKKDILA 249 (708)
Q Consensus 180 iwd~~~~~~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~---~dg~i~~wd~~~~--~~--~~~~~~~~~~i~~ 249 (708)
++++.++... ..+... .......+.|+|||+ |+... ....|+++|+.++ +. .............
T Consensus 251 ~~~lgt~~~~~~lv~~~~------~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s 324 (751)
T 2xe4_A 251 RHVMGKLQSEDVCLYEEH------NPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYD 324 (751)
T ss_dssp EEETTSCGGGCEEEEECC------CTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEE
T ss_pred EEECCCCchhcEEEEecC------CCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEE
Confidence 8888776422 222211 123456889999996 44332 2446888998875 23 2223333344455
Q ss_pred EEEeCCCCEEE-EEecC--C--eEEEEEccCCcccccCCCCCCCCcceEEeEE-Eecccc--ceEEEEEe-CCEEEEEcC
Q psy12614 250 LTVSEDENYLY-CAGVD--P--TVVCFQRTRKPQVCSTSGPEQGSSVWVRSVN-RVIHEG--DVKSLALH-GNRLYSGGL 320 (708)
Q Consensus 250 ~~~s~~~~~l~-~~~~d--g--~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~--~v~~l~~~-~~~l~s~~~ 320 (708)
+.|.. +..|+ ....+ + .|..+++.+ +. .| .. +..+.. .+..+.+. +.++++...
T Consensus 325 ~~~~~-g~~l~~~t~~~~a~~~~L~~~d~~~--------~~-----~~---~~~li~~~~~~~l~~~~~~~~~lv~~~~~ 387 (751)
T 2xe4_A 325 VQMHG-TSHLVILTNEGGAVNHKLLIAPRGQ--------PS-----DW---SHVLVDHSEDVFMESIAVRSNYLVVAGRR 387 (751)
T ss_dssp EEEET-TTEEEEEECTTTCTTCEEEEEETTS--------TT-----CC---CCEEECCCSSEEEEEEEECSSEEEEEEEE
T ss_pred Eeeee-CCEEEEEeCCCCCCCcEEEEEcCCC--------cc-----cc---eeeEECCCCCcEEEEEEEECCEEEEEEEe
Confidence 55444 55554 44433 2 566666553 11 11 11 222222 34556666 445566666
Q ss_pred CCeEE--EEeC
Q psy12614 321 DSYLS--LSYY 329 (708)
Q Consensus 321 d~~i~--iw~~ 329 (708)
++..+ ++++
T Consensus 388 ~g~~~l~~~dl 398 (751)
T 2xe4_A 388 AGLTRIWTMMA 398 (751)
T ss_dssp TTEEEEEEEEC
T ss_pred CCEEEEEEEec
Confidence 77544 4554
|
| >3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B | Back alignment and structure |
|---|
Probab=98.21 E-value=0.0014 Score=63.03 Aligned_cols=222 Identities=9% Similarity=0.021 Sum_probs=136.8
Q ss_pred EEEEEeCCCcEEEEeCCCCC-eEEEEEecCCCCCcEEEEEEe--CCEEE-EEcCCCcEEEEECCCCeEe-EEEeecCCce
Q psy12614 40 RLAVSRADQSIEIWDISETP-HVDRVFIGDPLSNSIECLTWF--NDRLF-SGGLQGFVNEYDMRRLNIK-SSTAVTSGTC 114 (708)
Q Consensus 40 ~la~~~~dg~v~iwd~~~~~-~~~~~~~~h~~~~~v~~l~~~--~~~l~-s~~~d~~i~vwd~~~~~~~-~~~~~~~~~v 114 (708)
+|+.+. ...|+..++.... .....+.+ . ..+.+++|. ++.|+ +-...+.|..+++..+... ..+...-...
T Consensus 6 ~ll~~~-~~~I~~i~l~~~~~~~~~~~~~-~--~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p 81 (318)
T 3sov_A 6 LLLYAN-RRDLRLVDATNGKENATIVVGG-L--EDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSP 81 (318)
T ss_dssp EEEEEC-EEEEEEEETTCTTSCCEEEEEE-E--EEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCC
T ss_pred EEEEEc-cCeEEEEECCCCceEEEEEecC-C--CccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCc
Confidence 444443 4579999998763 22213332 2 457789998 45554 5456788999998876422 2223333457
Q ss_pred EEEEEecCCCEEE-EEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEec--CC-eEEEEEcCCCceEE
Q psy12614 115 WCLSVHKKKRLLA-AGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGC--AA-AVRVWDIHKGHAIH 190 (708)
Q Consensus 115 ~~~~~s~~~~~la-~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~--~d-~i~iwd~~~~~~~~ 190 (708)
..+++.+.+..|. +-...+.|.+++....... ..+.........+++.|.+..|+.+. .. .|...++. |....
T Consensus 82 ~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~--~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~d-G~~~~ 158 (318)
T 3sov_A 82 DGLACDWLGEKLYWTDSETNRIEVSNLDGSLRK--VLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMD-GSSRF 158 (318)
T ss_dssp CEEEEETTTTEEEEEETTTTEEEEEETTSCSCE--EEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETT-SCSCE
T ss_pred cEEEEEcCCCeEEEEECCCCEEEEEECCCCcEE--EEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcC-CCCeE
Confidence 7899998655554 4445678999998865543 22323345678999998766666554 24 78888875 43333
Q ss_pred EEEecccCCCCCceeEEEEEEccCC-EEEEE-cCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEecCCeE
Q psy12614 191 KMSLDKSSKFSKNTAVWCVAFCADF-TIITG-DSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTV 268 (708)
Q Consensus 191 ~~~~~~~~~~~~~~~v~~~~~~~~~-~l~~~-~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i 268 (708)
.+... .-.....+++++++ ++..+ ...+.|..+|+..........+.......+++..+ ..+++-...+.|
T Consensus 159 ~~~~~------~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~~~-~lywtd~~~~~V 231 (318)
T 3sov_A 159 IIINS------EIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFED-ILYWTDWSTHSI 231 (318)
T ss_dssp EEECS------SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSCCSCEEEEEEETT-EEEEEETTTTEE
T ss_pred EEEEC------CCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecCCCCCceEEEEeCC-EEEEEecCCCeE
Confidence 33221 13557899999855 65544 45688999998643322222323445667777543 344454556788
Q ss_pred EEEEccC
Q psy12614 269 VCFQRTR 275 (708)
Q Consensus 269 ~iw~~~~ 275 (708)
..++..+
T Consensus 232 ~~~~~~~ 238 (318)
T 3sov_A 232 LACNKYT 238 (318)
T ss_dssp EEEETTT
T ss_pred EEEECCC
Confidence 8888876
|
| >3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.14 E-value=0.0021 Score=69.86 Aligned_cols=207 Identities=12% Similarity=0.046 Sum_probs=129.4
Q ss_pred CCcEEEEEEcCCCCEEEEE-eCCCcEEEEeCCCCC---eEEEEEecCCCCCcEEEEEEe--CCEE-EEEcCCCcEEEEEC
Q psy12614 26 PKVINCIACEPKSSRLAVS-RADQSIEIWDISETP---HVDRVFIGDPLSNSIECLTWF--NDRL-FSGGLQGFVNEYDM 98 (708)
Q Consensus 26 ~~~v~~~~~s~~~~~la~~-~~dg~v~iwd~~~~~---~~~~~~~~h~~~~~v~~l~~~--~~~l-~s~~~d~~i~vwd~ 98 (708)
...+..++|++....|... ...+.|..+++.... .....+.... .....|++. ++.| ++-...+.|.+.++
T Consensus 423 ~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l--~~P~GLAvD~~~~~LY~tD~~~~~I~v~~l 500 (791)
T 3m0c_C 423 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDI--QAPDGLAVDWIHSNIYWTDSVLGTVSVADT 500 (791)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSC--SCCCEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred CCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCC--CCcceeeeeecCCcEEEEecCCCeEEEEeC
Confidence 4567789999866655554 446778888887531 1222343333 556778887 5444 45567889999999
Q ss_pred CCCeEeEEEeecCCceEEEEEecCCCEEEEEeC--CCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC
Q psy12614 99 RRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTE--QGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA 176 (708)
Q Consensus 99 ~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~--d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d 176 (708)
........+.........|++.|.+.+|+.+.. .+.|...++...... ..+...-.....|++.+.+..|+.+...
T Consensus 501 dG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~--~lv~~~l~~P~GLavD~~~~~LYwaD~~ 578 (791)
T 3m0c_C 501 KGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIY--SLVTENIQWPNGITLDLLSGRLYWVDSK 578 (791)
T ss_dssp TSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEE--EEECSSCSCEEEEEEETTTTEEEEEETT
T ss_pred CCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceE--EEEeCCCCCceEEEEecCCCeEEEEeCC
Confidence 876544444444566899999998777766543 367888888766553 2333334578899999888888777654
Q ss_pred --eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEEEEcCCCcEEEEeCCCCeeEEEee
Q psy12614 177 --AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVK 241 (708)
Q Consensus 177 --~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~ 241 (708)
.|...++... ....+.... ........|++..+..+++-...+.|...|..+|+.+..+.
T Consensus 579 ~~~I~~~d~dG~-~~~~v~~~~----~~l~~P~glav~~~~lYwtD~~~~~I~~~dk~tG~~~~~l~ 640 (791)
T 3m0c_C 579 LHSISSIDVNGG-NRKTILEDE----KRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLA 640 (791)
T ss_dssp TTEEEEEETTSC-SCEEEEECT----TTTSSEEEEEEETTEEEEEETTTTEEEEEETTTCCCCEEEE
T ss_pred CCcEEEEecCCC-ceEEEecCC----CccCCCCEEEEeCCEEEEEECCCCEEEEEeCCCCcceEEee
Confidence 8999998544 333333221 11233456666443224455556778888877776555543
|
| >3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=98.09 E-value=0.0041 Score=62.86 Aligned_cols=243 Identities=13% Similarity=0.091 Sum_probs=139.2
Q ss_pred cEEEEEEcC-CCCEEEEE-eCCCcEEEEeCCCCCeEEEEEecCC-CCCcEEEEEE-------e--CCEEEEEcCCC----
Q psy12614 28 VINCIACEP-KSSRLAVS-RADQSIEIWDISETPHVDRVFIGDP-LSNSIECLTW-------F--NDRLFSGGLQG---- 91 (708)
Q Consensus 28 ~v~~~~~s~-~~~~la~~-~~dg~v~iwd~~~~~~~~~~~~~h~-~~~~v~~l~~-------~--~~~l~s~~~d~---- 91 (708)
....|+|+| ++..|.++ ...+.|++.|..++.... .+.... .......|+| + ++.|+++...+
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~-l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~ 218 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSS-PLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGD 218 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEE-EECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEE-EEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcc
Confidence 467899999 34445444 445678899988876643 333211 0136899999 7 77677766544
Q ss_pred ---cEEEEECCC-CeEe-----EEEeecCCceEEEEEecCCCE-EEEEeCCCcEEEEEcc-------CCcE---------
Q psy12614 92 ---FVNEYDMRR-LNIK-----SSTAVTSGTCWCLSVHKKKRL-LAAGTEQGHINLFQIS-------DEGL--------- 145 (708)
Q Consensus 92 ---~i~vwd~~~-~~~~-----~~~~~~~~~v~~~~~s~~~~~-la~~~~d~~i~iwd~~-------~~~~--------- 145 (708)
.|.+.+... +... ..+... .....++++|++.. +++-..++.|..+|+. ++..
T Consensus 219 ~~~~V~~i~r~~~G~~~~~~~~~~v~~~-~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~ 297 (496)
T 3kya_A 219 ESPSVYIIKRNADGTFDDRSDIQLIAAY-KQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNP 297 (496)
T ss_dssp GEEEEEEEECCTTSCCSTTSCEEEEEEE-SCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCT
T ss_pred cCceEEEEecCCCCceeecccceeeccC-CCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccc
Confidence 266665444 2221 222222 34567899995554 4455567889999997 5553
Q ss_pred --E-EEEecccccccEEEEEECCCCCEEEEecC-C-eEEEEEcC--CCceE--EEEEec--ccCCC------CCceeEE-
Q psy12614 146 --L-YEKLLDRQQGRILCTAWHSSGDYLVTGCA-A-AVRVWDIH--KGHAI--HKMSLD--KSSKF------SKNTAVW- 207 (708)
Q Consensus 146 --~-~~~~~~~~~~~v~~~~~s~d~~~l~~~~~-d-~i~iwd~~--~~~~~--~~~~~~--~~~~~------~~~~~v~- 207 (708)
. ..... +.......++|+|+|++|+.+.. . .|+.++.. .+... ..+... ..+.- ..-....
T Consensus 298 g~~~~l~~~-~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~ 376 (496)
T 3kya_A 298 NTFKQLFTI-ADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQ 376 (496)
T ss_dssp TTEEEEEEC-SSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEE
T ss_pred cccceeEec-CCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeE
Confidence 1 00112 22345689999999997665544 4 88886653 33211 222211 00000 0012234
Q ss_pred EEEEc-------cCCEEEEE-cCCCcEEEEeCCCCeeEEEeecc------------------------ccCeEEEEEeCC
Q psy12614 208 CVAFC-------ADFTIITG-DSGGFVRFWDGKTGVQWSDVKTH------------------------KKDILALTVSED 255 (708)
Q Consensus 208 ~~~~~-------~~~~l~~~-~~dg~i~~wd~~~~~~~~~~~~~------------------------~~~i~~~~~s~~ 255 (708)
.++.. ++|.|+.+ ..+..|+.++ .+|. +.++-+. -.....++++++
T Consensus 377 gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~-~~G~-v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~ 454 (496)
T 3kya_A 377 GVFVKNPDYTGEEEYDFYFVDRLNFCVRKVT-PEGI-VSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDV 454 (496)
T ss_dssp EEEEECTTCCSSCCEEEEEEEGGGTEEEEEC-TTCB-EEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETT
T ss_pred EEEEccccccccCCCeEEEEECCCCEEEEEe-CCCC-EEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECC
Confidence 44444 45665444 4567899998 4564 3344321 123568999997
Q ss_pred -CCEEEEEecCCeEEEEEccC
Q psy12614 256 -ENYLYCAGVDPTVVCFQRTR 275 (708)
Q Consensus 256 -~~~l~~~~~dg~i~iw~~~~ 275 (708)
+++.++=..++.|+.+++..
T Consensus 455 ~g~lyVaD~~N~rIrki~~~~ 475 (496)
T 3kya_A 455 KEMFYVHDQVGHTIRTISMEQ 475 (496)
T ss_dssp TTEEEEEETTTTEEEEEEECC
T ss_pred CCEEEEEeCCCCEEEEEECCC
Confidence 65444444567899998876
|
| >1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1 | Back alignment and structure |
|---|
Probab=98.06 E-value=0.01 Score=57.57 Aligned_cols=233 Identities=9% Similarity=0.121 Sum_probs=158.0
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe-CCEEEEEcCCCcEEEEECCC-CeEeEEEe
Q psy12614 31 CIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF-NDRLFSGGLQGFVNEYDMRR-LNIKSSTA 108 (708)
Q Consensus 31 ~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~-~~~l~s~~~d~~i~vwd~~~-~~~~~~~~ 108 (708)
+.-.+|..+.||.=. ..++.|+|+++...+. ... +...|.--.|- .+.|+-.+ +..|.-|+++. ..+.+.+.
T Consensus 70 sAIMnP~~~iiALra-g~~lQiFnle~K~klk-s~~---~~e~VvfWkWis~~~l~lVT-~taVyHWsi~~~s~P~kvFd 143 (494)
T 1bpo_A 70 SAIMNPASKVIALKA-GKTLQIFNIEMKSKMK-AHT---MTDDVTFWKWISLNTVALVT-DNAVYHWSMEGESQPVKMFD 143 (494)
T ss_dssp EEEECSSSSCEEEEE-TTEEEEEETTTTEEEE-EEE---CSSCCCEEEEEETTEEEEEC-SSEEEEEESSSSCCCEEEEE
T ss_pred eeeeCCCCcEEEEec-CCeEEEEchHHhhhhc-cee---cCCCceEEEecCCCeEEEEc-CCeeEEecccCCCCchhhee
Confidence 455688888888765 5689999999977654 333 33567777777 66666554 46799999975 35666666
Q ss_pred ec----CCceEEEEEecCCCEEEEEeC-------CCcEEEEEccCCcEEEEEecccccccEEEEEECCCC---CEEEEec
Q psy12614 109 VT----SGTCWCLSVHKKKRLLAAGTE-------QGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSG---DYLVTGC 174 (708)
Q Consensus 109 ~~----~~~v~~~~~s~~~~~la~~~~-------d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~---~~l~~~~ 174 (708)
.| ...|.....+++.++++..+- .|.+.+|..+.+.. +.+.+|.+....+....+. +.++.+.
T Consensus 144 R~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~s---Q~ieGhaa~F~~~~~~g~~~~~~lf~fa~ 220 (494)
T 1bpo_A 144 RHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVS---QPIEGHAASFAQFKMEGNAEESTLFCFAV 220 (494)
T ss_dssp CCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCCE---EEECCSEEEEEEEECTTCSSEEEEEEEEE
T ss_pred cchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeecccccc---chheeeeeeeEEEecCCCCCCceEEEEEE
Confidence 54 457888888999998875432 47789999987766 6788887766555543221 2344443
Q ss_pred C---C-eEEEEEcCCC--------ceEEEEEecccCCCCCceeEEEEEEccC-CEEEEEcCCCcEEEEeCCCCeeEEEee
Q psy12614 175 A---A-AVRVWDIHKG--------HAIHKMSLDKSSKFSKNTAVWCVAFCAD-FTIITGDSGGFVRFWDGKTGVQWSDVK 241 (708)
Q Consensus 175 ~---d-~i~iwd~~~~--------~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l~~~~~dg~i~~wd~~~~~~~~~~~ 241 (708)
. . .+++.++... +....+..+.. ...+...++..++. |-+...+.-|.|++||++++.++..-+
T Consensus 221 r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe---~~~DFPvamqvs~kygviyviTK~G~i~lyDleTgt~i~~nr 297 (494)
T 1bpo_A 221 RGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPE---AQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNR 297 (494)
T ss_dssp CSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTT---STTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred ecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcc---cccCceeEEEecccCCEEEEEecCceEEEEecccceeeeeec
Confidence 3 2 6788877432 11111111111 11444556666664 457788889999999999999988877
Q ss_pred ccccCeEEEEEeCCCCEEEEEecCCeEEEEEccC
Q psy12614 242 THKKDILALTVSEDENYLYCAGVDPTVVCFQRTR 275 (708)
Q Consensus 242 ~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~ 275 (708)
-....|...+...+..-++.....|.|.--.++.
T Consensus 298 Is~~~iF~t~~~~~~~Gi~~Vnr~GqVl~v~v~e 331 (494)
T 1bpo_A 298 ISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEE 331 (494)
T ss_dssp CCSSCEEEEEEETTTTEEEEEETTCEEEEEEECT
T ss_pred ccCCceEEecccCCCCcEEEEccCceEEEEEEcc
Confidence 6777787777776666777777888887777765
|
| >3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.01 E-value=0.0082 Score=65.23 Aligned_cols=232 Identities=9% Similarity=0.037 Sum_probs=140.8
Q ss_pred CcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEE-EEcCCCcEEEEECCCC--
Q psy12614 27 KVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLF-SGGLQGFVNEYDMRRL-- 101 (708)
Q Consensus 27 ~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~-s~~~d~~i~vwd~~~~-- 101 (708)
..-+|.+..+.. +|+.+. ...|+..++....... ...+ . ..+.+|+|. .+.|+ +-...+.|+.+++...
T Consensus 385 ~~~~C~~~~~~p-~Ll~an-~~~Ir~i~l~~~~~~~-l~~~-~--~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~ 458 (791)
T 3m0c_C 385 HTKACKAVGSIA-YLFFTN-RHEVRKMTLDRSEYTS-LIPN-L--RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHG 458 (791)
T ss_dssp SCCCCEETTSCC-EEEEEC-BSSEEEECTTSCCCEE-EECS-C--SSEEEEEEETTTTEEEEEETTTTEEEEEEC-----
T ss_pred CCceeeeccccc-cccccc-ccceeEeeccCCccee-eecC-C--CceEEEeecccCCeeEEeeccceeEEEEeccCCCC
Confidence 334455544333 444443 4578888888765543 3433 3 578899998 45555 5456788999998763
Q ss_pred --eEeEEEeecCCceEEEEEecCCCEEEEE-eCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecC--C
Q psy12614 102 --NIKSSTAVTSGTCWCLSVHKKKRLLAAG-TEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCA--A 176 (708)
Q Consensus 102 --~~~~~~~~~~~~v~~~~~s~~~~~la~~-~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~--d 176 (708)
.....+.........|++.+.+..|+.+ ...+.|.+.++.+.... ..+...-.....|++.|.+.+|+.+.. .
T Consensus 459 ~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~--~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~ 536 (791)
T 3m0c_C 459 VSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRK--TLFRENGSKPRAIVVDPVHGFMYWTDWGTP 536 (791)
T ss_dssp ---CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEE--EEEECTTCCEEEEEEETTTTEEEEEECSSS
T ss_pred CcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCCCCeEE--EEEeCCCCCcceEEEecCCCCEEEecCCCC
Confidence 2233333344567789999887666554 45788999999876653 223333456889999998767766543 2
Q ss_pred -eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCC-EEEEE-cCCCcEEEEeCCCCeeEEEeec--cccCeEEEE
Q psy12614 177 -AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADF-TIITG-DSGGFVRFWDGKTGVQWSDVKT--HKKDILALT 251 (708)
Q Consensus 177 -~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~~~-~~dg~i~~wd~~~~~~~~~~~~--~~~~i~~~~ 251 (708)
.|...++. |.....+... .-.....|++.+.+ +|+.+ ...+.|...++........+.. .-....+|+
T Consensus 537 ~~I~~~~~d-G~~~~~lv~~------~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~gla 609 (791)
T 3m0c_C 537 AKIKKGGLN-GVDIYSLVTE------NIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLA 609 (791)
T ss_dssp CEEEEEETT-SCCEEEEECS------SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEE
T ss_pred CeEEEEecC-CCceEEEEeC------CCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEE
Confidence 78888875 4444444322 14568899999654 65554 4457899999864433333332 122345666
Q ss_pred EeCCCCEEEEEe-cCCeEEEEEccC
Q psy12614 252 VSEDENYLYCAG-VDPTVVCFQRTR 275 (708)
Q Consensus 252 ~s~~~~~l~~~~-~dg~i~iw~~~~ 275 (708)
+.. .+|+.+. ..+.|...+..+
T Consensus 610 v~~--~~lYwtD~~~~~I~~~dk~t 632 (791)
T 3m0c_C 610 VFE--DKVFWTDIINEAIFSANRLT 632 (791)
T ss_dssp EET--TEEEEEETTTTEEEEEETTT
T ss_pred EeC--CEEEEEECCCCEEEEEeCCC
Confidence 643 3555554 456777777666
|
| >1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A | Back alignment and structure |
|---|
Probab=97.93 E-value=2.3e-05 Score=84.64 Aligned_cols=216 Identities=11% Similarity=0.016 Sum_probs=127.8
Q ss_pred CcEEEEEEcCCCCEEEEEe-CCCcEEEEeCCC----CCeEEEEEecCCCCCcEEEEEEe--C-CEEEEEcCCCcEEEEEC
Q psy12614 27 KVINCIACEPKSSRLAVSR-ADQSIEIWDISE----TPHVDRVFIGDPLSNSIECLTWF--N-DRLFSGGLQGFVNEYDM 98 (708)
Q Consensus 27 ~~v~~~~~s~~~~~la~~~-~dg~v~iwd~~~----~~~~~~~~~~h~~~~~v~~l~~~--~-~~l~s~~~d~~i~vwd~ 98 (708)
..+..++|++.+..|..+. ..+.|..+++.. ..... .+.... .....|++. + +++++-...+.|.+.++
T Consensus 406 ~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~-~i~~~~--~~P~glavD~~~g~LY~tD~~~~~I~v~d~ 482 (699)
T 1n7d_A 406 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDT-VISRDI--QAPDGLAVDWIHSNIYWTDSVLGTVSVADT 482 (699)
T ss_dssp TTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCC-BCCSCC----CCCEECCCSSSBCEECCTTTSCEEEEBS
T ss_pred cceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEE-EEeCCC--CCcceEEEEeeCCcEEEEeccCCeEEEEec
Confidence 4566889998777776653 457899999875 22111 222111 234556765 4 44455456789999998
Q ss_pred CCCeEeEEEeecCCceEEEEEecCCCEEEEEeC--CCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecC-
Q psy12614 99 RRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTE--QGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCA- 175 (708)
Q Consensus 99 ~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~--d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~- 175 (708)
........+.........++++|.+.+|+.+.. .+.|..+++...... ..+...-.....|+|+|++..|+.+..
T Consensus 483 dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~--~l~~~~l~~PnGlavd~~~~~LY~aD~~ 560 (699)
T 1n7d_A 483 KGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIY--SLVTENIQWPNGITLDLLSGRLYWVDSK 560 (699)
T ss_dssp SSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCC--EESCSSCSSCCCEEECTTTCCEEEEETT
T ss_pred CCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCee--EEEeCCCCCccEEEEeccCCEEEEEecC
Confidence 865544433333355678999997666655432 267888777654332 122222345678999998776665554
Q ss_pred C-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEE
Q psy12614 176 A-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTV 252 (708)
Q Consensus 176 d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~ 252 (708)
. .|..+++.. .....+.... ........+++..+..+++-...+.|..++..+|+.+..+.........+++
T Consensus 561 ~~~I~~~d~dG-~~~~~~~~~~----~~~~~P~glavd~~~lywtd~~~~~V~~~d~~~G~~~~~i~~~~~~P~~i~v 633 (699)
T 1n7d_A 561 LHSISSIDVNG-GNRKTILEDE----KRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLAENLLSPEDMVL 633 (699)
T ss_dssp TTEEEEECSSS-SCCEEECCCS----SSCSSCCCCEEETTEEEEECSTTTCEEEEETTTEEEEECCCTTCSSCCCCCB
T ss_pred CCeEEEEccCC-CceEEEEecC----CcCCCceEeEEECCEEEEEeCCCCeEEEEEccCCCceEEeecCCCCCcEEEE
Confidence 4 899999864 3333332210 0012234555555533555566789999998888887777543333344443
|
| >2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis} | Back alignment and structure |
|---|
Probab=97.89 E-value=0.0023 Score=60.28 Aligned_cols=162 Identities=11% Similarity=0.122 Sum_probs=112.2
Q ss_pred CCceEEEEEecCCCEEEEEe-CCCcEEEEEccCCcEEEEEecccc------cccEEEEEE---CCCCCEEEEec------
Q psy12614 111 SGTCWCLSVHKKKRLLAAGT-EQGHINLFQISDEGLLYEKLLDRQ------QGRILCTAW---HSSGDYLVTGC------ 174 (708)
Q Consensus 111 ~~~v~~~~~s~~~~~la~~~-~d~~i~iwd~~~~~~~~~~~~~~~------~~~v~~~~~---s~d~~~l~~~~------ 174 (708)
..-..+++|++....|..++ ..++|..||...+..... .+.+- ...+..+.| .|++.++++..
T Consensus 12 ~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~-~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~ 90 (334)
T 2p9w_A 12 NLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNV-VIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFN 90 (334)
T ss_dssp TCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEE-CCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTC
T ss_pred ccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEE-ecCCccccCCCcceeeEEEEeccCCCCcEEEEEccccccc
Confidence 34455789988666666666 689999999986655422 33321 124689999 68877777543
Q ss_pred -------CC-eEEEEEcC---CCceEEEEEecccCCCC-------CceeEEEEEEccCCE-EEEEcCC-CcEEEEeCCCC
Q psy12614 175 -------AA-AVRVWDIH---KGHAIHKMSLDKSSKFS-------KNTAVWCVAFCADFT-IITGDSG-GFVRFWDGKTG 234 (708)
Q Consensus 175 -------~d-~i~iwd~~---~~~~~~~~~~~~~~~~~-------~~~~v~~~~~~~~~~-l~~~~~d-g~i~~wd~~~~ 234 (708)
.+ .|..+|+. +++.+.......... + .......++..++|+ +++++.. +.|...+.. |
T Consensus 91 ~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~-~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pd-G 168 (334)
T 2p9w_A 91 FADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQD-EFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSAD-G 168 (334)
T ss_dssp TTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHH-HHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTT-S
T ss_pred ccccccCCCCEEEEEcCCcCCCCCEEEEecCccccc-cccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCC-C
Confidence 24 79999999 888877776431000 0 124688999999997 6777777 888888865 4
Q ss_pred eeEEEee------ccccCeEEEEEeCCCCEEEEEecCCeEEEEEccC
Q psy12614 235 VQWSDVK------THKKDILALTVSEDENYLYCAGVDPTVVCFQRTR 275 (708)
Q Consensus 235 ~~~~~~~------~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~ 275 (708)
+.+..+. ......+.+++.|+|+.|++....|.+..+|+..
T Consensus 169 ~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~ 215 (334)
T 2p9w_A 169 KTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSK 215 (334)
T ss_dssp CCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSS
T ss_pred CEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCC
Confidence 3333321 1122367999999999999988899999999875
|
| >3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.88 E-value=0.0058 Score=61.77 Aligned_cols=240 Identities=10% Similarity=0.039 Sum_probs=137.8
Q ss_pred ceEEEEEec-CCCEEEEEeC-CCcEEEEEccCCcEEEEEeccc-ccccEEEEEE-------CCCCCEEEEecCC------
Q psy12614 113 TCWCLSVHK-KKRLLAAGTE-QGHINLFQISDEGLLYEKLLDR-QQGRILCTAW-------HSSGDYLVTGCAA------ 176 (708)
Q Consensus 113 ~v~~~~~s~-~~~~la~~~~-d~~i~iwd~~~~~~~~~~~~~~-~~~~v~~~~~-------s~d~~~l~~~~~d------ 176 (708)
....|+|+| +...|.++.. .+.|++.|.+++.+........ .......++| ++++++|+++...
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~ 219 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDE 219 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCccc
Confidence 356899998 3444554443 4678999999888753222111 2235899999 9999966655432
Q ss_pred --eEEEEEcCC-CceE-----EEEEecccCCCCCceeEEEEEEccC-CE-EEEEcCCCcEEEEeCC-------CCee---
Q psy12614 177 --AVRVWDIHK-GHAI-----HKMSLDKSSKFSKNTAVWCVAFCAD-FT-IITGDSGGFVRFWDGK-------TGVQ--- 236 (708)
Q Consensus 177 --~i~iwd~~~-~~~~-----~~~~~~~~~~~~~~~~v~~~~~~~~-~~-l~~~~~dg~i~~wd~~-------~~~~--- 236 (708)
.|.+++... +... ..+.. -.....++++|+ +. +++-..++.|..+|+. ++..
T Consensus 220 ~~~V~~i~r~~~G~~~~~~~~~~v~~--------~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp 291 (496)
T 3kya_A 220 SPSVYIIKRNADGTFDDRSDIQLIAA--------YKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDP 291 (496)
T ss_dssp EEEEEEEECCTTSCCSTTSCEEEEEE--------ESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCC
T ss_pred CceEEEEecCCCCceeecccceeecc--------CCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecc
Confidence 366776443 2221 22221 122457788994 45 4556677889999987 5543
Q ss_pred --------EEE-ee-ccccCeEEEEEeCCCCEEEEEe-cCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEecc----
Q psy12614 237 --------WSD-VK-THKKDILALTVSEDENYLYCAG-VDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIH---- 301 (708)
Q Consensus 237 --------~~~-~~-~~~~~i~~~~~s~~~~~l~~~~-~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~---- 301 (708)
... +. +.......++|+|+|++|+.+. ..+.|+.++..... +. +.....+.+.
T Consensus 292 ~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~------~~------~~~~~~~aG~~g~~ 359 (496)
T 3kya_A 292 IVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIK------KE------FITPYNFVGGYKQS 359 (496)
T ss_dssp BGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTT------TE------ECCCEEEEEBTTBC
T ss_pred cccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCc------ce------ecccEEecCCCCCC
Confidence 112 11 1234457899999999766654 45788887665310 00 0000011110
Q ss_pred -----------ccceE-EEEE--------e-CCEEEEEcCCCeEEEEeCCCCceeecCc---------------------
Q psy12614 302 -----------EGDVK-SLAL--------H-GNRLYSGGLDSYLSLSYYPPKTLVKYPC--------------------- 339 (708)
Q Consensus 302 -----------~~~v~-~l~~--------~-~~~l~s~~~d~~i~iw~~~~~~~~~~~~--------------------- 339 (708)
-.... .++. . +.++++-.....|+.++... .+..+.+
T Consensus 360 G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~~~G-~v~TiaG~g~~~~~~~~~~~G~~dG~~~ 438 (496)
T 3kya_A 360 GYRDDVGTEARMNNPCQGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVTPEG-IVSTYAGRGASTSLADGNQWGTDDGDLR 438 (496)
T ss_dssp CCBCCBGGGCBCSSEEEEEEEECTTCCSSCCEEEEEEEGGGTEEEEECTTC-BEEEEEESCTTHHHHHSCSCCCCCEETT
T ss_pred cccCCcccccccCCCeEEEEEccccccccCCCeEEEEECCCCEEEEEeCCC-CEEEEecccccccccCccccccCCCCch
Confidence 01122 3333 2 45555556677888887433 3333221
Q ss_pred ---cCCCCceEEEEcC-CcEEEEE-cCCeEEEEEecCCC
Q psy12614 340 ---TLAQSTPVSLAKD-IQHVLLQ-YTSHLELWSLGSAQ 373 (708)
Q Consensus 340 ---~~~~~~~~~~s~~-~~~l~~~-~~~~i~i~~~~~~~ 373 (708)
.+..+..++++++ |.+.++- .++.|+.++++...
T Consensus 439 ~~a~f~~P~gIavd~~~g~lyVaD~~N~rIrki~~~~~~ 477 (496)
T 3kya_A 439 EVARFRDVSGLVYDDVKEMFYVHDQVGHTIRTISMEQEE 477 (496)
T ss_dssp TTCCCSSEEEEEEETTTTEEEEEETTTTEEEEEEECCCC
T ss_pred hhhhcCCCcEEEEECCCCEEEEEeCCCCEEEEEECCCCc
Confidence 1233457899996 7777774 67789999887654
|
| >3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A | Back alignment and structure |
|---|
Probab=97.88 E-value=0.0054 Score=58.36 Aligned_cols=180 Identities=12% Similarity=0.235 Sum_probs=118.2
Q ss_pred CEEEEEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEecC----CCE--EEEE-eC---CCcEEEEEcc--CCcEEEEE
Q psy12614 82 DRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKK----KRL--LAAG-TE---QGHINLFQIS--DEGLLYEK 149 (708)
Q Consensus 82 ~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~----~~~--la~~-~~---d~~i~iwd~~--~~~~~~~~ 149 (708)
.+++.....+-+.++|+ +|+.+..+.. +.++.+..-|+ |+. +|.+ .. +++|.+|++. ++.+.
T Consensus 41 s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~--- 114 (355)
T 3amr_A 41 SKLITTNKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQ--- 114 (355)
T ss_dssp CEEEEEETTTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEE---
T ss_pred cEEEEEcCCCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCcee---
Confidence 45666667789999999 8888888754 56777777663 222 3333 33 5789999774 45442
Q ss_pred eccc------cc-ccEEEEEE--CCC-CC-EEEEecCC-eEEEEEcC-------CCceEEEEEecccCCCCCceeEEEEE
Q psy12614 150 LLDR------QQ-GRILCTAW--HSS-GD-YLVTGCAA-AVRVWDIH-------KGHAIHKMSLDKSSKFSKNTAVWCVA 210 (708)
Q Consensus 150 ~~~~------~~-~~v~~~~~--s~d-~~-~l~~~~~d-~i~iwd~~-------~~~~~~~~~~~~~~~~~~~~~v~~~~ 210 (708)
.+.. .. ..+..+|+ +|. ++ ++++...+ .+..|++. +.+.++++..+ ..+..+.
T Consensus 115 ~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lg--------sq~Egcv 186 (355)
T 3amr_A 115 SMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMN--------SQTEGMA 186 (355)
T ss_dssp ECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECS--------SCEEEEE
T ss_pred eccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCC--------CCcceEE
Confidence 2211 11 45666777 774 44 56677777 88888883 33556666653 4566777
Q ss_pred EccC-CEEEEEcCCCcEEEEeCC-----CCeeEEEee--ccccCeEEEEE--eCCCC-EEEEEe-cCCeEEEEEccC
Q psy12614 211 FCAD-FTIITGDSGGFVRFWDGK-----TGVQWSDVK--THKKDILALTV--SEDEN-YLYCAG-VDPTVVCFQRTR 275 (708)
Q Consensus 211 ~~~~-~~l~~~~~dg~i~~wd~~-----~~~~~~~~~--~~~~~i~~~~~--s~~~~-~l~~~~-~dg~i~iw~~~~ 275 (708)
..+. ++|+.+-++..|..++.+ +++.+..+. .....+..|++ .++++ +|++++ .+....+||...
T Consensus 187 vDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~ 263 (355)
T 3amr_A 187 ADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQG 263 (355)
T ss_dssp EETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESST
T ss_pred EcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCC
Confidence 7764 579999998778888865 345555542 22347888888 45555 666666 567999999963
|
| >2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.78 E-value=0.0082 Score=58.77 Aligned_cols=232 Identities=13% Similarity=0.033 Sum_probs=120.0
Q ss_pred CceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecc---cccccEEEEEECCC---CCEEEEecC-------CeE
Q psy12614 112 GTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLD---RQQGRILCTAWHSS---GDYLVTGCA-------AAV 178 (708)
Q Consensus 112 ~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~---~~~~~v~~~~~s~d---~~~l~~~~~-------d~i 178 (708)
...+.|+|.|||++++ +..++.|++++ +++......+. ........++|+|+ +..|+.+.. +.|
T Consensus 31 ~~P~~ia~~pdG~l~V-~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v 107 (352)
T 2ism_A 31 EVPWALAFLPDGGMLI-AERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQV 107 (352)
T ss_dssp SCEEEEEECTTSCEEE-EETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEE
T ss_pred CCceEEEEcCCCeEEE-EeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEE
Confidence 4578999999998554 46679999998 44432112221 22456889999998 555555443 467
Q ss_pred EEEEcCCCce--EEEE-E-ecc-cCCCCCceeEEEEEEccCCEEEEEcCC--------------CcEEEEeCCCC-----
Q psy12614 179 RVWDIHKGHA--IHKM-S-LDK-SSKFSKNTAVWCVAFCADFTIITGDSG--------------GFVRFWDGKTG----- 234 (708)
Q Consensus 179 ~iwd~~~~~~--~~~~-~-~~~-~~~~~~~~~v~~~~~~~~~~l~~~~~d--------------g~i~~wd~~~~----- 234 (708)
..++...+.. ...+ . ... ... ......++|.|||.|..+..+ |.|.-++....
T Consensus 108 ~r~~~~~~~~~~~~~l~~~~p~~~~~---~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~n 184 (352)
T 2ism_A 108 VRLRHLGERGVLDRVVLDGIPARPHG---LHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGN 184 (352)
T ss_dssp EEEEECSSCEEEEEEEEEEECCCTTC---CCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTC
T ss_pred EEEEeCCCCcCceEEEEEeCCCCCCC---CcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCC
Confidence 7788765421 1111 1 110 000 122358999999985554322 56666665420
Q ss_pred -------eeEEEe-eccccCeEEEEEeC-CCCEEEEEecCCeE------EEEEccCCcccccCCCCCCC---------Cc
Q psy12614 235 -------VQWSDV-KTHKKDILALTVSE-DENYLYCAGVDPTV------VCFQRTRKPQVCSTSGPEQG---------SS 290 (708)
Q Consensus 235 -------~~~~~~-~~~~~~i~~~~~s~-~~~~l~~~~~dg~i------~iw~~~~~~~~~~~~g~~~~---------~~ 290 (708)
.....+ .++ .....++|+| ++++.++-...+.+ .+.-+.. |.... ..
T Consensus 185 pf~~~~~~~~~i~a~G~-rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~--------G~nyGwp~~~g~~~~~ 255 (352)
T 2ism_A 185 PFLGRRGARPEVYSLGH-RNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVP--------GGNYGWPRVVGRGNDP 255 (352)
T ss_dssp TTTTCTTSCTTEEEECC-SEECCCEECTTTCCEEEEEECC------CCCEEEEECT--------TCBCCTTTCCSCCCCT
T ss_pred cccCCCCCCccEEEEcC-CCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEecc--------CCcCCCCcccCCCCCC
Confidence 010111 122 2356789999 55544432222221 2332222 11000 00
Q ss_pred c-eEEeEEEeccccceEEEEEe-CCEEEEEcCCCeEEEEeCCCCc-------eeecCccCCCCceEEEEcCCcEEEEE
Q psy12614 291 V-WVRSVNRVIHEGDVKSLALH-GNRLYSGGLDSYLSLSYYPPKT-------LVKYPCTLAQSTPVSLAKDIQHVLLQ 359 (708)
Q Consensus 291 ~-~~~~~~~~~~~~~v~~l~~~-~~~l~s~~~d~~i~iw~~~~~~-------~~~~~~~~~~~~~~~~s~~~~~l~~~ 359 (708)
. ..+...+ .+......+++. +..+++.-..+.|...+++... ...+......+..+++.|||.+.++.
T Consensus 256 ~~~~p~~~~-~~~~ap~G~~~~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~~ 332 (352)
T 2ism_A 256 RYRDPLYFW-PQGFPPGNLAFFRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETALSGFGRLREVQVGPDGALYVTT 332 (352)
T ss_dssp TSCCCSEEC-TTCCCEEEEEEETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEESSCCEEEEEECTTSCEEEEE
T ss_pred CCcCCeEec-CCCCCCcceEEECCEEEEEECCCCEEEEEEECCCCcceeecchheecccCCCeeEEEECCCCcEEEEE
Confidence 0 0011222 222345677777 6666666666777777765432 12222223455678888888777664
|
| >3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A* | Back alignment and structure |
|---|
Probab=97.76 E-value=0.0097 Score=57.53 Aligned_cols=199 Identities=9% Similarity=0.061 Sum_probs=117.0
Q ss_pred ceeecCccCCCCceEEEEcCCcEEEEE-------------cCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEE
Q psy12614 333 TLVKYPCTLAQSTPVSLAKDIQHVLLQ-------------YTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMS 399 (708)
Q Consensus 333 ~~~~~~~~~~~~~~~~~s~~~~~l~~~-------------~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (708)
.+..+.+.......+++.|+|..++++ .++.|.++|..+.. .....+...
T Consensus 41 ~C~~i~~~~~G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~-----------------~~~~~l~~~ 103 (355)
T 3sre_A 41 NCNLVKGIDNGSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKE-----------------PAVSELEII 103 (355)
T ss_dssp CEEECTTCCSCCCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSS-----------------CCEEECEEE
T ss_pred CCEEeCCCCCCcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCC-----------------CceEEEEcc
Confidence 344554334456677788888777765 57889999987432 011222222
Q ss_pred ec----CCCceEEEEeCC--CCc-EE-EE--Ec-CCceEEEEEEecCCcceeEEeecCCcccccceeEEEEEecCCCeEE
Q psy12614 400 AV----NNATIRCSVVSN--DGK-YV-AY--ST-ESCVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVLISADSTLLL 468 (708)
Q Consensus 400 ~~----~~~~i~~~~~s~--~g~-~l-~~--~~-d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~ 468 (708)
.. .......+.+.+ +|. +| ++ +. +.++.+|+++.......+ +..+.+.. ....+.+++.++|.+.+
T Consensus 104 g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~--~~~~~g~~-~~~pND~~v~~~G~fyv 180 (355)
T 3sre_A 104 GNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLH--LKTIRHKL-LPSVNDIVAVGPEHFYA 180 (355)
T ss_dssp CSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEE--EEEECCTT-CSSEEEEEEEETTEEEE
T ss_pred CCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEE--EeccccCC-CCCCceEEEeCCCCEEe
Confidence 11 123556666644 453 34 34 22 678999999875433222 22233321 34566799999999887
Q ss_pred EEec-----------------CCcEEEecCCCeEEEEEecCCCCCccCcceEEEEECCCCcEEEEEe-cCCeEEEEECC-
Q psy12614 469 AVSL-----------------NGPLYIIDLSSLEIKYCVDPYKSNLMSDVISLVQMSECKQYIVCAD-RKSHVVIWKNG- 529 (708)
Q Consensus 469 ~~~~-----------------dg~i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-~d~~i~iw~~~- 529 (708)
+... .|.+|.++.+..+.+ ... -..-+.++||||+++|+.+. ..+.|..|++.
T Consensus 181 t~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~~~~~~--~~~------l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~ 252 (355)
T 3sre_A 181 TNDHYFIDPYLKSWEMHLGLAWSFVTYYSPNDVRVV--AEG------FDFANGINISPDGKYVYIAELLAHKIHVYEKHA 252 (355)
T ss_dssp EESCSCSSHHHHHHHHHTTCCCEEEEEECTTCCEEE--EEE------ESSEEEEEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred cCCcEeCCcccccchhhccCCccEEEEEECCeEEEe--ecC------CcccCcceECCCCCEEEEEeCCCCeEEEEEECC
Confidence 6541 122888877643322 111 23568899999999888776 56899999986
Q ss_pred c--e--eeecCCCCCCceEEEEcC-CCCEEEEEecC
Q psy12614 530 Q--H--HASLPRYRKPSTAMAIHP-TLSTLVTVYSD 560 (708)
Q Consensus 530 ~--~--~~~~~~~~~~v~~l~~s~-d~~~l~~~~~d 560 (708)
. . ...+ .....+-.+++.+ +|++.+++..+
T Consensus 253 ~g~l~~~~~~-~~~g~PDGi~vD~e~G~lwva~~~~ 287 (355)
T 3sre_A 253 NWTLTPLRVL-SFDTLVDNISVDPVTGDLWVGCHPN 287 (355)
T ss_dssp TSCEEEEEEE-ECSSEEEEEEECTTTCCEEEEEESC
T ss_pred CCcEecCEEE-eCCCCCceEEEeCCCCcEEEEecCC
Confidence 1 1 1123 2245567788887 47766655433
|
| >2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.73 E-value=0.0074 Score=57.75 Aligned_cols=226 Identities=13% Similarity=0.065 Sum_probs=115.9
Q ss_pred CCCEEEEEe-CC-----CcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe-CCEEEEEcCC-----CcEEEEECCCCe--
Q psy12614 37 KSSRLAVSR-AD-----QSIEIWDISETPHVDRVFIGDPLSNSIECLTWF-NDRLFSGGLQ-----GFVNEYDMRRLN-- 102 (708)
Q Consensus 37 ~~~~la~~~-~d-----g~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~-~~~l~s~~~d-----~~i~vwd~~~~~-- 102 (708)
++.+++.|+ .+ ..+.+||+.+++... +..-.....-.+++.. +..++.|+.+ ..+.+||..+.+
T Consensus 14 ~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~--~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~ 91 (301)
T 2vpj_A 14 NEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSF--LPSITRKRRYVASVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDG 91 (301)
T ss_dssp CEEEEEECCEETTTEECCCEEEEETTTTEEEE--CCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTCCTTC
T ss_pred CCEEEEEeCccCCCcceeEEEEEcCCCCeEEe--CCCCChhhccccEEEECCEEEEEcCCCCCccCceEEEEECCCCCCC
Confidence 455666665 32 368999998865432 2211100111222333 6666667654 468999988765
Q ss_pred -EeEEEeecCCceEEEEEecCCCEEEEEeCC-----CcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC
Q psy12614 103 -IKSSTAVTSGTCWCLSVHKKKRLLAAGTEQ-----GHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA 176 (708)
Q Consensus 103 -~~~~~~~~~~~v~~~~~s~~~~~la~~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d 176 (708)
-...-......-...+...+++.++.|+.+ ..+.+||..+.+......+......-..+.+ +++.++.|+.+
T Consensus 92 ~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~ 169 (301)
T 2vpj_A 92 VWYSVAPMNVRRGLAGATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVA--SGVIYCLGGYD 169 (301)
T ss_dssp CCEEECCCSSCCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEE--TTEEEEECCBC
T ss_pred eeEECCCCCCCccceeEEEECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEE--CCEEEEECCCC
Confidence 222111111111111122256677777643 4688999988877543333322222222222 56666666532
Q ss_pred ------eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCC-----CcEEEEeCCCCeeEEE--eec
Q psy12614 177 ------AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSG-----GFVRFWDGKTGVQWSD--VKT 242 (708)
Q Consensus 177 ------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~d-----g~i~~wd~~~~~~~~~--~~~ 242 (708)
.+.+||+.+.+-...-.... ...-.+++.. +++ ++.|+.+ ..+.+||+.+.+-... +..
T Consensus 170 ~~~~~~~~~~~d~~~~~W~~~~~~p~------~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~ 242 (301)
T 2vpj_A 170 GLNILNSVEKYDPHTGHWTNVTPMAT------KRSGAGVALL-NDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTT 242 (301)
T ss_dssp SSCBCCCEEEEETTTTEEEEECCCSS------CCBSCEEEEE-TTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSS
T ss_pred CCcccceEEEEeCCCCcEEeCCCCCc------ccccceEEEE-CCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCC
Confidence 58899988765433211111 1111122222 555 5566553 4689999987754332 221
Q ss_pred cccCeEEEEEeCCCCEEEEEecC-----CeEEEEEccC
Q psy12614 243 HKKDILALTVSEDENYLYCAGVD-----PTVVCFQRTR 275 (708)
Q Consensus 243 ~~~~i~~~~~s~~~~~l~~~~~d-----g~i~iw~~~~ 275 (708)
.......+. -+++.++.|+.+ ..+.+||..+
T Consensus 243 ~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~ 278 (301)
T 2vpj_A 243 PRCYVGATV--LRGRLYAIAGYDGNSLLSSIECYDPII 278 (301)
T ss_dssp CCBSCEEEE--ETTEEEEECCBCSSSBEEEEEEEETTT
T ss_pred cccceeEEE--ECCEEEEEcCcCCCcccccEEEEcCCC
Confidence 112222222 266677777665 3577888876
|
| >2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.72 E-value=0.0054 Score=58.72 Aligned_cols=222 Identities=14% Similarity=0.117 Sum_probs=115.1
Q ss_pred CcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCC-----CcEEEEEccCCc---EEEEEecccccccEEEEE
Q psy12614 91 GFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQ-----GHINLFQISDEG---LLYEKLLDRQQGRILCTA 162 (708)
Q Consensus 91 ~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d-----~~i~iwd~~~~~---~~~~~~~~~~~~~v~~~~ 162 (708)
..+.++|..+.+-...-..........+...++..++.|+.+ ..+.+||..+++ ......+......-..+.
T Consensus 31 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~ 110 (301)
T 2vpj_A 31 DVVEKYDPKTQEWSFLPSITRKRRYVASVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATT 110 (301)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEE
T ss_pred eEEEEEcCCCCeEEeCCCCChhhccccEEEECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEE
Confidence 468889988865322111111111112222356677777754 468999998887 543233322222222222
Q ss_pred ECCCCCEEEEecCC------eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCC-----CcEEEEe
Q psy12614 163 WHSSGDYLVTGCAA------AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSG-----GFVRFWD 230 (708)
Q Consensus 163 ~s~d~~~l~~~~~d------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~d-----g~i~~wd 230 (708)
+ +++.++.|+.+ .+.+||+.+.+-...-.... . ... .+++. -+++ ++.|+.+ ..+.+||
T Consensus 111 ~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~-~----r~~-~~~~~-~~~~iyv~GG~~~~~~~~~~~~~d 181 (301)
T 2vpj_A 111 L--GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQT-A----REG-AGLVV-ASGVIYCLGGYDGLNILNSVEKYD 181 (301)
T ss_dssp E--TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSS-C----CBS-CEEEE-ETTEEEEECCBCSSCBCCCEEEEE
T ss_pred E--CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCC-C----ccc-ceEEE-ECCEEEEECCCCCCcccceEEEEe
Confidence 2 56666666532 58899988766443322221 0 111 11222 2566 5555543 4688999
Q ss_pred CCCCeeEEE--eeccccCeEEEEEeCCCCEEEEEecC-----CeEEEEEccCCcccccCCCCCCCCcceEEeEEEecccc
Q psy12614 231 GKTGVQWSD--VKTHKKDILALTVSEDENYLYCAGVD-----PTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEG 303 (708)
Q Consensus 231 ~~~~~~~~~--~~~~~~~i~~~~~s~~~~~l~~~~~d-----g~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 303 (708)
..+++-... +.........+. -+++.++.|+.+ ..+.+||..+ . .|.....+.....
T Consensus 182 ~~~~~W~~~~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~--------~------~W~~~~~~p~~r~ 245 (301)
T 2vpj_A 182 PHTGHWTNVTPMATKRSGAGVAL--LNDHIYVVGGFDGTAHLSSVEAYNIRT--------D------SWTTVTSMTTPRC 245 (301)
T ss_dssp TTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECCBCSSSBCCCEEEEETTT--------T------EEEEECCCSSCCB
T ss_pred CCCCcEEeCCCCCcccccceEEE--ECCEEEEEeCCCCCcccceEEEEeCCC--------C------cEEECCCCCCccc
Confidence 887754332 221111222222 256666777664 4688899877 3 4655543332222
Q ss_pred ceEEEEEeCCEEEEEcCC-----CeEEEEeCCCCceeec
Q psy12614 304 DVKSLALHGNRLYSGGLD-----SYLSLSYYPPKTLVKY 337 (708)
Q Consensus 304 ~v~~l~~~~~~l~s~~~d-----~~i~iw~~~~~~~~~~ 337 (708)
....+.+.+..++.|+.+ ..+.+||+.+.....+
T Consensus 246 ~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~ 284 (301)
T 2vpj_A 246 YVGATVLRGRLYAIAGYDGNSLLSSIECYDPIIDSWEVV 284 (301)
T ss_dssp SCEEEEETTEEEEECCBCSSSBEEEEEEEETTTTEEEEE
T ss_pred ceeEEEECCEEEEEcCcCCCcccccEEEEcCCCCeEEEc
Confidence 223333336666777655 3577788877664443
|
| >3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A* | Back alignment and structure |
|---|
Probab=97.71 E-value=0.0099 Score=57.47 Aligned_cols=215 Identities=11% Similarity=0.080 Sum_probs=122.5
Q ss_pred eeeeeeccCCCCcEEEEEEcCCCCEEEEE------------eCCCcEEEEeCCC--CCeEEEEEecC-C--CCCcEEEEE
Q psy12614 16 VHNIKFYAPEPKVINCIACEPKSSRLAVS------------RADQSIEIWDISE--TPHVDRVFIGD-P--LSNSIECLT 78 (708)
Q Consensus 16 ~~~~~~~~~h~~~v~~~~~s~~~~~la~~------------~~dg~v~iwd~~~--~~~~~~~~~~h-~--~~~~v~~l~ 78 (708)
...|+.+.+-....-.+++.|+|..++++ ..+|.|.++|..+ .+.....+.+. . .......+.
T Consensus 39 ~~~C~~i~~~~~G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~ 118 (355)
T 3sre_A 39 LPNCNLVKGIDNGSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGIS 118 (355)
T ss_dssp CSCEEECTTCCSCCCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEE
T ss_pred CCCCEEeCCCCCCcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeE
Confidence 34678877634445566788987554444 1689999999984 34333344442 1 014677777
Q ss_pred Ee----CC-EEEEEc-C--CCcEEEEECCCC--e--EeEEEeec-CCceEEEEEecCCCEEEEEeC--------------
Q psy12614 79 WF----ND-RLFSGG-L--QGFVNEYDMRRL--N--IKSSTAVT-SGTCWCLSVHKKKRLLAAGTE-------------- 131 (708)
Q Consensus 79 ~~----~~-~l~s~~-~--d~~i~vwd~~~~--~--~~~~~~~~-~~~v~~~~~s~~~~~la~~~~-------------- 131 (708)
+. +. +|+++. . +.+|.+|+++.. . .+..+.+. -...+.+++.++|.+.++...
T Consensus 119 ~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~ 198 (355)
T 3sre_A 119 TFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHL 198 (355)
T ss_dssp EEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHT
T ss_pred EEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhc
Confidence 74 22 455553 2 567888876653 2 22333322 245789999999987776431
Q ss_pred ---CCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC--eEEEEEcCC-CceEEEEEecccCCCCCcee
Q psy12614 132 ---QGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA--AVRVWDIHK-GHAIHKMSLDKSSKFSKNTA 205 (708)
Q Consensus 132 ---d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d--~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~ 205 (708)
.|.|..+| .++.. .+...-...+.++|+||++.|+.+... .|..|++.. ++....-.... ...
T Consensus 199 ~~~~g~vyr~d--~~~~~---~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~~~------~g~ 267 (355)
T 3sre_A 199 GLAWSFVTYYS--PNDVR---VVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLSF------DTL 267 (355)
T ss_dssp TCCCEEEEEEC--TTCCE---EEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEC------SSE
T ss_pred cCCccEEEEEE--CCeEE---EeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEEeC------CCC
Confidence 23444444 34432 222223456899999999988777644 899999863 33322111111 455
Q ss_pred EEEEEEcc-CCEEEE-EcCC-CcEEEEeCC--CCeeEEEee
Q psy12614 206 VWCVAFCA-DFTIIT-GDSG-GFVRFWDGK--TGVQWSDVK 241 (708)
Q Consensus 206 v~~~~~~~-~~~l~~-~~~d-g~i~~wd~~--~~~~~~~~~ 241 (708)
.-.+++.+ +|.+.+ +..+ +.|..|+.. .+..+..+.
T Consensus 268 PDGi~vD~e~G~lwva~~~~g~~v~~~~P~~~~~s~v~rI~ 308 (355)
T 3sre_A 268 VDNISVDPVTGDLWVGCHPNGMRIFFYDAENPPGSEVLRIQ 308 (355)
T ss_dssp EEEEEECTTTCCEEEEEESCHHHHHSCCTTSCCCEEEEEEE
T ss_pred CceEEEeCCCCcEEEEecCCceEEEEECCCCCCCCEEEEEE
Confidence 67788888 587544 4333 345555543 244444443
|
| >3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A | Back alignment and structure |
|---|
Probab=97.70 E-value=0.012 Score=55.93 Aligned_cols=198 Identities=9% Similarity=0.146 Sum_probs=122.0
Q ss_pred EEEEcC---CCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe------CC---EEEEEc-C--CCcEEE
Q psy12614 31 CIACEP---KSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF------ND---RLFSGG-L--QGFVNE 95 (708)
Q Consensus 31 ~~~~s~---~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~------~~---~l~s~~-~--d~~i~v 95 (708)
++-.+| ...+++.....+-+.+||+ +|+.+. .+.. +.++.+..- |+ ++++.. . +++|.+
T Consensus 30 avw~~~~dp~~s~ii~t~k~~gL~Vydl-~G~~l~-~~~~----g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~v 103 (355)
T 3amr_A 30 AIWLDPKTPQNSKLITTNKKSGLVVYSL-DGKMLH-SYNT----GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEI 103 (355)
T ss_dssp EEECCSSCGGGCEEEEEETTTEEEEEET-TSCEEE-EECC----SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEE
T ss_pred cEecCCCCCCccEEEEEcCCCCEEEEcC-CCcEEE-EccC----CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEE
Confidence 344455 3355555567788999999 777776 5553 345555544 22 233333 3 589999
Q ss_pred EECC--CCeEeEEEee------cC-CceEEEEE--ecC-CC-EEEEEeCCCcEEEEEcc---CCcEE--EEEeccccccc
Q psy12614 96 YDMR--RLNIKSSTAV------TS-GTCWCLSV--HKK-KR-LLAAGTEQGHINLFQIS---DEGLL--YEKLLDRQQGR 157 (708)
Q Consensus 96 wd~~--~~~~~~~~~~------~~-~~v~~~~~--s~~-~~-~la~~~~d~~i~iwd~~---~~~~~--~~~~~~~~~~~ 157 (708)
|++. ++. +..+.. .. ..+..+++ +|. +. ++++...+|.+..|++. .+... ..+.+.- .+.
T Consensus 104 f~iDp~~~~-l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~l-gsq 181 (355)
T 3amr_A 104 YAIDGKNGT-LQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKM-NSQ 181 (355)
T ss_dssp EEECTTTCC-EEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEEC-SSC
T ss_pred EEECCCCCc-eeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecC-CCC
Confidence 9773 433 444421 11 45667888 774 44 57777889999999984 23221 1133332 456
Q ss_pred EEEEEECCCCCEEEEecCC-eEEEEEcC-----CCceEEEEEecccCCCCCceeEEEEEE--ccCC--EEEEEc-CCCcE
Q psy12614 158 ILCTAWHSSGDYLVTGCAA-AVRVWDIH-----KGHAIHKMSLDKSSKFSKNTAVWCVAF--CADF--TIITGD-SGGFV 226 (708)
Q Consensus 158 v~~~~~s~d~~~l~~~~~d-~i~iwd~~-----~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~--~l~~~~-~dg~i 226 (708)
+..+...+...+|+.+-++ .|..++.+ +++.+..+... .....+..|++ .+++ .+++.+ .+...
T Consensus 182 ~EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g-----~l~aDvEGLai~~~~~g~gyLivSsQG~~s~ 256 (355)
T 3amr_A 182 TEGMAADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGR-----HLTRDIEGLTIYYAADGKGYLMASSQGNSSY 256 (355)
T ss_dssp EEEEEEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSS-----SBCSCEEEEEEEECGGGCEEEEEEEGGGTEE
T ss_pred cceEEEcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEecCC-----ccccCcceEEEEecCCCCEEEEEEcCCCCEE
Confidence 8889999999999999999 88888855 23444333222 11345777777 4454 344444 57799
Q ss_pred EEEeCC-CCeeEEEee
Q psy12614 227 RFWDGK-TGVQWSDVK 241 (708)
Q Consensus 227 ~~wd~~-~~~~~~~~~ 241 (708)
.+||.+ +.+.+..+.
T Consensus 257 ~Vydr~~~~~~vg~f~ 272 (355)
T 3amr_A 257 AIYDRQGKNKYVADFR 272 (355)
T ss_dssp EEEESSTTCCEEEEEE
T ss_pred EEEECCCCCcEEEEEE
Confidence 999986 556666553
|
| >3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.63 E-value=0.023 Score=54.36 Aligned_cols=224 Identities=12% Similarity=0.068 Sum_probs=116.3
Q ss_pred CEEEEEeC--CCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe-CCEEEEEcCC----CcEEEEECCCCeEeEEEeecC
Q psy12614 39 SRLAVSRA--DQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF-NDRLFSGGLQ----GFVNEYDMRRLNIKSSTAVTS 111 (708)
Q Consensus 39 ~~la~~~~--dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~-~~~l~s~~~d----~~i~vwd~~~~~~~~~~~~~~ 111 (708)
.+++.|+. ...+.+||..+++-.. +..-.....-.+++.. +..++.|+.+ ..+.++|..+.+-...-....
T Consensus 13 ~l~~~GG~~~~~~~~~~d~~~~~W~~--~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~ 90 (306)
T 3ii7_A 13 YRIALFGGSQPQSCRYFNPKDYSWTD--IRCPFEKRRDAACVFWDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPT 90 (306)
T ss_dssp EEEEEECCSSTTSEEEEETTTTEEEE--CCCCSCCCBSCEEEEETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSS
T ss_pred eEEEEeCCCCCceEEEecCCCCCEec--CCCCCcccceeEEEEECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCc
Confidence 34556654 3579999998876432 2111100111222223 6666677654 678899998876432221111
Q ss_pred CceEEEEEecCCCEEEEEeCC------CcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecC---------C
Q psy12614 112 GTCWCLSVHKKKRLLAAGTEQ------GHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCA---------A 176 (708)
Q Consensus 112 ~~v~~~~~s~~~~~la~~~~d------~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~---------d 176 (708)
......+..-+++.++.|+.+ ..+.+||..+.+......+......-..+.+ +++.++.|+. -
T Consensus 91 ~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~ 168 (306)
T 3ii7_A 91 PRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEA--NGLIYVCGGSLGNNVSGRVL 168 (306)
T ss_dssp CCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEESCTTTCEEC
T ss_pred cccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEE--CCEEEEECCCCCCCCccccc
Confidence 111111222366777777754 4589999998877533222221111122222 5666666652 2
Q ss_pred -eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCC-----CcEEEEeCCCCeeEEE--eeccccCe
Q psy12614 177 -AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSG-----GFVRFWDGKTGVQWSD--VKTHKKDI 247 (708)
Q Consensus 177 -~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~d-----g~i~~wd~~~~~~~~~--~~~~~~~i 247 (708)
.+.+||+.+.+-...-.... ...-.+++.. +++ ++.|+.+ ..+.+||+.+.+-... +.......
T Consensus 169 ~~~~~yd~~~~~W~~~~~~p~------~r~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~ 241 (306)
T 3ii7_A 169 NSCEVYDPATETWTELCPMIE------ARKNHGLVFV-KDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTV 241 (306)
T ss_dssp CCEEEEETTTTEEEEECCCSS------CCBSCEEEEE-TTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCBSCC
T ss_pred ceEEEeCCCCCeEEECCCccc------hhhcceEEEE-CCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCccce
Confidence 58899998775433221111 1111122222 565 5555543 4688999987653322 22222222
Q ss_pred EEEEEeCCCCEEEEEecC-----CeEEEEEccC
Q psy12614 248 LALTVSEDENYLYCAGVD-----PTVVCFQRTR 275 (708)
Q Consensus 248 ~~~~~s~~~~~l~~~~~d-----g~i~iw~~~~ 275 (708)
.++.+ +++.++.|+.+ ..+.+||..+
T Consensus 242 ~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~ 272 (306)
T 3ii7_A 242 KCAAV--GSIVYVLAGFQGVGRLGHILEYNTET 272 (306)
T ss_dssp EEEEE--TTEEEEEECBCSSSBCCEEEEEETTT
T ss_pred eEEEE--CCEEEEEeCcCCCeeeeeEEEEcCCC
Confidence 33333 66677777754 4688888877
|
| >2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.62 E-value=0.059 Score=52.60 Aligned_cols=246 Identities=13% Similarity=0.093 Sum_probs=122.0
Q ss_pred eeEEEEEEccCCEEEEEcCCCcEEEEeCCCCee--EEEee---ccccCeEEEEEeCC---CCEEEEEecC------CeEE
Q psy12614 204 TAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQ--WSDVK---THKKDILALTVSED---ENYLYCAGVD------PTVV 269 (708)
Q Consensus 204 ~~v~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~--~~~~~---~~~~~i~~~~~s~~---~~~l~~~~~d------g~i~ 269 (708)
...+.++|.|||+++++...|.|++++ +++. +..+. ........++++|+ +..|+++... +.|.
T Consensus 31 ~~P~~ia~~pdG~l~V~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~ 108 (352)
T 2ism_A 31 EVPWALAFLPDGGMLIAERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVV 108 (352)
T ss_dssp SCEEEEEECTTSCEEEEETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEE
T ss_pred CCceEEEEcCCCeEEEEeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEE
Confidence 446799999999988888889999998 4442 22221 12356789999998 5566655442 5677
Q ss_pred EEEccCCcccccCCCCCCCCcceEEeEEEe---ccccceEEEEEe--CCEEEEEcC-------------CCeEEEEeCCC
Q psy12614 270 CFQRTRKPQVCSTSGPEQGSSVWVRSVNRV---IHEGDVKSLALH--GNRLYSGGL-------------DSYLSLSYYPP 331 (708)
Q Consensus 270 iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~---~~~~~v~~l~~~--~~~l~s~~~-------------d~~i~iw~~~~ 331 (708)
.|+... +. ....+ .....+. ...+....++|. |.+.++.+. .+.|..++.+.
T Consensus 109 r~~~~~--------~~-~~~~~-~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG 178 (352)
T 2ism_A 109 RLRHLG--------ER-GVLDR-VVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEG 178 (352)
T ss_dssp EEEECS--------SC-EEEEE-EEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTS
T ss_pred EEEeCC--------CC-cCceE-EEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCC
Confidence 777764 21 00000 0111122 112234578887 555554332 14566666554
Q ss_pred Cc-------------eeecCccCCCCceEEEEc-CCcEEEEEcC-CeE------EEEEecCCCC---CCCCCCCCCCccc
Q psy12614 332 KT-------------LVKYPCTLAQSTPVSLAK-DIQHVLLQYT-SHL------ELWSLGSAQS---TDLSSHSNTTGVP 387 (708)
Q Consensus 332 ~~-------------~~~~~~~~~~~~~~~~s~-~~~~l~~~~~-~~i------~i~~~~~~~~---~~~~~~~~~~~~~ 387 (708)
.. ...+......+..++++| ++.+.++... +.+ .+..+..+.. ....+.... +
T Consensus 179 ~~p~~npf~~~~~~~~~i~a~G~rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~g~~~~---~ 255 (352)
T 2ism_A 179 EPAPGNPFLGRRGARPEVYSLGHRNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRVVGRGND---P 255 (352)
T ss_dssp SBCTTCTTTTCTTSCTTEEEECCSEECCCEECTTTCCEEEEEECC------CCCEEEEECTTCBCCTTTCCSCCCC---T
T ss_pred CCCCCCcccCCCCCCccEEEEcCCCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcccCCCCC---C
Confidence 11 011111123356789999 6777776432 221 2333333221 000010000 0
Q ss_pred CCCCceEEEEEEecCCCceEEEEeCCCCcEEEEEc-CCceEEEEEEecCCcceeEEeecCCcccccceeEEEEEecCCCe
Q psy12614 388 LLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYST-ESCVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVLISADSTL 466 (708)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~-d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~ 466 (708)
-...+ +... ........++| .+|.++++.. .+.|...+++.............+-.. ...+..+++.|||.+
T Consensus 256 ~~~~p--~~~~--~~~~ap~G~~~-~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~--~~rp~~v~~~pdG~l 328 (352)
T 2ism_A 256 RYRDP--LYFW--PQGFPPGNLAF-FRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETALSG--FGRLREVQVGPDGAL 328 (352)
T ss_dssp TSCCC--SEEC--TTCCCEEEEEE-ETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEES--SCCEEEEEECTTSCE
T ss_pred CCcCC--eEec--CCCCCCcceEE-ECCEEEEEECCCCEEEEEEECCCCcceeecchheeccc--CCCeeEEEECCCCcE
Confidence 00001 1111 22234566777 4676655543 667777777653321101111111111 235677999999977
Q ss_pred EEEEe
Q psy12614 467 LLAVS 471 (708)
Q Consensus 467 l~~~~ 471 (708)
.++..
T Consensus 329 yv~~~ 333 (352)
T 2ism_A 329 YVTTS 333 (352)
T ss_dssp EEEEC
T ss_pred EEEEe
Confidence 76654
|
| >3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.58 E-value=0.033 Score=53.33 Aligned_cols=230 Identities=11% Similarity=0.050 Sum_probs=121.0
Q ss_pred EEEEEcC--CCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCC----CcEEEEEccCCcEEEEEecccccc
Q psy12614 83 RLFSGGL--QGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQ----GHINLFQISDEGLLYEKLLDRQQG 156 (708)
Q Consensus 83 ~l~s~~~--d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d----~~i~iwd~~~~~~~~~~~~~~~~~ 156 (708)
.++.|+. ...+.+||..+.+-...-..........+..-++..++.|+.+ ..+.+||..+++......+.....
T Consensus 14 l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~ 93 (306)
T 3ii7_A 14 RIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVFWDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRD 93 (306)
T ss_dssp EEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEEETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCB
T ss_pred EEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEEECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCcccc
Confidence 3444543 4678899988876332111111111111222366677777754 678999999887754333332222
Q ss_pred cEEEEEECCCCCEEEEecCC-------eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcC------
Q psy12614 157 RILCTAWHSSGDYLVTGCAA-------AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDS------ 222 (708)
Q Consensus 157 ~v~~~~~s~d~~~l~~~~~d-------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~------ 222 (708)
.-..+.+ +++.++.|+.+ .+.+||..+.+-...-.... ...-.+++. -+++ ++.|+.
T Consensus 94 ~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~------~r~~~~~~~-~~~~iyv~GG~~~~~~~ 164 (306)
T 3ii7_A 94 SLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLT------QRCSHGMVE-ANGLIYVCGGSLGNNVS 164 (306)
T ss_dssp SCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSS------CCBSCEEEE-ETTEEEEECCEESCTTT
T ss_pred ceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcC------CcceeEEEE-ECCEEEEECCCCCCCCc
Confidence 2222222 56666666532 48899988775433211111 111111222 2566 455543
Q ss_pred ---CCcEEEEeCCCCeeEEE--eeccccCeEEEEEeCCCCEEEEEecC-----CeEEEEEccCCcccccCCCCCCCCcce
Q psy12614 223 ---GGFVRFWDGKTGVQWSD--VKTHKKDILALTVSEDENYLYCAGVD-----PTVVCFQRTRKPQVCSTSGPEQGSSVW 292 (708)
Q Consensus 223 ---dg~i~~wd~~~~~~~~~--~~~~~~~i~~~~~s~~~~~l~~~~~d-----g~i~iw~~~~~~~~~~~~g~~~~~~~~ 292 (708)
...+.+||..+.+-... +......- +++.. +++.++.|+.+ ..+.+||..+ ..|
T Consensus 165 ~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~-~~~~~-~~~i~v~GG~~~~~~~~~~~~yd~~~--------------~~W 228 (306)
T 3ii7_A 165 GRVLNSCEVYDPATETWTELCPMIEARKNH-GLVFV-KDKIFAVGGQNGLGGLDNVEYYDIKL--------------NEW 228 (306)
T ss_dssp CEECCCEEEEETTTTEEEEECCCSSCCBSC-EEEEE-TTEEEEECCEETTEEBCCEEEEETTT--------------TEE
T ss_pred ccccceEEEeCCCCCeEEECCCccchhhcc-eEEEE-CCEEEEEeCCCCCCCCceEEEeeCCC--------------CcE
Confidence 35588999987754322 22111111 22222 56666666653 3688888877 346
Q ss_pred EEeEEEeccccceEEEEEeCCEEEEEcCC-----CeEEEEeCCCCceeec
Q psy12614 293 VRSVNRVIHEGDVKSLALHGNRLYSGGLD-----SYLSLSYYPPKTLVKY 337 (708)
Q Consensus 293 ~~~~~~~~~~~~v~~l~~~~~~l~s~~~d-----~~i~iw~~~~~~~~~~ 337 (708)
.....+.........+.+.+..++.|+.+ ..+.+||+.+.....+
T Consensus 229 ~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~ 278 (306)
T 3ii7_A 229 KMVSPMPWKGVTVKCAAVGSIVYVLAGFQGVGRLGHILEYNTETDKWVAN 278 (306)
T ss_dssp EECCCCSCCBSCCEEEEETTEEEEEECBCSSSBCCEEEEEETTTTEEEEE
T ss_pred EECCCCCCCccceeEEEECCEEEEEeCcCCCeeeeeEEEEcCCCCeEEeC
Confidence 65544433333333333447777778754 4688899988774443
|
| >2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis} | Back alignment and structure |
|---|
Probab=97.57 E-value=0.012 Score=55.39 Aligned_cols=161 Identities=12% Similarity=0.126 Sum_probs=104.2
Q ss_pred CcEEEEEEe--CCEEEEE-cCCCcEEEEECCCCeEeEEEeec-----C--CceEEEEE---ecCCCEEEEEe--------
Q psy12614 72 NSIECLTWF--NDRLFSG-GLQGFVNEYDMRRLNIKSSTAVT-----S--GTCWCLSV---HKKKRLLAAGT-------- 130 (708)
Q Consensus 72 ~~v~~l~~~--~~~l~s~-~~d~~i~vwd~~~~~~~~~~~~~-----~--~~v~~~~~---s~~~~~la~~~-------- 130 (708)
.--.+++|. ...+..+ -..++|..||...+......... . ..+..+.+ .|+++++++..
T Consensus 13 ~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~ 92 (334)
T 2p9w_A 13 LTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFA 92 (334)
T ss_dssp CCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTT
T ss_pred cCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEccccccccc
Confidence 455678898 4555554 47999999999866443332211 1 14678999 68877777543
Q ss_pred -----CCCcEEEEEcc---CCcEEEEEeccccc-----------ccEEEEEECCCCCEEEEecCC--eEEEEEcCCCceE
Q psy12614 131 -----EQGHINLFQIS---DEGLLYEKLLDRQQ-----------GRILCTAWHSSGDYLVTGCAA--AVRVWDIHKGHAI 189 (708)
Q Consensus 131 -----~d~~i~iwd~~---~~~~~~~~~~~~~~-----------~~v~~~~~s~d~~~l~~~~~d--~i~iwd~~~~~~~ 189 (708)
.+..|..+|+. +++......+.... .....++..++|+.-++++.. .|...+.. |+.+
T Consensus 93 g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pd-G~~~ 171 (334)
T 2p9w_A 93 DQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSAD-GKTV 171 (334)
T ss_dssp SCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTT-SCCE
T ss_pred ccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCC-CCEE
Confidence 26779999999 77766545554322 348899999999988876654 55555543 3433
Q ss_pred EEEEecccCCCCCceeEEEEEEccCC-EEEEEcCCCcEEEEeCCCC
Q psy12614 190 HKMSLDKSSKFSKNTAVWCVAFCADF-TIITGDSGGFVRFWDGKTG 234 (708)
Q Consensus 190 ~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~~~~~dg~i~~wd~~~~ 234 (708)
..+....... ......+.|++.|+| .|++....|.|..+|+.+.
T Consensus 172 ~~~~~~~~~~-~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~p 216 (334)
T 2p9w_A 172 STFAWESGNG-GQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKP 216 (334)
T ss_dssp EEEEECCCCS-SSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSS
T ss_pred eeeeecCCCc-ccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCC
Confidence 3332221000 112346689999999 4777766999999998754
|
| >2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.55 E-value=0.02 Score=54.74 Aligned_cols=222 Identities=12% Similarity=0.118 Sum_probs=115.4
Q ss_pred CcEEEEECCCCeEeEEEeecCCce-EEEEEecCCCEEEEEeCC-----CcEEEEEccCCcEEEEEecccccccEEEEEEC
Q psy12614 91 GFVNEYDMRRLNIKSSTAVTSGTC-WCLSVHKKKRLLAAGTEQ-----GHINLFQISDEGLLYEKLLDRQQGRILCTAWH 164 (708)
Q Consensus 91 ~~i~vwd~~~~~~~~~~~~~~~~v-~~~~~s~~~~~la~~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s 164 (708)
..+..+|+.+.+-...-....... .+++ .-++..++.|+.+ ..+.+||..+.+......+......-..+.+
T Consensus 30 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~-~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~- 107 (302)
T 2xn4_A 30 RSVECYDFKEERWHQVAELPSRRCRAGMV-YMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAVL- 107 (302)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCBSCEEE-EETTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-
T ss_pred CcEEEEcCcCCcEeEcccCCcccccceEE-EECCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEEE-
Confidence 458888988865332211111111 1222 2266677777654 3588999998877543333222222222222
Q ss_pred CCCCEEEEecCC------eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcC-------CCcEEEEe
Q psy12614 165 SSGDYLVTGCAA------AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDS-------GGFVRFWD 230 (708)
Q Consensus 165 ~d~~~l~~~~~d------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~-------dg~i~~wd 230 (708)
+++.++.|+.+ .+.+||+.+.+-...-.... ...-.+++. -+++ ++.|+. ...+.+||
T Consensus 108 -~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~------~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd 179 (302)
T 2xn4_A 108 -NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNT------RRSSVGVGV-VGGLLYAVGGYDVASRQCLSTVECYN 179 (302)
T ss_dssp -TTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSS------CCBSCEEEE-ETTEEEEECCEETTTTEECCCEEEEE
T ss_pred -CCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCC------cccCceEEE-ECCEEEEEeCCCCCCCccccEEEEEe
Confidence 56666666532 47788887765433221111 111112222 2565 555543 24588999
Q ss_pred CCCCeeEEE--eeccccCeEEEEEeCCCCEEEEEecC-----CeEEEEEccCCcccccCCCCCCCCcceEEeEEEecccc
Q psy12614 231 GKTGVQWSD--VKTHKKDILALTVSEDENYLYCAGVD-----PTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEG 303 (708)
Q Consensus 231 ~~~~~~~~~--~~~~~~~i~~~~~s~~~~~l~~~~~d-----g~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 303 (708)
..+++-... +.........+. -+++.++.|+.+ ..+.+||..+ ..|.....+.....
T Consensus 180 ~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~--------------~~W~~~~~~~~~r~ 243 (302)
T 2xn4_A 180 ATTNEWTYIAEMSTRRSGAGVGV--LNNLLYAVGGHDGPLVRKSVEVYDPTT--------------NAWRQVADMNMCRR 243 (302)
T ss_dssp TTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECCBSSSSBCCCEEEEETTT--------------TEEEEECCCSSCCB
T ss_pred CCCCcEEECCCCccccccccEEE--ECCEEEEECCCCCCcccceEEEEeCCC--------------CCEeeCCCCCCccc
Confidence 987754332 222122222222 256677777654 3688898877 34655543332222
Q ss_pred ceEEEEEeCCEEEEEcCCC-----eEEEEeCCCCceeecC
Q psy12614 304 DVKSLALHGNRLYSGGLDS-----YLSLSYYPPKTLVKYP 338 (708)
Q Consensus 304 ~v~~l~~~~~~l~s~~~d~-----~i~iw~~~~~~~~~~~ 338 (708)
....+.+.+..++.|+.++ .+.+||+.+.....+.
T Consensus 244 ~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~ 283 (302)
T 2xn4_A 244 NAGVCAVNGLLYVVGGDDGSCNLASVEYYNPTTDKWTVVS 283 (302)
T ss_dssp SCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEECS
T ss_pred cCeEEEECCEEEEECCcCCCcccccEEEEcCCCCeEEECC
Confidence 2222333366777777653 4889999888766654
|
| >2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.41 E-value=0.032 Score=53.22 Aligned_cols=225 Identities=13% Similarity=0.125 Sum_probs=114.1
Q ss_pred CCEEEEEeCC----CcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe-CCEEEEEcCC-----CcEEEEECCCCeEeEEE
Q psy12614 38 SSRLAVSRAD----QSIEIWDISETPHVDRVFIGDPLSNSIECLTWF-NDRLFSGGLQ-----GFVNEYDMRRLNIKSST 107 (708)
Q Consensus 38 ~~~la~~~~d----g~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~-~~~l~s~~~d-----~~i~vwd~~~~~~~~~~ 107 (708)
+.+++.|+.+ ..+..||+.+++... +..-.....-.+++.. +..++.|+.+ ..+.+||..+.+-...-
T Consensus 16 ~~i~v~GG~~~~~~~~~~~~d~~~~~W~~--~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~ 93 (302)
T 2xn4_A 16 KLMVVVGGQAPKAIRSVECYDFKEERWHQ--VAELPSRRCRAGMVYMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVA 93 (302)
T ss_dssp EEEEEECCBSSSBCCCEEEEETTTTEEEE--ECCCSSCCBSCEEEEETTEEEEESCBCSSSBCCCEEEEETTTTEEEEEC
T ss_pred CEEEEECCCCCCCCCcEEEEcCcCCcEeE--cccCCcccccceEEEECCEEEEEeCcCCCccccceEEECCCCCceeeCC
Confidence 4455566543 368899998865432 2211100111223333 5566666654 35889998887533221
Q ss_pred eecCCceEEEEEecCCCEEEEEeCCC-----cEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecC-------
Q psy12614 108 AVTSGTCWCLSVHKKKRLLAAGTEQG-----HINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCA------- 175 (708)
Q Consensus 108 ~~~~~~v~~~~~s~~~~~la~~~~d~-----~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~------- 175 (708)
..........+..-++..++.|+.++ .+.+||..+.+......+.........+.+ +++.++.|+.
T Consensus 94 ~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~ 171 (302)
T 2xn4_A 94 NMRDRRSTLGAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVV--GGLLYAVGGYDVASRQC 171 (302)
T ss_dssp CCSSCCBSCEEEEETTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEETTTTEE
T ss_pred CCCccccceEEEEECCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEE--CCEEEEEeCCCCCCCcc
Confidence 11111111111222667777777553 578899988877543333222222222222 5666666653
Q ss_pred C-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCC-----CcEEEEeCCCCeeEEE--eeccccC
Q psy12614 176 A-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSG-----GFVRFWDGKTGVQWSD--VKTHKKD 246 (708)
Q Consensus 176 d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~d-----g~i~~wd~~~~~~~~~--~~~~~~~ 246 (708)
- .+.+||+.+.+-...-.... ...-.+++.. +++ ++.|+.+ ..+.+||..+++-... +......
T Consensus 172 ~~~~~~yd~~~~~W~~~~~~p~------~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~ 244 (302)
T 2xn4_A 172 LSTVECYNATTNEWTYIAEMST------RRSGAGVGVL-NNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRN 244 (302)
T ss_dssp CCCEEEEETTTTEEEEECCCSS------CCBSCEEEEE-TTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBS
T ss_pred ccEEEEEeCCCCcEEECCCCcc------ccccccEEEE-CCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCcccc
Confidence 2 58899988765433221111 1111122222 555 5566553 4689999987654322 2211111
Q ss_pred eEEEEEeCCCCEEEEEecCC-----eEEEEEccC
Q psy12614 247 ILALTVSEDENYLYCAGVDP-----TVVCFQRTR 275 (708)
Q Consensus 247 i~~~~~s~~~~~l~~~~~dg-----~i~iw~~~~ 275 (708)
.. ++. -+++.++.|+.++ .+.+||..+
T Consensus 245 ~~-~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~ 276 (302)
T 2xn4_A 245 AG-VCA-VNGLLYVVGGDDGSCNLASVEYYNPTT 276 (302)
T ss_dssp CE-EEE-ETTEEEEECCBCSSSBCCCEEEEETTT
T ss_pred Ce-EEE-ECCEEEEECCcCCCcccccEEEEcCCC
Confidence 12 222 2666777777653 488898877
|
| >4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.37 E-value=0.035 Score=53.35 Aligned_cols=227 Identities=15% Similarity=0.015 Sum_probs=118.0
Q ss_pred EEEEcCCCcEEEEECCCCeEeE-EEeecCCceEEEEEecCCCEEEEEeC-----C------CcEEEEEccCCcEEEEEec
Q psy12614 84 LFSGGLQGFVNEYDMRRLNIKS-STAVTSGTCWCLSVHKKKRLLAAGTE-----Q------GHINLFQISDEGLLYEKLL 151 (708)
Q Consensus 84 l~s~~~d~~i~vwd~~~~~~~~-~~~~~~~~v~~~~~s~~~~~la~~~~-----d------~~i~iwd~~~~~~~~~~~~ 151 (708)
++.|+ ..+.+||..+++-.. .+..........+...++..++.|+. . ..+.+||..+++......+
T Consensus 8 ~~~GG--~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~ 85 (315)
T 4asc_A 8 FMISE--EGAVAYDPAANECYCASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPL 85 (315)
T ss_dssp EEEET--TEEEEEETTTTEEEEEECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCB
T ss_pred EEEcC--CceEEECCCCCeEecCCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCC
Confidence 34444 578999999887432 11111123333444557778888773 1 1278889888876422222
Q ss_pred ccccccEEEEEECCCCCEEEEecC---------CeEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEc
Q psy12614 152 DRQQGRILCTAWHSSGDYLVTGCA---------AAVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGD 221 (708)
Q Consensus 152 ~~~~~~v~~~~~s~d~~~l~~~~~---------d~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~ 221 (708)
......-..+.+ ++..++.|+. +.+.+||..+.+-...-..+. ...-.+++. -+++ ++.|+
T Consensus 86 p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~------~r~~~~~~~-~~~~iyv~GG 156 (315)
T 4asc_A 86 PSPRCLFGLGEA--LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPY------VVYGHTVLS-HMDLVYVIGG 156 (315)
T ss_dssp SSCEESCEEEEE--TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSS------CCBSCEEEE-ETTEEEEECC
T ss_pred CcchhceeEEEE--CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCC------cccceeEEE-ECCEEEEEeC
Confidence 211111112222 5566666662 158899988765332211111 111112222 3555 55665
Q ss_pred C-C-----CcEEEEeCCCCeeEEE--eeccccCeEEEEEeCCCCEEEEEecCC-----eEEEEEccCCcccccCCCCCCC
Q psy12614 222 S-G-----GFVRFWDGKTGVQWSD--VKTHKKDILALTVSEDENYLYCAGVDP-----TVVCFQRTRKPQVCSTSGPEQG 288 (708)
Q Consensus 222 ~-d-----g~i~~wd~~~~~~~~~--~~~~~~~i~~~~~s~~~~~l~~~~~dg-----~i~iw~~~~~~~~~~~~g~~~~ 288 (708)
. + ..+.+||..+.+-... +......-.++. -+++.++.|+.++ .+.+||..+
T Consensus 157 ~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~------------- 221 (315)
T 4asc_A 157 KGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATV--HDGRIIVAAGVTDTGLTSSAEVYSITD------------- 221 (315)
T ss_dssp BCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEEEEECSSSEEEEEEEEETTT-------------
T ss_pred CCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEE--ECCEEEEEeccCCCCccceEEEEECCC-------------
Confidence 4 2 4689999887653322 221111222222 2666777777654 578888877
Q ss_pred CcceEEeEEEeccccceEEEEEeCCEEEEEcCCC--------------eEEEEeCCCCceeec
Q psy12614 289 SSVWVRSVNRVIHEGDVKSLALHGNRLYSGGLDS--------------YLSLSYYPPKTLVKY 337 (708)
Q Consensus 289 ~~~~~~~~~~~~~~~~v~~l~~~~~~l~s~~~d~--------------~i~iw~~~~~~~~~~ 337 (708)
..|.....+.........+.+.+.+++.|+.++ .+.+||+.+.....+
T Consensus 222 -~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~ 283 (315)
T 4asc_A 222 -NKWAPFEAFPQERSSLSLVSLVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKWEGV 283 (315)
T ss_dssp -TEEEEECCCSSCCBSCEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEEEEE
T ss_pred -CeEEECCCCCCcccceeEEEECCEEEEECCccccCcCCccccccccCcEEEecCCCChhhhh
Confidence 356655443322222333333366777777542 366788877765444
|
| >2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12} | Back alignment and structure |
|---|
Probab=97.37 E-value=0.12 Score=50.32 Aligned_cols=151 Identities=11% Similarity=0.038 Sum_probs=80.6
Q ss_pred CceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEE-EEec----ccccccEEEEEECCC---CCEEEEec-C-------
Q psy12614 112 GTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLY-EKLL----DRQQGRILCTAWHSS---GDYLVTGC-A------- 175 (708)
Q Consensus 112 ~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~-~~~~----~~~~~~v~~~~~s~d---~~~l~~~~-~------- 175 (708)
...+.|+|.|+|+.|.++...|.|++++.. +.... ...+ ....+....++|+|+ +..|+.+. .
T Consensus 18 ~~P~~i~~~pdG~~l~V~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~ 96 (353)
T 2g8s_A 18 DHPWALAFLPDNHGMLITLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKA 96 (353)
T ss_dssp SSEEEEEECSTTCCEEEEETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCE
T ss_pred CCcEEEEEcCCCCEEEEEeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCc
Confidence 457899999999844455678999999853 33210 0111 122345789999996 55555442 2
Q ss_pred C-eEEEEEcCCC--c--eEEEEEecccCCCCCceeEEEEEEccCCEEEEEcCC--------------CcEEEEeCCCCe-
Q psy12614 176 A-AVRVWDIHKG--H--AIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSG--------------GFVRFWDGKTGV- 235 (708)
Q Consensus 176 d-~i~iwd~~~~--~--~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d--------------g~i~~wd~~~~~- 235 (708)
. .|..+++..+ . ....+................++|.|||.|..+..+ |.|.-++....-
T Consensus 97 ~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p 176 (353)
T 2g8s_A 97 GTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEIP 176 (353)
T ss_dssp EEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCCC
T ss_pred eeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCCC
Confidence 3 5777776543 1 112221110000000122357999999985444322 467777764210
Q ss_pred -----------eEEEe-eccccCeEEEEEeCCCCEEEEEec
Q psy12614 236 -----------QWSDV-KTHKKDILALTVSEDENYLYCAGV 264 (708)
Q Consensus 236 -----------~~~~~-~~~~~~i~~~~~s~~~~~l~~~~~ 264 (708)
....+ .++ .....++|+|+...|+++..
T Consensus 177 ~~npf~~~~~~~~~i~a~G~-rnp~gl~~d~~~g~l~~~d~ 216 (353)
T 2g8s_A 177 DDNPFIKESGVRAEIWSYGI-RNPQGMAMNPWSNALWLNEH 216 (353)
T ss_dssp TTCTTTTSTTSCTTEEEECC-SEEEEEEEETTTTEEEEEEE
T ss_pred CCCCCcCCCCCCccEEEEcC-cCccceEEECCCCCEEEEec
Confidence 11111 122 34678999994445555543
|
| >1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A | Back alignment and structure |
|---|
Probab=97.37 E-value=0.00078 Score=72.69 Aligned_cols=217 Identities=8% Similarity=-0.051 Sum_probs=125.1
Q ss_pred CCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC--eEEEEEcCCC---ceEEEEEecccCCCCCcee
Q psy12614 131 EQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA--AVRVWDIHKG---HAIHKMSLDKSSKFSKNTA 205 (708)
Q Consensus 131 ~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d--~i~iwd~~~~---~~~~~~~~~~~~~~~~~~~ 205 (708)
..+.|+..++.+.+.. ..+ .....+..++|.+.+..|+.+... .|..+++... .....+... ....
T Consensus 384 ~~~~I~~id~~~~~~~--~~~-~~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~------~~~~ 454 (699)
T 1n7d_A 384 NRHEVRKMTLDRSEYT--SLI-PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISR------DIQA 454 (699)
T ss_dssp CTTC-CEECTTSCCEE--CCS-CCCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCS------CC--
T ss_pred CccceEEEeCCCCcce--eee-ccCcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeC------CCCC
Confidence 3457888888877664 222 233456789999988777776544 8999998651 111111100 0223
Q ss_pred EEEEEEccC-CEEE-EEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEec--CCeEEEEEccCCccccc
Q psy12614 206 VWCVAFCAD-FTII-TGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGV--DPTVVCFQRTRKPQVCS 281 (708)
Q Consensus 206 v~~~~~~~~-~~l~-~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~--dg~i~iw~~~~~~~~~~ 281 (708)
...+++.+. ++|+ +-...+.|.++++........+.........++++|.+.+|+.+.. .+.|..+++..
T Consensus 455 P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG------ 528 (699)
T 1n7d_A 455 PDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG------ 528 (699)
T ss_dssp CCCEECCCSSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSS------
T ss_pred cceEEEEeeCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCC------
Confidence 456777754 4544 4445688999998754443333333345678899997766665543 26777777654
Q ss_pred CCCCCCCCcceEEeEEEeccccceEEEEEe---CCEEEEEcCCCeEEEEeCCCCceeecCc---cCCCCceEEEEcCCcE
Q psy12614 282 TSGPEQGSSVWVRSVNRVIHEGDVKSLALH---GNRLYSGGLDSYLSLSYYPPKTLVKYPC---TLAQSTPVSLAKDIQH 355 (708)
Q Consensus 282 ~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~---~~~l~s~~~d~~i~iw~~~~~~~~~~~~---~~~~~~~~~~s~~~~~ 355 (708)
.. ........-.....|+++ +.++++-+..+.|..+++.+...+.+.. ....+..+++..+ .+
T Consensus 529 --~~--------~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~-~l 597 (699)
T 1n7d_A 529 --VD--------IYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED-KV 597 (699)
T ss_dssp --CC--------CCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETT-EE
T ss_pred --CC--------eeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceEeEEECC-EE
Confidence 11 001111112345678887 4566666677899999998755444331 2344556776654 33
Q ss_pred EEE-EcCCeEEEEEecCCC
Q psy12614 356 VLL-QYTSHLELWSLGSAQ 373 (708)
Q Consensus 356 l~~-~~~~~i~i~~~~~~~ 373 (708)
+++ ...+.|..++..++.
T Consensus 598 ywtd~~~~~V~~~d~~~G~ 616 (699)
T 1n7d_A 598 FWTDIINEAIFSANRLTGS 616 (699)
T ss_dssp EEECSTTTCEEEEETTTEE
T ss_pred EEEeCCCCeEEEEEccCCC
Confidence 333 356778888765543
|
| >1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A | Back alignment and structure |
|---|
Probab=97.30 E-value=0.031 Score=53.56 Aligned_cols=231 Identities=11% Similarity=0.058 Sum_probs=118.4
Q ss_pred CCEEEEEcC----CCcEEEEECCCCeEeEEEeecCCce-EEEEEecCCCEEEEEeC----C-----CcEEEEEccCCcEE
Q psy12614 81 NDRLFSGGL----QGFVNEYDMRRLNIKSSTAVTSGTC-WCLSVHKKKRLLAAGTE----Q-----GHINLFQISDEGLL 146 (708)
Q Consensus 81 ~~~l~s~~~----d~~i~vwd~~~~~~~~~~~~~~~~v-~~~~~s~~~~~la~~~~----d-----~~i~iwd~~~~~~~ 146 (708)
+..++.|+. -..+.++|..+.+-...-....... .+++ .-++..++.|+. + ..+.+||..+.+..
T Consensus 25 ~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~-~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~ 103 (308)
T 1zgk_A 25 RLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVPRSGLAGC-VVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWS 103 (308)
T ss_dssp CCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEE-EETTEEEEECCEEEETTEEEECCCEEEEETTTTEEE
T ss_pred CEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCcccccceEE-EECCEEEEECCCcCCCCCCeecceEEEECCCCCeEe
Confidence 455555653 2468889988865332211111111 1222 225666666665 2 46889999888765
Q ss_pred EEEecccccccEEEEEECCCCCEEEEecC------CeEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEE
Q psy12614 147 YEKLLDRQQGRILCTAWHSSGDYLVTGCA------AAVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IIT 219 (708)
Q Consensus 147 ~~~~~~~~~~~v~~~~~s~d~~~l~~~~~------d~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~ 219 (708)
....+......-..+.+ +++.++.|+. +.+.+||..+.+-...-.... . ...- +++.. +++ ++.
T Consensus 104 ~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~-~----r~~~-~~~~~-~~~iyv~ 174 (308)
T 1zgk_A 104 PCAPMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLT-R----RIGV-GVAVL-NRLLYAV 174 (308)
T ss_dssp ECCCCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSS-C----CBSC-EEEEE-TTEEEEE
T ss_pred ECCCCCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCc-c----ccce-EEEEE-CCEEEEE
Confidence 32222221122222222 5666666653 258889988765433211111 0 1111 12222 565 555
Q ss_pred EcCC-----CcEEEEeCCCCeeEEE--eeccccCeEEEEEeCCCCEEEEEecC-----CeEEEEEccCCcccccCCCCCC
Q psy12614 220 GDSG-----GFVRFWDGKTGVQWSD--VKTHKKDILALTVSEDENYLYCAGVD-----PTVVCFQRTRKPQVCSTSGPEQ 287 (708)
Q Consensus 220 ~~~d-----g~i~~wd~~~~~~~~~--~~~~~~~i~~~~~s~~~~~l~~~~~d-----g~i~iw~~~~~~~~~~~~g~~~ 287 (708)
|+.+ ..+.+||+.+.+-... +.........+.+ +++.++.|+.+ ..+.+||+.+
T Consensus 175 GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~------------ 240 (308)
T 1zgk_A 175 GGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVET------------ 240 (308)
T ss_dssp CCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTT------------
T ss_pred eCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCC------------
Confidence 5543 4689999887654322 2211122222222 56667777654 4688999877
Q ss_pred CCcceEEeEEEeccccceEEEEEeCCEEEEEcCC-----CeEEEEeCCCCceeec
Q psy12614 288 GSSVWVRSVNRVIHEGDVKSLALHGNRLYSGGLD-----SYLSLSYYPPKTLVKY 337 (708)
Q Consensus 288 ~~~~~~~~~~~~~~~~~v~~l~~~~~~l~s~~~d-----~~i~iw~~~~~~~~~~ 337 (708)
..|.....+.........+...+.+++.|+.+ ..+.+||+.+.....+
T Consensus 241 --~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~ 293 (308)
T 1zgk_A 241 --ETWTFVAPMKHRRSALGITVHQGRIYVLGGYDGHTFLDSVECYDPDTDTWSEV 293 (308)
T ss_dssp --TEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEEEE
T ss_pred --CcEEECCCCCCCccceEEEEECCEEEEEcCcCCCcccceEEEEcCCCCEEeec
Confidence 34655543332222222333336666777654 3577888887765544
|
| >1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A | Back alignment and structure |
|---|
Probab=97.25 E-value=0.032 Score=53.41 Aligned_cols=228 Identities=10% Similarity=0.032 Sum_probs=116.1
Q ss_pred EcCCCCEEEEEeCC----CcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe-CCEEEEEcC----C-----CcEEEEECC
Q psy12614 34 CEPKSSRLAVSRAD----QSIEIWDISETPHVDRVFIGDPLSNSIECLTWF-NDRLFSGGL----Q-----GFVNEYDMR 99 (708)
Q Consensus 34 ~s~~~~~la~~~~d----g~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~-~~~l~s~~~----d-----~~i~vwd~~ 99 (708)
..-++.+++.|+.+ ..+.+||..+++... +..-.....-.+++.. +..++.|+. + ..+.++|..
T Consensus 21 ~~~~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~--~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~ 98 (308)
T 1zgk_A 21 PKVGRLIYTAGGYFRQSLSYLEAYNPSNGTWLR--LADLQVPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPM 98 (308)
T ss_dssp CCCCCCEEEECCBSSSBCCCEEEEETTTTEEEE--CCCCSSCCBSCEEEEETTEEEEECCEEEETTEEEECCCEEEEETT
T ss_pred cCCCCEEEEEeCcCCCCcceEEEEcCCCCeEeE--CCCCCcccccceEEEECCEEEEECCCcCCCCCCeecceEEEECCC
Confidence 34466777777632 368999998876432 2211100111223333 555566665 2 468889988
Q ss_pred CCeEeEEEeecCCce-EEEEEecCCCEEEEEeCC-----CcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEe
Q psy12614 100 RLNIKSSTAVTSGTC-WCLSVHKKKRLLAAGTEQ-----GHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTG 173 (708)
Q Consensus 100 ~~~~~~~~~~~~~~v-~~~~~s~~~~~la~~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~ 173 (708)
+.+-...-....... .+++. -+++.++.|+.+ ..+.+||..+.+......+......-..+.+ +++.++.|
T Consensus 99 ~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~G 175 (308)
T 1zgk_A 99 TNQWSPCAPMSVPRNRIGVGV-IDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL--NRLLYAVG 175 (308)
T ss_dssp TTEEEECCCCSSCCBTCEEEE-ETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEEC
T ss_pred CCeEeECCCCCcCccccEEEE-ECCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE--CCEEEEEe
Confidence 865322111111111 11222 266677776543 4688999988876532222221122222233 56666666
Q ss_pred cCC------eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCC-----CcEEEEeCCCCeeEEE--
Q psy12614 174 CAA------AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSG-----GFVRFWDGKTGVQWSD-- 239 (708)
Q Consensus 174 ~~d------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~d-----g~i~~wd~~~~~~~~~-- 239 (708)
+.+ .+.+||+.+.+-...-.... ...-.+++.. +++ ++.|+.+ ..+.+||+.+.+-...
T Consensus 176 G~~~~~~~~~~~~yd~~~~~W~~~~~~p~------~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~ 248 (308)
T 1zgk_A 176 GFDGTNRLNSAECYYPERNEWRMITAMNT------IRSGAGVCVL-HNCIYAAGGYDGQDQLNSVERYDVETETWTFVAP 248 (308)
T ss_dssp CBCSSCBCCCEEEEETTTTEEEECCCCSS------CCBSCEEEEE-TTEEEEECCBCSSSBCCCEEEEETTTTEEEECCC
T ss_pred CCCCCCcCceEEEEeCCCCeEeeCCCCCC------ccccceEEEE-CCEEEEEeCCCCCCccceEEEEeCCCCcEEECCC
Confidence 542 58899987765432211111 1111122222 565 5566554 5699999987754332
Q ss_pred eeccccCeEEEEEeCCCCEEEEEecC-----CeEEEEEccC
Q psy12614 240 VKTHKKDILALTVSEDENYLYCAGVD-----PTVVCFQRTR 275 (708)
Q Consensus 240 ~~~~~~~i~~~~~s~~~~~l~~~~~d-----g~i~iw~~~~ 275 (708)
+........ ++. -+++.++.|+.+ ..+.+||..+
T Consensus 249 ~p~~r~~~~-~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~ 287 (308)
T 1zgk_A 249 MKHRRSALG-ITV-HQGRIYVLGGYDGHTFLDSVECYDPDT 287 (308)
T ss_dssp CSSCCBSCE-EEE-ETTEEEEECCBCSSCBCCEEEEEETTT
T ss_pred CCCCccceE-EEE-ECCEEEEEcCcCCCcccceEEEEcCCC
Confidence 221112222 222 256677777654 4578888877
|
| >1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1 | Back alignment and structure |
|---|
Probab=97.22 E-value=0.18 Score=49.14 Aligned_cols=211 Identities=10% Similarity=0.119 Sum_probs=136.3
Q ss_pred CCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCCeEEEEEcCCCceEEEEEecccCCCCCceeEEEEEE
Q psy12614 132 QGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAAAVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAF 211 (708)
Q Consensus 132 d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 211 (708)
+.+|.|.|+.++..+.++.... -+.-.+|..+.||.-...++.++|+++...+...... + .|.-=.|
T Consensus 47 ~~~vvIiDl~~~~~~~rrpi~A-----dsAIMnP~~~iiALrag~~lQiFnle~K~klks~~~~-------e-~VvfWkW 113 (494)
T 1bpo_A 47 QAQVVIIDMNDPSNPIRRPISA-----DSAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTMT-------D-DVTFWKW 113 (494)
T ss_dssp CCEEEEEETTSTTSCEEEECCC-----SEEEECSSSSCEEEEETTEEEEEETTTTEEEEEEECS-------S-CCCEEEE
T ss_pred CCeEEEEECCCCCcceeccccc-----ceeeeCCCCcEEEEecCCeEEEEchHHhhhhcceecC-------C-CceEEEe
Confidence 4478899998876553344432 2345678888888776459999999999998888764 2 3333455
Q ss_pred ccCCEEEEEcCCCcEEEEeCCCC-eeEEEeecc----ccCeEEEEEeCCCCEEEEEec-------CCeEEEEEccCCccc
Q psy12614 212 CADFTIITGDSGGFVRFWDGKTG-VQWSDVKTH----KKDILALTVSEDENYLYCAGV-------DPTVVCFQRTRKPQV 279 (708)
Q Consensus 212 ~~~~~l~~~~~dg~i~~wd~~~~-~~~~~~~~~----~~~i~~~~~s~~~~~l~~~~~-------dg~i~iw~~~~~~~~ 279 (708)
..+..++..+ +..|+-|++... .+.+.+.-| ...|.....+++.++++..+- .|.+.+|..+.
T Consensus 114 is~~~l~lVT-~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er---- 188 (494)
T 1bpo_A 114 ISLNTVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR---- 188 (494)
T ss_dssp EETTEEEEEC-SSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTT----
T ss_pred cCCCeEEEEc-CCeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccc----
Confidence 5566554444 457999998643 445555433 357788888999999875442 47899999987
Q ss_pred ccCCCCCCCCcceEEeEEEeccccceEEEEEeC-----CEEEEEcC---CCeEEEEeCCCCc---------eeecC-cc-
Q psy12614 280 CSTSGPEQGSSVWVRSVNRVIHEGDVKSLALHG-----NRLYSGGL---DSYLSLSYYPPKT---------LVKYP-CT- 340 (708)
Q Consensus 280 ~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~~-----~~l~s~~~---d~~i~iw~~~~~~---------~~~~~-~~- 340 (708)
+ ....+.+|......+...| ..++.+.. .+.+.+-++.... ...+. .+
T Consensus 189 ----~---------~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe 255 (494)
T 1bpo_A 189 ----K---------VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPE 255 (494)
T ss_dssp ----C---------CEEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTT
T ss_pred ----c---------ccchheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcc
Confidence 4 3566777766655554442 23333333 2688888885431 11111 01
Q ss_pred --CCCCceEEEEcCCcEEEE-EcCCeEEEEEecCCC
Q psy12614 341 --LAQSTPVSLAKDIQHVLL-QYTSHLELWSLGSAQ 373 (708)
Q Consensus 341 --~~~~~~~~~s~~~~~l~~-~~~~~i~i~~~~~~~ 373 (708)
..-+-++.+|+.-.++.. ..-|.+++||++++.
T Consensus 256 ~~~DFPvamqvs~kygviyviTK~G~i~lyDleTgt 291 (494)
T 1bpo_A 256 AQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGT 291 (494)
T ss_dssp STTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCC
T ss_pred cccCceeEEEecccCCEEEEEecCceEEEEecccce
Confidence 112235677777666655 789999999999977
|
| >4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.18 E-value=0.078 Score=50.89 Aligned_cols=208 Identities=7% Similarity=-0.003 Sum_probs=109.1
Q ss_pred EEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecC--------C----eEEEEEcCCCceEEEEE
Q psy12614 126 LAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCA--------A----AVRVWDIHKGHAIHKMS 193 (708)
Q Consensus 126 la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~--------d----~i~iwd~~~~~~~~~~~ 193 (708)
++.|+ ..+.+||..+++... ..+.....+....+...++..++.|+. . .+.+||..+++-...-.
T Consensus 8 ~~~GG--~~~~~yd~~~~~W~~-~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~ 84 (315)
T 4asc_A 8 FMISE--EGAVAYDPAANECYC-ASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPP 84 (315)
T ss_dssp EEEET--TEEEEEETTTTEEEE-EECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCC
T ss_pred EEEcC--CceEEECCCCCeEec-CCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCC
Confidence 44454 579999999988753 333222222333333457777777773 1 27788888765432211
Q ss_pred ecccCCCCCceeEEEEEEccCCE-EEEEcCC--------CcEEEEeCCCCeeEEE--eeccccCeEEEEEeCCCCEEEEE
Q psy12614 194 LDKSSKFSKNTAVWCVAFCADFT-IITGDSG--------GFVRFWDGKTGVQWSD--VKTHKKDILALTVSEDENYLYCA 262 (708)
Q Consensus 194 ~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~d--------g~i~~wd~~~~~~~~~--~~~~~~~i~~~~~s~~~~~l~~~ 262 (708)
.+. ...-.+++.. +++ ++.|+.+ ..+.+||..+++-... ++.....- +++. -+++.++.|
T Consensus 85 ~p~------~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~-~~~~iyv~G 155 (315)
T 4asc_A 85 LPS------PRCLFGLGEA-LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGH-TVLS-HMDLVYVIG 155 (315)
T ss_dssp BSS------CEESCEEEEE-TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSC-EEEE-ETTEEEEEC
T ss_pred CCc------chhceeEEEE-CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccce-eEEE-ECCEEEEEe
Confidence 110 1111122222 555 5555532 4689999987753222 22111121 2222 355666677
Q ss_pred ec-C-----CeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEeCCEEEEEcCCC-----eEEEEeCCC
Q psy12614 263 GV-D-----PTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALHGNRLYSGGLDS-----YLSLSYYPP 331 (708)
Q Consensus 263 ~~-d-----g~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~s~~~d~-----~i~iw~~~~ 331 (708)
+. + ..+.+||..+ ..|.....+......-.++.+.+..++.|+.++ .+.+||+.+
T Consensus 156 G~~~~~~~~~~~~~yd~~~--------------~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~ 221 (315)
T 4asc_A 156 GKGSDRKCLNKMCVYDPKK--------------FEWKELAPMQTARSLFGATVHDGRIIVAAGVTDTGLTSSAEVYSITD 221 (315)
T ss_dssp CBCTTSCBCCCEEEEETTT--------------TEEEECCCCSSCCBSCEEEEETTEEEEEEEECSSSEEEEEEEEETTT
T ss_pred CCCCCCcccceEEEEeCCC--------------CeEEECCCCCCchhceEEEEECCEEEEEeccCCCCccceEEEEECCC
Confidence 65 2 4688888877 346555433322222233333477777777654 588899988
Q ss_pred CceeecCc-cCCCCceEEEEcCCcEEEEE
Q psy12614 332 KTLVKYPC-TLAQSTPVSLAKDIQHVLLQ 359 (708)
Q Consensus 332 ~~~~~~~~-~~~~~~~~~~s~~~~~l~~~ 359 (708)
.....+.. +.+.....+..-++++++.+
T Consensus 222 ~~W~~~~~~p~~r~~~~~~~~~~~l~v~G 250 (315)
T 4asc_A 222 NKWAPFEAFPQERSSLSLVSLVGTLYAIG 250 (315)
T ss_dssp TEEEEECCCSSCCBSCEEEEETTEEEEEE
T ss_pred CeEEECCCCCCcccceeEEEECCEEEEEC
Confidence 87665552 12222223334466666654
|
| >3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A* | Back alignment and structure |
|---|
Probab=97.12 E-value=0.23 Score=48.38 Aligned_cols=245 Identities=9% Similarity=0.024 Sum_probs=123.9
Q ss_pred ceeEEEEEEccCCEEEEEcCCCcEEEEeCCCCe-eEEEee---ccccCeEEEEEeCC---CCEEEEEec----C----Ce
Q psy12614 203 NTAVWCVAFCADFTIITGDSGGFVRFWDGKTGV-QWSDVK---THKKDILALTVSED---ENYLYCAGV----D----PT 267 (708)
Q Consensus 203 ~~~v~~~~~~~~~~l~~~~~dg~i~~wd~~~~~-~~~~~~---~~~~~i~~~~~s~~---~~~l~~~~~----d----g~ 267 (708)
-...+.++|.|||+++++..+|.|++++ .+++ .+..+. ........++++|+ +..|+++.. + +.
T Consensus 28 l~~P~~ia~~pdG~l~V~e~~g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~ 106 (354)
T 3a9g_A 28 LEVPWSIAPLGGGRYLVTERPGRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNR 106 (354)
T ss_dssp CSCEEEEEEEETTEEEEEETTTEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEE
T ss_pred CCCCeEEEEcCCCeEEEEeCCCEEEEEe-CCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceE
Confidence 3457899999999988888889999997 4555 222221 12356789999998 556665543 2 56
Q ss_pred EEEEEccCCcccccCCCCCCCCcceEE-eEEEe-ccccceEEEEEe--CCEEEEEcC-------------CCeEEEEeCC
Q psy12614 268 VVCFQRTRKPQVCSTSGPEQGSSVWVR-SVNRV-IHEGDVKSLALH--GNRLYSGGL-------------DSYLSLSYYP 330 (708)
Q Consensus 268 i~iw~~~~~~~~~~~~g~~~~~~~~~~-~~~~~-~~~~~v~~l~~~--~~~l~s~~~-------------d~~i~iw~~~ 330 (708)
|..|+... +.. ....... ...+. ...+....|+|. +.++++.+. .+.|..++.+
T Consensus 107 v~r~~~~~--------~~~-~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~d 177 (354)
T 3a9g_A 107 VIRGRLDG--------STF-KLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEE 177 (354)
T ss_dssp EEEEEECS--------SSC-CEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTT
T ss_pred EEEEEECC--------CCc-CcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCC
Confidence 77777665 210 0000001 11122 112234567887 655555332 2455555554
Q ss_pred CCc--------eeecCccCCCCceEEEEc-CCcEEEEEcCC----eEEEEEecCCCC---CCCCCCC--CCCcccCCCCc
Q psy12614 331 PKT--------LVKYPCTLAQSTPVSLAK-DIQHVLLQYTS----HLELWSLGSAQS---TDLSSHS--NTTGVPLLSFP 392 (708)
Q Consensus 331 ~~~--------~~~~~~~~~~~~~~~~s~-~~~~l~~~~~~----~i~i~~~~~~~~---~~~~~~~--~~~~~~~~~~~ 392 (708)
... ...+......+..++++| ++++.++.... .|.+. ..+.. ....+.. .... .+
T Consensus 178 G~~p~~npf~~~~i~a~G~rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i--~~G~nyGwp~~~g~~~~~~~~-----~p 250 (354)
T 3a9g_A 178 GRPPADNPFPNSPIWSYGHRNPQGIDWHRASGVMVATEHGPVGHDEVNII--LKGGNYGWPLATGKAGRGEFV-----DP 250 (354)
T ss_dssp SCCCTTSSSTTCCEEEECCSCCCEEEECTTTCCEEEEECCSSSCCEEEEE--CTTCBCCTTTCCSCCCCTTSC-----CC
T ss_pred CCCCCCCCCCCCcEEEEccCCcceEEEeCCCCCEEEEecCCCCCcEEEEe--cCCCcCCCCcccCCCCCCCCc-----CC
Confidence 431 111111233556799999 67777764221 23332 22221 0000100 0000 00
Q ss_pred eEEEEEEecCCCceEEEEeC-------CCCcEEEEEc-CCceEEEEEEecCCcceeEEeecCCcccccceeEEEEEecCC
Q psy12614 393 RLIVKMSAVNNATIRCSVVS-------NDGKYVAYST-ESCVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVLISADS 464 (708)
Q Consensus 393 ~~~~~~~~~~~~~i~~~~~s-------~~g~~l~~~~-d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~ 464 (708)
+... .........++|. .+|.++++.. .+.|...++...........+ +.+. ...+..+++.|||
T Consensus 251 --~~~~-~~~~~ap~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~--~~~~--~~rp~~v~~~pDG 323 (354)
T 3a9g_A 251 --VIDT-GSETWAPSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTF--FKNV--FGRLRDVVIDDDG 323 (354)
T ss_dssp --SEEC-TTCCCCEEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEE--CTTT--SCCEEEEEECTTS
T ss_pred --Eeec-CCCCcCCcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeee--ccCC--CCCeeEEEECCCC
Confidence 0110 0112345677773 5676666644 667777776642111111221 2221 2256679999999
Q ss_pred CeEEEEe
Q psy12614 465 TLLLAVS 471 (708)
Q Consensus 465 ~~l~~~~ 471 (708)
.+.++..
T Consensus 324 ~lyv~~~ 330 (354)
T 3a9g_A 324 GILISTS 330 (354)
T ss_dssp CEEEEEC
T ss_pred cEEEEEe
Confidence 7666554
|
| >3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A | Back alignment and structure |
|---|
Probab=97.09 E-value=0.012 Score=57.23 Aligned_cols=150 Identities=14% Similarity=0.101 Sum_probs=98.0
Q ss_pred EeCCCCcEEEEEcCCceEEEEEEecCCcceeEEeecCCcccccceeEEEEEecCCCeEEEEecCCc-EEEecCCC---e-
Q psy12614 410 VVSNDGKYVAYSTESCVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVLISADSTLLLAVSLNGP-LYIIDLSS---L- 484 (708)
Q Consensus 410 ~~s~~g~~l~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~~~~~dg~-i~~~~~~~---~- 484 (708)
....+|..+++..++.||.-++..+. .++.++ ++.+..-..|..+..+|+|.+||..+..+. |..+..+. .
T Consensus 27 ~~~~n~t~i~~a~~n~iR~~~i~~~~---~Yk~L~-~~~~i~f~~i~qlvlSpsG~lLAl~g~~~V~Vv~LP~~~~~~~~ 102 (452)
T 3pbp_A 27 FSSQNGTRIVFIQDNIIRWYNVLTDS---LYHSLN-FSRHLVLDDTFHVISSTSGDLLCLFNDNEIFVMEVPWGYSNVED 102 (452)
T ss_dssp EEETTTTEEEEEETTEEEEEETTTCS---SCEEEE-CTTTCCCCTTCEEEECTTSSEEEEECSSEEEEEECCTTCSCCCC
T ss_pred EEEcCCCEEEEEECCEEEEEECCCCC---cceEEe-cCcccccCceeEEEECCCCCEEEEecCCeEEEEEecCccccCcc
Confidence 34567888888888889888776422 333322 443121113555999999999999987776 66665221 0
Q ss_pred ------EEEEEecC--CC-CCccCcceEEEEECCC---CcEEEEEecCCeEEEEECCc----eeeec---------CCCC
Q psy12614 485 ------EIKYCVDP--YK-SNLMSDVISLVQMSEC---KQYIVCADRKSHVVIWKNGQ----HHASL---------PRYR 539 (708)
Q Consensus 485 ------~~~~~~~~--~~-~~~~~~~i~~~~~s~~---~~~l~~~~~d~~i~iw~~~~----~~~~~---------~~~~ 539 (708)
-..+.+.. .. .. ...|..+.|+|- +..|++-..|+.|++||+.+ +. .+ ....
T Consensus 103 ~~~~~~~q~~ty~l~~~~~~~--~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~ 179 (452)
T 3pbp_A 103 VSIQDAFQIFHYSIDEEEVGP--KSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARV 179 (452)
T ss_dssp HHHHHTTEEEEEEGGGCC--C--CCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSC
T ss_pred cccccccceeEEEcCCcccCC--CCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCccc
Confidence 01122221 11 01 467999999994 55788888999999999993 11 22 2233
Q ss_pred CCceEEEEcCCCCEEEEEe--cCCcEEEE
Q psy12614 540 KPSTAMAIHPTLSTLVTVY--SDHRIVEF 566 (708)
Q Consensus 540 ~~v~~l~~s~d~~~l~~~~--~dg~i~vw 566 (708)
..|.+++|.+++=.|...+ ..|.|+-.
T Consensus 180 ~ev~S~~Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 180 NDITDLEFSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp CCEEEEEECTTSSCEEEEECTTSCEEEEE
T ss_pred ceEEEEEEcCCCcEEEEEecCCCCCEEEE
Confidence 6789999999887777755 77887654
|
| >2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=97.04 E-value=0.13 Score=49.44 Aligned_cols=221 Identities=12% Similarity=0.036 Sum_probs=111.5
Q ss_pred cEEEEECCCCeEeEE-EeecCCceEEEEEecCCCEEEEEeC----CC-------cEEEEEccCCcEEEEEecccccccEE
Q psy12614 92 FVNEYDMRRLNIKSS-TAVTSGTCWCLSVHKKKRLLAAGTE----QG-------HINLFQISDEGLLYEKLLDRQQGRIL 159 (708)
Q Consensus 92 ~i~vwd~~~~~~~~~-~~~~~~~v~~~~~s~~~~~la~~~~----d~-------~i~iwd~~~~~~~~~~~~~~~~~~v~ 159 (708)
.+..||..+.+-... +..........+...++..++.|+. ++ .+..||..+.+......+........
T Consensus 25 ~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~ 104 (318)
T 2woz_A 25 AAVAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCLFG 104 (318)
T ss_dssp EEEEEETTTTEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCSCE
T ss_pred ceEEECCCCCceecccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccccccc
Confidence 378899988774431 1111122233344557777888873 11 17788988887753222221111112
Q ss_pred EEEECCCCCEEEEecCC--------eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcC------CC
Q psy12614 160 CTAWHSSGDYLVTGCAA--------AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDS------GG 224 (708)
Q Consensus 160 ~~~~s~d~~~l~~~~~d--------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~------dg 224 (708)
.+.+ +++.++.|+.+ .+.++|..+.+-...-..+. ...-.+++. .+++ ++.|+. ..
T Consensus 105 ~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~------~r~~~~~~~-~~~~iyv~GG~~~~~~~~~ 175 (318)
T 2woz_A 105 LGEV--DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPI------KVYGHNVIS-HNGMIYCLGGKTDDKKCTN 175 (318)
T ss_dssp EEEE--TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSS------CEESCEEEE-ETTEEEEECCEESSSCBCC
T ss_pred eEEE--CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCC------cccccEEEE-ECCEEEEEcCCCCCCCccc
Confidence 2222 55666666531 47888887765433221110 111112222 3666 455553 24
Q ss_pred cEEEEeCCCCeeEEE--eeccccCeEEEEEeCCCCEEEEEecC-----CeEEEEEccCCcccccCCCCCCCCcceEEeEE
Q psy12614 225 FVRFWDGKTGVQWSD--VKTHKKDILALTVSEDENYLYCAGVD-----PTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVN 297 (708)
Q Consensus 225 ~i~~wd~~~~~~~~~--~~~~~~~i~~~~~s~~~~~l~~~~~d-----g~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~ 297 (708)
.+.+||..+.+-... +....... +++. -+++.++.|+.+ ..+.+||..+ . .|.....
T Consensus 176 ~~~~yd~~~~~W~~~~~~p~~r~~~-~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~--------~------~W~~~~~ 239 (318)
T 2woz_A 176 RVFIYNPKKGDWKDLAPMKTPRSMF-GVAI-HKGKIVIAGGVTEDGLSASVEAFDLKT--------N------KWEVMTE 239 (318)
T ss_dssp CEEEEETTTTEEEEECCCSSCCBSC-EEEE-ETTEEEEEEEEETTEEEEEEEEEETTT--------C------CEEECCC
T ss_pred eEEEEcCCCCEEEECCCCCCCcccc-eEEE-ECCEEEEEcCcCCCCccceEEEEECCC--------C------eEEECCC
Confidence 699999987754322 22111222 2222 256667777653 3567888876 3 4665544
Q ss_pred EeccccceEEEEEeCCEEEEEcCC--------------CeEEEEeCCCCceeec
Q psy12614 298 RVIHEGDVKSLALHGNRLYSGGLD--------------SYLSLSYYPPKTLVKY 337 (708)
Q Consensus 298 ~~~~~~~v~~l~~~~~~l~s~~~d--------------~~i~iw~~~~~~~~~~ 337 (708)
+.........+.+.+.+++.|+.+ ..+.+||+.+.....+
T Consensus 240 ~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~ 293 (318)
T 2woz_A 240 FPQERSSISLVSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEWAGM 293 (318)
T ss_dssp CSSCCBSCEEEEETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTEEEEE
T ss_pred CCCcccceEEEEECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCEehhh
Confidence 333222222333336666666654 3466777777664443
|
| >3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A | Back alignment and structure |
|---|
Probab=97.03 E-value=0.11 Score=50.64 Aligned_cols=150 Identities=16% Similarity=0.172 Sum_probs=95.8
Q ss_pred EEecCCCEEEEEeCCCcEEEEEccCC-cEEEEEeccc--ccccEEEEEECCCCCEEEEecCCeEEEEEcCCCc-------
Q psy12614 118 SVHKKKRLLAAGTEQGHINLFQISDE-GLLYEKLLDR--QQGRILCTAWHSSGDYLVTGCAAAVRVWDIHKGH------- 187 (708)
Q Consensus 118 ~~s~~~~~la~~~~d~~i~iwd~~~~-~~~~~~~~~~--~~~~v~~~~~s~d~~~l~~~~~d~i~iwd~~~~~------- 187 (708)
..+.+|..++++ .++.||.-++..+ .... ..+.. .-..|..+..+|+|++||..+...|.|-.+..+.
T Consensus 27 ~~~~n~t~i~~a-~~n~iR~~~i~~~~~Yk~-L~~~~~i~f~~i~qlvlSpsG~lLAl~g~~~V~Vv~LP~~~~~~~~~~ 104 (452)
T 3pbp_A 27 FSSQNGTRIVFI-QDNIIRWYNVLTDSLYHS-LNFSRHLVLDDTFHVISSTSGDLLCLFNDNEIFVMEVPWGYSNVEDVS 104 (452)
T ss_dssp EEETTTTEEEEE-ETTEEEEEETTTCSSCEE-EECTTTCCCCTTCEEEECTTSSEEEEECSSEEEEEECCTTCSCCCCHH
T ss_pred EEEcCCCEEEEE-ECCEEEEEECCCCCcceE-EecCcccccCceeEEEECCCCCEEEEecCCeEEEEEecCccccCcccc
Confidence 344566666664 3477888887733 2311 12221 1235778999999999999988888888876322
Q ss_pred -----eEEEEEecccCCCCCceeEEEEEEccCC----EEEEEcCCCcEEEEeCCCC--eeEEEee---------ccccCe
Q psy12614 188 -----AIHKMSLDKSSKFSKNTAVWCVAFCADF----TIITGDSGGFVRFWDGKTG--VQWSDVK---------THKKDI 247 (708)
Q Consensus 188 -----~~~~~~~~~~~~~~~~~~v~~~~~~~~~----~l~~~~~dg~i~~wd~~~~--~~~~~~~---------~~~~~i 247 (708)
..+.+..+.... .....|..+.|+|-+ .+++-..|+.|++||+... ++. .++ .....|
T Consensus 105 ~~~~~q~~ty~l~~~~~-~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev 182 (452)
T 3pbp_A 105 IQDAFQIFHYSIDEEEV-GPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDI 182 (452)
T ss_dssp HHHTTEEEEEEGGGCC---CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCE
T ss_pred cccccceeEEEcCCccc-CCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccceE
Confidence 123344332110 125779999999955 5999999999999999752 122 221 223678
Q ss_pred EEEEEeCCCCEEEEEe--cCCeEEEE
Q psy12614 248 LALTVSEDENYLYCAG--VDPTVVCF 271 (708)
Q Consensus 248 ~~~~~s~~~~~l~~~~--~dg~i~iw 271 (708)
.+++|.+++-.|+..+ ..|.|+-.
T Consensus 183 ~S~~Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 183 TDLEFSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp EEEEECTTSSCEEEEECTTSCEEEEE
T ss_pred EEEEEcCCCcEEEEEecCCCCCEEEE
Confidence 8899988776666644 56666544
|
| >2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12} | Back alignment and structure |
|---|
Probab=96.99 E-value=0.25 Score=48.15 Aligned_cols=230 Identities=11% Similarity=-0.007 Sum_probs=118.1
Q ss_pred CcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEE------EEEecCCCCCcEEEEEEe-----CCEEEEEcC------
Q psy12614 27 KVINCIACEPKSSRLAVSRADQSIEIWDISETPHVD------RVFIGDPLSNSIECLTWF-----NDRLFSGGL------ 89 (708)
Q Consensus 27 ~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~------~~~~~h~~~~~v~~l~~~-----~~~l~s~~~------ 89 (708)
.....|+|.|+|+.|.++...|.|.+++... .... ....... .....|+++ +.+|+.+..
T Consensus 18 ~~P~~i~~~pdG~~l~V~e~~G~i~~~~~~g-~~~~~~~~~~~v~~~g~--~g~~gia~~pdf~~~g~lYv~~~~~~~~g 94 (353)
T 2g8s_A 18 DHPWALAFLPDNHGMLITLRGGELRHWQAGK-GLSAPLSGVPDVWAHGQ--GGLLDVVLAPDFAQSRRIWLSYSEVGDDG 94 (353)
T ss_dssp SSEEEEEECSTTCCEEEEETTTEEEEEETTT-EECCCCBSCCCCCCSTT--CSEEEEEECTTHHHHCEEEEEEEEECSSS
T ss_pred CCcEEEEEcCCCCEEEEEeCCceEEEEeCCC-ceeeEecCCcccccCCC--CCceeEEECCCCCCCCEEEEEEeCCCCCC
Confidence 3467999999999344455679999998543 2110 0111122 567899998 355554432
Q ss_pred --CCcEEEEECCCC--e--EeEE-Eeec------CCceEEEEEecCCCEEEEEeCC-------------CcEEEEEccCC
Q psy12614 90 --QGFVNEYDMRRL--N--IKSS-TAVT------SGTCWCLSVHKKKRLLAAGTEQ-------------GHINLFQISDE 143 (708)
Q Consensus 90 --d~~i~vwd~~~~--~--~~~~-~~~~------~~~v~~~~~s~~~~~la~~~~d-------------~~i~iwd~~~~ 143 (708)
...|..|++... + .... +... ...-..|+|.|||.+.++.+.. |.|.-++....
T Consensus 95 ~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~ 174 (353)
T 2g8s_A 95 KAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGE 174 (353)
T ss_dssp CEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSC
T ss_pred CceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCC
Confidence 235777776543 1 1111 1111 1123579999999655554332 45666665532
Q ss_pred -------------cEEEEEecccccccEEEEEECC-CCCEEEEecC-C-eEEEEEcCCCceE----E-------------
Q psy12614 144 -------------GLLYEKLLDRQQGRILCTAWHS-SGDYLVTGCA-A-AVRVWDIHKGHAI----H------------- 190 (708)
Q Consensus 144 -------------~~~~~~~~~~~~~~v~~~~~s~-d~~~l~~~~~-d-~i~iwd~~~~~~~----~------------- 190 (708)
... ....++ .....++|.| ++.+.++-.. + .=.|.-+..+... .
T Consensus 175 ~p~~npf~~~~~~~~~--i~a~G~-rnp~gl~~d~~~g~l~~~d~g~~~~dei~~i~~G~nyGwp~~~~~~~~~~~~~~~ 251 (353)
T 2g8s_A 175 IPDDNPFIKESGVRAE--IWSYGI-RNPQGMAMNPWSNALWLNEHGPRGGDEINIPQKGKNYGWPLATWGINYSGFKIPE 251 (353)
T ss_dssp CCTTCTTTTSTTSCTT--EEEECC-SEEEEEEEETTTTEEEEEEECSBSCEEEECCCTTCBCCTTTBCSSBCTTSSCCTT
T ss_pred CCCCCCCcCCCCCCcc--EEEEcC-cCccceEEECCCCCEEEEecCCCCCcEEeEeccCCcCCCCCccCCCCCCCCccCc
Confidence 000 011122 2367899999 5654443221 1 1122111111110 0
Q ss_pred -------EEEecccCCCCCceeEEEEEEcc-------CCEE-EEEcCCCcEEEEeCCCCeeEEE---eeccccCeEEEEE
Q psy12614 191 -------KMSLDKSSKFSKNTAVWCVAFCA-------DFTI-ITGDSGGFVRFWDGKTGVQWSD---VKTHKKDILALTV 252 (708)
Q Consensus 191 -------~~~~~~~~~~~~~~~v~~~~~~~-------~~~l-~~~~~dg~i~~wd~~~~~~~~~---~~~~~~~i~~~~~ 252 (708)
.+..+. ..+.+...+..++|.. +|.+ ++....+.|...++..++.... +......+..+++
T Consensus 252 ~~~~~~~~~~~P~-~~~~~~~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~ 330 (353)
T 2g8s_A 252 AKGEIVAGTEQPV-FYWKDSPAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRT 330 (353)
T ss_dssp CCBSSCTTSCCCS-EEESSCCCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEE
T ss_pred ccCCCCCCccCCe-EEeCCCcCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEE
Confidence 000000 0001123566777763 4664 4445567888888776654332 2222357899999
Q ss_pred eCCCCEEEEEe
Q psy12614 253 SEDENYLYCAG 263 (708)
Q Consensus 253 s~~~~~l~~~~ 263 (708)
.|||.+.++..
T Consensus 331 ~pdG~lyv~td 341 (353)
T 2g8s_A 331 GPDGYLYVLTD 341 (353)
T ss_dssp CTTSCEEEEEC
T ss_pred CCCCcEEEEEe
Confidence 99998666443
|
| >1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A* | Back alignment and structure |
|---|
Probab=96.96 E-value=0.0064 Score=53.11 Aligned_cols=147 Identities=7% Similarity=-0.038 Sum_probs=88.0
Q ss_pred eeEEEEEecCCCeEEEEecCCcEEEecCCCeEE------EEEecCCCCCccCcceEEEEECCCCcEEEEEecCCeEEEEE
Q psy12614 454 IFTHVLISADSTLLLAVSLNGPLYIIDLSSLEI------KYCVDPYKSNLMSDVISLVQMSECKQYIVCADRKSHVVIWK 527 (708)
Q Consensus 454 ~i~~~~~s~d~~~l~~~~~dg~i~~~~~~~~~~------~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~ 527 (708)
.++.++|+|||.+.++ .+|.||..+..+... -..+-.. + -..-.++.|.|+|.+.++ .||.|+-++
T Consensus 42 ~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~-G---w~~F~a~~fD~~G~LYav--~dG~iyr~~ 113 (236)
T 1tl2_A 42 NFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNG-G---WNQFQFLFFDPNGYLYAV--SKDKLYKAS 113 (236)
T ss_dssp TCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECS-C---GGGCSEEEECTTSCEEEE--ETTEEEEES
T ss_pred cceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEeccc-c---cccceEEEECCCCCEEEe--CCCEEEEeC
Confidence 4556999999997766 777799887643110 1111110 1 112478999999998888 569888776
Q ss_pred CCceee--------ec-CCCCCCceEEEEcCCCCEEEEEecCCcEEEEEcCCCCCCchhhhhhccCchhhh-cCCCCeeE
Q psy12614 528 NGQHHA--------SL-PRYRKPSTAMAIHPTLSTLVTVYSDHRIVEFDLNRKAFTTFSRKLETNHPNEWL-SRQLPVLG 597 (708)
Q Consensus 528 ~~~~~~--------~~-~~~~~~v~~l~~s~d~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~ 597 (708)
-.+... .+ ..-=..+..|.|.|+|.+-++. |+.++-+..+++....|.... ..+. +.-..-..
T Consensus 114 pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr~~~P~~~~~~wl~~~-----~~~g~~g~~~yr~ 186 (236)
T 1tl2_A 114 PPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYKALPPVSNQDNWLARA-----TKIGQGGWDTFKF 186 (236)
T ss_dssp CCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEEECCCSSTTCCHHHHC-----EEEESSSGGGEEE
T ss_pred CCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEEecCCCCCCCccccccc-----ceeccCCcceEEE
Confidence 542100 11 1111467999999999977766 887766656655555454211 0111 12224455
Q ss_pred EEeCCCCCceEEEEcCeeEE
Q psy12614 598 IEFDPQDSSLIYLMDDSALC 617 (708)
Q Consensus 598 l~~s~~~~~l~~~~~d~~i~ 617 (708)
+.|++++...++. ++.++
T Consensus 187 l~f~~~G~l~~v~--~g~~Y 204 (236)
T 1tl2_A 187 LFFSSVGTLFGVQ--GGKFY 204 (236)
T ss_dssp EEECTTSCEEEEE--TTEEE
T ss_pred EEECCCCcEEEEe--CCeEE
Confidence 7799999866665 77443
|
| >2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=96.84 E-value=0.23 Score=47.68 Aligned_cols=221 Identities=13% Similarity=0.098 Sum_probs=110.2
Q ss_pred EEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe-CCEEEEEcC----CC-------cEEEEECCCCeEeEEE
Q psy12614 40 RLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF-NDRLFSGGL----QG-------FVNEYDMRRLNIKSST 107 (708)
Q Consensus 40 ~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~-~~~l~s~~~----d~-------~i~vwd~~~~~~~~~~ 107 (708)
+++.|+. .+..||..+++-....+.... ...-.+++.. +..++.|+. ++ .+.++|..+.+-...-
T Consensus 18 i~~~GG~--~~~~yd~~~~~W~~~~~~~~~-~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~ 94 (318)
T 2woz_A 18 ILLVNDT--AAVAYDPMENECYLTALAEQI-PRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLP 94 (318)
T ss_dssp EEEECSS--EEEEEETTTTEEEEEEECTTS-CSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECS
T ss_pred hhhcccc--ceEEECCCCCceecccCCccC-CccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECC
Confidence 3444443 489999998775443333212 1333444444 777777773 12 1778888876533211
Q ss_pred eecCCc-eEEEEEecCCCEEEEEeCC-------CcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecC----
Q psy12614 108 AVTSGT-CWCLSVHKKKRLLAAGTEQ-------GHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCA---- 175 (708)
Q Consensus 108 ~~~~~~-v~~~~~s~~~~~la~~~~d-------~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~---- 175 (708)
...... -.+++. -++..++.|+.+ ..+.+||..+.+......+......- +++. .+++.++.|+.
T Consensus 95 ~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~-~~~~-~~~~iyv~GG~~~~~ 171 (318)
T 2woz_A 95 PLPSARCLFGLGE-VDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGH-NVIS-HNGMIYCLGGKTDDK 171 (318)
T ss_dssp CBSSCBCSCEEEE-ETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESC-EEEE-ETTEEEEECCEESSS
T ss_pred CCCccccccceEE-ECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCccccc-EEEE-ECCEEEEEcCCCCCC
Confidence 111111 112222 256677777653 35888999888775322222111111 1222 35666666653
Q ss_pred --C-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCC-----CcEEEEeCCCCeeEEE--eeccc
Q psy12614 176 --A-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSG-----GFVRFWDGKTGVQWSD--VKTHK 244 (708)
Q Consensus 176 --d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~d-----g~i~~wd~~~~~~~~~--~~~~~ 244 (708)
- .+.+||+.+.+-...-.... ...-.+++.. +++ ++.|+.+ ..+.+||+.+.+-... +....
T Consensus 172 ~~~~~~~~yd~~~~~W~~~~~~p~------~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r 244 (318)
T 2woz_A 172 KCTNRVFIYNPKKGDWKDLAPMKT------PRSMFGVAIH-KGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQER 244 (318)
T ss_dssp CBCCCEEEEETTTTEEEEECCCSS------CCBSCEEEEE-TTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSCC
T ss_pred CccceEEEEcCCCCEEEECCCCCC------CcccceEEEE-CCEEEEEcCcCCCCccceEEEEECCCCeEEECCCCCCcc
Confidence 1 58999998765433221111 1111122222 555 5566543 3577899887653322 22111
Q ss_pred cCeEEEEEeCCCCEEEEEecC--------------CeEEEEEccC
Q psy12614 245 KDILALTVSEDENYLYCAGVD--------------PTVVCFQRTR 275 (708)
Q Consensus 245 ~~i~~~~~s~~~~~l~~~~~d--------------g~i~iw~~~~ 275 (708)
... +++. -+++.++.|+.+ ..+.+||..+
T Consensus 245 ~~~-~~~~-~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~ 287 (318)
T 2woz_A 245 SSI-SLVS-LAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDK 287 (318)
T ss_dssp BSC-EEEE-ETTEEEEECCBCCBC----CCBCCBCCCEEEEETTT
T ss_pred cce-EEEE-ECCEEEEECCeeccCCCCceeccceeeeEEEEeCCC
Confidence 222 2222 355666676653 3577888776
|
| >3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=96.83 E-value=0.37 Score=46.25 Aligned_cols=248 Identities=12% Similarity=0.042 Sum_probs=126.2
Q ss_pred EEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEec----ccccccEEEEEECCC---CCEEEEe---cC
Q psy12614 106 STAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLL----DRQQGRILCTAWHSS---GDYLVTG---CA 175 (708)
Q Consensus 106 ~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~----~~~~~~v~~~~~s~d---~~~l~~~---~~ 175 (708)
.+...-...+.|+|.|||.++++--..|.|++++..+++......+ ....+....|+|+|+ +..|+.. ..
T Consensus 26 ~va~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~ 105 (347)
T 3das_A 26 TVATGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSAS 105 (347)
T ss_dssp EEECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSS
T ss_pred EeecCCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCC
Confidence 3333345788999999998776654489999998766655322222 223567899999996 3445432 23
Q ss_pred C-eEEEEEcCCCc--------eEEEEE-ecccCCCCCceeEEEEEEccCCEEEEE-c-------------CCCcEEEEeC
Q psy12614 176 A-AVRVWDIHKGH--------AIHKMS-LDKSSKFSKNTAVWCVAFCADFTIITG-D-------------SGGFVRFWDG 231 (708)
Q Consensus 176 d-~i~iwd~~~~~--------~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~l~~~-~-------------~dg~i~~wd~ 231 (708)
+ .|.-|.+..+. ....+. ... .. ......++|.|||.|..+ + ..|.|.-.+.
T Consensus 106 ~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~-~~---~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~ 181 (347)
T 3das_A 106 DNRIVRMLYDEKKPSGEQLGAPDTVFRGIPK-GV---IHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTP 181 (347)
T ss_dssp SEEEEEEEBCTTSCTTCCBCCCEEEEEEECC-CS---SCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECT
T ss_pred CCEEEEEEeCCCCcccccCCCcEEEEEcCCC-CC---CccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeC
Confidence 4 67777665421 111111 111 01 223457999999974433 2 1356666665
Q ss_pred CCC---------eeEEEeeccccCeEEEEEeCCCCEEEEEe-cCCeEEEEEccCCccc--ccCCCCCCCCcceEEeEEEe
Q psy12614 232 KTG---------VQWSDVKTHKKDILALTVSEDENYLYCAG-VDPTVVCFQRTRKPQV--CSTSGPEQGSSVWVRSVNRV 299 (708)
Q Consensus 232 ~~~---------~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-~dg~i~iw~~~~~~~~--~~~~g~~~~~~~~~~~~~~~ 299 (708)
... ..+.. .+|. ....++|+|+|++.++-. .++.=.+--+.....- -...+.........+...+.
T Consensus 182 dG~ip~~nPf~~~~i~a-~G~R-Np~Gla~dp~G~L~~~d~g~~~~deln~i~~G~nyGwP~~~g~~~~~~~~~P~~~~~ 259 (347)
T 3das_A 182 DGEPAPGNPFPGSPVYS-YGHR-NVQGLAWDDKQRLFASEFGQDTWDELNAIKPGDNYGWPEAEGKGGGSGFHDPVAQWS 259 (347)
T ss_dssp TSSBCTTCSSTTCCEEE-BCCS-BCCEEEECTTCCEEEEECCSSSCEEEEEECTTCBCCTTTCCSSCCCTTCCCCSEEEC
T ss_pred CCCccCCCCCCCCeEEe-eCCC-CcceEEECCCCCEEEEecCCCCCceeeEEcCCCEecCCcccCCCCCccccCCcEecC
Confidence 421 11111 2343 446899999876554321 2222223222220000 00001000000001222333
Q ss_pred ccccceEEEEEe-CCEEEEEcCCCeEEEEeCCCCce----eec-CccCCCCceEEEEcCCcEEEEE
Q psy12614 300 IHEGDVKSLALH-GNRLYSGGLDSYLSLSYYPPKTL----VKY-PCTLAQSTPVSLAKDIQHVLLQ 359 (708)
Q Consensus 300 ~~~~~v~~l~~~-~~~l~s~~~d~~i~iw~~~~~~~----~~~-~~~~~~~~~~~~s~~~~~l~~~ 359 (708)
.+......++|. +..++..-..+.|....+..... ..+ .+.......++..|||.+.++.
T Consensus 260 ~~~~ap~G~~~~~g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~~pDG~lyv~t 325 (347)
T 3das_A 260 TDEASPSGIAYAEGSVWMAGLRGERLWRIPLKGTAAAADPQAFLEGEYGRLRTVAPAGGDKLWLVT 325 (347)
T ss_dssp TTTCCEEEEEEETTEEEEEESTTCSEEEEEEETTEESSCCEEESTTTSSCEEEEEEEETTEEEEEE
T ss_pred CCCCCCcceEEEcCceeeccccCCEEEEEEecCCceecceEEeecCCCCCccEEEECCCCcEEEEE
Confidence 232466788888 66666665666666666654421 111 1122344567888888776664
|
| >1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A | Back alignment and structure |
|---|
Probab=96.78 E-value=0.045 Score=61.75 Aligned_cols=233 Identities=9% Similarity=0.119 Sum_probs=140.5
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe-CCEEEEEcCCCcEEEEECCC-CeEeEEEe
Q psy12614 31 CIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF-NDRLFSGGLQGFVNEYDMRR-LNIKSSTA 108 (708)
Q Consensus 31 ~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~-~~~l~s~~~d~~i~vwd~~~-~~~~~~~~ 108 (708)
+.-.+|..+.||.=. ..++.|+|+.+...+ ..|.+..+|.--.|- .+.|+-.+ +..|.-|++.. ..+.+.+.
T Consensus 70 sAIMnP~~~iiALra-g~~lQiFnl~~k~kl----ks~~~~e~VvfWkWis~~~l~lVT-~~aVyHW~~~~~s~P~k~fd 143 (1630)
T 1xi4_A 70 SAIMNPASKVIALKA-GKTLQIFNIEMKSKM----KAHTMTDDVTFWKWISLNTVALVT-DNAVYHWSMEGESQPVKMFD 143 (1630)
T ss_pred hhccCCCcceEEEec-CCeEEEeehHHhhhh----cccccCCCceEEEecCCCeeEEEc-CCeEEEeccCCCCccHHHHh
Confidence 344577777777754 568999999986644 344444677777777 55555443 46799999974 34544444
Q ss_pred ec----CCceEEEEEecCCCEEEEEe-------CCCcEEEEEccCCcEEEEEecccccccEEEEEEC--C-CCCEEEEec
Q psy12614 109 VT----SGTCWCLSVHKKKRLLAAGT-------EQGHINLFQISDEGLLYEKLLDRQQGRILCTAWH--S-SGDYLVTGC 174 (708)
Q Consensus 109 ~~----~~~v~~~~~s~~~~~la~~~-------~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s--~-d~~~l~~~~ 174 (708)
.| +..|..-..+++.++++..+ -.|.+.+|..+.+.. +.+.||.+....+... + ..+.++.+.
T Consensus 144 R~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~s---Q~iegha~~F~~~~~~~~~~~~~l~~f~~ 220 (1630)
T 1xi4_A 144 RHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVS---QPIEGHAASFAQFKMEGNAEESTLFCFAV 220 (1630)
T ss_pred cchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccccc---hhhhHhHhhhheeccCCCCCCceEEEEEE
Confidence 44 46788888899999887543 257889999887655 5677776655444432 1 122333332
Q ss_pred C---C-eEEEEEcCCC---ceE-----EEEEecccCCCCCceeEEEEEEccC-CEEEEEcCCCcEEEEeCCCCeeEEEee
Q psy12614 175 A---A-AVRVWDIHKG---HAI-----HKMSLDKSSKFSKNTAVWCVAFCAD-FTIITGDSGGFVRFWDGKTGVQWSDVK 241 (708)
Q Consensus 175 ~---d-~i~iwd~~~~---~~~-----~~~~~~~~~~~~~~~~v~~~~~~~~-~~l~~~~~dg~i~~wd~~~~~~~~~~~ 241 (708)
. + .++|.++... ... ..+..+.. ...+...++..++. |-+...+.-|.|.+||+.+|.++..-+
T Consensus 221 ~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~---~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~~~r 297 (1630)
T 1xi4_A 221 RGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPE---AQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNR 297 (1630)
T ss_pred ecCCCceEEEEecCCCccCCCCCccccccccCCcc---cccCcceEEEeccccCEEEEEecCceEEEEecccchhhhhcc
Confidence 2 2 6777776432 110 00111100 01233344555543 346677888999999999998876655
Q ss_pred ccccCeEEEEEeCCCCEEEEEecCCeEEEEEccC
Q psy12614 242 THKKDILALTVSEDENYLYCAGVDPTVVCFQRTR 275 (708)
Q Consensus 242 ~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~ 275 (708)
-....|...+......-++.....|.|.--.+..
T Consensus 298 is~~~iF~~~~~~~~~g~~~vnr~G~vl~v~v~~ 331 (1630)
T 1xi4_A 298 ISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEE 331 (1630)
T ss_pred ccCCceEEeccCCCCCceEEEcCCceEEEEEEcc
Confidence 4455555555444434455555666666665554
|
| >3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=96.78 E-value=0.41 Score=45.98 Aligned_cols=233 Identities=11% Similarity=0.057 Sum_probs=128.9
Q ss_pred eeeeeeccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEE-EE----ecCCCCCcEEEEEEe-----CCEEE
Q psy12614 16 VHNIKFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDR-VF----IGDPLSNSIECLTWF-----NDRLF 85 (708)
Q Consensus 16 ~~~~~~~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~-~~----~~h~~~~~v~~l~~~-----~~~l~ 85 (708)
...+..+...-.....|+|.|||+++++-...|.|.+++..++..... .+ .... .....|+++ +..|+
T Consensus 21 ~~~~~~va~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~--~GllGia~~Pdf~~~g~lY 98 (347)
T 3das_A 21 VKVLRTVATGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGE--GGLLGIALSPDYASDHMVY 98 (347)
T ss_dssp EEEEEEEECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTT--BSEEEEEECTTHHHHCEEE
T ss_pred CceeEEeecCCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCC--CCceeeEeccccccCCEEE
Confidence 334445555556678999999999877765589999998766654221 11 1223 678999997 35554
Q ss_pred EE---cCCCcEEEEECCCC----------eEe-EEEe-ecCCceEEEEEecCCCEEEEEeC-------------CCcEEE
Q psy12614 86 SG---GLQGFVNEYDMRRL----------NIK-SSTA-VTSGTCWCLSVHKKKRLLAAGTE-------------QGHINL 137 (708)
Q Consensus 86 s~---~~d~~i~vwd~~~~----------~~~-~~~~-~~~~~v~~~~~s~~~~~la~~~~-------------d~~i~i 137 (708)
.. ..++.|.-|.+..+ +.+ ..+. .....-..|+|.|||.+.++.+. .|.|.-
T Consensus 99 v~yt~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlR 178 (347)
T 3das_A 99 AYFTSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILR 178 (347)
T ss_dssp EEEECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEE
T ss_pred EEEecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEE
Confidence 43 24566777766542 111 1121 11123457999999987776442 244444
Q ss_pred EEccCC--------cEEEEEecccccccEEEEEECCCCCEEEEec-CC---eEEEEEcCCCce-----------------
Q psy12614 138 FQISDE--------GLLYEKLLDRQQGRILCTAWHSSGDYLVTGC-AA---AVRVWDIHKGHA----------------- 188 (708)
Q Consensus 138 wd~~~~--------~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~-~d---~i~iwd~~~~~~----------------- 188 (708)
.+.... ... ....+|. ....++|+|+|.+.++-. .+ .|... ..|..
T Consensus 179 i~~dG~ip~~nPf~~~~--i~a~G~R-Np~Gla~dp~G~L~~~d~g~~~~deln~i--~~G~nyGwP~~~g~~~~~~~~~ 253 (347)
T 3das_A 179 MTPDGEPAPGNPFPGSP--VYSYGHR-NVQGLAWDDKQRLFASEFGQDTWDELNAI--KPGDNYGWPEAEGKGGGSGFHD 253 (347)
T ss_dssp ECTTSSBCTTCSSTTCC--EEEBCCS-BCCEEEECTTCCEEEEECCSSSCEEEEEE--CTTCBCCTTTCCSSCCCTTCCC
T ss_pred EeCCCCccCCCCCCCCe--EEeeCCC-CcceEEECCCCCEEEEecCCCCCceeeEE--cCCCEecCCcccCCCCCccccC
Confidence 444322 110 1122333 346789999887666532 22 23322 22211
Q ss_pred -EEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCee----EEEeeccccCeEEEEEeCCCCEEEEE
Q psy12614 189 -IHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQ----WSDVKTHKKDILALTVSEDENYLYCA 262 (708)
Q Consensus 189 -~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~----~~~~~~~~~~i~~~~~s~~~~~l~~~ 262 (708)
+..+. .+......++|.. |. ++..-..+.|....+..+.. ...+.+....+..++..|||.++++.
T Consensus 254 P~~~~~-------~~~~ap~G~~~~~-g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~~pDG~lyv~t 325 (347)
T 3das_A 254 PVAQWS-------TDEASPSGIAYAE-GSVWMAGLRGERLWRIPLKGTAAAADPQAFLEGEYGRLRTVAPAGGDKLWLVT 325 (347)
T ss_dssp CSEEEC-------TTTCCEEEEEEET-TEEEEEESTTCSEEEEEEETTEESSCCEEESTTTSSCEEEEEEEETTEEEEEE
T ss_pred CcEecC-------CCCCCCcceEEEc-CceeeccccCCEEEEEEecCCceecceEEeecCCCCCccEEEECCCCcEEEEE
Confidence 00110 0013456677764 54 55555666777777655432 22334445678899999999766654
Q ss_pred e
Q psy12614 263 G 263 (708)
Q Consensus 263 ~ 263 (708)
+
T Consensus 326 d 326 (347)
T 3das_A 326 S 326 (347)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=96.63 E-value=0.054 Score=51.76 Aligned_cols=196 Identities=8% Similarity=-0.009 Sum_probs=102.4
Q ss_pred CEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe----CCEEEEE--cCCCcEEEEECCCCeEeEEEeec--
Q psy12614 39 SRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF----NDRLFSG--GLQGFVNEYDMRRLNIKSSTAVT-- 110 (708)
Q Consensus 39 ~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~----~~~l~s~--~~d~~i~vwd~~~~~~~~~~~~~-- 110 (708)
.++++++.||.|.-.|..+|+.+= .+.... ..++....-. +..++.+ +.||.|..++..+|.....+...
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W-~~~~~~-~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~l 88 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIW-SIEPEN-FQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQL 88 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEE-EECGGG-SCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHH
T ss_pred CEEEEEeCCCeEEEEECCCCcEEE-EecCCc-cCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccc
Confidence 468888999999999999988764 333221 0222221111 2244444 68999999999998665544421
Q ss_pred --CCceEE---EEE-----ecCCCEEEEEeCCCcEEEEEccCCcEEEEEeccccccc-----EEEEEEC-----CCCCEE
Q psy12614 111 --SGTCWC---LSV-----HKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGR-----ILCTAWH-----SSGDYL 170 (708)
Q Consensus 111 --~~~v~~---~~~-----s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-----v~~~~~s-----~d~~~l 170 (708)
..++.. ..+ +..+..+++|+.+|.+...|..+|+.+.........+. ..|.... ..+..|
T Consensus 89 v~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~v 168 (339)
T 2be1_A 89 VSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECENMI 168 (339)
T ss_dssp HTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC--------------------CCEE
T ss_pred eeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccccccccccCCCeE
Confidence 112211 000 01455788899999999999999999865444322111 1111111 123567
Q ss_pred EEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeE-EEEEEccCCEEEEEcCCCcEEEEeCCCCeeEE
Q psy12614 171 VTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAV-WCVAFCADFTIITGDSGGFVRFWDGKTGVQWS 238 (708)
Q Consensus 171 ~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v-~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~ 238 (708)
+.+..+ .+.+.+ ++|+ +..+....-........+ .....+.|+.++.++.||.|.-+|..+|+.+.
T Consensus 169 ~ig~~~y~v~~~~-~sG~-~W~~~~s~~~~~~~~~~~~~~~~~s~Dg~~~~~~~dg~v~A~d~~~G~~~W 236 (339)
T 2be1_A 169 VIGKTIFELGIHS-YDGA-SYNVTYSTWQQNVLDVPLALQNTFSKDGMCIAPFRDKSLLASDLDFRIARW 236 (339)
T ss_dssp EEEEEEEECEECC-TTSC-CCCCEEEEEECCTTTHHHHTTCSSCSSSCCEEEETTTEEEEECSTTCCEEE
T ss_pred EEecceEEEEEEC-CCCC-eEEEecccccccccccccccccccccCCcEEEECCCCEEEEEECCCCcEEE
Confidence 776666 777766 4454 222211100000000000 00001123555566777777777777776654
|
| >3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A* | Back alignment and structure |
|---|
Probab=96.50 E-value=0.68 Score=44.99 Aligned_cols=232 Identities=11% Similarity=-0.038 Sum_probs=120.4
Q ss_pred ccceEEEEEe-CCEEEEEcCCCeEEEEeCCCC-ceeecC---ccCCCCceEEEEcC----CcEEEEEc----C----CeE
Q psy12614 302 EGDVKSLALH-GNRLYSGGLDSYLSLSYYPPK-TLVKYP---CTLAQSTPVSLAKD----IQHVLLQY----T----SHL 364 (708)
Q Consensus 302 ~~~v~~l~~~-~~~l~s~~~d~~i~iw~~~~~-~~~~~~---~~~~~~~~~~~s~~----~~~l~~~~----~----~~i 364 (708)
-.....+++. ...|+.+..++.|++++.... .+..+. ........++++|+ +.+.++.. + +.|
T Consensus 28 l~~P~~ia~~pdG~l~V~e~~g~I~~~d~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v 107 (354)
T 3a9g_A 28 LEVPWSIAPLGGGRYLVTERPGRLVLISPSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRV 107 (354)
T ss_dssp CSCEEEEEEEETTEEEEEETTTEEEEECSSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEE
T ss_pred CCCCeEEEEcCCCeEEEEeCCCEEEEEeCCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEE
Confidence 3456788888 445666677799998874432 111111 11234567999997 55555433 2 567
Q ss_pred EEEEecCCCCCCCCCCCCCCcccCCCCceEEEE-EEecCCCceEEEEeCCCCcEEEE-EcCCc-----------eEEEEE
Q psy12614 365 ELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVK-MSAVNNATIRCSVVSNDGKYVAY-STESC-----------VRLHSL 431 (708)
Q Consensus 365 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~~~s~~g~~l~~-~~d~~-----------i~i~~~ 431 (708)
..|+..... .. +. ....+.. +..........++|.|||.++++ ++.+. =+|+.+
T Consensus 108 ~r~~~~~~~---------~~---~~-~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri 174 (354)
T 3a9g_A 108 IRGRLDGST---------FK---LK-EVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRV 174 (354)
T ss_dssp EEEEECSSS---------CC---EE-EEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEE
T ss_pred EEEEECCCC---------cC---cC-ccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEE
Confidence 777765431 00 00 0112222 22111223467899999987666 33211 155665
Q ss_pred EecCC--------cceeEEeecCCcccccceeEEEEEec-CCCeEEEEecCCc---EEEecCCCe---------------
Q psy12614 432 DLDGD--------KPQISRIKNLPAPLFKSIFTHVLISA-DSTLLLAVSLNGP---LYIIDLSSL--------------- 484 (708)
Q Consensus 432 ~~~~~--------~~~~~~~~~~~~~~~~~~i~~~~~s~-d~~~l~~~~~dg~---i~~~~~~~~--------------- 484 (708)
..... ...+.. .++. ....++|+| +|.+.++-..... |..+..+.-
T Consensus 175 ~~dG~~p~~npf~~~~i~a----~G~r---np~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~ 247 (354)
T 3a9g_A 175 DEEGRPPADNPFPNSPIWS----YGHR---NPQGIDWHRASGVMVATEHGPVGHDEVNIILKGGNYGWPLATGKAGRGEF 247 (354)
T ss_dssp CTTSCCCTTSSSTTCCEEE----ECCS---CCCEEEECTTTCCEEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCCTTS
T ss_pred cCCCCCCCCCCCCCCcEEE----EccC---CcceEEEeCCCCCEEEEecCCCCCcEEEEecCCCcCCCCcccCCCCCCCC
Confidence 54221 011111 1121 223389999 5665544322221 544443310
Q ss_pred -EEEEEecCCCCCccCcceEEEEEC-------CCCcEEEEEecCCeEEEEECCce--e---ee-cCCCCCCceEEEEcCC
Q psy12614 485 -EIKYCVDPYKSNLMSDVISLVQMS-------ECKQYIVCADRKSHVVIWKNGQH--H---AS-LPRYRKPSTAMAIHPT 550 (708)
Q Consensus 485 -~~~~~~~~~~~~~~~~~i~~~~~s-------~~~~~l~~~~~d~~i~iw~~~~~--~---~~-~~~~~~~v~~l~~s~d 550 (708)
..+..+. .. ......++|. .+|.++++.-..+.|...+++.. . .. +.+....+..+++.||
T Consensus 248 ~~p~~~~~--~~---~~ap~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pD 322 (354)
T 3a9g_A 248 VDPVIDTG--SE---TWAPSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDD 322 (354)
T ss_dssp CCCSEECT--TC---CCCEEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTT
T ss_pred cCCEeecC--CC---CcCCcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCC
Confidence 0111110 01 2356778883 57777777667788888888721 1 22 3333467899999999
Q ss_pred CCEEEEEe
Q psy12614 551 LSTLVTVY 558 (708)
Q Consensus 551 ~~~l~~~~ 558 (708)
|.+.++..
T Consensus 323 G~lyv~~~ 330 (354)
T 3a9g_A 323 GGILISTS 330 (354)
T ss_dssp SCEEEEEC
T ss_pred CcEEEEEe
Confidence 97666553
|
| >1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A* | Back alignment and structure |
|---|
Probab=96.44 E-value=0.057 Score=47.22 Aligned_cols=147 Identities=5% Similarity=-0.105 Sum_probs=84.5
Q ss_pred CceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEeccccccc--------EEEEEECCCCCEEEEecCCeEEEEEc
Q psy12614 112 GTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGR--------ILCTAWHSSGDYLVTGCAAAVRVWDI 183 (708)
Q Consensus 112 ~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~--------v~~~~~s~d~~~l~~~~~d~i~iwd~ 183 (708)
..+..++|+|+|.+.++ .+|.++-.+..+... ....+.... -.++.|.|+|.+.++ +.+.|.-++.
T Consensus 41 ~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~---~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav-~dG~iyr~~p 114 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDN---DNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV-SKDKLYKASP 114 (236)
T ss_dssp TTCSEEEECTTSCEEEE--ETTEEEEESCCCSTT---CCHHHHCEEEECSCGGGCSEEEECTTSCEEEE-ETTEEEEESC
T ss_pred ccceeEEECCCccEEEE--eCCeEEEECCCCCCc---ccccccccEecccccccceEEEECCCCCEEEe-CCCEEEEeCC
Confidence 36779999999987766 667665555433211 111111222 378999999987777 3347777775
Q ss_pred CCCceE------EEEEecccCCCCCceeEEEEEEccCCEEEEEcCCCcEEEEeCCCCe------eEEEee-ccccCeEEE
Q psy12614 184 HKGHAI------HKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGV------QWSDVK-THKKDILAL 250 (708)
Q Consensus 184 ~~~~~~------~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~wd~~~~~------~~~~~~-~~~~~i~~~ 250 (708)
.+.... ..+-. ..-..+..+.|.|+|.|.+.. ++.++-....++. ....+- ..-....-+
T Consensus 115 P~~~~~~Wl~~a~~vg~------~gw~~~~~lff~p~G~Lyav~-dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l 187 (236)
T 1tl2_A 115 PQSDTDNWIARATEVGS------GGWSGFKFLFFHPNGYLYAVH-GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFL 187 (236)
T ss_dssp CCSTTCCHHHHSEEEEC------SSGGGEEEEEECTTSCEEEEE-TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEE
T ss_pred CcCCCCceeccccEecc------CCCCceEEEEECCCceEEEEe-CCcEEecCCCCCCCcccccccceeccCCcceEEEE
Confidence 331110 11110 113567999999999877777 8886544433221 111111 222344557
Q ss_pred EEeCCCCEEEEEecCCeEEEEEccC
Q psy12614 251 TVSEDENYLYCAGVDPTVVCFQRTR 275 (708)
Q Consensus 251 ~~s~~~~~l~~~~~dg~i~iw~~~~ 275 (708)
.|++++...++. ++ ++|....
T Consensus 188 ~f~~~G~l~~v~--~g--~~Y~~~~ 208 (236)
T 1tl2_A 188 FFSSVGTLFGVQ--GG--KFYEDYP 208 (236)
T ss_dssp EECTTSCEEEEE--TT--EEEEESC
T ss_pred EECCCCcEEEEe--CC--eEEecCC
Confidence 799999777665 66 4444433
|
| >1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A | Back alignment and structure |
|---|
Probab=96.41 E-value=0.35 Score=48.86 Aligned_cols=105 Identities=14% Similarity=0.082 Sum_probs=60.9
Q ss_pred CCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEeccc------ccccEEEEEECCC---CCEEEEec-C-----
Q psy12614 111 SGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDR------QQGRILCTAWHSS---GDYLVTGC-A----- 175 (708)
Q Consensus 111 ~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~------~~~~v~~~~~s~d---~~~l~~~~-~----- 175 (708)
-...+.|+|.|+|+++++-...+.|++++..++.......+.. ..+....|+|+|| +..|+.+. .
T Consensus 26 l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~ 105 (454)
T 1cru_A 26 LNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKS 105 (454)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC
T ss_pred CCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCC
Confidence 3467899999999877664333468888766565432223321 2456789999996 55554433 1
Q ss_pred -------C-eEEEEEcCCC--ce--EEEEEe-cccCCCCCceeEEEEEEccCCEEE
Q psy12614 176 -------A-AVRVWDIHKG--HA--IHKMSL-DKSSKFSKNTAVWCVAFCADFTII 218 (708)
Q Consensus 176 -------d-~i~iwd~~~~--~~--~~~~~~-~~~~~~~~~~~v~~~~~~~~~~l~ 218 (708)
. .|.-+++..+ .. ...+.. ... ........++|.|||.|.
T Consensus 106 ~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~---~~~H~~~~l~f~pDG~Ly 158 (454)
T 1cru_A 106 TDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPS---SKDHQSGRLVIGPDQKIY 158 (454)
T ss_dssp --CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECC---CSSCCEEEEEECTTSCEE
T ss_pred CccccccccEEEEEEECCCCCCcCCcEEEEEcCCC---CCCCCCCeEeECCCCeEE
Confidence 3 5666665432 11 111111 100 112347899999999743
|
| >2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli} | Back alignment and structure |
|---|
Probab=96.19 E-value=0.37 Score=47.08 Aligned_cols=229 Identities=10% Similarity=0.033 Sum_probs=108.7
Q ss_pred CCCEEEEEeC-CCcEEEEeCCC--CCeEEEEEecCC-CCCcEEEEEEe-CCEEEEEcC-C---------CcEEEEECCCC
Q psy12614 37 KSSRLAVSRA-DQSIEIWDISE--TPHVDRVFIGDP-LSNSIECLTWF-NDRLFSGGL-Q---------GFVNEYDMRRL 101 (708)
Q Consensus 37 ~~~~la~~~~-dg~v~iwd~~~--~~~~~~~~~~h~-~~~~v~~l~~~-~~~l~s~~~-d---------~~i~vwd~~~~ 101 (708)
++++.+.|+. ...+.+||..+ .+-. .+..-. ....-.+++.. +..++.|+. + ..+.+||..+.
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~--~~~~~p~~~R~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~ 96 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWT--ALAAFPGGPRDQATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTN 96 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEE--ECCCCTTCCCBSCEEEEETTEEEEECCEEECTTSCEEECCCEEEEETTTT
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCee--ECCCCCCCcCccceEEEECCEEEEEcCCCCCCCccceeeccEEEEeCCCC
Confidence 5666666654 35689999874 3322 222111 01222233333 666666665 2 46889998886
Q ss_pred eEeEEEeec-CCceEEEEEecCCCEEEEEeCC---------------------------------------CcEEEEEcc
Q psy12614 102 NIKSSTAVT-SGTCWCLSVHKKKRLLAAGTEQ---------------------------------------GHINLFQIS 141 (708)
Q Consensus 102 ~~~~~~~~~-~~~v~~~~~s~~~~~la~~~~d---------------------------------------~~i~iwd~~ 141 (708)
+-...-... .......+...+++.++.|+.+ ..+.+||..
T Consensus 97 ~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~ 176 (357)
T 2uvk_A 97 SWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPS 176 (357)
T ss_dssp EEEECSCCCSSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETT
T ss_pred cEEECCCCCCcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEeCC
Confidence 532211111 1111122222567777888754 578999999
Q ss_pred CCcEEEEEecccccccEEEEEECCCCCEEEEecC------C-eEEEEEc--CCCceEEEEEecccCCCCCceeEEEEEEc
Q psy12614 142 DEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCA------A-AVRVWDI--HKGHAIHKMSLDKSSKFSKNTAVWCVAFC 212 (708)
Q Consensus 142 ~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~------d-~i~iwd~--~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 212 (708)
+.+......+......-.+++.. +++.++.|+. . .+.++|+ .+.+-. .+..... ........+..
T Consensus 177 ~~~W~~~~~~p~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~-~~~~~~~----~~~~~~~~~~~ 250 (357)
T 2uvk_A 177 TQQWSYAGESPWYGTAGAAVVNK-GDKTWLINGEAKPGLRTDAVFELDFTGNNLKWN-KLAPVSS----PDGVAGGFAGI 250 (357)
T ss_dssp TTEEEEEEECSSCCCBSCEEEEE-TTEEEEECCEEETTEECCCEEEEECC---CEEE-ECCCSST----TTCCBSCEEEE
T ss_pred CCcEEECCCCCCCCcccccEEEE-CCEEEEEeeecCCCcccCceEEEEecCCCCcEE-ecCCCCC----CcccccceEEE
Confidence 88776433333111110222222 4556666653 2 5777876 333222 1111100 01111111222
Q ss_pred cCCE-EEEEcCC----------------------CcEEEEeCCCCe--eEEEeeccccCeEEEEEeCCCCEEEEEecCC-
Q psy12614 213 ADFT-IITGDSG----------------------GFVRFWDGKTGV--QWSDVKTHKKDILALTVSEDENYLYCAGVDP- 266 (708)
Q Consensus 213 ~~~~-l~~~~~d----------------------g~i~~wd~~~~~--~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg- 266 (708)
.+++ ++.|+.+ ..+.+||+.+.+ .+..+......-.+ ...+++.++.|+.++
T Consensus 251 ~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~--~~~~~~i~v~GG~~~~ 328 (357)
T 2uvk_A 251 SNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGRAYGVS--LPWNNSLLIIGGETAG 328 (357)
T ss_dssp ETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSCCBSSEE--EEETTEEEEEEEECGG
T ss_pred ECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCCCccccee--EEeCCEEEEEeeeCCC
Confidence 3555 5555532 257789987654 33333322222222 234677788888653
Q ss_pred -----eEEEEEccC
Q psy12614 267 -----TVVCFQRTR 275 (708)
Q Consensus 267 -----~i~iw~~~~ 275 (708)
.+.++++++
T Consensus 329 ~~~~~~v~~l~~~~ 342 (357)
T 2uvk_A 329 GKAVTDSVLITVKD 342 (357)
T ss_dssp GCEEEEEEEEEC-C
T ss_pred CCEeeeEEEEEEcC
Confidence 355567776
|
| >2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli} | Back alignment and structure |
|---|
Probab=96.13 E-value=0.26 Score=48.17 Aligned_cols=233 Identities=10% Similarity=-0.060 Sum_probs=112.1
Q ss_pred CCEEEEEcC-CCcEEEEECCC--Ce--EeEEEeecCCceEEEEEecCCCEEEEEeC-C---------CcEEEEEccCCcE
Q psy12614 81 NDRLFSGGL-QGFVNEYDMRR--LN--IKSSTAVTSGTCWCLSVHKKKRLLAAGTE-Q---------GHINLFQISDEGL 145 (708)
Q Consensus 81 ~~~l~s~~~-d~~i~vwd~~~--~~--~~~~~~~~~~~v~~~~~s~~~~~la~~~~-d---------~~i~iwd~~~~~~ 145 (708)
+..++.|+. ...+.++|..+ .+ .+..+......-.+++. -++++++.|+. + ..+.+||..+.+.
T Consensus 20 ~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W 98 (357)
T 2uvk_A 20 DTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAF-IDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSW 98 (357)
T ss_dssp TEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEE-ETTEEEEECCEEECTTSCEEECCCEEEEETTTTEE
T ss_pred CEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEE-ECCEEEEEcCCCCCCCccceeeccEEEEeCCCCcE
Confidence 444455553 35688889864 22 11111101111112222 25666677665 2 4689999998877
Q ss_pred EEEEecccccccEEEEEECCCCCEEEEecCC----------------------------------------eEEEEEcCC
Q psy12614 146 LYEKLLDRQQGRILCTAWHSSGDYLVTGCAA----------------------------------------AVRVWDIHK 185 (708)
Q Consensus 146 ~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d----------------------------------------~i~iwd~~~ 185 (708)
.....+......-.+++. .+++.++.|+.+ .+.+||..+
T Consensus 99 ~~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~ 177 (357)
T 2uvk_A 99 VKLMSHAPMGMAGHVTFV-HNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPST 177 (357)
T ss_dssp EECSCCCSSCCSSEEEEE-ETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTT
T ss_pred EECCCCCCcccccceEEE-ECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEeCCC
Confidence 532222211111112222 466677777642 688999887
Q ss_pred CceEEEEEecccCCCCCceeE-EEEEEccCCE-EEEEcC------CCcEEEEeC--CCCeeEE--EeeccccCeEEEEEe
Q psy12614 186 GHAIHKMSLDKSSKFSKNTAV-WCVAFCADFT-IITGDS------GGFVRFWDG--KTGVQWS--DVKTHKKDILALTVS 253 (708)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~v-~~~~~~~~~~-l~~~~~------dg~i~~wd~--~~~~~~~--~~~~~~~~i~~~~~s 253 (708)
.+-...-.... ...- .+++.. +++ ++.|+. ...+..||+ .+.+-.. .+..........+..
T Consensus 178 ~~W~~~~~~p~------~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~~~~~~~ 250 (357)
T 2uvk_A 178 QQWSYAGESPW------YGTAGAAVVNK-GDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVAGGFAGI 250 (357)
T ss_dssp TEEEEEEECSS------CCCBSCEEEEE-TTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTCCBSCEEEE
T ss_pred CcEEECCCCCC------CCcccccEEEE-CCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCcccccceEEE
Confidence 65443322221 1111 122222 555 555543 346777876 4433221 121111111111223
Q ss_pred CCCCEEEEEecC----------------------CeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe
Q psy12614 254 EDENYLYCAGVD----------------------PTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH 311 (708)
Q Consensus 254 ~~~~~l~~~~~d----------------------g~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~ 311 (708)
.+++.++.|+.+ ..+.+||+.+ ..|.....+......-.++.+.
T Consensus 251 ~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~--------------~~W~~~~~~p~~r~~~~~~~~~ 316 (357)
T 2uvk_A 251 SNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHN--------------GKWDKSGELSQGRAYGVSLPWN 316 (357)
T ss_dssp ETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC-----------------CEEEEECSSCCBSSEEEEET
T ss_pred ECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCC--------------CceeeCCCCCCCcccceeEEeC
Confidence 356666666632 2467888877 3576665554433333344444
Q ss_pred CCEEEEEcCCC------eEEEEeCCCCceee
Q psy12614 312 GNRLYSGGLDS------YLSLSYYPPKTLVK 336 (708)
Q Consensus 312 ~~~l~s~~~d~------~i~iw~~~~~~~~~ 336 (708)
+.+++.||.++ .+.++++++++...
T Consensus 317 ~~i~v~GG~~~~~~~~~~v~~l~~~~~~~~~ 347 (357)
T 2uvk_A 317 NSLLIIGGETAGGKAVTDSVLITVKDNKVTV 347 (357)
T ss_dssp TEEEEEEEECGGGCEEEEEEEEEC-CCSCEE
T ss_pred CEEEEEeeeCCCCCEeeeEEEEEEcCcEeEe
Confidence 77888888653 35555777766433
|
| >3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=95.92 E-value=1.2 Score=42.08 Aligned_cols=201 Identities=9% Similarity=0.020 Sum_probs=107.1
Q ss_pred EEEEEeCCEEEEEcCC--------------CeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEEEc---CCeEEEEE
Q psy12614 306 KSLALHGNRLYSGGLD--------------SYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQY---TSHLELWS 368 (708)
Q Consensus 306 ~~l~~~~~~l~s~~~d--------------~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~---~~~i~i~~ 368 (708)
..+...+++|+-.... ..|+..++++.....+. ......++++++.|+... ++.-.||.
T Consensus 58 ~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~l~----~~~~~~~s~~g~~Iy~~~~~~~~~~~Iy~ 133 (302)
T 3s25_A 58 MYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTVLD----PDPCIYASLIGNYIYYLHYDTQTATSLYR 133 (302)
T ss_dssp EEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEEEE----CSCEEEEEEETTEEEEEEESSSSCEEEEE
T ss_pred eeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceEee----cCCccEEEEeCCEEEEEeecCCCCceEEE
Confidence 3444447777665442 46777777776543333 223457888999888754 44444554
Q ss_pred ecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEEEcCCceEEEEEEecCCcceeEEeecCCc
Q psy12614 369 LGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYSTESCVRLHSLDLDGDKPQISRIKNLPA 448 (708)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~ 448 (708)
+.... . ....+. .+. + .+++++|+.|+..+++.-.|+.+...... .+.+ +.+
T Consensus 134 ~~~dG-----------------s--~~~~lt-~~~--~--~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~--~~~l--~~~ 185 (302)
T 3s25_A 134 IRIDG-----------------E--EKKKIK-NHY--L--FTCNTSDRYFYYNNPKNGQLYRYDTASQS--EALF--YDC 185 (302)
T ss_dssp EETTS-----------------C--CCEEEE-SSC--C--CCSEEETTEEEEECTTTCCEEEEETTTTE--EEEE--ECS
T ss_pred EECCC-----------------C--CeEEEe-CCC--c--eEeeEECCEEEEEeCCCceEEEEECCCCC--EEEE--eCC
Confidence 44211 0 111222 111 1 46788999999765454455555543332 2222 122
Q ss_pred ccccceeEEEEEecCCCeEEEEecCC-c-EEEecCCCeEEEEEecCCCCCccCcceEEEEECCCCcEEEEEec--CCeEE
Q psy12614 449 PLFKSIFTHVLISADSTLLLAVSLNG-P-LYIIDLSSLEIKYCVDPYKSNLMSDVISLVQMSECKQYIVCADR--KSHVV 524 (708)
Q Consensus 449 ~~~~~~i~~~~~s~d~~~l~~~~~dg-~-i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~--d~~i~ 524 (708)
.. . ..++|++.+|+.....+ . |+..+..... ...+. ...+ ..|+|++++|+.++. .+.|.
T Consensus 186 ~~---~---~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~-~~~Lt-------~~~~--~~~~~~g~~Iy~~~~~~~~~i~ 249 (302)
T 3s25_A 186 NC---Y---KPVVLDDTNVYYMDVNRDNAIVHVNINNPN-PVVLT-------EANI--EHYNVYGSLIFYQRGGDNPALC 249 (302)
T ss_dssp CE---E---EEEEEETTEEEEEEGGGTTEEEEECSSSCC-CEECS-------CSCE--EEEEEETTEEEEEECSSSCEEE
T ss_pred Cc---c---ceeeecCCEEEEEEcCCCcEEEEEECCCCC-eEEEe-------CCCc--ceEEECCCEEEEEECCCCcEEE
Confidence 11 1 34679999998876554 3 7777643222 23332 2233 348889999987642 35677
Q ss_pred EEECC-ceeeecCCCCCCceEEEEcCCCCEEEEEe
Q psy12614 525 IWKNG-QHHASLPRYRKPSTAMAIHPTLSTLVTVY 558 (708)
Q Consensus 525 iw~~~-~~~~~~~~~~~~v~~l~~s~d~~~l~~~~ 558 (708)
.-+++ +....+... .+. .+++.+.+|+-..
T Consensus 250 ~~~~DG~~r~~l~~~--~~~--~i~i~~d~Iy~td 280 (302)
T 3s25_A 250 VVKNDGTGFKELAKG--EFC--NINVTSQYVYFTD 280 (302)
T ss_dssp EEETTSCCCEEEEES--CEE--EEEECSSEEEEEE
T ss_pred EEECCCCccEEeeCC--ccc--eEEEeCCEEEEEE
Confidence 77776 333333221 223 3444566666554
|
| >1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A | Back alignment and structure |
|---|
Probab=95.71 E-value=0.98 Score=51.38 Aligned_cols=254 Identities=11% Similarity=0.073 Sum_probs=141.5
Q ss_pred CCCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEEEcCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEE
Q psy12614 320 LDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMS 399 (708)
Q Consensus 320 ~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (708)
....|.|-|+.+..-.. . ..-...+..++|..++++......++++++++.. ++....
T Consensus 46 ~~~~vvIidl~~~~~~~-r-rpi~AdsAIMnP~~~iiALrag~~lQiFnl~~k~--------------------klks~~ 103 (1630)
T 1xi4_A 46 EQAQVVIIDMNDPSNPI-R-RPISADSAIMNPASKVIALKAGKTLQIFNIEMKS--------------------KMKAHT 103 (1630)
T ss_pred CCceEEEEECCCCCCcc-c-ccccchhhccCCCcceEEEecCCeEEEeehHHhh--------------------hhcccc
Confidence 34478888887754111 0 1223456778899999999889999999998865 222221
Q ss_pred ecCCCceEEEEeCCCCcEEEEEcCCceEEEEEEecCCcceeEEeecCCcccc--cceeEEEEEecCCCeEEEEec---CC
Q psy12614 400 AVNNATIRCSVVSNDGKYVAYSTESCVRLHSLDLDGDKPQISRIKNLPAPLF--KSIFTHVLISADSTLLLAVSL---NG 474 (708)
Q Consensus 400 ~~~~~~i~~~~~s~~g~~l~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~--~~~i~~~~~s~d~~~l~~~~~---dg 474 (708)
....|.--.|-.+ +.|+.-++..|+-|++........+ +..|.. ...|..-..+++.++++..+- +|
T Consensus 104 --~~e~VvfWkWis~-~~l~lVT~~aVyHW~~~~~s~P~k~-----fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~ 175 (1630)
T 1xi4_A 104 --MTDDVTFWKWISL-NTVALVTDNAVYHWSMEGESQPVKM-----FDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQN 175 (1630)
T ss_pred --cCCCceEEEecCC-CeeEEEcCCeEEEeccCCCCccHHH-----HhcchhcccCeeEEeeeCCCCCeEEEEeeccCCC
Confidence 1234444455433 3566667778999999642221111 333322 445666778889999886553 23
Q ss_pred c------EEEecCCCeEEEEEecCCCCCccCcceEEEEEC---CCCcEEEEEec---CCeEEEEECCce---ee------
Q psy12614 475 P------LYIIDLSSLEIKYCVDPYKSNLMSDVISLVQMS---ECKQYIVCADR---KSHVVIWKNGQH---HA------ 533 (708)
Q Consensus 475 ~------i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s---~~~~~l~~~~~---d~~i~iw~~~~~---~~------ 533 (708)
. +|..+.+.. +.+ .|| ...-..+... +....++.+.. .+.++|-++... ..
T Consensus 176 ~v~G~mQLyS~er~~s---Q~i---egh--a~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~ 247 (1630)
T 1xi4_A 176 RVVGAMQLYSVDRKVS---QPI---EGH--AASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKA 247 (1630)
T ss_pred cccceeeeeecccccc---hhh---hHh--HhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCcccc
Confidence 2 666654421 222 233 1111111111 11223333321 268888888632 00
Q ss_pred ---ecCC--CCCCceEEEEcCCCCEEEEEecCCcEEEEEcCCCCCCchhhhhhccCchhhhcCCCCeeEEEeCCCCCceE
Q psy12614 534 ---SLPR--YRKPSTAMAIHPTLSTLVTVYSDHRIVEFDLNRKAFTTFSRKLETNHPNEWLSRQLPVLGIEFDPQDSSLI 608 (708)
Q Consensus 534 ---~~~~--~~~~v~~l~~s~d~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~~~~l~ 608 (708)
.++. -..-+.++..|+.-..+...+.-|.|.+||++++.++- ..+ -...+|.-.+-.....=++
T Consensus 248 ~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~---------~~r--is~~~iF~~~~~~~~~g~~ 316 (1630)
T 1xi4_A 248 VDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIY---------MNR--ISGETIFVTAPHEATAGII 316 (1630)
T ss_pred ccccCCcccccCcceEEEeccccCEEEEEecCceEEEEecccchhhh---------hcc--ccCCceEEeccCCCCCceE
Confidence 1111 23455678888888889999999999999999998771 111 1233444434333333345
Q ss_pred EEEcCeeEEEEecC
Q psy12614 609 YLMDDSALCVINKN 622 (708)
Q Consensus 609 ~~~~d~~i~~wd~~ 622 (708)
.....|.|.-..++
T Consensus 317 ~vnr~G~vl~v~v~ 330 (1630)
T 1xi4_A 317 GVNRKGQVLSVCVE 330 (1630)
T ss_pred EEcCCceEEEEEEc
Confidence 55566666555554
|
| >2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A* | Back alignment and structure |
|---|
Probab=95.54 E-value=0.7 Score=49.76 Aligned_cols=195 Identities=10% Similarity=0.004 Sum_probs=105.7
Q ss_pred CCCCEEEEEeCC----CcEEEEeCCCCCeEEEEEe-------cCCCCCcEEEEEE--eCCEEEEEcCC------CcEEEE
Q psy12614 36 PKSSRLAVSRAD----QSIEIWDISETPHVDRVFI-------GDPLSNSIECLTW--FNDRLFSGGLQ------GFVNEY 96 (708)
Q Consensus 36 ~~~~~la~~~~d----g~v~iwd~~~~~~~~~~~~-------~h~~~~~v~~l~~--~~~~l~s~~~d------~~i~vw 96 (708)
.++.+++.|+.+ ..+.+||..+++.....+. ... ..-.++.+ .+..++.||.+ +.+.+|
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R--~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~y 473 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVAR--MCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIF 473 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCC--BSCEEEEETTTTEEEEECCBSSTTCBCCCCEEE
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccc--cceEEEEEccCCEEEEEcCCCCCCCccccEEEE
Confidence 566777777643 4689999988765442211 111 22344455 45555666643 357889
Q ss_pred ECCCCeEeEEEeec-CCceEEEEEecCCCEEEEEeCCC--cEEEEEccCCcEEEEEe---cccccccEEEEEECCC-CCE
Q psy12614 97 DMRRLNIKSSTAVT-SGTCWCLSVHKKKRLLAAGTEQG--HINLFQISDEGLLYEKL---LDRQQGRILCTAWHSS-GDY 169 (708)
Q Consensus 97 d~~~~~~~~~~~~~-~~~v~~~~~s~~~~~la~~~~d~--~i~iwd~~~~~~~~~~~---~~~~~~~v~~~~~s~d-~~~ 169 (708)
|..+.+-...-... ...-.+++...+++.++.|+.++ .+.+||..+........ .......-.++.+..+ ++.
T Consensus 474 d~~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~i 553 (695)
T 2zwa_A 474 DMKTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQG 553 (695)
T ss_dssp ETTTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEE
T ss_pred eCCCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEE
Confidence 98886432211111 11112233334788888887654 69999999888753221 1111122233555555 566
Q ss_pred EEEecC--------CeEEEEEcCCCce-----EEEEEe-cccCCCCCceeEEEEEEccCCE-EEEEcC--------CCcE
Q psy12614 170 LVTGCA--------AAVRVWDIHKGHA-----IHKMSL-DKSSKFSKNTAVWCVAFCADFT-IITGDS--------GGFV 226 (708)
Q Consensus 170 l~~~~~--------d~i~iwd~~~~~~-----~~~~~~-~~~~~~~~~~~v~~~~~~~~~~-l~~~~~--------dg~i 226 (708)
++.|+. +.+.+||+.+... ...+.. ... ...-.+++...+++ ++.|+. ...+
T Consensus 554 yv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~-----~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v 628 (695)
T 2zwa_A 554 IILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLF-----QRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSI 628 (695)
T ss_dssp EEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGG-----CCBSCEEEEEETTEEEEECCBCSSCCCCTTTSE
T ss_pred EEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCC-----CcccceEEEeCCCEEEEECCccCCCCCCCCCeE
Confidence 667765 1588999988772 223322 111 11111223334365 556653 3569
Q ss_pred EEEeCCCCeeE
Q psy12614 227 RFWDGKTGVQW 237 (708)
Q Consensus 227 ~~wd~~~~~~~ 237 (708)
.+||+.+++-.
T Consensus 629 ~~yd~~t~~W~ 639 (695)
T 2zwa_A 629 ISLDPLSETLT 639 (695)
T ss_dssp EEEETTTTEEE
T ss_pred EEEECCCCeEE
Confidence 99999887644
|
| >2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=95.41 E-value=0.024 Score=54.17 Aligned_cols=191 Identities=15% Similarity=0.105 Sum_probs=104.5
Q ss_pred CCEEEEEcCCCcEEEEECCCCeEeEEEeec-CCceEEEEE--ec-CCCEEEEE-eCCCcEEEEEccCCcEEEEEecccc-
Q psy12614 81 NDRLFSGGLQGFVNEYDMRRLNIKSSTAVT-SGTCWCLSV--HK-KKRLLAAG-TEQGHINLFQISDEGLLYEKLLDRQ- 154 (708)
Q Consensus 81 ~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~-~~~v~~~~~--s~-~~~~la~~-~~d~~i~iwd~~~~~~~~~~~~~~~- 154 (708)
++.++.++.||.|.-.|.++|+.+.+++.. ..++....- .+ ++..++.. +.||.|..++..+|...........
T Consensus 10 ~~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv 89 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLV 89 (339)
T ss_dssp EEEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHH
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccce
Confidence 568899999999999999999999998754 122222110 01 22333333 5799999999988866533332211
Q ss_pred -cccEEE---EEE-----CCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCC-CCCceeEEEEE---E---ccCCEE
Q psy12614 155 -QGRILC---TAW-----HSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSK-FSKNTAVWCVA---F---CADFTI 217 (708)
Q Consensus 155 -~~~v~~---~~~-----s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~-~~~~~~v~~~~---~---~~~~~l 217 (708)
..++.. ... +..+..+++++.+ .+...|+.+|+.+..+....... +. .....|.. + ..++.+
T Consensus 90 ~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~-~~~e~~~~~~d~~~d~~~~~v 168 (339)
T 2be1_A 90 STSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFG-SQSVDCSPEEKIKLQECENMI 168 (339)
T ss_dssp TTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC---------------------CCEE
T ss_pred eccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCCCccccc-ccccccccccccccccCCCeE
Confidence 111211 000 0145578888888 99999999999999987542100 00 00001111 1 112346
Q ss_pred EEEcCCCcEEEEeCCCCeeEEEe-----eccccC--e-EEEEEeCCCCEEEEEecCCeEEEEEccC
Q psy12614 218 ITGDSGGFVRFWDGKTGVQWSDV-----KTHKKD--I-LALTVSEDENYLYCAGVDPTVVCFQRTR 275 (708)
Q Consensus 218 ~~~~~dg~i~~wd~~~~~~~~~~-----~~~~~~--i-~~~~~s~~~~~l~~~~~dg~i~iw~~~~ 275 (708)
+.+..+..+.+.+ ++|+ +..+ ...... + .....+.|+.+ +.++.||.|.-+|..+
T Consensus 169 ~ig~~~y~v~~~~-~sG~-~W~~~~s~~~~~~~~~~~~~~~~~s~Dg~~-~~~~~dg~v~A~d~~~ 231 (339)
T 2be1_A 169 VIGKTIFELGIHS-YDGA-SYNVTYSTWQQNVLDVPLALQNTFSKDGMC-IAPFRDKSLLASDLDF 231 (339)
T ss_dssp EEEEEEEECEECC-TTSC-CCCCEEEEEECCTTTHHHHTTCSSCSSSCC-EEEETTTEEEEECSTT
T ss_pred EEecceEEEEEEC-CCCC-eEEEecccccccccccccccccccccCCcE-EEECCCCEEEEEECCC
Confidence 6666666666655 3443 1111 110000 0 00001234655 5578899999999888
|
| >3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=95.38 E-value=1.9 Score=40.67 Aligned_cols=207 Identities=7% Similarity=-0.008 Sum_probs=116.3
Q ss_pred cCCCCEEEEEeC--CCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEeCCEEEEEcCC--------------CcEEEEEC
Q psy12614 35 EPKSSRLAVSRA--DQSIEIWDISETPHVDRVFIGDPLSNSIECLTWFNDRLFSGGLQ--------------GFVNEYDM 98 (708)
Q Consensus 35 s~~~~~la~~~~--dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~~~~l~s~~~d--------------~~i~vwd~ 98 (708)
++++.+|..... ++.|...+.+..... .+.. ..+..+...+++|+-+... ..|+..++
T Consensus 22 ~~~g~~iy~~n~~d~~~ly~~~~dg~~~~--~l~~----~~~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~ 95 (302)
T 3s25_A 22 CESDGEVFFSNTNDNGRLYAMNIDGSNIH--KLSN----DTAMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKR 95 (302)
T ss_dssp EEETTEEEEEEGGGTTEEEEEETTSCSCE--EEEE----EEEEEEEECSSEEEEEEECC------CCSSCCSEEEEEEET
T ss_pred EEeCCEEEEEeCCCCceEEEEcCCCCCCE--EccC----CceeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeC
Confidence 457778777642 455666665544432 2322 2233333337777765432 46788888
Q ss_pred CCCeEeEEEeecCCceEEEEEecCCCEEEEEe----CCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEec
Q psy12614 99 RRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGT----EQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGC 174 (708)
Q Consensus 99 ~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~----~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~ 174 (708)
..++... +.. .. +..|++++++|+... ....|+..++.+.... .+..+.. ..|+++++.|+-.+
T Consensus 96 dg~~~~~-l~~--~~--~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~~---~lt~~~~----~~~~~~g~~iy~t~ 163 (302)
T 3s25_A 96 NGHGSTV-LDP--DP--CIYASLIGNYIYYLHYDTQTATSLYRIRIDGEEKK---KIKNHYL----FTCNTSDRYFYYNN 163 (302)
T ss_dssp TSCCCEE-EEC--SC--EEEEEEETTEEEEEEESSSSCEEEEEEETTSCCCE---EEESSCC----CCSEEETTEEEEEC
T ss_pred CCCcceE-eec--CC--ccEEEEeCCEEEEEeecCCCCceEEEEECCCCCeE---EEeCCCc----eEeeEECCEEEEEe
Confidence 7765332 221 11 237888999998776 2445666666655442 2333322 45678899998766
Q ss_pred C-C-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCC--CcEEEEeCCCCeeEEEeeccccCeEE
Q psy12614 175 A-A-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSG--GFVRFWDGKTGVQWSDVKTHKKDILA 249 (708)
Q Consensus 175 ~-d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~d--g~i~~wd~~~~~~~~~~~~~~~~i~~ 249 (708)
. . .|.+-++..+... .+... .. . ..+.|++. ++-.... ..|..-++.... ...+.. ..+
T Consensus 164 ~g~~~Iy~~~l~g~~~~-~l~~~-------~~--~-~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~-~~~Lt~--~~~-- 227 (302)
T 3s25_A 164 PKNGQLYRYDTASQSEA-LFYDC-------NC--Y-KPVVLDDTNVYYMDVNRDNAIVHVNINNPN-PVVLTE--ANI-- 227 (302)
T ss_dssp TTTCCEEEEETTTTEEE-EEECS-------CE--E-EEEEEETTEEEEEEGGGTTEEEEECSSSCC-CEECSC--SCE--
T ss_pred CCCceEEEEECCCCCEE-EEeCC-------Cc--c-ceeeecCCEEEEEEcCCCcEEEEEECCCCC-eEEEeC--CCc--
Confidence 5 4 8999998665543 33211 11 1 23557764 4443332 367777765444 333432 233
Q ss_pred EEEeCCCCEEEEEec--CCeEEEEEccC
Q psy12614 250 LTVSEDENYLYCAGV--DPTVVCFQRTR 275 (708)
Q Consensus 250 ~~~s~~~~~l~~~~~--dg~i~iw~~~~ 275 (708)
..++|++++|+.+.. .+.|..-++..
T Consensus 228 ~~~~~~g~~Iy~~~~~~~~~i~~~~~DG 255 (302)
T 3s25_A 228 EHYNVYGSLIFYQRGGDNPALCVVKNDG 255 (302)
T ss_dssp EEEEEETTEEEEEECSSSCEEEEEETTS
T ss_pred ceEEECCCEEEEEECCCCcEEEEEECCC
Confidence 347888988886633 35666666664
|
| >2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A* | Back alignment and structure |
|---|
Probab=95.14 E-value=1.7 Score=46.68 Aligned_cols=203 Identities=10% Similarity=0.043 Sum_probs=108.3
Q ss_pred cCCCEEEEEeCC----CcEEEEEccCCcEEEEE-e-----cccccccEEEEEECCCCCEEEEecCC-------eEEEEEc
Q psy12614 121 KKKRLLAAGTEQ----GHINLFQISDEGLLYEK-L-----LDRQQGRILCTAWHSSGDYLVTGCAA-------AVRVWDI 183 (708)
Q Consensus 121 ~~~~~la~~~~d----~~i~iwd~~~~~~~~~~-~-----~~~~~~~v~~~~~s~d~~~l~~~~~d-------~i~iwd~ 183 (708)
.++..++.|+.+ ..+.+||..+++..... . .......-..+.+..+++.++.|+.+ .+.+||.
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~ 475 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM 475 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeC
Confidence 456677777643 46889999988876433 2 11111112233332267777777642 4788898
Q ss_pred CCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCC--cEEEEeCCCCeeEEEe-----eccccCeEEEEEeCC
Q psy12614 184 HKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGG--FVRFWDGKTGVQWSDV-----KTHKKDILALTVSED 255 (708)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg--~i~~wd~~~~~~~~~~-----~~~~~~i~~~~~s~~ 255 (708)
.+.+-...-.... ...-.+++...+++ ++.|+.++ .+.+||..+++-...- ........++.+..+
T Consensus 476 ~t~~W~~~~~~p~------~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~ 549 (695)
T 2zwa_A 476 KTREWSMIKSLSH------TRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPV 549 (695)
T ss_dssp TTTEEEECCCCSB------CCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETT
T ss_pred CCCcEEECCCCCC------CcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCC
Confidence 7754332211110 11112333333665 66666544 7999999877543221 112222334556655
Q ss_pred -CCEEEEEec--C-----CeEEEEEccCCcccccCCCCCCCCcceEEeEEEe-ccccceEEEEEe-CCEEEEEcC-----
Q psy12614 256 -ENYLYCAGV--D-----PTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRV-IHEGDVKSLALH-GNRLYSGGL----- 320 (708)
Q Consensus 256 -~~~l~~~~~--d-----g~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~v~~l~~~-~~~l~s~~~----- 320 (708)
++.++.|+. + ..+..||+.+ ..-.....|....... ........+.+. +.+++.||.
T Consensus 550 ~~~iyv~GG~~~~~~~~~~~v~~yd~~~--------~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~ 621 (695)
T 2zwa_A 550 SKQGIILGGGFMDQTTVSDKAIIFKYDA--------ENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGL 621 (695)
T ss_dssp TTEEEEECCBCTTSSCBCCEEEEEEECT--------TCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCC
T ss_pred CCEEEEECCcCCCCCeeeCcEEEEEccC--------CccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCC
Confidence 556666765 2 4588999887 3100011255444321 112223444555 667777774
Q ss_pred ---CCeEEEEeCCCCceeec
Q psy12614 321 ---DSYLSLSYYPPKTLVKY 337 (708)
Q Consensus 321 ---d~~i~iw~~~~~~~~~~ 337 (708)
...+.+||+.+......
T Consensus 622 ~~~~~~v~~yd~~t~~W~~~ 641 (695)
T 2zwa_A 622 FDRTNSIISLDPLSETLTSI 641 (695)
T ss_dssp CCTTTSEEEEETTTTEEEEC
T ss_pred CCCCCeEEEEECCCCeEEEe
Confidence 34688999988875543
|
| >2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A | Back alignment and structure |
|---|
Probab=94.67 E-value=4.1 Score=40.98 Aligned_cols=30 Identities=13% Similarity=0.087 Sum_probs=24.0
Q ss_pred CCCCceEEEEcCCc--EEEEEcCCeEEEEEec
Q psy12614 341 LAQSTPVSLAKDIQ--HVLLQYTSHLELWSLG 370 (708)
Q Consensus 341 ~~~~~~~~~s~~~~--~l~~~~~~~i~i~~~~ 370 (708)
+..+..+++.|+|. ++++...+.|++++..
T Consensus 13 L~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~ 44 (463)
T 2wg3_C 13 LRQPVGALHSGDGSQRLFILEKEGYVKILTPE 44 (463)
T ss_dssp ESSEEEEECCSSSSCCEEEEETTTEEEEECTT
T ss_pred CCCceEEEECCCCCeEEEEEeCCceEEEEeCC
Confidence 45667899999985 8888888999988643
|
| >3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B | Back alignment and structure |
|---|
Probab=92.51 E-value=2.2 Score=39.66 Aligned_cols=221 Identities=12% Similarity=0.026 Sum_probs=115.9
Q ss_pred cEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEeCCEEEEEcCCCcEEEEECCCCeEeEEE
Q psy12614 28 VINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWFNDRLFSGGLQGFVNEYDMRRLNIKSST 107 (708)
Q Consensus 28 ~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~ 107 (708)
.|..++..... .++. . ||.|..|-....-.+. .-... ...|..++......+... ||.|..|-......+..-
T Consensus 25 ~i~~ia~G~~h-~~~l-~-~G~v~~wG~n~~Gqlg-~p~~~--~~~i~~ia~G~~hs~~l~-~G~v~~wG~n~~Gqlg~P 97 (282)
T 3qhy_B 25 GVDAIAGGYFH-GLAL-K-GGKVLGWGANLNGQLT-MPAAT--QSGVDAIAAGNYHSLALK-DGEVIAWGGNEDGQTTVP 97 (282)
T ss_dssp SCCEEEECSSE-EEEE-E-TTEEEEEECCSSSTTS-CCGGG--GSCCCEEEECSSEEEEEE-TTEEEEEECCTTSTTCCC
T ss_pred CCcEEEeCCCe-EEEE-E-CCEEEEEeCCCCCCCC-CCccC--CCCEEEEEeCCCEEEEEE-CCEEEEeeCCCCCCCCCC
Confidence 46666665442 2333 4 8889888766532221 10111 246777777744333334 999999976542211111
Q ss_pred eecCCceEEEEEecCCCEEEEEeCCCcEEEEEccC-CcEEEEEecccccccEEEEEECCCCCEEEEecCCeEEEEEcCCC
Q psy12614 108 AVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISD-EGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAAAVRVWDIHKG 186 (708)
Q Consensus 108 ~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~i~iwd~~~~ 186 (708)
..-...|..++...+ ..++-. +|.|+.|-... +++- ........|..++...+...++ ..+.|..|-....
T Consensus 98 ~~~~~~v~~ia~G~~--hs~al~-~G~v~~wG~n~~gqlg---~~~~~~~~i~~i~~G~~~~~~l--~~G~v~~wG~n~~ 169 (282)
T 3qhy_B 98 AEARSGVDAIAAGAW--ASYALK-DGKVIAWGDDSDGQTT---VPAEAQSGVTALDGGVYTALAV--KNGGVIAWGDNYF 169 (282)
T ss_dssp GGGSSSEEEEEEETT--EEEEEE-TTEEEEEECCTTSTTS---CCGGGGSSEEEEEECSSEEEEE--ETTEEEEEECCTT
T ss_pred cccCCCeEEEECcCC--EEEEEe-CCeEEEecCCCCCcCC---CCccCCCCeEEEEcccCEEEEE--ECCEEEEecCCCC
Confidence 111245777766554 333345 89999997654 2221 1112234577776654332222 3238888876542
Q ss_pred ceEEEEEecccCCCCCceeEEEEEEccCCEEEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEecCC
Q psy12614 187 HAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDP 266 (708)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg 266 (708)
..+. ... .....|..++...+..++. .+|.|+.|=....-.+..-......|..++..... .++.. ||
T Consensus 170 gqlg-~p~------~~~~~v~~i~~G~~hs~al--~~G~v~~wG~n~~gqlg~p~~~~~~v~~i~~G~~h-~~al~--~g 237 (282)
T 3qhy_B 170 GQTT-VPA------EAQSGVDDVAGGIFHSLAL--KDGKVIAWGDNRYKQTTVPTEALSGVSAIASGEWY-SLALK--NG 237 (282)
T ss_dssp STTS-CCG------GGGSSEEEEEECSSEEEEE--ETTEEEEEECCTTSTTCCCGGGGSSCCEEEECSSC-EEEEE--TT
T ss_pred CCCC-Cce------ecCCCeEEEEecCCEEEEE--ECCeEEEEECCCCCCCCCCcccCCCceEEEcCCCE-EEEEE--CC
Confidence 2211 111 1134577777665555555 58999999654322211111123456677655443 33333 89
Q ss_pred eEEEEEccC
Q psy12614 267 TVVCFQRTR 275 (708)
Q Consensus 267 ~i~iw~~~~ 275 (708)
.++.|-...
T Consensus 238 ~v~~wG~n~ 246 (282)
T 3qhy_B 238 KVIAWGSSR 246 (282)
T ss_dssp EEEEESTTC
T ss_pred EEEEecCCC
Confidence 999996654
|
| >3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A | Back alignment and structure |
|---|
Probab=92.41 E-value=10 Score=38.45 Aligned_cols=216 Identities=14% Similarity=0.114 Sum_probs=127.5
Q ss_pred CCCEEEEEe-CCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe----CCEEEEEcC-------CCcEE----------
Q psy12614 37 KSSRLAVSR-ADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF----NDRLFSGGL-------QGFVN---------- 94 (708)
Q Consensus 37 ~~~~la~~~-~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~----~~~l~s~~~-------d~~i~---------- 94 (708)
||+||.+-. .+..|-.-++..-+.-. +++-.. ...+.+++|. -.+++.+++ ||...
T Consensus 141 DGrylfiNdkan~RvAri~l~~~~~d~-Ii~iPn-~~~~Hg~~~~~~p~T~yv~~~~e~~~P~pndg~~~~~~~~~~y~~ 218 (638)
T 3sbq_A 141 DGKYLFINDKANSRVARIRLDIMKCDK-MITVPN-VQAIHGLRLQKVPHTKYVFANAEFIIPHPNDGKVFDLQDENSYTM 218 (638)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEE-EEECTT-CSCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCTTSTTEEEE
T ss_pred eeEEEEEecCCCcceEEEECCcEeece-eEeCCC-CcCcccccccccCCccEEEecceeeccCCCCCcccccCChhhceE
Confidence 789998876 46778888988876655 333222 3789999887 556766653 33321
Q ss_pred --EEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCC---------------cEEEEEcc-------CCcEEE---
Q psy12614 95 --EYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQG---------------HINLFQIS-------DEGLLY--- 147 (708)
Q Consensus 95 --vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~---------------~i~iwd~~-------~~~~~~--- 147 (708)
..|.++.+....+.. .+....+...++|.+.++.+.+. .+.++++. .|+...
T Consensus 219 f~~iD~~tm~v~~Qv~v-~gnld~~~~~~~g~~af~t~yNsE~~~~l~em~~~e~D~~~vfn~~~ie~~vk~G~~~~~~g 297 (638)
T 3sbq_A 219 YNAIDAETMEMAFQVIV-DGNLDNTDADYTGRFAAATCYNSEKAFDLGGMMRNERDWVVVFDIHAVEAAVKAGDFITLGD 297 (638)
T ss_dssp EEEEETTTCSEEEEEEE-SSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSCEEEEEEEHHHHHHHHHTTCCBCCTT
T ss_pred EEEEcCCccEEEEEEEc-CCChhhcCCCCCCCEEEEeeeccccCcChhhcCcccccEEEEecHHHHHHHHhcCCeEEECC
Confidence 123333333222221 23344456677788877766432 25666653 111100
Q ss_pred --EEeccc---------------ccccEEEEEECCCCCEEEEecCC--eEEEEEcCCC------ce-------EEEEEec
Q psy12614 148 --EKLLDR---------------QQGRILCTAWHSSGDYLVTGCAA--AVRVWDIHKG------HA-------IHKMSLD 195 (708)
Q Consensus 148 --~~~~~~---------------~~~~v~~~~~s~d~~~l~~~~~d--~i~iwd~~~~------~~-------~~~~~~~ 195 (708)
...+.+ -......+.++|||++++.++.- ++.++|++.. +. ......
T Consensus 298 ~gv~ViD~~~~~~~~~~~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~- 376 (638)
T 3sbq_A 298 SKTPVLDGRKKDGKDSKFTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPEL- 376 (638)
T ss_dssp CCCCEEECSCBTTBCCSSEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBC-
T ss_pred CCeeEEccccccccCCceEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccC-
Confidence 011111 11233457789999999988765 9999998742 11 222221
Q ss_pred ccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCC----------eeEEEeeccccCeEEEEE------eCCCCE
Q psy12614 196 KSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTG----------VQWSDVKTHKKDILALTV------SEDENY 258 (708)
Q Consensus 196 ~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~----------~~~~~~~~~~~~i~~~~~------s~~~~~ 258 (708)
.......+|.++|. +.+.--|.+|.-|++... ..+..+.-|-.+- -+.. .+||++
T Consensus 377 -------GlGPlHt~Fd~~G~aYTtlfidSqvvkWni~~a~~~~~g~~~~~v~~k~dv~YqpG-H~~~~~get~~~dGk~ 448 (638)
T 3sbq_A 377 -------GLGPLHTTFDGRGNAYTTLFIDSQVVKWNMEEAVRAYKGEKVNYIKQKLDVHYQPG-HLHASLCETNEADGKW 448 (638)
T ss_dssp -------CSCEEEEEECSSSEEEEEETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEE-EEEETTTTSTTCCSCE
T ss_pred -------CCcccEEEECCCCceEeeeeecceEEEEeccHHHHHhcCccCCeeeeccccccCCc-ccccCCCccCCCCccE
Confidence 34567889999997 556678999999998653 3455555443322 2222 578999
Q ss_pred EEEEec
Q psy12614 259 LYCAGV 264 (708)
Q Consensus 259 l~~~~~ 264 (708)
|++...
T Consensus 449 lv~lnK 454 (638)
T 3sbq_A 449 LVALSK 454 (638)
T ss_dssp EEEEES
T ss_pred EEEecc
Confidence 998753
|
| >4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi} | Back alignment and structure |
|---|
Probab=92.33 E-value=14 Score=39.62 Aligned_cols=234 Identities=10% Similarity=0.052 Sum_probs=123.2
Q ss_pred EEEEE-EcCCCCEEEEE-eCC----CcEEEEeCCCCCeEEEEEecCCCCC------cEEEEEEe-CCEEEEEc-------
Q psy12614 29 INCIA-CEPKSSRLAVS-RAD----QSIEIWDISETPHVDRVFIGDPLSN------SIECLTWF-NDRLFSGG------- 88 (708)
Q Consensus 29 v~~~~-~s~~~~~la~~-~~d----g~v~iwd~~~~~~~~~~~~~h~~~~------~v~~l~~~-~~~l~s~~------- 88 (708)
...+. ++|++++++.+ +.. ..|+++|+.+++.+.-.+. ..... ....++|. ++.++.+.
T Consensus 131 ~~g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~-~~~k~~~~~~~~~~~~~W~d~~~~~~~~~~~~~~~ 209 (711)
T 4hvt_A 131 YRGVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFE-PITNSGKLLEGKFTYPTWINKDTIIFNLVLHKNEI 209 (711)
T ss_dssp EEEEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSC-CBCTTCCBCCEETCCEEEEETTEEEECCCCSTTCB
T ss_pred EeceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcc-cccccccccccccceeeEECCCEEEEEeCCCCCCc
Confidence 44555 89999998875 222 3599999999876532222 11001 11344777 55555442
Q ss_pred ----CCCcEEEEECCCCe--EeEEEeecCCce-EEEEEecCCCE-----EEEEeC---CCcEEEEEccC--CcEEEEEec
Q psy12614 89 ----LQGFVNEYDMRRLN--IKSSTAVTSGTC-WCLSVHKKKRL-----LAAGTE---QGHINLFQISD--EGLLYEKLL 151 (708)
Q Consensus 89 ----~d~~i~vwd~~~~~--~~~~~~~~~~~v-~~~~~s~~~~~-----la~~~~---d~~i~iwd~~~--~~~~~~~~~ 151 (708)
...+|+.|.+-+.. -...+.+....+ .....++++++ +++.+. ...+.+.+... ++.. ...
T Consensus 210 ~~~~~~~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~--~l~ 287 (711)
T 4hvt_A 210 TSSLYPNSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLKLQ--KIN 287 (711)
T ss_dssp CTTSSBCEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCEEE--ECC
T ss_pred CcCCCCCEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCcce--Eee
Confidence 23568888877643 223344333332 33555667663 343332 24566666653 4432 222
Q ss_pred ccccccEEEEEECCCCCEEEEec----------CC-eEEEEEcCCCc-------eEEEEEecccCCCCCceeEEEEEEcc
Q psy12614 152 DRQQGRILCTAWHSSGDYLVTGC----------AA-AVRVWDIHKGH-------AIHKMSLDKSSKFSKNTAVWCVAFCA 213 (708)
Q Consensus 152 ~~~~~~v~~~~~s~d~~~l~~~~----------~d-~i~iwd~~~~~-------~~~~~~~~~~~~~~~~~~v~~~~~~~ 213 (708)
...... +..+.++.+++... .. .|...++.++. ....+..+ .....+..+.+..
T Consensus 288 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~~~~~ 359 (711)
T 4hvt_A 288 MPSDAT---LQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTP-----TANEVFNFISTTK 359 (711)
T ss_dssp SCTTCE---EEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECC-----CTTEEEEEEEECS
T ss_pred cCCcce---EeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECC-----CCCCeEEEEEEEC
Confidence 222222 23344565555321 34 68888887642 23332222 2367788999998
Q ss_pred CCEEEEEcCCC--cEEEEeCCCCe-eEEE-eecc-ccCeEEEEEeCCCCEEE-EEec---CCeEEEEEc
Q psy12614 214 DFTIITGDSGG--FVRFWDGKTGV-QWSD-VKTH-KKDILALTVSEDENYLY-CAGV---DPTVVCFQR 273 (708)
Q Consensus 214 ~~~l~~~~~dg--~i~~wd~~~~~-~~~~-~~~~-~~~i~~~~~s~~~~~l~-~~~~---dg~i~iw~~ 273 (708)
+..+++...++ .|.++++.+++ .... +... .+.+.....++++..++ +.+. -+.+..+|+
T Consensus 360 ~~l~~~~~~~~~~~l~~~~~~~g~~~~~~~i~lp~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~ 428 (711)
T 4hvt_A 360 DRVFLATYDNVVAKVVTFTLENEQWTKPVVLKLPYQNAIFGMSSYEEEEEALITIENSIVPPTIYLWVK 428 (711)
T ss_dssp SCEEEEEEETTEEEEEEECEETTEECCCEEECCCSTTCEEEEECCTTCSCEEEEEECSSSCCEEEEECT
T ss_pred CEEEEEEEECCEEEEEEEECCCCceEEEeccCCCCCeEEEEEeecCcCCEEEEEEecCCCCCEEEEEeC
Confidence 86666666666 46778876664 2222 2211 24566666667665444 3332 245555554
|
| >1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A | Back alignment and structure |
|---|
Probab=92.17 E-value=11 Score=37.97 Aligned_cols=61 Identities=15% Similarity=0.206 Sum_probs=41.8
Q ss_pred ceeEEEEEEccCCEEEEEcCCC-cEEEEeCCCCeeE--EEeec------cccCeEEEEEeCC---CCEEEEEe
Q psy12614 203 NTAVWCVAFCADFTIITGDSGG-FVRFWDGKTGVQW--SDVKT------HKKDILALTVSED---ENYLYCAG 263 (708)
Q Consensus 203 ~~~v~~~~~~~~~~l~~~~~dg-~i~~wd~~~~~~~--~~~~~------~~~~i~~~~~s~~---~~~l~~~~ 263 (708)
-...+.++|.|+|+++++...+ .|++++..+++.. ..+.. .......|+|+|+ +.+|+.+.
T Consensus 26 l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~ 98 (454)
T 1cru_A 26 LNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISG 98 (454)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEE
T ss_pred CCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEE
Confidence 3456799999999977777775 6999986655432 22221 2456779999996 55666554
|
| >3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B | Back alignment and structure |
|---|
Probab=91.40 E-value=3.9 Score=37.98 Aligned_cols=223 Identities=11% Similarity=-0.010 Sum_probs=114.4
Q ss_pred CcEEEEEEeCCEEEEEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEec
Q psy12614 72 NSIECLTWFNDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLL 151 (708)
Q Consensus 72 ~~v~~l~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~ 151 (708)
..|..++......+... ||.|..|-......+..-......|..++...+- .++. . ||.|+.|-....... -..
T Consensus 24 ~~i~~ia~G~~h~~~l~-~G~v~~wG~n~~Gqlg~p~~~~~~i~~ia~G~~h-s~~l-~-~G~v~~wG~n~~Gql--g~P 97 (282)
T 3qhy_B 24 SGVDAIAGGYFHGLALK-GGKVLGWGANLNGQLTMPAATQSGVDAIAAGNYH-SLAL-K-DGEVIAWGGNEDGQT--TVP 97 (282)
T ss_dssp SSCCEEEECSSEEEEEE-TTEEEEEECCSSSTTSCCGGGGSCCCEEEECSSE-EEEE-E-TTEEEEEECCTTSTT--CCC
T ss_pred CCCcEEEeCCCeEEEEE-CCEEEEEeCCCCCCCCCCccCCCCEEEEEeCCCE-EEEE-E-CCEEEEeeCCCCCCC--CCC
Confidence 45777777644444445 9999999765432211111112356666665432 2333 4 899998876532211 111
Q ss_pred ccccccEEEEEECCCCCEEEEecCCeEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEEEEcCCCcEEEEeC
Q psy12614 152 DRQQGRILCTAWHSSGDYLVTGCAAAVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDG 231 (708)
Q Consensus 152 ~~~~~~v~~~~~s~d~~~l~~~~~d~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~wd~ 231 (708)
..-...|..++...+...++ ..+.|..|-....-.+.. .. .....|..++...+..++.. +|.|+.|-.
T Consensus 98 ~~~~~~v~~ia~G~~hs~al--~~G~v~~wG~n~~gqlg~-~~------~~~~~i~~i~~G~~~~~~l~--~G~v~~wG~ 166 (282)
T 3qhy_B 98 AEARSGVDAIAAGAWASYAL--KDGKVIAWGDDSDGQTTV-PA------EAQSGVTALDGGVYTALAVK--NGGVIAWGD 166 (282)
T ss_dssp GGGSSSEEEEEEETTEEEEE--ETTEEEEEECCTTSTTSC-CG------GGGSSEEEEEECSSEEEEEE--TTEEEEEEC
T ss_pred cccCCCeEEEECcCCEEEEE--eCCeEEEecCCCCCcCCC-Cc------cCCCCeEEEEcccCEEEEEE--CCEEEEecC
Confidence 11134677777654433333 323899997654222110 11 11345667766544444433 688998865
Q ss_pred CCCeeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe
Q psy12614 232 KTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH 311 (708)
Q Consensus 232 ~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~ 311 (708)
.....+..-......|..++.-.+. .++. .||.++.|-.....++ +. + ......|..++..
T Consensus 167 n~~gqlg~p~~~~~~v~~i~~G~~h-s~al--~~G~v~~wG~n~~gql----g~----p--------~~~~~~v~~i~~G 227 (282)
T 3qhy_B 167 NYFGQTTVPAEAQSGVDDVAGGIFH-SLAL--KDGKVIAWGDNRYKQT----TV----P--------TEALSGVSAIASG 227 (282)
T ss_dssp CTTSTTSCCGGGGSSEEEEEECSSE-EEEE--ETTEEEEEECCTTSTT----CC----C--------GGGGSSCCEEEEC
T ss_pred CCCCCCCCceecCCCeEEEEecCCE-EEEE--ECCeEEEEECCCCCCC----CC----C--------cccCCCceEEEcC
Confidence 4322211111123567777665443 3333 5899999976651111 00 0 0112356677666
Q ss_pred CCEEEEEcCCCeEEEEeCCC
Q psy12614 312 GNRLYSGGLDSYLSLSYYPP 331 (708)
Q Consensus 312 ~~~l~s~~~d~~i~iw~~~~ 331 (708)
....+.-. |+.+..|-...
T Consensus 228 ~~h~~al~-~g~v~~wG~n~ 246 (282)
T 3qhy_B 228 EWYSLALK-NGKVIAWGSSR 246 (282)
T ss_dssp SSCEEEEE-TTEEEEESTTC
T ss_pred CCEEEEEE-CCEEEEecCCC
Confidence 33333333 88888886654
|
| >3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha} | Back alignment and structure |
|---|
Probab=88.68 E-value=19 Score=35.24 Aligned_cols=218 Identities=10% Similarity=0.010 Sum_probs=104.7
Q ss_pred CEEEEEeCCCcEEEEeCCC-C-CeEEEEEecCCCCCcEEEEEEe---CCEEEEEcCCC----cEEEEECCCCeEeEEEee
Q psy12614 39 SRLAVSRADQSIEIWDISE-T-PHVDRVFIGDPLSNSIECLTWF---NDRLFSGGLQG----FVNEYDMRRLNIKSSTAV 109 (708)
Q Consensus 39 ~~la~~~~dg~v~iwd~~~-~-~~~~~~~~~h~~~~~v~~l~~~---~~~l~s~~~d~----~i~vwd~~~~~~~~~~~~ 109 (708)
..|.+|+..| +.+++... + .... .-.... ...|.+|++. .+.|.+++..| .|...+ ..++.-..+..
T Consensus 23 g~l~vgt~~G-l~~~~~~~~g~~W~~-~~~~~~-~~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s~-D~G~tW~~~~~ 98 (394)
T 3b7f_A 23 VMLLVATIKG-AWFLASDPARRTWEL-RGPVFL-GHTIHHIVQDPREPERMLMAARTGHLGPTVFRSD-DGGGNWTEATR 98 (394)
T ss_dssp CEEEEEETTE-EEEEEECTTSCSEEE-EEEEST-TSEEEEEEECSSSTTCEEEEEEC--CCEEEEEES-STTSCCEECSB
T ss_pred CEEEEEecCc-eEEEECCCCCCCceE-CCccCC-CCceEEEEECCCCCCeEEEEecCCCCCccEEEeC-CCCCCceECCc
Confidence 4677787777 55665443 2 2221 111122 3679999997 55666666555 444332 23322111110
Q ss_pred --------------cCCceEEEEEecC--CCEEEEEeCCCcEEEEEccCCcEEEEEecc----------------ccccc
Q psy12614 110 --------------TSGTCWCLSVHKK--KRLLAAGTEQGHINLFQISDEGLLYEKLLD----------------RQQGR 157 (708)
Q Consensus 110 --------------~~~~v~~~~~s~~--~~~la~~~~d~~i~iwd~~~~~~~~~~~~~----------------~~~~~ 157 (708)
....|.++++.|. ...|.+++..+.|...+-..........+. .....
T Consensus 99 ~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~ 178 (394)
T 3b7f_A 99 PPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTSPQGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPK 178 (394)
T ss_dssp CCCCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEETTEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCE
T ss_pred cccCCCcccccccccccceeEEEeCCCCCCCEEEEEecCCcEEEEcCCCCCeEECcCccCCccccccccccccCCCCCCc
Confidence 1135888999872 455666666665544432222222111110 11235
Q ss_pred EEEEEECCC-CCEEEEecCC-eEEEEEcCCCceEEEEEecccCCC-C-----CceeEEEEEEccC--CEEEEEcCCCcEE
Q psy12614 158 ILCTAWHSS-GDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKF-S-----KNTAVWCVAFCAD--FTIITGDSGGFVR 227 (708)
Q Consensus 158 v~~~~~s~d-~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~-~-----~~~~v~~~~~~~~--~~l~~~~~dg~i~ 227 (708)
+.+|.+.|. ...|..+..+ .|...+ ..|+....+.......+ . ....+.++++.|+ +.+.++...+ |.
T Consensus 179 i~~i~~d~~~~~~l~vg~~~ggl~~s~-DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~g-l~ 256 (394)
T 3b7f_A 179 MHSILVDPRDPKHLYIGMSSGGVFEST-DAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCG-IY 256 (394)
T ss_dssp EEEEEECTTCTTCEEEEEETBEEEEES-STTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTE-EE
T ss_pred eeEEEECCCCCCEEEEEECCCCEEEEC-CCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCe-EE
Confidence 789999884 3445545444 444332 23443333321100000 0 0134889999986 5666666544 55
Q ss_pred EEeCCCCeeEEEeec--cc---cCeEEEEEeCC-CCEEEEEe
Q psy12614 228 FWDGKTGVQWSDVKT--HK---KDILALTVSED-ENYLYCAG 263 (708)
Q Consensus 228 ~wd~~~~~~~~~~~~--~~---~~i~~~~~s~~-~~~l~~~~ 263 (708)
..+ ..++....+.. .. ..+.+++++|. ...|+++.
T Consensus 257 ~s~-D~G~tW~~~~~~l~~~~~~~~~~i~~~p~~~~~l~~~t 297 (394)
T 3b7f_A 257 RMD-RREGVWKRIGDAMPREVGDIGFPIVVHQRDPRTVWVFP 297 (394)
T ss_dssp EEE-TTTTEEECGGGGSCTTTCSCEEEEEECSSCTTCEEEEE
T ss_pred EeC-CCCCcceECCCCCCCCCccceEEEEECCCCCCEEEEEe
Confidence 444 23443333321 11 34567888763 34455543
|
| >3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A | Back alignment and structure |
|---|
Probab=87.11 E-value=28 Score=35.43 Aligned_cols=230 Identities=13% Similarity=0.123 Sum_probs=133.3
Q ss_pred EEEEeCCCcEEEEeCCCCCeEEEEEecCC-----------------------CCCcEE--EEEEe-----CCEEEEEc-C
Q psy12614 41 LAVSRADQSIEIWDISETPHVDRVFIGDP-----------------------LSNSIE--CLTWF-----NDRLFSGG-L 89 (708)
Q Consensus 41 la~~~~dg~v~iwd~~~~~~~~~~~~~h~-----------------------~~~~v~--~l~~~-----~~~l~s~~-~ 89 (708)
+.+|+.+|.|+|+-+.+++.+. .+.-.. ..+... .+++. |++|+.-. .
T Consensus 73 f~SgG~sG~v~v~G~PSmR~l~-~IpVF~~~~~~G~G~t~esk~il~~~~~~~~gD~HHp~~S~tdg~yDGrylfiNdka 151 (638)
T 3sbq_A 73 FWSGGHQGEVRVLGVPSMRELM-RIPVFNVDSATGWGLTNESRHIMGDSAKFLNGDCHHPHISMTDGKYDGKYLFINDKA 151 (638)
T ss_dssp EEECGGGCCEEEEEETTTEEEE-EECSSSCCTTTCTTTBHHHHHHHGGGGGCCCCCCCCCEEEEETTEEEEEEEEEEETT
T ss_pred EeecCcCceEEEEecCCcceEE-EeecccCCCCcccCCchhHHHHHhcCCCccCCCcCCCcccccCCeeeeEEEEEecCC
Confidence 5678889999999999988775 333110 012222 33333 67887776 5
Q ss_pred CCcEEEEECCCCeEeEEEe-ecCCceEEEEEe--cCCCEEEEEeC-------CCcE---------EE---EEccCCcEEE
Q psy12614 90 QGFVNEYDMRRLNIKSSTA-VTSGTCWCLSVH--KKKRLLAAGTE-------QGHI---------NL---FQISDEGLLY 147 (708)
Q Consensus 90 d~~i~vwd~~~~~~~~~~~-~~~~~v~~~~~s--~~~~~la~~~~-------d~~i---------~i---wd~~~~~~~~ 147 (708)
+..|..-++...++...+. .....+..++|- |+..|++.+++ ||.. .+ .|.++.++.+
T Consensus 152 n~RvAri~l~~~~~d~Ii~iPn~~~~Hg~~~~~~p~T~yv~~~~e~~~P~pndg~~~~~~~~~~y~~f~~iD~~tm~v~~ 231 (638)
T 3sbq_A 152 NSRVARIRLDIMKCDKMITVPNVQAIHGLRLQKVPHTKYVFANAEFIIPHPNDGKVFDLQDENSYTMYNAIDAETMEMAF 231 (638)
T ss_dssp TTEEEEEETTTTEEEEEEECTTCSCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCTTSTTEEEEEEEEETTTCSEEE
T ss_pred CcceEEEECCcEeeceeEeCCCCcCcccccccccCCccEEEecceeeccCCCCCcccccCChhhceEEEEEcCCccEEEE
Confidence 6779999999998877776 445678888886 78888888765 3321 11 2223333332
Q ss_pred EEecccccccEEEEEECCCCCEEEEecCC----------------eEEEEEcC-------CCce-------EEEEEeccc
Q psy12614 148 EKLLDRQQGRILCTAWHSSGDYLVTGCAA----------------AVRVWDIH-------KGHA-------IHKMSLDKS 197 (708)
Q Consensus 148 ~~~~~~~~~~v~~~~~s~d~~~l~~~~~d----------------~i~iwd~~-------~~~~-------~~~~~~~~~ 197 (708)
+.... +....+...++|.+.++.+.+ .+.++|+. .|+. +..+.....
T Consensus 232 Qv~v~---gnld~~~~~~~g~~af~t~yNsE~~~~l~em~~~e~D~~~vfn~~~ie~~vk~G~~~~~~g~gv~ViD~~~~ 308 (638)
T 3sbq_A 232 QVIVD---GNLDNTDADYTGRFAAATCYNSEKAFDLGGMMRNERDWVVVFDIHAVEAAVKAGDFITLGDSKTPVLDGRKK 308 (638)
T ss_dssp EEEES---SCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSCEEEEEEEHHHHHHHHHTTCCBCCTTCCCCEEECSCB
T ss_pred EEEcC---CChhhcCCCCCCCEEEEeeeccccCcChhhcCcccccEEEEecHHHHHHHHhcCCeEEECCCCeeEEccccc
Confidence 22222 122234446667776665543 25666653 1110 111111000
Q ss_pred ---CC-C----CCceeEEEEEEccCCE--EEEEcCCCcEEEEeCCCC------ee-------EEEeeccccCeEEEEEeC
Q psy12614 198 ---SK-F----SKNTAVWCVAFCADFT--IITGDSGGFVRFWDGKTG------VQ-------WSDVKTHKKDILALTVSE 254 (708)
Q Consensus 198 ---~~-~----~~~~~v~~~~~~~~~~--l~~~~~dg~i~~wd~~~~------~~-------~~~~~~~~~~i~~~~~s~ 254 (708)
.. + ........+..+|||+ +++|-.+.++.++|.+.- +. ..... -.-.....+|.+
T Consensus 309 ~~~~~~~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-~GlGPlHt~Fd~ 387 (638)
T 3sbq_A 309 DGKDSKFTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-LGLGPLHTTFDG 387 (638)
T ss_dssp TTBCCSSEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-CCSCEEEEEECS
T ss_pred cccCCceEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc-CCCcccEEEECC
Confidence 00 0 0012233678899996 455666889999998731 11 22222 344567889999
Q ss_pred CCCEEEEEecCCeEEEEEccC
Q psy12614 255 DENYLYCAGVDPTVVCFQRTR 275 (708)
Q Consensus 255 ~~~~l~~~~~dg~i~iw~~~~ 275 (708)
+|+-..+---|..|.-|++..
T Consensus 388 ~G~aYTtlfidSqvvkWni~~ 408 (638)
T 3sbq_A 388 RGNAYTTLFIDSQVVKWNMEE 408 (638)
T ss_dssp SSEEEEEETTTTEEEEEEHHH
T ss_pred CCceEeeeeecceEEEEeccH
Confidence 994444555799999999976
|
| >3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=81.52 E-value=36 Score=32.14 Aligned_cols=164 Identities=13% Similarity=0.149 Sum_probs=96.0
Q ss_pred eEEEEEecCCCeEEEEecCCcEEEecCC---------CeEEEEEecCCCCCccCcceEEE-EECC--CCcEEEEEecCCe
Q psy12614 455 FTHVLISADSTLLLAVSLNGPLYIIDLS---------SLEIKYCVDPYKSNLMSDVISLV-QMSE--CKQYIVCADRKSH 522 (708)
Q Consensus 455 i~~~~~s~d~~~l~~~~~dg~i~~~~~~---------~~~~~~~~~~~~~~~~~~~i~~~-~~s~--~~~~l~~~~~d~~ 522 (708)
+..+........|+..+..|.+|.+... .+..+..+-.... ...|..+ .+.. +..++++++.+|.
T Consensus 44 ~~~~~~~~t~d~ll~fT~~Gr~y~~~~~~lp~~~r~~~G~~i~~~l~l~~---~e~i~~~~~~~~~~~e~~~v~~T~~G~ 120 (327)
T 3uc1_A 44 VAHFFVCSTHDLILFFTTQGRVYRAKAYDLPEASRTARGQHVANLLAFQP---EERIAQVIQIRGYTDAPYLVLATRNGL 120 (327)
T ss_dssp EEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCSSSCCEEHHHHTTCCT---TCCEEEEEEESSTTSSSEEEEEETTSE
T ss_pred EEEEEEeCCCCEEEEEeCCCeEEEEEHHHCcCCCccCCCEEHHHccCCCC---CCEEEEEEEeccCCCCCEEEEEcCCCE
Confidence 3334445566667777788885555321 1222222222222 3345544 4443 5789999999999
Q ss_pred EEEEECCce-------ee--ecCCCCCCceEEEEcCCCCEEEEEecCCcEEEEEcCCCCCCchhhhhhccCchhhhcCCC
Q psy12614 523 VVIWKNGQH-------HA--SLPRYRKPSTAMAIHPTLSTLVTVYSDHRIVEFDLNRKAFTTFSRKLETNHPNEWLSRQL 593 (708)
Q Consensus 523 i~iw~~~~~-------~~--~~~~~~~~v~~l~~s~d~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 593 (708)
|+--.+... .. .+.. ...+..+........|+..+..|.+..+.....+.....+.........+ ...+
T Consensus 121 iKr~~l~~~~~~~r~G~~~i~lke-~D~lv~~~~~~~~d~ill~T~~G~~~rf~~~~~eip~~gr~a~Gv~~i~L-~~~d 198 (327)
T 3uc1_A 121 VKKSKLTDFDSNRSGGIVAVNLRD-NDELVGAVLCSAGDDLLLVSANGQSIRFSATDEALRPMGRATSGVQGMRF-NIDD 198 (327)
T ss_dssp EEEEEGGGGCCCCSSCEESCBCCT-TCCEEEEEEECTTCEEEEEETTSEEEEEECCTTTSCCCCTTSBCEESSCC-CTTC
T ss_pred EEEeEHHHhhccccCceEEEEECC-CCEEEEEEEecCCCEEEEEECCCeEEEEECcccccCcCCcCCCCeeeecC-CCCC
Confidence 999988721 21 3333 34555555555667788899999999888872122111111000000112 2355
Q ss_pred CeeEEEeCCCCCceEEEEcCeeEEEEecCC
Q psy12614 594 PVLGIEFDPQDSSLIYLMDDSALCVINKNK 623 (708)
Q Consensus 594 ~i~~l~~s~~~~~l~~~~~d~~i~~wd~~~ 623 (708)
.|.++...+++.+|++++..|.++.-.++.
T Consensus 199 ~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e 228 (327)
T 3uc1_A 199 RLLSLNVVREGTYLLVATSGGYAKRTAIEE 228 (327)
T ss_dssp CEEEEEECCTTCEEEEEETTSEEEEEEGGG
T ss_pred EEEEEEEECCCCEEEEEeCCCcEEEEEHHH
Confidence 788877777777899999999998887753
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 708 | ||||
| d1vyhc1 | 317 | b.69.4.1 (C:92-408) Platelet-activating factor ace | 1e-13 | |
| d1vyhc1 | 317 | b.69.4.1 (C:92-408) Platelet-activating factor ace | 8e-06 | |
| d1vyhc1 | 317 | b.69.4.1 (C:92-408) Platelet-activating factor ace | 6e-05 | |
| d1vyhc1 | 317 | b.69.4.1 (C:92-408) Platelet-activating factor ace | 0.002 | |
| d1tbga_ | 340 | b.69.4.1 (A:) beta1-subunit of the signal-transduc | 2e-12 | |
| d1tbga_ | 340 | b.69.4.1 (A:) beta1-subunit of the signal-transduc | 4e-11 | |
| d1tbga_ | 340 | b.69.4.1 (A:) beta1-subunit of the signal-transduc | 7e-08 | |
| d1tbga_ | 340 | b.69.4.1 (A:) beta1-subunit of the signal-transduc | 1e-05 | |
| d1tbga_ | 340 | b.69.4.1 (A:) beta1-subunit of the signal-transduc | 8e-05 | |
| d1tbga_ | 340 | b.69.4.1 (A:) beta1-subunit of the signal-transduc | 5e-04 | |
| d1pbyb_ | 337 | b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase | 1e-08 | |
| d1jmxb_ | 346 | b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase | 5e-08 | |
| d1jmxb_ | 346 | b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase | 4e-05 | |
| d1erja_ | 388 | b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea | 9e-08 | |
| d1erja_ | 388 | b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea | 2e-07 | |
| d1erja_ | 388 | b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea | 2e-05 | |
| d1k8kc_ | 371 | b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 | 2e-07 | |
| d1k8kc_ | 371 | b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 | 2e-06 | |
| d2ovrb2 | 342 | b.69.4.1 (B:2365-2706) F-box/WD repeat-containing | 2e-07 | |
| d2ovrb2 | 342 | b.69.4.1 (B:2365-2706) F-box/WD repeat-containing | 6e-05 | |
| d2ovrb2 | 342 | b.69.4.1 (B:2365-2706) F-box/WD repeat-containing | 8e-04 | |
| d1p22a2 | 293 | b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be | 1e-06 | |
| d1p22a2 | 293 | b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be | 3e-06 | |
| d1pgua1 | 325 | b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba | 2e-06 | |
| d1yfqa_ | 342 | b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake | 8e-06 | |
| d1gxra_ | 337 | b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum | 1e-05 | |
| d1gxra_ | 337 | b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum | 6e-05 | |
| d1gxra_ | 337 | b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum | 7e-05 | |
| d1gxra_ | 337 | b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum | 8e-04 | |
| d1nexb2 | 355 | b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker' | 7e-05 | |
| d1nexb2 | 355 | b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker' | 8e-04 | |
| d1nexb2 | 355 | b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker' | 0.002 | |
| d1nr0a1 | 311 | b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne | 1e-04 | |
| d1nr0a1 | 311 | b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne | 3e-04 | |
| d1nr0a1 | 311 | b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne | 0.002 | |
| d1nr0a2 | 299 | b.69.4.1 (A:313-611) Actin interacting protein 1 { | 2e-04 | |
| d2bbkh_ | 355 | b.69.2.1 (H:) Methylamine dehydrogenase, H-chain { | 4e-04 | |
| d1mdah_ | 368 | b.69.2.1 (H:) Methylamine dehydrogenase, H-chain { | 0.002 |
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Score = 70.5 bits (171), Expect = 1e-13
Identities = 38/315 (12%), Positives = 92/315 (29%), Gaps = 36/315 (11%)
Query: 29 INCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWFNDRLFSGG 88
+ + P S + + D +I++WD ET +R G S L S
Sbjct: 20 VTRVIFHPVFSVMVSASEDATIKVWDY-ETGDFERTLKGHTDSVQDISFDHSGKLLASCS 78
Query: 89 LQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYE 148
+ +D + + +S+ + + + I ++++ +
Sbjct: 79 ADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKT 138
Query: 149 KLLDRQQGRILCTAWHSSGDYLVTGCA-AAVRVWDIHKGHAIHKMSLDKSSKFS------ 201
+ + + G + + VRVW + ++ +
Sbjct: 139 --FTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPE 196
Query: 202 --------KNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVS 253
+ + +++G ++ WD TG+ + H + +
Sbjct: 197 SSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFH 256
Query: 254 EDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH-- 311
++ D T+ + K + + + HE V SL H
Sbjct: 257 SGGKFILSCADDKTLRVWDYKNKRCMKTLNA----------------HEHFVTSLDFHKT 300
Query: 312 GNRLYSGGLDSYLSL 326
+ +G +D + +
Sbjct: 301 APYVVTGSVDQTVKV 315
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Score = 46.3 bits (108), Expect = 8e-06
Identities = 35/330 (10%), Positives = 88/330 (26%), Gaps = 33/330 (10%)
Query: 243 HKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHE 302
H+ + + + + A D T+ + + G + +
Sbjct: 16 HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLA 75
Query: 303 GDVKSLALHGNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTS 362
+ + + + ++ P VS ++D + + +
Sbjct: 76 SCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPN---GDHIVSASRDKTIKMWEVQT 132
Query: 363 HLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYST 422
+ + + N G + S SND +
Sbjct: 133 GYCVKTFTGHREWVRMVRPNQDGTLIAS--------------------CSNDQTVRVWVV 172
Query: 423 ESCVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTH---VLISADSTLLLAVSLNGPLYII 479
+ L + + S T LL+ S + + +
Sbjct: 173 ATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMW 232
Query: 480 DLSSLEIKYCVDPYKSNLMSDVISLVQMSECKQYIVCADRKSHVVIW--KNGQHHASLPR 537
D+S+ + + + + V ++I+ + +W KN + +L
Sbjct: 233 DVSTGMCLMTLVGHDNW-----VRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNA 287
Query: 538 YRKPSTAMAIHPTLSTLVTVYSDHRIVEFD 567
+ T++ H T +VT D + ++
Sbjct: 288 HEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 317
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Score = 43.2 bits (100), Expect = 6e-05
Identities = 35/330 (10%), Positives = 106/330 (32%), Gaps = 33/330 (10%)
Query: 155 QGRILCTAWHSSGDYLVTGCA-AAVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCA 213
+ + +H +V+ A ++VWD G + S + +
Sbjct: 17 RSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLAS 76
Query: 214 DFTIITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQR 273
+ ++ WD + + H ++ ++++ + +++ A D T+ ++
Sbjct: 77 CSADM------TIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEV 130
Query: 274 TRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALHGNRLYSGGLDSYLSLSYYPPKT 333
V + +G + + + + G + S D + + K
Sbjct: 131 QTGYCVKTFTGHREWVRMVRPNQD--------------GTLIASCSNDQTVRVWVVATKE 176
Query: 334 LV-KYPCTLAQSTPVSLAKDIQHVLL-QYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSF 391
+ +S A + + + + T S S T + +S
Sbjct: 177 CKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVST 236
Query: 392 PRLIVKMSAVNNATIRCSVVSNDGKYVAY-STESCVRLHSLDLDGDKPQISRIKNLPAPL 450
++ + +N +R + + GK++ + + +R+ +K + + +
Sbjct: 237 GMCLMTLVGHDNW-VRGVLFHSGGKFILSCADDKTLRVWDYK---NKRCMKTLNAHEHFV 292
Query: 451 FKSIFTHVLISADSTLLLAVSLNGPLYIID 480
T + + ++ S++ + + +
Sbjct: 293 -----TSLDFHKTAPYVVTGSVDQTVKVWE 317
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Score = 38.6 bits (88), Expect = 0.002
Identities = 26/232 (11%), Positives = 59/232 (25%), Gaps = 13/232 (5%)
Query: 111 SGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYL 170
+ H ++ + +E I ++ + L + ++ SG L
Sbjct: 17 RSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFE--RTLKGHTDSVQDISFDHSGKLL 74
Query: 171 VTGCAAAVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWD 230
+ A +G + + I++ ++ W+
Sbjct: 75 ASCSADMTIKLWDFQGFECIRT-----MHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWE 129
Query: 231 GKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSS 290
+TG H++ + + ++D + D TV + K
Sbjct: 130 VQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVE 189
Query: 291 V------WVRSVNRVIHEGDVKSLALHGNRLYSGGLDSYLSLSYYPPKTLVK 336
S + K G L SG D + + +
Sbjct: 190 CISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLM 241
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Score = 66.7 bits (161), Expect = 2e-12
Identities = 27/157 (17%), Positives = 47/157 (29%), Gaps = 9/157 (5%)
Query: 76 CLTWFNDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHI 135
L SG +D+R + + + A G++
Sbjct: 191 SLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATC 250
Query: 136 NLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCA-AAVRVWDIHKGHAIHKMSL 194
LF + + L D I ++ SG L+ G VWD K ++
Sbjct: 251 RLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAG 310
Query: 195 DKSSKFSKNTAVWCVAFCAD-FTIITGDSGGFVRFWD 230
+ V C+ D + TG F++ W+
Sbjct: 311 HDNR-------VSCLGVTDDGMAVATGSWDSFLKIWN 340
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Score = 62.8 bits (151), Expect = 4e-11
Identities = 22/156 (14%), Positives = 44/156 (28%), Gaps = 7/156 (4%)
Query: 114 CWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTG 173
LS+ RL +G L+ + + + I + +G+ TG
Sbjct: 187 VMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQT--FTGHESDINAICFFPNGNAFATG 244
Query: 174 CAAAVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCAD-FTIITGDSGGFVRFWDGK 232
A + S + + V+F ++ G WD
Sbjct: 245 SDDATCRLFDLRADQELMTY----SHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDAL 300
Query: 233 TGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTV 268
+ + H + L V++D + D +
Sbjct: 301 KADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFL 336
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Score = 52.8 bits (125), Expect = 7e-08
Identities = 35/288 (12%), Positives = 69/288 (23%), Gaps = 36/288 (12%)
Query: 71 SNSIECLTWFND--RLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAA 128
I + W D L S G + +D N + + S + +A
Sbjct: 55 LAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVAC 114
Query: 129 GTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAAAVRVWDIHKGHA 188
G +++ + + + D +
Sbjct: 115 GGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTS----SGDTTCALWD 170
Query: 189 IHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVKTHKKDIL 248
I + + ++G + WD + G+ H+ DI
Sbjct: 171 IETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDIN 230
Query: 249 ALTVSEDENYLYCAGVDPTVV------------CFQRTRKPQVCSTSGPEQGSSVWVRSV 296
A+ + N D T + S S + G +
Sbjct: 231 AICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYD 290
Query: 297 NRVI----------------HEGDVKSLALH--GNRLYSGGLDSYLSL 326
+ H+ V L + G + +G DS+L +
Sbjct: 291 DFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKI 338
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Score = 45.5 bits (106), Expect = 1e-05
Identities = 41/324 (12%), Positives = 89/324 (27%), Gaps = 43/324 (13%)
Query: 205 AVWCVAFCADF-TIITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAG 263
++ + + D +++ G + WD T + + ++ + NY+ C G
Sbjct: 57 KIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGG 116
Query: 264 VDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALHGNRLYSGGLDSY 323
+D + + S G + ++ + V S L+
Sbjct: 117 LDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQ 176
Query: 324 LSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNT 383
+ ++ VS A D +LW +
Sbjct: 177 TTTFTGHTGDVMSLSLAPDTRLFVSGACDA---------SAKLWDV-------------R 214
Query: 384 TGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAY-STESCVRLHSLDLDGDKPQISR 442
G+ +F + + I +G A S ++ RL D
Sbjct: 215 EGMCRQTFT--------GHESDINAICFFPNGNAFATGSDDATCRLF------DLRADQE 260
Query: 443 IKNLPAPLFKSIFTHVLISADSTLLLAVSLNGPLYIIDLSSLEIKYCVDPYKSNLMSDVI 502
+ T V S LLLA + + D + + + + +
Sbjct: 261 LMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSC--- 317
Query: 503 SLVQMSECKQYIVCADRKSHVVIW 526
+ +++ + S + IW
Sbjct: 318 --LGVTDDGMAVATGSWDSFLKIW 339
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Score = 42.8 bits (99), Expect = 8e-05
Identities = 18/112 (16%), Positives = 37/112 (33%), Gaps = 3/112 (2%)
Query: 29 INCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWFND--RLFS 86
IN I P + A D + ++D+ + + I +++ L +
Sbjct: 229 INAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNI-ICGITSVSFSKSGRLLLA 287
Query: 87 GGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLF 138
G N +D + + A CL V +A G+ + ++
Sbjct: 288 GYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 339
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Score = 40.5 bits (93), Expect = 5e-04
Identities = 11/110 (10%), Positives = 31/110 (28%), Gaps = 5/110 (4%)
Query: 456 THVLISADSTLLLAVSLNGPLYIIDLSSLEIKYCVDPYKSNLMSDVISLVQMSECKQYIV 515
+ + S + + DL + Y + + I+ V S+ + ++
Sbjct: 230 NAICFFPNGNAFATGSDDATCRLFDL---RADQELMTYSHDNIICGITSVSFSKSGRLLL 286
Query: 516 CADRKSHVVIW--KNGQHHASLPRYRKPSTAMAIHPTLSTLVTVYSDHRI 563
+ +W L + + + + + T D +
Sbjct: 287 AGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFL 336
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Score = 55.2 bits (131), Expect = 1e-08
Identities = 42/327 (12%), Positives = 84/327 (25%), Gaps = 23/327 (7%)
Query: 168 DYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCAD--FTIITGDSGG 224
DY++ + V D K +++ + T +
Sbjct: 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGP-----TPMVPMVAPGGRIAYATVNKSE 56
Query: 225 FVRFWDGKTG-----VQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQV 279
+ D TG + S + K + +S D L + +P
Sbjct: 57 SLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTR 116
Query: 280 CSTSGPEQGSSVWVRSVNRVIHEGDVKSLALHGNRLYSGGLDSYLSLSYYPPKTLVKYPC 339
+ E S + LA + GL L + TLV+
Sbjct: 117 VALYDAETLSRRKAFE-----APRQITMLAWARDGSKLYGLGRDLHVMDPEAGTLVEDKP 171
Query: 340 TLAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMS 399
+ D+ V Q+ S + + D+ P L+
Sbjct: 172 IQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDI-----DPADPTAYRTGLLTMDL 226
Query: 400 AVNNATIRCSVVSNDGKYVAYSTESCVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVL 459
+R + + + + R + + + ++ + V
Sbjct: 227 ETGEMAMREVRIMDVFYFSTAVNPAKTRAFGAYNVLESFDLEKNASIKRVPLPHSYYSVN 286
Query: 460 ISADSTLLLAVSLNGPLYIIDLSSLEI 486
+S D + + G L D +LE
Sbjct: 287 VSTDGSTVWLGGALGDLAAYDAETLEK 313
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Length = 346 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Score = 53.2 bits (126), Expect = 5e-08
Identities = 36/341 (10%), Positives = 76/341 (22%), Gaps = 34/341 (9%)
Query: 162 AWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCAD--FTII 218
A + +Y++ + V D+ + D +
Sbjct: 3 ALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKF------GPGTAMMAPDNRTAYV 56
Query: 219 TGDSGGFVRFWDGKTG------VQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQ 272
+ G + D T S + + + +S D +Y +
Sbjct: 57 LNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDH 116
Query: 273 RTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALHGNRLYSGGLDSYLSLSYYPPK 332
KP G + + + A G+ +G +
Sbjct: 117 YVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAG---PDIYKMDVKTG 173
Query: 333 TLVKYPCTLAQSTPVSLAKDIQHVLLQYT-----SHLELWSLGSAQSTDLSSHSNTTGVP 387
+ A D+ + + S L + D ++ G
Sbjct: 174 KYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYL 233
Query: 388 LLSF--PRLIVKMSAVNNATIRCSVVSNDGKYVAYSTESCVRLHSLDLDGDKPQISRIKN 445
+ + + A + S Y + + + D Q IK
Sbjct: 234 SVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGVLNRLAKY------DLKQRKLIKA 287
Query: 446 LPAPLFKSIFTHVLISADSTLLLAVSLNGPLYIIDLSSLEI 486
+ V L L + + +LE
Sbjct: 288 ANLD---HTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEK 325
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Length = 346 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Score = 44.0 bits (102), Expect = 4e-05
Identities = 17/139 (12%), Positives = 38/139 (27%), Gaps = 10/139 (7%)
Query: 115 WCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGC 174
K+ A + G + + + G
Sbjct: 212 TIARFKDDKQDPATADLLYGYLSVDLKT-GKTHTQEFADLTELYFTGLRSPKDPNQIYGV 270
Query: 175 AAAVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCAD-FTIITGDSGGFVRFWDGKT 233
+ +D+ + I +LD + +CVAF + G + + ++ T
Sbjct: 271 LNRLAKYDLKQRKLIKAANLDHT--------YYCVAFDKKGDKLYLGGTFNDLAVFNPDT 322
Query: 234 GVQWSDVKTHKKDILALTV 252
+ ++K D+ T
Sbjct: 323 LEKVKNIKLPGGDMSTTTP 341
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 52.5 bits (124), Expect = 9e-08
Identities = 19/138 (13%), Positives = 43/138 (31%), Gaps = 25/138 (18%)
Query: 111 SGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLL----------YEKLLDRQQGRILC 160
+ + + + + + +G+ + L+ + + E + +L
Sbjct: 254 KDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLS 313
Query: 161 TAWHSSGDYLVTGCA-AAVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADF---- 215
A + +Y+++G V WD G+ + + ++S V VA
Sbjct: 314 VATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNS-------VISVAVANGSSLGP 366
Query: 216 ---TIITGDSGGFVRFWD 230
TG R W
Sbjct: 367 EYNVFATGSGDCKARIWK 384
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 51.7 bits (122), Expect = 2e-07
Identities = 49/378 (12%), Positives = 110/378 (29%), Gaps = 43/378 (11%)
Query: 216 TIITGDSGGFVRFWDGKTGVQWS----DVKTHKKDILALTVSEDENYLYCAGVDPTVVCF 271
+ + + ++ + H + + S D YL T V
Sbjct: 30 DALKKQTNDYYILYNPALPREIDVELHKSLDHTSVVCCVKFSNDGEYLATGCNKTTQVYR 89
Query: 272 QRTRKP-QVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSGGLDSYLSLSY 328
S + + + + ++S+ G L +G D + +
Sbjct: 90 VSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWD 149
Query: 329 YPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPL 388
+ +V + + + +S + T
Sbjct: 150 IENRKIVMILQ-------------------GHEQDIYSLDYFPSGDKLVSGSGDRTVRIW 190
Query: 389 LSFPRLIVKMSAVNNATIRCSVVSNDGKYVAY-STESCVRLHSLDLDGDKPQISRIKNLP 447
++ + +V DGKY+A S + VR+ + G + +N
Sbjct: 191 DLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSE-TGFLVERLDSENES 249
Query: 448 APLFKSIFTHVLISADSTLLLAVSLNGPLYIIDLSSLEIKYCVDPYKS-------NLMSD 500
K V+ + D +++ SL+ + + +L + K S D
Sbjct: 250 GTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKD 309
Query: 501 VISLVQMSECKQYIVCADRKSHVVIW--KNGQHHASLPRYRKPSTAMAI------HPTLS 552
+ V ++ +YI+ + V+ W K+G L +R ++A+ P +
Sbjct: 310 FVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYN 369
Query: 553 TLVTVYSDHRIVEFDLNR 570
T D + + +
Sbjct: 370 VFATGSGDCKARIWKYKK 387
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 45.2 bits (105), Expect = 2e-05
Identities = 47/378 (12%), Positives = 105/378 (27%), Gaps = 62/378 (16%)
Query: 156 GRILCTAWHSSGDYLVTGCAAAVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADF 215
+ C + + G+YL TGC +V+ + G + ++S D ++
Sbjct: 63 SVVCCVKFSNDGEYLATGCNKTTQVYRVSDGSLVARLSDDSAANKDPEN----------- 111
Query: 216 TIITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTR 275
+ S + I ++ S D +L D + +
Sbjct: 112 -------------------LNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIEN 152
Query: 276 KPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALHGNRLYSGGLDSYLSLSYYPPKTLV 335
+ V G EQ + + L +G +
Sbjct: 153 RKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLT----LSIEDGVT 208
Query: 336 KYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLI 395
+ ++ + V + + L +++ + H +
Sbjct: 209 TVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKD------------- 255
Query: 396 VKMSAVNNATIRCSVVSNDGKYVA-YSTESCVRLHSLD----LDGDKPQISRIKNLPAPL 450
++ V + DG+ V S + V+L +L K S +
Sbjct: 256 ---------SVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIG 306
Query: 451 FKSIFTHVLISADSTLLLAVSLNGPLYIIDLSSLEIKYCVDPYKSNLMS-DVISLVQMSE 509
K V + + +L+ S + + D S + ++++++S V + +
Sbjct: 307 HKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGP 366
Query: 510 CKQYIVCADRKSHVVIWK 527
IWK
Sbjct: 367 EYNVFATGSGDCKARIWK 384
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Score = 51.8 bits (122), Expect = 2e-07
Identities = 35/311 (11%), Positives = 87/311 (27%), Gaps = 11/311 (3%)
Query: 115 WCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGC 174
C + +K + +A +++++ S + L G++ W + +VT
Sbjct: 11 SCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCG 70
Query: 175 A-AAVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKT 233
VW + + + + ++ ++ + +
Sbjct: 71 TDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDW 130
Query: 234 GVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWV 293
V K + +L+L + L D F K + GS +
Sbjct: 131 WVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPF 190
Query: 294 RSVNRVIHE--GDVKSLALHGNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAK 351
+ G V + N + ++ + +++ P
Sbjct: 191 GELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLP----- 245
Query: 352 DIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVV 411
+ + + + L + G L ++ + G + K S+ T R
Sbjct: 246 ---LLAVTFITESSLVAAGHDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQ 302
Query: 412 SNDGKYVAYST 422
+ D K + +
Sbjct: 303 NLDKKASSEGS 313
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Score = 48.3 bits (113), Expect = 2e-06
Identities = 37/275 (13%), Positives = 86/275 (31%), Gaps = 21/275 (7%)
Query: 29 INCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWFND--RLFS 86
I+C A +++A+ + + I++ +V + + + W D R+ +
Sbjct: 10 ISCHAWNKDRTQIAICPNNHEVHIYEK-SGNKWVQVHELKEHNGQVTGVDWAPDSNRIVT 68
Query: 87 GGLQGFVNEYDMRRLNIKSSTAVT--SGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEG 144
G + ++ K + + + C+ ++ A G+ I++ E
Sbjct: 69 CGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQEN 128
Query: 145 LLYEKLLDRQQGRILCTA---WHSSGDYLVTGCAAAVRVWDIHKGHAIHKMSLDKSSKFS 201
+ ++ R + +S C R++ + + +
Sbjct: 129 DWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKM 188
Query: 202 KNT-----------AVWCVAFCADFTIITGDSG-GFVRFWDGKTGVQWSDVKTHKKDILA 249
V V F A+ + + S V D + + + + +LA
Sbjct: 189 PFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLA 248
Query: 250 LTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSG 284
+T + + + AG D V F S G
Sbjct: 249 VTFITESSLV-AAGHDCFPVLFTYDSAAGKLSFGG 282
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 51.0 bits (120), Expect = 2e-07
Identities = 26/206 (12%), Positives = 60/206 (29%), Gaps = 12/206 (5%)
Query: 30 NCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWFNDRLFSGGL 89
+ R+ D +++WD + G +N + L + + SG L
Sbjct: 139 AVRCVQYDGRRVVSGAYDFMVKVWDPETETCL-HTLQGH--TNRVYSLQFDGIHVVSGSL 195
Query: 90 QGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEK 149
+ +D+ N + + + +L +G + ++ I L
Sbjct: 196 DTSIRVWDVETGNCIHTLTGHQSLTSGMELKD--NILVSGNADSTVKIWDIKTGQCLQTL 253
Query: 150 LLDRQQGRILCTAWHSSGDYLVTGCAAAVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCV 209
+ + + + + V++WD+ G I + +S VW +
Sbjct: 254 QGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGG--VVWRI 311
Query: 210 AFCADFTIIT-----GDSGGFVRFWD 230
+ G + D
Sbjct: 312 RASNTKLVCAVGSRNGTEETKLLVLD 337
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 43.3 bits (100), Expect = 6e-05
Identities = 31/329 (9%), Positives = 86/329 (26%), Gaps = 12/329 (3%)
Query: 202 KNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYC 261
+ + C+ FC + I++G ++ W TG + H + + + ++
Sbjct: 16 DDHVITCLQFCGNR-IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISGS 74
Query: 262 AGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALHGNRLYSGGLD 321
V + + L
Sbjct: 75 TDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLM 134
Query: 322 SYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHS 381
+++ + + + L H + S S
Sbjct: 135 GHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGS 194
Query: 382 NTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYSTESCVRLHSLDLDGDKPQIS 441
T + + + + ++ + D V+ + +S V++ + +
Sbjct: 195 LDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQ 254
Query: 442 RIKNLPAPLFKSIFTHVLISADSTLLLAVSLNGPLYIIDLSSLEIKYCVDPYKSNLMSDV 501
K + + ++ S +G + + DL + E + +S V
Sbjct: 255 GP-------NKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGV 307
Query: 502 ISLVQMSECKQYIVCADR----KSHVVIW 526
+ ++ S K R ++ +++
Sbjct: 308 VWRIRASNTKLVCAVGSRNGTEETKLLVL 336
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 39.8 bits (91), Expect = 8e-04
Identities = 47/304 (15%), Positives = 94/304 (30%), Gaps = 44/304 (14%)
Query: 27 KVINCIACEPKSSRLAVSRADQSIEIWDISE-------TPHVDRVFIGDPLSNSIECLTW 79
VI C+ +R+ D ++++W H V+ N I +
Sbjct: 18 HVITCLQ--FCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISGST 75
Query: 80 FNDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQ 139
G + + S R+ T Q L
Sbjct: 76 DRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMG 135
Query: 140 ISDEGLLYE---------------KLLDRQQGRILCT---------AWHSSGDYLVTGCA 175
+ K+ D + L T + G ++V+G
Sbjct: 136 HVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSL 195
Query: 176 -AAVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTG 234
++RVWD+ G+ IH ++ +S + + +++G++ V+ WD KTG
Sbjct: 196 DTSIRVWDVETGNCIHTLTGHQS-------LTSGMELKDNI-LVSGNADSTVKIWDIKTG 247
Query: 235 VQWSDVKTHKK-DILALTVSEDENYLYCAGVDPTVVCFQ-RTRKPQVCSTSGPEQGSSVW 292
++ K + ++N++ + D TV + +T + + GS
Sbjct: 248 QCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGV 307
Query: 293 VRSV 296
V +
Sbjct: 308 VWRI 311
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Score = 48.7 bits (114), Expect = 1e-06
Identities = 38/300 (12%), Positives = 93/300 (31%), Gaps = 24/300 (8%)
Query: 27 KVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWFNDRLFS 86
K + C+ ++ D +I+IWD T R+ G + S+ CL + D
Sbjct: 16 KGVYCLQ--YDDQKIVSGLRDNTIKIWDK-NTLECKRILTGH--TGSVLCLQY--DERVI 68
Query: 87 GGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLL 146
+ + L + ++ ++ I ++ ++ +
Sbjct: 69 ITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDI 128
Query: 147 YEKLLDRQQGRILCTAWHSSGDYLVTGCAAAVRVWDIHKGHAIHKMSLDKSSKFSKNTAV 206
+ + + + ++VW+ + ++ +
Sbjct: 129 TLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLN-------GHKRGI 181
Query: 207 WCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDP 266
C+ + D +++G S +R WD + G ++ H + L + D + D
Sbjct: 182 ACLQYR-DRLVVSGSSDNTIRLWDIECGACLRVLEGH--EELVRCIRFDNKRIVSGAYDG 238
Query: 267 TVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALHGNRLYSGGLDSYLSL 326
+ + + +G ++ V H G V L ++ S D + +
Sbjct: 239 KIKVWDLVAALDPRAPAGTLCLRTL-------VEHSGRVFRLQFDEFQIVSSSHDDTILI 291
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Score = 47.5 bits (111), Expect = 3e-06
Identities = 27/233 (11%), Positives = 66/233 (28%), Gaps = 10/233 (4%)
Query: 1 MSHMCKKRNTMGTYGVHNIKFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPH 60
+ + + + D+SI +WD++
Sbjct: 68 IITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTD 127
Query: 61 VDRVFIGDPLSNSIECLTWFNDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVH 120
+ + ++ + + + + S + ++ + CL
Sbjct: 128 ITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR 187
Query: 121 KKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCA-AAVR 179
RL+ +G+ I L+ I L + L +V+G ++
Sbjct: 188 D--RLVVSGSSDNTIRLWDIEC----GACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIK 241
Query: 180 VWDIHKGHAIHKMSLDKSSKFSK--NTAVWCVAFCADFTIITGDSGGFVRFWD 230
VWD+ + + + V+ + F +F I++ + WD
Sbjct: 242 VWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFD-EFQIVSSSHDDTILIWD 293
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 48.0 bits (112), Expect = 2e-06
Identities = 37/238 (15%), Positives = 68/238 (28%), Gaps = 11/238 (4%)
Query: 1 MSHMCKKRNTMGTYGVHNIKFYAPEPKVINCIACEPKSSRLAVSRA--DQSIEIWDISET 58
+ + V+ + I+ I+ + + RL V D
Sbjct: 90 IVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSG 149
Query: 59 PHVDRVFIGDPLSNSIECLTWFNDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSG-----T 113
+ V N+ R + G G V Y +S
Sbjct: 150 NSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVR 209
Query: 114 CWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTG 173
S + ++ G+++ S E L Y + + T
Sbjct: 210 DVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWLDSQKFATV 269
Query: 174 CA-AAVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWD 230
A A +RVWD+ + K +LDK ++ V + II+ G + F++
Sbjct: 270 GADATIRVWDVTTSKCVQKWTLDKQQLGNQ---QVGVVATGNGRIISLSLDGTLNFYE 324
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 46.0 bits (107), Expect = 8e-06
Identities = 32/332 (9%), Positives = 78/332 (23%), Gaps = 37/332 (11%)
Query: 29 INCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWFND--RLFS 86
I+ I P S L ++ D S+ ++ + + + C + ++
Sbjct: 14 ISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIY 73
Query: 87 GGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLL 146
G + + + K + I
Sbjct: 74 VGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYG 133
Query: 147 YEKLLDRQQGRILCTAWHSSGDYLVTGCAAA-------VRVWDIHKGHAIHKMSLDKSSK 199
+ + + V+ + + + + K
Sbjct: 134 DGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLK 193
Query: 200 FSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVKT-------------HKKD 246
+ + + D V F+D + S +
Sbjct: 194 YQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYP 253
Query: 247 ILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVK 306
+ ++ S +LY AG D + C+ + ++ + + + S V
Sbjct: 254 VNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVV--------------- 298
Query: 307 SLALHGNRLYSGGLDSYLSLSYYPPKTLVKYP 338
+A N L D + +T+
Sbjct: 299 KIACSDNILCLATSDDTFKTNAAIDQTIELNA 330
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 46.0 bits (107), Expect = 1e-05
Identities = 31/285 (10%), Positives = 69/285 (24%), Gaps = 41/285 (14%)
Query: 27 KVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPL--SNSIECLTWFND-- 82
+V+ + + + +++WDIS + V D L N I D
Sbjct: 52 EVVCAVTISNPTRHVYTG-GKGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGC 110
Query: 83 RLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISD 142
L GG ++ +D+ + +TS C ++ + N+
Sbjct: 111 TLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDL 170
Query: 143 EGLLYEKLLDRQQGRILCTAWH----------SSGDYLVTGCAAAVRVWDIHKGHAIHKM 192
+ C ++ I +
Sbjct: 171 HNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSL 230
Query: 193 SLDKSSKFSK------------------------NTAVWCVAFCAD-FTIITGDSGGFVR 227
+ ++ + V + F ++ +
Sbjct: 231 GYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLN 290
Query: 228 FWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQ 272
W G K +L+ +S D+ Y+ D ++
Sbjct: 291 AWRTPYGASIFQSK-ESSSVLSCDISVDDKYIVTGSGDKKATVYE 334
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 43.3 bits (100), Expect = 6e-05
Identities = 8/71 (11%), Positives = 24/71 (33%), Gaps = 4/71 (5%)
Query: 114 CWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTG 173
L + + + +N ++ +++ ++ +L Y+VTG
Sbjct: 268 VLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQS---KESSSVLSCDISVDDKYIVTG 324
Query: 174 CA-AAVRVWDI 183
V+++
Sbjct: 325 SGDKKATVYEV 335
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 43.3 bits (100), Expect = 7e-05
Identities = 9/90 (10%), Positives = 22/90 (24%), Gaps = 2/90 (2%)
Query: 155 QGRILCTAWHSSGDYLVTGCAAAVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCAD 214
+ + ++ TG V+VWDI +K + + +++ + D
Sbjct: 51 GEVVCAVTISNPTRHVYTGGKGCVKVWDISHPG--NKSPVSQLDCLNRDNYIRSCKLLPD 108
Query: 215 FTIITGDSGGFVRFWDGKTGVQWSDVKTHK 244
+
Sbjct: 109 GCTLIVGGEASTLSIWDLAAPTPRIKAELT 138
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 39.8 bits (91), Expect = 8e-04
Identities = 13/86 (15%), Positives = 20/86 (23%), Gaps = 5/86 (5%)
Query: 200 FSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQWS-----DVKTHKKDILALTVSE 254
+ V V + G V+ WD S D I + +
Sbjct: 48 LNHGEVVCAVTISNPTRHVYTGGKGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLP 107
Query: 255 DENYLYCAGVDPTVVCFQRTRKPQVC 280
D L G T+ +
Sbjct: 108 DGCTLIVGGEASTLSIWDLAAPTPRI 133
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 43.3 bits (100), Expect = 7e-05
Identities = 12/71 (16%), Positives = 25/71 (35%), Gaps = 6/71 (8%)
Query: 160 CTAWHSSGDYLVTGCAAAVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIIT 219
T ++ S + LV+G ++++ G +H L + +W V F +
Sbjct: 287 ITTFYVSDNILVSGSENQFNIYNLRSGKLVHANILKDAD------QIWSVNFKGKTLVAA 340
Query: 220 GDSGGFVRFWD 230
+ G
Sbjct: 341 VEKDGQSFLEI 351
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 39.9 bits (91), Expect = 8e-04
Identities = 16/140 (11%), Positives = 39/140 (27%)
Query: 74 IECLTWFNDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQG 133
I CL + ++ + +G + YD + G W L L++ T++
Sbjct: 16 ITCLQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGGILVSGSTDRT 75
Query: 134 HINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAAAVRVWDIHKGHAIHKMS 193
+ + + + + + + VW + K ++
Sbjct: 76 VRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHG 135
Query: 194 LDKSSKFSKNTAVWCVAFCA 213
+ +T F
Sbjct: 136 EEHDYPLVFHTPEENPYFVG 155
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 38.3 bits (87), Expect = 0.002
Identities = 18/277 (6%), Positives = 53/277 (19%), Gaps = 11/277 (3%)
Query: 2 SHMCKKRNTMGTYGVHNIKFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHV 61
+ + + ++ I + D ++ +W + + V
Sbjct: 72 TDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSV 131
Query: 62 DRVFIGDPLSNSIECLTWFNDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHK 121
+ NI S + +
Sbjct: 132 PDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQM 191
Query: 122 KKRLLAAGTEQGHINLFQISDEGLLYEKLLDR---------QQGRILCTAWHSSGDYLVT 172
K + +G + + +D + + L
Sbjct: 192 KCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRL 251
Query: 173 GCAAAVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGK 232
V + + F I+ S ++ +
Sbjct: 252 SDKFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGSENQFNIYNLR 311
Query: 233 TG-VQWSDVKTHKKDILALTVSEDENYLYCAGVDPTV 268
+G + +++ I ++ + D
Sbjct: 312 SGKLVHANILKDADQIWSVNFKGK-TLVAAVEKDGQS 347
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 42.6 bits (98), Expect = 1e-04
Identities = 8/81 (9%), Positives = 27/81 (33%), Gaps = 6/81 (7%)
Query: 151 LDRQQGRILCTAWHSSGDYLVTGCA-AAVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCV 209
G + W G + + A +++W++ + + + +
Sbjct: 234 NVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQ----QLGI 289
Query: 210 AFCADFTIITGDSGGFVRFWD 230
+ +++ + GF+ F +
Sbjct: 290 IWTKQ-ALVSISANGFINFVN 309
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 41.0 bits (94), Expect = 3e-04
Identities = 15/98 (15%), Positives = 36/98 (36%)
Query: 1 MSHMCKKRNTMGTYGVHNIKFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPH 60
+ T + + + P +++A + AD++I+IW+++
Sbjct: 213 IVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKV 272
Query: 61 VDRVFIGDPLSNSIECLTWFNDRLFSGGLQGFVNEYDM 98
+ +G + + + W L S GF+N +
Sbjct: 273 EKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNP 310
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 38.7 bits (88), Expect = 0.002
Identities = 24/255 (9%), Positives = 66/255 (25%), Gaps = 5/255 (1%)
Query: 19 IKFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIG---DPLSNSIE 75
+ Y P A ++ IWD ++T H+ + I P+ +
Sbjct: 51 TEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISW 110
Query: 76 CLTWFNDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHI 135
G + F + + + + + + +
Sbjct: 111 DSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNT 170
Query: 136 NLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAAAVRVWDIHKGHAIHKMSLD 195
+ + + TG + +++ G D
Sbjct: 171 VAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDD 230
Query: 196 KSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDVKTHKK-DILALTVS 253
+ + +V+ + + D T I + + ++ W+ T + + + L +
Sbjct: 231 SLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGII 290
Query: 254 EDENYLYCAGVDPTV 268
+ L + +
Sbjct: 291 WTKQALVSISANGFI 305
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 41.5 bits (95), Expect = 2e-04
Identities = 9/77 (11%), Positives = 22/77 (28%), Gaps = 7/77 (9%)
Query: 155 QGRILCTAWHSSGDYLVTGCA-AAVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCA 213
I + + G L + A + WDI G + ++ + + +
Sbjct: 12 NKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHAT------MITGIKTTS 65
Query: 214 DFTIITGDSGGFVRFWD 230
+ T ++
Sbjct: 66 KGDLFTVSWDDHLKVVP 82
|
| >d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Length = 355 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Score = 40.5 bits (93), Expect = 4e-04
Identities = 10/103 (9%), Positives = 25/103 (24%), Gaps = 11/103 (10%)
Query: 156 GRILCTAWHSSGDYLVTGCAAAVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCAD- 214
+ ++ + V V D G + K + + + D
Sbjct: 260 LDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGHE--------IDSINVSQDE 311
Query: 215 --FTIITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSED 255
+ D ++G + V +T ++
Sbjct: 312 KPLLYALSTGDKTLYIHDAESGEELRSVNQLGHGPQVITTADM 354
|
| >d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Length = 368 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Score = 38.4 bits (88), Expect = 0.002
Identities = 27/271 (9%), Positives = 56/271 (20%), Gaps = 14/271 (5%)
Query: 156 GRILCTAWHSSGDYLVTGCAAAVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCAD- 214
G A S V V+D I + L + +FS V + CA
Sbjct: 76 GSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASS 135
Query: 215 -FTIITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQR 273
+ + + +YL
Sbjct: 136 ACLLFFLFGSSAAAGLSVPGA-SDDQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAA 194
Query: 274 TRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALHGNRLYSGGLDSYLSLSYYPPKT 333
+ + ++ + G + +
Sbjct: 195 APAAAGIVGAQCTGAQNCSSQAAQAN-YPGMLVWAVASSILQGDIPAAGATMKAAIDGNE 253
Query: 334 LVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPR 393
+ + +AK + +E A + + SS + + G
Sbjct: 254 SGRKADNFRSAGFQMVAKLKNTDGI-MILTVEHSRSCLAAAENTSSVTASVGQTSGPIS- 311
Query: 394 LIVKMSAVNNATIRCSVVSNDGKYVAYSTES 424
N + + DG Y+ +
Sbjct: 312 --------NGHDSDAIIAAQDGASDNYANSA 334
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 708 | |||
| d1gxra_ | 337 | Groucho/tle1, C-terminal domain {Human (Homo sapie | 100.0 | |
| d1vyhc1 | 317 | Platelet-activating factor acetylhydrolase IB subu | 100.0 | |
| d1nr0a1 | 311 | Actin interacting protein 1 {Nematode (Caenorhabdi | 100.0 | |
| d1gxra_ | 337 | Groucho/tle1, C-terminal domain {Human (Homo sapie | 100.0 | |
| d1erja_ | 388 | Tup1, C-terminal domain {Baker's yeast (Saccharomy | 100.0 | |
| d1nexb2 | 355 | Cdc4 propeller domain {Baker's yeast (Saccharomyce | 100.0 | |
| d1k8kc_ | 371 | Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur | 100.0 | |
| d1vyhc1 | 317 | Platelet-activating factor acetylhydrolase IB subu | 100.0 | |
| d1tbga_ | 340 | beta1-subunit of the signal-transducing G protein | 100.0 | |
| d1nr0a1 | 311 | Actin interacting protein 1 {Nematode (Caenorhabdi | 100.0 | |
| d1nr0a2 | 299 | Actin interacting protein 1 {Nematode (Caenorhabdi | 100.0 | |
| d1erja_ | 388 | Tup1, C-terminal domain {Baker's yeast (Saccharomy | 100.0 | |
| d1nexb2 | 355 | Cdc4 propeller domain {Baker's yeast (Saccharomyce | 100.0 | |
| d1nr0a2 | 299 | Actin interacting protein 1 {Nematode (Caenorhabdi | 100.0 | |
| d1k8kc_ | 371 | Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur | 100.0 | |
| d2ovrb2 | 342 | F-box/WD repeat-containing protein 7, FBXW7 {Human | 100.0 | |
| d1tbga_ | 340 | beta1-subunit of the signal-transducing G protein | 100.0 | |
| d2ovrb2 | 342 | F-box/WD repeat-containing protein 7, FBXW7 {Human | 100.0 | |
| d1pgua1 | 325 | Actin interacting protein 1 {Baker's yeast (Saccha | 100.0 | |
| d1p22a2 | 293 | F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom | 100.0 | |
| d1sq9a_ | 393 | Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac | 99.98 | |
| d1pgua2 | 287 | Actin interacting protein 1 {Baker's yeast (Saccha | 99.98 | |
| d1pgua1 | 325 | Actin interacting protein 1 {Baker's yeast (Saccha | 99.97 | |
| d1p22a2 | 293 | F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom | 99.97 | |
| d1yfqa_ | 342 | Cell cycle arrest protein BUB3 {Baker's yeast (Sac | 99.97 | |
| d1pgua2 | 287 | Actin interacting protein 1 {Baker's yeast (Saccha | 99.97 | |
| d1k32a3 | 360 | Tricorn protease domain 2 {Archaeon Thermoplasma a | 99.96 | |
| d1k32a3 | 360 | Tricorn protease domain 2 {Archaeon Thermoplasma a | 99.96 | |
| d1qksa2 | 432 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 99.96 | |
| d1sq9a_ | 393 | Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac | 99.96 | |
| d1yfqa_ | 342 | Cell cycle arrest protein BUB3 {Baker's yeast (Sac | 99.95 | |
| d1hzua2 | 426 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 99.94 | |
| d1qksa2 | 432 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 99.94 | |
| d1hzua2 | 426 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 99.93 | |
| d1l0qa2 | 301 | Surface layer protein {Archaeon Methanosarcina maz | 99.9 | |
| d1l0qa2 | 301 | Surface layer protein {Archaeon Methanosarcina maz | 99.89 | |
| d1jmxb_ | 346 | Quinohemoprotein amine dehydrogenase B chain {Pseu | 99.87 | |
| d1pbyb_ | 337 | Quinohemoprotein amine dehydrogenase B chain {Para | 99.87 | |
| d1pbyb_ | 337 | Quinohemoprotein amine dehydrogenase B chain {Para | 99.86 | |
| d2madh_ | 373 | Methylamine dehydrogenase, H-chain {Gram negative | 99.85 | |
| d1jmxb_ | 346 | Quinohemoprotein amine dehydrogenase B chain {Pseu | 99.85 | |
| d2madh_ | 373 | Methylamine dehydrogenase, H-chain {Gram negative | 99.83 | |
| d1ri6a_ | 333 | Putative isomerase YbhE {Escherichia coli [TaxId: | 99.83 | |
| d1ri6a_ | 333 | Putative isomerase YbhE {Escherichia coli [TaxId: | 99.79 | |
| d2bbkh_ | 355 | Methylamine dehydrogenase, H-chain {Paracoccus den | 99.74 | |
| d2bbkh_ | 355 | Methylamine dehydrogenase, H-chain {Paracoccus den | 99.73 | |
| d2bgra1 | 470 | Dipeptidyl peptidase IV/CD26, N-terminal domain {P | 99.62 | |
| d1qnia2 | 441 | Nitrous oxide reductase, N-terminal domain {Pseudo | 99.58 | |
| d2bgra1 | 470 | Dipeptidyl peptidase IV/CD26, N-terminal domain {P | 99.58 | |
| d1qnia2 | 441 | Nitrous oxide reductase, N-terminal domain {Pseudo | 99.53 | |
| d1mdah_ | 368 | Methylamine dehydrogenase, H-chain {Paracoccus den | 99.5 | |
| d1mdah_ | 368 | Methylamine dehydrogenase, H-chain {Paracoccus den | 99.45 | |
| d1jofa_ | 365 | 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu | 99.29 | |
| d1jofa_ | 365 | 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu | 99.27 | |
| d2hqsa1 | 269 | TolB, C-terminal domain {Escherichia coli [TaxId: | 99.26 | |
| d1xfda1 | 465 | Dipeptidyl aminopeptidase-like protein 6, DPP6, N- | 99.22 | |
| d1q7fa_ | 279 | Brain tumor cg10719-pa {Fruit fly (Drosophila mela | 99.2 | |
| d1xfda1 | 465 | Dipeptidyl aminopeptidase-like protein 6, DPP6, N- | 99.16 | |
| d2hqsa1 | 269 | TolB, C-terminal domain {Escherichia coli [TaxId: | 99.1 | |
| d1rwia_ | 260 | Serine/threonine-protein kinase PknD {Mycobacteriu | 99.1 | |
| d1pjxa_ | 314 | Diisopropylfluorophosphatase (phosphotriesterase, | 99.06 | |
| d2p4oa1 | 302 | Hypothetical protein All0351 homologue {Nostoc pun | 99.05 | |
| d2p4oa1 | 302 | Hypothetical protein All0351 homologue {Nostoc pun | 99.03 | |
| d1q7fa_ | 279 | Brain tumor cg10719-pa {Fruit fly (Drosophila mela | 99.01 | |
| d2dg1a1 | 319 | Lactonase Drp35 {Staphylococcus aureus [TaxId: 128 | 98.99 | |
| d1rwia_ | 260 | Serine/threonine-protein kinase PknD {Mycobacteriu | 98.97 | |
| d2dg1a1 | 319 | Lactonase Drp35 {Staphylococcus aureus [TaxId: 128 | 98.93 | |
| d2ghsa1 | 295 | Regucalcin {Agrobacterium tumefaciens [TaxId: 358] | 98.82 | |
| d1pjxa_ | 314 | Diisopropylfluorophosphatase (phosphotriesterase, | 98.8 | |
| d1k32a2 | 281 | Tricorn protease N-terminal domain {Archaeon Therm | 98.76 | |
| d2ghsa1 | 295 | Regucalcin {Agrobacterium tumefaciens [TaxId: 358] | 98.67 | |
| d1k32a2 | 281 | Tricorn protease N-terminal domain {Archaeon Therm | 98.65 | |
| d2ad6a1 | 571 | Methanol dehydrogenase, heavy chain {Methylophilus | 98.17 | |
| d1utca2 | 327 | Clathrin heavy-chain terminal domain {Rat (Rattus | 98.17 | |
| d1npea_ | 263 | Nidogen {Mouse (Mus musculus) [TaxId: 10090]} | 98.03 | |
| d1ijqa1 | 266 | Low density lipoprotein (LDL) receptor {Human (Hom | 97.84 | |
| d1fwxa2 | 459 | Nitrous oxide reductase, N-terminal domain {Paraco | 97.83 | |
| d1npea_ | 263 | Nidogen {Mouse (Mus musculus) [TaxId: 10090]} | 97.78 | |
| d1kv9a2 | 560 | Quinoprotein alcohol dehydrogenase, N-terminal dom | 97.72 | |
| d1w6sa_ | 596 | Methanol dehydrogenase, heavy chain {Methylobacter | 97.65 | |
| d1utca2 | 327 | Clathrin heavy-chain terminal domain {Rat (Rattus | 97.6 | |
| d1kb0a2 | 573 | Quinoprotein alcohol dehydrogenase, N-terminal dom | 97.55 | |
| d1k3ia3 | 387 | Galactose oxidase, central domain {Fungi (Fusarium | 97.37 | |
| d2ad6a1 | 571 | Methanol dehydrogenase, heavy chain {Methylophilus | 97.34 | |
| d1w6sa_ | 596 | Methanol dehydrogenase, heavy chain {Methylobacter | 97.28 | |
| d1k3ia3 | 387 | Galactose oxidase, central domain {Fungi (Fusarium | 97.15 | |
| d1fwxa2 | 459 | Nitrous oxide reductase, N-terminal domain {Paraco | 97.15 | |
| d1ijqa1 | 266 | Low density lipoprotein (LDL) receptor {Human (Hom | 97.12 | |
| d1flga_ | 582 | Ethanol dehydrogenase {Pseudomonas aeruginosa [Tax | 97.03 | |
| d1kv9a2 | 560 | Quinoprotein alcohol dehydrogenase, N-terminal dom | 96.82 | |
| d1kb0a2 | 573 | Quinoprotein alcohol dehydrogenase, N-terminal dom | 96.63 | |
| d1qfma1 | 430 | Prolyl oligopeptidase, N-terminal domain {Pig (Sus | 96.54 | |
| d1qfma1 | 430 | Prolyl oligopeptidase, N-terminal domain {Pig (Sus | 96.46 | |
| d1flga_ | 582 | Ethanol dehydrogenase {Pseudomonas aeruginosa [Tax | 96.44 | |
| d1v04a_ | 340 | Serum paraoxonase/arylesterase 1, PON1 {Rabit (Ory | 95.87 | |
| d1xipa_ | 381 | Nucleoporin NUP159 {Baker's yeast (Saccharomyces c | 95.35 | |
| d1v04a_ | 340 | Serum paraoxonase/arylesterase 1, PON1 {Rabit (Ory | 95.27 | |
| d1h6la_ | 353 | Thermostable phytase (3-phytase) {Bacillus amyloli | 95.16 | |
| d1zgka1 | 288 | Kelch-like ECH-associated protein 1, KEAP1 {Human | 93.81 | |
| d1zgka1 | 288 | Kelch-like ECH-associated protein 1, KEAP1 {Human | 93.29 | |
| d1h6la_ | 353 | Thermostable phytase (3-phytase) {Bacillus amyloli | 92.04 | |
| d1crua_ | 450 | Soluble quinoprotein glucose dehydrogenase {Acinet | 90.43 | |
| d1crua_ | 450 | Soluble quinoprotein glucose dehydrogenase {Acinet | 85.97 | |
| d1jtdb_ | 273 | beta-lactamase inhibitor protein-II, BLIP-II {Stre | 85.8 | |
| d2hu7a1 | 313 | Acylamino-acid-releasing enzyme, N-terminal donain | 83.52 | |
| d1tl2a_ | 235 | Tachylectin-2 {Japanese horseshoe crab (Tachypleus | 82.87 | |
| d1tl2a_ | 235 | Tachylectin-2 {Japanese horseshoe crab (Tachypleus | 80.17 |
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-38 Score=316.48 Aligned_cols=282 Identities=15% Similarity=0.312 Sum_probs=247.8
Q ss_pred eeeeeeccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCe----EEEEEecCCCCCcEEEEEEe--CCEEEEEcC
Q psy12614 16 VHNIKFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPH----VDRVFIGDPLSNSIECLTWF--NDRLFSGGL 89 (708)
Q Consensus 16 ~~~~~~~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~----~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~ 89 (708)
.+.++.+ +|...|+|++|+|+|++||+|+ ||.|+|||+.++.. ......+|. +.|.+++|+ +++|++++.
T Consensus 42 ~~~~~~~-~H~~~V~~v~fs~~g~~latg~-dg~V~iWd~~~~~~~~~~~~~~~~~h~--~~I~~v~~s~dg~~l~s~~~ 117 (337)
T d1gxra_ 42 ARQINTL-NHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRD--NYIRSCKLLPDGCTLIVGGE 117 (337)
T ss_dssp EEEEEEE-CCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTT--SBEEEEEECTTSSEEEEEES
T ss_pred ceEEEEC-CCCCcEEEEEECCCCCEEEEEE-CCEEEEEEccCCcccceeEEeeecCCC--CcEEEEEEcCCCCEEEEeec
Confidence 3444444 8999999999999999999997 89999999976432 222445788 999999999 899999999
Q ss_pred CCcEEEEECCCC--eEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCC
Q psy12614 90 QGFVNEYDMRRL--NIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSG 167 (708)
Q Consensus 90 d~~i~vwd~~~~--~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~ 167 (708)
||+|++||+... +....+..|...+.+++|+|++.++++++.|+.|++|++.+++.. .....|...|.+++|++++
T Consensus 118 dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~~~~~~~~~--~~~~~~~~~v~~l~~s~~~ 195 (337)
T d1gxra_ 118 ASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLV--RQFQGHTDGASCIDISNDG 195 (337)
T ss_dssp SSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEE--EEECCCSSCEEEEEECTTS
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc--ccccccccccccccccccc
Confidence 999999998754 566778899999999999999999999999999999999999876 6778899999999999999
Q ss_pred CEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCeeEEEeecccc
Q psy12614 168 DYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDVKTHKK 245 (708)
Q Consensus 168 ~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~~~~~~ 245 (708)
..+++++.| .+++||+++++.+..+.. ...|.+++|+|++. +++++.+|.+++||+++++... ...|..
T Consensus 196 ~~~~~~~~d~~v~i~d~~~~~~~~~~~~--------~~~i~~l~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~-~~~~~~ 266 (337)
T d1gxra_ 196 TKLWTGGLDNTVRSWDLREGRQLQQHDF--------TSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQ-LHLHES 266 (337)
T ss_dssp SEEEEEETTSEEEEEETTTTEEEEEEEC--------SSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEEE-ECCCSS
T ss_pred cccccccccccccccccccceeeccccc--------ccceEEEEEcccccccceecccccccccccccccccc-cccccc
Confidence 999999999 999999999998876642 67899999999995 8899999999999999887654 456899
Q ss_pred CeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEEEcCCCe
Q psy12614 246 DILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSGGLDSY 323 (708)
Q Consensus 246 ~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~~~d~~ 323 (708)
.|.+++|+|++++|++++.||.|++||..+ ++ ... ...|...|.+++|+ +++|++++.|+.
T Consensus 267 ~i~~v~~s~~g~~l~s~s~Dg~i~iwd~~~--------~~--------~~~-~~~~~~~v~~~~~s~d~~~l~t~s~D~~ 329 (337)
T d1gxra_ 267 CVLSLKFAYCGKWFVSTGKDNLLNAWRTPY--------GA--------SIF-QSKESSSVLSCDISVDDKYIVTGSGDKK 329 (337)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTT--------CC--------EEE-EEECSSCEEEEEECTTSCEEEEEETTSC
T ss_pred ccceEEECCCCCEEEEEeCCCeEEEEECCC--------CC--------EEE-EccCCCCEEEEEEeCCCCEEEEEeCCCe
Confidence 999999999999999999999999999998 65 333 34588999999999 889999999999
Q ss_pred EEEEeC
Q psy12614 324 LSLSYY 329 (708)
Q Consensus 324 i~iw~~ 329 (708)
|++||+
T Consensus 330 I~vWdl 335 (337)
T d1gxra_ 330 ATVYEV 335 (337)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999986
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=1.1e-38 Score=313.65 Aligned_cols=280 Identities=13% Similarity=0.235 Sum_probs=261.3
Q ss_pred eccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEEC
Q psy12614 21 FYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDM 98 (708)
Q Consensus 21 ~~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~ 98 (708)
.+.||.+.|++++|+|++++||+|+.||+|+|||+.+++.+. .+.+|. ..|.+++|+ +.++++++.++.+.+|+.
T Consensus 12 ~L~GH~~~I~~l~~sp~~~~l~s~s~Dg~i~iWd~~~~~~~~-~~~~h~--~~V~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (317)
T d1vyhc1 12 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFER-TLKGHT--DSVQDISFDHSGKLLASCSADMTIKLWDF 88 (317)
T ss_dssp EEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCE-EECCCS--SCEEEEEECTTSSEEEEEETTSCCCEEET
T ss_pred EEcCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCEEE-EEeCCC--CcEEEEeeecccccccccccccccccccc
Confidence 578999999999999999999999999999999999998887 899999 999999999 899999999999999999
Q ss_pred CCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-e
Q psy12614 99 RRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-A 177 (708)
Q Consensus 99 ~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~ 177 (708)
...+....+..|...+.++.|+|+++.+++++.|+.+++||+.+++.. ..+.+|...+.+++|+|++++|++++.| .
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~ 166 (317)
T d1vyhc1 89 QGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCV--KTFTGHREWVRMVRPNQDGTLIASCSNDQT 166 (317)
T ss_dssp TSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEE--EEEECCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred cccccccccccccccceeeeccCCCceEEeeccCcceeEeecccceee--eEEccCCCcceeeecccCCCEEEEEeCCCe
Confidence 999999999999999999999999999999999999999999999887 6788899999999999999999999999 9
Q ss_pred EEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCC---------------------EEEEEcCCCcEEEEeCCCCee
Q psy12614 178 VRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADF---------------------TIITGDSGGFVRFWDGKTGVQ 236 (708)
Q Consensus 178 i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---------------------~l~~~~~dg~i~~wd~~~~~~ 236 (708)
|++|+..+++....+... ...+.+++|+|++ .+++++.||.|++||..++++
T Consensus 167 v~~~~~~~~~~~~~~~~~-------~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~ 239 (317)
T d1vyhc1 167 VRVWVVATKECKAELREH-------RHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMC 239 (317)
T ss_dssp EEEEETTTCCEEEEECCC-------SSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEE
T ss_pred EEEEeeccceeeEEEecC-------CCCceEEEEeeccccceeeccccceeeeeccCCceeEeccCCCEEEEEECCCCcE
Confidence 999999999988877643 7778888887753 267899999999999999999
Q ss_pred EEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCE
Q psy12614 237 WSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNR 314 (708)
Q Consensus 237 ~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~ 314 (708)
+..+.+|...|.+++++|++++|++++.||.|++||+.+ ++ ....+.+|...|++++|+ +++
T Consensus 240 ~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~--------~~--------~~~~~~~h~~~V~~~~~s~~~~~ 303 (317)
T d1vyhc1 240 LMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKN--------KR--------CMKTLNAHEHFVTSLDFHKTAPY 303 (317)
T ss_dssp EEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTT--------SC--------CCEEEECCSSCEEEEEECSSSSC
T ss_pred EEEEeCCCCCEEEEEECCCCCEEEEEECCCeEEEEECCC--------Cc--------EEEEEcCCCCCEEEEEEcCCCCE
Confidence 999999999999999999999999999999999999998 66 567888999999999999 889
Q ss_pred EEEEcCCCeEEEEe
Q psy12614 315 LYSGGLDSYLSLSY 328 (708)
Q Consensus 315 l~s~~~d~~i~iw~ 328 (708)
|++++.||.|++||
T Consensus 304 l~s~s~Dg~i~iWd 317 (317)
T d1vyhc1 304 VVTGSVDQTVKVWE 317 (317)
T ss_dssp EEEEETTSEEEEEC
T ss_pred EEEEeCCCeEEEeC
Confidence 99999999999997
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=100.00 E-value=9.5e-38 Score=304.52 Aligned_cols=277 Identities=13% Similarity=0.150 Sum_probs=241.6
Q ss_pred CCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECCCCe
Q psy12614 25 EPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMRRLN 102 (708)
Q Consensus 25 h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~~ 102 (708)
+.+.+.+++++|+|+.||.+. ++.|.+||+.+..... .+.+|. ..|++++|+ |++|++|+.||+|++||+.+++
T Consensus 16 ~r~~~~~~a~~~~g~~l~~~~-~~~v~i~~~~~~~~~~-~~~~H~--~~v~~~~~sp~g~~latg~~dg~i~iwd~~~~~ 91 (311)
T d1nr0a1 16 ARGTAVVLGNTPAGDKIQYCN-GTSVYTVPVGSLTDTE-IYTEHS--HQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTT 91 (311)
T ss_dssp CTTCCCCCEECTTSSEEEEEE-TTEEEEEETTCSSCCE-EECCCS--SCEEEEEECTTSSEEEEEETTSEEEEEESSSTT
T ss_pred CCCCeEEEEEcCCCCEEEEEe-CCEEEEEECCCCceeE-EEcCCC--CCEEEEEEeCCCCeEeccccCceEeeeeeeccc
Confidence 345677899999999999986 5589999999988776 889999 999999999 9999999999999999999876
Q ss_pred Ee--EEEeecCCceEEEEEecCCCEEEEEeC--CCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCE-EEEecCC-
Q psy12614 103 IK--SSTAVTSGTCWCLSVHKKKRLLAAGTE--QGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDY-LVTGCAA- 176 (708)
Q Consensus 103 ~~--~~~~~~~~~v~~~~~s~~~~~la~~~~--d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~-l~~~~~d- 176 (708)
.. ..+..|.+.|.+++|+|++++|++++. +..+++|++++++.. ..+.+|...|.+++|+|++++ |++++.|
T Consensus 92 ~~~~~~~~~~~~~v~~v~~s~d~~~l~~~~~~~~~~~~v~~~~~~~~~--~~l~~h~~~v~~v~~~~~~~~~l~sgs~d~ 169 (311)
T d1nr0a1 92 HILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSN--GNLTGQARAMNSVDFKPSRPFRIISGSDDN 169 (311)
T ss_dssp CCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTCCBC--BCCCCCSSCEEEEEECSSSSCEEEEEETTS
T ss_pred cccccccccccCcccccccccccccccccccccccccccccccccccc--ccccccccccccccccccceeeeccccccc
Confidence 43 567889999999999999999999886 456999999998876 778899999999999999985 7888898
Q ss_pred eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCeeEEEee-------ccccCeE
Q psy12614 177 AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDVK-------THKKDIL 248 (708)
Q Consensus 177 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~~-------~~~~~i~ 248 (708)
.|++||+++++....+.. +...|.+++|+|+++ +++++.||.|++||..+++.+..+. +|...|.
T Consensus 170 ~i~i~d~~~~~~~~~~~~-------~~~~i~~v~~~p~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~h~~~V~ 242 (311)
T d1nr0a1 170 TVAIFEGPPFKFKSTFGE-------HTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVF 242 (311)
T ss_dssp CEEEEETTTBEEEEEECC-------CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEE
T ss_pred cccccccccccccccccc-------ccccccccccCcccccccccccccccccccccccccccccccccccccccccccc
Confidence 999999999888777653 378899999999996 8899999999999999988877653 5788999
Q ss_pred EEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccc---cceEEEEEeCCEEEEEcCCCeEE
Q psy12614 249 ALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHE---GDVKSLALHGNRLYSGGLDSYLS 325 (708)
Q Consensus 249 ~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~---~~v~~l~~~~~~l~s~~~d~~i~ 325 (708)
+++|+|++++|++|+.||.|++||+++ ++ ....+..|. ..+.++.++++.|++++.||.|+
T Consensus 243 ~~~~s~~~~~l~tgs~Dg~v~iwd~~t--------~~--------~~~~l~~~~~~~~~~~~~~~~~~~l~s~s~dG~i~ 306 (311)
T d1nr0a1 243 GLTWSPDGTKIASASADKTIKIWNVAT--------LK--------VEKTIPVGTRIEDQQLGIIWTKQALVSISANGFIN 306 (311)
T ss_dssp EEEECTTSSEEEEEETTSEEEEEETTT--------TE--------EEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEE
T ss_pred ccccCCCCCEEEEEeCCCeEEEEECCC--------Cc--------EEEEEECCCCccceEEEEEecCCEEEEEECCCEEE
Confidence 999999999999999999999999998 65 555665553 34567777788999999999999
Q ss_pred EEeCC
Q psy12614 326 LSYYP 330 (708)
Q Consensus 326 iw~~~ 330 (708)
+||++
T Consensus 307 ~wd~d 311 (311)
T d1nr0a1 307 FVNPE 311 (311)
T ss_dssp EEETT
T ss_pred EEeCC
Confidence 99974
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.3e-37 Score=305.78 Aligned_cols=276 Identities=17% Similarity=0.260 Sum_probs=236.9
Q ss_pred cCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECCCCeE-----eEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEE
Q psy12614 67 GDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMRRLNI-----KSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQ 139 (708)
Q Consensus 67 ~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~~~-----~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd 139 (708)
+|. ..|.+++|+ +++|++|+ ||.|+|||+.++.. .....+|.+.|.+++|+|++++|++++.|+.|++||
T Consensus 49 ~H~--~~V~~v~fs~~g~~latg~-dg~V~iWd~~~~~~~~~~~~~~~~~h~~~I~~v~~s~dg~~l~s~~~dg~i~iwd 125 (337)
T d1gxra_ 49 NHG--EVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWD 125 (337)
T ss_dssp CCS--SCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEE
T ss_pred CCC--CcEEEEEECCCCCEEEEEE-CCEEEEEEccCCcccceeEEeeecCCCCcEEEEEEcCCCCEEEEeeccccccccc
Confidence 788 999999999 88999987 89999999987542 223347889999999999999999999999999999
Q ss_pred ccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-E
Q psy12614 140 ISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-I 217 (708)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l 217 (708)
+..........+..|...+..++|+|++.++++++.+ .|++|++.+++...... .+...+.+++|++++. +
T Consensus 126 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~~~~~~~~~~~~~-------~~~~~v~~l~~s~~~~~~ 198 (337)
T d1gxra_ 126 LAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQ-------GHTDGASCIDISNDGTKL 198 (337)
T ss_dssp CCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEEC-------CCSSCEEEEEECTTSSEE
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccc-------cccccccccccccccccc
Confidence 9876655457788899999999999999999999999 99999999998776665 3378899999999985 8
Q ss_pred EEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEE
Q psy12614 218 ITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVN 297 (708)
Q Consensus 218 ~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~ 297 (708)
++++.||.+++||+++++.+..+. |...|.+++|+|++++|++++.|+.+++|++.. ++ ...
T Consensus 199 ~~~~~d~~v~i~d~~~~~~~~~~~-~~~~i~~l~~~~~~~~l~~~~~d~~i~i~d~~~--------~~---------~~~ 260 (337)
T d1gxra_ 199 WTGGLDNTVRSWDLREGRQLQQHD-FTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNK--------PD---------KYQ 260 (337)
T ss_dssp EEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECTTSSEEEEEETTSCEEEEETTS--------SC---------EEE
T ss_pred ccccccccccccccccceeecccc-cccceEEEEEcccccccceeccccccccccccc--------cc---------ccc
Confidence 899999999999999999887775 789999999999999999999999999999988 54 345
Q ss_pred EeccccceEEEEEe--CCEEEEEcCCCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEEEcCCeEEEEEecCCCCC
Q psy12614 298 RVIHEGDVKSLALH--GNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQST 375 (708)
Q Consensus 298 ~~~~~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~~ 375 (708)
...|...|.+++|+ +++|++++.|+.|++||+.+..
T Consensus 261 ~~~~~~~i~~v~~s~~g~~l~s~s~Dg~i~iwd~~~~~------------------------------------------ 298 (337)
T d1gxra_ 261 LHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGA------------------------------------------ 298 (337)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC------------------------------------------
T ss_pred ccccccccceEEECCCCCEEEEEeCCCeEEEEECCCCC------------------------------------------
Confidence 67889999999998 7899999999999998875432
Q ss_pred CCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEEE-cCCceEEEEEE
Q psy12614 376 DLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYS-TESCVRLHSLD 432 (708)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~-~d~~i~i~~~~ 432 (708)
.+.. ..+...|.+++|+|++++|+++ .|++|+|||+-
T Consensus 299 ------------------~~~~--~~~~~~v~~~~~s~d~~~l~t~s~D~~I~vWdl~ 336 (337)
T d1gxra_ 299 ------------------SIFQ--SKESSSVLSCDISVDDKYIVTGSGDKKATVYEVI 336 (337)
T ss_dssp ------------------EEEE--EECSSCEEEEEECTTSCEEEEEETTSCEEEEEEE
T ss_pred ------------------EEEE--ccCCCCEEEEEEeCCCCEEEEEeCCCeEEEEEEE
Confidence 1111 2466889999999999999985 59999999973
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=5.6e-37 Score=311.21 Aligned_cols=285 Identities=17% Similarity=0.300 Sum_probs=241.4
Q ss_pred CCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEe------------------cCCCCCcEEEEEEe--CCE
Q psy12614 24 PEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFI------------------GDPLSNSIECLTWF--NDR 83 (708)
Q Consensus 24 ~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~------------------~h~~~~~v~~l~~~--~~~ 83 (708)
+|.+.|+|++|||||++||+|+ |+.|+|||+.+++.+. .+. +|. ..|.+++|+ +++
T Consensus 60 ~H~~~V~~l~fs~dg~~lasg~-d~~i~iW~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--~~V~~l~~s~~~~~ 135 (388)
T d1erja_ 60 DHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVA-RLSDDSAANKDPENLNTSSSPSSD--LYIRSVCFSPDGKF 135 (388)
T ss_dssp ECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEE-EECC-----------------CCC--CBEEEEEECTTSSE
T ss_pred CCCCcEEEEEECCCCCEEEEEe-CCeEEEEEecccceEe-eecccccccccccccccccccCCC--CCEEEEEECCCCCc
Confidence 6999999999999999999986 8999999999987765 333 455 779999999 899
Q ss_pred EEEEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEE
Q psy12614 84 LFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAW 163 (708)
Q Consensus 84 l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~ 163 (708)
|++|+.||.|++||...++.+..+.+|...|.++++++++..+++++.++.+++||..+.... .....+...+....+
T Consensus 136 l~s~~~dg~v~i~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~--~~~~~~~~~~~~~~~ 213 (388)
T d1erja_ 136 LATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCS--LTLSIEDGVTTVAVS 213 (388)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEE--EEEECSSCEEEEEEC
T ss_pred ceecccccccccccccccccccccccccccccccccccccccccccccceeeeeeeccccccc--ccccccccccccccc
Confidence 999999999999999999999999999999999999999999999999999999999988776 344444554544555
Q ss_pred CCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCee-----
Q psy12614 164 HSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQ----- 236 (708)
Q Consensus 164 s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~----- 236 (708)
.+++++|++++.| .|++||..++.....+.........|...|.+++|+|+++ +++++.||.|++||+.++..
T Consensus 214 ~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~ 293 (388)
T d1erja_ 214 PGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSK 293 (388)
T ss_dssp STTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC----------
T ss_pred CCCCCeEEEEcCCCeEEEeecccCccceeeccccccccCCCCCEEEEEECCCCCEEEEEECCCcEEEEeccCCccccccc
Confidence 5688999999999 9999999999988777543211113478899999999995 89999999999999876543
Q ss_pred -------EEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEE
Q psy12614 237 -------WSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLA 309 (708)
Q Consensus 237 -------~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~ 309 (708)
......|...|.+++|+|++++|++|+.||.|++||+.+ ++ ....+.+|.+.|.+++
T Consensus 294 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~sg~~dg~i~vwd~~~--------~~--------~~~~l~~H~~~V~~~~ 357 (388)
T d1erja_ 294 TPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKS--------GN--------PLLMLQGHRNSVISVA 357 (388)
T ss_dssp -----CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTT--------CC--------EEEEEECCSSCEEEEE
T ss_pred cccccceeeecccccceEEEEEECCCCCEEEEEeCCCEEEEEECCC--------Cc--------EEEEEeCCCCCEEEEE
Confidence 334556889999999999999999999999999999998 76 7788999999999998
Q ss_pred Ee--------CCEEEEEcCCCeEEEEeCC
Q psy12614 310 LH--------GNRLYSGGLDSYLSLSYYP 330 (708)
Q Consensus 310 ~~--------~~~l~s~~~d~~i~iw~~~ 330 (708)
+. +.+|++|+.||+|++|+++
T Consensus 358 ~~~~~~~spd~~~l~s~s~Dg~I~iW~~~ 386 (388)
T d1erja_ 358 VANGSSLGPEYNVFATGSGDCKARIWKYK 386 (388)
T ss_dssp ECSSCTTCTTCEEEEEEETTSEEEEEEEE
T ss_pred EecCcccCCCCCEEEEEeCCCEEEEEeee
Confidence 75 5789999999999999974
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=4.8e-36 Score=299.98 Aligned_cols=328 Identities=15% Similarity=0.151 Sum_probs=262.2
Q ss_pred EEEEecCCCCCc-EEEEEEeCCEEEEEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEc
Q psy12614 62 DRVFIGDPLSNS-IECLTWFNDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQI 140 (708)
Q Consensus 62 ~~~~~~h~~~~~-v~~l~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~ 140 (708)
+.+|.||. .. |+|++|++++|++|+.||+|++||+.+++++.++.+|.+.|++++|+|+ .+|++|+.|+.|++|++
T Consensus 5 ~~tL~GH~--~~vitc~~~~~~~l~tgs~Dg~i~vWd~~~~~~~~~l~~H~~~V~~l~~s~~-~~l~s~s~D~~i~iw~~ 81 (355)
T d1nexb2 5 RTTLRGHM--TSVITCLQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHG-GILVSGSTDRTVRVWDI 81 (355)
T ss_dssp EEEEECCS--SSCEEEEEEETTEEEEEETTTEEEEEETTTTEEEEEEECCSSCEEEEEEETT-TEEEEEETTCCEEEEET
T ss_pred cEEECCcC--CCcEEEEEECCCEEEEEeCCCeEEEEECCCCcEEEEEECCCCCEEEEEEcCC-CEEEEEecccccccccc
Confidence 35899998 65 6888888999999999999999999999999999999999999999986 58999999999999999
Q ss_pred cCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccC---------C-------CCCc
Q psy12614 141 SDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSS---------K-------FSKN 203 (708)
Q Consensus 141 ~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~---------~-------~~~~ 203 (708)
...+.........+........+++++.++++++.| .|++||+.++............ . ..+.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (355)
T d1nexb2 82 KKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHM 161 (355)
T ss_dssp TTTEEEEEECCCSSCEEEEEEEEETTEEEEEEEETTSEEEEEECCC-----------CCCEEESCTTTCTTEEEEEECCS
T ss_pred cccccccccccccccccccccccccccceeeeecCCCcEEEEEccCCceeccccccceeccceeccccccceeeeeeecc
Confidence 998887555555556667778889999999999999 9999999876654433221100 0 0011
Q ss_pred eeEEEEEEccCC-EEEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccC
Q psy12614 204 TAVWCVAFCADF-TIITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCST 282 (708)
Q Consensus 204 ~~v~~~~~~~~~-~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~ 282 (708)
..+. .+.+++ .++++..|+.|++||+.+++.+....++...+.++.++|+++++++++.|+.|++|+..+
T Consensus 162 ~~v~--~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~i~d~~~------- 232 (355)
T d1nexb2 162 ASVR--TVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLEN------- 232 (355)
T ss_dssp SCEE--EEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTT-------
T ss_pred cccc--ccccccceeeeecccceeeeeecccccceeeeeccccccccccccccceeeecccccceEEeeeccc-------
Confidence 2222 334455 488999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCCCCcceEEeEEEeccccceEEEEEeCCEEEEEcCCCeEEEEeCCCCceeecCccCCCC-ceEEEEcCCcEEEEEcC
Q psy12614 283 SGPEQGSSVWVRSVNRVIHEGDVKSLALHGNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQS-TPVSLAKDIQHVLLQYT 361 (708)
Q Consensus 283 ~g~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~-~~~~~s~~~~~l~~~~~ 361 (708)
+. ....+.+|...|.++++++++|++++.||.|++||+.+....... +.... ....+++++++++++.|
T Consensus 233 -~~--------~~~~~~~h~~~v~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~g~d 302 (355)
T d1nexb2 233 -GE--------LMYTLQGHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFSY-HHTNLSAITTFYVSDNILVSGSE 302 (355)
T ss_dssp -CC--------EEEEECCCSSCCCEEEECSSEEEEECTTSEEEEEETTTCCEEEEE-ECTTCCCCCEEEECSSEEEEEET
T ss_pred -cc--------cccccccccccccccccccceeeeeecccccccccccccceeccc-ccCCceEEEEEcCCCCEEEEEeC
Confidence 76 677888999999999999999999999999999999877533222 23333 34567899999999999
Q ss_pred CeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEE-EcCCceEEEEEE
Q psy12614 362 SHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAY-STESCVRLHSLD 432 (708)
Q Consensus 362 ~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~-~~d~~i~i~~~~ 432 (708)
+.|++||+.+++ .+.....+|...|.+++|+|+. ++++ +.||+++||.++
T Consensus 303 ~~i~vwd~~tg~--------------------~~~~~~~~~~~~V~~v~~~~~~-~~~~~s~dg~~~l~~~d 353 (355)
T d1nexb2 303 NQFNIYNLRSGK--------------------LVHANILKDADQIWSVNFKGKT-LVAAVEKDGQSFLEILD 353 (355)
T ss_dssp TEEEEEETTTCC--------------------BCCSCTTTTCSEEEEEEEETTE-EEEEEESSSCEEEEEEE
T ss_pred CEEEEEECCCCC--------------------EEEEEecCCCCCEEEEEEcCCe-EEEEEECCCcEEEEEEe
Confidence 999999999876 2222334678899999999874 5555 569998887765
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=3.5e-36 Score=302.38 Aligned_cols=300 Identities=15% Similarity=0.195 Sum_probs=234.6
Q ss_pred CCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCe-EEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECCCC
Q psy12614 25 EPKVINCIACEPKSSRLAVSRADQSIEIWDISETPH-VDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMRRL 101 (708)
Q Consensus 25 h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~-~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~ 101 (708)
+.++|+|++|+|||++||+|+.||.|+|||..+++. ....+.+|. ++|.+++|+ +++|++++.|++|++||+.++
T Consensus 6 ~~~pIt~~~~s~dg~~la~~~~~~~i~iw~~~~~~~~~~~~l~gH~--~~V~~l~fsp~~~~l~s~s~D~~i~vWd~~~~ 83 (371)
T d1k8kc_ 6 LVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHN--GQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGR 83 (371)
T ss_dssp CSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCS--SCEEEEEEETTTTEEEEEETTSCEEEEEEETT
T ss_pred CCCCeEEEEECCCCCEEEEEeCCCEEEEEECCCCCEEEEEEecCCC--CCEEEEEECCCCCEEEEEECCCeEEEEeeccc
Confidence 457899999999999999999999999999988763 234789999 999999999 899999999999999999887
Q ss_pred eEe--EEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcE--EEEEecccccccEEEEEECCCCCEEEEecCC-
Q psy12614 102 NIK--SSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGL--LYEKLLDRQQGRILCTAWHSSGDYLVTGCAA- 176 (708)
Q Consensus 102 ~~~--~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~--~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d- 176 (708)
... ..+.+|...|.+++|+|++++|++++.|+.|++|++..... ........|...|.+++|+|++++|++++.|
T Consensus 84 ~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~s~d~~i~i~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~D~ 163 (371)
T d1k8kc_ 84 TWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDF 163 (371)
T ss_dssp EEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTS
T ss_pred ccccccccccccccccccccccccccceeecccCcceeeeeecccccccccccccccccccccccccccccceeccccCc
Confidence 644 44567889999999999999999999999999999886543 2335567789999999999999999999999
Q ss_pred eEEEEEcCCCceEE---------------EEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCeeEEEe
Q psy12614 177 AVRVWDIHKGHAIH---------------KMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDV 240 (708)
Q Consensus 177 ~i~iwd~~~~~~~~---------------~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~ 240 (708)
.|++|+........ .+... . .+...|.+++|+|+++ +++++.|+.|++||+.+++.+..+
T Consensus 164 ~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~~~~~ 239 (371)
T d1k8kc_ 164 KCRIFSAYIKEVEERPAPTPWGSKMPFGELMFES-S---SSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATL 239 (371)
T ss_dssp CEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEEC-C---CCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEE
T ss_pred EEEEEeeccCccccccccccccccccceeeeeec-c---CccCcEEEEEeecccccccccccCCcceEEeeecccceeee
Confidence 99999986533111 01111 1 4478899999999995 889999999999999999999999
Q ss_pred eccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCC-----C-------------------CC-cceEEe
Q psy12614 241 KTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPE-----Q-------------------GS-SVWVRS 295 (708)
Q Consensus 241 ~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~-----~-------------------~~-~~~~~~ 295 (708)
..|..+|.+++|+|++++|++| .|+.+++|............+.. . .. ......
T Consensus 240 ~~~~~~v~s~~fs~d~~~la~g-~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (371)
T d1k8kc_ 240 ASETLPLLAVTFITESSLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGA 318 (371)
T ss_dssp ECSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC---------C
T ss_pred ecccccceeeeecCCCCEEEEE-cCCceEEEEeeCCCceEEEeeeecCccccccccccceeeEecccceeEEeccccccc
Confidence 9999999999999999777655 57777777654421110000000 0 00 000001
Q ss_pred EEEeccccceEEEEEe------CCEEEEEcCCCeEEEEeCCC
Q psy12614 296 VNRVIHEGDVKSLALH------GNRLYSGGLDSYLSLSYYPP 331 (708)
Q Consensus 296 ~~~~~~~~~v~~l~~~------~~~l~s~~~d~~i~iw~~~~ 331 (708)
.....|.+.|.++++. ...++|++.||.|++||+++
T Consensus 319 ~~~~~H~~~I~~i~~~~~~~~~~~~~~T~g~Dg~v~iW~~~~ 360 (371)
T d1k8kc_ 319 GLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRS 360 (371)
T ss_dssp CCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHHH
T ss_pred eecccccCCEEEEEEeCCCCcceEEEEEEcCCCeEEEEeCCc
Confidence 1112488899999886 24689999999999999854
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=1.5e-35 Score=291.10 Aligned_cols=279 Identities=15% Similarity=0.238 Sum_probs=251.9
Q ss_pred EEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEcc
Q psy12614 64 VFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQIS 141 (708)
Q Consensus 64 ~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~ 141 (708)
.|.||. ++|++|+|+ +++|++|+.||+|++||+++++++..+.+|...|.+++|+|++.++++++.++.+.+|+..
T Consensus 12 ~L~GH~--~~I~~l~~sp~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (317)
T d1vyhc1 12 ALSGHR--SPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ 89 (317)
T ss_dssp EEECCS--SCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETT
T ss_pred EEcCCC--CCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCEEEEEeCCCCcEEEEeeeccccccccccccccccccccc
Confidence 799999 999999999 8999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEE
Q psy12614 142 DEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IIT 219 (708)
Q Consensus 142 ~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~ 219 (708)
..+.. ..+..|...+.++.|+|+++.+++++.| .+++||+.+++.+..+... ...+.+++|+|++. +++
T Consensus 90 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~l~~ 160 (317)
T d1vyhc1 90 GFECI--RTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGH-------REWVRMVRPNQDGTLIAS 160 (317)
T ss_dssp SSCEE--ECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECC-------SSCEEEEEECTTSSEEEE
T ss_pred ccccc--cccccccccceeeeccCCCceEEeeccCcceeEeecccceeeeEEccC-------CCcceeeecccCCCEEEE
Confidence 88876 6788899999999999999999999999 9999999999988887643 78899999999995 889
Q ss_pred EcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCC--------------------CEEEEEecCCeEEEEEccCCccc
Q psy12614 220 GDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDE--------------------NYLYCAGVDPTVVCFQRTRKPQV 279 (708)
Q Consensus 220 ~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~--------------------~~l~~~~~dg~i~iw~~~~~~~~ 279 (708)
++.|+.|++|+..+++....+.+|...+.+++++|++ ..+++++.|+.|++|+..+
T Consensus 161 ~~~d~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~---- 236 (317)
T d1vyhc1 161 CSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVST---- 236 (317)
T ss_dssp EETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTT----
T ss_pred EeCCCeEEEEeeccceeeEEEecCCCCceEEEEeeccccceeeccccceeeeeccCCceeEeccCCCEEEEEECCC----
Confidence 9999999999999999999999999999999998754 4688999999999999998
Q ss_pred ccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEEEcCCCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEE
Q psy12614 280 CSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVL 357 (708)
Q Consensus 280 ~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~ 357 (708)
++ ....+.+|...|.+++++ +++|++++.||.|++||+.+..
T Consensus 237 ----~~--------~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~------------------------ 280 (317)
T d1vyhc1 237 ----GM--------CLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKR------------------------ 280 (317)
T ss_dssp ----TE--------EEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSC------------------------
T ss_pred ----Cc--------EEEEEeCCCCCEEEEEECCCCCEEEEEECCCeEEEEECCCCc------------------------
Confidence 65 677888999999999998 8899999999999999886542
Q ss_pred EEcCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEEE-cCCceEEEE
Q psy12614 358 LQYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYS-TESCVRLHS 430 (708)
Q Consensus 358 ~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~-~d~~i~i~~ 430 (708)
+.....+|...|++++|+|++++|+++ .|++|+|||
T Consensus 281 -------------------------------------~~~~~~~h~~~V~~~~~s~~~~~l~s~s~Dg~i~iWd 317 (317)
T d1vyhc1 281 -------------------------------------CMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 317 (317)
T ss_dssp -------------------------------------CCEEEECCSSCEEEEEECSSSSCEEEEETTSEEEEEC
T ss_pred -------------------------------------EEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEeC
Confidence 122234677889999999999999985 599999996
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=9.7e-35 Score=288.67 Aligned_cols=290 Identities=15% Similarity=0.249 Sum_probs=253.6
Q ss_pred CccceeeeeeeeccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEE
Q psy12614 10 TMGTYGVHNIKFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSG 87 (708)
Q Consensus 10 ~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~ 87 (708)
.+....++..+.+.||.+.|++++|+|++++||+|+.||+|+|||+.+++.+. .+.+|. ..|.+++|+ +.+++++
T Consensus 39 ~~~~~~~~~~~tL~GH~~~I~~l~~s~~~~~l~sgs~Dg~v~iWd~~~~~~~~-~~~~~~--~~v~~v~~~~~~~~l~~~ 115 (340)
T d1tbga_ 39 PVGRIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVH-AIPLRS--SWVMTCAYAPSGNYVACG 115 (340)
T ss_dssp CCCCCCCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEE-EEECSC--SCEEEEEECTTSSEEEEE
T ss_pred cccccceeeeEEECCCCCCEEEEEECCCCCEEEEEECCCceeeeecccceeEE-EEeccc--ccEEeeEeeccceeeeee
Confidence 33445566778899999999999999999999999999999999999998876 899999 999999999 8999999
Q ss_pred cCCCcEEEEECCCC----eEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEE
Q psy12614 88 GLQGFVNEYDMRRL----NIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAW 163 (708)
Q Consensus 88 ~~d~~i~vwd~~~~----~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~ 163 (708)
+.|+.+.+|+.... .....+.+|........... +..++....+.....+........ .....+...+....+
T Consensus 116 ~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 192 (340)
T d1tbga_ 116 GLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLD-DNQIVTSSGDTTCALWDIETGQQT--TTFTGHTGDVMSLSL 192 (340)
T ss_dssp ETTCCEEEEESSSSCSCCCEEEEECCCSSCEEEEEEEE-TTEEEEEETTTEEEEEETTTTEEE--EEEECCSSCEEEEEE
T ss_pred cccceeecccccccccccccceeccccccccccccccc-cccccccccccccccccccccccc--ccccccceeEeeecc
Confidence 99999999997764 35556777777666655554 456777788999999998877665 555667788999999
Q ss_pred CCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCeeEEEe-
Q psy12614 164 HSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDV- 240 (708)
Q Consensus 164 s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~- 240 (708)
.+.+.++++++.| .|++||+++++.+..+.. |...|.+++|+|++. +++++.||.|++||+.....+..+
T Consensus 193 ~~~~~~~~~~~~d~~v~i~d~~~~~~~~~~~~-------h~~~i~~v~~~p~~~~l~s~s~d~~i~~~~~~~~~~~~~~~ 265 (340)
T d1tbga_ 193 APDTRLFVSGACDASAKLWDVREGMCRQTFTG-------HESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYS 265 (340)
T ss_dssp CTTSSEEEEEETTTEEEEEETTTTEEEEEECC-------CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEEC
T ss_pred ccccceeEEeecCceEEEEECCCCcEEEEEeC-------CCCCeEEEEECCCCCEEEEEeCCCeEEEEeecccccccccc
Confidence 9999999999999 999999999999888763 388999999999995 889999999999999998877665
Q ss_pred -eccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEE
Q psy12614 241 -KTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYS 317 (708)
Q Consensus 241 -~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s 317 (708)
..+...|.+++|+|++++|++|+.||.|++||+.+ ++ ....+.+|.+.|.+++|+ +.+|++
T Consensus 266 ~~~~~~~i~~~~~s~~~~~l~~g~~dg~i~iwd~~~--------~~--------~~~~~~~H~~~V~~l~~s~d~~~l~s 329 (340)
T d1tbga_ 266 HDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALK--------AD--------RAGVLAGHDNRVSCLGVTDDGMAVAT 329 (340)
T ss_dssp CTTCCSCEEEEEECSSSCEEEEEETTSCEEEEETTT--------CC--------EEEEECCCSSCEEEEEECTTSSCEEE
T ss_pred cccccCceEEEEECCCCCEEEEEECCCEEEEEECCC--------Cc--------EEEEEcCCCCCEEEEEEeCCCCEEEE
Confidence 35667899999999999999999999999999998 76 778889999999999999 789999
Q ss_pred EcCCCeEEEEe
Q psy12614 318 GGLDSYLSLSY 328 (708)
Q Consensus 318 ~~~d~~i~iw~ 328 (708)
|+.||.|++||
T Consensus 330 ~s~Dg~v~iWd 340 (340)
T d1tbga_ 330 GSWDSFLKIWN 340 (340)
T ss_dssp EETTSCEEEEC
T ss_pred EccCCEEEEeC
Confidence 99999999997
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=100.00 E-value=6.8e-36 Score=291.30 Aligned_cols=253 Identities=10% Similarity=0.190 Sum_probs=218.9
Q ss_pred eeeeccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeE-EEEEecCCCCCcEEEEEEe--CCEEEEEcC--CCc
Q psy12614 18 NIKFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHV-DRVFIGDPLSNSIECLTWF--NDRLFSGGL--QGF 92 (708)
Q Consensus 18 ~~~~~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~-~~~~~~h~~~~~v~~l~~~--~~~l~s~~~--d~~ 92 (708)
..+.+.+|.+.|++++|+|+|++||+|+.||.|+|||+.++... ...+.+|. .+|.+++|+ +++|++++. +..
T Consensus 50 ~~~~~~~H~~~v~~~~~sp~g~~latg~~dg~i~iwd~~~~~~~~~~~~~~~~--~~v~~v~~s~d~~~l~~~~~~~~~~ 127 (311)
T d1nr0a1 50 DTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFS--GPVKDISWDSESKRIAAVGEGRERF 127 (311)
T ss_dssp CCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSS--SCEEEEEECTTSCEEEEEECCSSCS
T ss_pred eeEEEcCCCCCEEEEEEeCCCCeEeccccCceEeeeeeecccccccccccccc--Ccccccccccccccccccccccccc
Confidence 34567899999999999999999999999999999999987643 34688999 999999999 888888875 566
Q ss_pred EEEEECCCCeEeEEEeecCCceEEEEEecCCCE-EEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEE
Q psy12614 93 VNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRL-LAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLV 171 (708)
Q Consensus 93 i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~-la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~ 171 (708)
+++|++++++....+.+|...|++++|+|++++ |++|+.|+.|++||+++++.. ..+..|...|.++.|+|++++|+
T Consensus 128 ~~v~~~~~~~~~~~l~~h~~~v~~v~~~~~~~~~l~sgs~d~~i~i~d~~~~~~~--~~~~~~~~~i~~v~~~p~~~~l~ 205 (311)
T d1nr0a1 128 GHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFK--STFGEHTKFVHSVRYNPDGSLFA 205 (311)
T ss_dssp EEEEETTTCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEE--EEECCCSSCEEEEEECTTSSEEE
T ss_pred ccccccccccccccccccccccccccccccceeeecccccccccccccccccccc--cccccccccccccccCccccccc
Confidence 999999999999999999999999999999985 788999999999999998877 67888999999999999999999
Q ss_pred EecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCeeEEEeecccc-CeE
Q psy12614 172 TGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDVKTHKK-DIL 248 (708)
Q Consensus 172 ~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~~~~~~-~i~ 248 (708)
+++.| .|++||+.++.....+........+|...|.+++|+|+++ |++|+.||.|++||+++++++.++..|.. ...
T Consensus 206 ~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~tgs~Dg~v~iwd~~t~~~~~~l~~~~~~~~~ 285 (311)
T d1nr0a1 206 STGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQ 285 (311)
T ss_dssp EEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGC
T ss_pred cccccccccccccccccccccccccccccccccccccccccCCCCCEEEEEeCCCeEEEEECCCCcEEEEEECCCCccce
Confidence 99999 9999999999888877654322224588999999999995 89999999999999999999998876543 223
Q ss_pred EEEEeCCCCEEEEEecCCeEEEEEcc
Q psy12614 249 ALTVSEDENYLYCAGVDPTVVCFQRT 274 (708)
Q Consensus 249 ~~~~s~~~~~l~~~~~dg~i~iw~~~ 274 (708)
.+.+.++++.|++++.||.|++||.+
T Consensus 286 ~~~~~~~~~~l~s~s~dG~i~~wd~d 311 (311)
T d1nr0a1 286 QLGIIWTKQALVSISANGFINFVNPE 311 (311)
T ss_dssp EEEEEECSSCEEEEETTCCEEEEETT
T ss_pred EEEEEecCCEEEEEECCCEEEEEeCC
Confidence 34444556679999999999999974
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=100.00 E-value=8.6e-36 Score=290.46 Aligned_cols=284 Identities=15% Similarity=0.170 Sum_probs=230.0
Q ss_pred eeeeccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe-CCEEEEEcCCCcEEEE
Q psy12614 18 NIKFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF-NDRLFSGGLQGFVNEY 96 (708)
Q Consensus 18 ~~~~~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~-~~~l~s~~~d~~i~vw 96 (708)
..+.+.||.+.|++++|+||+++||+|+.||.|++||+.+++.+.....+|. ..|.+++|+ ...+++++.|+.+++|
T Consensus 4 ~~~~~~GH~~~V~~l~~s~dg~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~h~--~~v~~v~~~~~g~~~~~~~d~~v~~~ 81 (299)
T d1nr0a2 4 IDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHA--TMITGIKTTSKGDLFTVSWDDHLKVV 81 (299)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCS--SCEEEEEECTTSCEEEEETTTEEEEE
T ss_pred cceEcCCCCCCcEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCC--CcEEEEEeeccceeecccceeeEEEe
Confidence 3568899999999999999999999999999999999999988763335788 999999999 5567888889999999
Q ss_pred ECCCCeE---eEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEe
Q psy12614 97 DMRRLNI---KSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTG 173 (708)
Q Consensus 97 d~~~~~~---~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~ 173 (708)
+...... ......+...+.+++|+|+++++++++ ++.+++|+... .. ... ....+.+++|+|++++|+++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~-~~~i~~~~~~~--~~--~~~--~~~~~~~~~~s~~~~~l~~g 154 (299)
T d1nr0a2 82 PAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAAC-YKHIAIYSHGK--LT--EVP--ISYNSSCVALSNDKQFVAVG 154 (299)
T ss_dssp CSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEE-SSEEEEEETTE--EE--EEE--CSSCEEEEEECTTSCEEEEE
T ss_pred ccCCccccccccccccccccccccccccccccccccc-ccccccccccc--cc--ccc--cccccccccccccccccccc
Confidence 9876432 223446778899999999999877665 56899998542 22 222 24457899999999999999
Q ss_pred cCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCeeE---EEeeccccCeE
Q psy12614 174 CAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQW---SDVKTHKKDIL 248 (708)
Q Consensus 174 ~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~---~~~~~~~~~i~ 248 (708)
+.+ .|++||+++++........ +...|.+++|+|++. +++++.++.|++||+.++... ..+.+|...|.
T Consensus 155 ~~dg~i~~~d~~~~~~~~~~~~~------~~~~i~~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~h~~~v~ 228 (299)
T d1nr0a2 155 GQDSKVHVYKLSGASVSEVKTIV------HPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVA 228 (299)
T ss_dssp ETTSEEEEEEEETTEEEEEEEEE------CSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCCCCCCCCSSCEE
T ss_pred ccccccccccccccccccccccc------ccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 999 9999999888765544433 378899999999995 889999999999999877654 34567899999
Q ss_pred EEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEE-eccccceEEEEEe-CCEEEEEcCCCeEEE
Q psy12614 249 ALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNR-VIHEGDVKSLALH-GNRLYSGGLDSYLSL 326 (708)
Q Consensus 249 ~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~v~~l~~~-~~~l~s~~~d~~i~i 326 (708)
+++|+|++++|++|+.||.|++||+.+ +. .. ..... ..+...+.++.+. +++|++++.|+.|++
T Consensus 229 ~l~~s~~~~~l~sgs~dg~i~iwd~~~--------~~----~~--~~~~~~~~~~~~v~~~~~~~~~~l~s~s~D~~i~i 294 (299)
T d1nr0a2 229 CVSWSPDNVRLATGSLDNSVIVWNMNK--------PS----DH--PIIIKGAHAMSSVNSVIWLNETTIVSAGQDSNIKF 294 (299)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEETTC--------TT----SC--CEEETTSSTTSCEEEEEEEETTEEEEEETTSCEEE
T ss_pred cccccccccceEEEcCCCEEEEEECCC--------CC----cc--eEEEecCCCCCcEEEEEECCCCEEEEEeCCCEEEE
Confidence 999999999999999999999999987 42 00 11222 2344567777777 899999999999999
Q ss_pred EeCC
Q psy12614 327 SYYP 330 (708)
Q Consensus 327 w~~~ 330 (708)
||+.
T Consensus 295 Wdl~ 298 (299)
T d1nr0a2 295 WNVP 298 (299)
T ss_dssp EECC
T ss_pred Eecc
Confidence 9983
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=2.3e-34 Score=291.77 Aligned_cols=315 Identities=17% Similarity=0.257 Sum_probs=244.8
Q ss_pred EEEEeCCCcEEEEeCCCCCeEEE---EEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECCCCeEeEEEe-------
Q psy12614 41 LAVSRADQSIEIWDISETPHVDR---VFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMRRLNIKSSTA------- 108 (708)
Q Consensus 41 la~~~~dg~v~iwd~~~~~~~~~---~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~~~~~~~~------- 108 (708)
...+..++.+.+|+....+.... ...+|. +.|++|+|+ |++|++|+ |++|++||+.+++.+..+.
T Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~H~--~~V~~l~fs~dg~~lasg~-d~~i~iW~~~~~~~~~~~~~~~~~~~ 107 (388)
T d1erja_ 31 ALKKQTNDYYILYNPALPREIDVELHKSLDHT--SVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANK 107 (388)
T ss_dssp TSEEECSSCEEEECTTSCCCEEEEEEEEEECS--SCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC------
T ss_pred ccccCCCCcEEEeCCCCCcceeeeeEeeCCCC--CcEEEEEECCCCCEEEEEe-CCeEEEEEecccceEeeecccccccc
Confidence 34567788999999876554322 223699 999999999 88999886 8999999999998877664
Q ss_pred -----------ecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-
Q psy12614 109 -----------VTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA- 176 (708)
Q Consensus 109 -----------~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d- 176 (708)
.|...|++++|+|++++|++|+.||.|++||...++.. ..+.+|...|.+++|++++..+++++.+
T Consensus 108 ~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~s~~~dg~v~i~~~~~~~~~--~~~~~h~~~v~~~~~~~~~~~~~~~~~~~ 185 (388)
T d1erja_ 108 DPENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIV--MILQGHEQDIYSLDYFPSGDKLVSGSGDR 185 (388)
T ss_dssp -----------CCCCBEEEEEECTTSSEEEEEETTSCEEEEETTTTEEE--EEECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred cccccccccccCCCCCEEEEEECCCCCcceecccccccccccccccccc--cccccccccccccccccccccccccccce
Confidence 35667999999999999999999999999999999887 6788899999999999999999999999
Q ss_pred eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEcc-CCE-EEEEcCCCcEEEEeCCCCeeEEEe-------eccccCe
Q psy12614 177 AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCA-DFT-IITGDSGGFVRFWDGKTGVQWSDV-------KTHKKDI 247 (708)
Q Consensus 177 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~-l~~~~~dg~i~~wd~~~~~~~~~~-------~~~~~~i 247 (708)
.+++||..+......... .....++.+.+ ++. +++++.||.|++||..++.....+ .+|...|
T Consensus 186 ~i~~~d~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v 257 (388)
T d1erja_ 186 TVRIWDLRTGQCSLTLSI--------EDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSV 257 (388)
T ss_dssp EEEEEETTTTEEEEEEEC--------SSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCE
T ss_pred eeeeeecccccccccccc--------ccccccccccCCCCCeEEEEcCCCeEEEeecccCccceeeccccccccCCCCCE
Confidence 999999998887776653 33344555554 664 889999999999999998876654 3578899
Q ss_pred EEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEEEcCCCeEE
Q psy12614 248 LALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSGGLDSYLS 325 (708)
Q Consensus 248 ~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~~~d~~i~ 325 (708)
.+++|+|++++|++++.||.|++||+.......... .............|...|.+++|+ +.+|++|+.||.|+
T Consensus 258 ~~l~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~----~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~sg~~dg~i~ 333 (388)
T d1erja_ 258 YSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSK----TPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVL 333 (388)
T ss_dssp EEEEECTTSSEEEEEETTSEEEEEEC-------------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEE
T ss_pred EEEEECCCCCEEEEEECCCcEEEEeccCCccccccc----cccccceeeecccccceEEEEEECCCCCEEEEEeCCCEEE
Confidence 999999999999999999999999998711110000 001112345566778888888887 77888888888888
Q ss_pred EEeCCCCceeecCccCCCCceEEEEcCCcEEEEEcCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCc
Q psy12614 326 LSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNAT 405 (708)
Q Consensus 326 iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (708)
+||+.++. ......+|.+.
T Consensus 334 vwd~~~~~-------------------------------------------------------------~~~~l~~H~~~ 352 (388)
T d1erja_ 334 FWDKKSGN-------------------------------------------------------------PLLMLQGHRNS 352 (388)
T ss_dssp EEETTTCC-------------------------------------------------------------EEEEEECCSSC
T ss_pred EEECCCCc-------------------------------------------------------------EEEEEeCCCCC
Confidence 88775432 22333467778
Q ss_pred eEEEE------eCCCCcEEEEE-cCCceEEEEEEe
Q psy12614 406 IRCSV------VSNDGKYVAYS-TESCVRLHSLDL 433 (708)
Q Consensus 406 i~~~~------~s~~g~~l~~~-~d~~i~i~~~~~ 433 (708)
|.+++ |+|++.+|+++ .||+|+||+++.
T Consensus 353 V~~~~~~~~~~~spd~~~l~s~s~Dg~I~iW~~~k 387 (388)
T d1erja_ 353 VISVAVANGSSLGPEYNVFATGSGDCKARIWKYKK 387 (388)
T ss_dssp EEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEEE
T ss_pred EEEEEEecCcccCCCCCEEEEEeCCCEEEEEeeee
Confidence 88776 57899999985 599999999863
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=9.7e-35 Score=290.40 Aligned_cols=316 Identities=14% Similarity=0.222 Sum_probs=248.9
Q ss_pred eeeccCCCCcE-EEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe-CCEEEEEcCCCcEEEE
Q psy12614 19 IKFYAPEPKVI-NCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF-NDRLFSGGLQGFVNEY 96 (708)
Q Consensus 19 ~~~~~~h~~~v-~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~-~~~l~s~~~d~~i~vw 96 (708)
...++||.+.| +|++| ++++||+|+.||+|+|||+.+++.+. .+.+|. ++|.+++|+ +++|++++.|++|++|
T Consensus 5 ~~tL~GH~~~vitc~~~--~~~~l~tgs~Dg~i~vWd~~~~~~~~-~l~~H~--~~V~~l~~s~~~~l~s~s~D~~i~iw 79 (355)
T d1nexb2 5 RTTLRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSINKKFLL-QLSGHD--GGVWALKYAHGGILVSGSTDRTVRVW 79 (355)
T ss_dssp EEEEECCSSSCEEEEEE--ETTEEEEEETTTEEEEEETTTTEEEE-EEECCS--SCEEEEEEETTTEEEEEETTCCEEEE
T ss_pred cEEECCcCCCcEEEEEE--CCCEEEEEeCCCeEEEEECCCCcEEE-EEECCC--CCEEEEEEcCCCEEEEEecccccccc
Confidence 44688998875 66665 57899999999999999999998876 899999 999999999 8999999999999999
Q ss_pred ECCCCeEeEEEeecC--CceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEE---------------------Eeccc
Q psy12614 97 DMRRLNIKSSTAVTS--GTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYE---------------------KLLDR 153 (708)
Q Consensus 97 d~~~~~~~~~~~~~~--~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~---------------------~~~~~ 153 (708)
++...+.......+. .......+++++.++++++.|+.|++||+.+...... .....
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (355)
T d1nexb2 80 DIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRG 159 (355)
T ss_dssp ETTTTEEEEEECCCSSCEEEEEEEEETTEEEEEEEETTSEEEEEECCC-----------CCCEEESCTTTCTTEEEEEEC
T ss_pred cccccccccccccccccccccccccccccceeeeecCCCcEEEEEccCCceeccccccceeccceeccccccceeeeeee
Confidence 999998877666443 3455677889999999999999999999987653211 11112
Q ss_pred ccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeC
Q psy12614 154 QQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDG 231 (708)
Q Consensus 154 ~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~ 231 (708)
|...+. .+.+++++++++..| .|++||+.+++.+...... ...+.++.|+|++. +++++.|+.|++||.
T Consensus 160 ~~~~v~--~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~d~~i~i~d~ 230 (355)
T d1nexb2 160 HMASVR--TVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGH-------TDRIYSTIYDHERKRCISASMDTTIRIWDL 230 (355)
T ss_dssp CSSCEE--EEEEETTEEEEEETTSCEEEEETTTTEEEEEECCC-------SSCEEEEEEETTTTEEEEEETTSCEEEEET
T ss_pred cccccc--ccccccceeeeecccceeeeeecccccceeeeecc-------ccccccccccccceeeecccccceEEeeec
Confidence 223333 345678899999999 9999999999888776533 67789999999884 889999999999999
Q ss_pred CCCeeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe
Q psy12614 232 KTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH 311 (708)
Q Consensus 232 ~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~ 311 (708)
+++..+..+.+|...|.++++++ ++|++++.||.|++||+.+ +. ..+..|...+.++.+.
T Consensus 231 ~~~~~~~~~~~h~~~v~~~~~~~--~~l~~~~~dg~i~iwd~~~--------~~----------~~~~~~~~~~~~~~~~ 290 (355)
T d1nexb2 231 ENGELMYTLQGHTALVGLLRLSD--KFLVSAAADGSIRGWDAND--------YS----------RKFSYHHTNLSAITTF 290 (355)
T ss_dssp TTCCEEEEECCCSSCCCEEEECS--SEEEEECTTSEEEEEETTT--------CC----------EEEEEECTTCCCCCEE
T ss_pred ccccccccccccccccccccccc--ceeeeeecccccccccccc--------cc----------eecccccCCceEEEEE
Confidence 99999999999999999999875 6899999999999999988 43 4456677777766543
Q ss_pred --CCEEEEEcCCCeEEEEeCCCCcee-e-cCccCCCCceEEEEcCCcEEEE-EcCCeEEEEEe
Q psy12614 312 --GNRLYSGGLDSYLSLSYYPPKTLV-K-YPCTLAQSTPVSLAKDIQHVLL-QYTSHLELWSL 369 (708)
Q Consensus 312 --~~~l~s~~~d~~i~iw~~~~~~~~-~-~~~~~~~~~~~~~s~~~~~l~~-~~~~~i~i~~~ 369 (708)
++.+++++.|+.|++||++++++. . +..+.....+++++|+. ++++ +.|+.+.||.+
T Consensus 291 ~~~~~~l~~g~d~~i~vwd~~tg~~~~~~~~~~~~~V~~v~~~~~~-~~~~~s~dg~~~l~~~ 352 (355)
T d1nexb2 291 YVSDNILVSGSENQFNIYNLRSGKLVHANILKDADQIWSVNFKGKT-LVAAVEKDGQSFLEIL 352 (355)
T ss_dssp EECSSEEEEEETTEEEEEETTTCCBCCSCTTTTCSEEEEEEEETTE-EEEEEESSSCEEEEEE
T ss_pred cCCCCEEEEEeCCEEEEEECCCCCEEEEEecCCCCCEEEEEEcCCe-EEEEEECCCcEEEEEE
Confidence 455555567999999999987643 2 33344456778898874 4444 67888666654
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=100.00 E-value=6.3e-35 Score=284.27 Aligned_cols=288 Identities=15% Similarity=0.127 Sum_probs=223.6
Q ss_pred CeeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEE-eccccceEEEEEe-
Q psy12614 234 GVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNR-VIHEGDVKSLALH- 311 (708)
Q Consensus 234 ~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~v~~l~~~- 311 (708)
|+..+.+.||...|++++|+|++++|++|+.||.|++||+.+ ++ ....+ ..|...|.+++|+
T Consensus 2 g~~~~~~~GH~~~V~~l~~s~dg~~l~s~s~Dg~v~vWd~~~--------~~--------~~~~~~~~h~~~v~~v~~~~ 65 (299)
T d1nr0a2 2 GSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDIST--------GI--------SNRVFPDVHATMITGIKTTS 65 (299)
T ss_dssp TEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT--------CC--------EEECSSCSCSSCEEEEEECT
T ss_pred CccceEcCCCCCCcEEEEECCCCCEEEEEcCCCeEEEEECCC--------Cc--------EEEEEcCCCCCcEEEEEeec
Confidence 677889999999999999999999999999999999999998 65 34444 4688899999998
Q ss_pred CCEEEEEcCCCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEEEcCCeEEEEEecCCCCCCCCCCCCCCcccCCCC
Q psy12614 312 GNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSF 391 (708)
Q Consensus 312 ~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (708)
...+++++.|+.+++|+..........
T Consensus 66 ~g~~~~~~~d~~v~~~~~~~~~~~~~~----------------------------------------------------- 92 (299)
T d1nr0a2 66 KGDLFTVSWDDHLKVVPAGGSGVDSSK----------------------------------------------------- 92 (299)
T ss_dssp TSCEEEEETTTEEEEECSSSSSSCTTS-----------------------------------------------------
T ss_pred cceeecccceeeEEEeccCCccccccc-----------------------------------------------------
Confidence 556777788999999987543321111
Q ss_pred ceEEEEEEecCCCceEEEEeCCCCcEEEEEcCCceEEEEEEecCCcceeEEeecCCcccccceeEEEEEecCCCeEEEEe
Q psy12614 392 PRLIVKMSAVNNATIRCSVVSNDGKYVAYSTESCVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVLISADSTLLLAVS 471 (708)
Q Consensus 392 ~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~~~~ 471 (708)
.....+...+.+++++|+|++++++.++.+++|+... ... ... ...+++++|+|++++|++++
T Consensus 93 -----~~~~~~~~~~~~~~~s~~g~~~~~~~~~~i~~~~~~~------~~~---~~~---~~~~~~~~~s~~~~~l~~g~ 155 (299)
T d1nr0a2 93 -----AVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGK------LTE---VPI---SYNSSCVALSNDKQFVAVGG 155 (299)
T ss_dssp -----CCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTE------EEE---EEC---SSCEEEEEECTTSCEEEEEE
T ss_pred -----ccccccccccccccccccccccccccccccccccccc------ccc---ccc---cccccccccccccccccccc
Confidence 0112345677889999999999888888999998432 111 111 22456699999999999999
Q ss_pred cCCc--EEEecCCCeEEEEEecCCCCCccCcceEEEEECCCCcEEEEEecCCeEEEEECCce-----eeecCCCCCCceE
Q psy12614 472 LNGP--LYIIDLSSLEIKYCVDPYKSNLMSDVISLVQMSECKQYIVCADRKSHVVIWKNGQH-----HASLPRYRKPSTA 544 (708)
Q Consensus 472 ~dg~--i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~-----~~~~~~~~~~v~~ 544 (708)
.++. +|++..+....+.... | ...|++++|+|++++|++++.|+.|++||+.+. ...+.+|...|++
T Consensus 156 ~dg~i~~~d~~~~~~~~~~~~~----~--~~~i~~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~h~~~v~~ 229 (299)
T d1nr0a2 156 QDSKVHVYKLSGASVSEVKTIV----H--PAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVAC 229 (299)
T ss_dssp TTSEEEEEEEETTEEEEEEEEE----C--SSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCCCCCCCCSSCEEE
T ss_pred cccccccccccccccccccccc----c--ccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 9999 8998877443333332 3 678999999999999999999999999999832 2266789999999
Q ss_pred EEEcCCCCEEEEEecCCcEEEEEcCCCCCCchhhhhhccCchhhhcCCCCeeEEEeCCCCCceEEEEcCeeEEEEecC
Q psy12614 545 MAIHPTLSTLVTVYSDHRIVEFDLNRKAFTTFSRKLETNHPNEWLSRQLPVLGIEFDPQDSSLIYLMDDSALCVINKN 622 (708)
Q Consensus 545 l~~s~d~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~~~~l~~~~~d~~i~~wd~~ 622 (708)
++|+|++++|++++.||.|++||++++.... .......+...|..+. ++++++|++++.|+.|++||+.
T Consensus 230 l~~s~~~~~l~sgs~dg~i~iwd~~~~~~~~--------~~~~~~~~~~~v~~~~-~~~~~~l~s~s~D~~i~iWdl~ 298 (299)
T d1nr0a2 230 VSWSPDNVRLATGSLDNSVIVWNMNKPSDHP--------IIIKGAHAMSSVNSVI-WLNETTIVSAGQDSNIKFWNVP 298 (299)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETTCTTSCC--------EEETTSSTTSCEEEEE-EEETTEEEEEETTSCEEEEECC
T ss_pred ccccccccceEEEcCCCEEEEEECCCCCcce--------EEEecCCCCCcEEEEE-ECCCCEEEEEeCCCEEEEEecc
Confidence 9999999999999999999999999876441 1111122444566665 4667899999999999999984
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=1.2e-34 Score=291.08 Aligned_cols=241 Identities=10% Similarity=0.102 Sum_probs=207.9
Q ss_pred CcEEEEEEe--CCEEEEEcCCCcEEEEECCCCe--EeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEE
Q psy12614 72 NSIECLTWF--NDRLFSGGLQGFVNEYDMRRLN--IKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLY 147 (708)
Q Consensus 72 ~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~~--~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~ 147 (708)
.+|+|++|+ +++||+++.||.|++||+++++ ++..+.+|.++|.+++|+|++++|++++.|+.|++||+.++....
T Consensus 8 ~pIt~~~~s~dg~~la~~~~~~~i~iw~~~~~~~~~~~~l~gH~~~V~~l~fsp~~~~l~s~s~D~~i~vWd~~~~~~~~ 87 (371)
T d1k8kc_ 8 EPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKP 87 (371)
T ss_dssp SCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEE
T ss_pred CCeEEEEECCCCCEEEEEeCCCEEEEEECCCCCEEEEEEecCCCCCEEEEEECCCCCEEEEEECCCeEEEEeeccccccc
Confidence 789999999 8999999999999999998875 667788999999999999999999999999999999999888765
Q ss_pred EEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCc
Q psy12614 148 EKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGF 225 (708)
Q Consensus 148 ~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~ 225 (708)
...+.+|...|.+++|+|++++|++++.+ .+++|++.............. .+...|.+++|+|+++ +++|+.||.
T Consensus 88 ~~~~~~~~~~v~~i~~~p~~~~l~~~s~d~~i~i~~~~~~~~~~~~~~~~~---~~~~~v~~v~~~p~~~~l~s~s~D~~ 164 (371)
T d1k8kc_ 88 TLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKK---PIRSTVLSLDWHPNSVLLAAGSCDFK 164 (371)
T ss_dssp EEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECT---TCCSCEEEEEECTTSSEEEEEETTSC
T ss_pred ccccccccccccccccccccccceeecccCcceeeeeeccccccccccccc---ccccccccccccccccceeccccCcE
Confidence 56778899999999999999999999999 999999987765544433322 3478899999999995 889999999
Q ss_pred EEEEeCCCC------------------eeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCC
Q psy12614 226 VRFWDGKTG------------------VQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQ 287 (708)
Q Consensus 226 i~~wd~~~~------------------~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~ 287 (708)
|++|+.... +.+.....|...|.+++|+|++++|++++.|+.|++||+.. ++
T Consensus 165 v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~--------~~-- 234 (371)
T d1k8kc_ 165 CRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADK--------KM-- 234 (371)
T ss_dssp EEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGG--------TT--
T ss_pred EEEEeeccCccccccccccccccccceeeeeeccCccCcEEEEEeecccccccccccCCcceEEeeec--------cc--
Confidence 999997542 34566678899999999999999999999999999999998 66
Q ss_pred CCcceEEeEEEeccccceEEEEEe-CCEEEEEcCCCeEEEEeCCC
Q psy12614 288 GSSVWVRSVNRVIHEGDVKSLALH-GNRLYSGGLDSYLSLSYYPP 331 (708)
Q Consensus 288 ~~~~~~~~~~~~~~~~~v~~l~~~-~~~l~s~~~d~~i~iw~~~~ 331 (708)
....+..|..+|.+++|+ .+.+++++.|+.+++|....
T Consensus 235 ------~~~~~~~~~~~v~s~~fs~d~~~la~g~d~~~~~~~~~~ 273 (371)
T d1k8kc_ 235 ------AVATLASETLPLLAVTFITESSLVAAGHDCFPVLFTYDS 273 (371)
T ss_dssp ------EEEEEECSSCCEEEEEEEETTEEEEEETTSSCEEEEEET
T ss_pred ------ceeeeecccccceeeeecCCCCEEEEEcCCceEEEEeeC
Confidence 677888999999999999 55555566688777766544
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.3e-32 Score=273.20 Aligned_cols=326 Identities=17% Similarity=0.297 Sum_probs=259.7
Q ss_pred EeCCCCCeEEEEEecCCCCCcE-EEEEEeCCEEEEEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeC
Q psy12614 53 WDISETPHVDRVFIGDPLSNSI-ECLTWFNDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTE 131 (708)
Q Consensus 53 wd~~~~~~~~~~~~~h~~~~~v-~~l~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~ 131 (708)
|+..+.+... ++.||. +.| .+++|+|++||||+.||+|++||+.+++++.++.+|.+.|.+++|+|+ +|++++.
T Consensus 1 W~~~~~~~~~-~l~GH~--~~V~s~~~~~g~~l~sgs~Dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~~~~--~l~s~s~ 75 (342)
T d2ovrb2 1 WRRGELKSPK-VLKGHD--DHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN--IIISGST 75 (342)
T ss_dssp HHHSCCCCCE-EEECST--TSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEETT--EEEEEET
T ss_pred CCCCCCCcCE-EECCcC--CceEEEEEECCCEEEEEeCCCeEEEEECCCCCEEEEEeCCCCCEEEEEeCCC--cccccee
Confidence 4555555554 899999 776 567777999999999999999999999999999999999999999975 8999999
Q ss_pred CCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEE
Q psy12614 132 QGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVA 210 (708)
Q Consensus 132 d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 210 (708)
|+.+++|+....... .....+...+...... ...++.+..+ .+.+|+..+++....+... .... ...
T Consensus 76 D~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~--~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~-------~~~~-~~~ 143 (342)
T d2ovrb2 76 DRTLKVWNAETGECI--HTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGH-------VAAV-RCV 143 (342)
T ss_dssp TSCEEEEETTTTEEE--EEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCCEEEEEECC-------SSCE-EEE
T ss_pred cccccccccccccce--ecccccceeEeeeecc--cccccccccceeEEEeecccccceeeeecc-------cccc-eee
Confidence 999999999988776 3444455556655544 4567788888 9999999999887777643 2222 222
Q ss_pred EccCCEEEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCc
Q psy12614 211 FCADFTIITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSS 290 (708)
Q Consensus 211 ~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~ 290 (708)
......+++++.++.|++||....+.+..+.+|...+..+. +++.++++++.||.|++||+.. ++
T Consensus 144 ~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~--~~~~~l~s~~~dg~i~~~d~~~--------~~----- 208 (342)
T d2ovrb2 144 QYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQ--FDGIHVVSGSLDTSIRVWDVET--------GN----- 208 (342)
T ss_dssp EECSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEE--ECSSEEEEEETTSCEEEEETTT--------CC-----
T ss_pred ccccceeeeecCCCeEEEeecccceeeEEEcCccccccccc--CCCCEEEEEeCCCeEEEeeccc--------ce-----
Confidence 33344688999999999999999999999988877766554 5778999999999999999998 66
Q ss_pred ceEEeEEEeccccceEEEEEeCCEEEEEcCCCeEEEEeCCCCcee-ecCccCC-CCceEEEEcCCcEEEE-EcCCeEEEE
Q psy12614 291 VWVRSVNRVIHEGDVKSLALHGNRLYSGGLDSYLSLSYYPPKTLV-KYPCTLA-QSTPVSLAKDIQHVLL-QYTSHLELW 367 (708)
Q Consensus 291 ~~~~~~~~~~~~~~v~~l~~~~~~l~s~~~d~~i~iw~~~~~~~~-~~~~~~~-~~~~~~~s~~~~~l~~-~~~~~i~i~ 367 (708)
....+..|...+.++++++++|++++.|+.|++|++...... .+..+.. .....+++++++++++ +.|+.|++|
T Consensus 209 ---~~~~~~~~~~~v~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~s~Dg~i~iw 285 (342)
T d2ovrb2 209 ---CIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLW 285 (342)
T ss_dssp ---EEEEECCCCSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEECSSEEEEEETTSEEEEE
T ss_pred ---eeeEecccccceeEEecCCCEEEEEcCCCEEEEEecccccccccccccceeeeceeecccCCCeeEEEcCCCEEEEE
Confidence 677888999999999999999999999999999999887633 3332222 3345667777888877 488999999
Q ss_pred EecCCCCCCCCCCCCCCcccCCCCceEEEEEEe----cCCCceEEEEeCCCCcEEEEEc-CCc----eEEEEEEe
Q psy12614 368 SLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSA----VNNATIRCSVVSNDGKYVAYST-ESC----VRLHSLDL 433 (708)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~i~~~~~s~~g~~l~~~~-d~~----i~i~~~~~ 433 (708)
|+.+++ .+..+.. ++...|.+++|+|++.++|+|. ||+ |++||++.
T Consensus 286 d~~tg~--------------------~i~~~~~~~~~~~~~~v~~v~~s~~~~~la~g~~dGt~~~~l~~~Df~~ 340 (342)
T d2ovrb2 286 DLKTGE--------------------FIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDV 340 (342)
T ss_dssp ETTTCC--------------------EEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECCC
T ss_pred ECCCCC--------------------EEEEEecccCCCCCCCEEEEEECCCCCEEEEEeCCCCCeeEEEEEeCCC
Confidence 999876 4444432 4667899999999999999865 764 89999864
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=9.6e-33 Score=274.13 Aligned_cols=285 Identities=17% Similarity=0.232 Sum_probs=235.8
Q ss_pred EEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEE
Q psy12614 61 VDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLF 138 (708)
Q Consensus 61 ~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iw 138 (708)
..++|.||. ++|++|+|+ +++|++|+.||+|++||+.+++.+..+..|...|.+++|+|+++++++|+.|+.+++|
T Consensus 47 ~~~tL~GH~--~~I~~l~~s~~~~~l~sgs~Dg~v~iWd~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~d~~i~~~ 124 (340)
T d1tbga_ 47 TRRTLRGHL--AKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIY 124 (340)
T ss_dssp EEEEECCCS--SCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEEECSCSCEEEEEECTTSSEEEEEETTCCEEEE
T ss_pred eeEEECCCC--CCEEEEEECCCCCEEEEEECCCceeeeecccceeEEEEecccccEEeeEeeccceeeeeecccceeecc
Confidence 445899999 999999999 8999999999999999999999999999999999999999999999999999999999
Q ss_pred EccCCcE--EEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCC
Q psy12614 139 QISDEGL--LYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADF 215 (708)
Q Consensus 139 d~~~~~~--~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 215 (708)
+...... .....+.+|........... +..+.....+ ....+.............. ...+....+.+.+
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~ 196 (340)
T d1tbga_ 125 NLKTREGNVRVSRELAGHTGYLSCCRFLD-DNQIVTSSGDTTCALWDIETGQQTTTFTGH-------TGDVMSLSLAPDT 196 (340)
T ss_dssp ESSSSCSCCCEEEEECCCSSCEEEEEEEE-TTEEEEEETTTEEEEEETTTTEEEEEEECC-------SSCEEEEEECTTS
T ss_pred cccccccccccceeccccccccccccccc-cccccccccccccccccccccccccccccc-------ceeEeeecccccc
Confidence 9875432 22256677777666665554 4566666777 8888888777666655533 6778888888887
Q ss_pred E-EEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEE
Q psy12614 216 T-IITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVR 294 (708)
Q Consensus 216 ~-l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~ 294 (708)
. +++++.|+.|++||+++++.+..+.+|...|.+++|+|++++|++++.||.|++|++.. .+ ...
T Consensus 197 ~~~~~~~~d~~v~i~d~~~~~~~~~~~~h~~~i~~v~~~p~~~~l~s~s~d~~i~~~~~~~--------~~------~~~ 262 (340)
T d1tbga_ 197 RLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRA--------DQ------ELM 262 (340)
T ss_dssp SEEEEEETTTEEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT--------TE------EEE
T ss_pred ceeEEeecCceEEEEECCCCcEEEEEeCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeecc--------cc------ccc
Confidence 5 88999999999999999999999999999999999999999999999999999999987 42 112
Q ss_pred eEEEeccccceEEEEEe--CCEEEEEcCCCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEEEcCCeEEEEEecCC
Q psy12614 295 SVNRVIHEGDVKSLALH--GNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSLGSA 372 (708)
Q Consensus 295 ~~~~~~~~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~ 372 (708)
......+...|.+++|+ +.+|++|+.||.|++||+.+..
T Consensus 263 ~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~i~iwd~~~~~--------------------------------------- 303 (340)
T d1tbga_ 263 TYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKAD--------------------------------------- 303 (340)
T ss_dssp EECCTTCCSCEEEEEECSSSCEEEEEETTSCEEEEETTTCC---------------------------------------
T ss_pred ccccccccCceEEEEECCCCCEEEEEECCCEEEEEECCCCc---------------------------------------
Confidence 22234556678888888 7888888888888888875432
Q ss_pred CCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEEE-cCCceEEEE
Q psy12614 373 QSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYS-TESCVRLHS 430 (708)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~-~d~~i~i~~ 430 (708)
......+|...|.+++|+|++++|+++ .||.|+|||
T Consensus 304 ----------------------~~~~~~~H~~~V~~l~~s~d~~~l~s~s~Dg~v~iWd 340 (340)
T d1tbga_ 304 ----------------------RAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp ----------------------EEEEECCCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred ----------------------EEEEEcCCCCCEEEEEEeCCCCEEEEEccCCEEEEeC
Confidence 233344688899999999999999985 599999996
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.3e-32 Score=270.24 Aligned_cols=319 Identities=14% Similarity=0.234 Sum_probs=256.3
Q ss_pred eeeeeeccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEeCCEEEEEcCCCcEEE
Q psy12614 16 VHNIKFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWFNDRLFSGGLQGFVNE 95 (708)
Q Consensus 16 ~~~~~~~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~~~~l~s~~~d~~i~v 95 (708)
++..++++||.+.|.+ +++++|++||+|+.||+|+|||+.+++.+. .+.+|. ..|.+++|++++|++++.|+++++
T Consensus 6 ~~~~~~l~GH~~~V~s-~~~~~g~~l~sgs~Dg~i~vWd~~~~~~~~-~~~~h~--~~V~~v~~~~~~l~s~s~D~~~~~ 81 (342)
T d2ovrb2 6 LKSPKVLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCLR-TLVGHT--GGVWSSQMRDNIIISGSTDRTLKV 81 (342)
T ss_dssp CCCCEEEECSTTSCEE-EEEEETTEEEEEETTSCEEEEETTTCCEEE-ECCCCS--SCEEEEEEETTEEEEEETTSCEEE
T ss_pred CCcCEEECCcCCceEE-EEEECCCEEEEEeCCCeEEEEECCCCCEEE-EEeCCC--CCEEEEEeCCCccccceecccccc
Confidence 3455688999999865 467789999999999999999999999886 899999 999999999889999999999999
Q ss_pred EECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecC
Q psy12614 96 YDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCA 175 (708)
Q Consensus 96 wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~ 175 (708)
|+............+...+......+ ..++.+..|+.+.+|+..+++.. ..+..+..... .+.+....+++++.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~d~~i~~~~~~~~~~~--~~~~~~~~~~~--~~~~~~~~~~~~~~ 155 (342)
T d2ovrb2 82 WNAETGECIHTLYGHTSTVRCMHLHE--KRVVSGSRDATLRVWDIETGQCL--HVLMGHVAAVR--CVQYDGRRVVSGAY 155 (342)
T ss_dssp EETTTTEEEEEECCCSSCEEEEEEET--TEEEEEETTSEEEEEESSSCCEE--EEEECCSSCEE--EEEECSSCEEEEET
T ss_pred cccccccceecccccceeEeeeeccc--ccccccccceeEEEeecccccce--eeeecccccce--eeccccceeeeecC
Confidence 99999888877777777776655544 56788899999999999998876 33433333333 33445667888888
Q ss_pred C-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCC-EEEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEe
Q psy12614 176 A-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADF-TIITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVS 253 (708)
Q Consensus 176 d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s 253 (708)
+ .|++||....+.+..+... ...+..+.+ ++ .+++++.||.|++||++.++.+..+.+|...+.+++++
T Consensus 156 d~~i~~~d~~~~~~~~~~~~~-------~~~~~~~~~--~~~~l~s~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~ 226 (342)
T d2ovrb2 156 DFMVKVWDPETETCLHTLQGH-------TNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELK 226 (342)
T ss_dssp TSCEEEEEGGGTEEEEEECCC-------SSCEEEEEE--CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEEE
T ss_pred CCeEEEeecccceeeEEEcCc-------ccccccccC--CCCEEEEEeCCCeEEEeecccceeeeEecccccceeEEecC
Confidence 8 9999999988888776532 455555544 55 59999999999999999999999999999999888876
Q ss_pred CCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEe---ccccceEEEEEeCCEEEEEcCCCeEEEEeCC
Q psy12614 254 EDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRV---IHEGDVKSLALHGNRLYSGGLDSYLSLSYYP 330 (708)
Q Consensus 254 ~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~---~~~~~v~~l~~~~~~l~s~~~d~~i~iw~~~ 330 (708)
+ ++|++++.|+.|++|+... .+ ....+. .|...+.++.++++++++++.||.|++||++
T Consensus 227 ~--~~l~s~s~d~~i~iwd~~~--------~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~s~s~Dg~i~iwd~~ 288 (342)
T d2ovrb2 227 D--NILVSGNADSTVKIWDIKT--------GQ--------CLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLK 288 (342)
T ss_dssp T--TEEEEEETTSCEEEEETTT--------CC--------EEEEECSTTSCSSCEEEEEECSSEEEEEETTSEEEEEETT
T ss_pred C--CEEEEEcCCCEEEEEeccc--------cc--------ccccccccceeeeceeecccCCCeeEEEcCCCEEEEEECC
Confidence 5 5999999999999999987 44 233333 4567788888889999999999999999998
Q ss_pred CCce-eecC-----ccCCCCceEEEEcCCcEEEEE-cCC----eEEEEEecC
Q psy12614 331 PKTL-VKYP-----CTLAQSTPVSLAKDIQHVLLQ-YTS----HLELWSLGS 371 (708)
Q Consensus 331 ~~~~-~~~~-----~~~~~~~~~~~s~~~~~l~~~-~~~----~i~i~~~~~ 371 (708)
++.+ +.+. .+......++++|++.+++++ .+| .|.+||+..
T Consensus 289 tg~~i~~~~~~~~~~~~~~v~~v~~s~~~~~la~g~~dGt~~~~l~~~Df~~ 340 (342)
T d2ovrb2 289 TGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDV 340 (342)
T ss_dssp TCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECCC
T ss_pred CCCEEEEEecccCCCCCCCEEEEEECCCCCEEEEEeCCCCCeeEEEEEeCCC
Confidence 8763 3332 122345689999999999986 444 599999864
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=1.4e-32 Score=270.17 Aligned_cols=279 Identities=16% Similarity=0.134 Sum_probs=226.9
Q ss_pred cEEEEEEcCCCCEEEEEeCCC-cEEEEeCCCCC-eEEEEEecCCCCCcEEEEEEe----CCEEEEEcCCCcEEEEECCCC
Q psy12614 28 VINCIACEPKSSRLAVSRADQ-SIEIWDISETP-HVDRVFIGDPLSNSIECLTWF----NDRLFSGGLQGFVNEYDMRRL 101 (708)
Q Consensus 28 ~v~~~~~s~~~~~la~~~~dg-~v~iwd~~~~~-~~~~~~~~h~~~~~v~~l~~~----~~~l~s~~~d~~i~vwd~~~~ 101 (708)
.+++++|+|+++.||+++.+. .|+.||..... .....+.+|. ...|++++|+ +.+|++|+.||+|++||+..+
T Consensus 19 ~~t~l~~~~~~~~la~~~~~~~~i~~~~~~~~~~~~~~~~~gh~-~~~v~~v~fsP~~~g~~lasgs~Dg~i~iWd~~~~ 97 (325)
T d1pgua1 19 FTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHG-SSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFD 97 (325)
T ss_dssp CCCCCEEETTTTEEEEEETTEEEEEECCSSCCSSCSEEEECTTT-TSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEE
T ss_pred CeEEEEECCCCCEEEEEeCCCEEEEEEeCCCCCccceEEEeCCC-CCCEEEEEEeeCCCCCEEEEEeCCCCEEEeeecCC
Confidence 568999999999999987553 24556654432 2223778886 4689999997 679999999999999998765
Q ss_pred eE--------eEEEeecCCceEEEEEecCCCEEEEEeC--CCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCE-E
Q psy12614 102 NI--------KSSTAVTSGTCWCLSVHKKKRLLAAGTE--QGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDY-L 170 (708)
Q Consensus 102 ~~--------~~~~~~~~~~v~~~~~s~~~~~la~~~~--d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~-l 170 (708)
+. ...+..|.++|.+++|++++++|++++. ++.+.+|++++++.. ..+.+|...|.+++|+|++++ +
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~--~~~~~h~~~v~~~~~~~~~~~~~ 175 (325)
T d1pgua1 98 KESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSGNSL--GEVSGHSQRINACHLKQSRPMRS 175 (325)
T ss_dssp GGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETTTCCEE--EECCSCSSCEEEEEECSSSSCEE
T ss_pred cceeeeecccccccccccCcEEEEEECCCCCccceeeccccceEEEEeecccccc--eeeeecccccccccccccccceE
Confidence 42 2334568899999999999999988764 678999999999877 778899999999999999875 6
Q ss_pred EEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCC-E-EEEEcCCCcEEEEeCCCCeeEEEeeccccCe
Q psy12614 171 VTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADF-T-IITGDSGGFVRFWDGKTGVQWSDVKTHKKDI 247 (708)
Q Consensus 171 ~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~-l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i 247 (708)
++++.| .+++||...++......... .+...|.+++|+|++ . +++++.||.|++||+++++.+..+.+|...+
T Consensus 176 ~~~~~d~~v~~~d~~~~~~~~~~~~~~----~~~~~v~~v~~~pd~~~~l~s~~~d~~i~iwd~~~~~~~~~l~~~~~~v 251 (325)
T d1pgua1 176 MTVGDDGSVVFYQGPPFKFSASDRTHH----KQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPV 251 (325)
T ss_dssp EEEETTTEEEEEETTTBEEEEEECSSS----CTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCC
T ss_pred EEeecccccccccccccccceeccccc----CCCCccEEeeeccccceeccccccccceeeeeecccccccccccccccc
Confidence 778888 99999998888777665543 457889999999975 4 8889999999999999999999999998888
Q ss_pred EEEEEe---CCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccc--eE--EEEEe-CCEEEEEc
Q psy12614 248 LALTVS---EDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGD--VK--SLALH-GNRLYSGG 319 (708)
Q Consensus 248 ~~~~~s---~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--v~--~l~~~-~~~l~s~~ 319 (708)
..+.|+ |++++|++++.|+.|++||+.+ ++ .+..+..|... +. ++.+. +..|++++
T Consensus 252 ~~~~~s~~~~dg~~l~s~s~D~~i~iwd~~~--------~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s 315 (325)
T d1pgua1 252 QGGIFALSWLDSQKFATVGADATIRVWDVTT--------SK--------CVQKWTLDKQQLGNQQVGVVATGNGRIISLS 315 (325)
T ss_dssp CSCEEEEEESSSSEEEEEETTSEEEEEETTT--------TE--------EEEEEECCTTCGGGCEEEEEEEETTEEEEEE
T ss_pred ccceeeeeccCCCEEEEEeCCCeEEEEECCC--------CC--------EEEEEEecCCcccCeEEEEEECCCCEEEEEE
Confidence 777666 7899999999999999999998 65 45555555443 33 34444 67999999
Q ss_pred CCCeEEEEeC
Q psy12614 320 LDSYLSLSYY 329 (708)
Q Consensus 320 ~d~~i~iw~~ 329 (708)
.||.|++||+
T Consensus 316 ~dg~i~vwdl 325 (325)
T d1pgua1 316 LDGTLNFYEL 325 (325)
T ss_dssp TTSCEEEEET
T ss_pred CCCEEEEEEC
Confidence 9999999986
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.9e-31 Score=253.92 Aligned_cols=288 Identities=14% Similarity=0.289 Sum_probs=238.2
Q ss_pred eeeeeeeccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEeCCEEEEEcCCCcEE
Q psy12614 15 GVHNIKFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWFNDRLFSGGLQGFVN 94 (708)
Q Consensus 15 ~~~~~~~~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~~~~l~s~~~d~~i~ 94 (708)
.++++..+.+|...|+|++| |+++||+|+.||+|+|||+.+++.+. .+.+|. ++|.+++|++++|++++.|+.|+
T Consensus 4 ~~~~i~~~~~~~~~V~c~~~--d~~~l~sgs~Dg~i~vWd~~~~~~~~-~l~~H~--~~V~~v~~~~~~l~s~s~D~~i~ 78 (293)
T d1p22a2 4 SLQRIHCRSETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKR-ILTGHT--GSVLCLQYDERVIITGSSDSTVR 78 (293)
T ss_dssp CCCCEECCCSSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEEE-EECCCS--SCEEEEECCSSEEEEEETTSCEE
T ss_pred eEEEEeccCCCCCCEEEEEE--cCCEEEEEeCCCeEEEEECCCCcEEE-EEecCC--CCEeeeecccceeeccccccccc
Confidence 45666778899999999765 79999999999999999999999886 899999 99999999999999999999999
Q ss_pred EEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcE-EEEEecccccccEEEEEECCCCCEEEEe
Q psy12614 95 EYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGL-LYEKLLDRQQGRILCTAWHSSGDYLVTG 173 (708)
Q Consensus 95 vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~-~~~~~~~~~~~~v~~~~~s~d~~~l~~~ 173 (708)
+|++..+........+.... ..+.+....++++..++.+.+|+...... .....+..|...+..+.+.+ ..++++
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~~~ 154 (293)
T d1p22a2 79 VWDVNTGEMLNTLIHHCEAV--LHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDD--KYIVSA 154 (293)
T ss_dssp EEESSSCCEEEEECCCCSCE--EEEECCTTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEET--TEEEEE
T ss_pred cccccccccccccccccccc--ccccccccceeecccccceeEeeccccccccccccccccccccccceecc--cccccc
Confidence 99999998877766554433 44566677899999999999999886543 22356677888888888764 568888
Q ss_pred cCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEE
Q psy12614 174 CAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTV 252 (708)
Q Consensus 174 ~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~ 252 (708)
+.| .|++||+.+++.+..+... ...+..+.++++ .+++++.||.|++||+++++.+....++...+.. +
T Consensus 155 s~d~~i~~~d~~~~~~~~~~~~~-------~~~v~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~--~ 224 (293)
T d1p22a2 155 SGDRTIKVWNTSTCEFVRTLNGH-------KRGIACLQYRDR-LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRC--I 224 (293)
T ss_dssp ETTSEEEEEETTTCCEEEEEECC-------SSCEEEEEEETT-EEEEEETTSCEEEEETTTCCEEEEECCCSSCEEE--E
T ss_pred cCCCceeeecCCCCcEEEEEccc-------ccccccccCCCC-eEEEecCCCEEEEEecccceeeeeecccceeeee--c
Confidence 889 9999999999998887643 667777777643 5999999999999999999999999988888765 5
Q ss_pred eCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEeCCEEEEEcCCCeEEEEe
Q psy12614 253 SEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALHGNRLYSGGLDSYLSLSY 328 (708)
Q Consensus 253 s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~s~~~d~~i~iw~ 328 (708)
++++.+|++++.||.|++||+........ .........+.+|.+.|.+++|++.+|++++.|++|++||
T Consensus 225 ~~~~~~l~sg~~dg~i~iwd~~~~~~~~~-------~~~~~~~~~~~~H~~~V~~v~~d~~~l~s~s~Dg~i~iWD 293 (293)
T d1p22a2 225 RFDNKRIVSGAYDGKIKVWDLVAALDPRA-------PAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTILIWD 293 (293)
T ss_dssp ECCSSEEEEEETTSCEEEEEHHHHTSTTS-------CTTTTEEEEECCCSSCCCCEEECSSCEEECCSSSEEEEEC
T ss_pred cccceEEEEEcCCCEEEEEECCCCccccc-------cCCceeeEEecCCCCCEEEEEEcCCEEEEEecCCEEEEeC
Confidence 67788999999999999999876111100 0112256778899999999999999999999999999997
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.98 E-value=2.8e-30 Score=261.22 Aligned_cols=281 Identities=12% Similarity=0.170 Sum_probs=214.4
Q ss_pred eeeeeeccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCe-----EEEEEecCCCCCcEEEEEEe---------C
Q psy12614 16 VHNIKFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPH-----VDRVFIGDPLSNSIECLTWF---------N 81 (708)
Q Consensus 16 ~~~~~~~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~-----~~~~~~~h~~~~~v~~l~~~---------~ 81 (708)
+......++|.+.|.++++++ ++|++|+.|++|+|||..+... .......|. ..+..+... +
T Consensus 4 ~~~~~~~~~H~~~I~~v~~~~--~~l~S~S~D~~iriWd~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 79 (393)
T d1sq9a_ 4 IATANAGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHK--SGLHHVDVLQAIERDAFEL 79 (393)
T ss_dssp EEEEEESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCT--TCEEEEEEEEEEETTTEEE
T ss_pred EeeeecCCcccCccEEEEEeC--CEEEEEECCCeEEEEECCCCCCCcccceeEeeeecc--CCceEeeeEeeeccCCCCC
Confidence 345677899999999999875 6899999999999999876431 112444555 555444433 3
Q ss_pred CEEEEEcCCCcEEEEECCCCeEeEEE----------eecCCceEEEEEecC-----CCEEEEEeCCCcEEEEEccCCc--
Q psy12614 82 DRLFSGGLQGFVNEYDMRRLNIKSST----------AVTSGTCWCLSVHKK-----KRLLAAGTEQGHINLFQISDEG-- 144 (708)
Q Consensus 82 ~~l~s~~~d~~i~vwd~~~~~~~~~~----------~~~~~~v~~~~~s~~-----~~~la~~~~d~~i~iwd~~~~~-- 144 (708)
..+++++.||.|++|++........+ ..+...++.+++.++ +.++++++.||.+++|++....
T Consensus 80 ~~~~s~~~dg~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~vw~~~~~~~~ 159 (393)
T d1sq9a_ 80 CLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADE 159 (393)
T ss_dssp EEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSH
T ss_pred cEEEEEeCCCcEEEEEccCCCceeeeeccccceeeeccCCCceEEEEEecCCCcccccEEEEEcCCCcEEEEEeecCCcc
Confidence 46789999999999997654321111 124456888888876 4678999999999999985321
Q ss_pred -----------EE---EEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEE
Q psy12614 145 -----------LL---YEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCV 209 (708)
Q Consensus 145 -----------~~---~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~ 209 (708)
.. .......+...+.+++|+|++ +|++|+.| .|++||+.+++.+..+....... +|...|.++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg-~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~l~-~h~~~V~~l 237 (393)
T d1sq9a_ 160 SNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMI-NNSNSIRSV 237 (393)
T ss_dssp HHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC----CCCCCEEEE
T ss_pred cceeeeeeccceecccceecccCCCCcEEEEEECCCC-EEEEEeCCCcEEEEeecccccccccccccccc-cccceEEEc
Confidence 00 112223455678999999998 89999999 99999999999988776543222 458899999
Q ss_pred EEccCCE-EEEEcCCC---cEEEEeCCCCeeEEEee-------------ccccCeEEEEEeCCCCEEEEEecCCeEEEEE
Q psy12614 210 AFCADFT-IITGDSGG---FVRFWDGKTGVQWSDVK-------------THKKDILALTVSEDENYLYCAGVDPTVVCFQ 272 (708)
Q Consensus 210 ~~~~~~~-l~~~~~dg---~i~~wd~~~~~~~~~~~-------------~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~ 272 (708)
+|+|||+ |++|+.|+ .|++||+++++.+..+. +|...|++++|+|++++|++++.|++|++||
T Consensus 238 ~~spdg~~l~sgs~D~t~~~i~lwd~~~g~~~~~l~~~~~~~~~~~~~~gH~~~V~~l~fspd~~~l~S~s~D~~v~vWd 317 (393)
T d1sq9a_ 238 KFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWD 317 (393)
T ss_dssp EECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEE
T ss_pred ccccccceeeeecCCCCcceeeecccccceeeeeeccccccccceeeeecccCceeeeccCCCCCeeEEECCCCEEEEEE
Confidence 9999995 88888876 49999999998877763 7999999999999999999999999999999
Q ss_pred ccCCcccccCCCCCCCCcceEEeEEEeccccceEE----EEEe--CCEEEEE
Q psy12614 273 RTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKS----LALH--GNRLYSG 318 (708)
Q Consensus 273 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~----l~~~--~~~l~s~ 318 (708)
+.+ |+ .+..+.+|...|.. +++. +..++++
T Consensus 318 ~~~--------g~--------~~~~l~gH~~~v~~~~~~~~~~~~~~~~~~~ 353 (393)
T d1sq9a_ 318 VKT--------KE--------RITTLNMHCDDIEIEEDILAVDEHGDSLAEP 353 (393)
T ss_dssp TTT--------TE--------EEEEEECCGGGCSSGGGCCCBCTTSCBCSSC
T ss_pred CCC--------CC--------EEEEECCcCCcccCCccEEEECCCCCEEEEc
Confidence 999 76 78889999988863 5565 5555544
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.98 E-value=1.4e-30 Score=251.58 Aligned_cols=267 Identities=15% Similarity=0.129 Sum_probs=217.9
Q ss_pred eeeeeccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe-CCEEEEEcCCCcEEE
Q psy12614 17 HNIKFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF-NDRLFSGGLQGFVNE 95 (708)
Q Consensus 17 ~~~~~~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~-~~~l~s~~~d~~i~v 95 (708)
+.++.+.||.++|++++|+| |++|+.||+|++||+.+ ...+|. ..|.+++++ +..+++++.|++|++
T Consensus 4 ~~i~~l~gH~~~I~~l~~s~----l~sgs~Dg~v~~Wd~~~------~~~~h~--~~V~~~~~~~~~~~~s~s~D~~v~~ 71 (287)
T d1pgua2 4 EVLKTISGHNKGITALTVNP----LISGSYDGRIMEWSSSS------MHQDHS--NLIVSLDNSKAQEYSSISWDDTLKV 71 (287)
T ss_dssp EEEEEECCCSSCEEEEETTT----TEEEETTSCEEETTTTE------EECCCC--SCEEEEECCSTTCCEEEETTTEEEE
T ss_pred ceeEEECCCCCceEEEEECc----EEEEeCCCeEEEEECCC------CCCCCC--CCEEEEEecCCCeEEEEeecccccc
Confidence 55778999999999999998 99999999999999875 346888 999999999 888999999999999
Q ss_pred EECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecC
Q psy12614 96 YDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCA 175 (708)
Q Consensus 96 wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~ 175 (708)
|++... .....+..+++++++..++++ .++.+.+|+..+++.. ..+.. ...+ .++++++..+++++.
T Consensus 72 w~~~~~-------~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~-~~~~--~~~~~~~~~~~v~~~ 138 (287)
T d1pgua2 72 NGITKH-------EFGSQPKVASANNDGFTAVLT-NDDDLLILQSFTGDII--KSVRL-NSPG--SAVSLSQNYVAVGLE 138 (287)
T ss_dssp TTEEEE-------ECSSCEEEEEECSSSEEEEEE-TTSEEEEEETTTCCEE--EEEEC-SSCE--EEEEECSSEEEEEET
T ss_pred cccccc-------ccccceeeeeeccCCceEEEe-ecccceeeeccceeee--eeccc-ccee--eeeeccCcceeeecc
Confidence 997542 234567888999998777664 5667899999988876 33332 2333 456677888888777
Q ss_pred C--eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCeeEE-EeeccccCeEEEE
Q psy12614 176 A--AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWS-DVKTHKKDILALT 251 (708)
Q Consensus 176 d--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~-~~~~~~~~i~~~~ 251 (708)
+ .+++|++...+....+.. .+...+++++|+|++. +++|+.||.|++||+.+++... .+.+|...|.+++
T Consensus 139 ~~~~v~~~~~~~~~~~~~~~~------~~~~~v~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~ 212 (287)
T d1pgua2 139 EGNTIQVFKLSDLEVSFDLKT------PLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAIS 212 (287)
T ss_dssp TTSCEEEEETTEEEEEEECSS------CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSCCCSSCEEEEE
T ss_pred ccceeeeeeccccceeeeeee------ccCCceeEEEeccCccccccccccccccceeecccccccccccccccccceee
Confidence 6 799999876655544433 2367899999999995 8999999999999999988755 4678999999999
Q ss_pred EeCC----------CCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe-CCEEEEEcC
Q psy12614 252 VSED----------ENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH-GNRLYSGGL 320 (708)
Q Consensus 252 ~s~~----------~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~-~~~l~s~~~ 320 (708)
|+|+ +.+|++|+.|+.|++|++.. +. .....+.+|...|.+++|+ +..|++++.
T Consensus 213 ~~p~~~~~~~~~~~~~~l~sgs~D~~i~iw~~~~--------~~-------~~~~~~~~h~~~V~~v~~~~~~~l~s~g~ 277 (287)
T d1pgua2 213 WKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKR--------PM-------KIIKALNAHKDGVNNLLWETPSTLVSSGA 277 (287)
T ss_dssp ECCCC------CCSCCEEEEEETTSCEEEEESSC--------TT-------CCEEETTSSTTCEEEEEEEETTEEEEEET
T ss_pred ecccccccccccCCCCeeEeecCCCeEEEEECCC--------CC-------eEEEEeCCCCCCeEEEEECCCCEEEEEEC
Confidence 9875 46899999999999999876 32 1345567899999999999 778999999
Q ss_pred CCeEEEEeC
Q psy12614 321 DSYLSLSYY 329 (708)
Q Consensus 321 d~~i~iw~~ 329 (708)
|+.|++|++
T Consensus 278 D~~v~iW~i 286 (287)
T d1pgua2 278 DACIKRWNV 286 (287)
T ss_dssp TSCEEEEEE
T ss_pred CCeEEEEEE
Confidence 999999986
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.97 E-value=4.7e-29 Score=244.75 Aligned_cols=249 Identities=12% Similarity=0.179 Sum_probs=199.2
Q ss_pred eeeccCC-CCcEEEEEEcC--CCCEEEEEeCCCcEEEEeCCCCCeE-------EEEEecCCCCCcEEEEEEe--CCEEEE
Q psy12614 19 IKFYAPE-PKVINCIACEP--KSSRLAVSRADQSIEIWDISETPHV-------DRVFIGDPLSNSIECLTWF--NDRLFS 86 (708)
Q Consensus 19 ~~~~~~h-~~~v~~~~~s~--~~~~la~~~~dg~v~iwd~~~~~~~-------~~~~~~h~~~~~v~~l~~~--~~~l~s 86 (708)
...+.+| ...|++++|+| ++++||+|+.||+|+|||+..+... ...+..|. ++|.+++|+ +.+|++
T Consensus 55 ~~~~~gh~~~~v~~v~fsP~~~g~~lasgs~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~--~~v~~v~~s~~~~~l~~ 132 (325)
T d1pgua1 55 VVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLA--GPISDISWDFEGRRLCV 132 (325)
T ss_dssp EEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCS--SCEEEEEECTTSSEEEE
T ss_pred eEEEeCCCCCCEEEEEEeeCCCCCEEEEEeCCCCEEEeeecCCcceeeeeccccccccccc--CcEEEEEECCCCCccce
Confidence 3446677 46799999998 6789999999999999999764321 22456777 999999999 788877
Q ss_pred Ec--CCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCE-EEEEeCCCcEEEEEccCCcEEEE-EecccccccEEEEE
Q psy12614 87 GG--LQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRL-LAAGTEQGHINLFQISDEGLLYE-KLLDRQQGRILCTA 162 (708)
Q Consensus 87 ~~--~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~-la~~~~d~~i~iwd~~~~~~~~~-~~~~~~~~~v~~~~ 162 (708)
++ .++.+++|++++++++..+.+|...|.+++|+|++.+ +++++.|+.+++||....+.... .....|...|.+++
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~v~~v~ 212 (325)
T d1pgua1 133 VGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVE 212 (325)
T ss_dssp EECCSSCSEEEEETTTCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEE
T ss_pred eeccccceEEEEeecccccceeeeecccccccccccccccceEEEeecccccccccccccccceecccccCCCCccEEee
Confidence 65 4778999999999999999999999999999999875 67789999999999988776532 23456778899999
Q ss_pred ECCC-CCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEEEEcCCCcEEEEeCCCCeeEEEe
Q psy12614 163 WHSS-GDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDV 240 (708)
Q Consensus 163 ~s~d-~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~ 240 (708)
|+|+ +.+|++++.| .|++||+++++.+..+..+.... ...+.++++.+...|++++.|+.|++||+++++++..+
T Consensus 213 ~~pd~~~~l~s~~~d~~i~iwd~~~~~~~~~l~~~~~~v---~~~~~s~~~~dg~~l~s~s~D~~i~iwd~~~~~~~~~~ 289 (325)
T d1pgua1 213 FSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPV---QGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKW 289 (325)
T ss_dssp ECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCC---CSCEEEEEESSSSEEEEEETTSEEEEEETTTTEEEEEE
T ss_pred eccccceeccccccccceeeeeecccccccccccccccc---ccceeeeeccCCCEEEEEeCCCeEEEEECCCCCEEEEE
Confidence 9997 6889999999 99999999999988876443222 34455666643336999999999999999999999887
Q ss_pred eccccC--eEEE--EEeCCCCEEEEEecCCeEEEEEc
Q psy12614 241 KTHKKD--ILAL--TVSEDENYLYCAGVDPTVVCFQR 273 (708)
Q Consensus 241 ~~~~~~--i~~~--~~s~~~~~l~~~~~dg~i~iw~~ 273 (708)
..|... +..+ .+.++ .+|++++.||.|++||+
T Consensus 290 ~~~~~~~~~~~~~~~~~~~-~~l~s~s~dg~i~vwdl 325 (325)
T d1pgua1 290 TLDKQQLGNQQVGVVATGN-GRIISLSLDGTLNFYEL 325 (325)
T ss_dssp ECCTTCGGGCEEEEEEEET-TEEEEEETTSCEEEEET
T ss_pred EecCCcccCeEEEEEECCC-CEEEEEECCCEEEEEEC
Confidence 765543 3334 44443 48899999999999996
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=8.9e-29 Score=239.30 Aligned_cols=282 Identities=16% Similarity=0.234 Sum_probs=222.6
Q ss_pred EEecCCCCCcEEEEEEeCCEEEEEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCC
Q psy12614 64 VFIGDPLSNSIECLTWFNDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDE 143 (708)
Q Consensus 64 ~~~~h~~~~~v~~l~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~ 143 (708)
...+|. ..|+|++|++++||+|+.||+|++||+++++++.++.+|.+.|++++| ++++|++|+.|+.|++|++..+
T Consensus 10 ~~~~~~--~~V~c~~~d~~~l~sgs~Dg~i~vWd~~~~~~~~~l~~H~~~V~~v~~--~~~~l~s~s~D~~i~~~~~~~~ 85 (293)
T d1p22a2 10 CRSETS--KGVYCLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTG 85 (293)
T ss_dssp CCCSSC--CCEEEEECCSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSC
T ss_pred ccCCCC--CCEEEEEEcCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEeeeec--ccceeecccccccccccccccc
Confidence 455677 899999999999999999999999999999999999999999999877 6789999999999999999998
Q ss_pred cEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEEEEcC
Q psy12614 144 GLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDS 222 (708)
Q Consensus 144 ~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~ 222 (708)
... .....+... ...+.+....++++..+ .+.+|+..+........... .+...+..+.+.++ .+++++.
T Consensus 86 ~~~--~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~v~~~~~~~~-~~~~~s~ 156 (293)
T d1p22a2 86 EML--NTLIHHCEA--VLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLV----GHRAAVNVVDFDDK-YIVSASG 156 (293)
T ss_dssp CEE--EEECCCCSC--EEEEECCTTEEEEEETTSCEEEEECSSSSCCEEEEEEC----CCSSCEEEEEEETT-EEEEEET
T ss_pred ccc--ccccccccc--cccccccccceeecccccceeEeecccccccccccccc----ccccccccceeccc-ccccccC
Confidence 876 333333332 23344566678888888 99999998766544443322 34677877777654 4778889
Q ss_pred CCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccc
Q psy12614 223 GGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHE 302 (708)
Q Consensus 223 dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 302 (708)
|+.|++||.++++.+..+.++...+..+.++ +..+++++.||.|++||+.+ +. ......+|.
T Consensus 157 d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~i~d~~~--------~~--------~~~~~~~~~ 218 (293)
T d1p22a2 157 DRTIKVWNTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIEC--------GA--------CLRVLEGHE 218 (293)
T ss_dssp TSEEEEEETTTCCEEEEEECCSSCEEEEEEE--TTEEEEEETTSCEEEEETTT--------CC--------EEEEECCCS
T ss_pred CCceeeecCCCCcEEEEEcccccccccccCC--CCeEEEecCCCEEEEEeccc--------ce--------eeeeecccc
Confidence 9999999999999999999999998888775 46899999999999999998 65 567777888
Q ss_pred cceEEEEEeCCEEEEEcCCCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEEEcCCeEEEEEecCCCCCCCCCCCC
Q psy12614 303 GDVKSLALHGNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSN 382 (708)
Q Consensus 303 ~~v~~l~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~ 382 (708)
..+..+...+.+|++++.||.|++||+.........
T Consensus 219 ~~v~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~-------------------------------------------- 254 (293)
T d1p22a2 219 ELVRCIRFDNKRIVSGAYDGKIKVWDLVAALDPRAP-------------------------------------------- 254 (293)
T ss_dssp SCEEEEECCSSEEEEEETTSCEEEEEHHHHTSTTSC--------------------------------------------
T ss_pred eeeeeccccceEEEEEcCCCEEEEEECCCCcccccc--------------------------------------------
Confidence 888877777999999999999999987543211111
Q ss_pred CCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEEE-cCCceEEEE
Q psy12614 383 TTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYS-TESCVRLHS 430 (708)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~-~d~~i~i~~ 430 (708)
..........+|.+.|.+++|+ +.+|+++ .|++|++||
T Consensus 255 --------~~~~~~~~~~~H~~~V~~v~~d--~~~l~s~s~Dg~i~iWD 293 (293)
T d1p22a2 255 --------AGTLCLRTLVEHSGRVFRLQFD--EFQIVSSSHDDTILIWD 293 (293)
T ss_dssp --------TTTTEEEEECCCSSCCCCEEEC--SSCEEECCSSSEEEEEC
T ss_pred --------CCceeeEEecCCCCCEEEEEEc--CCEEEEEecCCEEEEeC
Confidence 0112344456788899999884 5678874 599999997
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.97 E-value=3.3e-29 Score=248.16 Aligned_cols=295 Identities=14% Similarity=0.121 Sum_probs=223.1
Q ss_pred eeeeeeccCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEE--EEEecCCCCCcEEEEEEe---CCEEEEEcCC
Q psy12614 16 VHNIKFYAPEPKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVD--RVFIGDPLSNSIECLTWF---NDRLFSGGLQ 90 (708)
Q Consensus 16 ~~~~~~~~~h~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~--~~~~~h~~~~~v~~l~~~---~~~l~s~~~d 90 (708)
++.+++.++|.+.|++|+|+|++++||+|+.||+|+|||+.++.... ....+|. .+|.+++|+ +.+|++|+.|
T Consensus 1 ~~~v~~~~~h~d~I~~l~fsp~~~~L~s~s~Dg~v~iwd~~~~~~~~~~~~~~~h~--~~V~~v~f~~~~~~~l~sg~~d 78 (342)
T d1yfqa_ 1 MQIVQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYK--HPLLCCNFIDNTDLQIYVGTVQ 78 (342)
T ss_dssp CEEEECSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECS--SCEEEEEEEESSSEEEEEEETT
T ss_pred CCeEEcCCCCCCCEEEEEEeCCCCEEEEEECCCeEEEEEccCCCcceEEEEecCCC--CCEEEEEEeCCCCCEEEEcccc
Confidence 35677899999999999999999999999999999999998754332 2344788 999999998 4589999999
Q ss_pred CcEEEEECCCCeEeEEEeecCCc-eEEEEEecCCCEEEEEeCCCcEEEEEccCCcE--EEEEecccc--cccEEEEEECC
Q psy12614 91 GFVNEYDMRRLNIKSSTAVTSGT-CWCLSVHKKKRLLAAGTEQGHINLFQISDEGL--LYEKLLDRQ--QGRILCTAWHS 165 (708)
Q Consensus 91 ~~i~vwd~~~~~~~~~~~~~~~~-v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~--~~~~~~~~~--~~~v~~~~~s~ 165 (708)
|+|++|++..+........+... .....+.++...+++++.++.+++||++.+.. ........+ ........+.+
T Consensus 79 ~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (342)
T d1yfqa_ 79 GEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDT 158 (342)
T ss_dssp SCEEEECSSSSSSEEECBSCCCCSCEEEEEEETTTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEE
T ss_pred cceeeeecccccccccccccccccccccccccccccccccccccccceeeccccccceeeecccccccccceeeeeeeec
Confidence 99999999998877766655443 45566677888999999999999999874332 111222222 23445667778
Q ss_pred CCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccC-C-EEEEEcCCCcEEEEeCCCCeeE-----
Q psy12614 166 SGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCAD-F-TIITGDSGGFVRFWDGKTGVQW----- 237 (708)
Q Consensus 166 d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~-~l~~~~~dg~i~~wd~~~~~~~----- 237 (708)
++..+++++.| .|++||+..+.......... .....+.+..+.+. + .+++++.+|.+.+|+.......
T Consensus 159 ~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~s~dg~~~v~~~~~~~~~~~~~~ 234 (342)
T d1yfqa_ 159 NSSRLIVGMNNSQVQWFRLPLCEDDNGTIEES----GLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSK 234 (342)
T ss_dssp CSSEEEEEESTTEEEEEESSCCTTCCCEEEEC----SCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTT
T ss_pred cCCceeeecCCCcEEEEecccCcccceeeeec----ccccceeeeEeecCCCCEEEeecCCCeEEEEEecCCcceeeccc
Confidence 89999999999 99999998776544433322 22445666666554 4 4889999999999987643211
Q ss_pred ----E------EeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEe-ccccceE
Q psy12614 238 ----S------DVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRV-IHEGDVK 306 (708)
Q Consensus 238 ----~------~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~v~ 306 (708)
. ....|...+.+++|+|++++|++|+.||.|++||+.+ ++ .+..+. .|...+.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~lasg~~Dg~v~vWD~~~--------~~--------~l~~~~~~~~~~~~ 298 (342)
T d1yfqa_ 235 RFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQT--------RK--------KIKNFAKFNEDSVV 298 (342)
T ss_dssp CEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTT--------TE--------EEEECCCCSSSEEE
T ss_pred cceeeeeeeccCCCcccccceeEEecCCccEEEEECCCCEEEEEECCC--------Cc--------EEEEecCCCCCEEE
Confidence 1 1134667899999999999999999999999999998 54 444443 3555566
Q ss_pred EEEEeCCEEEEEcCCCeEEEEeCCCC
Q psy12614 307 SLALHGNRLYSGGLDSYLSLSYYPPK 332 (708)
Q Consensus 307 ~l~~~~~~l~s~~~d~~i~iw~~~~~ 332 (708)
+++++++.+++++.|+.+++|.....
T Consensus 299 ~~s~~~~~l~~a~sdd~~~~~~~~~~ 324 (342)
T d1yfqa_ 299 KIACSDNILCLATSDDTFKTNAAIDQ 324 (342)
T ss_dssp EEEECSSEEEEEEECTHHHHCSSSCT
T ss_pred EEEeCCCEEEEEEcCCcEEEeeeeCC
Confidence 66666999999999998888866443
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.97 E-value=7.1e-29 Score=239.42 Aligned_cols=265 Identities=13% Similarity=0.165 Sum_probs=204.8
Q ss_pred EEEecCCCCCcEEEEEEeCCEEEEEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccC
Q psy12614 63 RVFIGDPLSNSIECLTWFNDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISD 142 (708)
Q Consensus 63 ~~~~~h~~~~~v~~l~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~ 142 (708)
+++.||. .+|++|+|+. |++|+.||+|++||+.++. ..|...|.++++++++ .+++++.|+++++|++..
T Consensus 7 ~~l~gH~--~~I~~l~~s~--l~sgs~Dg~v~~Wd~~~~~-----~~h~~~V~~~~~~~~~-~~~s~s~D~~v~~w~~~~ 76 (287)
T d1pgua2 7 KTISGHN--KGITALTVNP--LISGSYDGRIMEWSSSSMH-----QDHSNLIVSLDNSKAQ-EYSSISWDDTLKVNGITK 76 (287)
T ss_dssp EEECCCS--SCEEEEETTT--TEEEETTSCEEETTTTEEE-----CCCCSCEEEEECCSTT-CCEEEETTTEEEETTEEE
T ss_pred EEECCCC--CceEEEEECc--EEEEeCCCeEEEEECCCCC-----CCCCCCEEEEEecCCC-eEEEEeeccccccccccc
Confidence 4999999 9999999975 9999999999999987743 5799999999999765 578899999999998754
Q ss_pred CcEEEEEecccccccEEEEEECCCCCEEEEecCCeEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCC-EEEEEc
Q psy12614 143 EGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAAAVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADF-TIITGD 221 (708)
Q Consensus 143 ~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~~~~ 221 (708)
.+ ....+..+++++++..+++++.+.+.+|+..+++.+..+... ..+. ++++++ .+++++
T Consensus 77 ~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~--~~~~~~~~~~v~~ 137 (287)
T d1pgua2 77 HE---------FGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLN--------SPGS--AVSLSQNYVAVGL 137 (287)
T ss_dssp EE---------CSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECS--------SCEE--EEEECSSEEEEEE
T ss_pred cc---------cccceeeeeeccCCceEEEeecccceeeeccceeeeeecccc--------ceee--eeeccCcceeeec
Confidence 22 234577889999998888877778999999999988877643 2333 455555 455555
Q ss_pred CC-CcEEEEeCCCCeeEEEee-ccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEe
Q psy12614 222 SG-GFVRFWDGKTGVQWSDVK-THKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRV 299 (708)
Q Consensus 222 ~d-g~i~~wd~~~~~~~~~~~-~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 299 (708)
.+ +.+++|++...+....+. .|...+++++|+|++++|++++.||.|++||+.+ ++ .....+.
T Consensus 138 ~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~i~i~d~~~--------~~-------~~~~~~~ 202 (287)
T d1pgua2 138 EEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQS--------RE-------VKTSRWA 202 (287)
T ss_dssp TTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT--------TE-------EEECCSC
T ss_pred cccceeeeeeccccceeeeeeeccCCceeEEEeccCccccccccccccccceeecc--------cc-------ccccccc
Confidence 55 579999997766655543 4778899999999999999999999999999988 43 1223456
Q ss_pred ccccceEEEEEe------------CCEEEEEcCCCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEEEcCCeEEEE
Q psy12614 300 IHEGDVKSLALH------------GNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELW 367 (708)
Q Consensus 300 ~~~~~v~~l~~~------------~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~i~ 367 (708)
+|...|.+++|+ +.++++|+.|+.|++|++..
T Consensus 203 ~h~~~v~~~~~~p~~~~~~~~~~~~~~l~sgs~D~~i~iw~~~~------------------------------------ 246 (287)
T d1pgua2 203 FRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKR------------------------------------ 246 (287)
T ss_dssp CCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSC------------------------------------
T ss_pred ccccccceeeecccccccccccCCCCeeEeecCCCeEEEEECCC------------------------------------
Confidence 889999999986 24566666666666666532
Q ss_pred EecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEEEcCCceEEEEE
Q psy12614 368 SLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYSTESCVRLHSL 431 (708)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~d~~i~i~~~ 431 (708)
.. .......+|...|++++|+|++.++.+|.|+.|++|++
T Consensus 247 ----~~--------------------~~~~~~~~h~~~V~~v~~~~~~~l~s~g~D~~v~iW~i 286 (287)
T d1pgua2 247 ----PM--------------------KIIKALNAHKDGVNNLLWETPSTLVSSGADACIKRWNV 286 (287)
T ss_dssp ----TT--------------------CCEEETTSSTTCEEEEEEEETTEEEEEETTSCEEEEEE
T ss_pred ----CC--------------------eEEEEeCCCCCCeEEEEECCCCEEEEEECCCeEEEEEE
Confidence 11 23344457888899999999887655677999999986
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.96 E-value=4.4e-30 Score=257.01 Aligned_cols=326 Identities=13% Similarity=0.064 Sum_probs=230.6
Q ss_pred EEEEEec-CCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC---eEEEEEcCCCceEE
Q psy12614 115 WCLSVHK-KKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA---AVRVWDIHKGHAIH 190 (708)
Q Consensus 115 ~~~~~s~-~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d---~i~iwd~~~~~~~~ 190 (708)
.+..||| ||+++|+++ +|.|++||..++... + + +|...|.+++|+|||++|++++.+ .|++||+.+++...
T Consensus 6 ~~~~fSP~dG~~~a~~~-~g~v~v~d~~~~~~~--~-~-~~~~~v~~~~~spDg~~l~~~~~~~g~~v~v~d~~~~~~~~ 80 (360)
T d1k32a3 6 FAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVL--K-V-PEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGKAEK 80 (360)
T ss_dssp GEEEEEECGGGCEEEEE-TTEEEEECTTSSBEE--E-C-SCCSCEEEEEECSSSEEEEEEEETTEEEEEEEETTTCCEEE
T ss_pred hcccccCCCCCEEEEEE-CCeEEEEECCCCcEE--E-c-cCCCCEEEEEECCCCCEEEEEEcCCCCEEEEEECCCCcEEE
Confidence 3467999 999999876 479999999988875 2 3 689999999999999999876644 79999998887654
Q ss_pred EEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEE
Q psy12614 191 KMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVV 269 (708)
Q Consensus 191 ~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~ 269 (708)
. . .+...+.+++|+|||+ +++++.++.+++|+..+++....+..|...+.+++|+|||++|+.+..+....
T Consensus 81 ~-~-------~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~la~~~~~~~~~ 152 (360)
T d1k32a3 81 F-E-------ENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGE 152 (360)
T ss_dssp C-C-------CCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSST
T ss_pred e-e-------CCCceEEeeeecccccccceeccccccccccccccceeeeeecccccccchhhccceeeeeeeccccccc
Confidence 2 2 3378899999999995 89999999999999999999999999999999999999999998765432210
Q ss_pred EEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEeCCEEEEEcCCCeEEEEeCCCCceeecCccCCCCceEEE
Q psy12614 270 CFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALHGNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSL 349 (708)
Q Consensus 270 iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~ 349 (708)
+.+..++.+++|++.+.......
T Consensus 153 ----------------------------------------------~~~~~~~~~~v~d~~~~~~~~~~----------- 175 (360)
T d1k32a3 153 ----------------------------------------------TDGYVMQAIHVYDMEGRKIFAAT----------- 175 (360)
T ss_dssp ----------------------------------------------TCSCCEEEEEEEETTTTEEEECS-----------
T ss_pred ----------------------------------------------eeeccccceeeeccccCceeeec-----------
Confidence 01123345666666544322222
Q ss_pred EcCCcEEEEEcCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEE-EcCCceEE
Q psy12614 350 AKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAY-STESCVRL 428 (708)
Q Consensus 350 s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~-~~d~~i~i 428 (708)
.+...+..++|+|||++|++ +.++.+.+
T Consensus 176 ---------------------------------------------------~~~~~~~~~~~spdg~~l~~~s~~~~~~~ 204 (360)
T d1k32a3 176 ---------------------------------------------------TENSHDYAPAFDADSKNLYYLSYRSLDPS 204 (360)
T ss_dssp ---------------------------------------------------CSSSBEEEEEECTTSCEEEEEESCCCCCE
T ss_pred ---------------------------------------------------ccccccccccccCCCCEEEEEeCCCceEc
Confidence 34456677889999998887 45888888
Q ss_pred EEEEecCC----cceeEEeecCCcccccceeEEEEEecCCCeEEEEecCCc-----EEEecCCCeEEEEEecCCCCCccC
Q psy12614 429 HSLDLDGD----KPQISRIKNLPAPLFKSIFTHVLISADSTLLLAVSLNGP-----LYIIDLSSLEIKYCVDPYKSNLMS 499 (708)
Q Consensus 429 ~~~~~~~~----~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~~~~~dg~-----i~~~~~~~~~~~~~~~~~~~~~~~ 499 (708)
|+...... ...... +..+.. .+..+.|++++..++.+..+.. +|.+........ .+....+
T Consensus 205 ~d~~~~~~~~~~~~~~~~---~~~~~~--~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~---- 274 (360)
T d1k32a3 205 PDRVVLNFSFEVVSKPFV---IPLIPG--SPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYR-MIIPLES---- 274 (360)
T ss_dssp ECSSSSCEECCSCBEEEE---EESSTT--CCCGGGCCCGGGSCCCCCCCCTTGGGGCEECSCCCBCEE-EEEECSS----
T ss_pred ccccccceeeccccceEE---EecccC--ccccceECCCcCcccccceeecccccceeecccCcCcee-EeeecCC----
Confidence 87543110 001111 111111 1122567888887776554432 666654432222 2222222
Q ss_pred cceEEEEEC---CCCcEEEEEecCCeEEEEECCceeeecCCCCCCceEEEEcCCCCEEEEEecCCcEEEEEcCCCCCC
Q psy12614 500 DVISLVQMS---ECKQYIVCADRKSHVVIWKNGQHHASLPRYRKPSTAMAIHPTLSTLVTVYSDHRIVEFDLNRKAFT 574 (708)
Q Consensus 500 ~~i~~~~~s---~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~dg~i~vwd~~~~~~~ 574 (708)
.+..+.+. +++.++++++.++.|++||+.+... ..|.+.|.+++|||||++|++++.||.|++||++.++..
T Consensus 275 -~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~--~~~~~~v~~~~~SpDG~~l~~~~~Dg~i~v~d~~~~~~~ 349 (360)
T d1k32a3 275 -SILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKV--TEVKNNLTDLRLSADRKTVMVRKDDGKIYTFPLEKPEDE 349 (360)
T ss_dssp -EEEEEECCCCCSHHHHHHCCCCCEEEEEEETTTCCE--EEEEEEEEEEEECTTSCEEEEEETTSCEEEEESSCTTSC
T ss_pred -CceEEEEEecCCCeeEEEecCCCCEEEEEECCCCeE--EEecCCcCEEEECCCCCEEEEEECCCeEEEEECCCCCcc
Confidence 34444444 4455788888999999999995433 234567999999999999999999999999999998755
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.96 E-value=6.5e-29 Score=248.42 Aligned_cols=216 Identities=13% Similarity=0.093 Sum_probs=172.3
Q ss_pred EEEEcC-CCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCC--cEEEEECCCCeEeE
Q psy12614 31 CIACEP-KSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQG--FVNEYDMRRLNIKS 105 (708)
Q Consensus 31 ~~~~s~-~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~--~i~vwd~~~~~~~~ 105 (708)
.-.||| ||+++|+++ +|.|.+||..++.... .+|. ..|.+++|+ |++|++++.+. .|++||+++++..
T Consensus 7 ~~~fSP~dG~~~a~~~-~g~v~v~d~~~~~~~~---~~~~--~~v~~~~~spDg~~l~~~~~~~g~~v~v~d~~~~~~~- 79 (360)
T d1k32a3 7 AEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVLK---VPEP--LRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGKAE- 79 (360)
T ss_dssp EEEEEECGGGCEEEEE-TTEEEEECTTSSBEEE---CSCC--SCEEEEEECSSSEEEEEEEETTEEEEEEEETTTCCEE-
T ss_pred cccccCCCCCEEEEEE-CCeEEEEECCCCcEEE---ccCC--CCEEEEEECCCCCEEEEEEcCCCCEEEEEECCCCcEE-
Confidence 356999 999999987 5799999999887643 3788 999999999 88888776553 7999999987655
Q ss_pred EEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEec----------C
Q psy12614 106 STAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGC----------A 175 (708)
Q Consensus 106 ~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~----------~ 175 (708)
.+..|...|.+++|+||+++|++++.++.+++|+..+++.. ..+..|...+.+++|+|||++|+.+. .
T Consensus 80 ~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~spdg~~la~~~~~~~~~~~~~~ 157 (360)
T d1k32a3 80 KFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPT--VIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYV 157 (360)
T ss_dssp ECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEE--EEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCC
T ss_pred EeeCCCceEEeeeecccccccceecccccccccccccccee--eeeecccccccchhhccceeeeeeeccccccceeecc
Confidence 56789999999999999999999999999999999999886 67778888999999999999998643 3
Q ss_pred C-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCee-------EEEeeccccC
Q psy12614 176 A-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQ-------WSDVKTHKKD 246 (708)
Q Consensus 176 d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~-------~~~~~~~~~~ 246 (708)
+ .+++||+.+++..... .+...+..++|+|||+ |++++.++.+.+|+...... ...+..+...
T Consensus 158 ~~~~~v~d~~~~~~~~~~--------~~~~~~~~~~~spdg~~l~~~s~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 229 (360)
T d1k32a3 158 MQAIHVYDMEGRKIFAAT--------TENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGS 229 (360)
T ss_dssp EEEEEEEETTTTEEEECS--------CSSSBEEEEEECTTSCEEEEEESCCCCCEECSSSSCEECCSCBEEEEEESSTTC
T ss_pred ccceeeeccccCceeeec--------ccccccccccccCCCCEEEEEeCCCceEcccccccceeeccccceEEEecccCc
Confidence 3 6899999887654332 2266788899999996 88999999999999765432 2333445555
Q ss_pred eEEEEEeCCCCEEEEEe
Q psy12614 247 ILALTVSEDENYLYCAG 263 (708)
Q Consensus 247 i~~~~~s~~~~~l~~~~ 263 (708)
+..+.+++++..++++.
T Consensus 230 ~~~~~~s~~~~~~~~~~ 246 (360)
T d1k32a3 230 PNPTKLVPRSMTSEAGE 246 (360)
T ss_dssp CCGGGCCCGGGSCCCCC
T ss_pred cccceECCCcCcccccc
Confidence 55666777776665443
|
| >d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Paracoccus denitrificans [TaxId: 266]
Probab=99.96 E-value=2.7e-27 Score=240.51 Aligned_cols=351 Identities=10% Similarity=0.010 Sum_probs=251.6
Q ss_pred EEEEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEE---EecccccccEEE
Q psy12614 84 LFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYE---KLLDRQQGRILC 160 (708)
Q Consensus 84 l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~---~~~~~~~~~v~~ 160 (708)
+++.+.+|+|.+||..+++.+..+..+ ..+..++|||||+++++++.|+.|++||+.+++.... .....|.+.+.+
T Consensus 35 ~v~~~d~g~v~v~D~~t~~v~~~~~~g-~~~~~v~fSpDG~~l~~~s~dg~v~~~d~~t~~~~~~~~i~~~~~~~~~~~s 113 (432)
T d1qksa2 35 SVTLRDAGQIALIDGSTYEIKTVLDTG-YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARSIETS 113 (432)
T ss_dssp EEEETTTTEEEEEETTTCCEEEEEECS-SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSEEEEEEEC
T ss_pred EEEEcCCCEEEEEECCCCcEEEEEeCC-CCeeEEEECCCCCEEEEEcCCCCEEEEEeeCCCceEEEEEecCCCCCCeEEe
Confidence 588899999999999999999999877 4699999999999999999999999999988764221 223456677778
Q ss_pred EEECCCCCEE-EEecCC-eEEEEEcCCCceEEEEEecccC----CCCCceeEEEEEEccCCE--EEEEcCCCcEEEEeCC
Q psy12614 161 TAWHSSGDYL-VTGCAA-AVRVWDIHKGHAIHKMSLDKSS----KFSKNTAVWCVAFCADFT--IITGDSGGFVRFWDGK 232 (708)
Q Consensus 161 ~~~s~d~~~l-~~~~~d-~i~iwd~~~~~~~~~~~~~~~~----~~~~~~~v~~~~~~~~~~--l~~~~~dg~i~~wd~~ 232 (708)
..|+|||++| ++++.+ .|++||..+++.+..+...... .+........+.++|+|. +++...++.|.+||..
T Consensus 114 ~~~SpDG~~l~vs~~~~~~v~i~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~~~vs~~~~~~i~~~d~~ 193 (432)
T d1qksa2 114 KMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYT 193 (432)
T ss_dssp CSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETT
T ss_pred cccCCCCCEEEEEcCCCCeEEEEeCccccceeeeccCCccccceeccCCCceeEEEECCCCCEEEEEEccCCeEEEEEcc
Confidence 8899999987 566667 9999999999998887643211 112356677899999994 5677888999999998
Q ss_pred CCeeEEEee-ccccCeEEEEEeCCCCEEEEEecC-CeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEE
Q psy12614 233 TGVQWSDVK-THKKDILALTVSEDENYLYCAGVD-PTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLAL 310 (708)
Q Consensus 233 ~~~~~~~~~-~~~~~i~~~~~s~~~~~l~~~~~d-g~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~ 310 (708)
+++...... .+...+..++|+|||+++++++.+ +.+.+++..+ ++ ...... +
T Consensus 194 ~~~~~~~~~i~~g~~~~~~~~spdg~~~~va~~~~~~v~v~d~~~--------~~--------~~~~~~-~--------- 247 (432)
T d1qksa2 194 DLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKE--------GK--------LVAIED-T--------- 247 (432)
T ss_dssp CSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTT--------TE--------EEEEEE-C---------
T ss_pred CCCcceEEEEcccCccccceECCCCCEEEEeccccceEEEeeccc--------ce--------EEEEec-c---------
Confidence 876544332 345678899999999988877764 5778888776 32 111100 0
Q ss_pred eCCEEEEEcCCCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEEEcCCeEEEEEecCCCCCCCCCCCCCCcccCCC
Q psy12614 311 HGNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPLLS 390 (708)
Q Consensus 311 ~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~ 390 (708)
....
T Consensus 248 -----------------------------------------------------------g~~~----------------- 251 (432)
T d1qksa2 248 -----------------------------------------------------------GGQT----------------- 251 (432)
T ss_dssp -----------------------------------------------------------SSSS-----------------
T ss_pred -----------------------------------------------------------Cccc-----------------
Confidence 0000
Q ss_pred CceEEEEEEecCCCceEEEEeCCCCcEEEEEc--CCceEEEEEEecCCcceeEEeecCCcccccceeEEEEEecCCCeEE
Q psy12614 391 FPRLIVKMSAVNNATIRCSVVSNDGKYVAYST--ESCVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVLISADSTLLL 468 (708)
Q Consensus 391 ~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~--d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~ 468 (708)
.+........+...+...+... ++.+.+|.... .. .+.+ ...+....++|++..++
T Consensus 252 ----------~~~~~~~~~~~~~~g~~~~~~~lg~~~v~~~~~~~--~~--------~~~~--~~~v~~~~~~~~g~~~~ 309 (432)
T d1qksa2 252 ----------PHPGRGANFVHPTFGPVWATSHMGDDSVALIGTDP--EG--------HPDN--AWKILDSFPALGGGSLF 309 (432)
T ss_dssp ----------BCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCT--TT--------CTTT--BTSEEEEEECSCSCCCC
T ss_pred ----------cccCcccceecCCCCceecccccCCceEEeccccc--cc--------cccc--ccEEEEEEEcCCCCeEE
Confidence 1111222333444444444433 67777886543 11 2333 23556689999999999
Q ss_pred EEecCCc--EEEecCCCeEEEEEecCCCCCccCcceEEEEECCCCcEEEEEecCCeEEEEECCceeeecCCCCCCceEEE
Q psy12614 469 AVSLNGP--LYIIDLSSLEIKYCVDPYKSNLMSDVISLVQMSECKQYIVCADRKSHVVIWKNGQHHASLPRYRKPSTAMA 546 (708)
Q Consensus 469 ~~~~dg~--i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~v~~l~ 546 (708)
+++.+.. +|...... .+ ......+++ ||++.|++++.|+.+++|++.+. ..+..|...+.+++
T Consensus 310 ~~s~p~~~~lw~~~~~~-----------~~--~~~~~sv~v-pDg~~la~~s~d~~~k~w~~~~~-~~l~~~~~~v~~~~ 374 (432)
T d1qksa2 310 IKTHPNSQYLYVDATLN-----------PE--AEISGSVAV-FDIKAMTGDGSDPEFKTLPIAEW-AGITEGQPRVVQGE 374 (432)
T ss_dssp EECCTTCSEEEEECTTC-----------SS--HHHHTCEEE-EEGGGCCCSSSCCCEEEECHHHH-HTCCSSCCEEEEEE
T ss_pred EEecCCccceeecccCC-----------CC--CCeeeEEEE-EechhhcccccCCceEecccccc-cccCCCCCcEEEeE
Confidence 8888777 77654431 11 333344555 89999999999999999998654 34456778899999
Q ss_pred EcCCCCEEEEEe-----cCCcEEEEEcCCCCCC
Q psy12614 547 IHPTLSTLVTVY-----SDHRIVEFDLNRKAFT 574 (708)
Q Consensus 547 ~s~d~~~l~~~~-----~dg~i~vwd~~~~~~~ 574 (708)
|||||++|+++. .+|.|.|||..+.+..
T Consensus 375 fS~DG~~v~~S~~~~~~~~g~i~i~D~~T~k~~ 407 (432)
T d1qksa2 375 FNKDGTEVWFSVWNGKDQESALVVVDDKTLELK 407 (432)
T ss_dssp ECTTSSEEEEEEECCTTSCCEEEEEETTTTEEE
T ss_pred ECCCCCEEEEEEecCCCCCCcEEEEECCCceEE
Confidence 999999886654 4688999999998764
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.96 E-value=3.7e-27 Score=238.11 Aligned_cols=290 Identities=16% Similarity=0.131 Sum_probs=199.0
Q ss_pred EEecCCCCCcEEEEEEeCCEEEEEcCCCcEEEEECCCCe------EeEEEeecCCceEEEEEe---c----CCCEEEEEe
Q psy12614 64 VFIGDPLSNSIECLTWFNDRLFSGGLQGFVNEYDMRRLN------IKSSTAVTSGTCWCLSVH---K----KKRLLAAGT 130 (708)
Q Consensus 64 ~~~~h~~~~~v~~l~~~~~~l~s~~~d~~i~vwd~~~~~------~~~~~~~~~~~v~~~~~s---~----~~~~la~~~ 130 (708)
..++|. +.|.+++++++++++++.|++|++||..+.. .......|...+..+... + ++.++++++
T Consensus 9 ~~~~H~--~~I~~v~~~~~~l~S~S~D~~iriWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 86 (393)
T d1sq9a_ 9 AGKAHD--ADIFSVSACNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTS 86 (393)
T ss_dssp ESSCSS--SCEEEEEECSSEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEE
T ss_pred cCCccc--CccEEEEEeCCEEEEEECCCeEEEEECCCCCCCcccceeEeeeeccCCceEeeeEeeeccCCCCCcEEEEEe
Confidence 567999 9999999999999999999999999976643 122233444443332221 1 234678899
Q ss_pred CCCcEEEEEccCCcE---EEEEe-----cccccccEEEEEECCC-----CCEEEEecCC-eEEEEEcCCCc---------
Q psy12614 131 EQGHINLFQISDEGL---LYEKL-----LDRQQGRILCTAWHSS-----GDYLVTGCAA-AVRVWDIHKGH--------- 187 (708)
Q Consensus 131 ~d~~i~iwd~~~~~~---~~~~~-----~~~~~~~v~~~~~s~d-----~~~l~~~~~d-~i~iwd~~~~~--------- 187 (708)
.||.|++|++..... ..... ...+...+..++|.++ +.++++++.| .+++|++....
T Consensus 87 ~dg~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~vw~~~~~~~~~~~~~~~ 166 (393)
T d1sq9a_ 87 FSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLN 166 (393)
T ss_dssp TTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTC
T ss_pred CCCcEEEEEccCCCceeeeeccccceeeeccCCCceEEEEEecCCCcccccEEEEEcCCCcEEEEEeecCCcccceeeee
Confidence 999999999864321 10011 1224456778888765 4678899999 99999974221
Q ss_pred --eEEEEEecccCCCCCceeEEEEEEccCCEEEEEcCCCcEEEEeCCCCeeEEEe------eccccCeEEEEEeCCCCEE
Q psy12614 188 --AIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDV------KTHKKDILALTVSEDENYL 259 (708)
Q Consensus 188 --~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~------~~~~~~i~~~~~s~~~~~l 259 (708)
....+.........+...+.+++|+|++.+++|+.||.|++||+.+++.+..+ .+|...|.+++|+||+++|
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~l~~h~~~V~~l~~spdg~~l 246 (393)
T d1sq9a_ 167 WSPTLELQGTVESPMTPSQFATSVDISERGLIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLL 246 (393)
T ss_dssp CCCEEEEEEEECCSSSSCCCCCEEEECTTSEEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEE
T ss_pred eccceecccceecccCCCCcEEEEEECCCCEEEEEeCCCcEEEEeecccccccccccccccccccceEEEccccccccee
Confidence 11111111100113366688999999999999999999999999999877654 4688999999999999999
Q ss_pred EEEecCC---eEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEEEcCCCeEEEEeCCCCce
Q psy12614 260 YCAGVDP---TVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSGGLDSYLSLSYYPPKTL 334 (708)
Q Consensus 260 ~~~~~dg---~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~~~~ 334 (708)
++|+.|+ .|++||+.++........ ..........+.+|.+.|++++|+ +++|++++.|++|++||+.++.+
T Consensus 247 ~sgs~D~t~~~i~lwd~~~g~~~~~l~~---~~~~~~~~~~~~gH~~~V~~l~fspd~~~l~S~s~D~~v~vWd~~~g~~ 323 (393)
T d1sq9a_ 247 AIAHDSNSFGCITLYETEFGERIGSLSV---PTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKER 323 (393)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEECB---C--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEE
T ss_pred eeecCCCCcceeeecccccceeeeeecc---ccccccceeeeecccCceeeeccCCCCCeeEEECCCCEEEEEECCCCCE
Confidence 9999887 489999988111100000 000111223345899999999999 89999999999999999998873
Q ss_pred -eecCccCCCC----ceEEEEcCCcEEEE
Q psy12614 335 -VKYPCTLAQS----TPVSLAKDIQHVLL 358 (708)
Q Consensus 335 -~~~~~~~~~~----~~~~~s~~~~~l~~ 358 (708)
..+.++.... ..+++++++..++.
T Consensus 324 ~~~l~gH~~~v~~~~~~~~~~~~~~~~~~ 352 (393)
T d1sq9a_ 324 ITTLNMHCDDIEIEEDILAVDEHGDSLAE 352 (393)
T ss_dssp EEEEECCGGGCSSGGGCCCBCTTSCBCSS
T ss_pred EEEECCcCCcccCCccEEEECCCCCEEEE
Confidence 3333332222 35778888876653
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.95 E-value=1.1e-26 Score=229.68 Aligned_cols=296 Identities=11% Similarity=0.040 Sum_probs=208.2
Q ss_pred eeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe---
Q psy12614 235 VQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--- 311 (708)
Q Consensus 235 ~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--- 311 (708)
+.++..++|...|++++|+|++++|++|+.||+|++||+.. +. .........+|.++|.+++|+
T Consensus 2 ~~v~~~~~h~d~I~~l~fsp~~~~L~s~s~Dg~v~iwd~~~--------~~-----~~~~~~~~~~h~~~V~~v~f~~~~ 68 (342)
T d1yfqa_ 2 QIVQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDI--------QA-----KNVDLLQSLRYKHPLLCCNFIDNT 68 (342)
T ss_dssp EEEECSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEET--------TT-----TEEEEEEEEECSSCEEEEEEEESS
T ss_pred CeEEcCCCCCCCEEEEEEeCCCCEEEEEECCCeEEEEEccC--------CC-----cceEEEEecCCCCCEEEEEEeCCC
Confidence 45677789999999999999999999999999999999987 32 112334445799999999998
Q ss_pred CCEEEEEcCCCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEEEcCCeEEEEEecCCCCCCCCCCCCCCcccCCCC
Q psy12614 312 GNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSF 391 (708)
Q Consensus 312 ~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (708)
+.+|++|+.|+.+++|++.........
T Consensus 69 ~~~l~sg~~d~~v~~w~~~~~~~~~~~----------------------------------------------------- 95 (342)
T d1yfqa_ 69 DLQIYVGTVQGEILKVDLIGSPSFQAL----------------------------------------------------- 95 (342)
T ss_dssp SEEEEEEETTSCEEEECSSSSSSEEEC-----------------------------------------------------
T ss_pred CCEEEEcccccceeeeecccccccccc-----------------------------------------------------
Confidence 458999999999999998654321111
Q ss_pred ceEEEEEEecCCCceEEEEeCCCCcEEEE-EcCCceEEEEEEecCCcceeEEeecCCcccccceeEEEEEecCCCeEEEE
Q psy12614 392 PRLIVKMSAVNNATIRCSVVSNDGKYVAY-STESCVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVLISADSTLLLAV 470 (708)
Q Consensus 392 ~~~~~~~~~~~~~~i~~~~~s~~g~~l~~-~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~~~ 470 (708)
...+........+.+++..+++ +.++.+++||+........... ....+..........+.+++..++++
T Consensus 96 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (342)
T d1yfqa_ 96 -------TNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVK--NLNSNNTKVKNKIFTMDTNSSRLIVG 166 (342)
T ss_dssp -------BSCCCCSCEEEEEEETTTEEEEEETTSEEEEECHHHHTTBCEEEE--ESCSSSSSSCCCEEEEEECSSEEEEE
T ss_pred -------cccccccccccccccccccccccccccccceeeccccccceeeec--ccccccccceeeeeeeeccCCceeee
Confidence 0011222233444555666666 5699999999876443322221 13332222233347888999999999
Q ss_pred ecCCc--EEEecCCCeEEEEEecCCCCCccCcceEEEE-ECCCCcEEEEEecCCeEEEEECCcee---------------
Q psy12614 471 SLNGP--LYIIDLSSLEIKYCVDPYKSNLMSDVISLVQ-MSECKQYIVCADRKSHVVIWKNGQHH--------------- 532 (708)
Q Consensus 471 ~~dg~--i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~s~~~~~l~~~~~d~~i~iw~~~~~~--------------- 532 (708)
+.|+. +|++.............. . ...+.+.. ++.++..+++++.||.+.+|++....
T Consensus 167 ~~d~~i~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~s~dg~~~v~~~~~~~~~~~~~~~~~~~~~~ 242 (342)
T d1yfqa_ 167 MNNSQVQWFRLPLCEDDNGTIEESG--L--KYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHR 242 (342)
T ss_dssp ESTTEEEEEESSCCTTCCCEEEECS--C--SSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCC
T ss_pred cCCCcEEEEecccCcccceeeeecc--c--ccceeeeEeecCCCCEEEeecCCCeEEEEEecCCcceeeccccceeeeee
Confidence 99998 888765532222222111 1 23444444 45578899999999999999987110
Q ss_pred --eecCCCCCCceEEEEcCCCCEEEEEecCCcEEEEEcCCCCCCchhhhhhccCchhhhcCCCCeeEEEeCCCCCceEEE
Q psy12614 533 --ASLPRYRKPSTAMAIHPTLSTLVTVYSDHRIVEFDLNRKAFTTFSRKLETNHPNEWLSRQLPVLGIEFDPQDSSLIYL 610 (708)
Q Consensus 533 --~~~~~~~~~v~~l~~s~d~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~~~~l~~~ 610 (708)
.....|...|++++|+|++++||+|+.||.|++||+.+++.+ ..+. +...+..++|+|++++|+++
T Consensus 243 ~~~~~~~~~~~v~~l~~sp~~~~lasg~~Dg~v~vWD~~~~~~l-----------~~~~-~~~~~~~~~~s~~~~~l~~a 310 (342)
T d1yfqa_ 243 LNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKI-----------KNFA-KFNEDSVVKIACSDNILCLA 310 (342)
T ss_dssp CCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEE-----------EECC-CCSSSEEEEEEECSSEEEEE
T ss_pred eccCCCcccccceeEEecCCccEEEEECCCCEEEEEECCCCcEE-----------EEec-CCCCCEEEEEEeCCCEEEEE
Confidence 022456678999999999999999999999999999998755 2222 22355567889999999999
Q ss_pred EcCeeEEEEec
Q psy12614 611 MDDSALCVINK 621 (708)
Q Consensus 611 ~~d~~i~~wd~ 621 (708)
+.|+++++|..
T Consensus 311 ~sdd~~~~~~~ 321 (342)
T d1yfqa_ 311 TSDDTFKTNAA 321 (342)
T ss_dssp EECTHHHHCSS
T ss_pred EcCCcEEEeee
Confidence 99988777754
|
| >d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.94 E-value=4e-25 Score=225.37 Aligned_cols=347 Identities=10% Similarity=-0.041 Sum_probs=227.5
Q ss_pred EEEEEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEE---ecccccccEE
Q psy12614 83 RLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEK---LLDRQQGRIL 159 (708)
Q Consensus 83 ~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~---~~~~~~~~v~ 159 (708)
++++.+.||+|++||+.+++.+.++..|. .+..++|||||++|++++.|+.|++||+.+++..... ...+|.+.+.
T Consensus 34 ~~V~~~~dg~v~vwD~~t~~~~~~l~~g~-~~~~vafSPDGk~l~~~~~d~~v~vwd~~t~~~~~~~~i~~~~~~~~~~~ 112 (426)
T d1hzua2 34 FSVTLRDAGQIALVDGDSKKIVKVIDTGY-AVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVES 112 (426)
T ss_dssp EEEEETTTTEEEEEETTTCSEEEEEECCS-SEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECCSEEEEEEE
T ss_pred EEEEEcCCCEEEEEECCCCcEEEEEeCCC-CeeEEEECCCCCEEEEEeCCCCEEEEEccCCceeEEEEEeCCCCCcceEE
Confidence 45778899999999999999999998774 5899999999999999999999999999988754322 2345667788
Q ss_pred EEEECCCCCEEEEec-CC-eEEEEEcCCCceEEEEEecccC----CCCCceeEEEEEEccCCE--EEEEcCCCcEEEEeC
Q psy12614 160 CTAWHSSGDYLVTGC-AA-AVRVWDIHKGHAIHKMSLDKSS----KFSKNTAVWCVAFCADFT--IITGDSGGFVRFWDG 231 (708)
Q Consensus 160 ~~~~s~d~~~l~~~~-~d-~i~iwd~~~~~~~~~~~~~~~~----~~~~~~~v~~~~~~~~~~--l~~~~~dg~i~~wd~ 231 (708)
+++|+|||++|++++ .+ .+.+||..++..+..+...... .+........+.+++++. +++....+.+.+++.
T Consensus 113 s~~~spDG~~l~v~~~~~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~d~~~~~~~~~~~~~i~~~~~ 192 (426)
T d1hzua2 113 SKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNY 192 (426)
T ss_dssp CCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEEC
T ss_pred eeeecCCCCEEEEeecCCCeEEEEcCCccceeEEeeccCCCccceeecCCCceeEEEECCCCCEEEEecCCCCeEEEEEe
Confidence 889999999986655 55 9999999999988777643210 011234456677777774 344555567777776
Q ss_pred CCCeeE-EEeeccccCeEEEEEeCCCCEEEEEec-CCeEEEEEccCCcccccCCCCCCCCcceEEeEEEe--ccccceEE
Q psy12614 232 KTGVQW-SDVKTHKKDILALTVSEDENYLYCAGV-DPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRV--IHEGDVKS 307 (708)
Q Consensus 232 ~~~~~~-~~~~~~~~~i~~~~~s~~~~~l~~~~~-dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~--~~~~~v~~ 307 (708)
..+..+ .....+...+..+.|+|++++++++.. +..+.+++..+ ++ ...... .+......
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~a~~~~~~~~~~~~~~--------~~--------~~~~~~~~~~~~~~~~ 256 (426)
T d1hzua2 193 KDIDNLTVTSIGAAPFLADGGWDSSHRYFMTAANNSNKVAVIDSKD--------RR--------LSALVDVGKTPHPGRG 256 (426)
T ss_dssp SSSSSCEEEEEECCSSEEEEEECTTSCEEEEEETTCSEEEEEETTT--------TE--------EEEEEECSSCCCCSCC
T ss_pred ccccceeeEEeccCCccEeeeECCCCcEEEeeeecccceeeeeccc--------cc--------EEEEeccCCcccccce
Confidence 655432 233357788899999999999887765 45788999887 43 222221 11111112
Q ss_pred EEEe--CC---EEEEEcCCCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEEEcCCeEEEEEecCCCCCCCCCCCC
Q psy12614 308 LALH--GN---RLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSN 382 (708)
Q Consensus 308 l~~~--~~---~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~ 382 (708)
..+. +. ..++.+.|+.+.+|+........
T Consensus 257 ~~~~~~~~~~~~~~~~~~d~~v~~~~~~~~~~~~---------------------------------------------- 290 (426)
T d1hzua2 257 ANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQ---------------------------------------------- 290 (426)
T ss_dssp EEEEETTTEEEEEEECTTTCEEEEEECCTTTCTT----------------------------------------------
T ss_pred eeeecCCCCceEEeccCCCceEEEeecccccccc----------------------------------------------
Confidence 2221 11 11122334455444443221000
Q ss_pred CCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEEE--------cCCceEEEEEEecCCcceeEEeec---CCcccc
Q psy12614 383 TTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYS--------TESCVRLHSLDLDGDKPQISRIKN---LPAPLF 451 (708)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~--------~d~~i~i~~~~~~~~~~~~~~~~~---~~~~~~ 451 (708)
...+......+|...+..++|+|||++|++. .+++|+|||+.+.+....+..+.. +..+
T Consensus 291 --------~~~~~~~~l~g~~~~v~~v~~sPdg~~l~v~~~~~~s~~~~~tv~vwd~~t~~~~~~~~~~~~~~~~~~~-- 360 (426)
T d1hzua2 291 --------YAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEG-- 360 (426)
T ss_dssp --------TBTSEEEEEECSSSCCCCEECCTTCSEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSS--
T ss_pred --------ccceEeEEEecCCCceeEEEcCCCCceEEEeecCCCCcccCCEEEEEECCCCCcCeEEeccchhcccCCC--
Confidence 0113344455788889999999999999962 278999999987543333322111 2222
Q ss_pred cceeEEEEEecCCCeEEEEe-----cCCc--EEEecCCCeEEEEEecCCCCCccCcceEEEEECCCCcEEE
Q psy12614 452 KSIFTHVLISADSTLLLAVS-----LNGP--LYIIDLSSLEIKYCVDPYKSNLMSDVISLVQMSECKQYIV 515 (708)
Q Consensus 452 ~~~i~~~~~s~d~~~l~~~~-----~dg~--i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~ 515 (708)
...+.+++|||||+++++.. .++. ||+..+. +....+...+ .++|+|+|-+
T Consensus 361 ~~rv~~~~fSpDGk~i~vs~~~~~~~~~~i~v~D~~T~--k~~~~i~~~~-----------~~tp~Gk~~~ 418 (426)
T d1hzua2 361 AKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTL--KLKAVVKDPR-----------LITPTGKFNV 418 (426)
T ss_dssp CCCEEEEEECSSSSEEEEEECCCTTSCCEEEEEETTTT--EEEEEECCTT-----------CCSEEEEEEH
T ss_pred CccEEEEEECCCCCEEEEEEecCCCCCCeEEEEECCCC--eEEEEECCCC-----------ccCCCceEeE
Confidence 34677899999999886543 3444 7776666 6666665321 3467777744
|
| >d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Paracoccus denitrificans [TaxId: 266]
Probab=99.94 E-value=3.4e-25 Score=224.86 Aligned_cols=339 Identities=11% Similarity=-0.024 Sum_probs=246.3
Q ss_pred cCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECCCCeEe--EEE---
Q psy12614 35 EPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMRRLNIK--SST--- 107 (708)
Q Consensus 35 s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~~~~--~~~--- 107 (708)
+++.-++++.+.+|+|.|||..+++.+. .+..+. .+..++|+ |+++++++.|++|.+||+.+++.. ..+
T Consensus 29 ~~~~~~~v~~~d~g~v~v~D~~t~~v~~-~~~~g~---~~~~v~fSpDG~~l~~~s~dg~v~~~d~~t~~~~~~~~i~~~ 104 (432)
T d1qksa2 29 DLENLFSVTLRDAGQIALIDGSTYEIKT-VLDTGY---AVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIG 104 (432)
T ss_dssp CGGGEEEEEETTTTEEEEEETTTCCEEE-EEECSS---CEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECC
T ss_pred CCCcEEEEEEcCCCEEEEEECCCCcEEE-EEeCCC---CeeEEEECCCCCEEEEEcCCCCEEEEEeeCCCceEEEEEecC
Confidence 3333345788999999999999999987 676654 59999999 999999999999999999987643 222
Q ss_pred eecCCceEEEEEecCCCEE-EEEeCCCcEEEEEccCCcEEEEEec---------ccccccEEEEEECCCCCEEEEe-cCC
Q psy12614 108 AVTSGTCWCLSVHKKKRLL-AAGTEQGHINLFQISDEGLLYEKLL---------DRQQGRILCTAWHSSGDYLVTG-CAA 176 (708)
Q Consensus 108 ~~~~~~v~~~~~s~~~~~l-a~~~~d~~i~iwd~~~~~~~~~~~~---------~~~~~~v~~~~~s~d~~~l~~~-~~d 176 (708)
..|.+.+.+.+|+|||++| ++++.++.|++||..+++.+..... ..+......+.++|++..++.+ ..+
T Consensus 105 ~~~~~~~~s~~~SpDG~~l~vs~~~~~~v~i~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~~~vs~~~~ 184 (432)
T d1qksa2 105 SEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKET 184 (432)
T ss_dssp SEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTT
T ss_pred CCCCCeEEecccCCCCCEEEEEcCCCCeEEEEeCccccceeeeccCCccccceeccCCCceeEEEECCCCCEEEEEEccC
Confidence 3566677777889999986 6677899999999999988732221 1234567789999999887654 445
Q ss_pred -eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-E-EEEcCCCcEEEEeCCCCeeEEEeec-----cccCeE
Q psy12614 177 -AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-I-ITGDSGGFVRFWDGKTGVQWSDVKT-----HKKDIL 248 (708)
Q Consensus 177 -~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l-~~~~~dg~i~~wd~~~~~~~~~~~~-----~~~~i~ 248 (708)
.|.+||..+++......... ...+..++|+|||+ + ++...++.+.++|..+++.+..+.. |.....
T Consensus 185 ~~i~~~d~~~~~~~~~~~i~~------g~~~~~~~~spdg~~~~va~~~~~~v~v~d~~~~~~~~~~~~g~~~~~~~~~~ 258 (432)
T d1qksa2 185 GKILLVDYTDLNNLKTTEISA------ERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGA 258 (432)
T ss_dssp TEEEEEETTCSSEEEEEEEEC------CSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCE
T ss_pred CeEEEEEccCCCcceEEEEcc------cCccccceECCCCCEEEEeccccceEEEeecccceEEEEeccCccccccCccc
Confidence 99999999887665444432 45688999999996 4 4455567899999999888776542 334444
Q ss_pred EEEEeCCCCEEEEEe-cCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEEEcCCCeEE
Q psy12614 249 ALTVSEDENYLYCAG-VDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSGGLDSYLS 325 (708)
Q Consensus 249 ~~~~s~~~~~l~~~~-~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~~~d~~i~ 325 (708)
...+...+...++.. .++.+.+|+... .. ...|...+....+. +..+++++.+...+
T Consensus 259 ~~~~~~~g~~~~~~~lg~~~v~~~~~~~--------~~------------~~~~~~~v~~~~~~~~g~~~~~~s~p~~~~ 318 (432)
T d1qksa2 259 NFVHPTFGPVWATSHMGDDSVALIGTDP--------EG------------HPDNAWKILDSFPALGGGSLFIKTHPNSQY 318 (432)
T ss_dssp EEEETTTEEEEEEEBSSSSEEEEEECCT--------TT------------CTTTBTSEEEEEECSCSCCCCEECCTTCSE
T ss_pred ceecCCCCceecccccCCceEEeccccc--------cc------------ccccccEEEEEEEcCCCCeEEEEecCCccc
Confidence 555555554444443 377899998766 21 23456667777776 67889999999999
Q ss_pred EEeCCCCceeecCccCCCCceEEEEcCCcEEEEE-cCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCC
Q psy12614 326 LSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQ-YTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNA 404 (708)
Q Consensus 326 iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~-~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (708)
+|........ ......+++ ||++.++++ .++.+++|++.+.. .+ .++..
T Consensus 319 lw~~~~~~~~-----~~~~~sv~v-pDg~~la~~s~d~~~k~w~~~~~~--------------------~l----~~~~~ 368 (432)
T d1qksa2 319 LYVDATLNPE-----AEISGSVAV-FDIKAMTGDGSDPEFKTLPIAEWA--------------------GI----TEGQP 368 (432)
T ss_dssp EEEECTTCSS-----HHHHTCEEE-EEGGGCCCSSSCCCEEEECHHHHH--------------------TC----CSSCC
T ss_pred eeecccCCCC-----CCeeeEEEE-EechhhcccccCCceEeccccccc--------------------cc----CCCCC
Confidence 9976543210 011234554 999988884 78899999986533 11 14556
Q ss_pred ceEEEEeCCCCcEEEEE------cCCceEEEEEEe
Q psy12614 405 TIRCSVVSNDGKYVAYS------TESCVRLHSLDL 433 (708)
Q Consensus 405 ~i~~~~~s~~g~~l~~~------~d~~i~i~~~~~ 433 (708)
.+.+++|||||++++++ .++.|.|||..+
T Consensus 369 ~v~~~~fS~DG~~v~~S~~~~~~~~g~i~i~D~~T 403 (432)
T d1qksa2 369 RVVQGEFNKDGTEVWFSVWNGKDQESALVVVDDKT 403 (432)
T ss_dssp EEEEEEECTTSSEEEEEEECCTTSCCEEEEEETTT
T ss_pred cEEEeEECCCCCEEEEEEecCCCCCCcEEEEECCC
Confidence 78899999999988763 268899999876
|
| >d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.93 E-value=2.5e-24 Score=219.37 Aligned_cols=320 Identities=9% Similarity=-0.010 Sum_probs=227.0
Q ss_pred EEcCCCC--EEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECCCCeEeEEE-
Q psy12614 33 ACEPKSS--RLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMRRLNIKSST- 107 (708)
Q Consensus 33 ~~s~~~~--~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~~~~~~~- 107 (708)
.++.|.+ ++++++.||+|+|||+.+++.+. .+..|. .+.+++|+ |++|++++.|++|++||+.+++.....
T Consensus 25 ~~~~d~~~~~~V~~~~dg~v~vwD~~t~~~~~-~l~~g~---~~~~vafSPDGk~l~~~~~d~~v~vwd~~t~~~~~~~~ 100 (426)
T d1hzua2 25 LNDLDLPNLFSVTLRDAGQIALVDGDSKKIVK-VIDTGY---AVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAE 100 (426)
T ss_dssp CSCCCGGGEEEEEETTTTEEEEEETTTCSEEE-EEECCS---SEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEE
T ss_pred cccCCCCeEEEEEEcCCCEEEEEECCCCcEEE-EEeCCC---CeeEEEECCCCCEEEEEeCCCCEEEEEccCCceeEEEE
Confidence 3555543 45678889999999999999887 788765 58999999 999999999999999999998754432
Q ss_pred ----eecCCceEEEEEecCCCEEEEE-eCCCcEEEEEccCCcEEEEEeccc-----------ccccEEEEEECCCCCEEE
Q psy12614 108 ----AVTSGTCWCLSVHKKKRLLAAG-TEQGHINLFQISDEGLLYEKLLDR-----------QQGRILCTAWHSSGDYLV 171 (708)
Q Consensus 108 ----~~~~~~v~~~~~s~~~~~la~~-~~d~~i~iwd~~~~~~~~~~~~~~-----------~~~~v~~~~~s~d~~~l~ 171 (708)
.+|.+.+.+++|+|||++|+++ ..++.+++||..++... ..+.. +.+....+.+++++..++
T Consensus 101 i~~~~~~~~~~~s~~~spDG~~l~v~~~~~~~v~i~d~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~s~d~~~~~ 178 (426)
T d1hzua2 101 IKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPK--QIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFI 178 (426)
T ss_dssp EECCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEE--EEEECCEECSSSCCEESCCCEEEEEECSSSSEEE
T ss_pred EeCCCCCcceEEeeeecCCCCEEEEeecCCCeEEEEcCCcccee--EEeeccCCCccceeecCCCceeEEEECCCCCEEE
Confidence 2566677788889999987655 57899999999998876 33332 234556777888888777
Q ss_pred EecCC--eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE--EEEEcCCCcEEEEeCCCCeeEEEeecc--cc
Q psy12614 172 TGCAA--AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT--IITGDSGGFVRFWDGKTGVQWSDVKTH--KK 245 (708)
Q Consensus 172 ~~~~d--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--l~~~~~dg~i~~wd~~~~~~~~~~~~~--~~ 245 (708)
....+ .+.+++..++..+....... ...+..++|+|+++ +++...+..+.+++..+++.+...... ..
T Consensus 179 ~~~~~~~~i~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~g~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (426)
T d1hzua2 179 VNVKETGKVLLVNYKDIDNLTVTSIGA------APFLADGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPH 252 (426)
T ss_dssp EEETTTTEEEEEECSSSSSCEEEEEEC------CSSEEEEEECTTSCEEEEEETTCSEEEEEETTTTEEEEEEECSSCCC
T ss_pred EecCCCCeEEEEEeccccceeeEEecc------CCccEeeeECCCCcEEEeeeecccceeeeecccccEEEEeccCCccc
Confidence 66655 67777776665444333322 66789999999996 455566788999999999887776532 22
Q ss_pred CeEEEEEeCCCCE-EE--EEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEE---
Q psy12614 246 DILALTVSEDENY-LY--CAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYS--- 317 (708)
Q Consensus 246 ~i~~~~~s~~~~~-l~--~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s--- 317 (708)
......+..++.. +. ....|+.+.+|+... ... ....|.....+.+|...+..++++ +.+|++
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~d~~v~~~~~~~--------~~~-~~~~~~~~~~l~g~~~~v~~v~~sPdg~~l~v~~~ 323 (426)
T d1hzua2 253 PGRGANFVHPKYGPVWSTSHLGDGSISLIGTDP--------KNH-PQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTT 323 (426)
T ss_dssp CSCCEEEEETTTEEEEEEECTTTCEEEEEECCT--------TTC-TTTBTSEEEEEECSSSCCCCEECCTTCSEEEECCT
T ss_pred ccceeeeecCCCCceEEeccCCCceEEEeeccc--------ccc-ccccceEeEEEecCCCceeEEEcCCCCceEEEeec
Confidence 2333444443322 22 334578888888765 210 112233677889999999999999 788884
Q ss_pred ----EcCCCeEEEEeCCCCcee-ec---------CccCCCCceEEEEcCCcEEEEE------cCCeEEEEEecCCC
Q psy12614 318 ----GGLDSYLSLSYYPPKTLV-KY---------PCTLAQSTPVSLAKDIQHVLLQ------YTSHLELWSLGSAQ 373 (708)
Q Consensus 318 ----~~~d~~i~iw~~~~~~~~-~~---------~~~~~~~~~~~~s~~~~~l~~~------~~~~i~i~~~~~~~ 373 (708)
++.|++|++||+.+.... ++ .........++|||||+.++++ .++.|.+||..+.+
T Consensus 324 ~~~s~~~~~tv~vwd~~t~~~~~~~~~~~~~~~~~~~~~rv~~~~fSpDGk~i~vs~~~~~~~~~~i~v~D~~T~k 399 (426)
T d1hzua2 324 FNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLK 399 (426)
T ss_dssp TCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCCEEEEEECSSSSEEEEEECCCTTSCCEEEEEETTTTE
T ss_pred CCCCcccCCEEEEEECCCCCcCeEEeccchhcccCCCCccEEEEEECCCCCEEEEEEecCCCCCCeEEEEECCCCe
Confidence 556889999999876521 11 1122233457899999977542 46789999998854
|
| >d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: YVTN repeat domain: Surface layer protein species: Archaeon Methanosarcina mazei [TaxId: 2209]
Probab=99.90 E-value=2.2e-20 Score=180.54 Aligned_cols=259 Identities=10% Similarity=0.128 Sum_probs=200.5
Q ss_pred EEEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEE-EEeCCCcEEEEEccCCcEEEEEecccccccEEEEEE
Q psy12614 85 FSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLA-AGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAW 163 (708)
Q Consensus 85 ~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la-~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~ 163 (708)
++.+.|++|.+||+++++.+.++... ..+..++|+|||++|+ +++.++.|++||+.+++.+ ..+..+. .+..++|
T Consensus 6 V~~~~~~~v~v~D~~t~~~~~~i~~g-~~p~~va~spdG~~l~v~~~~~~~i~v~d~~t~~~~--~~~~~~~-~~~~~~~ 81 (301)
T d1l0qa2 6 IANSESDNISVIDVTSNKVTATIPVG-SNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVI--ATVPAGS-SPQGVAV 81 (301)
T ss_dssp EEETTTTEEEEEETTTTEEEEEEECS-SSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEE--EEEECSS-SEEEEEE
T ss_pred EEECCCCEEEEEECCCCeEEEEEECC-CCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcee--eeeeccc-ccccccc
Confidence 46678999999999999999888754 4578999999999885 5567899999999999887 5555554 4689999
Q ss_pred CCCCCEEEEec-CC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE--EEEEcCCCcEEEEeCCCCeeEEE
Q psy12614 164 HSSGDYLVTGC-AA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT--IITGDSGGFVRFWDGKTGVQWSD 239 (708)
Q Consensus 164 s~d~~~l~~~~-~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--l~~~~~dg~i~~wd~~~~~~~~~ 239 (708)
++++..+++.+ .+ .+.+|+..+++....+.. .....+++|+|++. ++++..++.+.+|+..+++.+..
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (301)
T d1l0qa2 82 SPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKT--------GKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINT 153 (301)
T ss_dssp CTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC--------SSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred ccccccccccccccceeeecccccceeeeeccc--------cccceEEEeecCCCeeeeeeccccceeeeeccccceeee
Confidence 99998776655 45 999999999988887764 45578899999995 56777789999999999998888
Q ss_pred eeccccCeEEEEEeCCCCEEEEEecC-CeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEE
Q psy12614 240 VKTHKKDILALTVSEDENYLYCAGVD-PTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLY 316 (708)
Q Consensus 240 ~~~~~~~i~~~~~s~~~~~l~~~~~d-g~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~ 316 (708)
+.. ...+..++++|+++.+++++.+ +.+.+|+... .+ ..........+..++++ +..++
T Consensus 154 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~---------~~~~~~~~~~~~~~~~~~~g~~~~ 215 (301)
T d1l0qa2 154 VSV-GRSPKGIAVTPDGTKVYVANFDSMSISVIDTVT--------NS---------VIDTVKVEAAPSGIAVNPEGTKAY 215 (301)
T ss_dssp EEC-CSSEEEEEECTTSSEEEEEETTTTEEEEEETTT--------TE---------EEEEEECSSEEEEEEECTTSSEEE
T ss_pred ccc-CCCceEEEeeccccceeeecccccccccccccc--------ee---------eeecccccCCcceeeccccccccc
Confidence 774 4567899999999999888776 5666776665 32 22233334556777887 66665
Q ss_pred EEc---CCCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEE-EE-cCCeEEEEEecCCC
Q psy12614 317 SGG---LDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVL-LQ-YTSHLELWSLGSAQ 373 (708)
Q Consensus 317 s~~---~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~-~~-~~~~i~i~~~~~~~ 373 (708)
.++ .++.|.+||+.+..+.........+..++++|||++++ ++ .++.|.+||+.+++
T Consensus 216 v~~~~~~~~~v~v~D~~t~~~~~~~~~~~~~~~va~spdg~~l~va~~~~~~i~v~D~~t~~ 277 (301)
T d1l0qa2 216 VTNVDKYFNTVSMIDTGTNKITARIPVGPDPAGIAVTPDGKKVYVALSFCNTVSVIDTATNT 277 (301)
T ss_dssp EEEECSSCCEEEEEETTTTEEEEEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTE
T ss_pred cccccceeeeeeeeecCCCeEEEEEcCCCCEEEEEEeCCCCEEEEEECCCCeEEEEECCCCe
Confidence 543 34689999999887544332345567899999999774 44 67899999998865
|
| >d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: YVTN repeat domain: Surface layer protein species: Archaeon Methanosarcina mazei [TaxId: 2209]
Probab=99.89 E-value=2.1e-19 Score=173.60 Aligned_cols=259 Identities=13% Similarity=0.099 Sum_probs=202.2
Q ss_pred EEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEE-EEEcCCCcEEEEECCCCeEeEEEeecCCceEEEE
Q psy12614 42 AVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRL-FSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLS 118 (708)
Q Consensus 42 a~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l-~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~ 118 (708)
++++.|++|.|||+.+++.+. .+... ..+..++|+ |++| ++++.++.|++||+.+++.+..+..+. .+..++
T Consensus 6 V~~~~~~~v~v~D~~t~~~~~-~i~~g---~~p~~va~spdG~~l~v~~~~~~~i~v~d~~t~~~~~~~~~~~-~~~~~~ 80 (301)
T d1l0qa2 6 IANSESDNISVIDVTSNKVTA-TIPVG---SNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGVA 80 (301)
T ss_dssp EEETTTTEEEEEETTTTEEEE-EEECS---SSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEEE
T ss_pred EEECCCCEEEEEECCCCeEEE-EEECC---CCceEEEEeCCCCEEEEEECCCCEEEEEECCCCceeeeeeccc-cccccc
Confidence 456788999999999998776 56543 457899999 7877 466789999999999999999988775 468999
Q ss_pred EecCCCEEEE-EeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEec-CC-eEEEEEcCCCceEEEEEec
Q psy12614 119 VHKKKRLLAA-GTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGC-AA-AVRVWDIHKGHAIHKMSLD 195 (708)
Q Consensus 119 ~s~~~~~la~-~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~-~d-~i~iwd~~~~~~~~~~~~~ 195 (708)
|++++..+++ +..++.+.+|+..+++.. ..+. +.....+++|+|++..++..+ .+ .+.+|+..+++.+..+..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 156 (301)
T d1l0qa2 81 VSPDGKQVYVTNMASSTLSVIDTTSNTVA--GTVK-TGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSV- 156 (301)
T ss_dssp ECTTSSEEEEEETTTTEEEEEETTTTEEE--EEEE-CSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC-
T ss_pred cccccccccccccccceeeecccccceee--eecc-ccccceEEEeecCCCeeeeeeccccceeeeeccccceeeeccc-
Confidence 9999997665 455788999999998876 4444 345678999999999886554 45 899999999988887764
Q ss_pred ccCCCCCceeEEEEEEccCCE-EE-EEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEecC---CeEEE
Q psy12614 196 KSSKFSKNTAVWCVAFCADFT-II-TGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVD---PTVVC 270 (708)
Q Consensus 196 ~~~~~~~~~~v~~~~~~~~~~-l~-~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d---g~i~i 270 (708)
...+..++++|++. ++ +....+.+.+|+....+....+.. ...+..++++++++.++.++.+ +.|++
T Consensus 157 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~v~~~~~~~~~v~v 228 (301)
T d1l0qa2 157 -------GRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKV-EAAPSGIAVNPEGTKAYVTNVDKYFNTVSM 228 (301)
T ss_dssp -------CSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC-SSEEEEEEECTTSSEEEEEEECSSCCEEEE
T ss_pred -------CCCceEEEeeccccceeeecccccccccccccceeeeecccc-cCCcceeeccccccccccccccceeeeeee
Confidence 34578899999984 44 444557788888887777766654 4567889999999988776543 68999
Q ss_pred EEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEE-EEEcCCCeEEEEeCCCCce
Q psy12614 271 FQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRL-YSGGLDSYLSLSYYPPKTL 334 (708)
Q Consensus 271 w~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l-~s~~~d~~i~iw~~~~~~~ 334 (708)
||..+ ++ ....+. +...+.+++|+ |++| ++++.|+.|++||+.+.++
T Consensus 229 ~D~~t--------~~--------~~~~~~-~~~~~~~va~spdg~~l~va~~~~~~i~v~D~~t~~~ 278 (301)
T d1l0qa2 229 IDTGT--------NK--------ITARIP-VGPDPAGIAVTPDGKKVYVALSFCNTVSVIDTATNTI 278 (301)
T ss_dssp EETTT--------TE--------EEEEEE-CCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEE
T ss_pred eecCC--------Ce--------EEEEEc-CCCCEEEEEEeCCCCEEEEEECCCCeEEEEECCCCeE
Confidence 99988 64 333333 34568999999 6766 6788899999999988763
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Probab=99.87 E-value=3.9e-21 Score=190.01 Aligned_cols=310 Identities=10% Similarity=-0.037 Sum_probs=210.5
Q ss_pred EEEe--CCEEEEEcCCCcEEEEECCCCeEeEEEe-ecCCceEEEEEecCCCEEEE-EeCCCcEEEEEccCCcEEEEEecc
Q psy12614 77 LTWF--NDRLFSGGLQGFVNEYDMRRLNIKSSTA-VTSGTCWCLSVHKKKRLLAA-GTEQGHINLFQISDEGLLYEKLLD 152 (708)
Q Consensus 77 l~~~--~~~l~s~~~d~~i~vwd~~~~~~~~~~~-~~~~~v~~~~~s~~~~~la~-~~~d~~i~iwd~~~~~~~~~~~~~ 152 (708)
++|+ +++|++++.+++|.+||+.+++.+.++. .+...+.+++|+|||+++++ +..++.|++||+.+++........
T Consensus 2 ~a~~~~~~~l~~~~~~~~v~v~D~~t~~~~~t~~~~~~~~p~~l~~spDG~~l~v~~~~~~~v~~~d~~t~~~~~~~~~~ 81 (346)
T d1jmxb_ 2 PALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLS 81 (346)
T ss_dssp CCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESC
T ss_pred ccCCCCCcEEEEEcCCCEEEEEECCCCCEEEEEEcCCCCCcceEEECCCCCEEEEEECCCCcEEEEeCccCeeeeeeccc
Confidence 3566 7899999999999999999999999987 45667899999999998754 557899999999999887433322
Q ss_pred cc----cccEEEEEECCCCCEEEEec------------CC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCC
Q psy12614 153 RQ----QGRILCTAWHSSGDYLVTGC------------AA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADF 215 (708)
Q Consensus 153 ~~----~~~v~~~~~s~d~~~l~~~~------------~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 215 (708)
.. ...+..++|+|||+++++++ .+ .+.+|+..+++....+.... ....+..+.+++++
T Consensus 82 ~~~~~~~~~~~~v~~s~DG~~l~v~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~ 156 (346)
T d1jmxb_ 82 SVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP-----MPRQVYLMRAADDG 156 (346)
T ss_dssp CSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE-----CCSSCCCEEECTTS
T ss_pred ccccccCCceEEEEEecCCCEEEEEecCCcceeeeeccCcceEEEEecccceeeeEEEeee-----ccCceEEEEecCCC
Confidence 21 12456789999999998765 34 68889888877654443321 13345566778888
Q ss_pred EEEEEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEec-CCeEEEEEccCCcccccCCCCCCCCcceEE
Q psy12614 216 TIITGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGV-DPTVVCFQRTRKPQVCSTSGPEQGSSVWVR 294 (708)
Q Consensus 216 ~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~-dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~ 294 (708)
++++.+ +.+.+|+..+++.+..+..+ .....+.++|++..++.... ++.+.+++... ..
T Consensus 157 ~~~~~~--~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~--------- 216 (346)
T d1jmxb_ 157 SLYVAG--PDIYKMDVKTGKYTVALPLR-NWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIA--------RF--------- 216 (346)
T ss_dssp CEEEES--SSEEEECTTTCCEEEEECST-TCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEE--------EC---------
T ss_pred EEEEeC--CcceEEEccCCCEEEEEecC-CCccceEEeccccEEEEEecCCCceEeeeeee--------ee---------
Confidence 766654 56899999999988887754 44556677888766544333 34444443322 00
Q ss_pred eEEEeccccceEEEEEeCCEEEEEcCCCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEEEcCCeEEEEEecCCCC
Q psy12614 295 SVNRVIHEGDVKSLALHGNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQS 374 (708)
Q Consensus 295 ~~~~~~~~~~v~~l~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~ 374 (708)
. .....+.++..+..+.+|+ ..++.
T Consensus 217 -~-------------~~~~~~~~~~~~~~~~~~~----------------------------------------~~~~~- 241 (346)
T d1jmxb_ 217 -K-------------DDKQDPATADLLYGYLSVD----------------------------------------LKTGK- 241 (346)
T ss_dssp ---------------------CCCEEEEEEEEEE----------------------------------------TTTCC-
T ss_pred -c-------------cCceeEeeccCCceEEEEE----------------------------------------CCCCc-
Confidence 0 0011122222333444444 44333
Q ss_pred CCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEEEcCCceEEEEEEecCCcceeEEeecCCcccccce
Q psy12614 375 TDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYSTESCVRLHSLDLDGDKPQISRIKNLPAPLFKSI 454 (708)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 454 (708)
........+...+..+.+++++.+++...++.+.+||..+ .+ .+..+. . ...
T Consensus 242 -------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~d~~~--~~-~~~~~~-~-----~~~ 293 (346)
T d1jmxb_ 242 -------------------THTQEFADLTELYFTGLRSPKDPNQIYGVLNRLAKYDLKQ--RK-LIKAAN-L-----DHT 293 (346)
T ss_dssp -------------------EEEEEEEECSSCEEEEEECSSCTTEEEEEESEEEEEETTT--TE-EEEEEE-C-----SSC
T ss_pred -------------------eEEEEeecccceeEEEEEeCCCCEEEEecCCeEEEEECCC--Cc-EEEEEc-C-----CCC
Confidence 3333444566778888999999999887778899999875 32 222211 1 124
Q ss_pred eEEEEEecCCCeEEEEecCCc--EEEecCCCeEEEEEecCCCCC
Q psy12614 455 FTHVLISADSTLLLAVSLNGP--LYIIDLSSLEIKYCVDPYKSN 496 (708)
Q Consensus 455 i~~~~~s~d~~~l~~~~~dg~--i~~~~~~~~~~~~~~~~~~~~ 496 (708)
+.+++|||||++|++++.++. +|+..+. +.+..++.+.++
T Consensus 294 ~~~va~s~DG~~l~v~~~d~~v~v~D~~t~--~~i~~i~~p~g~ 335 (346)
T d1jmxb_ 294 YYCVAFDKKGDKLYLGGTFNDLAVFNPDTL--EKVKNIKLPGGD 335 (346)
T ss_dssp CCEEEECSSSSCEEEESBSSEEEEEETTTT--EEEEEEECSSSC
T ss_pred EEEEEEcCCCCEEEEEeCCCcEEEEECccC--CEEEEEECCCCC
Confidence 556999999999999999988 7777666 888888876665
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.87 E-value=1.2e-19 Score=178.33 Aligned_cols=271 Identities=11% Similarity=0.030 Sum_probs=201.1
Q ss_pred CEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEE-EEEcCCCcEEEEECCCCeEeEEEeecCC---
Q psy12614 39 SRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRL-FSGGLQGFVNEYDMRRLNIKSSTAVTSG--- 112 (708)
Q Consensus 39 ~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l-~s~~~d~~i~vwd~~~~~~~~~~~~~~~--- 112 (708)
+|+++++.|++|.|||+.+++.+. .+..+.....+.+++|+ |+++ ++++.++.|.+||+.+++.+..+..+..
T Consensus 2 ~~~vt~~~d~~v~v~D~~s~~~~~-~i~~~~~~~~~~~i~~spDg~~l~v~~~~~~~v~v~D~~t~~~~~~~~~~~~~~~ 80 (337)
T d1pbyb_ 2 DYILAPARPDKLVVIDTEKMAVDK-VITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEER 80 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEE-EEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEE
T ss_pred eEEEEEcCCCEEEEEECCCCeEEE-EEECCCCCCCccEEEECCCCCEEEEEECCCCeEEEEECCCCcEEEEEecCCCccc
Confidence 589999999999999999998876 66554323668899999 7777 4667899999999999999988876543
Q ss_pred --ceEEEEEecCCCEEEEEe------------CCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCCeE
Q psy12614 113 --TCWCLSVHKKKRLLAAGT------------EQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAAAV 178 (708)
Q Consensus 113 --~v~~~~~s~~~~~la~~~------------~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~i 178 (708)
.+..++|+||+++++++. .+..+.+||..+++.. ..+. +...+..++|+|||+++++++.+ +
T Consensus 81 ~~~~~~v~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~--~~~~-~~~~~~~~~~s~dg~~l~~~~~~-~ 156 (337)
T d1pbyb_ 81 VKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRR--KAFE-APRQITMLAWARDGSKLYGLGRD-L 156 (337)
T ss_dssp EECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEE--EEEE-CCSSCCCEEECTTSSCEEEESSS-E
T ss_pred ccceeeEEEcCCCcEEEEeecCCcceeeeccccccceeeccccCCeEE--Eecc-ccCCceEEEEcCCCCEEEEEcCC-c
Confidence 345799999999998775 3577899999998876 3443 34557889999999999998765 6
Q ss_pred EEEEcCCCceEEEEEecccCCC----------------CCceeEEEEEEccCC-EEEEEcCCCcEEEEeCCCCeeEEE-e
Q psy12614 179 RVWDIHKGHAIHKMSLDKSSKF----------------SKNTAVWCVAFCADF-TIITGDSGGFVRFWDGKTGVQWSD-V 240 (708)
Q Consensus 179 ~iwd~~~~~~~~~~~~~~~~~~----------------~~~~~v~~~~~~~~~-~l~~~~~dg~i~~wd~~~~~~~~~-~ 240 (708)
.+||..+++....+........ .............+. ....+..++.+.+|+..++..... +
T Consensus 157 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (337)
T d1pbyb_ 157 HVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREV 236 (337)
T ss_dssp EEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEE
T ss_pred ceeeeecCcEEEEeecCCccccceecCCcceeeccccccceeeeeeeeeeeccceeeecccCccEEEEEcCCCcEEEEEe
Confidence 6799999998887765421110 000001111111111 122223345699999998876543 4
Q ss_pred eccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEEE
Q psy12614 241 KTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSG 318 (708)
Q Consensus 241 ~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~ 318 (708)
..+...+..+.++|++.+++.+ ++.+++||+.+ ++ .... ..+...+.+++|+ |++|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~--~~~i~v~d~~~--------~~--------~~~~-~~~~~~~~~~~~s~dG~~l~v~ 297 (337)
T d1pbyb_ 237 RIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEK--------NA--------SIKR-VPLPHSYYSVNVSTDGSTVWLG 297 (337)
T ss_dssp EECSSCEEEEEECTTSSEEEEE--ESEEEEEETTT--------TE--------EEEE-EECSSCCCEEEECTTSCEEEEE
T ss_pred cCCCcceEEEEecccceEEEEc--cccEEEEECCC--------Cc--------EEEE-EcCCCCEEEEEECCCCCEEEEE
Confidence 5577788899999999988766 48999999998 64 3333 3456778999999 8999999
Q ss_pred cCCCeEEEEeCCCCc
Q psy12614 319 GLDSYLSLSYYPPKT 333 (708)
Q Consensus 319 ~~d~~i~iw~~~~~~ 333 (708)
+.|+.|++||..+.+
T Consensus 298 ~~~~~i~v~D~~t~~ 312 (337)
T d1pbyb_ 298 GALGDLAAYDAETLE 312 (337)
T ss_dssp SBSSEEEEEETTTCC
T ss_pred eCCCcEEEEECCCCc
Confidence 999999999998865
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.86 E-value=1.4e-19 Score=177.97 Aligned_cols=264 Identities=11% Similarity=0.039 Sum_probs=191.5
Q ss_pred CEEEEEcCCCcEEEEECCCCeEeEEEeec--CCceEEEEEecCCCEEE-EEeCCCcEEEEEccCCcEEEEEeccc---cc
Q psy12614 82 DRLFSGGLQGFVNEYDMRRLNIKSSTAVT--SGTCWCLSVHKKKRLLA-AGTEQGHINLFQISDEGLLYEKLLDR---QQ 155 (708)
Q Consensus 82 ~~l~s~~~d~~i~vwd~~~~~~~~~~~~~--~~~v~~~~~s~~~~~la-~~~~d~~i~iwd~~~~~~~~~~~~~~---~~ 155 (708)
+++++++.|++|.+||+++++.+..+..+ ...+.+++|+|||++++ +++.++.|.+||+.+++.+....... +.
T Consensus 2 ~~~vt~~~d~~v~v~D~~s~~~~~~i~~~~~~~~~~~i~~spDg~~l~v~~~~~~~v~v~D~~t~~~~~~~~~~~~~~~~ 81 (337)
T d1pbyb_ 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERV 81 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEE
T ss_pred eEEEEEcCCCEEEEEECCCCeEEEEEECCCCCCCccEEEECCCCCEEEEEECCCCeEEEEECCCCcEEEEEecCCCcccc
Confidence 58999999999999999999999988753 45678999999999875 56678999999999999873322221 12
Q ss_pred ccEEEEEECCCCCEEEEecC------------C-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEc
Q psy12614 156 GRILCTAWHSSGDYLVTGCA------------A-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGD 221 (708)
Q Consensus 156 ~~v~~~~~s~d~~~l~~~~~------------d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~ 221 (708)
..+..++|+||++++++++. + .+.+||..+++....+.. ...+..++|+|||+ +++++
T Consensus 82 ~~~~~v~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--------~~~~~~~~~s~dg~~l~~~~ 153 (337)
T d1pbyb_ 82 KSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA--------PRQITMLAWARDGSKLYGLG 153 (337)
T ss_dssp ECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC--------CSSCCCEEECTTSSCEEEES
T ss_pred cceeeEEEcCCCcEEEEeecCCcceeeeccccccceeeccccCCeEEEeccc--------cCCceEEEEcCCCCEEEEEc
Confidence 34457899999999987753 4 688999999998888764 34567899999996 66665
Q ss_pred CCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCE------------------------EEEEecCCeEEEEEccCCc
Q psy12614 222 SGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENY------------------------LYCAGVDPTVVCFQRTRKP 277 (708)
Q Consensus 222 ~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~------------------------l~~~~~dg~i~iw~~~~~~ 277 (708)
+.+.+||..+++....+..+... ....+++++.. ...+..++.+.+|+..+
T Consensus 154 --~~~~~~d~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 228 (337)
T d1pbyb_ 154 --RDLHVMDPEAGTLVEDKPIQSWE-AETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLET-- 228 (337)
T ss_dssp --SSEEEEETTTTEEEEEECSTTTT-TTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTT--
T ss_pred --CCcceeeeecCcEEEEeecCCcc-ccceecCCcceeeccccccceeeeeeeeeeeccceeeecccCccEEEEEcCC--
Confidence 45788999999888776543221 11222222211 11122334677888777
Q ss_pred ccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEEEcCCCeEEEEeCCCCceeecCccCCCCceEEEEcCCcE
Q psy12614 278 QVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQH 355 (708)
Q Consensus 278 ~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~ 355 (708)
+. ........+...+..+.++ +.+++.+ ++.+++||+.+..............+++|+|||++
T Consensus 229 ------~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~v~d~~~~~~~~~~~~~~~~~~~~~s~dG~~ 293 (337)
T d1pbyb_ 229 ------GE-------MAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPLPHSYYSVNVSTDGST 293 (337)
T ss_dssp ------CC-------EEEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEECSSCCCEEEECTTSCE
T ss_pred ------Cc-------EEEEEecCCCcceEEEEecccceEEEEc--cccEEEEECCCCcEEEEEcCCCCEEEEEECCCCCE
Confidence 53 1233445566677777777 4555443 68999999999885444434556788999999999
Q ss_pred EEEE-cCCeEEEEEecCCC
Q psy12614 356 VLLQ-YTSHLELWSLGSAQ 373 (708)
Q Consensus 356 l~~~-~~~~i~i~~~~~~~ 373 (708)
++++ .++.|.+||..+.+
T Consensus 294 l~v~~~~~~i~v~D~~t~~ 312 (337)
T d1pbyb_ 294 VWLGGALGDLAAYDAETLE 312 (337)
T ss_dssp EEEESBSSEEEEEETTTCC
T ss_pred EEEEeCCCcEEEEECCCCc
Confidence 8876 78999999999866
|
| >d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]
Probab=99.85 E-value=8.1e-18 Score=167.81 Aligned_cols=303 Identities=10% Similarity=-0.066 Sum_probs=217.2
Q ss_pred cCCCCcEEEEEEcCCCCEEEEE-----eCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEc-------
Q psy12614 23 APEPKVINCIACEPKSSRLAVS-----RADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGG------- 88 (708)
Q Consensus 23 ~~h~~~v~~~~~s~~~~~la~~-----~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~------- 88 (708)
..+.+++.+++++|||+++++. +..+.|.+||..+++.+. .+.++. .+ .++|+ |++|++++
T Consensus 17 ~~~~~p~~~~a~spdg~~~~~~~~~~~~~~~~v~v~D~~tg~~~~-~~~~~~--~~--~~a~SpDG~~l~va~~~~~~~~ 91 (373)
T d2madh_ 17 GAADGPTNDEAPGADGRRSYINLPAHHSAIIQQWVLDAGSGSILG-HVNGGF--LP--NPVAAHSGSEFALASTSFSRIA 91 (373)
T ss_pred ccCCCCccccccCCCCCEEEEEcccccCCCceEEEEECCCCCEEE-EEeCCC--Cc--cEEEcCCCCEEEEEeecCCccc
Confidence 4678899999999999998774 234579999999999887 677665 33 68899 88888774
Q ss_pred ---CCCcEEEEECCCCeEeEEEeecCCce-------EEEEEecCCCEEEEEe--CCCcEEEEEccCCcEEEEEecccccc
Q psy12614 89 ---LQGFVNEYDMRRLNIKSSTAVTSGTC-------WCLSVHKKKRLLAAGT--EQGHINLFQISDEGLLYEKLLDRQQG 156 (708)
Q Consensus 89 ---~d~~i~vwd~~~~~~~~~~~~~~~~v-------~~~~~s~~~~~la~~~--~d~~i~iwd~~~~~~~~~~~~~~~~~ 156 (708)
.++.|.+||..+++.+..+..+.... ..+.|+++++.+++.. .++.+.+|+....+.. . +..
T Consensus 92 ~~~~~~~v~v~D~~t~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~~~~~--~----~~~ 165 (373)
T d2madh_ 92 KGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVVQGGSSDD--Q----LLS 165 (373)
T ss_pred ccccceEEEEEECCCCcEEEEEecCCcceeEeccCCCcEEEEeCCCcEEEEEEcCCCceEEeeccCCeEE--E----Eec
Confidence 46789999999999988887665543 4578999999776654 4567889998877654 2 223
Q ss_pred cEEEEEECCCCCEE-EEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEEEEcCCCcEEEEeCCCC
Q psy12614 157 RILCTAWHSSGDYL-VTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTG 234 (708)
Q Consensus 157 ~v~~~~~s~d~~~l-~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~wd~~~~ 234 (708)
...++.|+|+++.+ ++.+.| .+.+|+..+++............ ........+.+.+++.++..+.++.+.+|+...+
T Consensus 166 ~~~~~~~s~~g~~~~v~~~~dg~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 244 (373)
T d2madh_ 166 SPTCYHIHPGAPSTFYLLCAQGGLAKTDHAGGAAGAGLVGAMLTA-AQNLLTQPAQANKSGRIVWPVYSGKILQADISAA 244 (373)
T ss_pred cceeEEEecCCCcEEEEEcCCCeEEEEEcCCceeeEEEeeecccc-CccceeeeEEECCCceEEEecCCceEEEEEcCCC
Confidence 45788999999766 567777 99999999888776665432111 1233345566777777888888999999998877
Q ss_pred eeE--EEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEeC
Q psy12614 235 VQW--SDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALHG 312 (708)
Q Consensus 235 ~~~--~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~~ 312 (708)
... .....+........+.|.....+..+.|+....+-... +
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~------------------------------------~ 288 (373)
T d2madh_ 245 GATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSE------------------------------------Q 288 (373)
T ss_pred eEEEEEeeccccCcEEeeeeccCcceeeEEecCCCeEEEecCC------------------------------------C
Confidence 543 33344455556666666665566565555433332222 3
Q ss_pred CEEEEEcCCCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEE--EE-EcCCeEEEEEecCCC
Q psy12614 313 NRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHV--LL-QYTSHLELWSLGSAQ 373 (708)
Q Consensus 313 ~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l--~~-~~~~~i~i~~~~~~~ 373 (708)
..+++...++.+.+||..++..............++|+|||+.+ ++ +.++.|++||..+++
T Consensus 289 ~~~~~~~~~~~v~~~d~~t~~~~~~~~~~~~~~~~a~spDG~~~l~vt~~~d~~v~v~D~~tg~ 352 (373)
T d2madh_ 289 SAWKLHAAAKEVTSVTGLVGQTSSQISLGHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGD 352 (373)
T ss_pred ceEEeecCCCeEEEEECCCCcEEEEecCCCCeeEEEECCCCCEEEEEEeCCCCeEEEEECCCCC
Confidence 34566777889999999888744443355667789999999853 33 478899999999877
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Probab=99.85 E-value=3.3e-20 Score=183.28 Aligned_cols=296 Identities=10% Similarity=0.006 Sum_probs=209.5
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEe-cCCCCCcEEEEEEe--CCEE-EEEcCCCcEEEEECCCCeEeEEE
Q psy12614 32 IACEPKSSRLAVSRADQSIEIWDISETPHVDRVFI-GDPLSNSIECLTWF--NDRL-FSGGLQGFVNEYDMRRLNIKSST 107 (708)
Q Consensus 32 ~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~-~h~~~~~v~~l~~~--~~~l-~s~~~d~~i~vwd~~~~~~~~~~ 107 (708)
++|++++++|++++.+++|.|||+.+++.+. .+. .|. ..+.+++|+ |+++ +++..++.|.+||+.+++.+..+
T Consensus 2 ~a~~~~~~~l~~~~~~~~v~v~D~~t~~~~~-t~~~~~~--~~p~~l~~spDG~~l~v~~~~~~~v~~~d~~t~~~~~~~ 78 (346)
T d1jmxb_ 2 PALKAGHEYMIVTNYPNNLHVVDVASDTVYK-SCVMPDK--FGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHA 78 (346)
T ss_dssp CCCCTTCEEEEEEETTTEEEEEETTTTEEEE-EEECSSC--CSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred ccCCCCCcEEEEEcCCCEEEEEECCCCCEEE-EEEcCCC--CCcceEEECCCCCEEEEEECCCCcEEEEeCccCeeeeee
Confidence 5789999999999999999999999998876 555 455 678899999 7776 55668999999999999988877
Q ss_pred eecC------CceEEEEEecCCCEEEEEe------------CCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCE
Q psy12614 108 AVTS------GTCWCLSVHKKKRLLAAGT------------EQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDY 169 (708)
Q Consensus 108 ~~~~------~~v~~~~~s~~~~~la~~~------------~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~ 169 (708)
.... ..+..++|+|||+++++++ .++.+.+|+..+++.............+..+.+++++..
T Consensus 79 ~~~~~~~~~~~~~~~v~~s~DG~~l~v~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (346)
T d1jmxb_ 79 NLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSL 158 (346)
T ss_dssp ESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSCE
T ss_pred cccccccccCCceEEEEEecCCCEEEEEecCCcceeeeeccCcceEEEEecccceeeeEEEeeeccCceEEEEecCCCEE
Confidence 6332 2356799999999988765 467789999887765411111112345666778888876
Q ss_pred EEEecCCeEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE--EEEEcCCCcEEEEeCCCCeeEEEeeccccCe
Q psy12614 170 LVTGCAAAVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT--IITGDSGGFVRFWDGKTGVQWSDVKTHKKDI 247 (708)
Q Consensus 170 l~~~~~d~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~i 247 (708)
++++ ..+.+|++.+++.+..+... .....+.++|++. ++....++.+.+++.
T Consensus 159 ~~~~--~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------- 212 (346)
T d1jmxb_ 159 YVAG--PDIYKMDVKTGKYTVALPLR--------NWNRKGYSAPDVLYFWPHQSPRHEFSMLYT---------------- 212 (346)
T ss_dssp EEES--SSEEEECTTTCCEEEEECST--------TCCCTTBCCCBCCCCCCCCCTTCEEEEEEE----------------
T ss_pred EEeC--CcceEEEccCCCEEEEEecC--------CCccceEEeccccEEEEEecCCCceEeeee----------------
Confidence 6543 36889999999988877543 3345566778774 333344444444432
Q ss_pred EEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEEEcCCCeEE
Q psy12614 248 LALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSGGLDSYLS 325 (708)
Q Consensus 248 ~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~~~d~~i~ 325 (708)
...+.+....++++..++.+.+|+..+ +. ........|...+..+.++ +..++... ++.+.
T Consensus 213 -~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~ 275 (346)
T d1jmxb_ 213 -IARFKDDKQDPATADLLYGYLSVDLKT--------GK-------THTQEFADLTELYFTGLRSPKDPNQIYGV-LNRLA 275 (346)
T ss_dssp -EEEC-------CCCEEEEEEEEEETTT--------CC-------EEEEEEEECSSCEEEEEECSSCTTEEEEE-ESEEE
T ss_pred -eeeeccCceeEeeccCCceEEEEECCC--------Cc-------eEEEEeecccceeEEEEEeCCCCEEEEec-CCeEE
Confidence 112233444556666678899999988 54 2334456677788888877 55555544 46899
Q ss_pred EEeCCCCceeecCccCCCCceEEEEcCCcEEEEE-cCCeEEEEEecCCC
Q psy12614 326 LSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQ-YTSHLELWSLGSAQ 373 (708)
Q Consensus 326 iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~-~~~~i~i~~~~~~~ 373 (708)
+||..+...............++++|||++++++ .++.|.+||..+.+
T Consensus 276 v~d~~~~~~~~~~~~~~~~~~va~s~DG~~l~v~~~d~~v~v~D~~t~~ 324 (346)
T d1jmxb_ 276 KYDLKQRKLIKAANLDHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLE 324 (346)
T ss_dssp EEETTTTEEEEEEECSSCCCEEEECSSSSCEEEESBSSEEEEEETTTTE
T ss_pred EEECCCCcEEEEEcCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECccCC
Confidence 9999988754443244567899999999999885 78999999999866
|
| >d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]
Probab=99.83 E-value=1.2e-17 Score=166.66 Aligned_cols=325 Identities=8% Similarity=-0.065 Sum_probs=204.0
Q ss_pred cccccccEEEEEECCCCCEEEEec-----CC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEE---
Q psy12614 151 LDRQQGRILCTAWHSSGDYLVTGC-----AA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITG--- 220 (708)
Q Consensus 151 ~~~~~~~v~~~~~s~d~~~l~~~~-----~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~--- 220 (708)
...+.+++..++++|||+.++... .. .|.+||..+++.+..+..+ . ...++|+|||+ ++++
T Consensus 16 ~~~~~~p~~~~a~spdg~~~~~~~~~~~~~~~~v~v~D~~tg~~~~~~~~~-------~--~~~~a~SpDG~~l~va~~~ 86 (373)
T d2madh_ 16 AGAADGPTNDEAPGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGG-------F--LPNPVAAHSGSEFALASTS 86 (373)
T ss_pred cccCCCCccccccCCCCCEEEEEcccccCCCceEEEEECCCCCEEEEEeCC-------C--CccEEEcCCCCEEEEEeec
Confidence 345678899999999999987653 23 6999999999999987643 2 23689999996 5544
Q ss_pred -------cCCCcEEEEeCCCCeeEEEeeccccCe-------EEEEEeCCCCEEEEEe--cCCeEEEEEccCCcccccCCC
Q psy12614 221 -------DSGGFVRFWDGKTGVQWSDVKTHKKDI-------LALTVSEDENYLYCAG--VDPTVVCFQRTRKPQVCSTSG 284 (708)
Q Consensus 221 -------~~dg~i~~wd~~~~~~~~~~~~~~~~i-------~~~~~s~~~~~l~~~~--~dg~i~iw~~~~~~~~~~~~g 284 (708)
..++.|.+||..+++.+..+..+.... ..+.|+++++.++... .++.+.+|+... +
T Consensus 87 ~~~~~~~~~~~~v~v~D~~t~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~--------~ 158 (373)
T d2madh_ 87 FSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVVQGG--------S 158 (373)
T ss_pred CCcccccccceEEEEEECCCCcEEEEEecCCcceeEeccCCCcEEEEeCCCcEEEEEEcCCCceEEeeccC--------C
Confidence 345789999999999988876655443 4467888887665544 345677777766 3
Q ss_pred CCCCCcceEEeEEEeccccceEEEEEe--C-CEEEEEcCCCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEEEcC
Q psy12614 285 PEQGSSVWVRSVNRVIHEGDVKSLALH--G-NRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYT 361 (708)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~v~~l~~~--~-~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~ 361 (708)
+ ...+.....++.++ + ..+++.+.|+.+.+|+..........
T Consensus 159 ~------------~~~~~~~~~~~~~s~~g~~~~v~~~~dg~~~~~~~~~~~~~~~~----------------------- 203 (373)
T d2madh_ 159 S------------DDQLLSSPTCYHIHPGAPSTFYLLCAQGGLAKTDHAGGAAGAGL----------------------- 203 (373)
T ss_pred e------------EEEEeccceeEEEecCCCcEEEEEcCCCeEEEEEcCCceeeEEE-----------------------
Confidence 2 12222334455555 3 34566777777777776554322111
Q ss_pred CeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEEEcCCceEEEEEEecCCcceeE
Q psy12614 362 SHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYSTESCVRLHSLDLDGDKPQIS 441 (708)
Q Consensus 362 ~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~d~~i~i~~~~~~~~~~~~~ 441 (708)
.................+++++.+++.+.++.+.+|+.... .....
T Consensus 204 --------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~~ 249 (373)
T d2madh_ 204 --------------------------------VGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAA--GATNK 249 (373)
T ss_pred --------------------------------eeeccccCccceeeeEEECCCceEEEecCCceEEEEEcCCC--eEEEE
Confidence 00000001122234556777887777788889999887752 21111
Q ss_pred EeecCCcccccceeEEEEEecCCCeEEEEecCCcEEEecCCCeEEEEEecCCCCCccCcceEEEEECCCCcEEEEEecCC
Q psy12614 442 RIKNLPAPLFKSIFTHVLISADSTLLLAVSLNGPLYIIDLSSLEIKYCVDPYKSNLMSDVISLVQMSECKQYIVCADRKS 521 (708)
Q Consensus 442 ~~~~~~~~~~~~~i~~~~~s~d~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~ 521 (708)
........ ......+.|.+...+..+.++. ....+.+++..+++...++
T Consensus 250 --~~~~~~~~--~~~~~~~~~~~~~~~~~~~d~~---------------------------~~~~~~~~~~~~~~~~~~~ 298 (373)
T d2madh_ 250 --APIDALSG--GRKADTWRPGGWQQVAYLKSSD---------------------------GIYLLTSEQSAWKLHAAAK 298 (373)
T ss_pred --EeeccccC--cEEeeeeccCcceeeEEecCCC---------------------------eEEEecCCCceEEeecCCC
Confidence 11111111 2222444444444443333333 1122333556667777888
Q ss_pred eEEEEECCceee-ecCCCCCCceEEEEcCCCCE--EEEEecCCcEEEEEcCCCCCCchhhhhhccCchhhhcCCCCeeEE
Q psy12614 522 HVVIWKNGQHHA-SLPRYRKPSTAMAIHPTLST--LVTVYSDHRIVEFDLNRKAFTTFSRKLETNHPNEWLSRQLPVLGI 598 (708)
Q Consensus 522 ~i~iw~~~~~~~-~~~~~~~~v~~l~~s~d~~~--l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l 598 (708)
.+.+||..+... ....+...+..++|+|||+. +++++.|+.|++||+.+++.. ..+..+......|
T Consensus 299 ~v~~~d~~t~~~~~~~~~~~~~~~~a~spDG~~~l~vt~~~d~~v~v~D~~tg~~~-----------~~~~~~g~~P~~l 367 (373)
T d2madh_ 299 EVTSVTGLVGQTSSQISLGHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQD-----------QSTVELGSGPQVL 367 (373)
T ss_pred eEEEEECCCCcEEEEecCCCCeeEEEECCCCCEEEEEEeCCCCeEEEEECCCCCEE-----------EEECCCCCCCcEE
Confidence 999999984433 33346678999999999985 457788999999999999876 4555566666666
Q ss_pred EeCCC
Q psy12614 599 EFDPQ 603 (708)
Q Consensus 599 ~~s~~ 603 (708)
++.++
T Consensus 368 ~~~~~ 372 (373)
T d2madh_ 368 SVMNE 372 (373)
T ss_pred EEecC
Confidence 66543
|
| >d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Putative isomerase YbhE family: Putative isomerase YbhE domain: Putative isomerase YbhE species: Escherichia coli [TaxId: 562]
Probab=99.83 E-value=1.3e-17 Score=163.49 Aligned_cols=287 Identities=10% Similarity=0.109 Sum_probs=187.5
Q ss_pred EEEEEcCCCcEEEEECCCCeEeE--EEeecCCceEEEEEecCCCEEEEEe-CCCcEEEEEccCCcEEEE-EecccccccE
Q psy12614 83 RLFSGGLQGFVNEYDMRRLNIKS--STAVTSGTCWCLSVHKKKRLLAAGT-EQGHINLFQISDEGLLYE-KLLDRQQGRI 158 (708)
Q Consensus 83 ~l~s~~~d~~i~vwd~~~~~~~~--~~~~~~~~v~~~~~s~~~~~la~~~-~d~~i~iwd~~~~~~~~~-~~~~~~~~~v 158 (708)
.+++++.|++|++|++++...+. ....|.+.+..|+|+|||++|++++ .|+.|++|++........ .....+...+
T Consensus 6 v~v~~~~~~~I~v~~~~~~~~l~~~~~~~~~~~v~~la~spDG~~L~v~~~~d~~i~~~~i~~~~~~~~~~~~~~~~~~p 85 (333)
T d1ri6a_ 6 VYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSL 85 (333)
T ss_dssp EEEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSSCC
T ss_pred EEEECCCCCcEEEEEEcCCCCeEEEEEEcCCCCEeEEEEeCCCCEEEEEECCCCeEEEEEEeCCCCcEEEeeecccCCCc
Confidence 34777899999999997654333 3336788999999999999996655 489999999986543211 1222334557
Q ss_pred EEEEECCCCCEEEEecCC--eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EE-EEcCCCcEEEEeCCCC
Q psy12614 159 LCTAWHSSGDYLVTGCAA--AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-II-TGDSGGFVRFWDGKTG 234 (708)
Q Consensus 159 ~~~~~s~d~~~l~~~~~d--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~-~~~~dg~i~~wd~~~~ 234 (708)
..++|+|||++|++++.+ .+.+|+............. .+...+.++.++|+++ ++ ....+..|.+|+....
T Consensus 86 ~~l~~spDg~~l~v~~~~~~~v~~~~~~~~~~~~~~~~~-----~~~~~~~~v~~s~d~~~~~~~~~~~~~i~~~~~~~~ 160 (333)
T d1ri6a_ 86 THISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVV-----EGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDD 160 (333)
T ss_dssp SEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEE-----CCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTT
T ss_pred eEEEEcCCCCEEeecccCCCceeeeccccccceeccccc-----CCCccceEEEeeecceeeeccccccceeeEEEeccC
Confidence 789999999999998764 8999998877766655543 2255677899999995 44 4445677999998765
Q ss_pred eeEEE------eeccccCeEEEEEeCCCCEEEEEe-cCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEE
Q psy12614 235 VQWSD------VKTHKKDILALTVSEDENYLYCAG-VDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKS 307 (708)
Q Consensus 235 ~~~~~------~~~~~~~i~~~~~s~~~~~l~~~~-~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~ 307 (708)
..... ..........++|++++..++... ..+...+|+... .. .........
T Consensus 161 ~~~~~~~~~~~~~~~g~~p~~i~~~~~~~~~~~~~~~~~~~~v~~~~~--------~~----~~~~~~~~~--------- 219 (333)
T d1ri6a_ 161 GHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKD--------PH----GNIECVQTL--------- 219 (333)
T ss_dssp SCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSC--------TT----SCCEEEEEE---------
T ss_pred CcceeeeceeeeeecCCCccEEEEeccceeEEeeccccCceEEEeecc--------cc----cceeeeeee---------
Confidence 33221 112345668899999998887665 455677777655 21 000000000
Q ss_pred EEEeCCEEEEEcCCCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEEE--cCCeEEEEEecCCCCCCCCCCCCCCc
Q psy12614 308 LALHGNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQ--YTSHLELWSLGSAQSTDLSSHSNTTG 385 (708)
Q Consensus 308 l~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~--~~~~i~i~~~~~~~~~~~~~~~~~~~ 385 (708)
...... .........+++++++++++.. ..+.+.+|++....
T Consensus 220 -------------------~~~~~~-----~~~~~~~~~~~~s~d~~~~~~~~~~~~~~~~~~~~~~~------------ 263 (333)
T d1ri6a_ 220 -------------------DMMPEN-----FSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDG------------ 263 (333)
T ss_dssp -------------------ECSCTT-----CCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTS------------
T ss_pred -------------------eeeecC-----CCccccceeEEEecccCceeeecccCCeEEEEEEcCCC------------
Confidence 000000 0012233456778888877664 56778888877644
Q ss_pred ccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEEEc--CCceEEEEEEecCCc
Q psy12614 386 VPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYST--ESCVRLHSLDLDGDK 437 (708)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~--d~~i~i~~~~~~~~~ 437 (708)
........ ......+..++|+|||++|+++. ++.|++|+++...+.
T Consensus 264 -----~~~~~~~~-~~~~~~p~~~a~spDGk~l~va~~~~~~v~v~~id~~tG~ 311 (333)
T d1ri6a_ 264 -----SVLSKEGF-QPTETQPRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGL 311 (333)
T ss_dssp -----CCEEEEEE-EECSSSCCCEEECTTSSEEEEECTTTCEEEEEEEETTTTE
T ss_pred -----CEEEEEEE-eCCCCCeeEEEEeCCCCEEEEEECCCCeEEEEEEECCCCc
Confidence 11122222 23445677899999999988753 789999999864443
|
| >d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Putative isomerase YbhE family: Putative isomerase YbhE domain: Putative isomerase YbhE species: Escherichia coli [TaxId: 562]
Probab=99.79 E-value=1e-16 Score=156.90 Aligned_cols=278 Identities=10% Similarity=0.131 Sum_probs=191.5
Q ss_pred EEEEeCCCcEEEEeCCCCCeEE-EEEecCCCCCcEEEEEEe--CCEEEEE-cCCCcEEEEECCCCeEeEEE---eecCCc
Q psy12614 41 LAVSRADQSIEIWDISETPHVD-RVFIGDPLSNSIECLTWF--NDRLFSG-GLQGFVNEYDMRRLNIKSST---AVTSGT 113 (708)
Q Consensus 41 la~~~~dg~v~iwd~~~~~~~~-~~~~~h~~~~~v~~l~~~--~~~l~s~-~~d~~i~vwd~~~~~~~~~~---~~~~~~ 113 (708)
++++++|++|+||++.....+. .....|. +.+..|+|+ |++|+++ ..|+.|++|++........+ ..+...
T Consensus 7 ~v~~~~~~~I~v~~~~~~~~l~~~~~~~~~--~~v~~la~spDG~~L~v~~~~d~~i~~~~i~~~~~~~~~~~~~~~~~~ 84 (333)
T d1ri6a_ 7 YIASPESQQIHVWNLNHEGALTLTQVVDVP--GQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGS 84 (333)
T ss_dssp EEEEGGGTEEEEEEECTTSCEEEEEEEECS--SCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSSC
T ss_pred EEECCCCCcEEEEEEcCCCCeEEEEEEcCC--CCEeEEEEeCCCCEEEEEECCCCeEEEEEEeCCCCcEEEeeecccCCC
Confidence 4667789999999997654332 2334676 889999999 8888555 45899999999876433322 234566
Q ss_pred eEEEEEecCCCEEEEEeC-CCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC--eEEEEEcCCCceEE
Q psy12614 114 CWCLSVHKKKRLLAAGTE-QGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA--AVRVWDIHKGHAIH 190 (708)
Q Consensus 114 v~~~~~s~~~~~la~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d--~i~iwd~~~~~~~~ 190 (708)
+..++|+|||++|++++. ++.|.+|+..............+...+.++.++||+++++.++.+ .|.+|+..+.....
T Consensus 85 p~~l~~spDg~~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~d~~~~~~~~~~~~~i~~~~~~~~~~~~ 164 (333)
T d1ri6a_ 85 LTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLV 164 (333)
T ss_dssp CSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEE
T ss_pred ceEEEEcCCCCEEeecccCCCceeeeccccccceecccccCCCccceEEEeeecceeeeccccccceeeEEEeccCCcce
Confidence 788999999999998875 678999999887766545556677788899999999999888765 89999987765443
Q ss_pred EEEecccCCCCCceeEEEEEEccCCE--EEEEcCCCcEEEEeCCCCe----eEEEee------ccccCeEEEEEeCCCCE
Q psy12614 191 KMSLDKSSKFSKNTAVWCVAFCADFT--IITGDSGGFVRFWDGKTGV----QWSDVK------THKKDILALTVSEDENY 258 (708)
Q Consensus 191 ~~~~~~~~~~~~~~~v~~~~~~~~~~--l~~~~~dg~i~~wd~~~~~----~~~~~~------~~~~~i~~~~~s~~~~~ 258 (708)
......... ........++|++++. +.+....+...+|+..... ....+. ........+++++++++
T Consensus 165 ~~~~~~~~~-~~g~~p~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~ 243 (333)
T d1ri6a_ 165 AQDPAEVTT-VEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRH 243 (333)
T ss_dssp EEEEEEEEC-STTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSE
T ss_pred eeeceeeee-ecCCCccEEEEeccceeEEeeccccCceEEEeecccccceeeeeeeeeeecCCCccccceeEEEecccCc
Confidence 322211000 2245568899999985 4556667778888764322 112221 12345677899999987
Q ss_pred EEEEe-cCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEEEc-CCCeEEEEeC--CCC
Q psy12614 259 LYCAG-VDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSGG-LDSYLSLSYY--PPK 332 (708)
Q Consensus 259 l~~~~-~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~~-~d~~i~iw~~--~~~ 332 (708)
++... .++.+.+|++.. .. ..............+..++|+ |++|++++ .++.|++|++ .++
T Consensus 244 ~~~~~~~~~~~~~~~~~~--------~~-----~~~~~~~~~~~~~~p~~~a~spDGk~l~va~~~~~~v~v~~id~~tG 310 (333)
T d1ri6a_ 244 LYACDRTASLITVFSVSE--------DG-----SVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQG 310 (333)
T ss_dssp EEEEETTTTEEEEEEECT--------TS-----CCEEEEEEEECSSSCCCEEECTTSSEEEEECTTTCEEEEEEEETTTT
T ss_pred eeeecccCCeEEEEEEcC--------CC-----CEEEEEEEeCCCCCeeEEEEeCCCCEEEEEECCCCeEEEEEEECCCC
Confidence 77654 467899999876 32 111222233445667889999 88777665 5689999955 444
Q ss_pred ce
Q psy12614 333 TL 334 (708)
Q Consensus 333 ~~ 334 (708)
.+
T Consensus 311 ~l 312 (333)
T d1ri6a_ 311 LL 312 (333)
T ss_dssp EE
T ss_pred cE
Confidence 44
|
| >d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.74 E-value=4.3e-16 Score=153.88 Aligned_cols=298 Identities=10% Similarity=0.016 Sum_probs=182.6
Q ss_pred EEECCCCCEEEEec-----CC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEE----------cCC
Q psy12614 161 TAWHSSGDYLVTGC-----AA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITG----------DSG 223 (708)
Q Consensus 161 ~~~s~d~~~l~~~~-----~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~----------~~d 223 (708)
.+.+||++.+++.. .. .|.+||..+++.+.++..+ . ...++|+|||+ +++. ..+
T Consensus 7 ~a~spdg~~~~v~~~~~~~~~~~v~v~D~~tg~~~~~~~~g-------~--~~~~a~SpDg~~l~v~~~~~~~~~~g~~d 77 (355)
T d2bbkh_ 7 EAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGG-------F--LPNPVVADDGSFIAHASTVFSRIARGERT 77 (355)
T ss_dssp CCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEEC-------S--SCEEEECTTSSCEEEEEEEEEETTEEEEE
T ss_pred EeeCCCCCEEEEEecccCCCcCeEEEEECCCCcEEEEEECC-------C--CCceEEcCCCCEEEEEeCCCccccccCCC
Confidence 35689999987653 34 7999999999999988754 2 22689999996 5433 347
Q ss_pred CcEEEEeCCCCeeEEEeecccc-------CeEEEEEeCCCCEEEEEe--cCCeEEEEEccCCcccccCCCCCCCCcceEE
Q psy12614 224 GFVRFWDGKTGVQWSDVKTHKK-------DILALTVSEDENYLYCAG--VDPTVVCFQRTRKPQVCSTSGPEQGSSVWVR 294 (708)
Q Consensus 224 g~i~~wd~~~~~~~~~~~~~~~-------~i~~~~~s~~~~~l~~~~--~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~ 294 (708)
+.|++||+.+++.+..+..+.. ....++|+|++++++.+. .+..+.+|+..+ ++ .
T Consensus 78 ~~v~v~D~~t~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~--------~~--------~ 141 (355)
T d2bbkh_ 78 DYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEG--------KA--------F 141 (355)
T ss_dssp EEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTT--------TE--------E
T ss_pred CEEEEEECCCCCEEEEEecCCcceeecCCCCceEEEecCCCeeEEecCCCCceeeeeecCC--------Cc--------E
Confidence 8999999999998887654322 335689999999988775 456889999988 53 2
Q ss_pred eEEEeccccceEEEEEeCCEEEEEcCCCeEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEEE--cCCeEEEEEecCC
Q psy12614 295 SVNRVIHEGDVKSLALHGNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQ--YTSHLELWSLGSA 372 (708)
Q Consensus 295 ~~~~~~~~~~v~~l~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~--~~~~i~i~~~~~~ 372 (708)
...+..+.. ...........+ .++++++.++.. .++.+.+++....
T Consensus 142 ~~~~~~~~~-~~~~~~~~~~~~-------------------------------~~~~dg~~~~v~~~~~~~~~~~~~~~~ 189 (355)
T d2bbkh_ 142 KRMLDVPDC-YHIFPTAPDTFF-------------------------------MHCRDGSLAKVAFGTEGTPEITHTEVF 189 (355)
T ss_dssp EEEEECCSE-EEEEEEETTEEE-------------------------------EEETTSCEEEEECCSSSCCEEEECCCC
T ss_pred eeEEecCCc-ceEeecCCcceE-------------------------------EEcCCCCEEEEEecCCCeEEEEecccc
Confidence 222222211 111111123333 334444443332 2233344443332
Q ss_pred CCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEE-EcCCceEEEEEEecCCcceeEEeecCCcccc
Q psy12614 373 QSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAY-STESCVRLHSLDLDGDKPQISRIKNLPAPLF 451 (708)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~-~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~ 451 (708)
. ..+...+...++++++..++. +.++.+++|++..+. ..... ....+..
T Consensus 190 ~--------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~~--~~~~~~~ 239 (355)
T d2bbkh_ 190 H--------------------------PEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGD--AKFLP--AVEALTE 239 (355)
T ss_dssp S--------------------------CTTSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTSS--CEECC--CEESSCH
T ss_pred c--------------------------ceecceeeeccccCCCCeEEEecCCCeEEEEecCCCc--EEEEe--ccCCccc
Confidence 2 012222334455666666665 458889999887532 11110 0111100
Q ss_pred --------cceeEEEEEecCCCeEEEEecCCc----------EEEecCCCeEEEEEecCCCCCccCcceEEEEECCCCc-
Q psy12614 452 --------KSIFTHVLISADSTLLLAVSLNGP----------LYIIDLSSLEIKYCVDPYKSNLMSDVISLVQMSECKQ- 512 (708)
Q Consensus 452 --------~~~i~~~~~s~d~~~l~~~~~dg~----------i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~- 512 (708)
......+++++|+..++....++. |+.++..+.+.+..+.. ...+.+++|+|||+
T Consensus 240 ~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~v~d~~t~~~~~~~~~------~~~~~~~a~spDG~~ 313 (355)
T d2bbkh_ 240 AERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEM------GHEIDSINVSQDEKP 313 (355)
T ss_dssp HHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEE------EEEECEEEECCSSSC
T ss_pred ceEeeeeeccceEEEEEeCCCCeEEEEeccCCceeecCCCCeEEEEeCCCCcEEEEecC------CCCEEEEEEcCCCCe
Confidence 111223889999998887665431 44444444466666653 44688999999998
Q ss_pred -EEEEEecCCeEEEEECCc--eeeecCCCCCCceEEEEcCCC
Q psy12614 513 -YIVCADRKSHVVIWKNGQ--HHASLPRYRKPSTAMAIHPTL 551 (708)
Q Consensus 513 -~l~~~~~d~~i~iw~~~~--~~~~~~~~~~~v~~l~~s~d~ 551 (708)
+++++..|+.|++||..+ ....+..+......+.+.++|
T Consensus 314 ~l~v~~~~d~~i~v~D~~tg~~~~~i~~~G~~p~~i~~~d~~ 355 (355)
T d2bbkh_ 314 LLYALSTGDKTLYIHDAESGEELRSVNQLGHGPQVITTADMG 355 (355)
T ss_dssp EEEEEETTTTEEEEEETTTCCEEEEECCCCSSCCEEECCCCC
T ss_pred EEEEEECCCCEEEEEECCCCCEEEEEeCcCCCccEEEeCCCC
Confidence 345667799999999984 445788777777777776553
|
| >d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.73 E-value=5.8e-16 Score=152.97 Aligned_cols=287 Identities=11% Similarity=0.024 Sum_probs=193.9
Q ss_pred EEEEEEcCCCCEEEEEe-----CCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEc----------CCC
Q psy12614 29 INCIACEPKSSRLAVSR-----ADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGG----------LQG 91 (708)
Q Consensus 29 v~~~~~s~~~~~la~~~-----~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~----------~d~ 91 (708)
+.-.+.+||++++++.. .++.|.+||..+++.+. .+..+. .+ .++|+ |++|++++ .|+
T Consensus 4 ~~~~a~spdg~~~~v~~~~~~~~~~~v~v~D~~tg~~~~-~~~~g~--~~--~~a~SpDg~~l~v~~~~~~~~~~g~~d~ 78 (355)
T d2bbkh_ 4 RILEAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIG-MIDGGF--LP--NPVVADDGSFIAHASTVFSRIARGERTD 78 (355)
T ss_dssp CBCCCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEE-EEEECS--SC--EEEECTTSSCEEEEEEEEEETTEEEEEE
T ss_pred cEeEeeCCCCCEEEEEecccCCCcCeEEEEECCCCcEEE-EEECCC--CC--ceEEcCCCCEEEEEeCCCccccccCCCC
Confidence 33446789999998763 34579999999999887 666655 33 68999 77777543 478
Q ss_pred cEEEEECCCCeEeEEEeecCC-------ceEEEEEecCCCEEEEEe--CCCcEEEEEccCCcEEEEEeccccc-------
Q psy12614 92 FVNEYDMRRLNIKSSTAVTSG-------TCWCLSVHKKKRLLAAGT--EQGHINLFQISDEGLLYEKLLDRQQ------- 155 (708)
Q Consensus 92 ~i~vwd~~~~~~~~~~~~~~~-------~v~~~~~s~~~~~la~~~--~d~~i~iwd~~~~~~~~~~~~~~~~------- 155 (708)
.|.+||..+++.+..+..+.. ....++|+|++++++++. .+..+.+|+..+++... .+..+.
T Consensus 79 ~v~v~D~~t~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 156 (355)
T d2bbkh_ 79 YVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKR--MLDVPDCYHIFPT 156 (355)
T ss_dssp EEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEE--EEECCSEEEEEEE
T ss_pred EEEEEECCCCCEEEEEecCCcceeecCCCCceEEEecCCCeeEEecCCCCceeeeeecCCCcEee--EEecCCcceEeec
Confidence 999999999999888765432 235689999999888765 46789999999988763 332221
Q ss_pred ccEEEEEECCCCCEEEEecCC--eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCC-EEEEEcCCCcEEEEeCC
Q psy12614 156 GRILCTAWHSSGDYLVTGCAA--AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADF-TIITGDSGGFVRFWDGK 232 (708)
Q Consensus 156 ~~v~~~~~s~d~~~l~~~~~d--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~~~~~dg~i~~wd~~ 232 (708)
+....+.+++|++.++....+ .+.+++....... +...+....+.+++ .++.++.++.+++|++.
T Consensus 157 ~~~~~~~~~~dg~~~~v~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 224 (355)
T d2bbkh_ 157 APDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPE------------DEFLINHPAYSQKAGRLVWPTYTGKIHQIDLS 224 (355)
T ss_dssp ETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCT------------TSCBCSCCEEETTTTEEEEEBTTSEEEEEECT
T ss_pred CCcceEEEcCCCCEEEEEecCCCeEEEEecccccce------------ecceeeeccccCCCCeEEEecCCCeEEEEecC
Confidence 223456677777776655444 5666655443321 13333444555554 68889999999999998
Q ss_pred CCeeEEE--eec----------cccCeEEEEEeCCCCEEEEEecC----------CeEEEEEccCCcccccCCCCCCCCc
Q psy12614 233 TGVQWSD--VKT----------HKKDILALTVSEDENYLYCAGVD----------PTVVCFQRTRKPQVCSTSGPEQGSS 290 (708)
Q Consensus 233 ~~~~~~~--~~~----------~~~~i~~~~~s~~~~~l~~~~~d----------g~i~iw~~~~~~~~~~~~g~~~~~~ 290 (708)
.++.... ... .......+++++++..++....+ ..|.+||..+ ++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~v~d~~t--------~~----- 291 (355)
T d2bbkh_ 225 SGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKT--------GE----- 291 (355)
T ss_dssp TSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTT--------CC-----
T ss_pred CCcEEEEeccCCcccceEeeeeeccceEEEEEeCCCCeEEEEeccCCceeecCCCCeEEEEeCCC--------Cc-----
Confidence 7754321 111 11233568899999988876544 3699999998 65
Q ss_pred ceEEeEEEeccccceEEEEEe--CC--EEEEEcCCCeEEEEeCCCCc-eeecCccCCCCceEEEEc
Q psy12614 291 VWVRSVNRVIHEGDVKSLALH--GN--RLYSGGLDSYLSLSYYPPKT-LVKYPCTLAQSTPVSLAK 351 (708)
Q Consensus 291 ~~~~~~~~~~~~~~v~~l~~~--~~--~l~s~~~d~~i~iw~~~~~~-~~~~~~~~~~~~~~~~s~ 351 (708)
....+. +...+.+++|+ |+ ++++++.|+.|.+||+.+.+ ++.+......+..+.+.+
T Consensus 292 ---~~~~~~-~~~~~~~~a~spDG~~~l~v~~~~d~~i~v~D~~tg~~~~~i~~~G~~p~~i~~~d 353 (355)
T d2bbkh_ 292 ---RLAKFE-MGHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQLGHGPQVITTAD 353 (355)
T ss_dssp ---EEEEEE-EEEEECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEECCCCSSCCEEECCC
T ss_pred ---EEEEec-CCCCEEEEEEcCCCCeEEEEEECCCCEEEEEECCCCCEEEEEeCcCCCccEEEeCC
Confidence 333333 34567889998 55 45677889999999998887 444542333344444433
|
| >d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl peptidase IV/CD26, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.62 E-value=5.6e-14 Score=144.15 Aligned_cols=360 Identities=13% Similarity=0.037 Sum_probs=198.4
Q ss_pred EEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEE---ecccccccEEEEEECCCCCEEEEecC---------C-eEEEEE
Q psy12614 116 CLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEK---LLDRQQGRILCTAWHSSGDYLVTGCA---------A-AVRVWD 182 (708)
Q Consensus 116 ~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~---~~~~~~~~v~~~~~s~d~~~l~~~~~---------d-~i~iwd 182 (708)
.+.|.++++++. ..++.+.+||+.+++..... .+..|...|.++.|||||++|+.++. + .+.+||
T Consensus 21 ~~~W~~d~~~~~--~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~i~~~~~SpDg~~i~~~~~~~~~~r~s~~~~~~l~d 98 (470)
T d2bgra1 21 SLRWISDHEYLY--KQENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYD 98 (470)
T ss_dssp CCEECSSSEEEE--ESSSCEEEEETTTCCEEEEECTTTTTTSSSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEE
T ss_pred CCEeCCCCEEEE--EcCCcEEEEECCCCCEEEEEchhhhhhccCccceeEECCCCCEEEEEECCcceeeeccCceEEEEE
Confidence 577999998775 45788999999999875211 33455678999999999999998753 3 678999
Q ss_pred cCCCceEEEEEecccCCCCCceeEEEEEEccCCEEEEEcCCCcEEEEeCCCCeeEEEeecc------------------c
Q psy12614 183 IHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVKTH------------------K 244 (708)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~------------------~ 244 (708)
+.+++.. .+. .+...+..+.|+|||+.++-..++.+++|+..+++..+....+ .
T Consensus 99 ~~~~~~~-~l~-------~~~~~~~~~~~SPDG~~ia~~~~~~l~~~~~~~g~~~~~t~~~~~~~~~~g~~d~~~~~~~~ 170 (470)
T d2bgra1 99 LNKRQLI-TEE-------RIPNNTQWVTWSPVGHKLAYVWNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVF 170 (470)
T ss_dssp TTTTEEC-CSS-------CCCTTEEEEEECSSTTCEEEEETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTS
T ss_pred CCCCccc-ccc-------cCCccccccccccCcceeeEeecccceEEECCCCceeeeeeccCCCcccccccceeeeeeec
Confidence 9988643 232 2367789999999997444456789999999988766544221 2
Q ss_pred cCeEEEEEeCCCCEEEEEecCCe-EEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEeCCEEEEEcCCCe
Q psy12614 245 KDILALTVSEDENYLYCAGVDPT-VVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALHGNRLYSGGLDSY 323 (708)
Q Consensus 245 ~~i~~~~~s~~~~~l~~~~~dg~-i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~s~~~d~~ 323 (708)
+....+.|||||++|+....|.. +..|.+.. ... ..........+.+. ...+...+..
T Consensus 171 ~~~~~~~wSPDGk~ia~~~~d~~~v~~~~~~~--------~~~-----------~~~~~~~~~~~~~~--~~g~~~~~~~ 229 (470)
T d2bgra1 171 SAYSALWWSPNGTFLAYAQFNDTEVPLIEYSF--------YSD-----------ESLQYPKTVRVPYP--KAGAVNPTVK 229 (470)
T ss_dssp SSSBCEEECTTSSEEEEEEEECTTCCEEEEEE--------CCS-----------TTCSSCEEEEEECC--BTTSCCCEEE
T ss_pred CCccccEECCCCCccceeEecCCcCceEEEEe--------ecc-----------CCCCCCeeeeeccc--cccccCCcce
Confidence 33456889999999998876543 55554432 000 00000111111111 0001122345
Q ss_pred EEEEeCCCCceeecCc------------cCCCCceEEEEcCCcEEEEE---cCC--eEEEEEecCCCCCCCCCCCCCCcc
Q psy12614 324 LSLSYYPPKTLVKYPC------------TLAQSTPVSLAKDIQHVLLQ---YTS--HLELWSLGSAQSTDLSSHSNTTGV 386 (708)
Q Consensus 324 i~iw~~~~~~~~~~~~------------~~~~~~~~~~s~~~~~l~~~---~~~--~i~i~~~~~~~~~~~~~~~~~~~~ 386 (708)
+.+|++.......... .......+.+.+++++++.. ..+ .+.+++...... ......
T Consensus 230 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~r~~~~~~~~~~~~d~~tg-----~~~~~~- 303 (470)
T d2bgra1 230 FFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSG-----RWNCLV- 303 (470)
T ss_dssp EEEEEGGGCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTT-----EEEECG-
T ss_pred EEEEECCCcceeeeccccccCCccccCCCCceEEEEEEcCCCceeEEEeeccCCceEEEEEEecCCCC-----cEEEEE-
Confidence 7778876654222110 00112357778888776653 112 244554433210 000000
Q ss_pred cCCCCceEEEEEE-----ecCCCceEEEEeCCCC--cEEEEEc-CCceEEEEEEecCCcceeEEeecCCcccccceeEEE
Q psy12614 387 PLLSFPRLIVKMS-----AVNNATIRCSVVSNDG--KYVAYST-ESCVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHV 458 (708)
Q Consensus 387 ~~~~~~~~~~~~~-----~~~~~~i~~~~~s~~g--~~l~~~~-d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 458 (708)
........ ..+... ...+.+++ .++..+. +|..+||.+....... .. +..+. ..|..+
T Consensus 304 -----~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~~~~~s~~dg~~~ly~~~~~g~~~--~~---lt~g~--~~v~~~ 369 (470)
T d2bgra1 304 -----ARQHIEMSTTGWVGRFRPS--EPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDC--TF---ITKGT--WEVIGI 369 (470)
T ss_dssp -----GGCEEEECSSSCSSSSSCC--CCEECTTSSEEEEEEECTTSCEEEEEEETTCSCC--EE---SCCSS--SCEEEE
T ss_pred -----EEeeeeeeccceeecccCC--CceeeecCCCcEEEEeccCcCceeEEEeccCCce--ee---eccCC--eeEEEE
Confidence 00000000 001111 12333333 3344454 8888888777644332 22 32221 233334
Q ss_pred EEecCCCeEE-EEecC-----Cc-EEEecCCCeEEEEEec-CCCCCccCcceEEEEECCCCcEEEEE---ecCCeEEEEE
Q psy12614 459 LISADSTLLL-AVSLN-----GP-LYIIDLSSLEIKYCVD-PYKSNLMSDVISLVQMSECKQYIVCA---DRKSHVVIWK 527 (708)
Q Consensus 459 ~~s~d~~~l~-~~~~d-----g~-i~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~~~s~~~~~l~~~---~~d~~i~iw~ 527 (708)
++++++.++ ++..+ +. ||.+..........+. ...+| ...+..++|||||+|++.. ...-.+.+|+
T Consensus 370 -~~~d~~~iyf~a~~~~~~p~~~~ly~v~~~g~~~~~~lt~~~~~~--~~~~~s~~fSpdgky~~~~~s~~~~P~~~l~~ 446 (470)
T d2bgra1 370 -EALTSDYLYYISNEYKGMPGGRNLYKIQLSDYTKVTCLSCELNPE--RCQYYSVSFSKEAKYYQLRCSGPGLPLYTLHS 446 (470)
T ss_dssp -EEECSSEEEEEESCGGGCTTCBEEEEEETTCTTCEEESSTTTSTT--TBCBEEEEECTTSSEEEEEECSBSSCEEEEEE
T ss_pred -EEECCCEEEEEEecCCCCcceEEEEEEECCCCCceeEecccccCC--CCCEEEEEECCCCCEEEEEecCCCCCeEEEEE
Confidence 444555543 33322 22 8888654333344443 22344 6788999999999998843 3334577777
Q ss_pred CC
Q psy12614 528 NG 529 (708)
Q Consensus 528 ~~ 529 (708)
..
T Consensus 447 ~~ 448 (470)
T d2bgra1 447 SV 448 (470)
T ss_dssp TT
T ss_pred CC
Confidence 66
|
| >d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nitrous oxide reductase, N-terminal domain family: Nitrous oxide reductase, N-terminal domain domain: Nitrous oxide reductase, N-terminal domain species: Pseudomonas nautica [TaxId: 2743]
Probab=99.58 E-value=1e-15 Score=149.12 Aligned_cols=336 Identities=12% Similarity=0.011 Sum_probs=205.1
Q ss_pred EEEEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEE
Q psy12614 84 LFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAW 163 (708)
Q Consensus 84 l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~ 163 (708)
++|++.+|+|++|++.+++.+.++. .|+|++... .|..+.+.+++.. +... .....|........+
T Consensus 14 f~Sgg~sG~V~V~dlpS~r~l~~Ip---------Vfspd~~~g-~g~~~es~~vl~~--~~~~--~~gd~hhP~~s~t~g 79 (441)
T d1qnia2 14 FWSGGHQGEVRVLGVPSMRELMRIP---------VFNVDSATG-WGITNESKEILGG--DQQY--LNGDCHHPHISMTDG 79 (441)
T ss_dssp EEECBTTCCEEEEEETTTEEEEEEC---------SSSBCTTTC-TTTSHHHHHHHCS--SSCC--SCCCBCCCEEEEETT
T ss_pred EEeCCCCCcEEEEeCCCCcEEEEEE---------eEcCCCCEE-EEECCccceEEec--cccc--ccCcccCCCcceecc
Confidence 4677889999999999999988774 278887542 2322222222211 1110 122334445566667
Q ss_pred CCCCCEEEEecCC--eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE--EEEEcCCCcE-------------
Q psy12614 164 HSSGDYLVTGCAA--AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT--IITGDSGGFV------------- 226 (708)
Q Consensus 164 s~d~~~l~~~~~d--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--l~~~~~dg~i------------- 226 (708)
+|||++|++.... .|.++|+.+++....+..+. ...+..++|+|+|+ ++++..+..+
T Consensus 80 tpDGr~lfV~d~~~~rVavIDl~t~k~~~ii~iP~------g~gphgi~~spdg~t~YV~~~~~~~v~~~~dg~~~~~~~ 153 (441)
T d1qnia2 80 RYDGKYLFINDKANTRVARIRLDIMKTDKITHIPN------VQAIHGLRLQKVPKTNYVFCNAEFVIPQPNDGTDFSLDN 153 (441)
T ss_dssp EEEEEEEEEEETTTTEEEEEETTTTEEEEEEECTT------CCCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCGGG
T ss_pred cCCCCEEEEEcCCCCEEEEEECCCCcEeeEEecCC------CCCccceEEeccCCEEEEEeccCCcccccCccccccccc
Confidence 8999999777654 99999999999988877643 56789999999996 4544433333
Q ss_pred -----EEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEecCC-eEEEEEccCCcccccCCCCCCCCcceEEeEEEec
Q psy12614 227 -----RFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDP-TVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVI 300 (708)
Q Consensus 227 -----~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg-~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 300 (708)
..+|..+.+....+.. ......+.++|+|+++++++.+. .+..++..+ .. ...++......
T Consensus 154 ~~~~~~~iD~~t~~v~~qI~v-~~~p~~v~~spdGk~a~vt~~nse~~~~id~~t--------~~---~~d~i~v~n~p- 220 (441)
T d1qnia2 154 SYTMFTAIDAETMDVAWQVIV-DGNLDNTDADYTGKYATSTCYNSERAVDLAGTM--------RN---DRDWVVVFNVE- 220 (441)
T ss_dssp EEEEEEEEETTTCSEEEEEEE-SSCCCCEEECSSSSEEEEEESCTTCCSSHHHHT--------CS---SBCEEEEEEHH-
T ss_pred ccceEEeecCccceeeEEEec-CCCccceEECCCCCEEEEEecCCCceEEEeccC--------cc---eEEEEEeCCcc-
Confidence 5588888877777664 35678899999999999888663 333333333 21 11111111100
Q ss_pred cccceEEEEEe--CCEEEEEcCCCeEEEEeCCCCc-eeecCccCCCCceEEEEcCCcEEEEE--cCCeEEEEEecCCCCC
Q psy12614 301 HEGDVKSLALH--GNRLYSGGLDSYLSLSYYPPKT-LVKYPCTLAQSTPVSLAKDIQHVLLQ--YTSHLELWSLGSAQST 375 (708)
Q Consensus 301 ~~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~~~-~~~~~~~~~~~~~~~~s~~~~~l~~~--~~~~i~i~~~~~~~~~ 375 (708)
..+++. |+++. .+.++.+.+++..... +..++ ....+..+.++|||++++++ .++++.+||+.....
T Consensus 221 -----~~~~~~~dGk~~~-v~~~~v~vvd~~~~~~v~~~IP-vgksPhGv~vSPDGkyl~~~~~~~~tvsv~d~~k~~~- 292 (441)
T d1qnia2 221 -----RIAAAVKAGNFKT-IGDSKVPVVDGRGESEFTRYIP-VPKNPHGLNTSPDGKYFIANGKLSPTVSVIAIDKLDD- 292 (441)
T ss_dssp -----HHHHHHHTTCCBC-CTTCCCCEEECSSSCSSEEEEC-CBSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHH-
T ss_pred -----ceEEEecCCCEEE-eCCCCcEEEEcccCCceEEEEe-CCCCccCceECCCCCEEEEeCCcCCcEEEEEeehhhh-
Confidence 111122 44443 3556777888766654 44555 34456789999999998875 778999999875331
Q ss_pred CCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEEEc-CCceEEEEEEec-------CCcceeEE--eec
Q psy12614 376 DLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYST-ESCVRLHSLDLD-------GDKPQISR--IKN 445 (708)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~~-d~~i~i~~~~~~-------~~~~~~~~--~~~ 445 (708)
.+.+.-+ ............-.....+|+++|..+.+.. |..|..|++... .....+.+ ++-
T Consensus 293 ~~~~~~~---------~~~~~~~~~~~glgplh~~fd~~g~~yts~~~ds~v~kw~~~~~~~~~~~~~~~~v~~~~~v~y 363 (441)
T d1qnia2 293 LFEDKIE---------LRDTIVAEPELGLGPLHTTFDGRGNAYTTLFIDSQVCKWNIADAIKHYNGDRVNYIRQKLDVQY 363 (441)
T ss_dssp HTTTSSC---------GGGGEEECCBCCSCEEEEEECSSSEEEEEETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSS
T ss_pred HhhccCC---------cceEEEeecccccCcccceecCCceEEEcccccceEEEeccchhhhhhccCCCceeEecccccc
Confidence 0111100 0011111111222345568999997666644 999999998521 11112222 111
Q ss_pred CCcccc-cceeEEEEEecCCCeEEEEec
Q psy12614 446 LPAPLF-KSIFTHVLISADSTLLLAVSL 472 (708)
Q Consensus 446 ~~~~~~-~~~i~~~~~s~d~~~l~~~~~ 472 (708)
.++|.. ... .+++|||++|++++.
T Consensus 364 ~~GH~~~~~~---~t~~pdGk~l~s~~k 388 (441)
T d1qnia2 364 QPGHNHASLT---ESRDADGKWLVVLSK 388 (441)
T ss_dssp CEEEEEETTT---TSTTCCCCEEEEEES
T ss_pred CCCCCccccc---cccCCCCcEEEecCc
Confidence 256665 333 689999999999953
|
| >d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl peptidase IV/CD26, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.58 E-value=1.8e-12 Score=132.71 Aligned_cols=364 Identities=8% Similarity=0.020 Sum_probs=205.5
Q ss_pred EEEEEccCCEEEEEcCCCcEEEEeCCCCeeEEEee-----ccccCeEEEEEeCCCCEEEEEec---------CCeEEEEE
Q psy12614 207 WCVAFCADFTIITGDSGGFVRFWDGKTGVQWSDVK-----THKKDILALTVSEDENYLYCAGV---------DPTVVCFQ 272 (708)
Q Consensus 207 ~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~-----~~~~~i~~~~~s~~~~~l~~~~~---------dg~i~iw~ 272 (708)
..+.|.+|++++.- .++.+.+||+.+++....+. .|...|.++.|||||++|+.++. ++.+.+||
T Consensus 20 ~~~~W~~d~~~~~~-~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~i~~~~~SpDg~~i~~~~~~~~~~r~s~~~~~~l~d 98 (470)
T d2bgra1 20 YSLRWISDHEYLYK-QENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYD 98 (470)
T ss_dssp CCCEECSSSEEEEE-SSSCEEEEETTTCCEEEEECTTTTTTSSSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEE
T ss_pred cCCEeCCCCEEEEE-cCCcEEEEECCCCCEEEEEchhhhhhccCccceeEECCCCCEEEEEECCcceeeeccCceEEEEE
Confidence 35779999987654 47889999999998766544 34578999999999999998753 46789999
Q ss_pred ccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEEEcCCCeEEEEeCCCCceeecCc-----------
Q psy12614 273 RTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSGGLDSYLSLSYYPPKTLVKYPC----------- 339 (708)
Q Consensus 273 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~~~~~~~~~----------- 339 (708)
+.+ ++ ...+..+...+....|+ |+.++.. .++.+.+|+..++...+...
T Consensus 99 ~~~--------~~---------~~~l~~~~~~~~~~~~SPDG~~ia~~-~~~~l~~~~~~~g~~~~~t~~~~~~~~~~g~ 160 (470)
T d2bgra1 99 LNK--------RQ---------LITEERIPNNTQWVTWSPVGHKLAYV-WNNDIYVKIEPNLPSYRITWTGKEDIIYNGI 160 (470)
T ss_dssp TTT--------TE---------ECCSSCCCTTEEEEEECSSTTCEEEE-ETTEEEEESSTTSCCEECCSCCBTTTEEESB
T ss_pred CCC--------Cc---------ccccccCCccccccccccCcceeeEe-ecccceEEECCCCceeeeeeccCCCcccccc
Confidence 998 63 55677788889999999 8888875 57789999998876443321
Q ss_pred --------cCCCCceEEEEcCCcEEEEE--cCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEE
Q psy12614 340 --------TLAQSTPVSLAKDIQHVLLQ--YTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCS 409 (708)
Q Consensus 340 --------~~~~~~~~~~s~~~~~l~~~--~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 409 (708)
.......+.|||||+.++.. .+..+..|.+..... .. ........+
T Consensus 161 ~d~~~~~~~~~~~~~~~wSPDGk~ia~~~~d~~~v~~~~~~~~~~-------------~~-----------~~~~~~~~~ 216 (470)
T d2bgra1 161 TDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSD-------------ES-----------LQYPKTVRV 216 (470)
T ss_dssp CCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCS-------------TT-----------CSSCEEEEE
T ss_pred cceeeeeeecCCccccEECCCCCccceeEecCCcCceEEEEeecc-------------CC-----------CCCCeeeee
Confidence 11223457899999999984 233344444332110 00 000111112
Q ss_pred EeCCCCcEEEEEcCCceEEEEEEecCCcceeEEe-ecCCcccc--cceeEEEEEecCCCeEEEEecC-Cc-----EEEec
Q psy12614 410 VVSNDGKYVAYSTESCVRLHSLDLDGDKPQISRI-KNLPAPLF--KSIFTHVLISADSTLLLAVSLN-GP-----LYIID 480 (708)
Q Consensus 410 ~~s~~g~~l~~~~d~~i~i~~~~~~~~~~~~~~~-~~~~~~~~--~~~i~~~~~s~d~~~l~~~~~d-g~-----i~~~~ 480 (708)
.+...|.. ..+..+.+|++............ ...+.... ...+..+.|.++++.++..... +. ++.++
T Consensus 217 ~~~~~g~~---~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~r~~~~~~~~~~~~d 293 (470)
T d2bgra1 217 PYPKAGAV---NPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYD 293 (470)
T ss_dssp ECCBTTSC---CCEEEEEEEEGGGCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEE
T ss_pred cccccccc---CCcceEEEEECCCcceeeeccccccCCccccCCCCceEEEEEEcCCCceeEEEeeccCCceEEEEEEec
Confidence 22111110 01234566666553322111100 00111111 2345668899999877654332 22 56665
Q ss_pred CCCeEEEEEec------CCCC--CccCcceEEEEECCCCcEEEEEecCCeEEEE--ECCc-eeeecCCCCCCceEEEEcC
Q psy12614 481 LSSLEIKYCVD------PYKS--NLMSDVISLVQMSECKQYIVCADRKSHVVIW--KNGQ-HHASLPRYRKPSTAMAIHP 549 (708)
Q Consensus 481 ~~~~~~~~~~~------~~~~--~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw--~~~~-~~~~~~~~~~~v~~l~~s~ 549 (708)
..++....... ...+ ..+........+.+++.+++.+..+|...|| +... ....+..+...|..+ +++
T Consensus 294 ~~tg~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~s~~dg~~~ly~~~~~g~~~~~lt~g~~~v~~~-~~~ 372 (470)
T d2bgra1 294 ESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDCTFITKGTWEVIGI-EAL 372 (470)
T ss_dssp TTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSCCEESCCSSSCEEEE-EEE
T ss_pred CCCCcEEEEEEEeeeeeeccceeecccCCCceeeecCCCcEEEEeccCcCceeEEEeccCCceeeeccCCeeEEEE-EEE
Confidence 54433322211 0000 0001122222233344455666677765555 5553 334555566667776 444
Q ss_pred CCCEE-EEEecCC----cEEEE--EcCCCCCCchhhhhhccCchhhhcCCCCeeEEEeCCCCCceEEEEc---CeeEEEE
Q psy12614 550 TLSTL-VTVYSDH----RIVEF--DLNRKAFTTFSRKLETNHPNEWLSRQLPVLGIEFDPQDSSLIYLMD---DSALCVI 619 (708)
Q Consensus 550 d~~~l-~~~~~dg----~i~vw--d~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~~~~l~~~~~---d~~i~~w 619 (708)
+++.+ +++..++ .-.|| ++..+... ..+...+..|...+.+++|||||++++..+. .-.+.+|
T Consensus 373 d~~~iyf~a~~~~~~p~~~~ly~v~~~g~~~~-------~~lt~~~~~~~~~~~s~~fSpdgky~~~~~s~~~~P~~~l~ 445 (470)
T d2bgra1 373 TSDYLYYISNEYKGMPGGRNLYKIQLSDYTKV-------TCLSCELNPERCQYYSVSFSKEAKYYQLRCSGPGLPLYTLH 445 (470)
T ss_dssp CSSEEEEEESCGGGCTTCBEEEEEETTCTTCE-------EESSTTTSTTTBCBEEEEECTTSSEEEEEECSBSSCEEEEE
T ss_pred CCCEEEEEEecCCCCcceEEEEEEECCCCCce-------eEecccccCCCCCEEEEEECCCCCEEEEEecCCCCCeEEEE
Confidence 55554 4443332 22344 44443322 1233455678889999999999999874443 3357788
Q ss_pred ecCCC
Q psy12614 620 NKNKS 624 (708)
Q Consensus 620 d~~~~ 624 (708)
+....
T Consensus 446 ~~~~g 450 (470)
T d2bgra1 446 SSVND 450 (470)
T ss_dssp ETTTT
T ss_pred ECCCC
Confidence 76543
|
| >d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nitrous oxide reductase, N-terminal domain family: Nitrous oxide reductase, N-terminal domain domain: Nitrous oxide reductase, N-terminal domain species: Pseudomonas nautica [TaxId: 2743]
Probab=99.53 E-value=1e-14 Score=142.08 Aligned_cols=220 Identities=10% Similarity=0.030 Sum_probs=155.0
Q ss_pred EEEEeCCCcEEEEeCCCCCeEEEEEec------------------------------CCCCCcEEEEEEe--CCEEEEE-
Q psy12614 41 LAVSRADQSIEIWDISETPHVDRVFIG------------------------------DPLSNSIECLTWF--NDRLFSG- 87 (708)
Q Consensus 41 la~~~~dg~v~iwd~~~~~~~~~~~~~------------------------------h~~~~~v~~l~~~--~~~l~s~- 87 (708)
+++|+.+|.|.+|++.+++.+. .+.- |. -......++ |++|++.
T Consensus 14 f~Sgg~sG~V~V~dlpS~r~l~-~IpVfspd~~~g~g~~~es~~vl~~~~~~~~gd~hh--P~~s~t~gtpDGr~lfV~d 90 (441)
T d1qnia2 14 FWSGGHQGEVRVLGVPSMRELM-RIPVFNVDSATGWGITNESKEILGGDQQYLNGDCHH--PHISMTDGRYDGKYLFIND 90 (441)
T ss_dssp EEECBTTCCEEEEEETTTEEEE-EECSSSBCTTTCTTTSHHHHHHHCSSSCCSCCCBCC--CEEEEETTEEEEEEEEEEE
T ss_pred EEeCCCCCcEEEEeCCCCcEEE-EEEeEcCCCCEEEEECCccceEEecccccccCcccC--CCcceecccCCCCEEEEEc
Confidence 4567789999999999988776 4321 11 123333333 7888655
Q ss_pred cCCCcEEEEECCCCeEeEEEe-ecCCceEEEEEecCCC--EEEEEeCCC-----------------cEEEEEccCCcEEE
Q psy12614 88 GLQGFVNEYDMRRLNIKSSTA-VTSGTCWCLSVHKKKR--LLAAGTEQG-----------------HINLFQISDEGLLY 147 (708)
Q Consensus 88 ~~d~~i~vwd~~~~~~~~~~~-~~~~~v~~~~~s~~~~--~la~~~~d~-----------------~i~iwd~~~~~~~~ 147 (708)
..++.|.++|+.+++....+. .+...+..++|+|+|+ +++..+.+. .+..+|..+.+...
T Consensus 91 ~~~~rVavIDl~t~k~~~ii~iP~g~gphgi~~spdg~t~YV~~~~~~~v~~~~dg~~~~~~~~~~~~~~iD~~t~~v~~ 170 (441)
T d1qnia2 91 KANTRVARIRLDIMKTDKITHIPNVQAIHGLRLQKVPKTNYVFCNAEFVIPQPNDGTDFSLDNSYTMFTAIDAETMDVAW 170 (441)
T ss_dssp TTTTEEEEEETTTTEEEEEEECTTCCCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCGGGEEEEEEEEETTTCSEEE
T ss_pred CCCCEEEEEECCCCcEeeEEecCCCCCccceEEeccCCEEEEEeccCCcccccCcccccccccccceEEeecCccceeeE
Confidence 578899999999999888776 4577899999999998 444444332 23457877777764
Q ss_pred EEecccccccEEEEEECCCCCEEEEecCC--eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEEEEcCCCc
Q psy12614 148 EKLLDRQQGRILCTAWHSSGDYLVTGCAA--AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGF 225 (708)
Q Consensus 148 ~~~~~~~~~~v~~~~~s~d~~~l~~~~~d--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~ 225 (708)
.... .+....+.|+|||+++++.+.+ .+..++..+.+....+... .....++++|+|+.+..+.++.
T Consensus 171 qI~v---~~~p~~v~~spdGk~a~vt~~nse~~~~id~~t~~~~d~i~v~--------n~p~~~~~~~dGk~~~v~~~~v 239 (441)
T d1qnia2 171 QVIV---DGNLDNTDADYTGKYATSTCYNSERAVDLAGTMRNDRDWVVVF--------NVERIAAAVKAGNFKTIGDSKV 239 (441)
T ss_dssp EEEE---SSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSBCEEEEE--------EHHHHHHHHHTTCCBCCTTCCC
T ss_pred EEec---CCCccceEECCCCCEEEEEecCCCceEEEeccCcceEEEEEeC--------CccceEEEecCCCEEEeCCCCc
Confidence 3332 2456789999999999988766 5555555555544444332 1123345678998666677888
Q ss_pred EEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEE-EecCCeEEEEEccC
Q psy12614 226 VRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYC-AGVDPTVVCFQRTR 275 (708)
Q Consensus 226 i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~-~~~dg~i~iw~~~~ 275 (708)
+.+++......+..++.... ...+.++|||+++++ +..++++.+||+..
T Consensus 240 ~vvd~~~~~~v~~~IPvgks-PhGv~vSPDGkyl~~~~~~~~tvsv~d~~k 289 (441)
T d1qnia2 240 PVVDGRGESEFTRYIPVPKN-PHGLNTSPDGKYFIANGKLSPTVSVIAIDK 289 (441)
T ss_dssp CEEECSSSCSSEEEECCBSS-CCCEEECTTSCEEEEECTTSSBEEEEEGGG
T ss_pred EEEEcccCCceEEEEeCCCC-ccCceECCCCCEEEEeCCcCCcEEEEEeeh
Confidence 88888777777888876544 578999999998865 56689999999976
|
| >d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.50 E-value=1.9e-12 Score=127.75 Aligned_cols=283 Identities=7% Similarity=-0.079 Sum_probs=176.5
Q ss_pred CCCcEEEEEEcCCCCEEEE---EeCCCc--EEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEc---------
Q psy12614 25 EPKVINCIACEPKSSRLAV---SRADQS--IEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGG--------- 88 (708)
Q Consensus 25 h~~~v~~~~~s~~~~~la~---~~~dg~--v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~--------- 88 (708)
+.+....++..++++.... ...+|. |.+||..+++.+. .+.++. .. .++|+ |+.|++++
T Consensus 18 ~~g~~~~~a~~~~~~~~~v~~~~~~~g~~~~~~~d~~~~~~~~-~~~~~~--~~--~~a~spDg~~i~~~~~~~~~~~~g 92 (368)
T d1mdah_ 18 SDGSSCDHGPGAISRRSHITLPAYFAGTTENWVSCAGCGVTLG-HSLGAF--LS--LAVAGHSGSDFALASTSFARSAKG 92 (368)
T ss_dssp CCCCCBCCCCCCCTTEEEEEECTTTCSSEEEEEEETTTTEEEE-EEEECT--TC--EEEECTTSSCEEEEEEEETTTTSS
T ss_pred cCCCccccccCCCCcceeEEeeccCCCcceEEEEeCCCCcEEE-EEeCCC--CC--cceECCCCCEEEEEcccCcccccc
Confidence 4455556677888886433 233444 6677999998877 666666 44 47888 77777653
Q ss_pred -CCCcEEEEECCCCeEeEEEeecCC-------ceEEEEEecCCCEEEEEe-CCCcEEEEEccCCcEEEEEecccccccEE
Q psy12614 89 -LQGFVNEYDMRRLNIKSSTAVTSG-------TCWCLSVHKKKRLLAAGT-EQGHINLFQISDEGLLYEKLLDRQQGRIL 159 (708)
Q Consensus 89 -~d~~i~vwd~~~~~~~~~~~~~~~-------~v~~~~~s~~~~~la~~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~v~ 159 (708)
.|++|.+||..+++++..+..+.. ....++|+|||++|+++. .++.+.+||+.+++... .+..+.....
T Consensus 93 ~~d~~v~v~D~~t~~~~~~i~~p~~~~~~~g~~p~~~a~SpDGk~l~va~~~~~~v~~~d~~~~~~~~--~~~~~~~~~~ 170 (368)
T d1mdah_ 93 KRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASDDQ--LTKSASCFHI 170 (368)
T ss_dssp SEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEEEE--EEECSSCCCC
T ss_pred ccCCeEEEEECCCCcEeeeecCCccceecccCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcEeE--EeeccCcceE
Confidence 478899999999999988875432 234689999999998876 57999999999998873 3332221110
Q ss_pred EEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEEEEcCCCcEEEEeCCCCeeEE
Q psy12614 160 CTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWDGKTGVQWS 238 (708)
Q Consensus 160 ~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~ 238 (708)
+......++..+.| .+.+|++................ .+...+..+.+.+++..+. ...+.+++++...+....
T Consensus 171 ---~~~~~~~~v~~~~Dg~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~-~~~~~v~~~~~~~~~~~~ 245 (368)
T d1mdah_ 171 ---HPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTG-AQNCSSQAAQANYPGMLVW-AVASSILQGDIPAAGATM 245 (368)
T ss_dssp ---EEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCT-TSCBCSCCEEETTTTEEEE-CBSSCCEEEECCSSCCEE
T ss_pred ---ccCCCceEEEEcCCCCEEEEEecCCceeeeeeeccccc-ccccceeecccccCcEEEE-ecCCCEEEEeecCCceEE
Confidence 11112334444445 55555554433222221111000 2244455677778876433 334667777766554432
Q ss_pred Eee--c----------cccCeEEEEEeCCCCEEEEEecC---------CeEEEEEccCCcccccCCCCCCCCcceEEeEE
Q psy12614 239 DVK--T----------HKKDILALTVSEDENYLYCAGVD---------PTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVN 297 (708)
Q Consensus 239 ~~~--~----------~~~~i~~~~~s~~~~~l~~~~~d---------g~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~ 297 (708)
... . .......+++++++..++....+ ..|.+||..+ ++ ....
T Consensus 246 ~~~~~~~~~~~~~~~~~~~g~~~~a~~~~~~~~~v~~~~~~~~~~~~~~~v~v~D~~t--------~~--------~~~~ 309 (368)
T d1mdah_ 246 KAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASV--------GQ--------TSGP 309 (368)
T ss_dssp ECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSS--------CC--------EEEC
T ss_pred EeecccccceeeeeeecCCCceeEEEcCCCCEEEEEecCCCceeecCCceEEEEECCC--------Cc--------EeEE
Confidence 211 1 11223458899999888765433 3588999998 65 3333
Q ss_pred EeccccceEEEEEe--CC--EEEEEcCCCeEEEEeCCCCceee
Q psy12614 298 RVIHEGDVKSLALH--GN--RLYSGGLDSYLSLSYYPPKTLVK 336 (708)
Q Consensus 298 ~~~~~~~v~~l~~~--~~--~l~s~~~d~~i~iw~~~~~~~~~ 336 (708)
+. +...+.+++|+ ++ .++++..|+.|++||..+++...
T Consensus 310 ~~-~~~~~~~~a~spDG~~~ly~s~~~~~~v~v~D~~tgk~~~ 351 (368)
T d1mdah_ 310 IS-NGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQS 351 (368)
T ss_dssp CE-EEEEECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEE
T ss_pred ec-CCCceeEEEECCCCCEEEEEEeCCCCeEEEEECCCCCEEE
Confidence 32 34568889998 54 35677789999999998877443
|
| >d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.45 E-value=2.3e-12 Score=127.15 Aligned_cols=284 Identities=11% Similarity=-0.021 Sum_probs=167.8
Q ss_pred cCCceEEEEEecCCCEEEE---EeCCC--cEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEec----------
Q psy12614 110 TSGTCWCLSVHKKKRLLAA---GTEQG--HINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGC---------- 174 (708)
Q Consensus 110 ~~~~v~~~~~s~~~~~la~---~~~d~--~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~---------- 174 (708)
+.+....++..++++.... ...++ .|.+||..+++.. .....+... .++|+|||+.|++.+
T Consensus 18 ~~g~~~~~a~~~~~~~~~v~~~~~~~g~~~~~~~d~~~~~~~--~~~~~~~~~--~~a~spDg~~i~~~~~~~~~~~~g~ 93 (368)
T d1mdah_ 18 SDGSSCDHGPGAISRRSHITLPAYFAGTTENWVSCAGCGVTL--GHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGK 93 (368)
T ss_dssp CCCCCBCCCCCCCTTEEEEEECTTTCSSEEEEEEETTTTEEE--EEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSS
T ss_pred cCCCccccccCCCCcceeEEeeccCCCcceEEEEeCCCCcEE--EEEeCCCCC--cceECCCCCEEEEEcccCccccccc
Confidence 3455566677888885432 22334 4777799899886 444444433 589999999988754
Q ss_pred CC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEE-cCCCcEEEEeCCCCeeEEEeeccccCeEEEE
Q psy12614 175 AA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITG-DSGGFVRFWDGKTGVQWSDVKTHKKDILALT 251 (708)
Q Consensus 175 ~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~-~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~ 251 (708)
.+ .|.+||..+++.+..+..+....+........++|+|||+ ++++ ..++.+.+||+.+++.+..+..+.....
T Consensus 94 ~d~~v~v~D~~t~~~~~~i~~p~~~~~~~g~~p~~~a~SpDGk~l~va~~~~~~v~~~d~~~~~~~~~~~~~~~~~~--- 170 (368)
T d1mdah_ 94 RTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASDDQLTKSASCFHI--- 170 (368)
T ss_dssp EEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEEEEEEECSSCCCC---
T ss_pred cCCeEEEEECCCCcEeeeecCCccceecccCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcEeEEeeccCcceE---
Confidence 35 7999999999999988765321111122234689999996 5554 4679999999999999888765443321
Q ss_pred EeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceE-EeEEEeccccceEEEEEeCCEEEEEcCCCeEEEEeCC
Q psy12614 252 VSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWV-RSVNRVIHEGDVKSLALHGNRLYSGGLDSYLSLSYYP 330 (708)
Q Consensus 252 ~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~v~~l~~~~~~l~s~~~d~~i~iw~~~ 330 (708)
+......++..+.||.+..+++.. +.. ..+. .......+...+....+.....+.....+.+.+++..
T Consensus 171 ~~~~~~~~v~~~~Dg~~~~~~~~~--------~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~~~~~~ 239 (368)
T d1mdah_ 171 HPGAAATHYLGSCPASLAASDLAA--------APA---AAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVASSILQGDIP 239 (368)
T ss_dssp EEEETTEEECCCCTTSCEEEECCS--------SCC---CCEECCCCSCTTSCBCSCCEEETTTTEEEECBSSCCEEEECC
T ss_pred ccCCCceEEEEcCCCCEEEEEecC--------Cce---eeeeeecccccccccceeecccccCcEEEEecCCCEEEEeec
Confidence 112234556666777777777765 210 0000 0011112222333334441112222333444455544
Q ss_pred CCceeecC-------------ccCCCCceEEEEcCCcEEEEE--cC--------CeEEEEEecCCCCCCCCCCCCCCccc
Q psy12614 331 PKTLVKYP-------------CTLAQSTPVSLAKDIQHVLLQ--YT--------SHLELWSLGSAQSTDLSSHSNTTGVP 387 (708)
Q Consensus 331 ~~~~~~~~-------------~~~~~~~~~~~s~~~~~l~~~--~~--------~~i~i~~~~~~~~~~~~~~~~~~~~~ 387 (708)
........ ........+++++++..++.. .+ ..+.+||..+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~a~~~~~~~~~v~~~~~~~~~~~~~~~v~v~D~~t~~-------------- 305 (368)
T d1mdah_ 240 AAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQ-------------- 305 (368)
T ss_dssp SSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCC--------------
T ss_pred CCceEEEeecccccceeeeeeecCCCceeEEEcCCCCEEEEEecCCCceeecCCceEEEEECCCCc--------------
Confidence 43311111 011223568999998877653 11 258889988766
Q ss_pred CCCCceEEEEEEecCCCceEEEEeCCCCcE-EE-EEc-CCceEEEEEEe
Q psy12614 388 LLSFPRLIVKMSAVNNATIRCSVVSNDGKY-VA-YST-ESCVRLHSLDL 433 (708)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~-l~-~~~-d~~i~i~~~~~ 433 (708)
.+..+. ....+.+++|+|||+. ++ ++. ++.|++||..+
T Consensus 306 ------~~~~~~--~~~~~~~~a~spDG~~~ly~s~~~~~~v~v~D~~t 346 (368)
T d1mdah_ 306 ------TSGPIS--NGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAAS 346 (368)
T ss_dssp ------EEECCE--EEEEECEEEECCSSSCEEEEEETTTTEEEEEESSS
T ss_pred ------EeEEec--CCCceeEEEECCCCCEEEEEEeCCCCeEEEEECCC
Confidence 333222 2346788999999974 43 333 89999999876
|
| >d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme family: 3-carboxy-cis,cis-mucoante lactonizing enzyme domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme species: Neurospora crassa [TaxId: 5141]
Probab=99.29 E-value=1.5e-09 Score=105.68 Aligned_cols=253 Identities=11% Similarity=0.016 Sum_probs=146.1
Q ss_pred CceEEEEcCCcEEEEEcCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEE-EecCCCceEEEEeCCCCcEEE--E
Q psy12614 344 STPVSLAKDIQHVLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKM-SAVNNATIRCSVVSNDGKYVA--Y 420 (708)
Q Consensus 344 ~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~s~~g~~l~--~ 420 (708)
...++++++++.+.+...+.+..|.+.... .+... ..........++++++++.+. +
T Consensus 42 ~s~la~s~d~~~ly~~~~~~~~~~~i~~~~--------------------~~~~~~~~~~~~~p~~v~~~~~~~~~~v~~ 101 (365)
T d1jofa_ 42 ISWMTFDHERKNIYGAAMKKWSSFAVKSPT--------------------EIVHEASHPIGGHPRANDADTNTRAIFLLA 101 (365)
T ss_dssp CSEEEECTTSSEEEEEEBTEEEEEEEEETT--------------------EEEEEEEEECCSSGGGGCTTSCCEEEEEEE
T ss_pred CCEEEEcCCCCEEEEEeCCcEEEEEEeCCC--------------------CeEEEeeecCCCCcEEEEECCCCCEEEEEE
Confidence 356999999999998888888888877533 22222 122233456678899998543 3
Q ss_pred Ec--CCceEEEEEEecCCcceeEEeecCC---------cccccceeEEEEEecCCCeEEEEecCCc-EEEe--cCC-CeE
Q psy12614 421 ST--ESCVRLHSLDLDGDKPQISRIKNLP---------APLFKSIFTHVLISADSTLLLAVSLNGP-LYII--DLS-SLE 485 (708)
Q Consensus 421 ~~--d~~i~i~~~~~~~~~~~~~~~~~~~---------~~~~~~~i~~~~~s~d~~~l~~~~~dg~-i~~~--~~~-~~~ 485 (708)
.. .+.+..+.+...........+.... .......+.+++|+|||+++++++.... ||.+ +.. ...
T Consensus 102 a~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~h~h~v~~sPdG~~l~v~d~g~d~v~~~~~~~~g~~~ 181 (365)
T d1jofa_ 102 AKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVE 181 (365)
T ss_dssp CSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEE
T ss_pred ecCCCCEEEEeEccCCCCcceeEeeeecceecCcccCcccCCCCcceEEEECCCCCEEEEeeCCCCEEEEEEccCCCcee
Confidence 32 4555554443221111111110000 0000123456999999999998875444 4444 332 222
Q ss_pred EEEEecCCCCCccCcceEEEEECCCCcEEEEEe-cCCeEEEEECCce--e-----ee--cC------------CCCCCce
Q psy12614 486 IKYCVDPYKSNLMSDVISLVQMSECKQYIVCAD-RKSHVVIWKNGQH--H-----AS--LP------------RYRKPST 543 (708)
Q Consensus 486 ~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-~d~~i~iw~~~~~--~-----~~--~~------------~~~~~v~ 543 (708)
....+..... ......++|+|+++++++.. .+++|.+|+++.. . .. +. .+.....
T Consensus 182 ~~~~~~~~~~---g~gPr~i~f~pdg~~~yv~~e~~~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (365)
T d1jofa_ 182 LVGSVDAPDP---GDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRAD 258 (365)
T ss_dssp EEEEEECSST---TCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEE
T ss_pred eccceeecCC---CCceEEEEECCCCceEEEeccCCCEEEEEEecCCCceEEEEeeeeccccccccccccccccccCCcc
Confidence 2222222211 34678999999999987665 6789999998721 1 01 10 1112345
Q ss_pred EEEEcCCCCEEEEEec-C-----CcEEEEEcCCCCCCchhhhhhccCchhhhcCCCCeeEEEeCC-CCCceEEEE-cCee
Q psy12614 544 AMAIHPTLSTLVTVYS-D-----HRIVEFDLNRKAFTTFSRKLETNHPNEWLSRQLPVLGIEFDP-QDSSLIYLM-DDSA 615 (708)
Q Consensus 544 ~l~~s~d~~~l~~~~~-d-----g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~-~~~~l~~~~-~d~~ 615 (708)
.+.++|||++|+++.. + +.|..|++......... ..............+++|+| +|++|+++. .++.
T Consensus 259 ~i~~spdG~~lyvsnr~~~~~~~~~i~~~~~~~~g~~~~~-----~~~~~~~~~G~~p~~i~~~p~~G~~l~va~~~s~~ 333 (365)
T d1jofa_ 259 VCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQ-----LFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGW 333 (365)
T ss_dssp EEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEE-----EEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCE
T ss_pred ceEECCCCCEEEEEcccCCCccceEEEEEEecCCCceeeE-----eEeeEEEcCCCCccEEEecCCCCCEEEEEeCCCCe
Confidence 7899999999988743 2 23777777643222000 00001111233467799998 889887765 5789
Q ss_pred EEEEecCCC
Q psy12614 616 LCVINKNKS 624 (708)
Q Consensus 616 i~~wd~~~~ 624 (708)
|.+|+++.+
T Consensus 334 v~v~~~~~~ 342 (365)
T d1jofa_ 334 LEIYRWKDE 342 (365)
T ss_dssp EEEEEEETT
T ss_pred EEEEEEeCC
Confidence 999988643
|
| >d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme family: 3-carboxy-cis,cis-mucoante lactonizing enzyme domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme species: Neurospora crassa [TaxId: 5141]
Probab=99.27 E-value=2.8e-09 Score=103.71 Aligned_cols=167 Identities=13% Similarity=0.105 Sum_probs=105.3
Q ss_pred CCceEEEEeCCCCcEEEEEc--CCceEEEEEEecCCcceeEEeecCCcccccceeEEEEEecCCCeEEEEecCCc---EE
Q psy12614 403 NATIRCSVVSNDGKYVAYST--ESCVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVLISADSTLLLAVSLNGP---LY 477 (708)
Q Consensus 403 ~~~i~~~~~s~~g~~l~~~~--d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~~~~~dg~---i~ 477 (708)
...+.+++|+|||+++++.+ ...|.+|+............+..... .....+++|+||++++.+...... +|
T Consensus 144 ~~h~h~v~~sPdG~~l~v~d~g~d~v~~~~~~~~g~~~~~~~~~~~~~---g~gPr~i~f~pdg~~~yv~~e~~~~V~v~ 220 (365)
T d1jofa_ 144 NTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDP---GDHPRWVAMHPTGNYLYALMEAGNRICEY 220 (365)
T ss_dssp TCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSST---TCCEEEEEECTTSSEEEEEETTTTEEEEE
T ss_pred CCcceEEEECCCCCEEEEeeCCCCEEEEEEccCCCceeeccceeecCC---CCceEEEEECCCCceEEEeccCCCEEEEE
Confidence 34578899999999999865 45677777654322222222221221 224566999999999988877665 67
Q ss_pred EecCCCeEEEEEe---cCCC---------CCccCcceEEEEECCCCcEEEEEec------CCeEEEEECCc---ee---e
Q psy12614 478 IIDLSSLEIKYCV---DPYK---------SNLMSDVISLVQMSECKQYIVCADR------KSHVVIWKNGQ---HH---A 533 (708)
Q Consensus 478 ~~~~~~~~~~~~~---~~~~---------~~~~~~~i~~~~~s~~~~~l~~~~~------d~~i~iw~~~~---~~---~ 533 (708)
+++......+... .... ..........+.++|||++|+++.. ...|..|++.+ .. .
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~lyvsnr~~~~~~~~~i~~~~~~~~g~~~~~~~ 300 (365)
T d1jofa_ 221 VIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLF 300 (365)
T ss_dssp EECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEE
T ss_pred EecCCCceEEEEeeeeccccccccccccccccccCCccceEECCCCCEEEEEcccCCCccceEEEEEEecCCCceeeEeE
Confidence 7766543332222 1100 0000234567899999999988752 23477777762 11 1
Q ss_pred --ecCCCCCCceEEEEcC-CCCEEEEEe-cCCcEEEEEcCCCC
Q psy12614 534 --SLPRYRKPSTAMAIHP-TLSTLVTVY-SDHRIVEFDLNRKA 572 (708)
Q Consensus 534 --~~~~~~~~v~~l~~s~-d~~~l~~~~-~dg~i~vwd~~~~~ 572 (708)
..........+++|+| +|++|+++. .++.|.+|+++...
T Consensus 301 ~~~~~~~G~~p~~i~~~p~~G~~l~va~~~s~~v~v~~~~~~~ 343 (365)
T d1jofa_ 301 LSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDEF 343 (365)
T ss_dssp EEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETTE
T ss_pred eeEEEcCCCCccEEEecCCCCCEEEEEeCCCCeEEEEEEeCCc
Confidence 2233445678899998 899888774 57899999987543
|
| >d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: TolB, C-terminal domain family: TolB, C-terminal domain domain: TolB, C-terminal domain species: Escherichia coli [TaxId: 562]
Probab=99.26 E-value=3.6e-09 Score=98.54 Aligned_cols=233 Identities=13% Similarity=0.071 Sum_probs=148.7
Q ss_pred eEEEEeCCCCceeecCccCCCCceEEEEcCCcEEEEEc--C--CeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEE
Q psy12614 323 YLSLSYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQY--T--SHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKM 398 (708)
Q Consensus 323 ~i~iw~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~--~--~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (708)
.|.+.|.++...+.+..........+|||||+.|+... . ..+.+.+...+. ...
T Consensus 20 ~l~i~d~dG~~~~~l~~~~~~~~sP~wSPDGk~IAf~~~~~~~~~~~~~~~~~~~----------------------~~~ 77 (269)
T d2hqsa1 20 ELRVSDYDGYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGA----------------------VRQ 77 (269)
T ss_dssp EEEEEETTSCSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCC----------------------EEE
T ss_pred EEEEEcCCCCCcEEEecCCCceeeeEECCCCCEEEEEEeeccCcceeeeecccCc----------------------eeE
Confidence 57777887777666653445556789999999999742 2 235555554433 233
Q ss_pred EecCCCceEEEEeCCCCcEEEE-Ec-CCceEEEEEEecCCcceeEEeecCCcccccceeEEEEEecCCCeEEEEec-CCc
Q psy12614 399 SAVNNATIRCSVVSNDGKYVAY-ST-ESCVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVLISADSTLLLAVSL-NGP 475 (708)
Q Consensus 399 ~~~~~~~i~~~~~s~~g~~l~~-~~-d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~~~~~-dg~ 475 (708)
...+........|+|+|+.++. .. .+...++........ ... ...... ......+++++..++..+. ++.
T Consensus 78 ~~~~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~~~~~~--~~~---~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~ 150 (269)
T d2hqsa1 78 VASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQ--IRQ---VTDGRS--NNTEPTWFPDSQNLAFTSDQAGR 150 (269)
T ss_dssp EECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCC--EEE---CCCCSS--CEEEEEECTTSSEEEEEECTTSS
T ss_pred EeeeecccccceecCCCCeeeEeeecCCccceeeccccccc--cee---eeeccc--cccccccccccccceecccccCC
Confidence 3456677888999999999997 33 555666655542222 221 111111 2223577888877666554 343
Q ss_pred --EEEecCCCeEEEEEecCCCCCccCcceEEEEECCCCcEEEEEecCC---eEEEEECCceeeecCCCCCCceEEEEcCC
Q psy12614 476 --LYIIDLSSLEIKYCVDPYKSNLMSDVISLVQMSECKQYIVCADRKS---HVVIWKNGQHHASLPRYRKPSTAMAIHPT 550 (708)
Q Consensus 476 --i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~---~i~iw~~~~~~~~~~~~~~~v~~l~~s~d 550 (708)
++..+........ +. .. ........|+|++++++..+.++ .+.+.+.......+..+........||||
T Consensus 151 ~~i~~~~~~~~~~~~-~~---~~--~~~~~~~~~spdg~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~p~~SPD 224 (269)
T d2hqsa1 151 PQVYKVNINGGAPQR-IT---WE--GSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLSSTFLDETPSLAPN 224 (269)
T ss_dssp CEEEEEETTSSCCEE-CC---CS--SSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEEECCCSSSCEEEEECTT
T ss_pred ceEeeeeccccccee-ee---cc--cccccccccccccceeEEEeecCCceeeeEeecccccceEeecCccccceEECCC
Confidence 6666544322221 11 11 45677889999999999877554 55555665555555566677888999999
Q ss_pred CCEEEEEecC---CcEEEEEcCCCCCCchhhhhhccCchhhhcCCCCeeEEEeCC
Q psy12614 551 LSTLVTVYSD---HRIVEFDLNRKAFTTFSRKLETNHPNEWLSRQLPVLGIEFDP 602 (708)
Q Consensus 551 ~~~l~~~~~d---g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~ 602 (708)
|+.|+..+.. ..|++++++++... .+....+.+...+|||
T Consensus 225 G~~i~f~s~~~~~~~l~~~~~dg~~~~------------~lt~~~g~~~~p~WSP 267 (269)
T d2hqsa1 225 GTMVIYSSSQGMGSVLNLVSTDGRFKA------------RLPATDGQVKFPAWSP 267 (269)
T ss_dssp SSEEEEEEEETTEEEEEEEETTSCCEE------------ECCCSSSEEEEEEECC
T ss_pred CCEEEEEEcCCCCcEEEEEECCCCCEE------------EEeCCCCcEEeEEeCC
Confidence 9999876653 46899999887644 3334556788889998
|
| >d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.22 E-value=7.3e-09 Score=103.86 Aligned_cols=346 Identities=11% Similarity=0.020 Sum_probs=185.0
Q ss_pred EEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEeccc-ccccEEEEEECCCCCEEEEecC---------C-eEEEEEcCC
Q psy12614 117 LSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDR-QQGRILCTAWHSSGDYLVTGCA---------A-AVRVWDIHK 185 (708)
Q Consensus 117 ~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~v~~~~~s~d~~~l~~~~~---------d-~i~iwd~~~ 185 (708)
..|.+++.++.. ..+|.|.+||+.+++......... ..-.+....||||+++++.... . .+.++|+.+
T Consensus 22 ~~W~~~~~~~~~-~~~g~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~SpD~~~vl~~~~~~~~~r~s~~~~~~i~d~~~ 100 (465)
T d1xfda1 22 AKWISDTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPH 100 (465)
T ss_dssp CCBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSS
T ss_pred CEEeCCCcEEEE-eCCCcEEEEECCCCCEEEEEcCccccccccceeEECCCCCeEEEEEcccceeEeeccccEEEEEccC
Confidence 357788876654 567889999999876542122111 2235677889999999887642 3 688999998
Q ss_pred CceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCeeEEEee-ccccC-----------------
Q psy12614 186 GHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDVK-THKKD----------------- 246 (708)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~~-~~~~~----------------- 246 (708)
+......... .....+....|+|||+ ++. -.++.|.+.+..++..++... +....
T Consensus 101 ~~~~~l~~~~-----~~~~~l~~~~wSPDG~~iaf-v~~~nl~~~~~~~~~~~~lt~~g~~~~i~nG~~d~vyeee~~~~ 174 (465)
T d1xfda1 101 GDPQSLDPPE-----VSNAKLQYAGWGPKGQQLIF-IFENNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKT 174 (465)
T ss_dssp CCCEECCCTT-----CCSCCCSBCCBCSSTTCEEE-EETTEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSS
T ss_pred CceeeccCcc-----CCccccceeeeccCCceEEE-EecceEEEEecCCCceEEEecccCcceeeccccchhhhhhhccc
Confidence 8764332211 1134456688999996 444 346789999987776554432 11111
Q ss_pred eEEEEEeCCCCEEEEEecC-CeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEEEcCCCe
Q psy12614 247 ILALTVSEDENYLYCAGVD-PTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSGGLDSY 323 (708)
Q Consensus 247 i~~~~~s~~~~~l~~~~~d-g~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~~~d~~ 323 (708)
-.++.|||||++||....| ..+..+.+.. .. ......+..+.+. |.. .....
T Consensus 175 ~~a~~WSPDgk~iaf~~~D~s~V~~~~~~~--------~~-------------~~~~p~~~~~~Yp~~G~~----np~~~ 229 (465)
T d1xfda1 175 HIAHWWSPDGTRLAYAAINDSRVPIMELPT--------YT-------------GSIYPTVKPYHYPKAGSE----NPSIS 229 (465)
T ss_dssp SEEEEECTTSSEEEEEEEECTTSCEEEECC--------CS-------------SSSSCCCEEEECCBTTSC----CCEEE
T ss_pred cceEEECCCCCeEEEEEecccccceeeccc--------cc-------------ccccceeeeeeccccCCC----CCcee
Confidence 1467899999999987543 4455554432 00 0001112222222 111 01124
Q ss_pred EEEEeCCCCceeecCccCC-------CCceEEEEcCCcEEEEEcC---C--eEEEEEecCCCCCCCCCCCCCCcccCCCC
Q psy12614 324 LSLSYYPPKTLVKYPCTLA-------QSTPVSLAKDIQHVLLQYT---S--HLELWSLGSAQSTDLSSHSNTTGVPLLSF 391 (708)
Q Consensus 324 i~iw~~~~~~~~~~~~~~~-------~~~~~~~s~~~~~l~~~~~---~--~i~i~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (708)
+.++|+.++.......+.. ....+.+++++++++...+ + .+.++|..++.
T Consensus 230 l~v~d~~~~~~~~~~~~~~~~~~~~~y~~~~~W~~d~~~~~~~~nR~q~~~~i~~~d~~tg~------------------ 291 (465)
T d1xfda1 230 LHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGV------------------ 291 (465)
T ss_dssp EEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCC------------------
T ss_pred EEEEecCCCcEEEEEeccCcCccccceeeeeEEcCCCeEEEEEEccccccceEEEEcCCCCc------------------
Confidence 6677776654222110111 1245788999997776422 2 46777777655
Q ss_pred ceEEEEEEecCCCce----EEEEeCCCCcEEEE---Ec-CC--ceEEEEEEecCCcceeEEeecCCcccccceeEE-EEE
Q psy12614 392 PRLIVKMSAVNNATI----RCSVVSNDGKYVAY---ST-ES--CVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTH-VLI 460 (708)
Q Consensus 392 ~~~~~~~~~~~~~~i----~~~~~s~~g~~l~~---~~-d~--~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~ 460 (708)
............| ....|+|||+.++. .. +| .+....+........-..+..+... ...|+. ++|
T Consensus 292 --~~~~~~e~~~~wv~~~~~~p~~~~dg~~~~fi~~se~~g~~~ly~~~~~~~~~~~~~~~~~~LT~G--~w~V~~i~~~ 367 (465)
T d1xfda1 292 --CTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSG--DWDVTKILAY 367 (465)
T ss_dssp --EEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCS--SSCEEEEEEE
T ss_pred --EEEEEEEcCCceEeccCCceeEccCCCeeEEEEeeeecccCceEEEEeccccccCCCceeEEeccC--CceEEEEEEE
Confidence 1111111222222 24578999985442 32 44 3444443321110000000112221 223333 478
Q ss_pred ecCCCeEEEEec-CCc----EEEecCCCeEEEEEecCCCCCccCcceEEEEECCCCcEEEEEe
Q psy12614 461 SADSTLLLAVSL-NGP----LYIIDLSSLEIKYCVDPYKSNLMSDVISLVQMSECKQYIVCAD 518 (708)
Q Consensus 461 s~d~~~l~~~~~-dg~----i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~ 518 (708)
+++++.+...+. ++. ||.+.........++...... ......+.|||++++++...
T Consensus 368 d~~~~~vyF~a~~~~p~~~hly~v~l~g~~~~~~lt~~~~~--~~~~~~~~~S~~~~y~v~~~ 428 (465)
T d1xfda1 368 DEKGNKIYFLSTEDLPRRRQLYSANTVGNFNRQCLSCDLVE--NCTYFSASFSHSMDFFLLKC 428 (465)
T ss_dssp ETTTTEEEEEESSSCTTCCEEEEECSSTTCCCBCSSTTSSS--SCCCCEEEECTTSSEEEEEC
T ss_pred cCCCCEEEEEEeCCCCCceEEEEEECCCCCcceeeccccCC--CCCEEEEEECCCCCEEEEEe
Confidence 888887765443 322 888865432333333322222 34566888999999888554
|
| >d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Brain tumor cg10719-pa species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.20 E-value=2.3e-08 Score=93.08 Aligned_cols=236 Identities=10% Similarity=0.106 Sum_probs=165.3
Q ss_pred cEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecC----CCCCcEEEEEEe---CCEEEEE-cCCCcEEEEECC
Q psy12614 28 VINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGD----PLSNSIECLTWF---NDRLFSG-GLQGFVNEYDMR 99 (708)
Q Consensus 28 ~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h----~~~~~v~~l~~~---~~~l~s~-~~d~~i~vwd~~ 99 (708)
....++++|+|+++++-..++.|++||.+ ++.+. .+... .....-..+++. +..+++. +.++.|..++.
T Consensus 24 ~P~gvavd~dg~i~VaD~~n~rI~v~d~~-G~~~~-~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~i~~~~~- 100 (279)
T d1q7fa_ 24 EPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKF-QFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQ- 100 (279)
T ss_dssp CEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEE-EECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEECT-
T ss_pred CccEEEEcCCCCEEEEECCCCEEEEEeCC-CCEEE-EecccCCCcccccccccccccccccccceeccCCccccccccc-
Confidence 46899999999988777778899999976 55554 34211 101234566665 4445443 45567777775
Q ss_pred CCeEeEEEe-ecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-e
Q psy12614 100 RLNIKSSTA-VTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-A 177 (708)
Q Consensus 100 ~~~~~~~~~-~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~ 177 (708)
.++....+. ........+++.++|.++++....+.+.+++... +.+.......+......+++.++++.+++.... .
T Consensus 101 ~g~~~~~~~~~~~~~p~~~avd~~G~i~v~~~~~~~~~~~~~~g-~~~~~~g~~~~~~~~~~i~~d~~g~i~v~d~~~~~ 179 (279)
T d1q7fa_ 101 YGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNG-NVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHC 179 (279)
T ss_dssp TSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTS-CEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTE
T ss_pred cccceeecCCCcccccceeccccCCcEEEEeeccceeeEeccCC-ceeecccccccccccceeeeccceeEEeeeccccc
Confidence 455555554 3345678999999999888877778888887654 444222334556778899999999887777777 9
Q ss_pred EEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEEEEcC--CCcEEEEeCCCCeeEEEeecc--ccCeEEEEEe
Q psy12614 178 VRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDS--GGFVRFWDGKTGVQWSDVKTH--KKDILALTVS 253 (708)
Q Consensus 178 i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~--dg~i~~wd~~~~~~~~~~~~~--~~~i~~~~~s 253 (708)
|.+||. +|+.+.++... +.......+++.++|+++.+.. ++.|.+|+ .+|+.+.++... ......+++.
T Consensus 180 V~~~d~-~G~~~~~~g~~-----g~~~~P~giavD~~G~i~Vad~~~~~~v~~f~-~~G~~~~~~~~~~~~~~p~~vav~ 252 (279)
T d1q7fa_ 180 VKVFNY-EGQYLRQIGGE-----GITNYPIGVGINSNGEILIADNHNNFNLTIFT-QDGQLISALESKVKHAQCFDVALM 252 (279)
T ss_dssp EEEEET-TCCEEEEESCT-----TTSCSEEEEEECTTCCEEEEECSSSCEEEEEC-TTSCEEEEEEESSCCSCEEEEEEE
T ss_pred eeeeec-CCceeeeeccc-----ccccCCcccccccCCeEEEEECCCCcEEEEEC-CCCCEEEEEeCCCCCCCEeEEEEe
Confidence 999996 56776666422 2355678999999998655543 44699998 468877776432 3457899999
Q ss_pred CCCCEEEEEecCCeEEEEEccC
Q psy12614 254 EDENYLYCAGVDPTVVCFQRTR 275 (708)
Q Consensus 254 ~~~~~l~~~~~dg~i~iw~~~~ 275 (708)
|||+ |++++.++.|++|....
T Consensus 253 ~dG~-l~V~~~n~~v~~fr~~~ 273 (279)
T d1q7fa_ 253 DDGS-VVLASKDYRLYIYRYVQ 273 (279)
T ss_dssp TTTE-EEEEETTTEEEEEECSC
T ss_pred CCCc-EEEEeCCCeEEEEEeee
Confidence 9996 55566789999999876
|
| >d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.16 E-value=7.5e-09 Score=103.80 Aligned_cols=338 Identities=13% Similarity=0.061 Sum_probs=177.5
Q ss_pred EEEccCCEEEEEcCCCcEEEEeCCCCeeEEEeec---cccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCC
Q psy12614 209 VAFCADFTIITGDSGGFVRFWDGKTGVQWSDVKT---HKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGP 285 (708)
Q Consensus 209 ~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~---~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~ 285 (708)
..|.+++.++.-..+|.|.+||+.+++....+.. ....+....+|||+++++....-. ++|...
T Consensus 22 ~~W~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~SpD~~~vl~~~~~~--~~~r~s----------- 88 (465)
T d1xfda1 22 AKWISDTEFIYREQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVE--PIYQHS----------- 88 (465)
T ss_dssp CCBSSSSCBCCCCSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCC--CCSSSC-----------
T ss_pred CEEeCCCcEEEEeCCCcEEEEECCCCCEEEEEcCccccccccceeEECCCCCeEEEEEccc--ceeEee-----------
Confidence 3577888766667789999999988876443332 234667888999999987664321 112111
Q ss_pred CCCCcceEEeEEEeccccceEEEEEeCCEEEEEcCCCeEEEEeCCCCceeecCcc---CCCCceEEEEcCCcEEEEEcCC
Q psy12614 286 EQGSSVWVRSVNRVIHEGDVKSLALHGNRLYSGGLDSYLSLSYYPPKTLVKYPCT---LAQSTPVSLAKDIQHVLLQYTS 362 (708)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~---~~~~~~~~~s~~~~~l~~~~~~ 362 (708)
..+.+.++|+.++....+... ........|||||+.++...++
T Consensus 89 ----------------------------------~~~~~~i~d~~~~~~~~l~~~~~~~~~l~~~~wSPDG~~iafv~~~ 134 (465)
T d1xfda1 89 ----------------------------------YTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFEN 134 (465)
T ss_dssp ----------------------------------CCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEETT
T ss_pred ----------------------------------ccccEEEEEccCCceeeccCccCCccccceeeeccCCceEEEEecc
Confidence 124556666666654444311 1223357899999999999899
Q ss_pred eEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEe------cCCCceEEEEeCCCCcEEEEE--cCCceEEEEEEec
Q psy12614 363 HLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSA------VNNATIRCSVVSNDGKYVAYS--TESCVRLHSLDLD 434 (708)
Q Consensus 363 ~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~i~~~~~s~~g~~l~~~--~d~~i~i~~~~~~ 434 (708)
.|.+.+...+......... ....+..-.. .....-.++.|||||++||.. ++..+..+.+...
T Consensus 135 nl~~~~~~~~~~~~lt~~g---------~~~~i~nG~~d~vyeee~~~~~~a~~WSPDgk~iaf~~~D~s~V~~~~~~~~ 205 (465)
T d1xfda1 135 NIYYCAHVGKQAIRVVSTG---------KEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTY 205 (465)
T ss_dssp EEEEESSSSSCCEEEECCC---------BTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCC
T ss_pred eEEEEecCCCceEEEeccc---------CcceeeccccchhhhhhhccccceEEECCCCCeEEEEEecccccceeecccc
Confidence 9988887665410000000 0000000000 001112467799999999984 3666666655421
Q ss_pred CCc--ceeEEe-----------------e---------cCCcc--cc-cceeEEEEEecCCCeEEEEecCCc------EE
Q psy12614 435 GDK--PQISRI-----------------K---------NLPAP--LF-KSIFTHVLISADSTLLLAVSLNGP------LY 477 (708)
Q Consensus 435 ~~~--~~~~~~-----------------~---------~~~~~--~~-~~~i~~~~~s~d~~~l~~~~~dg~------i~ 477 (708)
... .....+ . ..+.. .. ..-+..+.|+||+++++....... ++
T Consensus 206 ~~~~~p~~~~~~Yp~~G~~np~~~l~v~d~~~~~~~~~~~~~~~~~~~~~y~~~~~W~~d~~~~~~~~nR~q~~~~i~~~ 285 (465)
T d1xfda1 206 TGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLC 285 (465)
T ss_dssp SSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEE
T ss_pred cccccceeeeeeccccCCCCCceeEEEEecCCCcEEEEEeccCcCccccceeeeeEEcCCCeEEEEEEccccccceEEEE
Confidence 100 000000 0 01110 00 223566899999987766544332 34
Q ss_pred EecCCCeEEEEEecCCCCCccCcceEEEEECCCCcEEEE---EecCC--eEEEEECC--------ceeeecCCCCCCceE
Q psy12614 478 IIDLSSLEIKYCVDPYKSNLMSDVISLVQMSECKQYIVC---ADRKS--HVVIWKNG--------QHHASLPRYRKPSTA 544 (708)
Q Consensus 478 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~---~~~d~--~i~iw~~~--------~~~~~~~~~~~~v~~ 544 (708)
+..++.+..+..-...... ...-....|+|||+.++. ...+| .++...+. +....+....-.|+.
T Consensus 286 d~~tg~~~~~~~e~~~~wv--~~~~~~p~~~~dg~~~~fi~~se~~g~~~ly~~~~~~~~~~~~~~~~~~LT~G~w~V~~ 363 (465)
T d1xfda1 286 DATTGVCTKKHEDESEAWL--HRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTK 363 (465)
T ss_dssp ETTTCCEEEEEEEECSSCC--CCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEE
T ss_pred cCCCCcEEEEEEEcCCceE--eccCCceeEccCCCeeEEEEeeeecccCceEEEEeccccccCCCceeEEeccCCceEEE
Confidence 4455544433332221111 111234689999985432 22333 34433321 112244444445666
Q ss_pred E-EEcCCCCEEEE-EecC--CcEEEEEc--CCCCCCchhhhhhccCchhhhcCCCCeeEEEeCCCCCceEEEEc
Q psy12614 545 M-AIHPTLSTLVT-VYSD--HRIVEFDL--NRKAFTTFSRKLETNHPNEWLSRQLPVLGIEFDPQDSSLIYLMD 612 (708)
Q Consensus 545 l-~~s~d~~~l~~-~~~d--g~i~vwd~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~~~~l~~~~~ 612 (708)
+ +|..+++.+.. +..+ +.-.+|.+ ..+... ..+... ........++.|||++++++..+.
T Consensus 364 i~~~d~~~~~vyF~a~~~~p~~~hly~v~l~g~~~~-------~~lt~~-~~~~~~~~~~~~S~~~~y~v~~~s 429 (465)
T d1xfda1 364 ILAYDEKGNKIYFLSTEDLPRRRQLYSANTVGNFNR-------QCLSCD-LVENCTYFSASFSHSMDFFLLKCE 429 (465)
T ss_dssp EEEEETTTTEEEEEESSSCTTCCEEEEECSSTTCCC-------BCSSTT-SSSSCCCCEEEECTTSSEEEEECC
T ss_pred EEEEcCCCCEEEEEEeCCCCCceEEEEEECCCCCcc-------eeeccc-cCCCCCEEEEEECCCCCEEEEEee
Confidence 5 68888877654 4333 23345544 433222 011111 123446778999999999875554
|
| >d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: TolB, C-terminal domain family: TolB, C-terminal domain domain: TolB, C-terminal domain species: Escherichia coli [TaxId: 562]
Probab=99.10 E-value=5.3e-08 Score=90.31 Aligned_cols=229 Identities=13% Similarity=0.050 Sum_probs=143.4
Q ss_pred cEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCC---cEEEEEccCCcEEEEEecccccccEEEEEECCCCC
Q psy12614 92 FVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQG---HINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGD 168 (708)
Q Consensus 92 ~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~---~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~ 168 (708)
.|.+-|...+.... +..+...+.+.+|||||+.||...... .+.+.+..++... .+..+.+......|+|+|+
T Consensus 20 ~l~i~d~dG~~~~~-l~~~~~~~~sP~wSPDGk~IAf~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~spdg~ 95 (269)
T d2hqsa1 20 ELRVSDYDGYNQFV-VHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR---QVASFPRHNGAPAFSPDGS 95 (269)
T ss_dssp EEEEEETTSCSCEE-EEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE---EEECCSSCEEEEEECTTSS
T ss_pred EEEEEcCCCCCcEE-EecCCCceeeeEECCCCCEEEEEEeeccCcceeeeecccCcee---EEeeeecccccceecCCCC
Confidence 47777776544444 444567788999999999999875533 4777777777763 4555677888999999999
Q ss_pred EEEEecCC--e--EEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE--EEEEcCCC--cEEEEeCCCCeeEEEe
Q psy12614 169 YLVTGCAA--A--VRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT--IITGDSGG--FVRFWDGKTGVQWSDV 240 (708)
Q Consensus 169 ~l~~~~~d--~--i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--l~~~~~dg--~i~~wd~~~~~~~~~~ 240 (708)
.++..... . +..+............ . ........+++++. +++...+| .|...++..+... .+
T Consensus 96 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-------~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~~~~~~~-~~ 166 (269)
T d2hqsa1 96 KLAFALSKTGSLNLYVMDLASGQIRQVTD-G-------RSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQ-RI 166 (269)
T ss_dssp EEEEEECTTSSCEEEEEETTTCCEEECCC-C-------SSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCE-EC
T ss_pred eeeEeeecCCccceeecccccccceeeee-c-------cccccccccccccccceecccccCCceEeeeecccccce-ee
Confidence 99876543 2 3333333332222211 1 33344556677663 55555555 4666676655443 33
Q ss_pred eccccCeEEEEEeCCCCEEEEEecCC-e--EEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEE
Q psy12614 241 KTHKKDILALTVSEDENYLYCAGVDP-T--VVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRL 315 (708)
Q Consensus 241 ~~~~~~i~~~~~s~~~~~l~~~~~dg-~--i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l 315 (708)
...........++|+++.++..+.++ . +.+.+... +. .....+........|+ |+.|
T Consensus 167 ~~~~~~~~~~~~spdg~~~~~~~~~~~~~~i~~~~~~~--------~~----------~~~~~~~~~~~~p~~SPDG~~i 228 (269)
T d2hqsa1 167 TWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLAT--------GG----------VQVLSSTFLDETPSLAPNGTMV 228 (269)
T ss_dssp CCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTT--------CC----------EEECCCSSSCEEEEECTTSSEE
T ss_pred ecccccccccccccccceeEEEeecCCceeeeEeeccc--------cc----------ceEeecCccccceEECCCCCEE
Confidence 34566777889999999988776554 3 44444444 22 2333445566777888 7877
Q ss_pred EEEcC---CCeEEEEeCCCCceeecCccCCCCceEEEEc
Q psy12614 316 YSGGL---DSYLSLSYYPPKTLVKYPCTLAQSTPVSLAK 351 (708)
Q Consensus 316 ~s~~~---d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s~ 351 (708)
+..+. ...|.++++++....++..........+|||
T Consensus 229 ~f~s~~~~~~~l~~~~~dg~~~~~lt~~~g~~~~p~WSP 267 (269)
T d2hqsa1 229 IYSSSQGMGSVLNLVSTDGRFKARLPATDGQVKFPAWSP 267 (269)
T ss_dssp EEEEEETTEEEEEEEETTSCCEEECCCSSSEEEEEEECC
T ss_pred EEEEcCCCCcEEEEEECCCCCEEEEeCCCCcEEeEEeCC
Confidence 64443 3578899999888777763333334456665
|
| >d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Serine/threonine-protein kinase PknD species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.10 E-value=1.1e-08 Score=94.09 Aligned_cols=235 Identities=13% Similarity=-0.024 Sum_probs=148.9
Q ss_pred CcEEEEEEcCCCCEEEEE-eCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECCCCeE
Q psy12614 27 KVINCIACEPKSSRLAVS-RADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMRRLNI 103 (708)
Q Consensus 27 ~~v~~~~~s~~~~~la~~-~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~~~ 103 (708)
..-..++++++|++.++. +..+.|..++............+. .....++++ ++.+++....+.+++++-.++..
T Consensus 14 ~~P~~vavd~dG~i~v~~~~~~~~i~~~~~~~~~~~~~~~~~~---~~p~gvav~~~g~i~v~d~~~~~i~~~~~~~~~~ 90 (260)
T d1rwia_ 14 LSPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGL---YQPQGLAVDGAGTVYVTDFNNRVVTLAAGSNNQT 90 (260)
T ss_dssp CCEEEEEECTTCCEEEEECSSSCEEEEEC----CEEECCCCSC---CSCCCEEECTTCCEEEEETTTEEEEECTTCSCCE
T ss_pred CCCCEEEEcCCCCEEEEEcCCCCEEEEEcCCCceEEEeccCCc---cCceEEEEcCCCCEEEeeeeeceeeeeeecccee
Confidence 345799999999966654 455778887776654332122222 345778888 66666666666666666555544
Q ss_pred eEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEE
Q psy12614 104 KSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWD 182 (708)
Q Consensus 104 ~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd 182 (708)
+..... .....++++.++++++++-.....+..++....... ............+++.++++.+++...+ .|..++
T Consensus 91 ~~~~~~-~~~p~~iavd~~g~i~v~d~~~~~~~~~~~~~~~~~--~~~~~~~~~p~~i~~~~~g~~~v~~~~~~~i~~~d 167 (260)
T d1rwia_ 91 VLPFDG-LNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQT--VLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLE 167 (260)
T ss_dssp ECCCCS-CCSEEEEEECTTCCEEEEEGGGTEEEEECTTCSSCE--ECCCCSCCSCCEEEECTTCCEEEEEGGGTEEEEEC
T ss_pred eeeeee-eeecccccccccceeEeeccccccccccccccceee--eeeecccCCcceeeecCCCCEeeeccccccccccc
Confidence 433322 356789999999998777666677777776655443 1111223345789999999987777777 899999
Q ss_pred cCCCceEEEEEecccCCCCCceeEEEEEEccCCEEE-EEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEE
Q psy12614 183 IHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTII-TGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYC 261 (708)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~-~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~ 261 (708)
....... .+... .......+++.++|.|. +....+.|..++.............-.....|+++++|+.+++
T Consensus 168 ~~~~~~~-~~~~~------~~~~p~gi~~d~~g~l~vsd~~~~~i~~~~~~~~~~~~~~~~~~~~P~~i~~d~~g~l~va 240 (260)
T d1rwia_ 168 AESNNQV-VLPFT------DITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVA 240 (260)
T ss_dssp TTTCCEE-ECCCS------SCCSEEEEEECTTCCEEEEETTTTEEEEECTTCSCCEECCCCSCCCEEEEEECTTCCEEEE
T ss_pred cccceee-eeecc------ccCCCccceeeeeeeeeeeecCCCEEEEEeCCCCeEEEEccCCCCCeEEEEEeCCCCEEEE
Confidence 7654433 22211 14557899999999755 4555678888886544322222223346689999999987777
Q ss_pred EecCCeEEEEEcc
Q psy12614 262 AGVDPTVVCFQRT 274 (708)
Q Consensus 262 ~~~dg~i~iw~~~ 274 (708)
-..++.|+.++..
T Consensus 241 d~~~~rI~~i~~~ 253 (260)
T d1rwia_ 241 DRGNDRVVKLTSL 253 (260)
T ss_dssp EGGGTEEEEECCC
T ss_pred ECCCCEEEEEeCC
Confidence 6666767666544
|
| >d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP) species: Squid (Loligo vulgaris) [TaxId: 6622]
Probab=99.06 E-value=1.2e-07 Score=89.43 Aligned_cols=242 Identities=10% Similarity=0.059 Sum_probs=153.4
Q ss_pred cEEEEEEcCCCCEEEEEeC-------CCcEEEEeCCCCCeEEEEEecCC--CCCcEEEEEEe--CCEEEEEcCCCcEEEE
Q psy12614 28 VINCIACEPKSSRLAVSRA-------DQSIEIWDISETPHVDRVFIGDP--LSNSIECLTWF--NDRLFSGGLQGFVNEY 96 (708)
Q Consensus 28 ~v~~~~~s~~~~~la~~~~-------dg~v~iwd~~~~~~~~~~~~~h~--~~~~v~~l~~~--~~~l~s~~~d~~i~vw 96 (708)
..-.++|.|+|++.++... +|+|..||..++.... ...... ..+.-..++|. ++.|+++...+.|...
T Consensus 19 g~EGpa~d~dG~ly~~~~~~~~~~~~~g~I~r~d~~~~~~~~-~~~~~~~~~~g~P~Gl~~~~dg~~l~vad~~~~i~~~ 97 (314)
T d1pjxa_ 19 GAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTV-ICKPEVNGYGGIPAGCQCDRDANQLFVADMRLGLLVV 97 (314)
T ss_dssp TCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEE-EECCEETTEECCEEEEEECSSSSEEEEEETTTEEEEE
T ss_pred CCeEeEEeCCCCEEEEECccccccccCCEEEEEECCCCcEEE-EECCccccCCCcceeEEEeCCCCEEEEEECCCeEEEE
Confidence 3557899999998776432 4679999998876543 222111 01335789998 7788888877889999
Q ss_pred ECCCCeEeEEEeecCC----ceEEEEEecCCCEEEEEeC---------------CCcEEEEEccCCcEEEEEeccccccc
Q psy12614 97 DMRRLNIKSSTAVTSG----TCWCLSVHKKKRLLAAGTE---------------QGHINLFQISDEGLLYEKLLDRQQGR 157 (708)
Q Consensus 97 d~~~~~~~~~~~~~~~----~v~~~~~s~~~~~la~~~~---------------d~~i~iwd~~~~~~~~~~~~~~~~~~ 157 (708)
+.+.+..........+ ..+.+++.++|++.++-.. .|.|..++.+ ++.. . +...-..
T Consensus 98 ~~~g~~~~~~~~~~~g~~~~~pndl~~d~~G~lyvtd~~~~~~~~~~~~~~~~~~G~v~~~~~d-g~~~--~-~~~~~~~ 173 (314)
T d1pjxa_ 98 QTDGTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMI--Q-VDTAFQF 173 (314)
T ss_dssp ETTSCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEE--E-EEEEESS
T ss_pred eCCCcEEEEEeccccccccCCCcEEEECCCCCEEEecCccCcccccccceeccCCceEEEEeec-Ccee--E-eeCCcce
Confidence 9877543322221111 3577999999988776321 2334444433 3332 1 1112233
Q ss_pred EEEEEECCCCC----EEEEe-cCC-eEEEEEcCCCceEEEEEec-ccCCCCCceeEEEEEEccCCEE-EEEcCCCcEEEE
Q psy12614 158 ILCTAWHSSGD----YLVTG-CAA-AVRVWDIHKGHAIHKMSLD-KSSKFSKNTAVWCVAFCADFTI-ITGDSGGFVRFW 229 (708)
Q Consensus 158 v~~~~~s~d~~----~l~~~-~~d-~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~l-~~~~~dg~i~~w 229 (708)
...++|+|+++ .|+.+ +.. .|..|++.....+...... .... ........+++.++|+| ++....+.|.+|
T Consensus 174 pNGi~~~~d~d~~~~~lyv~d~~~~~i~~~d~~~~g~~~~~~~~~~~~~-~~~~~pdGiavD~~GnlyVa~~~~g~I~~~ 252 (314)
T d1pjxa_ 174 PNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPG-THEGGADGMDFDEDNNLLVANWGSSHIEVF 252 (314)
T ss_dssp EEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCC-CSSCEEEEEEEBTTCCEEEEEETTTEEEEE
T ss_pred eeeeEECCCCCcceeEEEEEeecccceEEeeccCccccceeeEEEEccc-cccccceeeEEecCCcEEEEEcCCCEEEEE
Confidence 46789988775 45444 455 8888887644333221111 0000 11334678999999984 555567889999
Q ss_pred eCCCCeeEEEeeccccCeEEEEEeCCCCEEE-EEecCCeEEEEEccC
Q psy12614 230 DGKTGVQWSDVKTHKKDILALTVSEDENYLY-CAGVDPTVVCFQRTR 275 (708)
Q Consensus 230 d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~-~~~~dg~i~iw~~~~ 275 (708)
|.+.++.+..+.......++++|.||++.|+ +.+.+|.|..+++..
T Consensus 253 dp~~g~~~~~i~~p~~~~t~~afg~d~~~lyVt~~~~g~i~~~~~~~ 299 (314)
T d1pjxa_ 253 GPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp CTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred eCCCCEEEEEEECCCCCEEEEEEeCCCCEEEEEECCCCcEEEEECCC
Confidence 9988877777766667889999999997665 455678888888765
|
| >d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: All0351-like domain: Hypothetical protein All0351 homologue species: Nostoc punctiforme [TaxId: 272131]
Probab=99.05 E-value=2.5e-08 Score=94.18 Aligned_cols=226 Identities=9% Similarity=-0.013 Sum_probs=150.1
Q ss_pred CcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcCCCcEEEEECCCCeE-
Q psy12614 27 KVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGLQGFVNEYDMRRLNI- 103 (708)
Q Consensus 27 ~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~d~~i~vwd~~~~~~- 103 (708)
..+..++++|||+++++...+++|..||...... .+.... ..+.+++|+ |+.+++...++.+..|+......
T Consensus 28 ~~~e~iAv~pdG~l~vt~~~~~~I~~i~p~g~~~---~~~~~~--~~~~gla~~~dG~l~v~~~~~~~~~~~~~~~~~~~ 102 (302)
T d2p4oa1 28 TFLENLASAPDGTIFVTNHEVGEIVSITPDGNQQ---IHATVE--GKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGT 102 (302)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTCCEE---EEEECS--SEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSC
T ss_pred CCcCCEEECCCCCEEEEeCCCCEEEEEeCCCCEE---EEEcCC--CCcceEEEcCCCCeEEEecCCceEEEEEecccccc
Confidence 3688999999999999998899998888664322 445555 789999999 88888888888888887654321
Q ss_pred eEEEe--ecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEec--------ccccccEEEEEECCCCCEEE-E
Q psy12614 104 KSSTA--VTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLL--------DRQQGRILCTAWHSSGDYLV-T 172 (708)
Q Consensus 104 ~~~~~--~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~--------~~~~~~v~~~~~s~d~~~l~-~ 172 (708)
...+. ........+++.++++++++.+.++.+..++..++.......- .........+.+. +..++ +
T Consensus 103 ~~~~~~~~~~~~~n~i~~~~~g~~~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ngi~~~--~~~l~~~ 180 (302)
T d2p4oa1 103 VETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKRF--GNFLYVS 180 (302)
T ss_dssp EEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEE--TTEEEEE
T ss_pred eeeccccCCccccceeEEccCCCEEeeccccccceeeeccCCcceeEecCCccceeeccCccccccccccc--CCceeee
Confidence 11221 3445688999999999988888888898888887754321110 0112235566665 34444 4
Q ss_pred ecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEE-EEEcCCCcEEEEeCCCCeeE--EEeeccccCeE
Q psy12614 173 GCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTI-ITGDSGGFVRFWDGKTGVQW--SDVKTHKKDIL 248 (708)
Q Consensus 173 ~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l-~~~~~dg~i~~wd~~~~~~~--~~~~~~~~~i~ 248 (708)
.+.. .|..++.............. .......+++.++|.+ ++...++.|..++.. ++.. ......-...+
T Consensus 181 ~~~~~~i~~~~~~~~~~~~~~~~~~-----~~~~pdgia~d~dG~l~va~~~~~~V~~i~p~-G~~~~~~~~~~~~~~pt 254 (302)
T d2p4oa1 181 NTEKMLLLRIPVDSTDKPGEPEIFV-----EQTNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTIIAQAEQGVIGST 254 (302)
T ss_dssp ETTTTEEEEEEBCTTSCBCCCEEEE-----ESCCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEEEECGGGTCTTEE
T ss_pred cCCCCeEEecccccccccccccccc-----CCCCCcceEECCCCCEEEEEcCCCcEEEECCC-CCEEEEEecCCCCCCce
Confidence 4444 88888876543322111110 0233457999999984 455568899999875 4433 23333445678
Q ss_pred EEEE---eCCCCEEEEEecC
Q psy12614 249 ALTV---SEDENYLYCAGVD 265 (708)
Q Consensus 249 ~~~~---s~~~~~l~~~~~d 265 (708)
+++| ++|++.|+.++..
T Consensus 255 ~vafg~~~~D~~~Lyvtt~~ 274 (302)
T d2p4oa1 255 AVAFGQTEGDCTAIYVVTNG 274 (302)
T ss_dssp EEEECCSTTTTTEEEEEECT
T ss_pred EEEEcCCCCCCCEEEEECCC
Confidence 9999 6788888877654
|
| >d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: All0351-like domain: Hypothetical protein All0351 homologue species: Nostoc punctiforme [TaxId: 272131]
Probab=99.03 E-value=9.4e-08 Score=90.07 Aligned_cols=224 Identities=12% Similarity=0.086 Sum_probs=147.5
Q ss_pred CceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCce-E
Q psy12614 112 GTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHA-I 189 (708)
Q Consensus 112 ~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~-~ 189 (708)
..+..++++|||+++++...+++|+.|+.... . ..+....+.+.+++|++||+++++...+ .+..|+...... .
T Consensus 28 ~~~e~iAv~pdG~l~vt~~~~~~I~~i~p~g~-~---~~~~~~~~~~~gla~~~dG~l~v~~~~~~~~~~~~~~~~~~~~ 103 (302)
T d2p4oa1 28 TFLENLASAPDGTIFVTNHEVGEIVSITPDGN-Q---QIHATVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTV 103 (302)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTCC-E---EEEEECSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCE
T ss_pred CCcCCEEECCCCCEEEEeCCCCEEEEEeCCCC-E---EEEEcCCCCcceEEEcCCCCeEEEecCCceEEEEEecccccce
Confidence 36889999999999999888998888886544 3 2334456789999999999988887766 777777654332 2
Q ss_pred EEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCeeEEEee----------ccccCeEEEEEeCCCCE
Q psy12614 190 HKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDVK----------THKKDILALTVSEDENY 258 (708)
Q Consensus 190 ~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~~----------~~~~~i~~~~~s~~~~~ 258 (708)
..+... ........+++.++|+ +++...++.+..++...+....... ........+.++.+ ..
T Consensus 104 ~~~~~~-----~~~~~~n~i~~~~~g~~~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ngi~~~~~-~l 177 (302)
T d2p4oa1 104 ETLLTL-----PDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKRFGN-FL 177 (302)
T ss_dssp EEEEEC-----TTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEETT-EE
T ss_pred eecccc-----CCccccceeEEccCCCEEeeccccccceeeeccCCcceeEecCCccceeeccCcccccccccccCC-ce
Confidence 222221 2256688999999998 5566678899999988775433221 11223456666543 34
Q ss_pred EEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEEEcCCCeEEEEeCCCCc--e
Q psy12614 259 LYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSGGLDSYLSLSYYPPKT--L 334 (708)
Q Consensus 259 l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~~~--~ 334 (708)
+++.+..+.|..++... ..... .............+++. |+++++...++.|..++..... +
T Consensus 178 ~~~~~~~~~i~~~~~~~--------~~~~~------~~~~~~~~~~pdgia~d~dG~l~va~~~~~~V~~i~p~G~~~~~ 243 (302)
T d2p4oa1 178 YVSNTEKMLLLRIPVDS--------TDKPG------EPEIFVEQTNIDDFAFDVEGNLYGATHIYNSVVRIAPDRSTTII 243 (302)
T ss_dssp EEEETTTTEEEEEEBCT--------TSCBC------CCEEEEESCCCSSEEEBTTCCEEEECBTTCCEEEECTTCCEEEE
T ss_pred eeecCCCCeEEeccccc--------ccccc------ccccccCCCCCcceEECCCCCEEEEEcCCCcEEEECCCCCEEEE
Confidence 55566678888888766 21000 01111223345678887 7777777788999999887764 3
Q ss_pred eecCccCCCCceEEE---EcCCcEEEEE
Q psy12614 335 VKYPCTLAQSTPVSL---AKDIQHVLLQ 359 (708)
Q Consensus 335 ~~~~~~~~~~~~~~~---s~~~~~l~~~ 359 (708)
.....+...+..++| ++|++.|...
T Consensus 244 ~~~~~~~~~pt~vafg~~~~D~~~Lyvt 271 (302)
T d2p4oa1 244 AQAEQGVIGSTAVAFGQTEGDCTAIYVV 271 (302)
T ss_dssp ECGGGTCTTEEEEEECCSTTTTTEEEEE
T ss_pred EecCCCCCCceEEEEcCCCCCCCEEEEE
Confidence 333334556678999 5677777654
|
| >d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Brain tumor cg10719-pa species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.01 E-value=3.9e-07 Score=84.53 Aligned_cols=236 Identities=13% Similarity=0.091 Sum_probs=160.0
Q ss_pred cEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCC-E-EEE-EcCCCcEEEEeCC
Q psy12614 157 RILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADF-T-IIT-GDSGGFVRFWDGK 232 (708)
Q Consensus 157 ~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~-l~~-~~~dg~i~~wd~~ 232 (708)
....++++++|+.+++-..+ .|++||. +|+.+..+....... ........+++.++. . +++ .+.++.|..++.
T Consensus 24 ~P~gvavd~dg~i~VaD~~n~rI~v~d~-~G~~~~~~~~~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~~~i~~~~~- 100 (279)
T d1q7fa_ 24 EPSGVAVNAQNDIIVADTNNHRIQIFDK-EGRFKFQFGECGKRD-SQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQ- 100 (279)
T ss_dssp CEEEEEECTTCCEEEEEGGGTEEEEECT-TSCEEEEECCBSSST-TCBSSEEEEEEETTTTEEEEEECGGGCEEEEECT-
T ss_pred CccEEEEcCCCCEEEEECCCCEEEEEeC-CCCEEEEecccCCCc-ccccccccccccccccccceeccCCccccccccc-
Confidence 46899999999987776666 9999995 477777664332111 123345566665543 4 333 344567888885
Q ss_pred CCeeEEEee-ccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEE--eccccceEEEE
Q psy12614 233 TGVQWSDVK-THKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNR--VIHEGDVKSLA 309 (708)
Q Consensus 233 ~~~~~~~~~-~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~--~~~~~~v~~l~ 309 (708)
.+.....+. ........+++.++++.+++....+.+.+++... + ....+ ..+......++
T Consensus 101 ~g~~~~~~~~~~~~~p~~~avd~~G~i~v~~~~~~~~~~~~~~g---------~--------~~~~~g~~~~~~~~~~i~ 163 (279)
T d1q7fa_ 101 YGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNG---------N--------VLHKFGCSKHLEFPNGVV 163 (279)
T ss_dssp TSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTS---------C--------EEEEEECTTTCSSEEEEE
T ss_pred cccceeecCCCcccccceeccccCCcEEEEeeccceeeEeccCC---------c--------eeecccccccccccceee
Confidence 566666553 2345678899999999888877778888887654 1 22222 33455677788
Q ss_pred Ee--CCEEEEEcCCCeEEEEeCCCCceeecC--ccCCCCceEEEEcCCcEEEEE--cCCeEEEEEecCCCCCCCCCCCCC
Q psy12614 310 LH--GNRLYSGGLDSYLSLSYYPPKTLVKYP--CTLAQSTPVSLAKDIQHVLLQ--YTSHLELWSLGSAQSTDLSSHSNT 383 (708)
Q Consensus 310 ~~--~~~l~s~~~d~~i~iw~~~~~~~~~~~--~~~~~~~~~~~s~~~~~l~~~--~~~~i~i~~~~~~~~~~~~~~~~~ 383 (708)
+. ++.+++....+.|.+|+.....+..+. +....+..+++.++|+++++. .+..|.+|+... +
T Consensus 164 ~d~~g~i~v~d~~~~~V~~~d~~G~~~~~~g~~g~~~~P~giavD~~G~i~Vad~~~~~~v~~f~~~G-~---------- 232 (279)
T d1q7fa_ 164 VNDKQEIFISDNRAHCVKVFNYEGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQDG-Q---------- 232 (279)
T ss_dssp ECSSSEEEEEEGGGTEEEEEETTCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTTS-C----------
T ss_pred eccceeEEeeeccccceeeeecCCceeeeecccccccCCcccccccCCeEEEEECCCCcEEEEECCCC-C----------
Confidence 77 677788888899999999887766653 234456789999999988874 344688887442 2
Q ss_pred CcccCCCCceEEEEEEe-cCCCceEEEEeCCCCcEEEEEcCCceEEEEEEe
Q psy12614 384 TGVPLLSFPRLIVKMSA-VNNATIRCSVVSNDGKYVAYSTESCVRLHSLDL 433 (708)
Q Consensus 384 ~~~~~~~~~~~~~~~~~-~~~~~i~~~~~s~~g~~l~~~~d~~i~i~~~~~ 433 (708)
-+..+.. ........+++.|||.++++..++.|++|....
T Consensus 233 ----------~~~~~~~~~~~~~p~~vav~~dG~l~V~~~n~~v~~fr~~~ 273 (279)
T d1q7fa_ 233 ----------LISALESKVKHAQCFDVALMDDGSVVLASKDYRLYIYRYVQ 273 (279)
T ss_dssp ----------EEEEEEESSCCSCEEEEEEETTTEEEEEETTTEEEEEECSC
T ss_pred ----------EEEEEeCCCCCCCEeEEEEeCCCcEEEEeCCCeEEEEEeee
Confidence 1222222 223457889999999877766688999998764
|
| >d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Lactonase Drp35 species: Staphylococcus aureus [TaxId: 1280]
Probab=98.99 E-value=7.2e-07 Score=84.36 Aligned_cols=232 Identities=8% Similarity=-0.033 Sum_probs=148.5
Q ss_pred CCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcC----CCcEEEEECC
Q psy12614 26 PKVINCIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGL----QGFVNEYDMR 99 (708)
Q Consensus 26 ~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~----d~~i~vwd~~ 99 (708)
.-.+-.++|.++|++.++-..++.|..||..++.... .+.... .....+++. |+.+++... .+.+...+..
T Consensus 39 ~~~lEG~~~D~~G~Ly~~D~~~g~I~ri~p~g~~~~~-~~~~~~--~~p~gla~~~dG~l~va~~~~~~~~~~i~~~~~~ 115 (319)
T d2dg1a1 39 GLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKR-PFVSHK--ANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATEN 115 (319)
T ss_dssp CCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEE-EEECSS--SSEEEEEECTTSCEEEEECTTSSSCCEEEEECTT
T ss_pred CcCcEeCEECCCCCEEEEECCCCEEEEEECCCCeEEE-EEeCCC--CCeeEEEECCCCCEEEEecCCCccceeEEEEcCC
Confidence 3445789999999977777788999999998876554 444454 678999999 665555432 3345555655
Q ss_pred CCeEeEEEee--cCCceEEEEEecCCCEEEEEeC------CCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEE
Q psy12614 100 RLNIKSSTAV--TSGTCWCLSVHKKKRLLAAGTE------QGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLV 171 (708)
Q Consensus 100 ~~~~~~~~~~--~~~~v~~~~~s~~~~~la~~~~------d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~ 171 (708)
++........ -......+++.++|++.++... .+.+..++...+... .+...-.....++|+||++.|+
T Consensus 116 ~~~~~~~~~~~~~~~~~nd~~~d~~G~l~vtd~~~~~~~~~g~v~~~~~dg~~~~---~~~~~~~~pnGia~s~dg~~ly 192 (319)
T d2dg1a1 116 GDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVT---PIIQNISVANGIALSTDEKVLW 192 (319)
T ss_dssp SCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEE---EEEEEESSEEEEEECTTSSEEE
T ss_pred CceeeeeccCCCcccCCcceeEEeccceeecccccccccCcceeEEEecccceeE---EEeeccceeeeeeeccccceEE
Confidence 5544433321 1245778999999987665322 233555555544432 1222223457899999998776
Q ss_pred Eec-CC-eEEEEEcCCC-ceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCeeEEEeec-----
Q psy12614 172 TGC-AA-AVRVWDIHKG-HAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDVKT----- 242 (708)
Q Consensus 172 ~~~-~d-~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~~~----- 242 (708)
.+. .. .|..|++... .............+........+++.++|+ +++....+.|.+||. +|+.+..+..
T Consensus 193 vad~~~~~I~~~d~~~~g~~~~~~~~~~~~~~~~~~~PdGl~vD~~G~l~Va~~~~g~V~~~~p-~G~~l~~i~~P~~~~ 271 (319)
T d2dg1a1 193 VTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNK-RGYPIGQILIPGRDE 271 (319)
T ss_dssp EEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEECT-TSCEEEEEECTTGGG
T ss_pred EecccCCceEEEEEcCCCceeccccceeeeccCCccceeeeeEcCCCCEEEEEcCCCEEEEECC-CCcEEEEEeCCCcCC
Confidence 554 44 8999997642 222211110000001123466899999997 555667899999995 6888877753
Q ss_pred -cccCeEEEEEeCCCCEEEEEec
Q psy12614 243 -HKKDILALTVSEDENYLYCAGV 264 (708)
Q Consensus 243 -~~~~i~~~~~s~~~~~l~~~~~ 264 (708)
+...+++++|.+++..+++...
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~t~~ 294 (319)
T d2dg1a1 272 GHMLRSTHPQFIPGTNQLIICSN 294 (319)
T ss_dssp TCSCBCCEEEECTTSCEEEEEEE
T ss_pred CcCceeeeEEEeCCCCEEEEEcC
Confidence 3346789999998888876654
|
| >d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Serine/threonine-protein kinase PknD species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.97 E-value=1e-07 Score=87.61 Aligned_cols=231 Identities=11% Similarity=-0.067 Sum_probs=143.9
Q ss_pred CcEEEEEEe--CCEEEEE-cCCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEE
Q psy12614 72 NSIECLTWF--NDRLFSG-GLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYE 148 (708)
Q Consensus 72 ~~v~~l~~~--~~~l~s~-~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~ 148 (708)
..-.+|++. |+..++. +..+.+..++............-......++++++++++++....+.+++++-.+....
T Consensus 14 ~~P~~vavd~dG~i~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~gvav~~~g~i~v~d~~~~~i~~~~~~~~~~~-- 91 (260)
T d1rwia_ 14 LSPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDFNNRVVTLAAGSNNQTV-- 91 (260)
T ss_dssp CCEEEEEECTTCCEEEEECSSSCEEEEEC----CEEECCCCSCCSCCCEEECTTCCEEEEETTTEEEEECTTCSCCEE--
T ss_pred CCCCEEEEcCCCCEEEEEcCCCCEEEEEcCCCceEEEeccCCccCceEEEEcCCCCEEEeeeeeceeeeeeeccceee--
Confidence 456889998 6655544 45577777765554322222222234678999999987777666666666554444432
Q ss_pred EecccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcE
Q psy12614 149 KLLDRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFV 226 (708)
Q Consensus 149 ~~~~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i 226 (708)
.... .......+++.++++++++-..+ .+..++........ .... .......+++.++|+ +++...++.|
T Consensus 92 ~~~~-~~~~p~~iavd~~g~i~v~d~~~~~~~~~~~~~~~~~~-~~~~------~~~~p~~i~~~~~g~~~v~~~~~~~i 163 (260)
T d1rwia_ 92 LPFD-GLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTV-LPFT------GLNDPDGVAVDNSGNVYVTDTDNNRV 163 (260)
T ss_dssp CCCC-SCCSEEEEEECTTCCEEEEEGGGTEEEEECTTCSSCEE-CCCC------SCCSCCEEEECTTCCEEEEEGGGTEE
T ss_pred eeee-eeeecccccccccceeEeeccccccccccccccceeee-eeec------ccCCcceeeecCCCCEeeeccccccc
Confidence 2222 23557899999999887776555 78777765443322 2111 133456889999987 5566777889
Q ss_pred EEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEE-eccccce
Q psy12614 227 RFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNR-VIHEGDV 305 (708)
Q Consensus 227 ~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~v 305 (708)
..++...................+++.++|+++++....+.|..++... .. .... ...-...
T Consensus 164 ~~~d~~~~~~~~~~~~~~~~p~gi~~d~~g~l~vsd~~~~~i~~~~~~~--------~~---------~~~~~~~~~~~P 226 (260)
T d1rwia_ 164 VKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGS--------TT---------STVLPFTGLNTP 226 (260)
T ss_dssp EEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTTEEEEECTTC--------SC---------CEECCCCSCCCE
T ss_pred cccccccceeeeeeccccCCCccceeeeeeeeeeeecCCCEEEEEeCCC--------Ce---------EEEEccCCCCCe
Confidence 9999775544333334456678999999998887777788888887765 21 1111 1122456
Q ss_pred EEEEEe--CCEEEEEcCCCeEEEEeC
Q psy12614 306 KSLALH--GNRLYSGGLDSYLSLSYY 329 (708)
Q Consensus 306 ~~l~~~--~~~l~s~~~d~~i~iw~~ 329 (708)
..|+++ ++++++-..++.|+..+.
T Consensus 227 ~~i~~d~~g~l~vad~~~~rI~~i~~ 252 (260)
T d1rwia_ 227 LAVAVDSDRTVYVADRGNDRVVKLTS 252 (260)
T ss_dssp EEEEECTTCCEEEEEGGGTEEEEECC
T ss_pred EEEEEeCCCCEEEEECCCCEEEEEeC
Confidence 788887 667666666666665544
|
| >d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Lactonase Drp35 species: Staphylococcus aureus [TaxId: 1280]
Probab=98.93 E-value=2e-06 Score=81.30 Aligned_cols=233 Identities=9% Similarity=-0.041 Sum_probs=147.7
Q ss_pred cCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-----eEEEEEcC
Q psy12614 110 TSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA-----AVRVWDIH 184 (708)
Q Consensus 110 ~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d-----~i~iwd~~ 184 (708)
....+..++|.++|++.++-...+.|..|+.++++.. ..+.........+++++||+++++...+ .+...+..
T Consensus 38 ~~~~lEG~~~D~~G~Ly~~D~~~g~I~ri~p~g~~~~--~~~~~~~~~p~gla~~~dG~l~va~~~~~~~~~~i~~~~~~ 115 (319)
T d2dg1a1 38 KGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIK--RPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATEN 115 (319)
T ss_dssp SCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEE--EEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTT
T ss_pred CCcCcEeCEECCCCCEEEEECCCCEEEEEECCCCeEE--EEEeCCCCCeeEEEECCCCCEEEEecCCCccceeEEEEcCC
Confidence 3345678999999997777667889999998887654 3334445668899999999988765432 35555555
Q ss_pred CCceEEEEEecccCCCCCceeEEEEEEccCCEEEEEcCC-------CcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCC
Q psy12614 185 KGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSG-------GFVRFWDGKTGVQWSDVKTHKKDILALTVSEDEN 257 (708)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d-------g~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~ 257 (708)
.+......... ........+++.++|++..++.. +.+..++.. +..+..+...-.....++|+||++
T Consensus 116 ~~~~~~~~~~~-----~~~~~~nd~~~d~~G~l~vtd~~~~~~~~~g~v~~~~~d-g~~~~~~~~~~~~pnGia~s~dg~ 189 (319)
T d2dg1a1 116 GDNLQDIIEDL-----STAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPD-FRTVTPIIQNISVANGIALSTDEK 189 (319)
T ss_dssp SCSCEEEECSS-----SSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTT-SCCEEEEEEEESSEEEEEECTTSS
T ss_pred CceeeeeccCC-----CcccCCcceeEEeccceeecccccccccCcceeEEEecc-cceeEEEeeccceeeeeeeccccc
Confidence 55444333221 12455788999999986666543 346666654 333333333334567899999998
Q ss_pred EEEEE-ecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEEEcCCCeEEEEeCCCCce
Q psy12614 258 YLYCA-GVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSGGLDSYLSLSYYPPKTL 334 (708)
Q Consensus 258 ~l~~~-~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~~~~ 334 (708)
.|+.+ +..+.|..|++.. ........................+++. |++.++....+.|.+++.+...+
T Consensus 190 ~lyvad~~~~~I~~~d~~~--------~g~~~~~~~~~~~~~~~~~~~PdGl~vD~~G~l~Va~~~~g~V~~~~p~G~~l 261 (319)
T d2dg1a1 190 VLWVTETTANRLHRIALED--------DGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNKRGYPI 261 (319)
T ss_dssp EEEEEEGGGTEEEEEEECT--------TSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEECTTSCEE
T ss_pred eEEEecccCCceEEEEEcC--------CCceeccccceeeeccCCccceeeeeEcCCCCEEEEEcCCCEEEEECCCCcEE
Confidence 77655 4578999999865 2100000000111111112235678888 88888888899999999877666
Q ss_pred eecCccC------CCCceEEEEcCCcEEEE
Q psy12614 335 VKYPCTL------AQSTPVSLAKDIQHVLL 358 (708)
Q Consensus 335 ~~~~~~~------~~~~~~~~s~~~~~l~~ 358 (708)
..+..+. ....++++.+++..++.
T Consensus 262 ~~i~~P~~~~~~~~~~~~~~~~~~~~~~~~ 291 (319)
T d2dg1a1 262 GQILIPGRDEGHMLRSTHPQFIPGTNQLII 291 (319)
T ss_dssp EEEECTTGGGTCSCBCCEEEECTTSCEEEE
T ss_pred EEEeCCCcCCCcCceeeeEEEeCCCCEEEE
Confidence 6554222 23567888887766654
|
| >d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Regucalcin species: Agrobacterium tumefaciens [TaxId: 358]
Probab=98.82 E-value=1.1e-05 Score=74.80 Aligned_cols=230 Identities=10% Similarity=0.019 Sum_probs=150.7
Q ss_pred eeeccCCCCcE-EEEEEcCCCCEEE-EEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe-CCEEEEEcCCCcEEE
Q psy12614 19 IKFYAPEPKVI-NCIACEPKSSRLA-VSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF-NDRLFSGGLQGFVNE 95 (708)
Q Consensus 19 ~~~~~~h~~~v-~~~~~s~~~~~la-~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~-~~~l~s~~~d~~i~v 95 (708)
.+.+...+..+ -+..|++....|. +--..+.|..||..+++.. .+. .. ..+.++++. ...|+.++.+ .|.+
T Consensus 9 ~~~~~~~~~~LgEgp~wd~~~~~l~wvDi~~~~I~r~d~~~g~~~--~~~-~~--~~~~~i~~~~dg~l~va~~~-gl~~ 82 (295)
T d2ghsa1 9 GRVLDETPMLLGEGPTFDPASGTAWWFNILERELHELHLASGRKT--VHA-LP--FMGSALAKISDSKQLIASDD-GLFL 82 (295)
T ss_dssp CEEEECSCCSBEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEE--EEE-CS--SCEEEEEEEETTEEEEEETT-EEEE
T ss_pred EEEEcCCCCeeeeCCeEECCCCEEEEEECCCCEEEEEECCCCeEE--EEE-CC--CCcEEEEEecCCCEEEEEeC-ccEE
Confidence 34444443333 4567887555444 4445788999999988653 232 22 678899988 5555556554 5899
Q ss_pred EECCCCeEeEEEee----cCCceEEEEEecCCCEEEEEeC----CCcEEEEEccCCcEEEEEecccccccEEEEEECCCC
Q psy12614 96 YDMRRLNIKSSTAV----TSGTCWCLSVHKKKRLLAAGTE----QGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSG 167 (708)
Q Consensus 96 wd~~~~~~~~~~~~----~~~~v~~~~~s~~~~~la~~~~----d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~ 167 (708)
+|.++++....... ....++.+.+.|+|++.++... .+.-.+|.+..++.. .... .-.....++|++++
T Consensus 83 ~d~~tg~~~~l~~~~~~~~~~~~nd~~vd~~G~iw~~~~~~~~~~~~g~l~~~~~g~~~--~~~~-~~~~~Ng~~~s~d~ 159 (295)
T d2ghsa1 83 RDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVAKGKVT--KLFA-DISIPNSICFSPDG 159 (295)
T ss_dssp EETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEETTEEE--EEEE-EESSEEEEEECTTS
T ss_pred eecccceeeEEeeeecCCCcccceeeEECCCCCEEEEeccccccccceeEeeecCCcEE--EEee-ccCCcceeeecCCC
Confidence 99999876543331 1235889999999997665432 234567777777654 2222 23346789999999
Q ss_pred CEEEEecC-C-eEEEEEcCCC------ceEEEEEecccCCCCCceeEEEEEEccCCEEEEE-cCCCcEEEEeCCCCeeEE
Q psy12614 168 DYLVTGCA-A-AVRVWDIHKG------HAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITG-DSGGFVRFWDGKTGVQWS 238 (708)
Q Consensus 168 ~~l~~~~~-d-~i~iwd~~~~------~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~-~~dg~i~~wd~~~~~~~~ 238 (708)
+.++.+.. . .|..+++... +........ ........+++..+|.+.++ -..+.|..||. +|+.+.
T Consensus 160 ~~l~~~dt~~~~I~~~~~d~~~~~~~~~~~~~~~~~-----~~~g~pdG~~vD~~GnlWva~~~~g~V~~~dp-~G~~~~ 233 (295)
T d2ghsa1 160 TTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDST-----GIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIA 233 (295)
T ss_dssp CEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECT-----TSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEE
T ss_pred ceEEEeecccceeeEeeecccccccccceEEEeccC-----cccccccceEEcCCCCEEeeeeCCCceEEecC-CCcEee
Confidence 97765544 4 8888886421 111112211 22566888999999985544 45678999995 688888
Q ss_pred EeeccccCeEEEEEe-CCCCEEEEEe
Q psy12614 239 DVKTHKKDILALTVS-EDENYLYCAG 263 (708)
Q Consensus 239 ~~~~~~~~i~~~~~s-~~~~~l~~~~ 263 (708)
.+......+++++|- +|.+.|+..+
T Consensus 234 ~i~lP~~~~T~~~FGG~d~~~LyvTt 259 (295)
T d2ghsa1 234 RYEVPGKQTTCPAFIGPDASRLLVTS 259 (295)
T ss_dssp EEECSCSBEEEEEEESTTSCEEEEEE
T ss_pred EecCCCCceEEEEEeCCCCCEEEEEE
Confidence 887666789999996 6777776544
|
| >d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP) species: Squid (Loligo vulgaris) [TaxId: 6622]
Probab=98.80 E-value=7.2e-06 Score=76.92 Aligned_cols=235 Identities=10% Similarity=-0.000 Sum_probs=149.6
Q ss_pred CcEEEEEEe--CCEEEEEcC-------CCcEEEEECCCCeEeEEEeec----CCceEEEEEecCCCEEEEEeCCCcEEEE
Q psy12614 72 NSIECLTWF--NDRLFSGGL-------QGFVNEYDMRRLNIKSSTAVT----SGTCWCLSVHKKKRLLAAGTEQGHINLF 138 (708)
Q Consensus 72 ~~v~~l~~~--~~~l~s~~~-------d~~i~vwd~~~~~~~~~~~~~----~~~v~~~~~s~~~~~la~~~~d~~i~iw 138 (708)
.....++|. |+.+++... +|+|..||.+++......... .+....++|.++++.|+++...+.|..+
T Consensus 18 ~g~EGpa~d~dG~ly~~~~~~~~~~~~~g~I~r~d~~~~~~~~~~~~~~~~~~g~P~Gl~~~~dg~~l~vad~~~~i~~~ 97 (314)
T d1pjxa_ 18 PGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMRLGLLVV 97 (314)
T ss_dssp TTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETTTEEEEE
T ss_pred CCCeEeEEeCCCCEEEEECccccccccCCEEEEEECCCCcEEEEECCccccCCCcceeEEEeCCCCEEEEEECCCeEEEE
Confidence 356778888 666655432 467999999887654433211 2346789999999988888777788899
Q ss_pred EccCCcEEEEEeccccc----ccEEEEEECCCCCEEEEecCC--------------eEEEEEcC-CCceEEEEEecccCC
Q psy12614 139 QISDEGLLYEKLLDRQQ----GRILCTAWHSSGDYLVTGCAA--------------AVRVWDIH-KGHAIHKMSLDKSSK 199 (708)
Q Consensus 139 d~~~~~~~~~~~~~~~~----~~v~~~~~s~d~~~l~~~~~d--------------~i~iwd~~-~~~~~~~~~~~~~~~ 199 (708)
+.+++... ....... .....+++.++|.+.++-... .=.+|.+. +++...... .
T Consensus 98 ~~~g~~~~--~~~~~~~g~~~~~pndl~~d~~G~lyvtd~~~~~~~~~~~~~~~~~~G~v~~~~~dg~~~~~~~-~---- 170 (314)
T d1pjxa_ 98 QTDGTFEE--IAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTDGQMIQVDT-A---- 170 (314)
T ss_dssp ETTSCEEE--CCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTTSCEEEEEE-E----
T ss_pred eCCCcEEE--EEeccccccccCCCcEEEECCCCCEEEecCccCcccccccceeccCCceEEEEeecCceeEeeC-C----
Confidence 98766543 1111111 135779999999888774321 11344333 344332221 1
Q ss_pred CCCceeEEEEEEccCC-----EE-EEEcCCCcEEEEeCCCCeeEE------Eeec-cccCeEEEEEeCCCCEEEEEecCC
Q psy12614 200 FSKNTAVWCVAFCADF-----TI-ITGDSGGFVRFWDGKTGVQWS------DVKT-HKKDILALTVSEDENYLYCAGVDP 266 (708)
Q Consensus 200 ~~~~~~v~~~~~~~~~-----~l-~~~~~dg~i~~wd~~~~~~~~------~~~~-~~~~i~~~~~s~~~~~l~~~~~dg 266 (708)
....+.++|+|++ .+ ++-+..+.|..||+.....+. .+.+ .......+++.++|+..++....+
T Consensus 171 ---~~~pNGi~~~~d~d~~~~~lyv~d~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~pdGiavD~~GnlyVa~~~~g 247 (314)
T d1pjxa_ 171 ---FQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSS 247 (314)
T ss_dssp ---ESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTT
T ss_pred ---cceeeeeEECCCCCcceeEEEEEeecccceEEeeccCccccceeeEEEEccccccccceeeEEecCCcEEEEEcCCC
Confidence 2335678898865 34 455667889998875432221 1221 123456899999999888777789
Q ss_pred eEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CC-EEEEEcCCCeEEEEeCCCC
Q psy12614 267 TVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GN-RLYSGGLDSYLSLSYYPPK 332 (708)
Q Consensus 267 ~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~-~l~s~~~d~~i~iw~~~~~ 332 (708)
.|.+|+.+. ++ ....+.......++++|. ++ ++++.+.++.|...++...
T Consensus 248 ~I~~~dp~~--------g~--------~~~~i~~p~~~~t~~afg~d~~~lyVt~~~~g~i~~~~~~~~ 300 (314)
T d1pjxa_ 248 HIEVFGPDG--------GQ--------PKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQRN 300 (314)
T ss_dssp EEEEECTTC--------BS--------CSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSSC
T ss_pred EEEEEeCCC--------CE--------EEEEEECCCCCEEEEEEeCCCCEEEEEECCCCcEEEEECCCC
Confidence 999999876 43 233344455678899998 43 5677778888888877543
|
| >d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Tricorn protease N-terminal domain family: Tricorn protease N-terminal domain domain: Tricorn protease N-terminal domain species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=98.76 E-value=1.2e-06 Score=81.32 Aligned_cols=229 Identities=11% Similarity=0.057 Sum_probs=131.2
Q ss_pred EEecC--CCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecC----C---eEEEEEcCCCce
Q psy12614 118 SVHKK--KRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCA----A---AVRVWDIHKGHA 188 (708)
Q Consensus 118 ~~s~~--~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~----d---~i~iwd~~~~~~ 188 (708)
..+|| |+.+|..+ ++.|++.|+.+++. ..+..+.+.+...+|||||+.||.... + .|.+++..+++.
T Consensus 5 ~~sPdi~G~~v~f~~-~~dl~~~d~~~g~~---~~Lt~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~i~~~~~~~g~~ 80 (281)
T d1k32a2 5 LLNPDIHGDRIIFVC-CDDLWEHDLKSGST---RKIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGEI 80 (281)
T ss_dssp CEEEEEETTEEEEEE-TTEEEEEETTTCCE---EEEECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTEE
T ss_pred ccCCCCCCCEEEEEe-CCcEEEEECCCCCE---EEEecCCCcccCEEECCCCCEEEEEEeeCCCCCceEEEEEEecCCce
Confidence 46888 99998865 46799999999987 456667778899999999999986532 2 377778777765
Q ss_pred EEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCC------CcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEE
Q psy12614 189 IHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSG------GFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYC 261 (708)
Q Consensus 189 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~d------g~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~ 261 (708)
... ..................|+|||+ ++..... ..+...+...+...... ....... +.+++..++.
T Consensus 81 ~~l-t~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-~~~~~~~~~~ 155 (281)
T d1k32a2 81 KRI-TYFSGKSTGRRMFTDVAGFDPDGNLIISTDAMQPFSSMTCLYRVENDGINFVPLN---LGPATHI-LFADGRRVIG 155 (281)
T ss_dssp EEC-CCCCEEEETTEECSEEEEECTTCCEEEEECTTSSSTTCCEEEEEEGGGTEEEECC---SCSCSEE-EEETTEEEEE
T ss_pred EEe-eecCCCccCccccccccccCCCCCEEEEEEccCCCccceeeeeecCCCceeEEec---CCcccee-eecCCCeEEE
Confidence 432 211100001123456788999996 4443221 23445555444332221 2222233 3344433332
Q ss_pred -EecCC-----------eEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEeCCEEEEEc-CC--CeEEE
Q psy12614 262 -AGVDP-----------TVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALHGNRLYSGG-LD--SYLSL 326 (708)
Q Consensus 262 -~~~dg-----------~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~s~~-~d--~~i~i 326 (708)
...+. ......... + ................+.+..++... .+ ..|.+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~--------~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 218 (281)
T d1k32a2 156 RNTFELPHWKGYRGGTRGKIWIEVNS--------G---------AFKKIVDMSTHVSSPVIVGHRIYFITDIDGFGQIYS 218 (281)
T ss_dssp ESCSCCTTSTTCCSTTCCEEEEEEET--------T---------EEEEEECCSSCCEEEEEETTEEEEEECTTSSCEEEE
T ss_pred eeccccceeeeeccCCcceeeeeccc--------c---------ceeeccCCccccceeeeeccccceecccccccceEE
Confidence 22111 111111111 1 11222223333444445544444433 33 36777
Q ss_pred EeCCCCceeecCccCCCCceEEEEcCCcEEEEEcCCeEEEEEecCCC
Q psy12614 327 SYYPPKTLVKYPCTLAQSTPVSLAKDIQHVLLQYTSHLELWSLGSAQ 373 (708)
Q Consensus 327 w~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~i~i~~~~~~~ 373 (708)
+|+++...+.+. .........++|||+.|+...++.|.++|+.+++
T Consensus 219 ~d~~g~~~~~lt-~~~~~~~~~~SpDG~~I~f~~~~~l~~~d~~~g~ 264 (281)
T d1k32a2 219 TDLDGKDLRKHT-SFTDYYPRHLNTDGRRILFSKGGSIYIFNPDTEK 264 (281)
T ss_dssp EETTSCSCEECC-CCCSSCEEEEEESSSCEEEEETTEEEEECTTTCC
T ss_pred EeCCCCceEEee-cCCCcccccCcCCCCEEEEEeCCEEEEEECCCCC
Confidence 888888877766 2333445679999999999888999999988766
|
| >d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Regucalcin species: Agrobacterium tumefaciens [TaxId: 358]
Probab=98.67 E-value=2.3e-05 Score=72.65 Aligned_cols=226 Identities=8% Similarity=-0.058 Sum_probs=147.6
Q ss_pred EEEEecCCCEEEEE-eCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCCeEEEEEcCCCceEEEEEe
Q psy12614 116 CLSVHKKKRLLAAG-TEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAAAVRVWDIHKGHAIHKMSL 194 (708)
Q Consensus 116 ~~~~s~~~~~la~~-~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~i~iwd~~~~~~~~~~~~ 194 (708)
...|++....|... -..+.|..||..+++... + .....+.++++.++|.++++ +.+.+.++|..+++.......
T Consensus 22 gp~wd~~~~~l~wvDi~~~~I~r~d~~~g~~~~---~-~~~~~~~~i~~~~dg~l~va-~~~gl~~~d~~tg~~~~l~~~ 96 (295)
T d2ghsa1 22 GPTFDPASGTAWWFNILERELHELHLASGRKTV---H-ALPFMGSALAKISDSKQLIA-SDDGLFLRDTATGVLTLHAEL 96 (295)
T ss_dssp EEEEETTTTEEEEEEGGGTEEEEEETTTTEEEE---E-ECSSCEEEEEEEETTEEEEE-ETTEEEEEETTTCCEEEEECS
T ss_pred CCeEECCCCEEEEEECCCCEEEEEECCCCeEEE---E-ECCCCcEEEEEecCCCEEEE-EeCccEEeecccceeeEEeee
Confidence 45678755545443 357889999999887642 2 22456789999999876665 456899999998886544433
Q ss_pred cccCCCCCceeEEEEEEccCCEEEEEcC-----CCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEe-cCCeE
Q psy12614 195 DKSSKFSKNTAVWCVAFCADFTIITGDS-----GGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAG-VDPTV 268 (708)
Q Consensus 195 ~~~~~~~~~~~v~~~~~~~~~~l~~~~~-----dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-~dg~i 268 (708)
... .....++.+.+.|+|++..++. .+.-.+|.+..++...... .-.....++|+++++.++.+. ..+.|
T Consensus 97 ~~~---~~~~~~nd~~vd~~G~iw~~~~~~~~~~~~g~l~~~~~g~~~~~~~-~~~~~Ng~~~s~d~~~l~~~dt~~~~I 172 (295)
T d2ghsa1 97 ESD---LPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVAKGKVTKLFA-DISIPNSICFSPDGTTGYFVDTKVNRL 172 (295)
T ss_dssp STT---CTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEETTEEEEEEE-EESSEEEEEECTTSCEEEEEETTTCEE
T ss_pred ecC---CCcccceeeEECCCCCEEEEeccccccccceeEeeecCCcEEEEee-ccCCcceeeecCCCceEEEeeccccee
Confidence 221 1245788999999998665542 2345566666676554443 234557899999998776554 46788
Q ss_pred EEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEEEEEcCCCeEEEEeCCCCceeecCccCCCCce
Q psy12614 269 VCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRLYSGGLDSYLSLSYYPPKTLVKYPCTLAQSTP 346 (708)
Q Consensus 269 ~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~ 346 (708)
..|++.. .......+........+..+....+++. |++.++.-..+.|..|+.+...+..+.-|...+.+
T Consensus 173 ~~~~~d~--------~~~~~~~~~~~~~~~~~~~g~pdG~~vD~~GnlWva~~~~g~V~~~dp~G~~~~~i~lP~~~~T~ 244 (295)
T d2ghsa1 173 MRVPLDA--------RTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDTDGNHIARYEVPGKQTTC 244 (295)
T ss_dssp EEEEBCT--------TTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECTTCCEEEEEECSCSBEEE
T ss_pred eEeeecc--------cccccccceEEEeccCcccccccceEEcCCCCEEeeeeCCCceEEecCCCcEeeEecCCCCceEE
Confidence 8888764 1100000111122233344567788887 67666666778999999888777777756667788
Q ss_pred EEEE-cCCcEEEE
Q psy12614 347 VSLA-KDIQHVLL 358 (708)
Q Consensus 347 ~~~s-~~~~~l~~ 358 (708)
++|- +|.+.|..
T Consensus 245 ~~FGG~d~~~Lyv 257 (295)
T d2ghsa1 245 PAFIGPDASRLLV 257 (295)
T ss_dssp EEEESTTSCEEEE
T ss_pred EEEeCCCCCEEEE
Confidence 8886 66665554
|
| >d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Tricorn protease N-terminal domain family: Tricorn protease N-terminal domain domain: Tricorn protease N-terminal domain species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=98.65 E-value=3.1e-06 Score=78.50 Aligned_cols=234 Identities=12% Similarity=0.112 Sum_probs=125.5
Q ss_pred eEEEEcC--CcEEEEEcCCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEEE-c
Q psy12614 346 PVSLAKD--IQHVLLQYTSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAYS-T 422 (708)
Q Consensus 346 ~~~~s~~--~~~l~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~~-~ 422 (708)
.+.+||+ |+.++...++.|.+.++..++ ..+ ...+.......+|||||++||.. .
T Consensus 3 ~~~~sPdi~G~~v~f~~~~dl~~~d~~~g~---------------------~~~-Lt~~~~~~~~p~~SPDG~~iaf~~~ 60 (281)
T d1k32a2 3 NLLLNPDIHGDRIIFVCCDDLWEHDLKSGS---------------------TRK-IVSNLGVINNARFFPDGRKIAIRVM 60 (281)
T ss_dssp CCCEEEEEETTEEEEEETTEEEEEETTTCC---------------------EEE-EECSSSEEEEEEECTTSSEEEEEEE
T ss_pred CcccCCCCCCCEEEEEeCCcEEEEECCCCC---------------------EEE-EecCCCcccCEEECCCCCEEEEEEe
Confidence 3467899 999998888888888988765 222 24556778889999999999962 2
Q ss_pred -C---CceEEEEEEecCCcceeEEeecCCcccc--cceeEEEEEecCCCeEEEEecCCc------EEEecCCCeEEEEEe
Q psy12614 423 -E---SCVRLHSLDLDGDKPQISRIKNLPAPLF--KSIFTHVLISADSTLLLAVSLNGP------LYIIDLSSLEIKYCV 490 (708)
Q Consensus 423 -d---~~i~i~~~~~~~~~~~~~~~~~~~~~~~--~~~i~~~~~s~d~~~l~~~~~dg~------i~~~~~~~~~~~~~~ 490 (708)
+ ....+|-+....+. ..++........ .......+|+|||+.|+....... ++.++...... ...
T Consensus 61 ~~~~~~~~~i~~~~~~~g~--~~~lt~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 137 (281)
T d1k32a2 61 RGSSLNTADLYFYNGENGE--IKRITYFSGKSTGRRMFTDVAGFDPDGNLIISTDAMQPFSSMTCLYRVENDGINF-VPL 137 (281)
T ss_dssp ESTTCCEEEEEEEETTTTE--EEECCCCCEEEETTEECSEEEEECTTCCEEEEECTTSSSTTCCEEEEEEGGGTEE-EEC
T ss_pred eCCCCCceEEEEEEecCCc--eEEeeecCCCccCccccccccccCCCCCEEEEEEccCCCccceeeeeecCCCcee-EEe
Confidence 2 23446655543332 333211111111 123345899999999987654432 33333221122 111
Q ss_pred cCCCCCccCcceEEEEECCCCcEEEEEecCC-----------eEEEEECC-ceeeecCCCCCCceEEEEcCCCCEEEEEe
Q psy12614 491 DPYKSNLMSDVISLVQMSECKQYIVCADRKS-----------HVVIWKNG-QHHASLPRYRKPSTAMAIHPTLSTLVTVY 558 (708)
Q Consensus 491 ~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~-----------~i~iw~~~-~~~~~~~~~~~~v~~l~~s~d~~~l~~~~ 558 (708)
. ........+.++++.++....+. ...+.... ........+........++++. .+....
T Consensus 138 ~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 209 (281)
T d1k32a2 138 N-------LGPATHILFADGRRVIGRNTFELPHWKGYRGGTRGKIWIEVNSGAFKKIVDMSTHVSSPVIVGHR-IYFITD 209 (281)
T ss_dssp C-------SCSCSEEEEETTEEEEEESCSCCTTSTTCCSTTCCEEEEEEETTEEEEEECCSSCCEEEEEETTE-EEEEEC
T ss_pred c-------CCccceeeecCCCeEEEeeccccceeeeeccCCcceeeeeccccceeeccCCccccceeeeeccc-cceecc
Confidence 1 11223344444444444432221 11111111 1222223334445556666542 233233
Q ss_pred c--CCcEEEEEcCCCCCCchhhhhhccCchhhhcCCCCeeEEEeCCCCCceEEEEcCeeEEEEecCCCCC
Q psy12614 559 S--DHRIVEFDLNRKAFTTFSRKLETNHPNEWLSRQLPVLGIEFDPQDSSLIYLMDDSALCVINKNKSLA 626 (708)
Q Consensus 559 ~--dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~~~~l~~~~~d~~i~~wd~~~~~~ 626 (708)
. ...|+++|+++++.. .+..+. ......|+|||+.|+... ++.|+++|+....+
T Consensus 210 ~~~~~~l~~~d~~g~~~~------------~lt~~~-~~~~~~~SpDG~~I~f~~-~~~l~~~d~~~g~~ 265 (281)
T d1k32a2 210 IDGFGQIYSTDLDGKDLR------------KHTSFT-DYYPRHLNTDGRRILFSK-GGSIYIFNPDTEKI 265 (281)
T ss_dssp TTSSCEEEEEETTSCSCE------------ECCCCC-SSCEEEEEESSSCEEEEE-TTEEEEECTTTCCE
T ss_pred cccccceEEEeCCCCceE------------EeecCC-CcccccCcCCCCEEEEEe-CCEEEEEECCCCCE
Confidence 3 335888888877654 111111 122346899999988754 67899998875543
|
| >d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Methanol dehydrogenase, heavy chain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=98.17 E-value=0.0021 Score=65.07 Aligned_cols=300 Identities=14% Similarity=0.125 Sum_probs=170.4
Q ss_pred CEEEEEeC-CCcEEEEeC-CCCCeEEEEEe-cCCCC--------CcEEEEEEeCCEEEEEcCCCcEEEEECCCCeEeEEE
Q psy12614 39 SRLAVSRA-DQSIEIWDI-SETPHVDRVFI-GDPLS--------NSIECLTWFNDRLFSGGLQGFVNEYDMRRLNIKSST 107 (708)
Q Consensus 39 ~~la~~~~-dg~v~iwd~-~~~~~~~~~~~-~h~~~--------~~v~~l~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~ 107 (708)
..|.+++. ++.|.-.|. ++|+.+= .+. ..... ..-+.+++.+..++.++.|+.+.-.|.++|+.+...
T Consensus 63 g~vyv~t~~~~~v~Alda~~tG~~~W-~~~~~~~~~~~~~~~~~~~~rg~a~~~~~i~~~~~~g~l~alda~tG~~~w~~ 141 (571)
T d2ad6a1 63 DMMYVHSAFPNNTYALNLNDPGKIVW-QHKPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQANGHLLALDAKTGKINWEV 141 (571)
T ss_dssp TEEEEECSTTTCEEEEETTCTTSEEE-EECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CEEEEecCCCCeEEEEeCCCCCceEE-EecCCCCcccccccccCcCCCcceeeCCeEEEEeCCCcEEeeehhhhhhhccc
Confidence 34555543 678888887 4688764 222 11100 011345667788999999999999999999987766
Q ss_pred eecC----CceEEEEEecCCCEEEEEeC------CCcEEEEEccCCcEEEEEecccc-----------------------
Q psy12614 108 AVTS----GTCWCLSVHKKKRLLAAGTE------QGHINLFQISDEGLLYEKLLDRQ----------------------- 154 (708)
Q Consensus 108 ~~~~----~~v~~~~~s~~~~~la~~~~------d~~i~iwd~~~~~~~~~~~~~~~----------------------- 154 (708)
.... ..+++--.-.++ .++++.. +|.|+-+|..+|+.+........
T Consensus 142 ~~~~~~~~~~~t~~p~v~~~-~vivg~~~~~~~~~G~v~a~D~~TG~~~W~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (571)
T d2ad6a1 142 EVCDPKVGSTLTQAPFVAKD-TVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQFGLG 220 (571)
T ss_dssp ECCCGGGTCBCCSCCEEETT-EEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCSSHH
T ss_pred cccccccccceeecCeEeCC-eEEEeeccccccccCcEEEEECCCCcEEEEEeccCCcccccccccccccccccCccccc
Confidence 4221 112211111233 3444442 67899999999999864332210
Q ss_pred ------------cccE-EEEEECCCCCEEEEecC----------------C-eEEEEEcCCCceEEEEEecccCC--CCC
Q psy12614 155 ------------QGRI-LCTAWHSSGDYLVTGCA----------------A-AVRVWDIHKGHAIHKMSLDKSSK--FSK 202 (708)
Q Consensus 155 ------------~~~v-~~~~~s~d~~~l~~~~~----------------d-~i~iwd~~~~~~~~~~~~~~~~~--~~~ 202 (708)
.+.+ ...++.++...++.+.. . .+...|.++|+.+..+...+... +..
T Consensus 221 ~~~~~~~~~~~~gg~vW~~~s~D~~~g~~y~~tg~~~p~~~~~r~g~n~~s~svvAld~~TG~~~W~~q~~~~D~Wd~D~ 300 (571)
T d2ad6a1 221 TKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAG 300 (571)
T ss_dssp HHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCCCC
T ss_pred ccccCCcccccCCCccccccccchhcCeeeeecccccCccccccccccccccceeeeeccchhheecccccCcccccccc
Confidence 0111 23455566665554433 2 57888999999998887543111 000
Q ss_pred ceeEEEEEEccCCE----EEEEcCCCcEEEEeCCCCeeEEEeecc-----------------------------------
Q psy12614 203 NTAVWCVAFCADFT----IITGDSGGFVRFWDGKTGVQWSDVKTH----------------------------------- 243 (708)
Q Consensus 203 ~~~v~~~~~~~~~~----l~~~~~dg~i~~wd~~~~~~~~~~~~~----------------------------------- 243 (708)
...........+++ ++.++.+|.++++|..+|+.+...+..
T Consensus 301 ~~~~~l~~~~~~g~~~~~v~~~~k~G~l~vlDr~tG~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~~~p 380 (571)
T d2ad6a1 301 VNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICP 380 (571)
T ss_dssp CCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESS
T ss_pred ccccceeeeeccCccccceeeccccceEEEEecCCCcEeeeeccCCcccccccccccccccccCcccccccccCceEEEe
Confidence 11111122223442 568889999999999999877432110
Q ss_pred --cc--CeEEEEEeCCCCEEEEEecCC-------------------------------------eEEEEEccCCcccccC
Q psy12614 244 --KK--DILALTVSEDENYLYCAGVDP-------------------------------------TVVCFQRTRKPQVCST 282 (708)
Q Consensus 244 --~~--~i~~~~~s~~~~~l~~~~~dg-------------------------------------~i~iw~~~~~~~~~~~ 282 (708)
.+ .-...+++|+...++....+. .|.-+|+.+
T Consensus 381 ~~~Gg~~w~~~a~dP~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~AiD~~T------- 453 (571)
T d2ad6a1 381 SAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTT------- 453 (571)
T ss_dssp CTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTT-------
T ss_pred ccccccccccceECCCCceEEEeccccccccccccccccCCccccccceeeccccCCcccCCcccEEEeccCC-------
Confidence 00 001367888887777655442 333444444
Q ss_pred CCCCCCCcceEEeEEEeccccceEEEEEeCCEEEEEcCCCeEEEEeCCCCc-eeecCc-cCCCCceEEEEcCCcE
Q psy12614 283 SGPEQGSSVWVRSVNRVIHEGDVKSLALHGNRLYSGGLDSYLSLSYYPPKT-LVKYPC-TLAQSTPVSLAKDIQH 355 (708)
Q Consensus 283 ~g~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~s~~~d~~i~iw~~~~~~-~~~~~~-~~~~~~~~~~s~~~~~ 355 (708)
|+ ..|..........+ .+...+.++++++.|+.++.+|.++++ +.++.- .......+.+..||+.
T Consensus 454 -G~----~~W~~~~~~~~~~g---~l~TagglVf~G~~dg~l~A~Da~tGe~lW~~~l~~~~~a~P~ty~~dGkq 520 (571)
T d2ad6a1 454 -GK----AKWTKWEKFAAWGG---TLYTKGGLVWYATLDGYLKALDNKDGKELWNFKMPSGGIGSPMTYSFKGKQ 520 (571)
T ss_dssp -CC----EEEEEEESSCCCSB---CEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEE
T ss_pred -Cc----eeeEcCCCCCCCcc---eeEecCCEEEEECCCCeEEEEECCCCcEEEEEECCCCceecceEEEECCEE
Confidence 33 33322111111111 122237889999999999999999877 433331 2334456777778864
|
| >d1utca2 b.69.6.1 (A:4-330) Clathrin heavy-chain terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Clathrin heavy-chain terminal domain family: Clathrin heavy-chain terminal domain domain: Clathrin heavy-chain terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=98.17 E-value=0.0019 Score=56.83 Aligned_cols=229 Identities=9% Similarity=0.135 Sum_probs=152.0
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe-CCEEEEEcCCCcEEEEECCCC-eEeEEEe
Q psy12614 31 CIACEPKSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF-NDRLFSGGLQGFVNEYDMRRL-NIKSSTA 108 (708)
Q Consensus 31 ~~~~s~~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~-~~~l~s~~~d~~i~vwd~~~~-~~~~~~~ 108 (708)
+.-.+|..+.||.=+ ..++.|+|+++.+.+. ... +...|.--.|- .+.|+-.+ +..|.-|+++.. .+.+.+.
T Consensus 67 sAIMhP~~~IiALra-g~~LQiFnletK~klk-s~~---~~e~VvfWkWis~~~L~lVT-~taVYHW~~~g~s~P~k~fd 140 (327)
T d1utca2 67 SAIMNPASKVIALKA-GKTLQIFNIEMKSKMK-AHT---MTDDVTFWKWISLNTVALVT-DNAVYHWSMEGESQPVKMFD 140 (327)
T ss_dssp EEEECSSSSEEEEEE-TTEEEEEETTTTEEEE-EEE---CSSCCCEEEESSSSEEEEEC-SSEEEEEESSSSCCCEEEEE
T ss_pred hhhcCCCCcEEEEec-CCeEEEEehhHhhhhc-eEE---cCCCcEEEEecCCCEEEEEc-CCceEEEcccCCCCchhhhh
Confidence 455789999888866 4589999999977654 333 34677777777 66666554 457999999543 4666666
Q ss_pred ecC----CceEEEEEecCCCEEEEEe---C----CCcEEEEEccCCcEEEEEecccccccEEEEEECCCC---CEEEEec
Q psy12614 109 VTS----GTCWCLSVHKKKRLLAAGT---E----QGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSG---DYLVTGC 174 (708)
Q Consensus 109 ~~~----~~v~~~~~s~~~~~la~~~---~----d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~---~~l~~~~ 174 (708)
.|. ..|.....+++.++++..+ . .|.+.+|..+.+.. +.+.+|.+....+.+..+. +.++.+.
T Consensus 141 R~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~i~G~mQLYS~er~~s---Q~ieGhaa~F~~~~~~g~~~~~~lf~fa~ 217 (327)
T d1utca2 141 RHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVS---QPIEGHAASFAQFKMEGNAEESTLFCFAV 217 (327)
T ss_dssp CCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTEE---EEECCSEEEEEEECCTTCSSCEEEEEEEE
T ss_pred hcccccCceEEEEEECCCCCEEEEEeEecCCCceeEEEEEEEeccCcC---ccccceeeeeEEEEcCCCCCCceEEEEEE
Confidence 553 5788888999999887643 2 46788999887765 6788887766555543221 2333333
Q ss_pred C---C-eEEEEEcCCCc--------eEEEEEecccCCCCCceeEEEEEEccC-CEEEEEcCCCcEEEEeCCCCeeEEEee
Q psy12614 175 A---A-AVRVWDIHKGH--------AIHKMSLDKSSKFSKNTAVWCVAFCAD-FTIITGDSGGFVRFWDGKTGVQWSDVK 241 (708)
Q Consensus 175 ~---d-~i~iwd~~~~~--------~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l~~~~~dg~i~~wd~~~~~~~~~~~ 241 (708)
+ . .+.+.++.... ....+..+.. ...+...++..++. |-+...+.-|.|++||++++.++..-+
T Consensus 218 r~~~~~kLhIiEig~~~~g~~~f~kk~vdi~fppe---a~~DFPvamqvs~kygiiyviTK~G~i~lyDleTgt~i~~nR 294 (327)
T d1utca2 218 RGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPE---AQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNR 294 (327)
T ss_dssp EETTEEEEEEEECSCCCTTCCCCCCEEEECCCCTT---CTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred CCCCCcEEEEEEcCCCccCCCCCcceeEEEECCcc---ccCCcEEEEEeeccCCEEEEEecCcEEEEEEcccccEEEEee
Confidence 2 2 67787775421 1111212211 11444556666654 457788899999999999999988877
Q ss_pred ccccCeEEEEEeCCCCEEEEEecCCeEEEE
Q psy12614 242 THKKDILALTVSEDENYLYCAGVDPTVVCF 271 (708)
Q Consensus 242 ~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw 271 (708)
-....|...+-..+..-+++...+|.+..-
T Consensus 295 Is~~~iF~~a~~~~~~Gi~~VNr~GqVl~v 324 (327)
T d1utca2 295 ISGETIFVTAPHEATAGIIGVNRKGQVLSV 324 (327)
T ss_dssp CCSSCEEEEEEETTTTEEEEEETTSEEEEE
T ss_pred cCCCceEEeccCCCCceEEEECCCCeEEEE
Confidence 667777766666665567777777776543
|
| >d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: YWTD domain family: YWTD domain domain: Nidogen species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.03 E-value=0.004 Score=55.64 Aligned_cols=217 Identities=11% Similarity=-0.023 Sum_probs=140.0
Q ss_pred CCCcEEEEEEcCCCCEEEEEe-CCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEE-EEcCCCcEEEEECCC
Q psy12614 25 EPKVINCIACEPKSSRLAVSR-ADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLF-SGGLQGFVNEYDMRR 100 (708)
Q Consensus 25 h~~~v~~~~~s~~~~~la~~~-~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~-s~~~d~~i~vwd~~~ 100 (708)
+...+.+++|.+..++|.... .++.|...++..+.... .+.... ..+.++++. ++.|+ +-...+.|.+.++..
T Consensus 34 ~~~~~~~ld~D~~~~~iywsd~~~~~I~~~~l~g~~~~~-v~~~~~--~~p~~iAvD~~~~~lY~~d~~~~~I~~~~~dg 110 (263)
T d1npea_ 34 PAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTT-IIRQDL--GSPEGIALDHLGRTIFWTDSQLDRIEVAKMDG 110 (263)
T ss_dssp EEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEE-EECTTC--CCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CCCcEEEEEEEeCCCEEEEEECCCCeEEEEEcccCCcEE-EEEecc--ccccEEEEeccCCeEEEeccCCCEEEEEecCC
Confidence 445578899999888887764 45778888887655443 454443 578899998 66665 545678999999887
Q ss_pred CeEeEEEeecCCceEEEEEecCCCEEEEEeCC---CcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC-
Q psy12614 101 LNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQ---GHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA- 176 (708)
Q Consensus 101 ~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d---~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d- 176 (708)
......+......+..+++.|...+|...... ..|..-++...... ......-.....+++.+.++.|+.+...
T Consensus 111 ~~~~~l~~~~l~~p~~l~vdp~~g~ly~t~~~~~~~~I~r~~~dG~~~~--~i~~~~~~~P~glaiD~~~~~lYw~d~~~ 188 (263)
T d1npea_ 111 TQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRR--ILAQDNLGLPNGLTFDAFSSQLCWVDAGT 188 (263)
T ss_dssp CSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCE--EEECTTCSCEEEEEEETTTTEEEEEETTT
T ss_pred ceEEEEecccccCCcEEEEecccCcEEEeecCCCCcEEEEecCCCCCce--eeeeecccccceEEEeecCcEEEEEeCCC
Confidence 65443333444678999999988877754332 23444455554433 2222233566899999888888776543
Q ss_pred -eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEE-EEEcCCCcEEEEeCCCCeeEEEee-ccccCeEEEEEe
Q psy12614 177 -AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTI-ITGDSGGFVRFWDGKTGVQWSDVK-THKKDILALTVS 253 (708)
Q Consensus 177 -~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l-~~~~~dg~i~~wd~~~~~~~~~~~-~~~~~i~~~~~s 253 (708)
.|...++.... ...+... .....++++. ++.+ .+-...+.|...|..+++.+..+. ........+++.
T Consensus 189 ~~I~~~~~~g~~-~~~v~~~-------~~~P~~lav~-~~~lYwtd~~~~~I~~~~~~~g~~~~~~~~~~~~~~~gi~v~ 259 (263)
T d1npea_ 189 HRAECLNPAQPG-RRKVLEG-------LQYPFAVTSY-GKNLYYTDWKTNSVIAMDLAISKEMDTFHPHKQTRLYGITIA 259 (263)
T ss_dssp TEEEEEETTEEE-EEEEEEC-------CCSEEEEEEE-TTEEEEEETTTTEEEEEETTTTEEEEEECCSSCCCCCCEEEE
T ss_pred CEEEEEECCCCC-eEEEECC-------CCCcEEEEEE-CCEEEEEECCCCEEEEEECCCCccceEECCCCCCCcceEEEe
Confidence 89888886433 3333322 2234577776 4564 455567889999998888776653 233444455554
Q ss_pred CC
Q psy12614 254 ED 255 (708)
Q Consensus 254 ~~ 255 (708)
++
T Consensus 260 ~~ 261 (263)
T d1npea_ 260 LS 261 (263)
T ss_dssp CS
T ss_pred CC
Confidence 43
|
| >d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: YWTD domain family: YWTD domain domain: Low density lipoprotein (LDL) receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.84 E-value=0.0091 Score=53.40 Aligned_cols=209 Identities=11% Similarity=0.056 Sum_probs=132.1
Q ss_pred CCCCcEEEEEEcCCCCEEEEEe-CCCcEEEEeCCCCC---eEEEEEecCCCCCcEEEEEEe--CCEEE-EEcCCCcEEEE
Q psy12614 24 PEPKVINCIACEPKSSRLAVSR-ADQSIEIWDISETP---HVDRVFIGDPLSNSIECLTWF--NDRLF-SGGLQGFVNEY 96 (708)
Q Consensus 24 ~h~~~v~~~~~s~~~~~la~~~-~dg~v~iwd~~~~~---~~~~~~~~h~~~~~v~~l~~~--~~~l~-s~~~d~~i~vw 96 (708)
.....+.+++|++.+++|.... .++.|.--++.... .....+.... ..+.+|++. ++.|. +-...+.|.+.
T Consensus 27 ~~~~~~~~id~d~~~~~lYw~D~~~~~I~~~~l~~~~~~~~~~~~~~~~~--~~p~glAvD~~~~~lY~~d~~~~~I~v~ 104 (266)
T d1ijqa1 27 PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDI--QAPDGLAVDWIHSNIYWTDSVLGTVSVA 104 (266)
T ss_dssp CSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSC--SCCCEEEEETTTTEEEEEETTTTEEEEE
T ss_pred CCCCceEEEEEEeCCCEEEEEECCCCEEEEEEecCCCCCcceEEEEeCCC--CCcceEEEeeccceEEEEecCCCEEEeE
Confidence 4556778999999888887764 35567666664321 1222333333 556677876 55454 55667889999
Q ss_pred ECCCCeEeEEEeecCCceEEEEEecCCCEEEEEe--CCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEec
Q psy12614 97 DMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGT--EQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGC 174 (708)
Q Consensus 97 d~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~--~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~ 174 (708)
++........+.........++++|...+|.... ..+.|...++...... ......-.....+++.+.++.|+.+.
T Consensus 105 ~~~g~~~~~~~~~~~~~P~~l~vd~~~g~ly~~~~~~~~~I~r~~~dGs~~~--~l~~~~~~~p~gl~iD~~~~~lYw~d 182 (266)
T d1ijqa1 105 DTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIY--SLVTENIQWPNGITLDLLSGRLYWVD 182 (266)
T ss_dssp ETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEE--EEECSSCSCEEEEEEETTTTEEEEEE
T ss_pred ecCCceEEEEEcCCCCCcceEEEEcccCeEEEeccCCCcceeEeccCCCcee--cccccccceeeEEEeeccccEEEEec
Confidence 9988776666666667789999999777766544 3456777777665553 22333335678999999888888775
Q ss_pred CC--eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCCeeEEEeec
Q psy12614 175 AA--AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTGVQWSDVKT 242 (708)
Q Consensus 175 ~d--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~~~~~~~~~ 242 (708)
.. .|...++............ .......++++.. +. +.+-..++.|...+..+++....+..
T Consensus 183 ~~~~~I~~~~~dG~~~~~~~~~~-----~~~~~p~~lav~~-~~ly~td~~~~~I~~~~~~~g~~~~~~~~ 247 (266)
T d1ijqa1 183 SKLHSISSIDVNGGNRKTILEDE-----KRLAHPFSLAVFE-DKVFWTDIINEAIFSANRLTGSDVNLLAE 247 (266)
T ss_dssp TTTTEEEEEETTSCSCEEEEECT-----TTTSSEEEEEEET-TEEEEEETTTTEEEEEETTTCCCCEEEEC
T ss_pred CCcCEEEEEECCCCCEEEEEeCC-----CcccccEEEEEEC-CEEEEEECCCCeEEEEECCCCcceEEEEc
Confidence 44 8998898644433222222 1123456777763 45 44445677888888777766555543
|
| >d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal domain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nitrous oxide reductase, N-terminal domain family: Nitrous oxide reductase, N-terminal domain domain: Nitrous oxide reductase, N-terminal domain species: Paracoccus denitrificans [TaxId: 266]
Probab=97.83 E-value=0.0003 Score=65.64 Aligned_cols=226 Identities=12% Similarity=0.106 Sum_probs=139.4
Q ss_pred EEEEcC---CCCEEEEEe-CCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe----CCEEEEEcCC------------
Q psy12614 31 CIACEP---KSSRLAVSR-ADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF----NDRLFSGGLQ------------ 90 (708)
Q Consensus 31 ~~~~s~---~~~~la~~~-~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~----~~~l~s~~~d------------ 90 (708)
.+++.. ||+||.+.. .+++|.+-|+.+.+... +..-.. ...+..+... -.+++..+.+
T Consensus 89 ~~S~TdGtyDGrylFVNDkan~RVAvIdl~~fkt~k-Ii~iPn-~~~~HG~r~~~~p~T~YV~~~~e~~vP~pndg~~l~ 166 (459)
T d1fwxa2 89 HMSFTEGKYDGRFLFMNDKANTRVARVRCDVMKCDA-ILEIPN-AKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNME 166 (459)
T ss_dssp EEEEETTEEEEEEEEEEETTTTEEEEEETTTTEEEE-EEECSS-CCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTT
T ss_pred cccccCCccceeEEEEEcCCCceEEEEECcceeeeE-EEecCC-CCCCceeecccCCCeEEEEccCccccccCCCCcccc
Confidence 556654 899998875 57899999999988655 333222 3678887765 5566666553
Q ss_pred ------CcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCC---------------cEEEEEccC-------
Q psy12614 91 ------GFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQG---------------HINLFQISD------- 142 (708)
Q Consensus 91 ------~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~---------------~i~iwd~~~------- 142 (708)
+.+.++|.++++....+..- +....+++++||+++++.+.+. .+.++++..
T Consensus 167 d~~~y~~~~t~ID~~tm~V~~QV~V~-g~ld~~~~s~dGK~af~TsyNSE~g~~l~e~ta~e~D~i~V~n~~rie~av~~ 245 (459)
T d1fwxa2 167 DVANYVNVFTAVDADKWEVAWQVLVS-GNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAA 245 (459)
T ss_dssp CGG-EEEEEEEEETTTTEEEEEEEES-SCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHH
T ss_pred chhhcceEEEEEecCCceEEEEeeeC-CChhccccCCCCCEEEEEeccccCCcchhhcccccceEEEEechHHhHHhhhc
Confidence 23678899998887776643 4577899999999998876532 134444421
Q ss_pred -------CcEEEE----------EecccccccEEEEEECCCCCEEEEecCC--eEEEEEcCCCceE--------EEEEec
Q psy12614 143 -------EGLLYE----------KLLDRQQGRILCTAWHSSGDYLVTGCAA--AVRVWDIHKGHAI--------HKMSLD 195 (708)
Q Consensus 143 -------~~~~~~----------~~~~~~~~~v~~~~~s~d~~~l~~~~~d--~i~iwd~~~~~~~--------~~~~~~ 195 (708)
+-.+.. ..+ .-......+.++|||+++++++.- ++.++|+++-... ..+...
T Consensus 246 Gk~~eingV~VVD~~~~~~~~v~~yI-PVpKsPHGV~vSPDGKyi~VaGKLs~tVSViD~~Ki~~~~~~~~~~~~~~~~e 324 (459)
T d1fwxa2 246 GDYQELNGVKVVDGRKEASSLFTRYI-PIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAE 324 (459)
T ss_dssp TCSEEETTEEEEECSGG--CSSEEEE-EEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCC-GGGGEEEC
T ss_pred CCcEEeCCceeecccccCCcceeEEE-ecCCCCCceEECCCCCEEEEeCCcCCcEEEEEehhhhhhhcccCCccccEEee
Confidence 100000 001 112234567899999999888764 9999998642111 000000
Q ss_pred ccCCCCCceeEEEEEEccCCE-EEEEcCCCcEEEEeCCCC----------eeEEEeecccc-----CeEEEEEeCCCCEE
Q psy12614 196 KSSKFSKNTAVWCVAFCADFT-IITGDSGGFVRFWDGKTG----------VQWSDVKTHKK-----DILALTVSEDENYL 259 (708)
Q Consensus 196 ~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~i~~wd~~~~----------~~~~~~~~~~~-----~i~~~~~s~~~~~l 259 (708)
. ...-.....+|..+|. ..+.--|.+|.-|++... ..+..+.-|-. ....-...|||++|
T Consensus 325 ~----elglgPLht~fd~~g~aytslfids~v~kw~~~~~~~~~~~~~~~~v~~k~~v~y~~gh~~~~~g~t~~~dgk~l 400 (459)
T d1fwxa2 325 P----ELGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWL 400 (459)
T ss_dssp C----BCCSCEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEE
T ss_pred c----ccCcCccccccCCCceEEEEeeccceEEEEecchhhhhhccccCCcceeccccccCCCCCccCcCCcCCCCCCEE
Confidence 0 1123345678888886 556678999999997432 34444443321 11111236889999
Q ss_pred EEEec
Q psy12614 260 YCAGV 264 (708)
Q Consensus 260 ~~~~~ 264 (708)
++...
T Consensus 401 ~~~nk 405 (459)
T d1fwxa2 401 VCLSK 405 (459)
T ss_dssp EEEES
T ss_pred EEecc
Confidence 98753
|
| >d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: YWTD domain family: YWTD domain domain: Nidogen species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.78 E-value=0.011 Score=52.57 Aligned_cols=224 Identities=11% Similarity=0.014 Sum_probs=132.6
Q ss_pred CEEEEEeCCCcEEEEEccCCcEE---EEEecccccccEEEEEECCCCCEEEEecCC--eEEEEEcCCCceEEEEEecccC
Q psy12614 124 RLLAAGTEQGHINLFQISDEGLL---YEKLLDRQQGRILCTAWHSSGDYLVTGCAA--AVRVWDIHKGHAIHKMSLDKSS 198 (708)
Q Consensus 124 ~~la~~~~d~~i~iwd~~~~~~~---~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d--~i~iwd~~~~~~~~~~~~~~~~ 198 (708)
.+|+.+. .+.|+-.+++..... ....+..+...+..++|.+..+.|+..... .|...++..+.....+...
T Consensus 2 ~fLl~s~-~~~I~~~~ld~~~~~~~~~~~~~~~~~~~~~~ld~D~~~~~iywsd~~~~~I~~~~l~g~~~~~v~~~~--- 77 (263)
T d1npea_ 2 THLLFAQ-TGKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQD--- 77 (263)
T ss_dssp EEEEEEE-EEEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTT---
T ss_pred CEEEEeC-CCeEEEEECCCccccccccccccccCCCcEEEEEEEeCCCEEEEEECCCCeEEEEEcccCCcEEEEEec---
Confidence 3444433 356777777644321 001222334457889999888888776544 8888888765544333222
Q ss_pred CCCCceeEEEEEEcc-CCEEE-EEcCCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEecC-C--eEEEEEc
Q psy12614 199 KFSKNTAVWCVAFCA-DFTII-TGDSGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVD-P--TVVCFQR 273 (708)
Q Consensus 199 ~~~~~~~v~~~~~~~-~~~l~-~~~~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d-g--~i~iw~~ 273 (708)
...+.++++.. .+++. +-...+.|.+.++........+.........+++.|...+++..... + .|..-++
T Consensus 78 ----~~~p~~iAvD~~~~~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~p~~l~vdp~~g~ly~t~~~~~~~~I~r~~~ 153 (263)
T d1npea_ 78 ----LGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHM 153 (263)
T ss_dssp ----CCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEET
T ss_pred ----cccccEEEEeccCCeEEEeccCCCEEEEEecCCceEEEEecccccCCcEEEEecccCcEEEeecCCCCcEEEEecC
Confidence 35678888875 34554 55567899999987554433333334678899999988888765433 2 3444455
Q ss_pred cCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe--CCEE-EEEcCCCeEEEEeCCCCceeecCccCCCCceEEEE
Q psy12614 274 TRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH--GNRL-YSGGLDSYLSLSYYPPKTLVKYPCTLAQSTPVSLA 350 (708)
Q Consensus 274 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~l-~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~s 350 (708)
.. .. ........-....+|+++ ++.| .+-...+.|...++++...+.+......+..+++.
T Consensus 154 dG--------~~--------~~~i~~~~~~~P~glaiD~~~~~lYw~d~~~~~I~~~~~~g~~~~~v~~~~~~P~~lav~ 217 (263)
T d1npea_ 154 DG--------TN--------RRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEGLQYPFAVTSY 217 (263)
T ss_dssp TS--------CC--------CEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEECCCSEEEEEEE
T ss_pred CC--------CC--------ceeeeeecccccceEEEeecCcEEEEEeCCCCEEEEEECCCCCeEEEECCCCCcEEEEEE
Confidence 44 21 111122223456788887 5555 44456788999999887655554333444455554
Q ss_pred cCCcEEEEE--cCCeEEEEEecCCC
Q psy12614 351 KDIQHVLLQ--YTSHLELWSLGSAQ 373 (708)
Q Consensus 351 ~~~~~l~~~--~~~~i~i~~~~~~~ 373 (708)
+..+... ..+.|...+..+++
T Consensus 218 --~~~lYwtd~~~~~I~~~~~~~g~ 240 (263)
T d1npea_ 218 --GKNLYYTDWKTNSVIAMDLAISK 240 (263)
T ss_dssp --TTEEEEEETTTTEEEEEETTTTE
T ss_pred --CCEEEEEECCCCEEEEEECCCCc
Confidence 4444443 56777777776544
|
| >d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Quinoprotein alcohol dehydrogenase, N-terminal domain species: Pseudomonas putida, hk5 [TaxId: 303]
Probab=97.72 E-value=0.031 Score=56.04 Aligned_cols=302 Identities=12% Similarity=0.165 Sum_probs=173.4
Q ss_pred CEEEEEeCCCcEEEEeCCCCCeEEEEEecCC---------CCCcEEEEEEeCCEEEEEcCCCcEEEEECCCCeEeEEEee
Q psy12614 39 SRLAVSRADQSIEIWDISETPHVDRVFIGDP---------LSNSIECLTWFNDRLFSGGLQGFVNEYDMRRLNIKSSTAV 109 (708)
Q Consensus 39 ~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~---------~~~~v~~l~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~ 109 (708)
..|.+++.++.|.-.|..+|+.+= .+.... ....-..++..++.++.+..++.|.-.|..+|+.+.....
T Consensus 67 g~vyv~t~~~~v~AlDa~tG~~lW-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~g~l~Alda~tG~~~w~~~~ 145 (560)
T d1kv9a2 67 GVIYTSMSWSRVIAVDAASGKELW-RYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTLDGRLIALDAKTGKAIWSQQT 145 (560)
T ss_dssp TEEEEEEGGGEEEEEETTTCCEEE-EECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred CEEEEECCCCeEEEEeCCCCCEEE-EECCCCCccccccccccccccCcceeCCeEEEEeCCCEEEEEECCCCcEEeccCc
Confidence 456677788899999999998764 222110 0011123444477899999999999999999999887764
Q ss_pred cCCc-eEEEEEec--CCCEEEEEeC------CCcEEEEEccCCcEEEEEecccc--------------------------
Q psy12614 110 TSGT-CWCLSVHK--KKRLLAAGTE------QGHINLFQISDEGLLYEKLLDRQ-------------------------- 154 (708)
Q Consensus 110 ~~~~-v~~~~~s~--~~~~la~~~~------d~~i~iwd~~~~~~~~~~~~~~~-------------------------- 154 (708)
.... -..+.-.| .+..++.+.. .|.|.-+|.++|+.+........
T Consensus 146 ~~~~~~~~~~~~p~v~~~~vivg~~~~~~~~~G~v~a~D~~TG~~~W~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (560)
T d1kv9a2 146 TDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKL 225 (560)
T ss_dssp SCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHH
T ss_pred cCcccceeeeeeeeeecCcccccccceeccccceEEEEECCCceEEeeeeeccccccCCccccccccccccccccccccc
Confidence 3211 01111111 1223444332 36799999999999865432210
Q ss_pred --cccE-EEEEECCCCCEEEEec--------------------CCeEEEEEcCCCceEEEEEecccCC--CCCceeEEEE
Q psy12614 155 --QGRI-LCTAWHSSGDYLVTGC--------------------AAAVRVWDIHKGHAIHKMSLDKSSK--FSKNTAVWCV 209 (708)
Q Consensus 155 --~~~v-~~~~~s~d~~~l~~~~--------------------~d~i~iwd~~~~~~~~~~~~~~~~~--~~~~~~v~~~ 209 (708)
...+ ..+++.+...+++.+. .+.|.-.|+.+|+....+...+... +.......-+
T Consensus 226 ~~G~~~W~~~s~D~~~~l~y~~tgn~~~~~~~~~~~~~g~n~~s~sivAld~~tG~~~W~~Q~~~~D~wd~d~~~~~~l~ 305 (560)
T d1kv9a2 226 GGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLA 305 (560)
T ss_dssp CEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEE
T ss_pred cCCCCcccccccccccCeeeecCCCCcccccccccccCCccccceeeEEecCCccceeEEEeccccccccccccceeeee
Confidence 0111 1245556666555322 1257778999999887776543111 0011111112
Q ss_pred EEccCC--E--EEEEcCCCcEEEEeCCCCeeEEEeeccc------------------------------------cCeEE
Q psy12614 210 AFCADF--T--IITGDSGGFVRFWDGKTGVQWSDVKTHK------------------------------------KDILA 249 (708)
Q Consensus 210 ~~~~~~--~--l~~~~~dg~i~~wd~~~~~~~~~~~~~~------------------------------------~~i~~ 249 (708)
....++ + ++.+..+|.+.++|..+|+++...+.-. ..-..
T Consensus 306 ~~~~~g~~~~~v~~~~k~G~~~~lDr~tG~~i~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~ 385 (560)
T d1kv9a2 306 ELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHS 385 (560)
T ss_dssp EEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSC
T ss_pred eeecCCceeeeeeecCccceEEEEecCCCcccccccccccccccccChhhccccccccccccccceeeeecccccccccc
Confidence 222344 2 6678889999999999998875432110 00124
Q ss_pred EEEeCCCCEEEEEecC------------------------------------CeEEEEEccCCcccccCCCCCCCCcceE
Q psy12614 250 LTVSEDENYLYCAGVD------------------------------------PTVVCFQRTRKPQVCSTSGPEQGSSVWV 293 (708)
Q Consensus 250 ~~~s~~~~~l~~~~~d------------------------------------g~i~iw~~~~~~~~~~~~g~~~~~~~~~ 293 (708)
.+++|+...++....+ |.|.-||+.+ |+ ..|.
T Consensus 386 ~a~dp~~~~~yvp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~G~l~A~D~~t--------Gk----~~W~ 453 (560)
T d1kv9a2 386 MSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVK--------QK----AAWK 453 (560)
T ss_dssp CEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTT--------TE----EEEE
T ss_pred ccccCCCCeeecccccccceeeccccccccccccccccCcccccCCCCcccccceEEEeCCC--------Ce----Eeee
Confidence 5677887777765433 3455556655 43 3332
Q ss_pred EeEEEeccccceE--EEEEeCCEEEEEcCCCeEEEEeCCCCc-eeecCcc-CCCCceEEEEcCCc-EEEE
Q psy12614 294 RSVNRVIHEGDVK--SLALHGNRLYSGGLDSYLSLSYYPPKT-LVKYPCT-LAQSTPVSLAKDIQ-HVLL 358 (708)
Q Consensus 294 ~~~~~~~~~~~v~--~l~~~~~~l~s~~~d~~i~iw~~~~~~-~~~~~~~-~~~~~~~~~s~~~~-~l~~ 358 (708)
... ..... .++..+.+++.++.||.++.+|.++++ +-++..+ ......+.+..+|+ +|++
T Consensus 454 ~~~-----~~~~~gg~l~TagglVF~G~~dg~l~A~Da~tGe~LW~~~l~~~~~~~P~ty~~dGkqyv~v 518 (560)
T d1kv9a2 454 VPY-----PTHWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEAQSGIVAAPMTFELAGRQYVAI 518 (560)
T ss_dssp EEE-----SSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEE
T ss_pred ccC-----CCCCCCceeEECCCEEEEECCCCcEEEEECCCCcEeEEEECCCCccccCEEEEECCEEEEEE
Confidence 111 11111 233338889999999999999999987 3333312 22345577777885 4443
|
| >d1w6sa_ b.70.1.1 (A:) Methanol dehydrogenase, heavy chain {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Methanol dehydrogenase, heavy chain species: Methylobacterium extorquens [TaxId: 408]
Probab=97.65 E-value=0.041 Score=55.44 Aligned_cols=200 Identities=10% Similarity=0.039 Sum_probs=114.3
Q ss_pred CCEEEEEeCCCcEEEEeC-CCCCeEEEEEecCC---------CCCcEEEEEEe------CCEEEEEcCCCcEEEEECCCC
Q psy12614 38 SSRLAVSRADQSIEIWDI-SETPHVDRVFIGDP---------LSNSIECLTWF------NDRLFSGGLQGFVNEYDMRRL 101 (708)
Q Consensus 38 ~~~la~~~~dg~v~iwd~-~~~~~~~~~~~~h~---------~~~~v~~l~~~------~~~l~s~~~d~~i~vwd~~~~ 101 (708)
|.+.++.+.++.|...|. .+|+.+= .+.... ....-+.+++. +.+++.++.|+.|.-.|.++|
T Consensus 63 g~ly~~t~~~~~v~a~d~~~tG~~~W-~~~~~~~~~~~~~~~~~~~~RGv~~~~~~~~~~~~v~~~t~dg~l~Alda~tG 141 (596)
T d1w6sa_ 63 GKMYIHTSFPNNTFALGLDDPGTILW-QDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAETG 141 (596)
T ss_dssp TEEEEECSTTTCEEEEETTCTTSEEE-EECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTTC
T ss_pred CEEEEeeCCCCcEEEEeCCCCCCEEE-EecCCCCcccccccccccccceeEEecCCCCCceEEEEEeCCCCeEeeccccC
Confidence 433333344567777776 5677653 222110 00011345554 347899999999999999999
Q ss_pred eEeEEEeecC----CceEEEEEecCCCEEEEEeC------CCcEEEEEccCCcEEEEEeccc------------------
Q psy12614 102 NIKSSTAVTS----GTCWCLSVHKKKRLLAAGTE------QGHINLFQISDEGLLYEKLLDR------------------ 153 (708)
Q Consensus 102 ~~~~~~~~~~----~~v~~~~~s~~~~~la~~~~------d~~i~iwd~~~~~~~~~~~~~~------------------ 153 (708)
+.+..+.... ..+++--.- .+..++++.. .|.|+-+|..+|+++.......
T Consensus 142 ~~~w~~~~~d~~~~~~~t~~P~v-~~~~vivg~~~~e~~~~G~v~A~Da~TG~~~W~~~t~~~~~~~~~~~~~~~~~~~~ 220 (596)
T d1w6sa_ 142 ETVWKVENSDIKVGSTLTIAPYV-VKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPHY 220 (596)
T ss_dssp CEEEEEECCCGGGTCBCCSCCEE-ETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGG
T ss_pred ceeccccccccccccccccCCcE-ECCeEEEeeccccccccCceEEEECCCCcEEEEeeccCCccccccccccccccccc
Confidence 9988775221 111110001 1334555543 4889999999999986433211
Q ss_pred ------------------ccccEEEEEECCCCCEEEEecC----------------C-eEEEEEcCCCceEEEEEecccC
Q psy12614 154 ------------------QQGRILCTAWHSSGDYLVTGCA----------------A-AVRVWDIHKGHAIHKMSLDKSS 198 (708)
Q Consensus 154 ------------------~~~~v~~~~~s~d~~~l~~~~~----------------d-~i~iwd~~~~~~~~~~~~~~~~ 198 (708)
....-..+++.+....++.+.. . .|.-.|+.+|+.+..++..+..
T Consensus 221 g~~~~~~~tw~g~~~~~gg~~~W~~~s~D~~~~lvy~~tg~~~p~~~~~r~g~n~ys~sivAlD~~TG~~~W~~Q~~~~D 300 (596)
T d1w6sa_ 221 GQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHD 300 (596)
T ss_dssp CCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTC
T ss_pred cccccccccCCCCceecCCCccccccccccCCCeeecccccccccccccccccccccccccccccccccccccccceecc
Confidence 0001123455566666655432 2 4888899999998887765321
Q ss_pred CC--CCceeEEEEE-EccCC--E--EEEEcCCCcEEEEeCCCCeeEEE
Q psy12614 199 KF--SKNTAVWCVA-FCADF--T--IITGDSGGFVRFWDGKTGVQWSD 239 (708)
Q Consensus 199 ~~--~~~~~v~~~~-~~~~~--~--l~~~~~dg~i~~wd~~~~~~~~~ 239 (708)
.. .......-+. ...+| . ++..+.+|.+.++|..+|+.+..
T Consensus 301 ~Wd~d~~~~~~l~d~~~~~G~~~~~v~~~~k~G~~~vlDr~tG~~i~~ 348 (596)
T d1w6sa_ 301 EWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSA 348 (596)
T ss_dssp SSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEE
T ss_pred ccCCccccceeeeeccccccccccceeccccccceeeecCCCCceeee
Confidence 10 0011111111 22344 2 67889999999999999988754
|
| >d1utca2 b.69.6.1 (A:4-330) Clathrin heavy-chain terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Clathrin heavy-chain terminal domain family: Clathrin heavy-chain terminal domain domain: Clathrin heavy-chain terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=97.60 E-value=0.019 Score=50.34 Aligned_cols=211 Identities=11% Similarity=0.135 Sum_probs=136.0
Q ss_pred CCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCCeEEEEEcCCCceEEEEEecccCCCCCceeEEEEEE
Q psy12614 132 QGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAAAVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAF 211 (708)
Q Consensus 132 d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 211 (708)
..+|.|.|+.++....++.... .+.-.+|..+.||.-+..++.++|+++.+.++..... ..|.-=.|
T Consensus 44 ~~~VvIidl~n~~~~~Rrpi~A-----dsAIMhP~~~IiALrag~~LQiFnletK~klks~~~~--------e~VvfWkW 110 (327)
T d1utca2 44 QAQVVIIDMNDPSNPIRRPISA-----DSAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTMT--------DDVTFWKW 110 (327)
T ss_dssp EEEEEEEETTSTTSCEEEECCC-----SEEEECSSSSEEEEEETTEEEEEETTTTEEEEEEECS--------SCCCEEEE
T ss_pred CceEEEEECCCCCcceecccch-----hhhhcCCCCcEEEEecCCeEEEEehhHhhhhceEEcC--------CCcEEEEe
Confidence 3578889988765433333332 2344679998888777559999999999999888764 34555567
Q ss_pred ccCCEEEEEcCCCcEEEEeCCCC-eeEEEeecc----ccCeEEEEEeCCCCEEEEEe-------cCCeEEEEEccCCccc
Q psy12614 212 CADFTIITGDSGGFVRFWDGKTG-VQWSDVKTH----KKDILALTVSEDENYLYCAG-------VDPTVVCFQRTRKPQV 279 (708)
Q Consensus 212 ~~~~~l~~~~~dg~i~~wd~~~~-~~~~~~~~~----~~~i~~~~~s~~~~~l~~~~-------~dg~i~iw~~~~~~~~ 279 (708)
..+..|+..+. ..|+-|+++.. .+.+.+.-| ...|.....+++.++++..+ -.|.+.+|..+.
T Consensus 111 is~~~L~lVT~-taVYHW~~~g~s~P~k~fdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~i~G~mQLYS~er---- 185 (327)
T d1utca2 111 ISLNTVALVTD-NAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR---- 185 (327)
T ss_dssp SSSSEEEEECS-SEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTT----
T ss_pred cCCCEEEEEcC-CceEEEcccCCCCchhhhhhcccccCceEEEEEECCCCCEEEEEeEecCCCceeEEEEEEEecc----
Confidence 77776555543 56999999543 355555433 35778888899999887543 236889999987
Q ss_pred ccCCCCCCCCcceEEeEEEeccccceEEEEEeC-----CEEEE---EcCCCeEEEEeCCCCc---------eeecCc-c-
Q psy12614 280 CSTSGPEQGSSVWVRSVNRVIHEGDVKSLALHG-----NRLYS---GGLDSYLSLSYYPPKT---------LVKYPC-T- 340 (708)
Q Consensus 280 ~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~~-----~~l~s---~~~d~~i~iw~~~~~~---------~~~~~~-~- 340 (708)
+ ....+.+|.+....+...| ..++. +...+.+.+-++.... ...+.- +
T Consensus 186 ----~---------~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~~~kLhIiEig~~~~g~~~f~kk~vdi~fppe 252 (327)
T d1utca2 186 ----K---------VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPE 252 (327)
T ss_dssp ----T---------EEEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSCCCTTCCCCCCEEEECCCCTT
T ss_pred ----C---------cCccccceeeeeEEEEcCCCCCCceEEEEEECCCCCcEEEEEEcCCCccCCCCCcceeEEEECCcc
Confidence 4 4566777766555554441 12222 2233688888876532 011110 1
Q ss_pred --CCCCceEEEEcCCcEEEE-EcCCeEEEEEecCCC
Q psy12614 341 --LAQSTPVSLAKDIQHVLL-QYTSHLELWSLGSAQ 373 (708)
Q Consensus 341 --~~~~~~~~~s~~~~~l~~-~~~~~i~i~~~~~~~ 373 (708)
..-+-.+.+|+.-.++.. ..-|.+++||++++.
T Consensus 253 a~~DFPvamqvs~kygiiyviTK~G~i~lyDleTgt 288 (327)
T d1utca2 253 AQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGT 288 (327)
T ss_dssp CTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCC
T ss_pred ccCCcEEEEEeeccCCEEEEEecCcEEEEEEccccc
Confidence 111235666776666554 799999999999977
|
| >d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Quinoprotein alcohol dehydrogenase, N-terminal domain species: Comamonas testosteroni [TaxId: 285]
Probab=97.55 E-value=0.056 Score=54.32 Aligned_cols=307 Identities=11% Similarity=0.103 Sum_probs=168.0
Q ss_pred CEEEEEeCCCcEEEEeCCCCCeEEEEEecCC--------CCCcE-EEEEEeCCEEEEEcCCCcEEEEECCCCeEeEEEee
Q psy12614 39 SRLAVSRADQSIEIWDISETPHVDRVFIGDP--------LSNSI-ECLTWFNDRLFSGGLQGFVNEYDMRRLNIKSSTAV 109 (708)
Q Consensus 39 ~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~--------~~~~v-~~l~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~ 109 (708)
..|.+++.++.|.-.|..+|+.+= .+.... ....+ ..+++.++.++.++.|+.+.-.|.++|+.+.....
T Consensus 78 g~vyv~t~~~~v~AlDa~TG~~~W-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~t~~g~l~alda~tG~~~W~~~~ 156 (573)
T d1kb0a2 78 GIMYVSASWSVVHAIDTRTGNRIW-TYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAWDGRLIALDAATGKEVWHQNT 156 (573)
T ss_dssp TEEEEECGGGCEEEEETTTTEEEE-EECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECTTSEEEEEETTTCCEEEEEET
T ss_pred CEEEEECCCCeEEEEeCCCCCeEE-EeCCCCCcccccccccccccccceEECCcEEEEecccceeeeccccccceecccC
Confidence 356677778899999999998764 222110 00111 23455577888899999999999999998876653
Q ss_pred cCCceE--EEEEec--CCCEEEEEeC------CCcEEEEEccCCcEEEEEecccc-------------------------
Q psy12614 110 TSGTCW--CLSVHK--KKRLLAAGTE------QGHINLFQISDEGLLYEKLLDRQ------------------------- 154 (708)
Q Consensus 110 ~~~~v~--~~~~s~--~~~~la~~~~------d~~i~iwd~~~~~~~~~~~~~~~------------------------- 154 (708)
...... .+.-.| -+..+++++. .|.|+-+|..+|+.+........
T Consensus 157 ~~~~~~~~~~~~~p~v~~~~vivg~~~~~~~~~G~v~a~D~~TG~~~W~~~t~~~~~~~~~~~~~~~~~~~t~~~~~~~~ 236 (573)
T d1kb0a2 157 FEGQKGSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWW 236 (573)
T ss_dssp TTTCCSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHH
T ss_pred ccCCcceEEeecceEEEeccEEEeeccccccccceEEEEecCCccceeeeeeccccCCCCCCcccccccccccCCCCcee
Confidence 211110 011111 1234455432 46799999999998864322110
Q ss_pred ----cccE-EEEEECCCCCEEEEecC-------------------C-eEEEEEcCCCceEEEEEecccCC--CCCceeEE
Q psy12614 155 ----QGRI-LCTAWHSSGDYLVTGCA-------------------A-AVRVWDIHKGHAIHKMSLDKSSK--FSKNTAVW 207 (708)
Q Consensus 155 ----~~~v-~~~~~s~d~~~l~~~~~-------------------d-~i~iwd~~~~~~~~~~~~~~~~~--~~~~~~v~ 207 (708)
.+.+ ...++.++...++.... . .|.-.|+++|+.....+..+... +.......
T Consensus 237 ~~~~G~~vW~~~s~D~~~g~~~~~~g~~~~~~~~~~~~~~g~~~~~~svvAld~~tG~~~W~~q~~~~d~wd~d~~~~~~ 316 (573)
T d1kb0a2 237 EAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMI 316 (573)
T ss_dssp HHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCE
T ss_pred ecCCCCcccccceEchhhCeeeeccCCCccccccccccccccccccceEEEecccchheeecccccCcccccccccceee
Confidence 0111 12445555555543221 1 47778888888877766432110 00111112
Q ss_pred EEEEccCC--E--EEEEcCCCcEEEEeCCCCeeEEEeeccc-----------------------------------cCeE
Q psy12614 208 CVAFCADF--T--IITGDSGGFVRFWDGKTGVQWSDVKTHK-----------------------------------KDIL 248 (708)
Q Consensus 208 ~~~~~~~~--~--l~~~~~dg~i~~wd~~~~~~~~~~~~~~-----------------------------------~~i~ 248 (708)
......++ . ++.++.+|.+.++|..+|+.+....... ..-.
T Consensus 317 l~~~~~~g~~~~~v~~~~k~G~l~~lDr~tGe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~Gg~~w~ 396 (573)
T d1kb0a2 317 LADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWH 396 (573)
T ss_dssp EEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSS
T ss_pred ecceecCCCceeeeeeccccceeEEeccccccccccccccccccccccccccceeeeeeccccccceEEeecccCCcccc
Confidence 22222344 2 6778889999999999998875442110 0112
Q ss_pred EEEEeCCCCEEEEEecCCeEEEEEccCCcccccC-----------------------------------CCCCCCCcceE
Q psy12614 249 ALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCST-----------------------------------SGPEQGSSVWV 293 (708)
Q Consensus 249 ~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~-----------------------------------~g~~~~~~~~~ 293 (708)
.++++|+...++....+....++........... .|+ ..|.
T Consensus 397 ~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~~~~~~G~l~AiD~~tGk----~~W~ 472 (573)
T d1kb0a2 397 PMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQK----AAWS 472 (573)
T ss_dssp CCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTE----EEEE
T ss_pred ccccCCCcceEEeeccccceeeecccccccccCCCCccccccccccccccccCCCCCCCcccEEEeCCCCCc----eEee
Confidence 3578888888877655544433332210000000 022 2221
Q ss_pred EeEEEecccc-ceEEEEEeCCEEEEEcCCCeEEEEeCCCCc-eeecCcc-CCCCceEEEEcCCc
Q psy12614 294 RSVNRVIHEG-DVKSLALHGNRLYSGGLDSYLSLSYYPPKT-LVKYPCT-LAQSTPVSLAKDIQ 354 (708)
Q Consensus 294 ~~~~~~~~~~-~v~~l~~~~~~l~s~~~d~~i~iw~~~~~~-~~~~~~~-~~~~~~~~~s~~~~ 354 (708)
. ..... .--.++..+.++++++.|+.++.+|.++++ +.++..+ ......+.+..+|+
T Consensus 473 ~----~~~~p~~gg~lstagglVF~G~~dg~l~A~Da~TGe~LW~~~~~~~~~~~P~ty~~~Gk 532 (573)
T d1kb0a2 473 V----EHVSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAAPSTYMVDGR 532 (573)
T ss_dssp E----EESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTE
T ss_pred e----cCCCCCCCceEEEcCCEEEEECCCCeEEEEECCCCcEeEEEECCCCccccCEEEEECCE
Confidence 1 11000 011233347889999999999999999987 3333311 22334577777876
|
| >d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Galactose oxidase, central domain family: Galactose oxidase, central domain domain: Galactose oxidase, central domain species: Fungi (Fusarium sp.) [TaxId: 29916]
Probab=97.37 E-value=0.009 Score=57.18 Aligned_cols=157 Identities=10% Similarity=-0.023 Sum_probs=92.2
Q ss_pred ceEEEEEecCCCEEEEEeCCC-----------cEEEEEccCCcEEEEEec-ccccccEEEEEECCCCCEEEEecCC--eE
Q psy12614 113 TCWCLSVHKKKRLLAAGTEQG-----------HINLFQISDEGLLYEKLL-DRQQGRILCTAWHSSGDYLVTGCAA--AV 178 (708)
Q Consensus 113 ~v~~~~~s~~~~~la~~~~d~-----------~i~iwd~~~~~~~~~~~~-~~~~~~v~~~~~s~d~~~l~~~~~d--~i 178 (708)
.+...+...+|+.++.|+.+. .+.+||..++........ ..+.......++.++++.++.|+.+ .+
T Consensus 21 ~~~~a~~~~~gkv~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~i~v~Gg~~~~~~ 100 (387)
T d1k3ia3 21 PAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKT 100 (387)
T ss_dssp CSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCE
T ss_pred ccEEEEEeeCCEEEEEEeecCcccCCCCCceeEEEEEECCCCcEeecCCCCCCcccceeEEEEecCCcEEEeecCCCcce
Confidence 344445556788888877421 377999998765321111 2233333466788999999998776 89
Q ss_pred EEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCC------CcEEEEeCCCCeeEEEeec---------
Q psy12614 179 RVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSG------GFVRFWDGKTGVQWSDVKT--------- 242 (708)
Q Consensus 179 ~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~d------g~i~~wd~~~~~~~~~~~~--------- 242 (708)
.+||..+..-...-.... ...-...+..+||+ ++.|+.. ..+.+||..+.+-...-..
T Consensus 101 ~~yd~~~~~w~~~~~~~~------~r~~~~~~~~~dG~v~v~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~ 174 (387)
T d1k3ia3 101 SLYDSSSDSWIPGPDMQV------ARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTAD 174 (387)
T ss_dssp EEEEGGGTEEEECCCCSS------CCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCC
T ss_pred eEecCccCcccccccccc------cccccceeeecCCceeeeccccccccccceeeeecCCCCceeecCCCccccccccc
Confidence 999998876543221111 22234567778887 4555432 3689999887754321100
Q ss_pred cc-----cCeEEEEEeCCCCEEEEEecCCeEEEEEccC
Q psy12614 243 HK-----KDILALTVSEDENYLYCAGVDPTVVCFQRTR 275 (708)
Q Consensus 243 ~~-----~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~ 275 (708)
+. ..-..+...++++.++.++..+.+..++..+
T Consensus 175 ~~~~~~~~~~~~~~~~~~G~~~~~g~~~~~~~~~~~~~ 212 (387)
T d1k3ia3 175 KQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGS 212 (387)
T ss_dssp TTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTT
T ss_pred ccceeeccceeEEEEeCCCCEEEecCcCCcEEecCccc
Confidence 00 0111223345677777777666677776665
|
| >d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Methanol dehydrogenase, heavy chain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=97.34 E-value=0.043 Score=55.03 Aligned_cols=236 Identities=14% Similarity=0.097 Sum_probs=138.3
Q ss_pred CEEEEEeCCCcEEEEeCCCCCeEEEEEe-cCCCCCcEEEE-EEeCCEEEEEc------CCCcEEEEECCCCeEeEEEeec
Q psy12614 39 SRLAVSRADQSIEIWDISETPHVDRVFI-GDPLSNSIECL-TWFNDRLFSGG------LQGFVNEYDMRRLNIKSSTAVT 110 (708)
Q Consensus 39 ~~la~~~~dg~v~iwd~~~~~~~~~~~~-~h~~~~~v~~l-~~~~~~l~s~~------~d~~i~vwd~~~~~~~~~~~~~ 110 (708)
..|+.++.||.+.--|..+|+.+-..-. .......++.- ...++.++.+. .+|.|.-+|+.+|+.+..+...
T Consensus 116 ~~i~~~~~~g~l~alda~tG~~~w~~~~~~~~~~~~~t~~p~v~~~~vivg~~~~~~~~~G~v~a~D~~TG~~~W~~~t~ 195 (571)
T d2ad6a1 116 GQIVKKQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFAT 195 (571)
T ss_dssp TEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEESS
T ss_pred CeEEEEeCCCcEEeeehhhhhhhccccccccccccceeecCeEeCCeEEEeeccccccccCcEEEEECCCCcEEEEEecc
Confidence 4577778899999999999987642211 11101222221 12266666665 3788999999999998876532
Q ss_pred -------------------------------------CCce-EEEEEecCCCEEEEEeC----------------CCcEE
Q psy12614 111 -------------------------------------SGTC-WCLSVHKKKRLLAAGTE----------------QGHIN 136 (708)
Q Consensus 111 -------------------------------------~~~v-~~~~~s~~~~~la~~~~----------------d~~i~ 136 (708)
.+.+ ..+++.++...+..+.. ...+.
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gg~vW~~~s~D~~~g~~y~~tg~~~p~~~~~r~g~n~~s~svv 275 (571)
T d2ad6a1 196 GSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIW 275 (571)
T ss_dssp SCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEE
T ss_pred CCcccccccccccccccccCcccccccccCCcccccCCCccccccccchhcCeeeeecccccCcccccccccccccccee
Confidence 1122 23577777777766544 34578
Q ss_pred EEEccCCcEEEEEecccccc-------cEEEEEECCCCC---EEEEecCC-eEEEEEcCCCceEEEEEecccCC------
Q psy12614 137 LFQISDEGLLYEKLLDRQQG-------RILCTAWHSSGD---YLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSK------ 199 (708)
Q Consensus 137 iwd~~~~~~~~~~~~~~~~~-------~v~~~~~s~d~~---~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~------ 199 (708)
-.|.++|+.........|.. .........+++ .++..+.+ .+.++|..+|+.+..........
T Consensus 276 Ald~~TG~~~W~~q~~~~D~Wd~D~~~~~~l~~~~~~g~~~~~v~~~~k~G~l~vlDr~tG~~i~~~~~~~~~~~~~~~~ 355 (571)
T d2ad6a1 276 GRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVD 355 (571)
T ss_dssp EEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEEC
T ss_pred eeeccchhheecccccCccccccccccccceeeeeccCccccceeeccccceEEEEecCCCcEeeeeccCCccccccccc
Confidence 88999999886555444321 111112222443 45667777 99999999999886543321000
Q ss_pred ---------------CCCceeE-----------EEEEEccCCE-EEEEc-------------------------------
Q psy12614 200 ---------------FSKNTAV-----------WCVAFCADFT-IITGD------------------------------- 221 (708)
Q Consensus 200 ---------------~~~~~~v-----------~~~~~~~~~~-l~~~~------------------------------- 221 (708)
....... ...+++|+.. ++...
T Consensus 356 ~~~~~~i~~~~~~~~~~~~g~~~~p~~~Gg~~w~~~a~dP~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (571)
T d2ad6a1 356 LKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGP 435 (571)
T ss_dssp TTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECT
T ss_pred ccccccccCcccccccccCceEEEeccccccccccceECCCCceEEEeccccccccccccccccCCccccccceeecccc
Confidence 0000000 0134555432 22111
Q ss_pred ------CCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccC
Q psy12614 222 ------SGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTR 275 (708)
Q Consensus 222 ------~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~ 275 (708)
..|.|.-+|+.+|+.+-...... ...+-..+-.+.++++++.||.++-+|.++
T Consensus 436 ~~~~~~~~G~l~AiD~~TG~~~W~~~~~~-~~~~g~l~TagglVf~G~~dg~l~A~Da~t 494 (571)
T d2ad6a1 436 NGPTKKEMGQIRAFDLTTGKAKWTKWEKF-AAWGGTLYTKGGLVWYATLDGYLKALDNKD 494 (571)
T ss_dssp TSTTSCCCEEEEEECTTTCCEEEEEEESS-CCCSBCEEETTTEEEEECTTSEEEEEETTT
T ss_pred CCcccCCcccEEEeccCCCceeeEcCCCC-CCCcceeEecCCEEEEECCCCeEEEEECCC
Confidence 12568889999998876654222 211112233456888999999999999999
|
| >d1w6sa_ b.70.1.1 (A:) Methanol dehydrogenase, heavy chain {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Methanol dehydrogenase, heavy chain species: Methylobacterium extorquens [TaxId: 408]
Probab=97.28 E-value=0.093 Score=52.76 Aligned_cols=236 Identities=12% Similarity=0.125 Sum_probs=141.3
Q ss_pred CEEEEEeCCCcEEEEeCCCCCeEEEEEecC-CCCCcEEE-EEEeCCEEEEEcC------CCcEEEEECCCCeEeEEEeec
Q psy12614 39 SRLAVSRADQSIEIWDISETPHVDRVFIGD-PLSNSIEC-LTWFNDRLFSGGL------QGFVNEYDMRRLNIKSSTAVT 110 (708)
Q Consensus 39 ~~la~~~~dg~v~iwd~~~~~~~~~~~~~h-~~~~~v~~-l~~~~~~l~s~~~------d~~i~vwd~~~~~~~~~~~~~ 110 (708)
.++..++.|+.|.-.|..+|+.+-..-.+. .....++. -.+.++.++++.. .|.|+-+|+.+|+.+.++...
T Consensus 122 ~~v~~~t~dg~l~Alda~tG~~~w~~~~~d~~~~~~~t~~P~v~~~~vivg~~~~e~~~~G~v~A~Da~TG~~~W~~~t~ 201 (596)
T d1w6sa_ 122 ALILKTQLDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYAT 201 (596)
T ss_dssp CEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESS
T ss_pred eEEEEEeCCCCeEeeccccCceeccccccccccccccccCCcEECCeEEEeeccccccccCceEEEECCCCcEEEEeecc
Confidence 468888889999999999999876332221 10112222 1222777777653 489999999999999876421
Q ss_pred C-------------------------------------Cce-EEEEEecCCCEEEEEeC----------------CCcEE
Q psy12614 111 S-------------------------------------GTC-WCLSVHKKKRLLAAGTE----------------QGHIN 136 (708)
Q Consensus 111 ~-------------------------------------~~v-~~~~~s~~~~~la~~~~----------------d~~i~ 136 (708)
. ..+ ..+++.+...++..+.. ...|.
T Consensus 202 ~~~~~~~~~~~~~~~~~~~g~~~~~~~tw~g~~~~~gg~~~W~~~s~D~~~~lvy~~tg~~~p~~~~~r~g~n~ys~siv 281 (596)
T d1w6sa_ 202 GPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIF 281 (596)
T ss_dssp SCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEE
T ss_pred CCccccccccccccccccccccccccccCCCCceecCCCccccccccccCCCeeeccccccccccccccccccccccccc
Confidence 1 112 24567777777766543 23477
Q ss_pred EEEccCCcEEEEEeccccccc-------EEEEE-ECCCC---CEEEEecCC-eEEEEEcCCCceEEEEEecccC------
Q psy12614 137 LFQISDEGLLYEKLLDRQQGR-------ILCTA-WHSSG---DYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSS------ 198 (708)
Q Consensus 137 iwd~~~~~~~~~~~~~~~~~~-------v~~~~-~s~d~---~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~------ 198 (708)
-.|+.+|+.........|... ..-+. -..+| +.++....+ .+.++|..+|+.+.........
T Consensus 282 AlD~~TG~~~W~~Q~~~~D~Wd~d~~~~~~l~d~~~~~G~~~~~v~~~~k~G~~~vlDr~tG~~i~~~~~~~~~~~~~~~ 361 (596)
T d1w6sa_ 282 GRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFKSV 361 (596)
T ss_dssp EEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEE
T ss_pred ccccccccccccccceeccccCCccccceeeeeccccccccccceeccccccceeeecCCCCceeeeccccccccccccc
Confidence 889999999865555555321 11111 22344 356777777 9999999999988655432100
Q ss_pred ---------------CCCCcee-E----------EEEEEccCCE-EEEE------------------------------c
Q psy12614 199 ---------------KFSKNTA-V----------WCVAFCADFT-IITG------------------------------D 221 (708)
Q Consensus 199 ---------------~~~~~~~-v----------~~~~~~~~~~-l~~~------------------------------~ 221 (708)
.+.+... + ..++++|+.. +... .
T Consensus 362 d~~~~~p~~~~~~~~~~~~~~~~i~pg~~Gg~nw~~~a~dp~~~l~yvp~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~ 441 (596)
T d1w6sa_ 362 DLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYPG 441 (596)
T ss_dssp CTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEEC
T ss_pred cccccccccCccccccCCccceeEecccccccccCccccCCCCceEEecccccccccccccccccccccccccccccccC
Confidence 0000000 0 1123444331 1110 0
Q ss_pred ---------CCCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccC
Q psy12614 222 ---------SGGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTR 275 (708)
Q Consensus 222 ---------~dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~ 275 (708)
..|.|.-||+.+|+.+-.... .....+-.++-.+.+++.|+.||.++-+|..+
T Consensus 442 ~~g~~~~~~~~G~l~A~D~~TG~~~W~~~~-~~~~~gg~lsTagglVF~G~~Dg~l~A~Da~T 503 (596)
T d1w6sa_ 442 PKGDRQNYEGLGQIKAYNAITGDYKWEKME-RFAVWGGTMATAGDLVFYGTLDGYLKARDSDT 503 (596)
T ss_dssp TTSBTTTTBCCEEEEEECTTTCCEEEEEEE-SSCCCSBCEEETTTEEEEECTTSEEEEEETTT
T ss_pred cccCcccCCCcceEEEEeCCCCceecccCC-CCCCccceeEecCCEEEEECCCCeEEEEECCC
Confidence 125688899999988765542 22222223344567888999999999999999
|
| >d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Galactose oxidase, central domain family: Galactose oxidase, central domain domain: Galactose oxidase, central domain species: Fungi (Fusarium sp.) [TaxId: 29916]
Probab=97.15 E-value=0.11 Score=49.13 Aligned_cols=116 Identities=14% Similarity=0.180 Sum_probs=70.3
Q ss_pred EEEEccCCE-EEEEcCC-----C------cEEEEeCCCCeeEE--Ee-eccccCeEEEEEeCCCCEEEEEecC-CeEEEE
Q psy12614 208 CVAFCADFT-IITGDSG-----G------FVRFWDGKTGVQWS--DV-KTHKKDILALTVSEDENYLYCAGVD-PTVVCF 271 (708)
Q Consensus 208 ~~~~~~~~~-l~~~~~d-----g------~i~~wd~~~~~~~~--~~-~~~~~~i~~~~~s~~~~~l~~~~~d-g~i~iw 271 (708)
..+...+|+ ++.|+.+ + .+.+||..+++-.. .. ..+.......++.++++.++.|+.+ ..+.+|
T Consensus 24 ~a~~~~~gkv~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~i~v~Gg~~~~~~~~y 103 (387)
T d1k3ia3 24 AAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSLY 103 (387)
T ss_dssp EEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEEE
T ss_pred EEEEeeCCEEEEEEeecCcccCCCCCceeEEEEEECCCCcEeecCCCCCCcccceeEEEEecCCcEEEeecCCCcceeEe
Confidence 344455777 5555532 1 36789998875422 11 2233334466788999999888765 589999
Q ss_pred EccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEEe-CCEEEEEcCC------CeEEEEeCCCCceeec
Q psy12614 272 QRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLALH-GNRLYSGGLD------SYLSLSYYPPKTLVKY 337 (708)
Q Consensus 272 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~~-~~~l~s~~~d------~~i~iw~~~~~~~~~~ 337 (708)
|..+ . .|.....+............. +..++.++.+ ..+.+||..+.....+
T Consensus 104 d~~~--------~------~w~~~~~~~~~r~~~~~~~~~dG~v~v~GG~~~~~~~~~~v~~yd~~~~~W~~~ 162 (387)
T d1k3ia3 104 DSSS--------D------SWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSL 162 (387)
T ss_dssp EGGG--------T------EEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEE
T ss_pred cCcc--------C------cccccccccccccccceeeecCCceeeeccccccccccceeeeecCCCCceeec
Confidence 9987 3 454443333332233333333 7777777653 3688999988775443
|
| >d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal domain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nitrous oxide reductase, N-terminal domain family: Nitrous oxide reductase, N-terminal domain domain: Nitrous oxide reductase, N-terminal domain species: Paracoccus denitrificans [TaxId: 266]
Probab=97.15 E-value=0.098 Score=48.54 Aligned_cols=184 Identities=11% Similarity=0.041 Sum_probs=120.2
Q ss_pred CCEEEEEc-CCCcEEEEECCCCeEeEEEe-ecCCceEEEEEec--CCCEEEEEeCCC------------------cEEEE
Q psy12614 81 NDRLFSGG-LQGFVNEYDMRRLNIKSSTA-VTSGTCWCLSVHK--KKRLLAAGTEQG------------------HINLF 138 (708)
Q Consensus 81 ~~~l~s~~-~d~~i~vwd~~~~~~~~~~~-~~~~~v~~~~~s~--~~~~la~~~~d~------------------~i~iw 138 (708)
|++|++.. .++.|.+-|+.+.++...+. .....+..++..+ +..|++..+.+. .+.++
T Consensus 99 GrylFVNDkan~RVAvIdl~~fkt~kIi~iPn~~~~HG~r~~~~p~T~YV~~~~e~~vP~pndg~~l~d~~~y~~~~t~I 178 (459)
T d1fwxa2 99 GRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAV 178 (459)
T ss_dssp EEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGG-EEEEEEEE
T ss_pred eeEEEEEcCCCceEEEEECcceeeeEEEecCCCCCCceeecccCCCeEEEEccCccccccCCCCccccchhhcceEEEEE
Confidence 66777665 68899999999999877655 3445667777755 455777766532 36778
Q ss_pred EccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC----------------eEEEEEc-------------------
Q psy12614 139 QISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA----------------AVRVWDI------------------- 183 (708)
Q Consensus 139 d~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d----------------~i~iwd~------------------- 183 (708)
|.++.+........+ ....+.+++||+++++.+.+ .+.++++
T Consensus 179 D~~tm~V~~QV~V~g---~ld~~~~s~dGK~af~TsyNSE~g~~l~e~ta~e~D~i~V~n~~rie~av~~Gk~~eingV~ 255 (459)
T d1fwxa2 179 DADKWEVAWQVLVSG---NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVK 255 (459)
T ss_dssp ETTTTEEEEEEEESS---CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEE
T ss_pred ecCCceEEEEeeeCC---ChhccccCCCCCEEEEEeccccCCcchhhcccccceEEEEechHHhHHhhhcCCcEEeCCce
Confidence 999888876555543 45678999999999887643 1344443
Q ss_pred ----CC---CceEEEEEecccCCCCCceeEEEEEEccCCE--EEEEcCCCcEEEEeCCCCe-----------eEEEeecc
Q psy12614 184 ----HK---GHAIHKMSLDKSSKFSKNTAVWCVAFCADFT--IITGDSGGFVRFWDGKTGV-----------QWSDVKTH 243 (708)
Q Consensus 184 ----~~---~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--l~~~~~dg~i~~wd~~~~~-----------~~~~~~~~ 243 (708)
.+ ...+..+..+. ....+.++|||+ ++++..+.++.++|++.-. .+..-...
T Consensus 256 VVD~~~~~~~~v~~yIPVpK--------sPHGV~vSPDGKyi~VaGKLs~tVSViD~~Ki~~~~~~~~~~~~~~~~e~el 327 (459)
T d1fwxa2 256 VVDGRKEASSLFTRYIPIAN--------NPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPEL 327 (459)
T ss_dssp EEECSGG--CSSEEEEEEES--------SCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCC-GGGGEEECCBC
T ss_pred eecccccCCcceeEEEecCC--------CCCceEECCCCCEEEEeCCcCCcEEEEEehhhhhhhcccCCccccEEeeccc
Confidence 21 12233333332 234788999996 5566678999999986321 11111122
Q ss_pred ccCeEEEEEeCCCCEEEEEecCCeEEEEEccC
Q psy12614 244 KKDILALTVSEDENYLYCAGVDPTVVCFQRTR 275 (708)
Q Consensus 244 ~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~ 275 (708)
.-.-..-+|+.+|+-..+---|..|.-|++..
T Consensus 328 glgPLht~fd~~g~aytslfids~v~kw~~~~ 359 (459)
T d1fwxa2 328 GLGPLHTAFDGRGNAYTSLFLDSQVVKWNIED 359 (459)
T ss_dssp CSCEEEEEECTTSEEEEEETTTTEEEEEEHHH
T ss_pred CcCccccccCCCceEEEEeeccceEEEEecch
Confidence 33446678888885444555799999999865
|
| >d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: YWTD domain family: YWTD domain domain: Low density lipoprotein (LDL) receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.12 E-value=0.079 Score=46.94 Aligned_cols=220 Identities=8% Similarity=0.018 Sum_probs=134.3
Q ss_pred EEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEE-cCCCcEEEEECCCCe----EeEEEeecCC
Q psy12614 40 RLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSG-GLQGFVNEYDMRRLN----IKSSTAVTSG 112 (708)
Q Consensus 40 ~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~-~~d~~i~vwd~~~~~----~~~~~~~~~~ 112 (708)
+|..+.. ..|+-.++.+..... .+. .. ..+.+|+|. .+.|+-+ ...+.|.--++.... ....+.....
T Consensus 3 fLl~s~~-~~I~~~~l~~~~~~~-~~~-~~--~~~~~id~d~~~~~lYw~D~~~~~I~~~~l~~~~~~~~~~~~~~~~~~ 77 (266)
T d1ijqa1 3 YLFFTNR-HEVRKMTLDRSEYTS-LIP-NL--RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQ 77 (266)
T ss_dssp EEEEECB-SSEEEEETTSCCCEE-EEC-SC--SSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCS
T ss_pred EEEEECC-CeEEEEECCCCccee-eeC-CC--CceEEEEEEeCCCEEEEEECCCCEEEEEEecCCCCCcceEEEEeCCCC
Confidence 4555443 368889998766543 333 44 577899998 6666655 456677777765422 1122223335
Q ss_pred ceEEEEEecCCCEEEEEe-CCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecC--C-eEEEEEcCCCce
Q psy12614 113 TCWCLSVHKKKRLLAAGT-EQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCA--A-AVRVWDIHKGHA 188 (708)
Q Consensus 113 ~v~~~~~s~~~~~la~~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~--d-~i~iwd~~~~~~ 188 (708)
.+..+++.+.+..|..+. ..+.|.+.++...... ............+++.|...+|..... . .|...++. |..
T Consensus 78 ~p~glAvD~~~~~lY~~d~~~~~I~v~~~~g~~~~--~~~~~~~~~P~~l~vd~~~g~ly~~~~~~~~~I~r~~~d-Gs~ 154 (266)
T d1ijqa1 78 APDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRK--TLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN-GVD 154 (266)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEE--EEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETT-SCC
T ss_pred CcceEEEeeccceEEEEecCCCEEEeEecCCceEE--EEEcCCCCCcceEEEEcccCeEEEeccCCCcceeEeccC-CCc
Confidence 677899998777666654 4678999999877654 334444566789999987666665443 3 56666664 443
Q ss_pred EEEEEecccCCCCCceeEEEEEEccCC-EEEEE-cCCCcEEEEeCCCCeeEEEeec--cccCeEEEEEeCCCCEEEEEe-
Q psy12614 189 IHKMSLDKSSKFSKNTAVWCVAFCADF-TIITG-DSGGFVRFWDGKTGVQWSDVKT--HKKDILALTVSEDENYLYCAG- 263 (708)
Q Consensus 189 ~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~~~-~~dg~i~~wd~~~~~~~~~~~~--~~~~i~~~~~s~~~~~l~~~~- 263 (708)
...+.... -.....+++.+.+ ++..+ ...+.|...++........... ......++++. +.+|+.+.
T Consensus 155 ~~~l~~~~------~~~p~gl~iD~~~~~lYw~d~~~~~I~~~~~dG~~~~~~~~~~~~~~~p~~lav~--~~~ly~td~ 226 (266)
T d1ijqa1 155 IYSLVTEN------IQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF--EDKVFWTDI 226 (266)
T ss_dssp EEEEECSS------CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE--TTEEEEEET
T ss_pred eecccccc------cceeeEEEeeccccEEEEecCCcCEEEEEECCCCCEEEEEeCCCcccccEEEEEE--CCEEEEEEC
Confidence 44443221 3556889998865 55544 5578899999865433322222 22345677776 34555554
Q ss_pred cCCeEEEEEccC
Q psy12614 264 VDPTVVCFQRTR 275 (708)
Q Consensus 264 ~dg~i~iw~~~~ 275 (708)
.++.|...+..+
T Consensus 227 ~~~~I~~~~~~~ 238 (266)
T d1ijqa1 227 INEAIFSANRLT 238 (266)
T ss_dssp TTTEEEEEETTT
T ss_pred CCCeEEEEECCC
Confidence 567887777766
|
| >d1flga_ b.70.1.1 (A:) Ethanol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Ethanol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=97.03 E-value=0.2 Score=50.12 Aligned_cols=303 Identities=15% Similarity=0.157 Sum_probs=169.1
Q ss_pred CCEEEEEeCCCcEEEEeCCCCCeEEEEEecC------CCCCc-EEEEEEeCCEEEEEcCCCcEEEEECCCCeEeEEEee-
Q psy12614 38 SSRLAVSRADQSIEIWDISETPHVDRVFIGD------PLSNS-IECLTWFNDRLFSGGLQGFVNEYDMRRLNIKSSTAV- 109 (708)
Q Consensus 38 ~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h------~~~~~-v~~l~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~- 109 (708)
+..|.+++.++.|.-.|..+|+.+= .+... ..... -..+++.++.++.++.++.+.-.|.++|+.+.....
T Consensus 68 ~g~vy~~t~~~~v~AlDa~TG~~lW-~~~~~~~~~~~~~~~~~~rg~a~~~~~i~~~t~~~~l~alda~tG~~~W~~~~~ 146 (582)
T d1flga_ 68 DGVIYVTASYSRLFALDAKTGKRLW-TYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGTLDASVVALNKNTGKVVWKKKFA 146 (582)
T ss_dssp TTEEEEEETTTEEEEEESSSCCEEE-EEECCCCTTCCCSSCSCCCCCEEETTEEEEEETTTEEEEEESSSCCEEEEEECS
T ss_pred CCEEEEeCCCCeEEEEeCCCCCeEE-EEcCCCCCccccccccccCCceEeCCceEEecCCCeEEEecccccceeeeeccc
Confidence 3467777888999999999998864 22211 00011 123555578889999999999999999988765431
Q ss_pred -cC-C-ceE-E-EEEec--CCCEEEEEe-------CCCcEEEEEccCCcEEEEEecccc---------------------
Q psy12614 110 -TS-G-TCW-C-LSVHK--KKRLLAAGT-------EQGHINLFQISDEGLLYEKLLDRQ--------------------- 154 (708)
Q Consensus 110 -~~-~-~v~-~-~~~s~--~~~~la~~~-------~d~~i~iwd~~~~~~~~~~~~~~~--------------------- 154 (708)
+. . ... + ..+.+ .+..++..+ ..+.|.-+|..+|+.+........
T Consensus 147 ~~~~~~~~~~~p~~~~~~~~~~~~~i~g~~~~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~d~~~~g~~~~~~~ 226 (582)
T d1flga_ 147 DHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRPFVEGHMGRLNGKDSTVTGDVKAPSW 226 (582)
T ss_dssp CGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEEESSTTCEEEETTEEEEESSCTTCTTS
T ss_pred CCCccceeecCceEecCCcEeEEEEEeCccccccccccceEEecCCCCcEEEEEeccCCccccccccccccccccccccC
Confidence 11 0 000 0 11111 123333321 246688889999988754332210
Q ss_pred -----------------cccE-EEEEECCCCCEEEEec------------------------CC-eEEEEEcCCCceEEE
Q psy12614 155 -----------------QGRI-LCTAWHSSGDYLVTGC------------------------AA-AVRVWDIHKGHAIHK 191 (708)
Q Consensus 155 -----------------~~~v-~~~~~s~d~~~l~~~~------------------------~d-~i~iwd~~~~~~~~~ 191 (708)
.+.+ ..+++.+...+++.+. .. .+.-.|+.+|+....
T Consensus 227 ~~~~~~~~~~~~~~~~~gg~vW~~~s~D~~~~~vy~~tgn~~p~~~~~~~~~g~~~~~~dn~ys~SvvAld~~tG~~~W~ 306 (582)
T d1flga_ 227 PDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVKWF 306 (582)
T ss_dssp CBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCEEEE
T ss_pred CCccccccCCccceecCCCcccccceeccccceEEeccCCcccccccccccCCCCcCcccccccceeEEecccchhhhhc
Confidence 0111 2355666666665432 12 577889999998888
Q ss_pred EEecccCC--CCC--ceeEEEEEEccCC---EEEEEcCCCcEEEEeCCCCeeEEEeeccc--------------------
Q psy12614 192 MSLDKSSK--FSK--NTAVWCVAFCADF---TIITGDSGGFVRFWDGKTGVQWSDVKTHK-------------------- 244 (708)
Q Consensus 192 ~~~~~~~~--~~~--~~~v~~~~~~~~~---~l~~~~~dg~i~~wd~~~~~~~~~~~~~~-------------------- 244 (708)
++..+... +.. ...+..+...+.. .++..+.++.++++|.++|+.+.......
T Consensus 307 ~q~~~~D~wd~d~~~~p~l~d~~~~~g~~~~~v~~~~k~g~~~vldr~tG~~i~~~~~~~~~~~~~~~d~~~~~~~~~~~ 386 (582)
T d1flga_ 307 YQHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNITWASHIDLKTGRPVEREG 386 (582)
T ss_dssp EESSTTCCSCCCCCCCCEEEEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCCSEEEECTTTCCEEECTT
T ss_pred ccccccccccccccccccccccccccccccceeEeecccccEEeecccCCcccccccccCccccccccccccccceeccc
Confidence 77643110 000 1112222222222 16678889999999999988764321110
Q ss_pred -------------------------cCeEEEEEeCCCCEEEEEecC---------------------------------C
Q psy12614 245 -------------------------KDILALTVSEDENYLYCAGVD---------------------------------P 266 (708)
Q Consensus 245 -------------------------~~i~~~~~s~~~~~l~~~~~d---------------------------------g 266 (708)
..-...+++|+...++....+ |
T Consensus 387 ~~~~~~~~~~~~~~~~~~~P~~~gg~~w~~~a~dp~~g~~yvp~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~G 466 (582)
T d1flga_ 387 QRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVG 466 (582)
T ss_dssp CSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEESCSSCSE
T ss_pred cccccccccccccceEEECCCccCCcccccceecCCCCceeeeccccccccccccccccccccccccCccccccccCCCC
Confidence 011123556665555544333 3
Q ss_pred eEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceE--EEEEeCCEEEEEcCCCeEEEEeCCCCc-eeecCc-cCC
Q psy12614 267 TVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVK--SLALHGNRLYSGGLDSYLSLSYYPPKT-LVKYPC-TLA 342 (708)
Q Consensus 267 ~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~--~l~~~~~~l~s~~~d~~i~iw~~~~~~-~~~~~~-~~~ 342 (708)
.|.-+|+.+ |+ ..|... .+ .++. .++..+.+++.++.|+.++.+|.++++ +-++.- ...
T Consensus 467 ~l~AiD~~T--------G~----i~W~~~----~~-~p~~~g~lstagglVF~Gt~dg~l~A~Da~TGe~LW~~~~~~~~ 529 (582)
T d1flga_ 467 SLRAMDPVS--------GK----VVWEHK----EH-LPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGI 529 (582)
T ss_dssp EEEEECTTT--------CC----EEEEEE----ES-SCCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCC
T ss_pred eEEEEcCCC--------Cc----EEeecC----CC-CCCccceeEEcCCeEEEeCCCCeEEEEECCCCcEeEEEECCCCc
Confidence 455555555 43 333321 11 1111 123337888899999999999999988 333331 233
Q ss_pred CCceEEEEcCCc-EEEE
Q psy12614 343 QSTPVSLAKDIQ-HVLL 358 (708)
Q Consensus 343 ~~~~~~~s~~~~-~l~~ 358 (708)
....+.+..+|+ +++.
T Consensus 530 ~~~P~ty~~~G~qYv~i 546 (582)
T d1flga_ 530 VSPPITWEQDGEQYLGV 546 (582)
T ss_dssp CSCCEEEEETTEEEEEE
T ss_pred cccCEEEEECCEEEEEE
Confidence 445688888885 4544
|
| >d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Quinoprotein alcohol dehydrogenase, N-terminal domain species: Pseudomonas putida, hk5 [TaxId: 303]
Probab=96.82 E-value=0.29 Score=48.63 Aligned_cols=237 Identities=16% Similarity=0.177 Sum_probs=139.1
Q ss_pred CCEEEEEeCCCcEEEEeCCCCCeEEEEEec-CCCCCcEEEE-EEeCCEEEEEcC------CCcEEEEECCCCeEeEEEee
Q psy12614 38 SSRLAVSRADQSIEIWDISETPHVDRVFIG-DPLSNSIECL-TWFNDRLFSGGL------QGFVNEYDMRRLNIKSSTAV 109 (708)
Q Consensus 38 ~~~la~~~~dg~v~iwd~~~~~~~~~~~~~-h~~~~~v~~l-~~~~~~l~s~~~------d~~i~vwd~~~~~~~~~~~~ 109 (708)
+..++.+..++.|.-.|..+|+.+-..-.. +.....++.. ...++.++.+.. .|.|.-+|.++|+.+..+..
T Consensus 117 ~~~v~~~~~~g~l~Alda~tG~~~w~~~~~~~~~~~~~~~~p~v~~~~vivg~~~~~~~~~G~v~a~D~~TG~~~W~~~t 196 (560)
T d1kv9a2 117 GDKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYT 196 (560)
T ss_dssp BTEEEEECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEES
T ss_pred CCeEEEEeCCCEEEEEECCCCcEEeccCccCcccceeeeeeeeeecCcccccccceeccccceEEEEECCCceEEeeeee
Confidence 346778888999999999999887633221 1100111111 112556665543 36799999999999887752
Q ss_pred c------------------------------CCceE-EEEEecCCCEEEEEeC-------------------CCcEEEEE
Q psy12614 110 T------------------------------SGTCW-CLSVHKKKRLLAAGTE-------------------QGHINLFQ 139 (708)
Q Consensus 110 ~------------------------------~~~v~-~~~~s~~~~~la~~~~-------------------d~~i~iwd 139 (708)
- .+.++ .+++.+...++..+.. ...|.-.|
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~s~D~~~~l~y~~tgn~~~~~~~~~~~~~g~n~~s~sivAld 276 (560)
T d1kv9a2 197 VPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIR 276 (560)
T ss_dssp SCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEEC
T ss_pred ccccccCCccccccccccccccccccccccCCCCcccccccccccCeeeecCCCCcccccccccccCCccccceeeEEec
Confidence 1 11222 3667777776665431 24577788
Q ss_pred ccCCcEEEEEeccccccc-------EEEEEECCCC---CEEEEecCC-eEEEEEcCCCceEEEEEecccC----------
Q psy12614 140 ISDEGLLYEKLLDRQQGR-------ILCTAWHSSG---DYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSS---------- 198 (708)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~-------v~~~~~s~d~---~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~---------- 198 (708)
+++++.........|... ..-+....++ +.++.++.+ .+.++|..+|+.+.........
T Consensus 277 ~~tG~~~W~~Q~~~~D~wd~d~~~~~~l~~~~~~g~~~~~v~~~~k~G~~~~lDr~tG~~i~~~~~~~~~~~~~~d~~~~ 356 (560)
T d1kv9a2 277 PDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATG 356 (560)
T ss_dssp TTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTC
T ss_pred CCccceeEEEeccccccccccccceeeeeeeecCCceeeeeeecCccceEEEEecCCCcccccccccccccccccChhhc
Confidence 999998765554444321 1111222234 355667777 8999999999988766543200
Q ss_pred --------CCCCceeE-----------EEEEEccCCE-EEEEc------------------------------------C
Q psy12614 199 --------KFSKNTAV-----------WCVAFCADFT-IITGD------------------------------------S 222 (708)
Q Consensus 199 --------~~~~~~~v-----------~~~~~~~~~~-l~~~~------------------------------------~ 222 (708)
.+.....+ ...++.|+.. ++.-. .
T Consensus 357 ~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yvp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 436 (560)
T d1kv9a2 357 RPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVV 436 (560)
T ss_dssp CEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGC
T ss_pred cccccccccccccceeeeeccccccccccccccCCCCeeecccccccceeeccccccccccccccccCcccccCCCCccc
Confidence 00000000 1234555442 21111 1
Q ss_pred CCcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccC
Q psy12614 223 GGFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTR 275 (708)
Q Consensus 223 dg~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~ 275 (708)
.|.|.-||+.+|+.+-..... ....+-.++-.+.+++.|+.||.++-+|..+
T Consensus 437 ~G~l~A~D~~tGk~~W~~~~~-~~~~gg~l~TagglVF~G~~dg~l~A~Da~t 488 (560)
T d1kv9a2 437 SGALLAWDPVKQKAAWKVPYP-THWNGGTLSTAGNLVFQGTAAGQMHAYSADK 488 (560)
T ss_dssp EEEEEEEETTTTEEEEEEEES-SSCCCCEEEETTTEEEEECTTSEEEEEETTT
T ss_pred ccceEEEeCCCCeEeeeccCC-CCCCCceeEECCCEEEEECCCCcEEEEECCC
Confidence 256888999999988776532 2222223344566889999999999999999
|
| >d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Quinoprotein alcohol dehydrogenase, N-terminal domain species: Comamonas testosteroni [TaxId: 285]
Probab=96.63 E-value=0.41 Score=47.74 Aligned_cols=113 Identities=11% Similarity=0.055 Sum_probs=72.2
Q ss_pred CCEEEEEcCCCcEEEEECCCCeEeEEEeecCC----------ce-EEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEE
Q psy12614 81 NDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSG----------TC-WCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEK 149 (708)
Q Consensus 81 ~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~----------~v-~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~ 149 (708)
+..|+.++.++.|.-+|.++|+.+.++..... .+ ..+++. +..++.++.|+.+.-.|..+|+.+...
T Consensus 77 ~g~vyv~t~~~~v~AlDa~TG~~~W~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~v~~~t~~g~l~alda~tG~~~W~~ 154 (573)
T d1kb0a2 77 DGIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALW--KGKVYVGAWDGRLIALDAATGKEVWHQ 154 (573)
T ss_dssp TTEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEE--TTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCEEEEECCCCeEEEEeCCCCCeEEEeCCCCCcccccccccccccccceEE--CCcEEEEecccceeeeccccccceecc
Confidence 67888889999999999999999988753211 11 123333 235677788999999999999987655
Q ss_pred ecccccccEEEEEECC--CCCEEEEecC------C-eEEEEEcCCCceEEEEEec
Q psy12614 150 LLDRQQGRILCTAWHS--SGDYLVTGCA------A-AVRVWDIHKGHAIHKMSLD 195 (708)
Q Consensus 150 ~~~~~~~~v~~~~~s~--d~~~l~~~~~------d-~i~iwd~~~~~~~~~~~~~ 195 (708)
....+...-..+.-.| -+..+++++. . .|..+|.++|+.+.++...
T Consensus 155 ~~~~~~~~~~~~~~~p~v~~~~vivg~~~~~~~~~G~v~a~D~~TG~~~W~~~t~ 209 (573)
T d1kb0a2 155 NTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSV 209 (573)
T ss_dssp ETTTTCCSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESS
T ss_pred cCccCCcceEEeecceEEEeccEEEeeccccccccceEEEEecCCccceeeeeec
Confidence 4432221100111111 1234444432 2 5999999999999887653
|
| >d1qfma1 b.69.7.1 (A:1-430) Prolyl oligopeptidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Peptidase/esterase 'gauge' domain family: Prolyl oligopeptidase, N-terminal domain domain: Prolyl oligopeptidase, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=96.54 E-value=0.37 Score=46.10 Aligned_cols=240 Identities=8% Similarity=0.051 Sum_probs=127.5
Q ss_pred CCCCcEEEEEEcCCCCEEEEEe-C----CCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe--CCEEEEEcC-------
Q psy12614 24 PEPKVINCIACEPKSSRLAVSR-A----DQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF--NDRLFSGGL------- 89 (708)
Q Consensus 24 ~h~~~v~~~~~s~~~~~la~~~-~----dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~--~~~l~s~~~------- 89 (708)
++.-.+..+++|||++++|.+- . ...|++.|+.+++.+...+..-. ...++|. ++.|+-...
T Consensus 122 ~~~~~~~~~~~Spd~~~la~s~d~~G~e~~~l~v~Dl~tg~~~~~~i~~~~----~~~~~W~~D~~~~~Y~~~~~~~~~~ 197 (430)
T d1qfma1 122 DGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERVK----FSCMAWTHDGKGMFYNAYPQQDGKS 197 (430)
T ss_dssp SSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEEEC----SCCEEECTTSSEEEEEECCCCSSCC
T ss_pred cccceecceEecCCCCEEEEEeccccCchheeEEeccCcceeccccccccc----ccceEEcCCCCEEEEEEeccccCcc
Confidence 3443456778999999999652 2 34599999999998765554322 2467888 555553322
Q ss_pred ---------CCcEEEEECCCCeE--eEEEeec--CCceEEEEEecCCCEEEEEeC---CCc--EEEEEccCCcE------
Q psy12614 90 ---------QGFVNEYDMRRLNI--KSSTAVT--SGTCWCLSVHKKKRLLAAGTE---QGH--INLFQISDEGL------ 145 (708)
Q Consensus 90 ---------d~~i~vwd~~~~~~--~~~~~~~--~~~v~~~~~s~~~~~la~~~~---d~~--i~iwd~~~~~~------ 145 (708)
...|..|.+.+... ...+... ...+..+..++++++++.... +.. +.+.|......
T Consensus 198 ~~~~~~~~~~~~v~~h~lgt~~~~d~~v~~e~d~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 277 (430)
T d1qfma1 198 DGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGIL 277 (430)
T ss_dssp SSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSC
T ss_pred cccccccCCcceEEEEECCCCccccccccccccCCceEEeeeccCCcceeeEEeeccCCccEEEEEeeCCCccccccccc
Confidence 23577888777542 2333332 234667788999998765332 233 44445443211
Q ss_pred EEEEecccccccEEEEEECCCCCEEEEec---CC-eEEEEEcCCCce--EEEEEecccCCCCCceeEE--EEEEccCCEE
Q psy12614 146 LYEKLLDRQQGRILCTAWHSSGDYLVTGC---AA-AVRVWDIHKGHA--IHKMSLDKSSKFSKNTAVW--CVAFCADFTI 217 (708)
Q Consensus 146 ~~~~~~~~~~~~v~~~~~s~d~~~l~~~~---~d-~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~v~--~~~~~~~~~l 217 (708)
...............+.. .++.+++... .+ .|...++.+... ...+...+ ...+. .+.+. ++.+
T Consensus 278 ~~~~~~~~~~~~~~~~~~-~~~~~~~~Tn~~a~~~~L~~~~~~~~~~~~w~~vi~~~------~~~~~~~~~~~~-~~~l 349 (430)
T d1qfma1 278 KWVKLIDNFEGEYDYVTN-EGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEH------EKDVLEWVACVR-SNFL 349 (430)
T ss_dssp CCEEEECSSSSCEEEEEE-ETTEEEEEECTTCTTCEEEEEETTBCCGGGCEEEECCC------SSCEEEEEEEET-TTEE
T ss_pred ceeEeecccccceEEEec-CCceeecccCcccccceeEEecCCCCccccceEEeccc------CcceeeeEEEEE-CCEE
Confidence 000122222223333222 2222333322 23 555566654322 12222211 22232 23333 3344
Q ss_pred E-EEcCC--CcEEEEeCCCCeeEEEeeccccCeEEEEEeCCCCEEEEEec----CCeEEEEEccC
Q psy12614 218 I-TGDSG--GFVRFWDGKTGVQWSDVKTHKKDILALTVSEDENYLYCAGV----DPTVVCFQRTR 275 (708)
Q Consensus 218 ~-~~~~d--g~i~~wd~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~----dg~i~iw~~~~ 275 (708)
+ ....+ ..|++++..++..........+.+..+...++...+...-. -.++..+|+.+
T Consensus 350 vl~~~~~~~~~l~v~~~~~~~~~~~~~~~~~sv~~~~~~~~~~~~~~~~ss~~tP~~~y~~Dl~t 414 (430)
T d1qfma1 350 VLCYLHDVKNTLQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTK 414 (430)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTS
T ss_pred EEEEEcCCEeEEEEEECCCCcEEEecCCCCceEeeccCCCCCCEEEEEEcCCCCCCeEEEEECCC
Confidence 4 33344 36889999888766555544556665655566655543322 26788888887
|
| >d1qfma1 b.69.7.1 (A:1-430) Prolyl oligopeptidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Peptidase/esterase 'gauge' domain family: Prolyl oligopeptidase, N-terminal domain domain: Prolyl oligopeptidase, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=96.46 E-value=0.41 Score=45.73 Aligned_cols=241 Identities=11% Similarity=0.086 Sum_probs=122.1
Q ss_pred cEEEEEECCCCCEEEE----ecCC--eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcC-------
Q psy12614 157 RILCTAWHSSGDYLVT----GCAA--AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDS------- 222 (708)
Q Consensus 157 ~v~~~~~s~d~~~l~~----~~~d--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~------- 222 (708)
.+...++|||+++++. +|.+ .+++.|+.+++.+..... ......++|.+|++ ++....
T Consensus 126 ~~~~~~~Spd~~~la~s~d~~G~e~~~l~v~Dl~tg~~~~~~i~--------~~~~~~~~W~~D~~~~~Y~~~~~~~~~~ 197 (430)
T d1qfma1 126 ALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLE--------RVKFSCMAWTHDGKGMFYNAYPQQDGKS 197 (430)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEE--------EECSCCEEECTTSSEEEEEECCCCSSCC
T ss_pred eecceEecCCCCEEEEEeccccCchheeEEeccCcceecccccc--------cccccceEEcCCCCEEEEEEeccccCcc
Confidence 3456678999999984 3444 899999999987653321 12225688999986 443221
Q ss_pred ---------CCcEEEEeCCCCee--EEEeec--cccCeEEEEEeCCCCEEEEEec---CCe--EEEEEccCCcccccCCC
Q psy12614 223 ---------GGFVRFWDGKTGVQ--WSDVKT--HKKDILALTVSEDENYLYCAGV---DPT--VVCFQRTRKPQVCSTSG 284 (708)
Q Consensus 223 ---------dg~i~~wd~~~~~~--~~~~~~--~~~~i~~~~~s~~~~~l~~~~~---dg~--i~iw~~~~~~~~~~~~g 284 (708)
...|..+.+.+... ...+.. ....+..+..++++++++.... +.. +.+.++........
T Consensus 198 ~~~~~~~~~~~~v~~h~lgt~~~~d~~v~~e~d~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~~~~~d~~~~~~~~~--- 274 (430)
T d1qfma1 198 DGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGIT--- 274 (430)
T ss_dssp SSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSC---
T ss_pred cccccccCCcceEEEEECCCCccccccccccccCCceEEeeeccCCcceeeEEeeccCCccEEEEEeeCCCcccccc---
Confidence 12577787766532 223332 2335667788999999875432 233 44445443100000
Q ss_pred CCCCCcceEEeEEEeccccceEEEEEeCCEEEEEc----CCCeEEEEeCCCCce---eecCccCCC-CceEEEEcCCcEE
Q psy12614 285 PEQGSSVWVRSVNRVIHEGDVKSLALHGNRLYSGG----LDSYLSLSYYPPKTL---VKYPCTLAQ-STPVSLAKDIQHV 356 (708)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~s~~----~d~~i~iw~~~~~~~---~~~~~~~~~-~~~~~~s~~~~~l 356 (708)
....|. ...........-+...+..+..-+ .++.|...++..... ..+..+... ...-.++..+.++
T Consensus 275 ---~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~Tn~~a~~~~L~~~~~~~~~~~~w~~vi~~~~~~~~~~~~~~~~~~l 349 (430)
T d1qfma1 275 ---GILKWV--KLIDNFEGEYDYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFL 349 (430)
T ss_dssp ---SSCCCE--EEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEETTBCCGGGCEEEECCCSSCEEEEEEEETTTEE
T ss_pred ---ccccee--EeecccccceEEEecCCceeecccCcccccceeEEecCCCCccccceEEecccCcceeeeEEEEECCEE
Confidence 001121 112222233333333444443322 245666666655432 222211111 2222344444444
Q ss_pred E-EE-cCC--eEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCCCceEEEEeCCCCcEEEE--Ec---CCceE
Q psy12614 357 L-LQ-YTS--HLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNNATIRCSVVSNDGKYVAY--ST---ESCVR 427 (708)
Q Consensus 357 ~-~~-~~~--~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~g~~l~~--~~---d~~i~ 427 (708)
+ .. .++ .|.+++..++. ...+.....+.+..+...++...+.. ++ -.++.
T Consensus 350 vl~~~~~~~~~l~v~~~~~~~---------------------~~~~~~~~~~sv~~~~~~~~~~~~~~~~ss~~tP~~~y 408 (430)
T d1qfma1 350 VLCYLHDVKNTLQLHDLATGA---------------------LLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIY 408 (430)
T ss_dssp EEEEEETTEEEEEEEETTTCC---------------------EEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEE
T ss_pred EEEEEcCCEeEEEEEECCCCc---------------------EEEecCCCCceEeeccCCCCCCEEEEEEcCCCCCCeEE
Confidence 4 33 443 57888877654 22333334455555555555544443 32 45666
Q ss_pred EEEEEec
Q psy12614 428 LHSLDLD 434 (708)
Q Consensus 428 i~~~~~~ 434 (708)
-+|+.++
T Consensus 409 ~~Dl~t~ 415 (430)
T d1qfma1 409 HCDLTKE 415 (430)
T ss_dssp EEETTSS
T ss_pred EEECCCC
Confidence 6666653
|
| >d1flga_ b.70.1.1 (A:) Ethanol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Ethanol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=96.44 E-value=0.54 Score=46.89 Aligned_cols=113 Identities=8% Similarity=0.006 Sum_probs=72.0
Q ss_pred eCCEEEEEcCCCcEEEEECCCCeEeEEEeecC--------Cce-EEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEe
Q psy12614 80 FNDRLFSGGLQGFVNEYDMRRLNIKSSTAVTS--------GTC-WCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKL 150 (708)
Q Consensus 80 ~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~--------~~v-~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~ 150 (708)
.+..|++++.++.|.-.|.++|+.+.++.... ..+ ..+++. +..++.++.++.+.-.|..+|+.+....
T Consensus 67 ~~g~vy~~t~~~~v~AlDa~TG~~lW~~~~~~~~~~~~~~~~~~rg~a~~--~~~i~~~t~~~~l~alda~tG~~~W~~~ 144 (582)
T d1flga_ 67 SDGVIYVTASYSRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIY--GDKVFFGTLDASVVALNKNTGKVVWKKK 144 (582)
T ss_dssp ETTEEEEEETTTEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEE--TTEEEEEETTTEEEEEESSSCCEEEEEE
T ss_pred ECCEEEEeCCCCeEEEEeCCCCCeEEEEcCCCCCccccccccccCCceEe--CCceEEecCCCeEEEecccccceeeeec
Confidence 37788889999999999999999998875321 001 123332 3467788999999999999999886555
Q ss_pred ccccccc------EEEEEECCCCCEEEEec-------CC-eEEEEEcCCCceEEEEEe
Q psy12614 151 LDRQQGR------ILCTAWHSSGDYLVTGC-------AA-AVRVWDIHKGHAIHKMSL 194 (708)
Q Consensus 151 ~~~~~~~------v~~~~~s~d~~~l~~~~-------~d-~i~iwd~~~~~~~~~~~~ 194 (708)
+..+... -....--..+..++..+ .. .|.-+|.++|+.+.++..
T Consensus 145 ~~~~~~~~~~~~~p~~~~~~~~~~~~~i~g~~~~~~~~~g~v~a~d~~tG~~~W~~~~ 202 (582)
T d1flga_ 145 FADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRPF 202 (582)
T ss_dssp CSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEEES
T ss_pred ccCCCccceeecCceEecCCcEeEEEEEeCccccccccccceEEecCCCCcEEEEEec
Confidence 5433210 00111011133333321 22 588999999999887754
|
| >d1v04a_ b.68.6.2 (A:) Serum paraoxonase/arylesterase 1, PON1 {Rabit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: Serum paraoxonase/arylesterase 1, PON1 domain: Serum paraoxonase/arylesterase 1, PON1 species: Rabit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=95.87 E-value=0.64 Score=42.46 Aligned_cols=200 Identities=13% Similarity=0.088 Sum_probs=114.1
Q ss_pred ceeeeeeeeccCCCCcEEEEEEcCCCCEEEEEeC------------CCcEEEEeCCCCCeEEEE--EecCCC---CCcEE
Q psy12614 13 TYGVHNIKFYAPEPKVINCIACEPKSSRLAVSRA------------DQSIEIWDISETPHVDRV--FIGDPL---SNSIE 75 (708)
Q Consensus 13 ~~~~~~~~~~~~h~~~v~~~~~s~~~~~la~~~~------------dg~v~iwd~~~~~~~~~~--~~~h~~---~~~v~ 75 (708)
......|+.+.+-...--.++..|+|..+++++. .|.|.++|+.+....... +.+... .-...
T Consensus 21 ~~~~~~C~~i~g~~~G~EDi~~~~dg~~~issg~~~~~~~~~~~~~~G~i~~~dl~~~~~~~~~l~~~~~~~~~~~f~Ph 100 (340)
T d1v04a_ 21 PVELPNCNLVKGIDNGSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPH 100 (340)
T ss_dssp CBCCSSCEECTTCCSCCCEEEECTTSEEEEEECCCC--------CCCCEEEEEETTSSSCCEEECEEECSSSCGGGCCEE
T ss_pred ccCCCCceEcCCCCCCcceEEECCCCcEEEEecCccCCCCCCCCCCCCeEEEEecCCCCCcceEEEecCCCCCCcceecc
Confidence 3445567777664444446888999987766532 488999999875432222 222210 02345
Q ss_pred EEEEe----CC-EEEEE---cCCCcEEEEECCCCe--Ee--EEEe-ecCCceEEEEEecCCCEEEEEeC-----------
Q psy12614 76 CLTWF----ND-RLFSG---GLQGFVNEYDMRRLN--IK--SSTA-VTSGTCWCLSVHKKKRLLAAGTE----------- 131 (708)
Q Consensus 76 ~l~~~----~~-~l~s~---~~d~~i~vwd~~~~~--~~--~~~~-~~~~~v~~~~~s~~~~~la~~~~----------- 131 (708)
.+..- +. +|++. ....+|.+|++.... .. .++. ......+.+++..++.++++-..
T Consensus 101 Gi~l~~~~dg~~~L~vvnH~~~~~~ieif~~~~~~~~l~~~~~v~~~~~~~pNDv~~~~~g~fy~Tnd~~~~~~~~~~~e 180 (340)
T d1v04a_ 101 GISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWE 180 (340)
T ss_dssp EEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCCSHHHHHHH
T ss_pred ceeEEEcCCCcEEEEEEeccCCCceeEEEEEeCCCCeEEEEeecCCccccCccceEEecCCCEEEecCccCcChhhhhhh
Confidence 56553 33 45555 345678888875432 21 1222 11245788999999988887311
Q ss_pred ----CCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC--eEEEEEcCCCceEEEEEecccCCCCCcee
Q psy12614 132 ----QGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA--AVRVWDIHKGHAIHKMSLDKSSKFSKNTA 205 (708)
Q Consensus 132 ----d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 205 (708)
-+...+|....++.. .....-...+.++++||+++|+.+... .|++|++.....+...... .-...
T Consensus 181 ~~~~~~~g~v~~~~~~~~~---~~~~~l~~pNGI~~s~d~~~lyVa~t~~~~i~~y~~~~~~~l~~~~~~-----~l~~~ 252 (340)
T d1v04a_ 181 MHLGLAWSFVTYYSPNDVR---VVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVL-----SFDTL 252 (340)
T ss_dssp HHTTCCCEEEEEECSSCEE---EEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEE-----ECSSE
T ss_pred HhhcCCceeEEEEcCCceE---EEcCCCCccceeEECCCCCEEEEEeCCCCeEEEEEeCCCcccceEEEe-----cCCCC
Confidence 123455665555543 222223457899999999988776544 8999998754433322211 11344
Q ss_pred EEEEEEcc-CCEEEEE
Q psy12614 206 VWCVAFCA-DFTIITG 220 (708)
Q Consensus 206 v~~~~~~~-~~~l~~~ 220 (708)
.-.+.+.+ +|.+.++
T Consensus 253 pDNi~~d~~~g~lwva 268 (340)
T d1v04a_ 253 VDNISVDPVTGDLWVG 268 (340)
T ss_dssp EEEEEECTTTCCEEEE
T ss_pred CCccEEecCCCEEEEE
Confidence 55667664 4554444
|
| >d1xipa_ b.69.14.1 (A:) Nucleoporin NUP159 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nucleoporin domain family: Nucleoporin domain domain: Nucleoporin NUP159 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=95.35 E-value=1 Score=41.36 Aligned_cols=176 Identities=6% Similarity=-0.024 Sum_probs=107.3
Q ss_pred CCcEEEEEEcCCCCEEEEEeCCCcEEEEeCCC-----------CCeEEEEEecCCCCCcEEEEEEeCCEEEEEcCCCcEE
Q psy12614 26 PKVINCIACEPKSSRLAVSRADQSIEIWDISE-----------TPHVDRVFIGDPLSNSIECLTWFNDRLFSGGLQGFVN 94 (708)
Q Consensus 26 ~~~v~~~~~s~~~~~la~~~~dg~v~iwd~~~-----------~~~~~~~~~~h~~~~~v~~l~~~~~~l~s~~~d~~i~ 94 (708)
....+-+++++...++|+|+.++ ++|-.... ..... ... - ..|..++|+++.|+.. .++.+.
T Consensus 36 ~~~~~LLAVsn~~GLl~aa~~~~-l~V~~t~~l~~~~~~~~~~~~~~~-~~~--i--p~v~~vafs~d~l~v~-~~~~l~ 108 (381)
T d1xipa_ 36 FASLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKW-EKE--I--PDVIFVCFHGDQVLVS-TRNALY 108 (381)
T ss_dssp SSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSE-EEE--C--TTEEEEEEETTEEEEE-ESSEEE
T ss_pred ccccceEEEeCCCCEEEEECCCE-EEEEEHHHHHHHhhccCCCCccee-ccC--C--CCeEEEEeeCCEEEEE-eCCCEE
Confidence 45788899999888999988874 66765321 11111 122 1 3589999997766665 445678
Q ss_pred EEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEe---cccccccEEEEEECCCCCEEE
Q psy12614 95 EYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKL---LDRQQGRILCTAWHSSGDYLV 171 (708)
Q Consensus 95 vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~---~~~~~~~v~~~~~s~d~~~l~ 171 (708)
.++...-........-..++..+.++|. .++....++.+.++++.++....... -..-.+.+.+++|++.|+.++
T Consensus 109 ~~~~~~l~~~~~~~~~~~~~~~~~~~p~--~~~l~~~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~v~ws~kgkq~v 186 (381)
T d1xipa_ 109 SLDLEELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQLAQNVTSFDVTNSQLAVLLKDRSFQSF 186 (381)
T ss_dssp EEESSSTTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEEEEESEEEEEECSSEEEEEETTSCEEEE
T ss_pred EEEeeccccccccccccccccceecCCc--eeEEEecCCCEEEEEeccCccccccCCcceEEecCCceEEEEeCCcEEEE
Confidence 8887775555554445567888888775 56677788999999999886532110 001135577778887777777
Q ss_pred EecCCeEEEEEcCCCceEEEEEecc--cCCCCCceeEEEEEEccCCEEE
Q psy12614 172 TGCAAAVRVWDIHKGHAIHKMSLDK--SSKFSKNTAVWCVAFCADFTII 218 (708)
Q Consensus 172 ~~~~d~i~iwd~~~~~~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~l~ 218 (708)
++..+...+ ...+.... .........+.++.|..+..++
T Consensus 187 ~~~g~~~q~--------k~~i~~~~~~~~p~~~~~~v~sI~WL~~~~F~ 227 (381)
T d1xipa_ 187 AWRNGEMEK--------QFEFSLPSELEELPVEEYSPLSVTILSPQDFL 227 (381)
T ss_dssp EEETTEEEE--------EEEECCCHHHHTSCTTTSEEEEEEESSSSEEE
T ss_pred EeCCCceee--------ccCCCCccccCCCcCCCcceeEEEEecCceEE
Confidence 664432211 11111110 0000124568899998777644
|
| >d1v04a_ b.68.6.2 (A:) Serum paraoxonase/arylesterase 1, PON1 {Rabit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: Serum paraoxonase/arylesterase 1, PON1 domain: Serum paraoxonase/arylesterase 1, PON1 species: Rabit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=95.27 E-value=1 Score=40.94 Aligned_cols=188 Identities=7% Similarity=0.057 Sum_probs=104.1
Q ss_pred CCceEEEEcCCcEEEEEc-------------CCeEEEEEecCCCCCCCCCCCCCCcccCCCCceEEEEEEecCC----Cc
Q psy12614 343 QSTPVSLAKDIQHVLLQY-------------TSHLELWSLGSAQSTDLSSHSNTTGVPLLSFPRLIVKMSAVNN----AT 405 (708)
Q Consensus 343 ~~~~~~~s~~~~~l~~~~-------------~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~ 405 (708)
....+++.|+|..++++. .+.|.++|+.+.. ............. -.
T Consensus 36 G~EDi~~~~dg~~~issg~~~~~~~~~~~~~~G~i~~~dl~~~~-----------------~~~~~l~~~~~~~~~~~f~ 98 (340)
T d1v04a_ 36 GSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKE-----------------PAVSELEIIGNTLDISSFN 98 (340)
T ss_dssp CCCEEEECTTSEEEEEECCCC--------CCCCEEEEEETTSSS-----------------CCEEECEEECSSSCGGGCC
T ss_pred CcceEEECCCCcEEEEecCccCCCCCCCCCCCCeEEEEecCCCC-----------------CcceEEEecCCCCCCccee
Confidence 445677788887777653 3778888877644 1111222221110 12
Q ss_pred eEEEE--eCCCCcE-EEE-E---cCCceEEEEEEecCCcceeEEeecCCcccccceeEEEEEecCCCeEEEEecC-----
Q psy12614 406 IRCSV--VSNDGKY-VAY-S---TESCVRLHSLDLDGDKPQISRIKNLPAPLFKSIFTHVLISADSTLLLAVSLN----- 473 (708)
Q Consensus 406 i~~~~--~s~~g~~-l~~-~---~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~~~~~d----- 473 (708)
...+. -.++|+. |++ . ...+|.+|++......+...+ .+.... ......+++..++.++++-...
T Consensus 99 PhGi~l~~~~dg~~~L~vvnH~~~~~~ieif~~~~~~~~l~~~~--~v~~~~-~~~pNDv~~~~~g~fy~Tnd~~~~~~~ 175 (340)
T d1v04a_ 99 PHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLK--TIRHKL-LPSVNDIVAVGPEHFYATNDHYFIDPY 175 (340)
T ss_dssp EEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEE--EECCTT-CSSEEEEEEEETTEEEEEESCSCCSHH
T ss_pred ccceeEEEcCCCcEEEEEEeccCCCceeEEEEEeCCCCeEEEEe--ecCCcc-ccCccceEEecCCCEEEecCccCcChh
Confidence 23333 2556653 333 2 367899999987544333332 222221 3345668999999888874211
Q ss_pred ------------CcEEEecCCCeEEEEEecCCCCCccCcceEEEEECCCCcEEEEEe-cCCeEEEEECCc---eee-ecC
Q psy12614 474 ------------GPLYIIDLSSLEIKYCVDPYKSNLMSDVISLVQMSECKQYIVCAD-RKSHVVIWKNGQ---HHA-SLP 536 (708)
Q Consensus 474 ------------g~i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-~d~~i~iw~~~~---~~~-~~~ 536 (708)
+.+|.++.+..+.+.. . -...+.++++||+++|+++. ..+.|++|++.. ... ...
T Consensus 176 ~~~~e~~~~~~~g~v~~~~~~~~~~~~~--~------l~~pNGI~~s~d~~~lyVa~t~~~~i~~y~~~~~~~l~~~~~~ 247 (340)
T d1v04a_ 176 LKSWEMHLGLAWSFVTYYSPNDVRVVAE--G------FDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVL 247 (340)
T ss_dssp HHHHHHHTTCCCEEEEEECSSCEEEEEE--E------ESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEE
T ss_pred hhhhhHhhcCCceeEEEEcCCceEEEcC--C------CCccceeEECCCCCEEEEEeCCCCeEEEEEeCCCcccceEEEe
Confidence 1166777664433221 1 23678899999999887765 567899999872 111 111
Q ss_pred CCCCCceEEEEcCCCCEEEEEe
Q psy12614 537 RYRKPSTAMAIHPTLSTLVTVY 558 (708)
Q Consensus 537 ~~~~~v~~l~~s~d~~~l~~~~ 558 (708)
.-...+-.+.+.+++..+.+++
T Consensus 248 ~l~~~pDNi~~d~~~g~lwva~ 269 (340)
T d1v04a_ 248 SFDTLVDNISVDPVTGDLWVGC 269 (340)
T ss_dssp ECSSEEEEEEECTTTCCEEEEE
T ss_pred cCCCCCCccEEecCCCEEEEEE
Confidence 1234456677765433344443
|
| >d1h6la_ b.68.3.1 (A:) Thermostable phytase (3-phytase) {Bacillus amyloliquefaciens [TaxId: 1390]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Thermostable phytase (3-phytase) family: Thermostable phytase (3-phytase) domain: Thermostable phytase (3-phytase) species: Bacillus amyloliquefaciens [TaxId: 1390]
Probab=95.16 E-value=1.1 Score=40.64 Aligned_cols=194 Identities=11% Similarity=0.118 Sum_probs=109.2
Q ss_pred cCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEEC------CCCCEEEEec-C---C-eEEEEEcCC-Cce
Q psy12614 121 KKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWH------SSGDYLVTGC-A---A-AVRVWDIHK-GHA 188 (708)
Q Consensus 121 ~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s------~d~~~l~~~~-~---d-~i~iwd~~~-~~~ 188 (708)
|+..+++...+.+-|++||++..++. .+. .+++..+..- ....-++.++ + . +|.+|.+.. ...
T Consensus 38 p~~SlI~gTdK~~Gl~vYdL~G~~l~---~~~--~Gr~NNVDvr~~~~l~~~~~di~vasnR~~~~~~l~~~~id~~~~~ 112 (353)
T d1h6la_ 38 PQNSKLITTNKKSGLAVYSLEGKMLH---SYH--TGKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT 112 (353)
T ss_dssp GGGCEEEEEETTSCCEEEETTCCEEE---ECC--SSCEEEEEEEEEEEETTEEEEEEEEEECCTTTCEEEEEEEETTTTE
T ss_pred cCccEEEEEcCcCCEEEEcCCCcEEE---ecc--cCCcCccccccccccCCcceEEEEEeCCcCcceeEEEEEecCcccc
Confidence 34566666667777999999754442 332 3455554432 2222344444 2 2 688887753 333
Q ss_pred EEEEEecccCCCCCceeEEEEEE--ccC-CE--EEEEcCCCcEEEEeCC---CC----eeEEEeeccccCeEEEEEeCCC
Q psy12614 189 IHKMSLDKSSKFSKNTAVWCVAF--CAD-FT--IITGDSGGFVRFWDGK---TG----VQWSDVKTHKKDILALTVSEDE 256 (708)
Q Consensus 189 ~~~~~~~~~~~~~~~~~v~~~~~--~~~-~~--l~~~~~dg~i~~wd~~---~~----~~~~~~~~~~~~i~~~~~s~~~ 256 (708)
+..+.............++.+|+ ++. |. +++...+|.+..|.+. .+ +.++.+. -...+..+.+.+..
T Consensus 113 l~~~~~~~~p~~~~~~~vYGlc~y~~~~~g~~~afv~~k~G~v~q~~l~~~~~g~v~~~lvr~f~-~~~q~EGCVvDde~ 191 (353)
T d1h6la_ 113 LQSITDPNRPIASAIDEVYGFSLYHSQKTGKYYAMVTGKEGEFEQYELNADKNGYISGKKVRAFK-MNSQTEGMAADDEY 191 (353)
T ss_dssp EEECSCSSSCEECSSSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSSEEEEEEEEEE-CSSCEEEEEEETTT
T ss_pred cccccccccccccccCcceEEEEEecCCCCeEEEEEEcCCceEEEEEEEcCCCCceeeEeeeccC-CCCccceEEEeCCC
Confidence 33332211000001223566666 554 43 5677788988888652 33 3444554 45678999999999
Q ss_pred CEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEe--ccccceEEEEEe------CCEEEEEcCCCeEEEEe
Q psy12614 257 NYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRV--IHEGDVKSLALH------GNRLYSGGLDSYLSLSY 328 (708)
Q Consensus 257 ~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~--~~~~~v~~l~~~------~~~l~s~~~d~~i~iw~ 328 (708)
..|+.+-++..++.++... .. ..... ...... .....+..|+.. |-+|++.-.+.+..+|+
T Consensus 192 ~~LyisEE~~Giw~~~a~~--------~~--~~~~~-~i~~~~g~~l~~D~EGlaiy~~~~~~GylivSsQG~n~f~vyd 260 (353)
T d1h6la_ 192 GSLYIAEEDEAIWKFSAEP--------DG--GSNGT-VIDRADGRHLTPDIEGLTIYYAADGKGYLLASSQGNSSYAIYE 260 (353)
T ss_dssp TEEEEEETTTEEEEEESST--------TS--CSCCE-EEEECSSSSCCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEE
T ss_pred CcEEEecCccceEEEEecc--------CC--Cccce-eeecccCccccCCccccEEEEcCCCCeEEEEEcCCCCeEEEEe
Confidence 9999999887777776653 11 00111 111111 235678888765 23444455577888888
Q ss_pred CCC
Q psy12614 329 YPP 331 (708)
Q Consensus 329 ~~~ 331 (708)
..+
T Consensus 261 r~~ 263 (353)
T d1h6la_ 261 RQG 263 (353)
T ss_dssp SST
T ss_pred cCC
Confidence 754
|
| >d1zgka1 b.68.11.1 (A:322-609) Kelch-like ECH-associated protein 1, KEAP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Kelch motif family: Kelch motif domain: Kelch-like ECH-associated protein 1, KEAP1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.81 E-value=1.7 Score=38.22 Aligned_cols=223 Identities=11% Similarity=0.045 Sum_probs=99.2
Q ss_pred CcEEEEECCCCeEeEE--EeecCCceEEEEEecCCCEEEEEeC---------CCcEEEEEccCCcEEEEEecccccccEE
Q psy12614 91 GFVNEYDMRRLNIKSS--TAVTSGTCWCLSVHKKKRLLAAGTE---------QGHINLFQISDEGLLYEKLLDRQQGRIL 159 (708)
Q Consensus 91 ~~i~vwd~~~~~~~~~--~~~~~~~v~~~~~s~~~~~la~~~~---------d~~i~iwd~~~~~~~~~~~~~~~~~~v~ 159 (708)
..+.+||+++++-... +...... .+++. -++..++.|+. -..+.+||..+........+......-.
T Consensus 19 ~~~~~yd~~t~~W~~~~~~p~~R~~-~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~w~~~~~~p~~r~~~~ 96 (288)
T d1zgka1 19 SYLEAYNPSNGTWLRLADLQVPRSG-LAGCV-VGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIG 96 (288)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBS-CEEEE-ETTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCE
T ss_pred ceEEEEECCCCeEEECCCCCCccce-eEEEE-ECCEEEEEeCcccCCCCccccchhhhcccccccccccccccceeccee
Confidence 3578899988753221 2111111 12222 24555565542 2457888888777652222211111111
Q ss_pred EEEECCCCCEEEEecCC------eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEEEEcCC-----CcEEE
Q psy12614 160 CTAWHSSGDYLVTGCAA------AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSG-----GFVRF 228 (708)
Q Consensus 160 ~~~~s~d~~~l~~~~~d------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d-----g~i~~ 228 (708)
++.+ +++.++.++.+ ....+|..+........... ...-.++....+..++.|+.+ ..+..
T Consensus 97 ~~~~--~~~i~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~r~~~~~~~~~~~~~~~GG~~~~~~~~~~~~ 168 (288)
T d1zgka1 97 VGVI--DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLT------RRIGVGVAVLNRLLYAVGGFDGTNRLNSAEC 168 (288)
T ss_dssp EEEE--TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSS------CCBSCEEEEETTEEEEECCBCSSCBCCCEEE
T ss_pred cccc--ceeeEEecceecccccceeeeeccccCcccccccccc------ccccceeeeeeecceEecCcccccccceEEE
Confidence 2222 45555554432 35567766654322211110 111112222223234444443 45788
Q ss_pred EeCCCCeeEEEeecc-ccCeEEEEEeCCCCEEEEEecC-----CeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccc
Q psy12614 229 WDGKTGVQWSDVKTH-KKDILALTVSEDENYLYCAGVD-----PTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHE 302 (708)
Q Consensus 229 wd~~~~~~~~~~~~~-~~~i~~~~~s~~~~~l~~~~~d-----g~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 302 (708)
||..+++....-... ...-.+.+. .+++.++.++.+ .....+|..+ . .|........-.
T Consensus 169 ~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~i~GG~~~~~~~~~~~~~~~~~--------~------~~~~~~~~p~~r 233 (288)
T d1zgka1 169 YYPERNEWRMITAMNTIRSGAGVCV-LHNCIYAAGGYDGQDQLNSVERYDVET--------E------TWTFVAPMKHRR 233 (288)
T ss_dssp EETTTTEEEECCCCSSCCBSCEEEE-ETTEEEEECCBCSSSBCCCEEEEETTT--------T------EEEECCCCSSCC
T ss_pred eeccccccccccccccccccccccc-eeeeEEEecCccccccccceeeeeecc--------e------eeecccCccCcc
Confidence 888766543221111 111112222 234455555544 2456666665 2 233222211111
Q ss_pred cceEEEEEeCCEEEEEcCCC-----eEEEEeCCCCceeecC
Q psy12614 303 GDVKSLALHGNRLYSGGLDS-----YLSLSYYPPKTLVKYP 338 (708)
Q Consensus 303 ~~v~~l~~~~~~l~s~~~d~-----~i~iw~~~~~~~~~~~ 338 (708)
.....+.+.+++++.|+.++ .+.+||+.+.....+.
T Consensus 234 ~~~~~~~~~~~l~v~GG~~~~~~~~~v~~yd~~~~~W~~~~ 274 (288)
T d1zgka1 234 SALGITVHQGRIYVLGGYDGHTFLDSVECYDPDTDTWSEVT 274 (288)
T ss_dssp BSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEE
T ss_pred cceEEEEECCEEEEEecCCCCeecceEEEEECCCCEEEECC
Confidence 11222223367777776554 4778888887754443
|
| >d1zgka1 b.68.11.1 (A:322-609) Kelch-like ECH-associated protein 1, KEAP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Kelch motif family: Kelch motif domain: Kelch-like ECH-associated protein 1, KEAP1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.29 E-value=1.4 Score=38.83 Aligned_cols=214 Identities=10% Similarity=0.026 Sum_probs=96.5
Q ss_pred cEEEEeCCCCCeEEE-EEecCCCCCcEEEEEEe-CCEEEEEcC---------CCcEEEEECCCCeEeEEEeecCCceEEE
Q psy12614 49 SIEIWDISETPHVDR-VFIGDPLSNSIECLTWF-NDRLFSGGL---------QGFVNEYDMRRLNIKSSTAVTSGTCWCL 117 (708)
Q Consensus 49 ~v~iwd~~~~~~~~~-~~~~h~~~~~v~~l~~~-~~~l~s~~~---------d~~i~vwd~~~~~~~~~~~~~~~~v~~~ 117 (708)
.|.+||+.+++-... .++... .. .+++.. +..++.|+. -..+.++|..+.+....-......-...
T Consensus 20 ~~~~yd~~t~~W~~~~~~p~~R--~~-~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~w~~~~~~p~~r~~~~ 96 (288)
T d1zgka1 20 YLEAYNPSNGTWLRLADLQVPR--SG-LAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIG 96 (288)
T ss_dssp CEEEEETTTTEEEECCCCSSCC--BS-CEEEEETTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCE
T ss_pred eEEEEECCCCeEEECCCCCCcc--ce-eEEEEECCEEEEEeCcccCCCCccccchhhhcccccccccccccccceeccee
Confidence 588999998754321 122111 11 122233 555555542 2357788887765432111111111111
Q ss_pred EEecCCCEEEEEeCCC-----cEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEecCC------eEEEEEcCCC
Q psy12614 118 SVHKKKRLLAAGTEQG-----HINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTGCAA------AVRVWDIHKG 186 (708)
Q Consensus 118 ~~s~~~~~la~~~~d~-----~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d------~i~iwd~~~~ 186 (708)
+...+++.++.++.++ ....+|..+..................+ .. ++..++.++.+ .+..||..++
T Consensus 97 ~~~~~~~i~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~-~~-~~~~~~~GG~~~~~~~~~~~~~d~~~~ 174 (288)
T d1zgka1 97 VGVIDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVA-VL-NRLLYAVGGFDGTNRLNSAECYYPERN 174 (288)
T ss_dssp EEEETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEE-EE-TTEEEEECCBCSSCBCCCEEEEETTTT
T ss_pred ccccceeeEEecceecccccceeeeeccccCccccccccccccccceee-ee-eecceEecCcccccccceEEEeecccc
Confidence 1222555555554333 3455776666553211111111111122 22 34445555442 4788888765
Q ss_pred ceEEEEEecccCCCCCceeEEEEEEccCCE-EEEEcCC-----CcEEEEeCCCCeeEEEeeccccCe-EEEEEeCCCCEE
Q psy12614 187 HAIHKMSLDKSSKFSKNTAVWCVAFCADFT-IITGDSG-----GFVRFWDGKTGVQWSDVKTHKKDI-LALTVSEDENYL 259 (708)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~d-----g~i~~wd~~~~~~~~~~~~~~~~i-~~~~~s~~~~~l 259 (708)
+....-.... .....+.+.. ++. ++.|+.+ .....+|..+.+....-....... .+++. .+++.+
T Consensus 175 ~~~~~~~~~~------~~~~~~~~~~-~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~-~~~~l~ 246 (288)
T d1zgka1 175 EWRMITAMNT------IRSGAGVCVL-HNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSALGITV-HQGRIY 246 (288)
T ss_dssp EEEECCCCSS------CCBSCEEEEE-TTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE-ETTEEE
T ss_pred cccccccccc------ccccccccce-eeeEEEecCccccccccceeeeeecceeeecccCccCcccceEEEE-ECCEEE
Confidence 5432221111 1111122222 344 4444433 356788877765443222111111 12332 367777
Q ss_pred EEEecCC-----eEEEEEccC
Q psy12614 260 YCAGVDP-----TVVCFQRTR 275 (708)
Q Consensus 260 ~~~~~dg-----~i~iw~~~~ 275 (708)
+.|+.++ .+.+||+.+
T Consensus 247 v~GG~~~~~~~~~v~~yd~~~ 267 (288)
T d1zgka1 247 VLGGYDGHTFLDSVECYDPDT 267 (288)
T ss_dssp EECCBCSSCBCCEEEEEETTT
T ss_pred EEecCCCCeecceEEEEECCC
Confidence 7776654 478898887
|
| >d1h6la_ b.68.3.1 (A:) Thermostable phytase (3-phytase) {Bacillus amyloliquefaciens [TaxId: 1390]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Thermostable phytase (3-phytase) family: Thermostable phytase (3-phytase) domain: Thermostable phytase (3-phytase) species: Bacillus amyloliquefaciens [TaxId: 1390]
Probab=92.04 E-value=4.1 Score=36.73 Aligned_cols=201 Identities=8% Similarity=0.113 Sum_probs=114.0
Q ss_pred EEEEcC---CCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEe------CC--EEEEEc-CC---CcEEE
Q psy12614 31 CIACEP---KSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWF------ND--RLFSGG-LQ---GFVNE 95 (708)
Q Consensus 31 ~~~~s~---~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~------~~--~l~s~~-~d---~~i~v 95 (708)
++-++| +..+++.....+-|.+||++ |+.+. .+.. +.++.|..- ++ -++.++ .+ .+|.+
T Consensus 30 AIW~n~~~p~~SlI~gTdK~~Gl~vYdL~-G~~l~-~~~~----Gr~NNVDvr~~~~l~~~~~di~vasnR~~~~~~l~~ 103 (353)
T d1h6la_ 30 AIWLDPKNPQNSKLITTNKKSGLAVYSLE-GKMLH-SYHT----GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEI 103 (353)
T ss_dssp EEECCSSCGGGCEEEEEETTSCCEEEETT-CCEEE-ECCS----SCEEEEEEEEEEEETTEEEEEEEEEECCTTTCEEEE
T ss_pred eEEcCCCCcCccEEEEEcCcCCEEEEcCC-CcEEE-eccc----CCcCccccccccccCCcceEEEEEeCCcCcceeEEE
Confidence 344454 45566666667779999986 67665 4432 456665543 11 234443 32 36888
Q ss_pred EECCC-CeEeEEEeec-------CCceEEEEE--ecC-CC-EEEEEeCCCcEEEEEcc---CCcEE--EEEecccccccE
Q psy12614 96 YDMRR-LNIKSSTAVT-------SGTCWCLSV--HKK-KR-LLAAGTEQGHINLFQIS---DEGLL--YEKLLDRQQGRI 158 (708)
Q Consensus 96 wd~~~-~~~~~~~~~~-------~~~v~~~~~--s~~-~~-~la~~~~d~~i~iwd~~---~~~~~--~~~~~~~~~~~v 158 (708)
|.+.. ...+..+... ...+..+|+ ++. |. ++++...+|.+..|.+. .+... ..+.+. ....+
T Consensus 104 ~~id~~~~~l~~~~~~~~p~~~~~~~vYGlc~y~~~~~g~~~afv~~k~G~v~q~~l~~~~~g~v~~~lvr~f~-~~~q~ 182 (353)
T d1h6la_ 104 YAIDGKNGTLQSITDPNRPIASAIDEVYGFSLYHSQKTGKYYAMVTGKEGEFEQYELNADKNGYISGKKVRAFK-MNSQT 182 (353)
T ss_dssp EEEETTTTEEEECSCSSSCEECSSSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSSEEEEEEEEEE-CSSCE
T ss_pred EEecCcccccccccccccccccccCcceEEEEEecCCCCeEEEEEEcCCceEEEEEEEcCCCCceeeEeeeccC-CCCcc
Confidence 87753 2233333221 124667777 554 44 45566778999888774 23222 112332 34578
Q ss_pred EEEEECCCCCEEEEecCC-eEEEEEcCC--CceEEEEEecccCCCCCceeEEEEEEc--cCC--E-EEEEcCCCcEEEEe
Q psy12614 159 LCTAWHSSGDYLVTGCAA-AVRVWDIHK--GHAIHKMSLDKSSKFSKNTAVWCVAFC--ADF--T-IITGDSGGFVRFWD 230 (708)
Q Consensus 159 ~~~~~s~d~~~l~~~~~d-~i~iwd~~~--~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~--~-l~~~~~dg~i~~wd 230 (708)
..+.+.++...|+.+-++ .|..++... +.....+...... .....+..++.- +++ . +++.-.+++..+||
T Consensus 183 EGCVvDde~~~LyisEE~~Giw~~~a~~~~~~~~~~i~~~~g~--~l~~D~EGlaiy~~~~~~GylivSsQG~n~f~vyd 260 (353)
T d1h6la_ 183 EGMAADDEYGSLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGR--HLTPDIEGLTIYYAADGKGYLLASSQGNSSYAIYE 260 (353)
T ss_dssp EEEEEETTTTEEEEEETTTEEEEEESSTTSCSCCEEEEECSSS--SCCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEE
T ss_pred ceEEEeCCCCcEEEecCccceEEEEeccCCCccceeeecccCc--cccCCccccEEEEcCCCCeEEEEEcCCCCeEEEEe
Confidence 899999999999999988 887777642 2222222111111 124556666643 343 3 44555578899999
Q ss_pred CCCC-eeEEEe
Q psy12614 231 GKTG-VQWSDV 240 (708)
Q Consensus 231 ~~~~-~~~~~~ 240 (708)
..+. +.+..+
T Consensus 261 r~~~~~~~g~F 271 (353)
T d1h6la_ 261 RQGQNKYVADF 271 (353)
T ss_dssp SSTTCCEEEEE
T ss_pred cCCCccccceE
Confidence 8663 555454
|
| >d1crua_ b.68.2.1 (A:) Soluble quinoprotein glucose dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Soluble quinoprotein glucose dehydrogenase family: Soluble quinoprotein glucose dehydrogenase domain: Soluble quinoprotein glucose dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Probab=90.43 E-value=7.4 Score=36.69 Aligned_cols=56 Identities=13% Similarity=0.053 Sum_probs=40.9
Q ss_pred CCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecc------cccccEEEEEECCC
Q psy12614 111 SGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLD------RQQGRILCTAWHSS 166 (708)
Q Consensus 111 ~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~------~~~~~v~~~~~s~d 166 (708)
-...++|+|.|||++|++--..|.|++++..+++......+. .-++....|+|+|+
T Consensus 26 L~~P~~la~~pdg~llVter~~G~i~~v~~~~g~~~~i~~~~~~~~~~~ge~GLLgia~~Pd 87 (450)
T d1crua_ 26 LNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPD 87 (450)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTT
T ss_pred CCCceEEEEeCCCeEEEEEecCCEEEEEECCCCcEeecccCCccccccCCCCceeeEEeCCC
Confidence 356789999999998877544799999998887664333322 12356889999986
|
| >d1crua_ b.68.2.1 (A:) Soluble quinoprotein glucose dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Soluble quinoprotein glucose dehydrogenase family: Soluble quinoprotein glucose dehydrogenase domain: Soluble quinoprotein glucose dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Probab=85.97 E-value=3.5 Score=39.03 Aligned_cols=108 Identities=5% Similarity=-0.030 Sum_probs=59.6
Q ss_pred CCceEEEEeCCCCcEEEEEc-CCceEEEEEEecCCcceeEEeecCCcc---cc-cceeEEEEEecC---CCeEEEEec--
Q psy12614 403 NATIRCSVVSNDGKYVAYST-ESCVRLHSLDLDGDKPQISRIKNLPAP---LF-KSIFTHVLISAD---STLLLAVSL-- 472 (708)
Q Consensus 403 ~~~i~~~~~s~~g~~l~~~~-d~~i~i~~~~~~~~~~~~~~~~~~~~~---~~-~~~i~~~~~s~d---~~~l~~~~~-- 472 (708)
-...++++|.|||+++++-. .|.|++++... +. ...+..++.- .. ......++|+|+ ..++.....
T Consensus 26 L~~P~~la~~pdg~llVter~~G~i~~v~~~~--g~--~~~i~~~~~~~~~~~ge~GLLgia~~Pdf~~n~~iYvsyt~~ 101 (450)
T d1crua_ 26 LNKPHALLWGPDNQIWLTERATGKILRVNPES--GS--VKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFK 101 (450)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTT--CC--EEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEE
T ss_pred CCCceEEEEeCCCeEEEEEecCCEEEEEECCC--Cc--EeecccCCccccccCCCCceeeEEeCCCCccCCEEEEEEecC
Confidence 45678999999999999875 79888876443 22 2222223221 11 345566999985 334433211
Q ss_pred -----CC----c--EEEe--cCCCe------EEEEEecCCCCCccCcceEEEEECCCCcEEEEEe
Q psy12614 473 -----NG----P--LYII--DLSSL------EIKYCVDPYKSNLMSDVISLVQMSECKQYIVCAD 518 (708)
Q Consensus 473 -----dg----~--i~~~--~~~~~------~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~ 518 (708)
+. . ++.. +.... ..+..+.....| ....++|.|||.+.++.+
T Consensus 102 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~i~~~~p~~~~H----~gg~l~fgpDG~LYvs~G 162 (450)
T d1crua_ 102 NPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDH----QSGRLVIGPDQKIYYTIG 162 (450)
T ss_dssp CTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSC----CEEEEEECTTSCEEEEEC
T ss_pred CCCCcccccccceEEEeeecccccccccceEEEeecccccccc----cccceeEcCCCCEEEEec
Confidence 11 1 2222 21111 122233333344 667999999998777655
|
| >d1jtdb_ b.69.5.2 (B:) beta-lactamase inhibitor protein-II, BLIP-II {Streptomyces exfoliatus [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: RCC1/BLIP-II family: beta-lactamase inhibitor protein-II, BLIP-II domain: beta-lactamase inhibitor protein-II, BLIP-II species: Streptomyces exfoliatus [TaxId: 1905]
Probab=85.80 E-value=7 Score=33.78 Aligned_cols=220 Identities=10% Similarity=-0.031 Sum_probs=101.3
Q ss_pred CcEEEEEEeCCEEEEEcCCCcEEEEECCCCeEeEEEeecCCceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEec
Q psy12614 72 NSIECLTWFNDRLFSGGLQGFVNEYDMRRLNIKSSTAVTSGTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLL 151 (708)
Q Consensus 72 ~~v~~l~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~ 151 (708)
..|..|+-.....+... ||.|..|-.....++-.-......|..++.- ....+. -.|+.+..|........ ...
T Consensus 26 ~~i~~va~G~~h~~al~-dG~v~~wG~N~~GQlG~~~~~~~~v~~v~~G--~~~~~a-l~dg~v~~wG~~~~gq~--~~~ 99 (273)
T d1jtdb_ 26 SGVDAIAGGYFHGLALK-GGKVLGWGANLNGQLTMPAATQSGVDAIAAG--NYHSLA-LKDGEVIAWGGNEDGQT--TVP 99 (273)
T ss_dssp SSEEEEEECSSEEEEEE-TTEEEEEECCTTSTTSCCGGGGSCCCEEEEC--SSEEEE-EETTEEEEEECCTTSTT--CCC
T ss_pred CCcEEEEccCCEEEEEE-CCEEEEEeCCCCCceeeeecccccceEEecC--CCceee-eeeeeeeccCCCcceee--ccc
Confidence 56888877644444444 8999999766543222111222344444432 222222 24889999986432211 111
Q ss_pred ccccccEEEEEECCCCCEEEEecCC-eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEEEEcCCCcEEEEe
Q psy12614 152 DRQQGRILCTAWHSSGDYLVTGCAA-AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSGGFVRFWD 230 (708)
Q Consensus 152 ~~~~~~v~~~~~s~d~~~l~~~~~d-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~~wd 230 (708)
......+..++.... ..+.. .| .+..|.-........ ... ....|..++-. ...++ ...++.+..|-
T Consensus 100 ~~~~~~~~~i~~~~~--~~~~~-~dg~v~~~g~~~~~~~~~-~~~------~~~~v~~~~~~-~~~~~-~~~~g~~~~~G 167 (273)
T d1jtdb_ 100 AEARSGVDAIAAGAW--ASYAL-KDGKVIAWGDDSDGQTTV-PAE------AQSGVTALDGG-VYTAL-AVKNGGVIAWG 167 (273)
T ss_dssp GGGGSSCCEEEEETT--EEEEE-ETTEEEEEECCTTSTTSC-CGG------GGSSEEEEEEC-SSEEE-EEETTEEEEEE
T ss_pred cccccceeEEeeecc--ccccc-ccccceecccCCCCceee-ecc------CCceEEEEecc-ceeee-eecccceeEee
Confidence 111222333333222 22222 24 777776433221111 000 12334443322 12222 33467788886
Q ss_pred CCCCeeEEEeeccccCeEEEEEeCCCCEEEEEecCCeEEEEEccCCcccccCCCCCCCCcceEEeEEEeccccceEEEEE
Q psy12614 231 GKTGVQWSDVKTHKKDILALTVSEDENYLYCAGVDPTVVCFQRTRKPQVCSTSGPEQGSSVWVRSVNRVIHEGDVKSLAL 310 (708)
Q Consensus 231 ~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~l~~ 310 (708)
................|..++.... ..+.- .||.|+.|=.... |+ +.........|..|+.
T Consensus 168 ~~~~g~~~~~~~~~~~v~~Is~G~~--h~~~l-~dG~v~~WG~n~~-------Gq---------l~~~~~~~~~v~~I~~ 228 (273)
T d1jtdb_ 168 DNYFGQTTVPAEAQSGVDDVAGGIF--HSLAL-KDGKVIAWGDNRY-------KQ---------TTVPTEALSGVSAIAS 228 (273)
T ss_dssp CCTTSTTSCCGGGSSSEEEEEECSS--EEEEE-ETTEEEEEECCTT-------ST---------TCCCGGGGSSCCEEEE
T ss_pred cccCCcccccccccCCccceeccce--eeEEE-ecCcEEEcCCCCC-------Cc---------cCCCccCCCCcEEEEe
Confidence 5432222111223456777765433 22222 3799999965441 11 0001112245666665
Q ss_pred e-CCEEEEEcCCCeEEEEeCC
Q psy12614 311 H-GNRLYSGGLDSYLSLSYYP 330 (708)
Q Consensus 311 ~-~~~l~s~~~d~~i~iw~~~ 330 (708)
. ...++. .|+.|..|-..
T Consensus 229 G~~~~~~l--~~g~v~~WG~~ 247 (273)
T d1jtdb_ 229 GEWYSLAL--KNGKVIAWGSS 247 (273)
T ss_dssp CSSCEEEE--ETTEEEEESTT
T ss_pred CcceEEEE--ECCEEEEECCC
Confidence 5 333333 37899999543
|
| >d2hu7a1 b.69.7.2 (A:9-321) Acylamino-acid-releasing enzyme, N-terminal donain {Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Peptidase/esterase 'gauge' domain family: Acylamino-acid-releasing enzyme, N-terminal donain domain: Acylamino-acid-releasing enzyme, N-terminal donain species: Aeropyrum pernix [TaxId: 56636]
Probab=83.52 E-value=9.9 Score=30.79 Aligned_cols=212 Identities=12% Similarity=0.071 Sum_probs=119.5
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCCeEEEEEecCCCCCcEEEEEEeCCEEEEEcCCCcEEEEECCCCeEeEE----------
Q psy12614 37 KSSRLAVSRADQSIEIWDISETPHVDRVFIGDPLSNSIECLTWFNDRLFSGGLQGFVNEYDMRRLNIKSS---------- 106 (708)
Q Consensus 37 ~~~~la~~~~dg~v~iwd~~~~~~~~~~~~~h~~~~~v~~l~~~~~~l~s~~~d~~i~vwd~~~~~~~~~---------- 106 (708)
+.++|+++...|.+.++-+..++.+. +.. .+|.....-. .+-|-.+.+-|++.|+.++.
T Consensus 25 ~d~ll~~~~seG~vni~~l~g~~~vk--Ltk----ePI~~~~~Pk-----~~ldfi~f~RDV~kGkE~Hai~~~Nlk~~G 93 (313)
T d2hu7a1 25 GDKLLVVGFSEGSVNAYLYDGGETVK--LNR----EPINSVLDPH-----YGVGRVILVRDVSKGAEQHALFKVNTSRPG 93 (313)
T ss_dssp TTEEEEEEEETTEEEEEEESSSSCEE--CCS----SCCSEECEEC-----TTBSEEEEEEECSTTSCCEEEEEEETTSTT
T ss_pred CCcEEEEEeccceEEEEEEeCCEEEE--Eec----ccccCcCCCc-----cCcceEEEEeehhcCcceeeEEEEccCCCC
Confidence 34578888788999999998877653 222 2333322220 01122233334444443322
Q ss_pred ----EeecC-CceEEEEEecCCCEEEEEeCCCcEEEEEccCCcEEEEEecccccccEEEEEECCCCCEEEEe----cCC-
Q psy12614 107 ----TAVTS-GTCWCLSVHKKKRLLAAGTEQGHINLFQISDEGLLYEKLLDRQQGRILCTAWHSSGDYLVTG----CAA- 176 (708)
Q Consensus 107 ----~~~~~-~~v~~~~~s~~~~~la~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~----~~d- 176 (708)
+.... -.|.+++.. |.+..++|+......+|-+++|++.....+.+. +-|+.+. +++++-. +..
T Consensus 94 EE~~i~spk~vRI~S~~yd-dk~vvF~Gased~~~LYviegGklrkL~~vPpF-sFVtDI~----~d~I~G~g~~~g~~~ 167 (313)
T d2hu7a1 94 EEQRLEAVKPMRILSGVDT-GEAVVFTGATEDRVALYALDGGGLRELARLPGF-GFVSDIR----GDLIAGLGFFGGGRV 167 (313)
T ss_dssp CEEECTTSCSBEEEEEEEC-SSCEEEEEECSSCEEEEEEETTEEEEEEEESSC-EEEEEEE----TTEEEEEEEEETTEE
T ss_pred eeeEecCCceEEEEEeeec-CceEEEecccCCceEEEEEeCCceeeeccCCCc-ceEEecc----CCeEEEEeeecCCcc
Confidence 21111 234444442 334556777778899999999988654454432 2344443 4555421 122
Q ss_pred eEEEEEcCCCceEEEEEecccCCCCCceeEEEEEEccCCEEEEEcCC---CcEEEEeCCCCeeEEE-eec------cccC
Q psy12614 177 AVRVWDIHKGHAIHKMSLDKSSKFSKNTAVWCVAFCADFTIITGDSG---GFVRFWDGKTGVQWSD-VKT------HKKD 246 (708)
Q Consensus 177 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d---g~i~~wd~~~~~~~~~-~~~------~~~~ 246 (708)
...+=|+.+|.. +.+. ..++.++...+.++.+++++-.. ....-+|+++++.-.. ++. ..-.
T Consensus 168 sfF~adl~SG~l-ri~t-------pkeGS~~~ay~~~gnKV~sdyEt~gEsywit~D~~s~~yerve~P~kd~~sy~p~~ 239 (313)
T d2hu7a1 168 SLFTSNLSSGGL-RVFD-------SGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVEDLELPSKDFSSYRPTA 239 (313)
T ss_dssp EEEEEETTTEEE-EEEC-------CSSEEEEEEEECTTSCEEEEEEESSCEEEEEECTTTCCEEECCCSSCHHHHHCCSE
T ss_pred eEEEEecccCCE-EEec-------CCCCcccceeEccCceeeeccCCCCceEEEEEecccCceeeeecCcccceeecceE
Confidence 455556544432 2222 22777888888888877554332 2222558887754332 221 2345
Q ss_pred eEEEEEeCCCCEEEEEecCCeEEEEEc
Q psy12614 247 ILALTVSEDENYLYCAGVDPTVVCFQR 273 (708)
Q Consensus 247 i~~~~~s~~~~~l~~~~~dg~i~iw~~ 273 (708)
|+-+-+.|++++++.+-.||.-.+|.-
T Consensus 240 I~~~~Y~Pdd~L~iiakrdG~s~lF~n 266 (313)
T d2hu7a1 240 ITWLGYLPDGRLAVVARREGRSAVFID 266 (313)
T ss_dssp EEEEEECTTSCEEEEEEETTEEEEEET
T ss_pred EEeeeeCCCCcEEEEEecCCchheeec
Confidence 666779999999999999999999875
|
| >d1tl2a_ b.67.1.1 (A:) Tachylectin-2 {Japanese horseshoe crab (Tachypleus tridentatus) [TaxId: 6853]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Tachylectin-2 family: Tachylectin-2 domain: Tachylectin-2 species: Japanese horseshoe crab (Tachypleus tridentatus) [TaxId: 6853]
Probab=82.87 E-value=9.7 Score=30.22 Aligned_cols=159 Identities=6% Similarity=-0.033 Sum_probs=86.5
Q ss_pred cCCCceEEEEeCCCCcEEEEEcCCceEEEEEEecCCcc---eeEEeecCCcccccceeEEEEEecCCCeEEEEecCCcEE
Q psy12614 401 VNNATIRCSVVSNDGKYVAYSTESCVRLHSLDLDGDKP---QISRIKNLPAPLFKSIFTHVLISADSTLLLAVSLNGPLY 477 (708)
Q Consensus 401 ~~~~~i~~~~~s~~g~~l~~~~d~~i~i~~~~~~~~~~---~~~~~~~~~~~~~~~~i~~~~~s~d~~~l~~~~~dg~i~ 477 (708)
+.-..+.-++|||+|.+.++-.+ .++.=.+.+...+. .-+++. .+. -.....+.|.|.|-+-++. ++.+|
T Consensus 37 ~g~~n~~~i~fsP~G~LyaVr~~-~lY~Gp~~s~~nq~wf~~atrIG--~gg--Wn~FkflffdP~G~LyaVt--~~~LY 109 (235)
T d1tl2a_ 37 GGWSNFKFLFLSPGGELYGVLND-KIYKGTPPTHDNDNWMGRAKKIG--NGG--WNQFQFLFFDPNGYLYAVS--KDKLY 109 (235)
T ss_dssp SSCTTCSEEEECTTSCEEEEETT-EEEEESCCCSTTCCHHHHCEEEE--CSC--GGGCSEEEECTTSCEEEEE--TTEEE
T ss_pred ccccceeEEEECCCCcEEEEECC-eEEECCCCCcchHHHHHhhhhcc--cCc--ccceEEEEECCCceEEEec--Cccee
Confidence 44566778999999998888555 33222222211110 011111 000 1123348899999777766 35677
Q ss_pred EecCCCeEE------EEEecCCCCCccCcceEEEEECCCCcEEEEEecCCeEEEEECCce--------eeec-CCCCCCc
Q psy12614 478 IIDLSSLEI------KYCVDPYKSNLMSDVISLVQMSECKQYIVCADRKSHVVIWKNGQH--------HASL-PRYRKPS 542 (708)
Q Consensus 478 ~~~~~~~~~------~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~--------~~~~-~~~~~~v 542 (708)
.-...+-+. ...+-... -..+..+.|.|+|.+-++. .| .++-+.-... ...+ .++-...
T Consensus 110 r~~pPtn~~q~W~g~a~~vG~~g----w~df~~lFFdP~G~LYaV~-~~-~l~k~~pP~~~~d~WL~~st~igr~~w~~~ 183 (235)
T d1tl2a_ 110 KASPPQSDTDNWIARATEVGSGG----WSGFKFLFFHPNGYLYAVH-GQ-QFYKALPPVSNQDNWLARATKIGQGGWDTF 183 (235)
T ss_dssp EESCCCSTTCCHHHHSEEEECSS----GGGEEEEEECTTSCEEEEE-TT-EEEEECCCSSTTCCHHHHCEEEESSSGGGE
T ss_pred cCCcCcccchhhhhhhhhhccCC----cCceeEEEECCCceEEEEE-CC-cEEEcCCCCCCCchhhhhhhhhccCcccCc
Confidence 764332110 01121111 4467899999999887774 34 4666654411 1122 2455566
Q ss_pred eEEEEcCCCCEEEEEecCCcEEEEEcCCCCCC
Q psy12614 543 TAMAIHPTLSTLVTVYSDHRIVEFDLNRKAFT 574 (708)
Q Consensus 543 ~~l~~s~d~~~l~~~~~dg~i~vwd~~~~~~~ 574 (708)
.-+.|+|+|++-.+- .+.++.=..++..+.
T Consensus 184 ~fi~Fs~dG~L~~v~--~g~~Y~~~~P~~~~~ 213 (235)
T d1tl2a_ 184 KFLFFSSVGTLFGVQ--GGKFYEDYPPSYAYD 213 (235)
T ss_dssp EEEEECTTSCEEEEE--TTEEEEESCCCSTTC
T ss_pred eEEEECCCCcEEEEe--CCeEEecCCCCCCCc
Confidence 789999999987763 355554444454444
|
| >d1tl2a_ b.67.1.1 (A:) Tachylectin-2 {Japanese horseshoe crab (Tachypleus tridentatus) [TaxId: 6853]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 5-bladed beta-propeller superfamily: Tachylectin-2 family: Tachylectin-2 domain: Tachylectin-2 species: Japanese horseshoe crab (Tachypleus tridentatus) [TaxId: 6853]
Probab=80.17 E-value=12 Score=29.62 Aligned_cols=140 Identities=7% Similarity=-0.024 Sum_probs=81.3
Q ss_pred eeEEEEEecCCCeEEEEecCCcEEEecCCCeEE------EEEecCCCCCccCcceEEEEECCCCcEEEEEecCCeEEEEE
Q psy12614 454 IFTHVLISADSTLLLAVSLNGPLYIIDLSSLEI------KYCVDPYKSNLMSDVISLVQMSECKQYIVCADRKSHVVIWK 527 (708)
Q Consensus 454 ~i~~~~~s~d~~~l~~~~~dg~i~~~~~~~~~~------~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~ 527 (708)
.+..++|||+|.+.++... .+|.=...++.- -+.+-. +. =.....+.|.|.|-+-++. ++ .+|.
T Consensus 41 n~~~i~fsP~G~LyaVr~~--~lY~Gp~~s~~nq~wf~~atrIG~--gg--Wn~FkflffdP~G~LyaVt--~~--~LYr 110 (235)
T d1tl2a_ 41 NFKFLFLSPGGELYGVLND--KIYKGTPPTHDNDNWMGRAKKIGN--GG--WNQFQFLFFDPNGYLYAVS--KD--KLYK 110 (235)
T ss_dssp TCSEEEECTTSCEEEEETT--EEEEESCCCSTTCCHHHHCEEEEC--SC--GGGCSEEEECTTSCEEEEE--TT--EEEE
T ss_pred ceeEEEECCCCcEEEEECC--eEEECCCCCcchHHHHHhhhhccc--Cc--ccceEEEEECCCceEEEec--Cc--ceec
Confidence 4455999999998876532 455432221110 011111 11 2345678999999777766 34 5665
Q ss_pred CC--ceee-------ecCCC--CCCceEEEEcCCCCEEEEEecCCcEEEEEcCCCCCCchhhhhhccCchhhhcCCCCee
Q psy12614 528 NG--QHHA-------SLPRY--RKPSTAMAIHPTLSTLVTVYSDHRIVEFDLNRKAFTTFSRKLETNHPNEWLSRQLPVL 596 (708)
Q Consensus 528 ~~--~~~~-------~~~~~--~~~v~~l~~s~d~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 596 (708)
-. +..+ ...+. =+.+..+-|.|+|.+-++ . +..++-+.-+.+....|......- - .++-....
T Consensus 111 ~~pPtn~~q~W~g~a~~vG~~gw~df~~lFFdP~G~LYaV-~-~~~l~k~~pP~~~~d~WL~~st~i-g---r~~w~~~~ 184 (235)
T d1tl2a_ 111 ASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAV-H-GQQFYKALPPVSNQDNWLARATKI-G---QGGWDTFK 184 (235)
T ss_dssp ESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEE-E-TTEEEEECCCSSTTCCHHHHCEEE-E---SSSGGGEE
T ss_pred CCcCcccchhhhhhhhhhccCCcCceeEEEECCCceEEEE-E-CCcEEEcCCCCCCCchhhhhhhhh-c---cCcccCce
Confidence 54 1111 11111 135678999999987776 3 335888887777766665332221 0 23444567
Q ss_pred EEEeCCCCCceEE
Q psy12614 597 GIEFDPQDSSLIY 609 (708)
Q Consensus 597 ~l~~s~~~~~l~~ 609 (708)
-+.|+|+|....+
T Consensus 185 fi~Fs~dG~L~~v 197 (235)
T d1tl2a_ 185 FLFFSSVGTLFGV 197 (235)
T ss_dssp EEEECTTSCEEEE
T ss_pred EEEECCCCcEEEE
Confidence 8999999986555
|