Psyllid ID: psy12663


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------
MTNQYRATISYMQFNQQFYLIDNLDRMLRLILLSLSSLVLAIVLFSSTSKGCNEAVCASIVSKCMITQSCKCDMKNCTCCKDCLNCLSYLWTECCSCVAWEQMESRS
cccccEEEEEEEEEccEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHccHHccccccccc
ccccEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHcccHHEEHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHcccccHHHccccc
MTNQYRATISYMQFNQQFYLIDNLDRMLRLILLSLSSLVLAIVLFSstskgcneAVCASIVSKCMitqsckcdmknctcckdclnclSYLWTECCSCVAWEQMESRS
MTNQYRATISYMQFNQQFYLIDNLDRMLRLILLSLSSLVLAIVLFSSTSKGCNEAVCASIVSKCMITQSCKCDMKNCTCCKDCLNCLSYLWTECCSCVAWEQMESRS
MTNQYRATISYMQFNQQFYlidnldrmlrlillslsslvlaivlfssTSKGCNEAVCASIVSKCMITQSCKCDMKNCTCCKDCLNCLSYLWTECCSCVAWEQMESRS
*****RATISYMQFNQQFYLIDNLDRMLRLILLSLSSLVLAIVLFSSTSKGCNEAVCASIVSKCMITQSCKCDMKNCTCCKDCLNCLSYLWTECCSCVAWE******
*****RA*ISYMQFNQQFYLIDNLDRMLRLILLSLSSLVLAIVLFSSTSKGCNEAVCASIVSKCMITQSCKCDMKNCTCCKDCLNCLSYLWTECCSCVA*EQM****
MTNQYRATISYMQFNQQFYLIDNLDRMLRLILLSLSSLVLAIVLFSSTSKGCNEAVCASIVSKCMITQSCKCDMKNCTCCKDCLNCLSYLWTECCSCVAWEQMESRS
*TNQYRATISYMQFNQQFYLIDNLDRMLRLILLSLSSLVLAIVLFSSTSKGCNEAVCASIVSKCMITQSCKCDMKNCTCCKDCLNCLSYLWTECCSCVAWEQ*****
iiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MTNQYRATISYMQFNQQFYLIDNLDRMLRLILLSLSSLVLAIVLFSSTSKGCNEAVCASIVSKCMITQSCKCDMKNCTCCKDCLNCLSYLWTECCSCVAWEQMESRS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query107 2.2.26 [Sep-21-2011]
P54356 249 Protein twisted gastrulat no N/A 0.570 0.244 0.571 4e-14
Q9EP52 222 Twisted gastrulation prot yes N/A 0.644 0.310 0.479 1e-10
Q9GZX9 223 Twisted gastrulation prot yes N/A 0.635 0.304 0.479 1e-09
Q5RAW4 223 Twisted gastrulation prot yes N/A 0.635 0.304 0.479 1e-09
Q98T89 224 Twisted gastrulation prot yes N/A 0.457 0.218 0.568 4e-09
Q9DGH0 217 Twisted gastrulation prot yes N/A 0.457 0.225 0.568 6e-09
Q98SR9 222 Twisted gastrulation prot no N/A 0.457 0.220 0.549 2e-08
Q98T88 216 Twisted gastrulation prot N/A N/A 0.448 0.222 0.56 4e-08
Q9I8M9 218 Twisted gastrulation prot N/A N/A 0.448 0.220 0.56 4e-08
>sp|P54356|TSG_DROME Protein twisted gastrulation OS=Drosophila melanogaster GN=tsg PE=1 SV=1 Back     alignment and function desciption
 Score = 76.6 bits (187), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 36/63 (57%), Positives = 45/63 (71%), Gaps = 2/63 (3%)

Query: 38 LVLAIVLFSS--TSKGCNEAVCASIVSKCMITQSCKCDMKNCTCCKDCLNCLSYLWTECC 95
          L + I  +SS     GCNE VC S+VSKC+ITQSC+C + +C CCKDCLNCL  L+ ECC
Sbjct: 10 LFVGIAPWSSLANDDGCNEVVCGSVVSKCLITQSCQCKLNDCHCCKDCLNCLGELYIECC 69

Query: 96 SCV 98
           C+
Sbjct: 70 GCL 72




Involved in dorsal-ventral patterning. Required for specification of a narrow strip of dorsal midline cells that will give rise to the amnioserosa, but not for specification of dorsal ectoderm cells. Inhibits BMP signaling; enhances the binding of sog to dpp, thus enhancing the antagonistic activity of sog.
Drosophila melanogaster (taxid: 7227)
>sp|Q9EP52|TWSG1_MOUSE Twisted gastrulation protein homolog 1 OS=Mus musculus GN=Twsg1 PE=1 SV=1 Back     alignment and function description
>sp|Q9GZX9|TWSG1_HUMAN Twisted gastrulation protein homolog 1 OS=Homo sapiens GN=TWSG1 PE=2 SV=1 Back     alignment and function description
>sp|Q5RAW4|TWSG1_PONAB Twisted gastrulation protein homolog 1 OS=Pongo abelii GN=TWSG1 PE=2 SV=1 Back     alignment and function description
>sp|Q98T89|TWSG1_CHICK Twisted gastrulation protein homolog 1 OS=Gallus gallus GN=TWSG1 PE=2 SV=1 Back     alignment and function description
>sp|Q9DGH0|TWS1A_DANRE Twisted gastrulation protein homolog 1-A OS=Danio rerio GN=twsg1a PE=2 SV=1 Back     alignment and function description
>sp|Q98SR9|TWS1B_DANRE Twisted gastrulation protein homolog 1-B OS=Danio rerio GN=twsg1b PE=2 SV=1 Back     alignment and function description
>sp|Q98T88|TWS1A_XENLA Twisted gastrulation protein homolog 1-A OS=Xenopus laevis GN=twsg1-a PE=1 SV=1 Back     alignment and function description
>sp|Q9I8M9|TWS1B_XENLA Twisted gastrulation protein homolog 1-B OS=Xenopus laevis GN=twsg1-b PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query107
242022400 259 protein twisted gastrulation precursor, 0.654 0.270 0.633 1e-18
321459837 266 hypothetical protein DAPPUDRAFT_202071 [ 0.635 0.255 0.652 2e-17
312379619 273 hypothetical protein AND_08472 [Anophele 0.672 0.263 0.583 2e-16
357631164 240 hypothetical protein KGM_18788 [Danaus p 0.588 0.262 0.632 5e-16
193671723 234 PREDICTED: protein twisted gastrulation- 0.598 0.273 0.656 7e-16
383865192 244 PREDICTED: protein twisted gastrulation- 0.626 0.274 0.602 8e-16
156538991 248 PREDICTED: protein twisted gastrulation- 0.672 0.290 0.592 8e-16
322795178 278 hypothetical protein SINV_00211 [Solenop 0.644 0.248 0.565 1e-15
307200071 248 Protein twisted gastrulation [Harpegnath 0.626 0.270 0.623 1e-15
189235436 239 PREDICTED: similar to conserved hypothet 0.616 0.276 0.617 1e-15
>gi|242022400|ref|XP_002431628.1| protein twisted gastrulation precursor, putative [Pediculus humanus corporis] gi|212516936|gb|EEB18890.1| protein twisted gastrulation precursor, putative [Pediculus humanus corporis] Back     alignment and taxonomy information
 Score = 97.4 bits (241), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 45/71 (63%), Positives = 62/71 (87%), Gaps = 1/71 (1%)

Query: 28 LRLILLSLSSLVLAIVLFSSTSKGCNEAVCASIVSKCMITQSCKCDMKNCTCCKDCLNCL 87
          +R+IL +++  + AI++F+S  + CNEAVCAS+VSKCM+TQSCKCD+KNC+CC++C  CL
Sbjct: 4  IRIILFTVTISISAILIFNSV-ESCNEAVCASVVSKCMLTQSCKCDLKNCSCCQECFTCL 62

Query: 88 SYLWTECCSCV 98
          SYL+TECCSCV
Sbjct: 63 SYLYTECCSCV 73




Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|321459837|gb|EFX70886.1| hypothetical protein DAPPUDRAFT_202071 [Daphnia pulex] Back     alignment and taxonomy information
>gi|312379619|gb|EFR25835.1| hypothetical protein AND_08472 [Anopheles darlingi] Back     alignment and taxonomy information
>gi|357631164|gb|EHJ78812.1| hypothetical protein KGM_18788 [Danaus plexippus] Back     alignment and taxonomy information
>gi|193671723|ref|XP_001948538.1| PREDICTED: protein twisted gastrulation-like [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|383865192|ref|XP_003708059.1| PREDICTED: protein twisted gastrulation-like [Megachile rotundata] Back     alignment and taxonomy information
>gi|156538991|ref|XP_001600362.1| PREDICTED: protein twisted gastrulation-like [Nasonia vitripennis] Back     alignment and taxonomy information
>gi|322795178|gb|EFZ18000.1| hypothetical protein SINV_00211 [Solenopsis invicta] Back     alignment and taxonomy information
>gi|307200071|gb|EFN80417.1| Protein twisted gastrulation [Harpegnathos saltator] Back     alignment and taxonomy information
>gi|189235436|ref|XP_001812776.1| PREDICTED: similar to conserved hypothetical protein [Tribolium castaneum] gi|270004290|gb|EFA00738.1| hypothetical protein TcasGA2_TC003620 [Tribolium castaneum] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query107
FB|FBgn0000394 257 cv "crossveinless" [Drosophila 0.476 0.198 0.705 6.5e-19
FB|FBgn0003865 249 tsg "twisted gastrulation" [Dr 0.448 0.192 0.666 2e-17
UNIPROTKB|Q98T89 224 TWSG1 "Twisted gastrulation pr 0.476 0.227 0.566 2.3e-14
ZFIN|ZDB-GENE-010509-2 217 twsg1a "twisted gastrulation h 0.448 0.221 0.58 4.9e-14
MGI|MGI:2137520 222 Twsg1 "twisted gastrulation ho 0.467 0.225 0.557 1e-13
RGD|1311215 222 Twsg1 "twisted gastrulation ho 0.467 0.225 0.557 1e-13
UNIPROTKB|Q0VD44 223 TWSG1 "Uncharacterized protein 0.467 0.224 0.557 1.3e-13
UNIPROTKB|Q9GZX9 223 TWSG1 "Twisted gastrulation pr 0.467 0.224 0.557 1.3e-13
UNIPROTKB|F1SMA0 223 TWSG1 "Uncharacterized protein 0.467 0.224 0.557 1.3e-13
ZFIN|ZDB-GENE-020812-3 222 twsg1b "twisted gastrulation h 0.439 0.211 0.571 2.1e-13
FB|FBgn0000394 cv "crossveinless" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 227 (85.0 bits), Expect = 6.5e-19, P = 6.5e-19
 Identities = 36/51 (70%), Positives = 43/51 (84%)

Query:    48 TSKGCNEAVCASIVSKCMITQSCKCDMKNCTCCKDCLNCLSYLWTECCSCV 98
             T + CNE VCASIVSKCM+TQSCKC++KNC+CCK+CL CL   + ECCSCV
Sbjct:    23 TVESCNEVVCASIVSKCMLTQSCKCELKNCSCCKECLKCLGKNYEECCSCV 73




GO:0048636 "positive regulation of muscle organ development" evidence=IMP
GO:0007630 "jump response" evidence=IMP
FB|FBgn0003865 tsg "twisted gastrulation" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
UNIPROTKB|Q98T89 TWSG1 "Twisted gastrulation protein homolog 1" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-010509-2 twsg1a "twisted gastrulation homolog 1a (Drosophila)" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
MGI|MGI:2137520 Twsg1 "twisted gastrulation homolog 1 (Drosophila)" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|1311215 Twsg1 "twisted gastrulation homolog 1 (Drosophila)" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|Q0VD44 TWSG1 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|Q9GZX9 TWSG1 "Twisted gastrulation protein homolog 1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1SMA0 TWSG1 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-020812-3 twsg1b "twisted gastrulation homolog 1b (Drosophila)" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q98T89TWSG1_CHICKNo assigned EC number0.56860.45790.2187yesN/A
Q9DGH0TWS1A_DANRENo assigned EC number0.56860.45790.2258yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00