Psyllid ID: psy12681

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------17
Protein Sequence
MQAQCRQKNFVSLRQEFNPGLPVCKPSLGFRPMPPESHVDSTLIWFKQDPNNYKYWTNELDNFLEKYRDVTKRPGQGQNIVKCDYGVPRPPGKVCDIDMNRFGPCKKENSYSYGKGTPCIFLKLNKIFNWQPEFYNDTNKLPEKMPNDLKNDIKQSISQNAATYLIYF
Secondary Structure (PSIPRED)
cHHHHHHHHHHHHHHHHcccccccccccEEEccccccccccEEEEEccccccHHHHHHHHHHHHHHHcccccccccccccccccccccccccccEEEEccccccccccccccccccccEEEEEEcccccEEEcccccccccccccHHHHHHHHHHHHccccccEEEEc
Secondary Structure Prediction (SSPRO)
ccEEEEHHccccHHHHccccccccccccEEEcccccccccEEEEEEccccccHHHHHHHHHHHHHHcccccccccccccccccccccccccccEEEEEHHHcccccccccccccccccEEEEEEcEEEccccccccccccccHHccHHHHHHHHHccccccccEEEEc
Coil and Loop (DISEMBL)
MQAQCRQKNFVSLRqefnpglpvckpslgfrpmppeshvdstliwfkqdpnnykYWTNELDNFLEKYRDvtkrpgqgqnivkcdygvprppgkvcdidmnrfgpckkensysygkgtpcIFLKLNKifnwqpefyndtnklpekmpndlkNDIKQSISQNAATYLIYF
Flexible Loop (DISEMBL)
MQAQCRQKNFVSLRQEFNPGLPVCKPSLGFRPMPPESHVDSTLIWFKQDPNNYKYWTNELDNFLEKYRDVtkrpgqgqnivkcdygvprPPGKVCDIDMNRFGPCKKENSYSYGKGTPCIFLKLNKIFNWQPEFYNDTNKLPEKMPNDLKndikqsisqnaatYLIYF
Low Complexity Region (SEG)
MQAQCRQKNFVSLRQEFNPGLPVCKPSLGFRPMPPESHVDSTLIWFKQDPNNYKYWTNELDNFLEKYRDVTKRPGQGQNIVKCDYGVPRPPGKVCDIDMNRFGPCKKENSYSYGKGTPCIFLKLNKIFNWQPEFYNDTNKLPEKMPNDLKNDIKQSISQNAATYLIYF
Disordered region (IsUnstruct)
********************LPVC**************VDSTLIWFKQDPNNYKYWTNELDNFLEKYRDVTKRPGQGQNIVKCDYGVPRPPGKVCDIDMNRFGPCKKENSYSYGKGTPCIFLKLNKIFNWQPEFYND*************************TYLI**
Disordered Region (DISOPRED)
MQAQCRQKNFVSLRQEFNPGLPVCKPSLGFRPMPPESHVDSTLIWFKQDPNNYKYWTNELDNFLEKYRDVTKRPGQ***********PRPPGKVCDIDMNRFGPCKKENSYSYGKGTPCIFLKLNKIFNWQPEFYNDTNKLPEKMPNDLKNDIKQSISQNAATYLIYF
Disordered Region (DISEMBL)
********NFVSLRQEFNPGLPVCKPSLGFRPMPPESHVDSTLIWFKQDPNNYKYWTNELDNFLEKYRDVTKRPGQGQNIVKCDYGVPRPPGKVCDIDMNRFGPCKKENSYSYGKGTPCIFLKLNKIFNWQPEFYNDTNKLPEKMPNDLKNDIKQSISQNAATYLIYF
Disordered Region (DISPRO)
MQAQCRQKNFVSLRQEFNPGLPVCKPSLGFRPMPPESHVDSTLIWFKQDPNNYKYWTNELDNFLEKYRDVTKRP*QGQNIVKCDYGVPRPPGKVCDIDMNRFGPCKKENSYSYGKGTPCIFLKLNKIFNWQPEFYNDTNKLPEKMPNDLKNDIKQSISQNAATYLIYF
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MQAQCRQKNFVSLRQEFNPGLPVCKPSLGFRPMPPESHVDSTLIWFKQDPNNYKYWTNELDNFLEKYRDVTKRPGQGQNIVKCDYGVPRPPGKVCDIDMNRFGPCKKENSYSYGKGTPCIFLKLNKIFNWQPEFYNDTNKLPEKMPNDLKNDIKQSISQNAATYLIYF
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	168	2.2.26 [Sep-21-2011]
Q24048	323	Sodium/potassium-transpor	no	N/A	0.773	0.402	0.557	1e-37
P25169	315	Sodium/potassium-transpor	N/A	N/A	0.773	0.412	0.448	4e-26
Q24046	309	Sodium/potassium-transpor	no	N/A	0.75	0.407	0.365	7e-20
Q9XUY5	317	Probable sodium/potassium	yes	N/A	0.714	0.378	0.307	4e-08
P33879	280	Sodium/potassium-transpor	yes	N/A	0.565	0.339	0.309	7e-07
Q9JM72	306	Sodium/potassium-transpor	yes	N/A	0.755	0.415	0.272	8e-07
P05028	303	Sodium/potassium-transpor	N/A	N/A	0.755	0.419	0.258	2e-06
Q93235	320	Sodium/potassium-transpor	no	N/A	0.714	0.375	0.284	2e-06
P05026	303	Sodium/potassium-transpor	yes	N/A	0.755	0.419	0.272	3e-06
Q5R8S8	303	Sodium/potassium-transpor	yes	N/A	0.755	0.419	0.272	3e-06

>sp|Q24048|ATPB2_DROME Sodium/potassium-transporting ATPase subunit beta-2 OS=Drosophila melanogaster GN=nrv2 PE=1 SV=2

 Score =  155 bits (392), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 73/131 (55%), Positives = 92/131 (70%), Gaps = 1/131 (0%)

Query: 26  PSLGFRPMPPESHVDSTLIWFKQDPN-NYKYWTNELDNFLEKYRDVTKRPGQGQNIVKCD 84
           P LGFRP+PP  +V+STLIW+K   + NYK+WT+ LD+FL  Y+     PG+GQNI  CD
Sbjct: 95  PGLGFRPLPPVDNVESTLIWYKGTQHENYKHWTDSLDDFLAVYKVPGLTPGRGQNIYNCD 154

Query: 85  YGVPRPPGKVCDIDMNRFGPCKKENSYSYGKGTPCIFLKLNKIFNWQPEFYNDTNKLPEK 144
           Y  P P G+VCD+D+  + PC KEN+YSY K  PCIFLKLNKI+ W PE+YN +N LP  
Sbjct: 155 YNQPPPKGQVCDVDIKTWSPCTKENNYSYHKSAPCIFLKLNKIYGWIPEYYNRSNDLPAN 214

Query: 145 MPNDLKNDIKQ 155
           MP  LK  I +
Sbjct: 215 MPASLKTYIAE 225

This is the non-catalytic component of the active enzyme, which catalyzes the hydrolysis of ATP coupled with the exchange of Na(+) and K(+) ions across the plasma membrane. The beta subunit regulates, through assembly of alpha/beta heterodimers, the number of sodium pumps transported to the plasma membrane.
Drosophila melanogaster (taxid: 7227)

>sp|P25169|AT1B1_ARTSF Sodium/potassium-transporting ATPase subunit beta OS=Artemia franciscana PE=2 SV=1

 Score =  117 bits (292), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 61/136 (44%), Positives = 80/136 (58%), Gaps = 6/136 (4%)

Query: 21  LPVCKPSLGFRPMPPESHVDSTLIWFKQD-PNNYKYWTNELDNFLEKYRDVTKRPGQGQN 79
           L    P LGFRPMPPE+ VDSTLI FK     +++YW + L  FLE Y  +T     GQ 
Sbjct: 85  LIGANPGLGFRPMPPEAQVDSTLIQFKHGIKGDWQYWVHSLTEFLEPYETLTS---SGQE 141

Query: 80  IVKCDYGVPRPPGKVCDIDMNRFG-PCKKENSYSYGKGTPCIFLKLNKIFNWQPEFYNDT 138
              CD+  P   GK C+ ++   G  C KEN++ Y  G PC+ +KL   F W+PE YN +
Sbjct: 142 FTNCDFDKPPQEGKACNFNVELLGDHCTKENNFGYELGKPCVLIKLTD-FGWRPEVYNSS 200

Query: 139 NKLPEKMPNDLKNDIK 154
            ++PE MP DLK+ IK
Sbjct: 201 AEVPEDMPADLKSYIK 216

This is the non-catalytic component of the active enzyme, which catalyzes the hydrolysis of ATP coupled with the exchange of Na(+) and K(+) ions across the plasma membrane. The beta subunit regulates, through assembly of alpha/beta heterodimers, the number of sodium pumps transported to the plasma membrane.

Artemia franciscana (taxid: 6661)

>sp|Q24046|ATPB1_DROME Sodium/potassium-transporting ATPase subunit beta-1 OS=Drosophila melanogaster GN=nrv1 PE=1 SV=2

 Score = 96.7 bits (239), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 49/134 (36%), Positives = 72/134 (53%), Gaps = 8/134 (5%)

Query: 26  PSLGFRPMPPESHVDSTLIWFKQDPNNYKYWTNELDNFLEKYRDVTKRPGQGQNIVKCDY 85
           P LGFRP+  ++   S + +  + P    YW   +D+FL  Y        +G+++  C +
Sbjct: 91  PGLGFRPLSEQTERGSVIAFDGKKPAESDYWIELIDDFLRDYNHT-----EGRDMKHCGF 145

Query: 86  GVPRPPGKVCDIDMNRFGPCKKENSYSYGKGTPCIFLKLNKIFNWQPEFYNDTNKLPEKM 145
           G    P  VC ++ + FG C K N+Y Y    PCIFLKLNKIF W PE Y+   K    M
Sbjct: 146 GQVLEPTDVCVVNTDLFGGCSKANNYGYKTNQPCIFLKLNKIFGWIPEVYDKEEK---DM 202

Query: 146 PNDLKNDIKQSISQ 159
           P+DLK  I ++ ++
Sbjct: 203 PDDLKKVINETKTE 216

This is the non-catalytic component of the active enzyme, which catalyzes the hydrolysis of ATP coupled with the exchange of Na(+) and K(+) ions across the plasma membrane. The beta subunit regulates, through assembly of alpha/beta heterodimers, the number of sodium pumps transported to the plasma membrane.

Drosophila melanogaster (taxid: 7227)

>sp|Q9XUY5|AT1B3_CAEEL Probable sodium/potassium-transporting ATPase subunit beta-3 OS=Caenorhabditis elegans GN=nkb-3 PE=3 SV=1

 Score = 57.4 bits (137), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 40/130 (30%), Positives = 66/130 (50%), Gaps = 10/130 (7%)

Query: 26  PSLGFRPMPPESHVDSTLIWFK-QDPNNYKYWTNELDNFLEKYRDV--TKRPGQGQNIVK 82
           P +G++P   E+  DSTLI F  QD  +++ +  +LDN+L KY++   T+  G   N   
Sbjct: 93  PGVGYQPWLKENP-DSTLIKFNLQDSKSWEPYVKQLDNYLSKYKNTNETRDCGASDNNDA 151

Query: 83  CDYGVPRPPGKVCDIDMNRF--GPCKKENSYSYGKGTPCIFLKLNKIFNWQPEFYNDTNK 140
            +      P   C  D+  F    C  ++ Y Y  G PC+ + LN++  W+P  Y+D   
Sbjct: 152 LETDTDTFP---CRFDLGLFEKANCGAKDQYGYKSGKPCVAVSLNRLIGWRPVNYDD-GS 207

Query: 141 LPEKMPNDLK 150
           +PE++    K
Sbjct: 208 VPEEIKGRYK 217

This is the non-catalytic component of the active enzyme, which catalyzes the hydrolysis of ATP coupled with the exchange of Na(+) and K(+) ions across the plasma membrane. The beta subunit regulates, through assembly of alpha/beta heterodimers, the number of sodium pumps transported to the plasma membrane (By similarity). Implicated in genomic response to various soil bacteria that affects fitness, lifespan and brood size.

Caenorhabditis elegans (taxid: 6239)

>sp|P33879|AT1B3_CHICK Sodium/potassium-transporting ATPase subunit beta-3 OS=Gallus gallus GN=ATP1B3 PE=2 SV=1

 Score = 53.5 bits (127), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 39/126 (30%), Positives = 58/126 (46%), Gaps = 31/126 (24%)

Query: 23  VCKPSLGFRPMPPESHVDSTLIWF--KQDPNNYKYWTNELDNFLEKYRDVTKRPGQGQNI 80
           +  P L   P P     D+ L ++  K D  +Y  + + L  FLE Y D      Q QNI
Sbjct: 76  ISSPGLMISPKP-----DTALEFYFNKSDAQSYAEYVSTLRKFLETYDD----SKQSQNI 126

Query: 81  VKCDYGVPRPPGKV-----------CDIDMNRFGPC--KKENSYSYGKGTPCIFLKLNKI 127
             C       PGKV           C  +++  G C  K++ ++ Y KGTPC+ +K+N+I
Sbjct: 127 -NC------TPGKVFDQNDVAVKKACRFNLSELGQCSGKEDKTFGYSKGTPCVLVKMNRI 179

Query: 128 FNWQPE 133
              +PE
Sbjct: 180 IGLKPE 185

This is the non-catalytic component of the active enzyme, which catalyzes the hydrolysis of ATP coupled with the exchange of Na(+) and K(+) ions across the plasma membrane. The exact function of the beta-3 subunit is not known.

Gallus gallus (taxid: 9031)

>sp|Q9JM72|AT1B1_CAVPO Sodium/potassium-transporting ATPase subunit beta-1 OS=Cavia porcellus GN=ATP1B1 PE=2 SV=1

 Score = 53.1 bits (126), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 40/147 (27%), Positives = 64/147 (43%), Gaps = 20/147 (13%)

Query: 5   CRQKNFVSLRQEFNPGLPVCKPSLGFRPMPPES----HVDSTLIWFK-QDPNNYKYWTNE 59
           C    F+   Q     +   KP+   R  PP       +  T I F+  DP +Y+ +   
Sbjct: 45  CLAGIFIGTIQVMLLTISELKPTYQDRVAPPGLTQIPQIQKTEISFRPADPKSYEAYVLN 104

Query: 60  LDNFLEKYRDVTKR-----------PGQGQNIVKCDYGVPRPPGKVCDIDMNRFGPCKKE 108
           +  FLEKY+D  ++           P + +   + D+   R   KVC   +   G C  +
Sbjct: 105 IYRFLEKYKDAAQKDDMIFEDCSTVPSEPKE--RGDFNHERGERKVCRFKLEWLGNCSGQ 162

Query: 109 N--SYSYGKGTPCIFLKLNKIFNWQPE 133
           N  SY Y  G PCI +KLN++  ++P+
Sbjct: 163 NDDSYGYRDGKPCIIIKLNRVLGFKPK 189

This is the non-catalytic component of the active enzyme, which catalyzes the hydrolysis of ATP coupled with the exchange of Na(+) and K(+) ions across the plasma membrane. The beta subunit regulates, through assembly of alpha/beta heterodimers, the number of sodium pumps transported to the plasma membrane.

Cavia porcellus (taxid: 10141)

>sp|P05028|AT1B1_SHEEP Sodium/potassium-transporting ATPase subunit beta-1 OS=Ovis aries GN=ATP1B1 PE=2 SV=1

 Score = 52.0 bits (123), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/147 (25%), Positives = 67/147 (45%), Gaps = 20/147 (13%)

Query: 5   CRQKNFVSLRQEFNPGLPVCKPSLGFRPMPPES----HVDSTLIWFK-QDPNNYKYWTNE 59
           C    F+   Q     +   KP+   R  PP       +  T I F+  DP +Y  + + 
Sbjct: 45  CLAGIFIGTIQVMLLTISEFKPTYQDRVAPPGLTQIPQIQKTEIAFRPNDPKSYMTYVDN 104

Query: 60  LDNFLEKYRDVTKR-----------PGQGQNIVKCDYGVPRPPGKVCDIDMNRFGPCKKE 108
           +DNFL+KYRD  ++           P + ++  + ++   +   KVC   +   G C   
Sbjct: 105 IDNFLKKYRDSAQKDDMIFEDCGNVPSELKD--RGEFNNEQGERKVCRFKLEWLGNCSGI 162

Query: 109 N--SYSYGKGTPCIFLKLNKIFNWQPE 133
           N  +Y Y +G PC+ +KLN++  ++P+
Sbjct: 163 NDETYGYKEGKPCVIIKLNRVLGFKPK 189

This is the non-catalytic component of the active enzyme, which catalyzes the hydrolysis of ATP coupled with the exchange of Na(+) and K(+) ions across the plasma membrane. The beta subunit regulates, through assembly of alpha/beta heterodimers, the number of sodium pumps transported to the plasma membrane.

Ovis aries (taxid: 9940)

>sp|Q93235|AT1B1_CAEEL Sodium/potassium-transporting ATPase subunit beta-1 OS=Caenorhabditis elegans GN=nkb-1 PE=1 SV=1

 Score = 52.0 bits (123), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 65/130 (50%), Gaps = 10/130 (7%)

Query: 26  PSLGFRPMPPESHVDSTLIWFK-QDPNNYKYWTNELDNFLEKY---RDVTKRPGQGQNIV 81
           P +G++P   E   DSTLI +  +D  +YK +  ++  +L KY      T+  G G +  
Sbjct: 96  PGVGYQPWLKE-RPDSTLIKYNLRDQKSYKAYLEQMKTYLTKYDSNATETRECGAGDS-- 152

Query: 82  KCDYGVPRPPGKVCDIDMNRFGP-CKKENSYSYGKGTPCIFLKLNKIFNWQPEFYNDTNK 140
             D     P    C  D++ F   C +++ + Y  G PC+ + LN++  W+P  Y + N 
Sbjct: 153 -NDDLEKNPDALPCRFDLSVFDKGCSEKSDFGYKSGKPCVIISLNRLIGWRPTDYQE-NS 210

Query: 141 LPEKMPNDLK 150
           +PE++ +  K
Sbjct: 211 VPEEVKDRYK 220

Non-catalytic component of the active enzyme, which catalyzes the hydrolysis of ATP coupled with the exchange of Na(+) and K(+) ions across the plasma membrane. The beta subunit regulates, through assembly of alpha/beta heterodimers, the number of sodium pumps transported to the plasma membrane (By similarity). May also may function in the peptidic vesicle transport pathway from the endoplasmic reticulum for the defecation behaviors.

Caenorhabditis elegans (taxid: 6239)

>sp|P05026|AT1B1_HUMAN Sodium/potassium-transporting ATPase subunit beta-1 OS=Homo sapiens GN=ATP1B1 PE=1 SV=1

 Score = 51.6 bits (122), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 40/147 (27%), Positives = 64/147 (43%), Gaps = 20/147 (13%)

Query: 5   CRQKNFVSLRQEFNPGLPVCKPSLGFRPMPPES----HVDSTLIWFK-QDPNNYKYWTNE 59
           C    F+   Q     +   KP+   R  PP       +  T I F+  DP +Y+ +   
Sbjct: 45  CLAGIFIGTIQVMLLTISEFKPTYQDRVAPPGLTQIPQIQKTEISFRPNDPKSYEAYVLN 104

Query: 60  LDNFLEKYRDVTKR-----------PGQGQNIVKCDYGVPRPPGKVCDIDMNRFGPCKKE 108
           +  FLEKY+D  +R           P + +   + D+   R   KVC   +   G C   
Sbjct: 105 IVRFLEKYKDSAQRDDMIFEDCGDVPSEPKE--RGDFNHERGERKVCRFKLEWLGNCSGL 162

Query: 109 N--SYSYGKGTPCIFLKLNKIFNWQPE 133
           N  +Y Y +G PCI +KLN++  ++P+
Sbjct: 163 NDETYGYKEGKPCIIIKLNRVLGFKPK 189

This is the non-catalytic component of the active enzyme, which catalyzes the hydrolysis of ATP coupled with the exchange of Na(+) and K(+) ions across the plasma membrane. The beta subunit regulates, through assembly of alpha/beta heterodimers, the number of sodium pumps transported to the plasma membrane.

Homo sapiens (taxid: 9606)

>sp|Q5R8S8|AT1B1_PONAB Sodium/potassium-transporting ATPase subunit beta-1 OS=Pongo abelii GN=ATP1B1 PE=2 SV=1

 Score = 51.6 bits (122), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 40/147 (27%), Positives = 64/147 (43%), Gaps = 20/147 (13%)

Query: 5   CRQKNFVSLRQEFNPGLPVCKPSLGFRPMPPES----HVDSTLIWFK-QDPNNYKYWTNE 59
           C    F+   Q     +   KP+   R  PP       +  T I F+  DP +Y+ +   
Sbjct: 45  CLAGIFIGTIQVMLLTISEFKPTYQDRVAPPGLTQIPQIQKTEISFRPNDPKSYEAYVLN 104

Query: 60  LDNFLEKYRDVTKR-----------PGQGQNIVKCDYGVPRPPGKVCDIDMNRFGPCKKE 108
           +  FLEKY+D  +R           P + +   + D+   R   KVC   +   G C   
Sbjct: 105 IVRFLEKYKDSAQRDDMIFEDCGDVPSEPKE--RGDFNHERGERKVCRFKLEWLGNCSGL 162

Query: 109 N--SYSYGKGTPCIFLKLNKIFNWQPE 133
           N  +Y Y +G PCI +KLN++  ++P+
Sbjct: 163 NDETYGYKEGKPCIIIKLNRVLGFKPK 189

This is the non-catalytic component of the active enzyme, which catalyzes the hydrolysis of ATP coupled with the exchange of Na(+) and K(+) ions across the plasma membrane. The beta subunit regulates, through assembly of alpha/beta heterodimers, the number of sodium pumps transported to the plasma membrane.

Pongo abelii (taxid: 9601)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	168
332024991	312	Sodium/potassium-transporting ATPase sub	0.785	0.423	0.580	5e-39
158297493	323	AGAP007791-PA [Anopheles gambiae str. PE	0.845	0.439	0.531	3e-38
383858822	324	PREDICTED: sodium/potassium-transporting	0.809	0.419	0.569	4e-38
322787042	314	hypothetical protein SINV_11685 [Solenop	0.779	0.417	0.575	4e-38
357618867	326	putative Sodium/potassium-transporting A	0.827	0.426	0.514	5e-38
312370874	402	hypothetical protein AND_22940 [Anophele	0.767	0.320	0.576	7e-38
195115459	323	GI17298 [Drosophila mojavensis] gi|19391	0.922	0.479	0.484	1e-37
48095204	315	PREDICTED: sodium/potassium-transporting	0.803	0.428	0.558	1e-37
383861697	314	PREDICTED: sodium/potassium-transporting	0.803	0.429	0.558	2e-37
307193345	315	Sodium/potassium-transporting ATPase sub	0.779	0.415	0.571	2e-37

>gi|332024991|gb|EGI65178.1| Sodium/potassium-transporting ATPase subunit beta-2 [Acromyrmex echinatior]

 Score =  165 bits (418), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 79/136 (58%), Positives = 94/136 (69%), Gaps = 4/136 (2%)

Query: 26  PSLGFRPMPPESHVDSTLIWFK-QDPNNYKYWTNELDNFLEKYRDVTKRPGQGQNIVKCD 84
           P LGFRPMPPES+V+STLIW+K  D  NY +WT ELD FLE+Y+   + PG     V CD
Sbjct: 89  PGLGFRPMPPESNVESTLIWYKASDEGNYLHWTRELDKFLEEYQ---RSPGANYERVNCD 145

Query: 85  YGVPRPPGKVCDIDMNRFGPCKKENSYSYGKGTPCIFLKLNKIFNWQPEFYNDTNKLPEK 144
           YG P PPGKVCD+DM  +G C K N Y + +  PCIFLKLNKIF W+P+FYN+T  LP  
Sbjct: 146 YGRPAPPGKVCDVDMASWGQCTKLNKYGFSRSAPCIFLKLNKIFGWEPKFYNNTKDLPAL 205

Query: 145 MPNDLKNDIKQSISQN 160
           MP DLK  I+Q    N
Sbjct: 206 MPADLKEHIRQEEKAN 221

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|158297493|ref|XP_317717.3| AGAP007791-PA [Anopheles gambiae str. PEST] gi|157015222|gb|EAA12801.3| AGAP007791-PA [Anopheles gambiae str. PEST]

 Score =  162 bits (411), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 76/143 (53%), Positives = 99/143 (69%), Gaps = 1/143 (0%)

Query: 14  RQEFNPGLPVCKPSLGFRPMPPESHVDSTLIWFK-QDPNNYKYWTNELDNFLEKYRDVTK 72
           + + +  L    P LGFRP+P E +V+STLIW+K  D  NYK WT+ LD+FL+ YR   +
Sbjct: 83  KWQMDQSLIGTNPGLGFRPLPSEDNVESTLIWYKGTDEKNYKMWTDALDDFLQDYRTPGQ 142

Query: 73  RPGQGQNIVKCDYGVPRPPGKVCDIDMNRFGPCKKENSYSYGKGTPCIFLKLNKIFNWQP 132
             G+GQNI  CDY  P P G VCD+D+ ++GPC  EN Y+Y K  PCIFLKLNKI+ W P
Sbjct: 143 VSGRGQNIYNCDYNQPPPKGMVCDVDIKQYGPCTLENHYNYHKSAPCIFLKLNKIYGWVP 202

Query: 133 EFYNDTNKLPEKMPNDLKNDIKQ 155
           EFYN+++ LP  MP DLK+ IK+
Sbjct: 203 EFYNESSSLPSNMPTDLKDYIKE 225

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383858822|ref|XP_003704898.1| PREDICTED: sodium/potassium-transporting ATPase subunit beta-2-like [Megachile rotundata]

 Score =  162 bits (410), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 78/137 (56%), Positives = 93/137 (67%), Gaps = 1/137 (0%)

Query: 26  PSLGFRPMPPESHVDSTLIWFK-QDPNNYKYWTNELDNFLEKYRDVTKRPGQGQNIVKCD 84
           P LGFRP PP  +V+STLIW++  D  NYKYW + L  FL+ Y      PG G NI KCD
Sbjct: 96  PGLGFRPQPPLENVESTLIWYRGTDSENYKYWVDSLQAFLKDYITPGSIPGLGANINKCD 155

Query: 85  YGVPRPPGKVCDIDMNRFGPCKKENSYSYGKGTPCIFLKLNKIFNWQPEFYNDTNKLPEK 144
           Y  P PPGKVCD+D+  + PC KEN Y+Y K  PCIFLKLNKI+ W+PEFYNDT  LPEK
Sbjct: 156 YNQPPPPGKVCDVDVKNWNPCTKENQYNYHKSAPCIFLKLNKIYGWRPEFYNDTESLPEK 215

Query: 145 MPNDLKNDIKQSISQNA 161
           MP +LK  I    + N+
Sbjct: 216 MPLELKKHILSVKANNS 232

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322787042|gb|EFZ13266.1| hypothetical protein SINV_11685 [Solenopsis invicta]

 Score =  162 bits (410), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 80/139 (57%), Positives = 96/139 (69%), Gaps = 8/139 (5%)

Query: 26  PSLGFRPMPPESHVDSTLIWFK-QDPNNYKYWTNELDNFLEKYRDVTKRPGQGQN---IV 81
           P LGFRPMPPES+V+STLIW+K  D  NY +WT ELD FLE Y    ++P  G N    V
Sbjct: 89  PGLGFRPMPPESNVESTLIWYKASDEGNYLHWTRELDRFLEDY----QKPPSGTNNYERV 144

Query: 82  KCDYGVPRPPGKVCDIDMNRFGPCKKENSYSYGKGTPCIFLKLNKIFNWQPEFYNDTNKL 141
            CDYG P PPGKVCD+++N +G C K+N Y + +  PCIFLKLNKIF W+P+FYNDT  L
Sbjct: 145 ICDYGRPAPPGKVCDVNLNTWGQCTKDNKYGFSRSAPCIFLKLNKIFGWEPKFYNDTKNL 204

Query: 142 PEKMPNDLKNDIKQSISQN 160
           P  MP DLK  I+Q    N
Sbjct: 205 PALMPADLKEHIRQEEKSN 223

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|357618867|gb|EHJ71674.1| putative Sodium/potassium-transporting ATPase subunit beta-2 [Danaus plexippus]

 Score =  162 bits (410), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 73/142 (51%), Positives = 99/142 (69%), Gaps = 3/142 (2%)

Query: 14  RQEFNPGLPVCKPSLGFRPMPPESHVDSTLIWFK-QDPNNYKYWTNELDNFLEKYRDVTK 72
           R +    +    P LGFRPMPPE  V S++IW++  DP +Y++W  EL +FL+ Y+    
Sbjct: 88  RWQLEGSIIGTNPGLGFRPMPPE--VSSSVIWYRGNDPGSYQFWVQELQHFLKTYKRDGH 145

Query: 73  RPGQGQNIVKCDYGVPRPPGKVCDIDMNRFGPCKKENSYSYGKGTPCIFLKLNKIFNWQP 132
           R G GQNI  CD+ +P P GKVCD+D+N +GPC  EN ++Y K TPC+FLKLNKI+ W+P
Sbjct: 146 RSGAGQNIHNCDFKLPPPAGKVCDVDVNSWGPCVDENGFAYHKSTPCVFLKLNKIYGWKP 205

Query: 133 EFYNDTNKLPEKMPNDLKNDIK 154
           EFYN ++ LPE MP+DLK  I+
Sbjct: 206 EFYNSSDTLPESMPDDLKEHIR 227

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|312370874|gb|EFR19182.1| hypothetical protein AND_22940 [Anopheles darlingi]

 Score =  161 bits (408), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 75/130 (57%), Positives = 92/130 (70%), Gaps = 1/130 (0%)

Query: 26  PSLGFRPMPPESHVDSTLIWFK-QDPNNYKYWTNELDNFLEKYRDVTKRPGQGQNIVKCD 84
           P LGFRP+P E +V+STLIW++  +  NYK WT+ LD FLE YR   +  G+GQNI  CD
Sbjct: 169 PGLGFRPLPSEDNVESTLIWYQGTEEKNYKMWTDALDKFLEDYRTPGQVSGRGQNIYNCD 228

Query: 85  YGVPRPPGKVCDIDMNRFGPCKKENSYSYGKGTPCIFLKLNKIFNWQPEFYNDTNKLPEK 144
           Y  P P G VCD+D+ ++GPC  EN Y+Y K  PCIFLKLNKI+ W PEFYN++N LP  
Sbjct: 229 YNQPPPKGMVCDVDIKQYGPCTLENHYNYHKSAPCIFLKLNKIYGWVPEFYNESNSLPGN 288

Query: 145 MPNDLKNDIK 154
           MP DLK  IK
Sbjct: 289 MPTDLKEYIK 298

Source: Anopheles darlingi

Species: Anopheles darlingi

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195115459|ref|XP_002002274.1| GI17298 [Drosophila mojavensis] gi|193912849|gb|EDW11716.1| GI17298 [Drosophila mojavensis]

 Score =  161 bits (407), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 78/161 (48%), Positives = 106/161 (65%), Gaps = 6/161 (3%)

Query: 1   MQAQCRQKNFVSL-----RQEFNPGLPVCKPSLGFRPMPPESHVDSTLIWFKQDP-NNYK 54
           + A C    F++L     + +    +    P LGFRP+PP  +V+STLIW+K     NYK
Sbjct: 65  LVAICMWAFFLTLDPRIPKWKLESSIIGTNPGLGFRPLPPVDNVESTLIWYKGTQYENYK 124

Query: 55  YWTNELDNFLEKYRDVTKRPGQGQNIVKCDYGVPRPPGKVCDIDMNRFGPCKKENSYSYG 114
           +WT+ LD FLE Y+     PG+GQNI  CDY  P P G+VCD+D+  + PC KEN+YSY 
Sbjct: 125 HWTDSLDEFLEVYKVPGLTPGRGQNIYNCDYNQPPPRGQVCDVDIKSWAPCTKENNYSYH 184

Query: 115 KGTPCIFLKLNKIFNWQPEFYNDTNKLPEKMPNDLKNDIKQ 155
           K +PCIFLKLNKI++W+P+FYN++  LP  MP+ LKN I +
Sbjct: 185 KSSPCIFLKLNKIYDWRPDFYNNSQTLPADMPSSLKNHISE 225

Source: Drosophila mojavensis

Species: Drosophila mojavensis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|48095204|ref|XP_392257.1| PREDICTED: sodium/potassium-transporting ATPase subunit beta-2-like [Apis mellifera]

 Score =  161 bits (407), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 76/136 (55%), Positives = 90/136 (66%), Gaps = 1/136 (0%)

Query: 26  PSLGFRPMPPESHVDSTLIWFK-QDPNNYKYWTNELDNFLEKYRDVTKRPGQGQNIVKCD 84
           P LGFRPMPP S+V+STLIW+K  D  N+ +WT ELD FLE+Y+         Q    CD
Sbjct: 89  PGLGFRPMPPSSNVESTLIWYKASDEGNFLHWTRELDKFLEEYQKPASSTNGAQKRTICD 148

Query: 85  YGVPRPPGKVCDIDMNRFGPCKKENSYSYGKGTPCIFLKLNKIFNWQPEFYNDTNKLPEK 144
           YG P  PGKVCD+DM+ +G C K+N Y Y K  PCIFLKLNKIF W+PE+YNDT  LP  
Sbjct: 149 YGKPPAPGKVCDVDMSTWGQCTKKNKYGYNKSAPCIFLKLNKIFGWKPEYYNDTKNLPST 208

Query: 145 MPNDLKNDIKQSISQN 160
           MP DL+  IK     N
Sbjct: 209 MPADLQEHIKAEEHAN 224

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383861697|ref|XP_003706321.1| PREDICTED: sodium/potassium-transporting ATPase subunit beta-2-like [Megachile rotundata]

 Score =  160 bits (405), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 76/136 (55%), Positives = 94/136 (69%), Gaps = 1/136 (0%)

Query: 26  PSLGFRPMPPESHVDSTLIWFK-QDPNNYKYWTNELDNFLEKYRDVTKRPGQGQNIVKCD 84
           P LGFRPMPP S+V+STLIW+K  D  N+ +WT ELD FLE+Y+  +      Q  + CD
Sbjct: 88  PGLGFRPMPPSSNVESTLIWYKASDEGNFLHWTRELDAFLEEYQKPSGGTNGAQQRMLCD 147

Query: 85  YGVPRPPGKVCDIDMNRFGPCKKENSYSYGKGTPCIFLKLNKIFNWQPEFYNDTNKLPEK 144
           YG P  PGKVCD+DM ++  C KEN Y Y K  PCIFLKLNKIF W+PE+YNDT+ LP  
Sbjct: 148 YGKPPTPGKVCDVDMTQWRHCTKENKYGYNKSAPCIFLKLNKIFGWKPEYYNDTSNLPRD 207

Query: 145 MPNDLKNDIKQSISQN 160
           MP +L++ IKQ    N
Sbjct: 208 MPAELQDHIKQEALSN 223

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307193345|gb|EFN76207.1| Sodium/potassium-transporting ATPase subunit beta-2 [Harpegnathos saltator]

 Score =  160 bits (405), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 80/140 (57%), Positives = 94/140 (67%), Gaps = 9/140 (6%)

Query: 26  PSLGFRPMPPESHVDSTLIWFK-QDPNNYKYWTNELDNFLEKYRDVTKRPGQGQN----I 80
           P LGFRPMPPES+V+STLIW+K  D  NY +WT ELD FLE+Y    +RP  G N     
Sbjct: 89  PGLGFRPMPPESNVESTLIWYKASDEGNYLHWTRELDKFLEEY----QRPASGTNGYEHR 144

Query: 81  VKCDYGVPRPPGKVCDIDMNRFGPCKKENSYSYGKGTPCIFLKLNKIFNWQPEFYNDTNK 140
           + CDYG   P GKVCD++M  +G C KEN Y + K  PCIFLKLNKIF W+P FYNDT  
Sbjct: 145 MNCDYGKAPPAGKVCDVNMATWGKCTKENKYGFSKSAPCIFLKLNKIFGWKPHFYNDTKN 204

Query: 141 LPEKMPNDLKNDIKQSISQN 160
           LP  MP DL++ IKQ  S  
Sbjct: 205 LPSSMPVDLQDHIKQEESAG 224

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	168
FB|FBgn0015777	323	nrv2 "nervana 2" [Drosophila m	0.773	0.402	0.557	6.1e-39
FB|FBgn0032946	311	nrv3 "nervana 3" [Drosophila m	0.809	0.437	0.493	8.3e-35
FB|FBgn0015776	309	nrv1 "nervana 1" [Drosophila m	0.732	0.398	0.374	2.7e-20
WB|WBGene00010117	317	nkb-3 [Caenorhabditis elegans	0.714	0.378	0.307	8.7e-12
WB|WBGene00007646	320	nkb-1 [Caenorhabditis elegans	0.714	0.375	0.276	1.2e-10
UNIPROTKB|P33879	280	ATP1B3 "Sodium/potassium-trans	0.654	0.392	0.310	1.1e-08
UNIPROTKB|G3MWR4	303	ATP1B1 "Uncharacterized protei	0.642	0.356	0.301	1.7e-08
MGI|MGI:107788	278	Atp1b3 "ATPase, Na+/K+ transpo	0.75	0.453	0.258	3.7e-08
UNIPROTKB|B7Z9S8	247	ATP1B1 "Sodium/potassium-trans	0.648	0.441	0.28	4.4e-08
UNIPROTKB|A6NGH2	295	ATP1B1 "Sodium/potassium-trans	0.648	0.369	0.28	7.3e-08

FB|FBgn0015777 nrv2 "nervana 2" [Drosophila melanogaster (taxid:7227)]

 Score = 416 (151.5 bits), Expect = 6.1e-39, P = 6.1e-39
 Identities = 73/131 (55%), Positives = 92/131 (70%)

Query:    26 PSLGFRPMPPESHVDSTLIWFKQDPN-NYKYWTNELDNFLEKYRDVTKRPGQGQNIVKCD 84
             P LGFRP+PP  +V+STLIW+K   + NYK+WT+ LD+FL  Y+     PG+GQNI  CD
Sbjct:    95 PGLGFRPLPPVDNVESTLIWYKGTQHENYKHWTDSLDDFLAVYKVPGLTPGRGQNIYNCD 154

Query:    85 YGVPRPPGKVCDIDMNRFGPCKKENSYSYGKGTPCIFLKLNKIFNWQPEFYNDTNKLPEK 144
             Y  P P G+VCD+D+  + PC KEN+YSY K  PCIFLKLNKI+ W PE+YN +N LP  
Sbjct:   155 YNQPPPKGQVCDVDIKTWSPCTKENNYSYHKSAPCIFLKLNKIYGWIPEYYNRSNDLPAN 214

Query:   145 MPNDLKNDIKQ 155
             MP  LK  I +
Sbjct:   215 MPASLKTYIAE 225

GO:0005886 "plasma membrane" evidence=ISS;IDA

GO:0005391 "sodium:potassium-exchanging ATPase activity" evidence=ISS;NAS;IMP

GO:0005890 "sodium:potassium-exchanging ATPase complex" evidence=IC;ISS

GO:0008324 "cation transmembrane transporter activity" evidence=IDA

GO:0006812 "cation transport" evidence=IDA

GO:0007424 "open tracheal system development" evidence=IMP

GO:0035151 "regulation of tube size, open tracheal system" evidence=IMP

GO:0005918 "septate junction" evidence=IDA

GO:0035158 "regulation of tube diameter, open tracheal system" evidence=IMP

GO:0035159 "regulation of tube length, open tracheal system" evidence=IMP

GO:0019991 "septate junction assembly" evidence=IMP

GO:0006814 "sodium ion transport" evidence=IEA

GO:0006813 "potassium ion transport" evidence=IEA

GO:0060857 "establishment of glial blood-brain barrier" evidence=IMP

FB|FBgn0032946 nrv3 "nervana 3" [Drosophila melanogaster (taxid:7227)]

 Score = 377 (137.8 bits), Expect = 8.3e-35, P = 8.3e-35
 Identities = 71/144 (49%), Positives = 92/144 (63%)

Query:    20 GLPVCKPSLGFRPMPPESHVDSTLIWFKQDP-NNYKYWTNELDNFLEKYRDVTKRPGQGQ 78
             GL    P LGFRPMPPE++V+STL+W++    +NYKYW +E   FL+ Y+D+ K     Q
Sbjct:    83 GLIGSNPGLGFRPMPPEANVESTLVWYESSKKDNYKYWVDETSRFLKSYQDLEK-----Q 137

Query:    79 NIVKCDYGVPRPPGKVCDIDMNRFGPCKKENSYSYGKGTPCIFLKLNKIFNWQPEFYNDT 138
             N V C +  P    KVC ID + F PC  +N++ Y    PCIFLKLNKI+NW PE YND+
Sbjct:   138 NQVNCSFEHPPQDDKVCGIDFSSFSPCTADNNFGYHVARPCIFLKLNKIYNWIPEIYNDS 197

Query:   139 NKLPEKMPNDLKNDIK--QSISQN 160
               LP+ MP +LK  IK  QS+  N
Sbjct:   198 KTLPDHMPEELKQHIKEKQSLRPN 221

GO:0005886 "plasma membrane" evidence=IDA;NAS

GO:0005890 "sodium:potassium-exchanging ATPase complex" evidence=IEA;NAS

GO:0005391 "sodium:potassium-exchanging ATPase activity" evidence=NAS

GO:0006814 "sodium ion transport" evidence=IEA

GO:0006813 "potassium ion transport" evidence=IEA

FB|FBgn0015776 nrv1 "nervana 1" [Drosophila melanogaster (taxid:7227)]

 Score = 240 (89.5 bits), Expect = 2.7e-20, P = 2.7e-20
 Identities = 49/131 (37%), Positives = 70/131 (53%)

Query:    26 PSLGFRPMPPESHVDSTLIWFKQDPNNYKYWTNELDNFLEKYRDVTKRPGQGQNIVKCDY 85
             P LGFRP+  ++   S + +  + P    YW   +D+FL  Y        +G+++  C +
Sbjct:    91 PGLGFRPLSEQTERGSVIAFDGKKPAESDYWIELIDDFLRDYNHT-----EGRDMKHCGF 145

Query:    86 GVPRPPGKVCDIDMNRFGPCKKENSYSYGKGTPCIFLKLNKIFNWQPEFYNDTNKLPEKM 145
             G    P  VC ++ + FG C K N+Y Y    PCIFLKLNKIF W PE Y+   K    M
Sbjct:   146 GQVLEPTDVCVVNTDLFGGCSKANNYGYKTNQPCIFLKLNKIFGWIPEVYDKEEK---DM 202

Query:   146 PNDLKNDIKQS 156
             P+DLK  I ++
Sbjct:   203 PDDLKKVINET 213

GO:0005391 "sodium:potassium-exchanging ATPase activity" evidence=ISS;NAS;IMP

GO:0008324 "cation transmembrane transporter activity" evidence=IDA

GO:0005890 "sodium:potassium-exchanging ATPase complex" evidence=IC;ISS;NAS

GO:0006812 "cation transport" evidence=IDA

GO:0005886 "plasma membrane" evidence=ISS;IDA

GO:0006813 "potassium ion transport" evidence=IEA;NAS

GO:0006814 "sodium ion transport" evidence=IEA;NAS

GO:0005515 "protein binding" evidence=IPI

WB|WBGene00010117 nkb-3 [Caenorhabditis elegans (taxid:6239)]

 Score = 164 (62.8 bits), Expect = 8.7e-12, P = 8.7e-12
 Identities = 40/130 (30%), Positives = 66/130 (50%)

Query:    26 PSLGFRPMPPESHVDSTLIWFK-QDPNNYKYWTNELDNFLEKYRDV--TKRPGQGQNIVK 82
             P +G++P   E+  DSTLI F  QD  +++ +  +LDN+L KY++   T+  G   N   
Sbjct:    93 PGVGYQPWLKENP-DSTLIKFNLQDSKSWEPYVKQLDNYLSKYKNTNETRDCGASDNNDA 151

Query:    83 CDYGVPRPPGKVCDIDMNRF--GPCKKENSYSYGKGTPCIFLKLNKIFNWQPEFYNDTNK 140
              +      P   C  D+  F    C  ++ Y Y  G PC+ + LN++  W+P  Y+D   
Sbjct:   152 LETDTDTFP---CRFDLGLFEKANCGAKDQYGYKSGKPCVAVSLNRLIGWRPVNYDD-GS 207

Query:   141 LPEKMPNDLK 150
             +PE++    K
Sbjct:   208 VPEEIKGRYK 217

GO:0005391 "sodium:potassium-exchanging ATPase activity" evidence=IEA

GO:0006813 "potassium ion transport" evidence=IEA

GO:0006814 "sodium ion transport" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0046034 "ATP metabolic process" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

WB|WBGene00007646 nkb-1 [Caenorhabditis elegans (taxid:6239)]

 Score = 154 (59.3 bits), Expect = 1.2e-10, P = 1.2e-10
 Identities = 36/130 (27%), Positives = 65/130 (50%)

Query:    26 PSLGFRPMPPESHVDSTLIWFK-QDPNNYKYWTNELDNFLEKYRD---VTKRPGQGQNIV 81
             P +G++P   E   DSTLI +  +D  +YK +  ++  +L KY      T+  G G +  
Sbjct:    96 PGVGYQPWLKE-RPDSTLIKYNLRDQKSYKAYLEQMKTYLTKYDSNATETRECGAGDSND 154

Query:    82 KCDYGVPRPPGKVCDIDMNRFGP-CKKENSYSYGKGTPCIFLKLNKIFNWQPEFYNDTNK 140
               +     P    C  D++ F   C +++ + Y  G PC+ + LN++  W+P  Y + N 
Sbjct:   155 DLE---KNPDALPCRFDLSVFDKGCSEKSDFGYKSGKPCVIISLNRLIGWRPTDYQE-NS 210

Query:   141 LPEKMPNDLK 150
             +PE++ +  K
Sbjct:   211 VPEEVKDRYK 220

GO:0005391 "sodium:potassium-exchanging ATPase activity" evidence=IEA

GO:0006813 "potassium ion transport" evidence=IEA

GO:0006814 "sodium ion transport" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0046034 "ATP metabolic process" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0009792 "embryo development ending in birth or egg hatching" evidence=IMP

GO:0040011 "locomotion" evidence=IMP

GO:0040007 "growth" evidence=IMP

GO:0002119 "nematode larval development" evidence=IMP

GO:0010171 "body morphogenesis" evidence=IMP

GO:0040010 "positive regulation of growth rate" evidence=IMP

GO:0040018 "positive regulation of multicellular organism growth" evidence=IMP

GO:0006898 "receptor-mediated endocytosis" evidence=IMP

GO:0048477 "oogenesis" evidence=IMP

GO:0000003 "reproduction" evidence=IMP

UNIPROTKB|P33879 ATP1B3 "Sodium/potassium-transporting ATPase subunit beta-3" [Gallus gallus (taxid:9031)]

 Score = 135 (52.6 bits), Expect = 1.1e-08, P = 1.1e-08
 Identities = 41/132 (31%), Positives = 63/132 (47%)

Query:    23 VCKPSLGFRPMPPESHVDSTLIWF--KQDPNNYKYWTNELDNFLEKYRDVTKRPGQGQNI 80
             +  P L   P P     D+ L ++  K D  +Y  + + L  FLE Y D +K   Q QNI
Sbjct:    76 ISSPGLMISPKP-----DTALEFYFNKSDAQSYAEYVSTLRKFLETYDD-SK---QSQNI 126

Query:    81 VKCDYGVPRPPG-----KVCDIDMNRFGPC--KKENSYSYGKGTPCIFLKLNKIFNWQPE 133
               C  G           K C  +++  G C  K++ ++ Y KGTPC+ +K+N+I   +PE
Sbjct:   127 -NCTPGKVFDQNDVAVKKACRFNLSELGQCSGKEDKTFGYSKGTPCVLVKMNRIIGLKPE 185

Query:   134 ---FYNDTNKLP 142
                +   T+K P
Sbjct:   186 GEPYIQCTSKEP 197

GO:0005890 "sodium:potassium-exchanging ATPase complex" evidence=IEA

GO:0006813 "potassium ion transport" evidence=IEA

GO:0006814 "sodium ion transport" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

UNIPROTKB|G3MWR4 ATP1B1 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 134 (52.2 bits), Expect = 1.7e-08, P = 1.7e-08
 Identities = 38/126 (30%), Positives = 61/126 (48%)

Query:    25 KPSLGFRPMPPE----SHVDSTLIWFK-QDPNNYKYWTNELDNFLEKYRDVTKRP----- 74
             KP+   R  PP       +  T I F+  DP +Y  + + +DNFL+KYRD  ++      
Sbjct:    65 KPTYQDRVAPPGLTQIPQIQKTEIAFRPNDPKSYMTYVDNIDNFLKKYRDSAQKDDMIFE 124

Query:    75 --GQGQNIVKCDYG-VPRPPG--KVCDIDMNRFGPCK--KENSYSYGKGTPCIFLKLNKI 127
               G   + +K D G +    G  KVC   +   G C    + +Y Y  G PC+ +KLN++
Sbjct:   125 DCGNVPSELK-DRGELNNEQGERKVCRFKLEWLGNCSGINDETYGYKDGKPCVIIKLNRV 183

Query:   128 FNWQPE 133
               ++P+
Sbjct:   184 LGFKPK 189

GO:0016323 "basolateral plasma membrane" evidence=IEA

GO:0006814 "sodium ion transport" evidence=IEA

GO:0006813 "potassium ion transport" evidence=IEA

GO:0005890 "sodium:potassium-exchanging ATPase complex" evidence=IEA

MGI|MGI:107788 Atp1b3 "ATPase, Na+/K+ transporting, beta 3 polypeptide" [Mus musculus (taxid:10090)]

 Score = 130 (50.8 bits), Expect = 3.7e-08, P = 3.7e-08
 Identities = 37/143 (25%), Positives = 69/143 (48%)

Query:    12 SLRQEFNPGLPVCK---PSLGFRPMP-PESHVDSTLIWFKQDPNNYKYWTNELDNFLEKY 67
             ++ Q  N  +P  +   PS G    P P++ ++ T  +   +P  YK    +L++FL+ Y
Sbjct:    60 AMLQTLNDEVPKYRDQIPSPGLMVFPKPQTALEYT--FSMSEPQTYKKLVEDLESFLKPY 117

Query:    68 RDVTKRPGQGQNIVKCDYGVP----RPPGKVCDIDMNRFGPCK--KENSYSYGKGTPCIF 121
               V ++    +N+  C  G P     P  + C   ++    C    + ++ Y KG PCI 
Sbjct:   118 -SVEEQ----KNLTSCPDGAPFIQHGPDYRACQFPVSLLEECSGVTDANFGYSKGQPCIL 172

Query:   122 LKLNKIFNWQPEFYNDTNKLPEK 144
             +K+N+I +  P+ Y   + LP++
Sbjct:   173 VKMNRIIDLIPDGYPQISCLPKE 195

GO:0005391 "sodium:potassium-exchanging ATPase activity" evidence=ISO

GO:0005515 "protein binding" evidence=IPI

GO:0005737 "cytoplasm" evidence=IDA

GO:0005886 "plasma membrane" evidence=ISO

GO:0005890 "sodium:potassium-exchanging ATPase complex" evidence=ISO

GO:0005901 "caveola" evidence=ISO

GO:0006810 "transport" evidence=IEA

GO:0006811 "ion transport" evidence=IEA

GO:0006813 "potassium ion transport" evidence=ISO

GO:0006814 "sodium ion transport" evidence=ISO

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0030001 "metal ion transport" evidence=ISO

UNIPROTKB|B7Z9S8 ATP1B1 "Sodium/potassium-transporting ATPase subunit beta-1" [Homo sapiens (taxid:9606)]

 Score = 128 (50.1 bits), Expect = 4.4e-08, P = 4.4e-08
 Identities = 35/125 (28%), Positives = 57/125 (45%)

Query:    25 KPSLGFRPMPPE----SHVDSTLIWFK-QDPNNYKYWTNELDNFLEKYRDVTKRPGQ--- 76
             KP+   R  PP       +  T I F+  DP +Y+ +   +  FLEKY+D  +R      
Sbjct:     9 KPTYQDRVAPPGLTQIPQIQKTEISFRPNDPKSYEAYVLNIVRFLEKYKDSAQRDDMIFE 68

Query:    77 ------GQNIVKCDYGVPRPPGKVCDIDMNRFGPCK--KENSYSYGKGTPCIFLKLNKIF 128
                    +   + D+   R   KVC   +   G C    + +Y Y +G PCI +KLN++ 
Sbjct:    69 DCGDVPSEPKERGDFNHERGERKVCRFKLEWLGNCSGLNDETYGYKEGKPCIIIKLNRVL 128

Query:   129 NWQPE 133
              ++P+
Sbjct:   129 GFKPK 133

GO:0001666 "response to hypoxia" evidence=IEA

GO:0005391 "sodium:potassium-exchanging ATPase activity" evidence=IEA

GO:0005890 "sodium:potassium-exchanging ATPase complex" evidence=IEA

GO:0005901 "caveola" evidence=IEA

GO:0016323 "basolateral plasma membrane" evidence=IEA

GO:0016324 "apical plasma membrane" evidence=IEA

UNIPROTKB|A6NGH2 ATP1B1 "Sodium/potassium-transporting ATPase subunit beta-1" [Homo sapiens (taxid:9606)]

 Score = 128 (50.1 bits), Expect = 7.3e-08, P = 7.3e-08
 Identities = 35/125 (28%), Positives = 57/125 (45%)

Query:    25 KPSLGFRPMPPE----SHVDSTLIWFK-QDPNNYKYWTNELDNFLEKYRDVTKRPGQ--- 76
             KP+   R  PP       +  T I F+  DP +Y+ +   +  FLEKY+D  +R      
Sbjct:    57 KPTYQDRVAPPGLTQIPQIQKTEISFRPNDPKSYEAYVLNIVRFLEKYKDSAQRDDMIFE 116

Query:    77 ------GQNIVKCDYGVPRPPGKVCDIDMNRFGPCK--KENSYSYGKGTPCIFLKLNKIF 128
                    +   + D+   R   KVC   +   G C    + +Y Y +G PCI +KLN++ 
Sbjct:   117 DCGDVPSEPKERGDFNHERGERKVCRFKLEWLGNCSGLNDETYGYKEGKPCIIIKLNRVL 176

Query:   129 NWQPE 133
              ++P+
Sbjct:   177 GFKPK 181

GO:0005890 "sodium:potassium-exchanging ATPase complex" evidence=IEA

GO:0006813 "potassium ion transport" evidence=IEA

GO:0006814 "sodium ion transport" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	168
pfam00287	289	pfam00287, Na_K-ATPase, Sodium / potassium ATPase	1e-15
TIGR01107	289	TIGR01107, Na_K_ATPase_bet, Sodium Potassium ATPas	1e-06

>gnl|CDD|215838 pfam00287, Na_K-ATPase, Sodium / potassium ATPase beta chain

 Score = 72.0 bits (177), Expect = 1e-15
 Identities = 34/123 (27%), Positives = 56/123 (45%), Gaps = 14/123 (11%)

Query: 26  PSLGFRPMPPESHVDSTLIWF-KQDPNNYKYWTNELDNFLEKYRDVTKRPGQGQN----- 79
           P L  RP           I F   DP +++ + + L+ FLE Y D +K+ G  +N     
Sbjct: 80  PGLMIRPKV----YKGLEISFNVSDPKSWQEYVHTLNEFLEPYND-SKQSGNFENCTPGK 134

Query: 80  -IVKCDYGVPRPPGKVCDIDMNRFGPCKKEN--SYSYGKGTPCIFLKLNKIFNWQPEFYN 136
              +  +G P    K C  +    G C   N  ++ Y +G PC+ +K+N+I  ++PE   
Sbjct: 135 YFDQGPFGAPNGEKKACQFNREWLGNCSGLNDPTFGYSEGKPCVLIKMNRIIGFKPEPPK 194

Query: 137 DTN 139
           + N
Sbjct: 195 NYN 197

Length = 289

>gnl|CDD|162204 TIGR01107, Na_K_ATPase_bet, Sodium Potassium ATPase beta subunit

 Score = 46.6 bits (111), Expect = 1e-06
 Identities = 24/96 (25%), Positives = 44/96 (45%), Gaps = 15/96 (15%)

Query: 49  DPNNYKYWTNELDNFLEKYRDVTKRPGQGQNIVKC----------DYGVPRPPGKVCDID 98
           DP++Y+ +   L  FL+ Y D  +   + +N+  C           +  P    K C   
Sbjct: 98  DPSSYEGYVQNLHKFLKPYNDSAQ---EDKNLFDCGDGAEYEQRGPFNAPYGTKKACQFK 154

Query: 99  MNRFGPCK--KENSYSYGKGTPCIFLKLNKIFNWQP 132
            +  G C    + ++ Y +G PCI +K+N+I  ++P
Sbjct: 155 RDWLGNCSGLNDPTFGYSEGKPCIIIKMNRIIGFKP 190

This model describes the Na+/K+ ATPase beta subunit in eukaryotes. Na+/K+ ATPase(also called Sodium-Potassium pump) is intimately associated with the plasma membrane. It couples the energy released by the hydrolysis of ATP to extrude 3 Na+ ions, with the concomitant uptake of 2K+ ions, against their ionic gradients [Transport and binding proteins, Cations and iron carrying compounds]. Length = 289

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	168
PF00287	289	Na_K-ATPase: Sodium / potassium ATPase beta chain;	100.0
TIGR01107	289	Na_K_ATPase_bet Sodium Potassium ATPase beta subun	100.0
KOG3927|consensus	300		100.0

>PF00287 Na_K-ATPase: Sodium / potassium ATPase beta chain; InterPro: IPR000402 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane

Probab=100.00  E-value=4.2e-39  Score=274.40  Aligned_cols=126  Identities=40%  Similarity=0.808  Sum_probs=77.6

Q ss_pred             ChhhhHHHhhhhccc-ccCCCcccCCCcceeeCCCCCCCCcceEEEEe-cCCccHHHHHHHHHHHHHHhcccCCCCCCCC
Q psy12681          1 MQAQCRQKNFVSLRQ-EFNPGLPVCKPSLGFRPMPPESHVDSTLIWFK-QDPNNYKYWTNELDNFLEKYRDVTKRPGQGQ   78 (168)
Q Consensus         1 ~f~~~~~~~~~tl~~-~~~~s~~~~~PGL~~rP~~~~~~~~~~~I~f~-~~~~s~~~yv~~L~~FL~~Y~~~~~~~~~~~   78 (168)
                      |||+|||+||+||++ +...+.++++|||++||++.  . ++++|+|+ +++++|+.|+++|++||++|++..+     .
T Consensus        54 lfa~~m~v~l~tld~~~Pk~~~~~~~PGL~~rP~~~--~-~s~~I~f~~s~~~s~~~yv~~L~~FL~~Y~~~~~-----~  125 (289)
T PF00287_consen   54 LFAICMWVFLQTLDPDVPKYQDRGSNPGLGFRPNPD--T-ESTLISFNASDPSSYQPYVDRLDEFLKPYNDSSQ-----K  125 (289)
T ss_dssp             HHHHHHHHHHHTSSSSS-S-STTS-S--EEESS--T--T---SEEEE-TT-SGGGHHHHHHHHHHHHCC-TTTS------
T ss_pred             HHHHHHHHHHHHCCCCCCceecccccceeeecCCCC--c-CcceEEEECCCchhHHHHHHHHHHHHHHhccccc-----c
Confidence            599999999999996 22233348999999999996  2 78999999 9999999999999999999999876     3


Q ss_pred             CccCCCCC---------CCCCCCCceeeccCCccCCCC--CCCCccCCCCceEEEEecccCCeeeee
Q psy12681         79 NIVKCDYG---------VPRPPGKVCDIDMNRFGPCKK--ENSYSYGKGTPCIFLKLNKIFNWQPEF  134 (168)
Q Consensus        79 ~~~~C~~~---------~~~~~~~~C~F~~~~lg~Cs~--d~~yGY~~g~PCI~lKLNrI~gw~P~~  134 (168)
                      ...+|+.+         ....+++||+|++++||+|++  |+.|||++|+|||||||||||||+|++
T Consensus       126 ~~~~C~~g~~~~~~~~~~~~~~~~~C~F~~~~lg~Cs~~~d~~~GY~~g~PCI~lKlNri~gw~P~~  192 (289)
T PF00287_consen  126 NNENCDPGQYFEQPDFGSPNPPKKACQFDRSWLGPCSGENDPTFGYSSGKPCIFLKLNRIIGWKPEP  192 (289)
T ss_dssp             SEE---S-S----SSSSSSSSS--EE---GGGSTTS----SSS----SSS-EEEEEE---BT---S-
T ss_pred             ccccCCCcceeecCccccCCCCCcEeEEechhhccCCCCCCCCccccCCCceEEEEcccccCccccc
Confidence            37788743         234678999999999999998  455999999999999999999999997

ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the beta subunit found in the P-type cation exchange ATPases located in the plasma membranes of animal cells. These P-ATPases include both H+/K+-ATPases (3.6.3.10 from EC) and Na+/K+-ATPases (3.6.3.9 from EC), which belong to the IIC subfamily of ATPases [, ]. These ATPases catalyse the hydrolysis of ATP coupled with the exchange of cations, pumping one cation out of the cell (H+ or Na+) in exchange for K+. These ATPases contain an alpha subunit (IPR005775 from INTERPRO) that is the catalytic component, and a glycosylated beta subunit that regulates the number of sodium pumps transported to the plasma membrane through the assembly of alpha/beta heterodimers. The beta subunit has three highly conserved disulphide bonds within the extracellular domain that stabilise the alpha subunit, the alpha/beta interaction, and the catalytic activity of the alpha subunit []. Different beta isoforms exist, permitting greater regulatory control. An example of a H+/K+-ATPase is the gastric pump responsible for acid secretion in the stomach, transporting protons from the cytoplasm of parietal cells to create a large pH gradient in exchange for the internalisation of potassium ions, using ATP hydrolysis to drive the pump []. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0005391 sodium:potassium-exchanging ATPase activity, 0006754 ATP biosynthetic process, 0006813 potassium ion transport, 0006814 sodium ion transport, 0016020 membrane; PDB: 2XZB_B 3A3Y_B 3N2F_D 3B8E_D 3KDP_D 3N23_D.

>TIGR01107 Na_K_ATPase_bet Sodium Potassium ATPase beta subunit

Probab=100.00  E-value=4.1e-38  Score=267.95  Aligned_cols=125  Identities=26%  Similarity=0.552  Sum_probs=104.9

Q ss_pred             ChhhhHHHhhhhccc-ccCCCcccCCCcceeeCCCCCCCCcceEEEEe-cCCccHHHHHHHHHHHHHHhcccCCCCCCCC
Q psy12681          1 MQAQCRQKNFVSLRQ-EFNPGLPVCKPSLGFRPMPPESHVDSTLIWFK-QDPNNYKYWTNELDNFLEKYRDVTKRPGQGQ   78 (168)
Q Consensus         1 ~f~~~~~~~~~tl~~-~~~~s~~~~~PGL~~rP~~~~~~~~~~~I~f~-~~~~s~~~yv~~L~~FL~~Y~~~~~~~~~~~   78 (168)
                      |||+|||+||+||++ +...+.++++|||++||..     +.++|+|+ +++++|+.|+++|++||++|++..|.   ..
T Consensus        53 ~F~~~m~v~l~Tl~~~~Pk~q~~~~~PGL~~rP~~-----~~~eI~f~~~~~~s~~~yv~~l~~FL~~Y~~~~q~---~~  124 (289)
T TIGR01107        53 IFIGTIQVMLQTISDFTPKYQDRVASPGLTQRPKV-----QKLEISFNVSDPSSYEGYVQNLHKFLKPYNDSAQE---DK  124 (289)
T ss_pred             HHHHHHHHHHHHcCCCCCCCCcCCCCCceeeccCC-----CceEEEEeCCChHHHHHHHHHHHHHHHhhchhhcc---cc
Confidence            699999999999996 3344555789999999965     35789999 99999999999999999999986541   22


Q ss_pred             CccCCCC----CC------CCCCCCceeeccCCccCCCC--CCCCccCCCCceEEEEecccCCeeee
Q psy12681         79 NIVKCDY----GV------PRPPGKVCDIDMNRFGPCKK--ENSYSYGKGTPCIFLKLNKIFNWQPE  133 (168)
Q Consensus        79 ~~~~C~~----~~------~~~~~~~C~F~~~~lg~Cs~--d~~yGY~~g~PCI~lKLNrI~gw~P~  133 (168)
                      +..+|..    ..      ...+++||+|++++||+||+  |++|||++|+|||||||||||||+|+
T Consensus       125 ~~~~C~~~~~~~~~~~~~~~~~~~~~C~F~~~~Lg~Cs~~~D~~fGY~~GkPCI~iKLNrIig~~P~  191 (289)
T TIGR01107       125 NLFDCGDGAEYEQRGPFNAPYGTKKACQFKRDWLGNCSGLNDPTFGYSEGKPCIIIKMNRIIGFKPK  191 (289)
T ss_pred             ccccCCccccccccCCccccccccccceecHHhccCCCCCCCCCcCcCCCCCeEEEEeeeeeCcccC
Confidence            3478943    21      22456899999999999998  56699999999999999999999999

This model describes the Na+/K+ ATPase beta subunit in eukaryotes. Na+/K+ ATPase(also called Sodium-Potassium pump) is intimately associated with the plasma membrane. It couples the energy released by the hydrolysis of ATP to extrude 3 Na+ ions, with the concomitant uptake of 2K+ ions, against their ionic gradients.

>KOG3927|consensus

Probab=100.00  E-value=8.2e-37  Score=260.49  Aligned_cols=135  Identities=40%  Similarity=0.865  Sum_probs=120.8

Q ss_pred             ChhhhHHHhhhhccc---ccCCCcccCCCcceeeCCCCCCCCcceEEEEe-cCCccHHHHHHHHHHHHHHhcccCCCCCC
Q psy12681          1 MQAQCRQKNFVSLRQ---EFNPGLPVCKPSLGFRPMPPESHVDSTLIWFK-QDPNNYKYWTNELDNFLEKYRDVTKRPGQ   76 (168)
Q Consensus         1 ~f~~~~~~~~~tl~~---~~~~s~~~~~PGL~~rP~~~~~~~~~~~I~f~-~~~~s~~~yv~~L~~FL~~Y~~~~~~~~~   76 (168)
                      +||+|||+||+||++   ++.+|  +++|||||||.+.. . ++++|+|+ +++++|++|+++|++||++|++..+.+..
T Consensus        61 lf~~~~~~~~~tidp~~P~~~~~--~~~PGl~~~P~~~~-~-~~~~i~~~~~~~~~~~~~~~~i~~fL~kY~d~~~~~~~  136 (300)
T KOG3927|consen   61 LFAGCMWFMLQTIDPKVPKYKDS--GANPGLSFRPNPPR-T-DSTLISFNPSDPKSYANYVDRIDDFLKKYNDNGQEPRM  136 (300)
T ss_pred             HHHHHHHHHHHhcCCCCCccccc--CCCCceeecCCCCc-C-cceeEEEeCCChhhHHHHHHHHHHHHHhhCcccccccc
Confidence            589999999999997   44455  99999999999973 3 99999999 99999999999999999999998776555


Q ss_pred             CCCccCCCCCCCCCCCCceeeccCCccCCC--CCCCCccCCCCceEEEEecccCCeeeeecCCCC
Q psy12681         77 GQNIVKCDYGVPRPPGKVCDIDMNRFGPCK--KENSYSYGKGTPCIFLKLNKIFNWQPEFYNDTN  139 (168)
Q Consensus        77 ~~~~~~C~~~~~~~~~~~C~F~~~~lg~Cs--~d~~yGY~~g~PCI~lKLNrI~gw~P~~y~~~~  139 (168)
                      +.+..+|.+.++..+..+|+|+++.|++|+  .+++|||++|+||||||||||+||+|+.|+...
T Consensus       137 ~~~~~~~~~~q~~~~~~~ckfd~~~f~~cs~~~d~~~Gy~~g~Pci~iklNri~G~~Pe~~~~~n  201 (300)
T KOG3927|consen  137 GVNIDNCWFYQPGTPTVACKFDLDGFGNCSGSNDDNFGYSKGQPCIFLKLNRILGWKPELYNRPN  201 (300)
T ss_pred             cccCcccccccCCCCCceEEecHHHcCcCccccCCCccccCCCceEEEEeeeecCCccccCCCcC
Confidence            667778888888888889999999999995  578899999999999999999999999998855

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	168
3n23_B	277	Crystal Structure Of The High Affinity Complex Betw		3e-06
3kdp_B	286	Crystal Structure Of The Sodium-potassium Pump Leng		5e-06

>pdb|3N23|B Chain B, Crystal Structure Of The High Affinity Complex Between Ouabain And The E2p Form Of The Sodium-Potassium Pump Length = 277

Iteration: 1
 Score = 48.1 bits (113), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 38/147 (25%), Positives = 63/147 (42%), Gaps = 20/147 (13%)
Query: 5   CRQKNFVSLRQEFNPGLPVCKPSLGFRPMPPES----HVDSTLIWFK-QDPNNYKYWTNE 59
           C    F+   Q     +   KP+   R  PP          T I F+  DP +Y+ +   
Sbjct: 19  CLAGIFIGTIQVMLLTISEFKPTYQDRVAPPGLTQIPQSQKTEISFRPNDPQSYESYVVS 78
Query: 60  LDNFLEKYRDVTKR-----------PGQGQNIVKCDYGVPRPPGKVCDIDMNRFGPCKKE 108
           +  FLEKY+D+ ++           P + +   + +Y   R   KVC   +   G C   
Sbjct: 79  IVRFLEKYKDLAQKDDMIFEDCGNVPSELKE--RGEYNNERGERKVCRFRLEWLGNCSGL 136
Query: 109 N--SYSYGKGTPCIFLKLNKIFNWQPE 133
           N  +Y Y  G PC+ +KLN++  ++P+
Sbjct: 137 NDETYGYKDGKPCVIIKLNRVLGFKPK 163

>pdb|3KDP|B Chain B, Crystal Structure Of The Sodium-potassium Pump Length = 286

Iteration: 1
 Score = 47.0 bits (110), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 38/147 (25%), Positives = 63/147 (42%), Gaps = 20/147 (13%)
Query: 5   CRQKNFVSLRQEFNPGLPVCKPSLGFRPMPPES----HVDSTLIWFK-QDPNNYKYWTNE 59
           C    F+   Q     +   KP+   R  PP          T I F+  DP +Y+ +   
Sbjct: 28  CLAGIFIGTIQVMLLTISEFKPTYQDRVAPPGLTQIPQSQKTEISFRPNDPQSYESYVVS 87
Query: 60  LDNFLEKYRDVTKR-----------PGQGQNIVKCDYGVPRPPGKVCDIDMNRFGPCKKE 108
           +  FLEKY+D+ ++           P + +   + +Y   R   KVC   +   G C   
Sbjct: 88  IVRFLEKYKDLAQKDDMIFEDCGNVPSELKE--RGEYNNERGERKVCRSRLEWLGNCSGL 145
Query: 109 N--SYSYGKGTPCIFLKLNKIFNWQPE 133
           N  +Y Y  G PC+ +KLN++  ++P+
Sbjct: 146 NDETYGYKDGKPCVIIKLNRVLGFKPK 172

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	168
2zxe_B	305	Na+,K+-ATPase beta subunit; membrane protein, ION	7e-31
3ixz_B	290	Potassium-transporting ATPase subunit beta; ION pu	2e-27
3kdp_B	286	Sodium/potassium-transporting ATPase subunit beta;	5e-27

>2zxe_B Na+,K+-ATPase beta subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_B* 3b8e_B* Length = 305

 Score =  112 bits (281), Expect = 7e-31
 Identities = 28/140 (20%), Positives = 52/140 (37%), Gaps = 17/140 (12%)

Query: 26  PSLGFRPMPPESHVDSTLIWFK-QDPNNYKYWTNELDNFLEKYRDVTKRPGQ-------- 76
           P L   P         T I F   +P +Y+ +   +   ++ Y + ++            
Sbjct: 76  PGLSHAPYA-----IKTEISFSISNPKSYESFVKSMHKLMDLYNESSQAGNSPFEDCSDT 130

Query: 77  -GQNIVKCDYGVPRPPGKVCDIDMNRFGPCK--KENSYSYGKGTPCIFLKLNKIFNWQPE 133
               I + D    +   K C         C    + +Y Y +G PC+  KLN+I  + P+
Sbjct: 131 PADYIKRGDLDDSQGQKKACRFSRMWLKNCSGLDDTTYGYAEGKPCVVAKLNRIIGFYPK 190

Query: 134 FYNDTNKLPEKMPNDLKNDI 153
              +T  LPE++  +    +
Sbjct: 191 PLKNTTDLPEELQANYNQYV 210

>3ixz_B Potassium-transporting ATPase subunit beta; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2xzb_B Length = 290

 Score =  103 bits (257), Expect = 2e-27
 Identities = 20/151 (13%), Positives = 40/151 (26%), Gaps = 7/151 (4%)

Query: 10  FVSLRQEFNPGLPVCKPSLGFRPMPPESHVDSTLIWFK-QDPNNYKYWTNELDNFLEKYR 68
            +     + P       S G    P         I +   D   +    + L  FL  Y 
Sbjct: 62  LMRTIDPYTPDYQDQLKSPGVTLRPDVYGEKGLDISYNVSDSTTWAGLAHTLHRFLAGYS 121

Query: 69  DVTKRP----GQGQNIVKCDYGVPRPPGKVCDIDMNRFGPCK--KENSYSYGKGTPCIFL 122
              +         +   +  +  P      C    +    C    + ++ + +G PC  +
Sbjct: 122 PAAQEGSINCTSEKYFFQESFLAPNHTKFSCKFTADMLQNCSGRPDPTFGFAEGKPCFII 181

Query: 123 KLNKIFNWQPEFYNDTNKLPEKMPNDLKNDI 153
           K+N+I  + P            +        
Sbjct: 182 KMNRIVKFLPGNSTAPRVDCAFLDQPRDGPP 212

>3kdp_B Sodium/potassium-transporting ATPase subunit beta; alpha helical, heterotrimeric membrane protein complex, ATP- hydrolase, ION transport, magnesium; HET: CLR; 3.50A {Sus scrofa} PDB: 3n2f_B* 3n23_B* Length = 286

 Score =  101 bits (253), Expect = 5e-27
 Identities = 31/140 (22%), Positives = 57/140 (40%), Gaps = 17/140 (12%)

Query: 26  PSLGFRPMPPESHVDSTLIWFK-QDPNNYKYWTNELDNFLEKYRDVTKRPG--------- 75
           P L   P         T I F+  DP +Y+ +   +  FLEKY+D+ ++           
Sbjct: 58  PGLTQIPQS-----QKTEISFRPNDPQSYESYVVSIVRFLEKYKDLAQKDDMIFEDCGNV 112

Query: 76  QGQNIVKCDYGVPRPPGKVCDIDMNRFGPC--KKENSYSYGKGTPCIFLKLNKIFNWQPE 133
             +   + +Y   R   KVC   +   G C    + +Y Y  G PC+ +KLN++  ++P+
Sbjct: 113 PSELKERGEYNNERGERKVCRSRLEWLGNCSGLNDETYGYKDGKPCVIIKLNRVLGFKPK 172

Query: 134 FYNDTNKLPEKMPNDLKNDI 153
              + +     +       +
Sbjct: 173 PPKNESLETYPVMKYNPYVL 192

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	168
3kdp_B	286	Sodium/potassium-transporting ATPase subunit beta;	100.0
2zxe_B	305	Na+,K+-ATPase beta subunit; membrane protein, ION	100.0
3ixz_B	290	Potassium-transporting ATPase subunit beta; ION pu	100.0

>3kdp_B Sodium/potassium-transporting ATPase subunit beta; alpha helical, heterotrimeric membrane protein complex, ATP- hydrolase, ION transport, magnesium; HET: CLR; 3.50A {Sus scrofa} PDB: 3n2f_B* 3n23_B*

Probab=100.00  E-value=2.1e-43  Score=299.12  Aligned_cols=141  Identities=26%  Similarity=0.545  Sum_probs=119.8

Q ss_pred             ChhhhHHHhhhhccc---ccCCCcccCCCcceeeCCCCCCCCcceEEEEe-cCCccHHHHHHHHHHHHHHhcccCCCCC-
Q psy12681          1 MQAQCRQKNFVSLRQ---EFNPGLPVCKPSLGFRPMPPESHVDSTLIWFK-QDPNNYKYWTNELDNFLEKYRDVTKRPG-   75 (168)
Q Consensus         1 ~f~~~~~~~~~tl~~---~~~~s~~~~~PGL~~rP~~~~~~~~~~~I~f~-~~~~s~~~yv~~L~~FL~~Y~~~~~~~~-   75 (168)
                      |||+|||+||+||++   ++.++  +++|||++||++.     +++|+|+ +++++|+.|+++|++||++|++..|... 
T Consensus        32 lFa~~m~v~l~TLd~~~Pkyqd~--~~~PGL~~~P~~~-----~~eI~f~~sd~~s~~~yv~~L~~FL~~Y~~~~q~~~~  104 (286)
T 3kdp_B           32 IFIGTIQVMLLTISEFKPTYQDR--VAPPGLTQIPQSQ-----KTEISFRPNDPQSYESYVVSIVRFLEKYKDLAQKDDM  104 (286)
T ss_dssp             HHHHHHHGGGSCSCSSSCSCCTT--TCSCCCCBSSCCS-----SSEEECCSSCTTTTHHHHHHHHHHHTTCCTTTSCSTT
T ss_pred             HHHHHHHHHHHhCcccCCcccCC--CCCCcceeccCCC-----ceEEEEECCChhhHHHHHHHHHHHHHHhcchhhcccc
Confidence            699999999999996   44444  6999999999984     5789999 9999999999999999999998765310 


Q ss_pred             --------CCCCccCCCCCCCCCCCCceeeccCCccCCC--CCCCCccCCCCceEEEEecccCCeeeeecCCCCCCCCCC
Q psy12681         76 --------QGQNIVKCDYGVPRPPGKVCDIDMNRFGPCK--KENSYSYGKGTPCIFLKLNKIFNWQPEFYNDTNKLPEKM  145 (168)
Q Consensus        76 --------~~~~~~~C~~~~~~~~~~~C~F~~~~lg~Cs--~d~~yGY~~g~PCI~lKLNrI~gw~P~~y~~~~~lP~~m  145 (168)
                              .|.-...|++++.+.+++||+|++++||+|+  .|++|||++|+|||||||||||||+|++|  .++.|++|
T Consensus       105 ~~~~C~~~~~~~~~~~~~~~~~~~~~~C~F~~~~lg~Csg~~d~~fGY~~g~PCI~lKlNRIig~~P~~~--~~~~~~~~  182 (286)
T 3kdp_B          105 IFEDCGNVPSELKERGEYNNERGERKVCRSRLEWLGNCSGLNDETYGYKDGKPCVIIKLNRVLGFKPKPP--KNESLETY  182 (286)
T ss_dssp             TEECCCSSCCCCCCCCCSSSSSSSCCEECCCGGGSTTSCCCCSSSCCCCSSSCCBCBCCCCCBTCCCCCC--CSSSCSSC
T ss_pred             cccccccCcccceeccccccCCCCCceeEeccccccCCCCCCCCCCCcCCCCCeEEEEeccccceeeccc--CCCCcccc
Confidence                    0122456677777788999999999999999  79999999999999999999999999998  34457899


Q ss_pred             CH-HHH
Q psy12681        146 PN-DLK  150 (168)
Q Consensus       146 P~-~Lk  150 (168)
                      |+ +|+
T Consensus       183 p~~~l~  188 (286)
T 3kdp_B          183 PVMKYN  188 (286)
T ss_dssp             SSSCCT
T ss_pred             cchhcc
Confidence            99 777

>2zxe_B Na+,K+-ATPase beta subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_B* 3b8e_B*

Probab=100.00  E-value=1.3e-42  Score=296.48  Aligned_cols=147  Identities=20%  Similarity=0.398  Sum_probs=116.5

Q ss_pred             ChhhhHHHhhhhccc-ccCCCcccCCCcceeeCCCCCCCCcceEEEEe-cCCccHHHHHHHHHHHHHHhcccCCCCCCCC
Q psy12681          1 MQAQCRQKNFVSLRQ-EFNPGLPVCKPSLGFRPMPPESHVDSTLIWFK-QDPNNYKYWTNELDNFLEKYRDVTKRPGQGQ   78 (168)
Q Consensus         1 ~f~~~~~~~~~tl~~-~~~~s~~~~~PGL~~rP~~~~~~~~~~~I~f~-~~~~s~~~yv~~L~~FL~~Y~~~~~~~~~~~   78 (168)
                      |||+|||+||+||++ +...+.++++|||++||+++     +++|+|+ +++++|+.|+++|++||++|+++.|    +.
T Consensus        50 lF~~~m~v~l~tl~~~~Pk~q~~i~~PGL~~~P~~~-----~~~I~f~~~~~~s~~~yv~~l~~FL~~Y~~~~q----~~  120 (305)
T 2zxe_B           50 IFIGTIQVLLLTLSDFEPKYQDRVAPPGLSHAPYAI-----KTEISFSISNPKSYESFVKSMHKLMDLYNESSQ----AG  120 (305)
T ss_dssp             HHHHHHHHHHHTSCSSSCSCCTTTCSCCBCCSSCCS-----SSEEEECTTCGGGTHHHHHHHHHHHGGGCGGGS----CS
T ss_pred             HHHHHHHHHHHHccccCCccccCCCCCeeeEecCCC-----CeEEEEeCCChhhHHHHHHHHHHHHHHhcchhh----cc
Confidence            599999999999996 22233346999999999974     7999999 9999999999999999999999865    34


Q ss_pred             C--ccCCCC-----------CCCCCCCCceeeccCCccCCCC--CCCCccCCCCceEEEEecccCCeeeeecCCCCCCCC
Q psy12681         79 N--IVKCDY-----------GVPRPPGKVCDIDMNRFGPCKK--ENSYSYGKGTPCIFLKLNKIFNWQPEFYNDTNKLPE  143 (168)
Q Consensus        79 ~--~~~C~~-----------~~~~~~~~~C~F~~~~lg~Cs~--d~~yGY~~g~PCI~lKLNrI~gw~P~~y~~~~~lP~  143 (168)
                      +  ..+|+.           ...+.+++||+|++++||+|++  |++|||++|+||||||||||+||+|++|++ ++||+
T Consensus       121 ~~~~~~C~~~~~~~~~~g~~~~~~~~~~~C~F~~~~Lg~Cs~~~d~~fGY~~g~PCI~lKlNrI~g~~P~~~~~-~~lP~  199 (305)
T 2zxe_B          121 NSPFEDCSDTPADYIKRGDLDDSQGQKKACRFSRMWLKNCSGLDDTTYGYAEGKPCVVAKLNRIIGFYPKPLKN-TTDLP  199 (305)
T ss_dssp             TTTEECCCSSCCCCCCCSSSCSSSSSCCEECCCGGGSTTC--------CCCSSSCCCEEEBCCCBTCCCCCCCT-TSCCT
T ss_pred             ccccccCCCcccccccccccccCCCCCceeEeechhccCCCCCCCCCCCcCCCCCeEEEEecceecccccCCcc-ccccH
Confidence            4  789984           2345678999999999999997  445999999999999999999999998765 56555


Q ss_pred             CCCHHHHHHHhhhccCCCceEEE
Q psy12681        144 KMPNDLKNDIKQSISQNAATYLI  166 (168)
Q Consensus       144 ~mP~~Lk~~i~~~~~~~~~~~~~  166 (168)
                      ++   |+++++      .+.|||
T Consensus       200 ~~---l~~~~~------~~~I~v  213 (305)
T 2zxe_B          200 EE---LQANYN------QYVLPL  213 (305)
T ss_dssp             TT---TTTCCT------TTEEEE
T ss_pred             HH---Hhhhhc------cCCCce
Confidence            55   366654      257776

>3ixz_B Potassium-transporting ATPase subunit beta; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_B 2xzb_B

Probab=100.00  E-value=1.1e-40  Score=282.83  Aligned_cols=129  Identities=17%  Similarity=0.375  Sum_probs=112.3

Q ss_pred             ChhhhHHHhhhhccc-ccCCCcccCCCcceeeCCCCCCCCcceEEEEe-cCCccHHHHHHHHHHHHHHhcccCCCCCCCC
Q psy12681          1 MQAQCRQKNFVSLRQ-EFNPGLPVCKPSLGFRPMPPESHVDSTLIWFK-QDPNNYKYWTNELDNFLEKYRDVTKRPGQGQ   78 (168)
Q Consensus         1 ~f~~~~~~~~~tl~~-~~~~s~~~~~PGL~~rP~~~~~~~~~~~I~f~-~~~~s~~~yv~~L~~FL~~Y~~~~~~~~~~~   78 (168)
                      |||+|||+||+||++ +...+.++++|||++||++.  ++++++|+|+ +++++|+.|+++|++||++|++..|     +
T Consensus        54 lFa~~m~v~l~Tld~~~Pkyqd~~~~PGL~~~P~~~--~~~~~~I~f~~sd~~s~~~yv~~l~~FL~~Y~~~~q-----~  126 (290)
T 3ixz_B           54 IFALCIYVLMRTIDPYTPDYQDQLKSPGVTLRPDVY--GEKGLDISYNVSDSTTWAGLAHTLHRFLAGYSPAAQ-----E  126 (290)
T ss_pred             HHHHHHHHHHHhCCCCCCCcccccCCCcceecCCCC--CCcceEEEEeCCCchHHHHHHHHHHHHHHHhCchhc-----c
Confidence            699999999999997 33344458999999999985  5678999999 9999999999999999999999765     3


Q ss_pred             CccCCCCCC---------CCCCCCceeeccCCccCCCC--CCCCccCCCCceEEEEecccCCeeeeecC
Q psy12681         79 NIVKCDYGV---------PRPPGKVCDIDMNRFGPCKK--ENSYSYGKGTPCIFLKLNKIFNWQPEFYN  136 (168)
Q Consensus        79 ~~~~C~~~~---------~~~~~~~C~F~~~~lg~Cs~--d~~yGY~~g~PCI~lKLNrI~gw~P~~y~  136 (168)
                      +..+|+.++         ++..++||+|++++||+|++  |++|||++|+|||||||||||||+|+.++
T Consensus       127 ~~~~C~~~~~~~q~~~~~~~~~~~~C~F~~~~lg~Csg~~d~~fGY~~g~PCI~iKlNrIig~~P~~~~  195 (290)
T 3ixz_B          127 GSINCTSEKYFFQESFLAPNHTKFSCKFTADMLQNCSGRPDPTFGFAEGKPCFIIKMNRIVKFLPGNST  195 (290)
T ss_pred             CcccCCCccccccccccCCCCCCceeeccccccCcCCCCCCCCCCcCCCCceEEEEeceEEeeecCCCC
Confidence            467898654         22446799999999999997  89999999999999999999999999875

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00