Psyllid ID: psy12863
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 150 | ||||||
| 195095248 | 621 | GH10790 [Drosophila grimshawi] gi|193905 | 0.493 | 0.119 | 0.666 | 4e-30 | |
| 195016732 | 884 | GH16481 [Drosophila grimshawi] gi|193897 | 0.48 | 0.081 | 0.683 | 5e-30 | |
| 87080449 | 674 | protein-O-xylosyltransferase [Drosophila | 0.493 | 0.109 | 0.666 | 6e-30 | |
| 195377291 | 885 | oxt [Drosophila virilis] gi|194154582|gb | 0.406 | 0.068 | 0.683 | 7e-30 | |
| 194746864 | 879 | oxt [Drosophila ananassae] gi|190623156| | 0.406 | 0.069 | 0.696 | 1e-29 | |
| 87080439 | 868 | protein-O-xylosyltransferase [Drosophila | 0.406 | 0.070 | 0.696 | 1e-29 | |
| 87080441 | 876 | protein-O-xylosyltransferase [Drosophila | 0.406 | 0.069 | 0.696 | 2e-29 | |
| 87080453 | 874 | protein-O-xylosyltransferase [Drosophila | 0.48 | 0.082 | 0.696 | 2e-29 | |
| 195587164 | 876 | oxt [Drosophila simulans] gi|194195344|g | 0.406 | 0.069 | 0.696 | 2e-29 | |
| 195493016 | 876 | oxt [Drosophila yakuba] gi|194180339|gb| | 0.48 | 0.082 | 0.696 | 2e-29 |
| >gi|195095248|ref|XP_001997834.1| GH10790 [Drosophila grimshawi] gi|193905698|gb|EDW04565.1| GH10790 [Drosophila grimshawi] | Back alignment and taxonomy information |
|---|
Score = 135 bits (341), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 54/81 (66%), Positives = 69/81 (85%)
Query: 3 VLRNSVHCFSYIDNNLHITNWKRSLGCKCQYRHVVDWCGCSPNDFRSSDYSRLVATKGKQ 62
VLRN+ HC SY+DNNLH+TNWKR GCKCQY+HVVDWCGCSPNDF+ D++RL+AT+ K
Sbjct: 200 VLRNTQHCHSYVDNNLHVTNWKRKQGCKCQYKHVVDWCGCSPNDFKPEDWARLLATEQKS 259
Query: 63 LYFARKFEPVVNQDIHLEVSS 83
L+FARKFEP++NQ + L++
Sbjct: 260 LFFARKFEPIINQAVLLQLEE 280
|
Source: Drosophila grimshawi Species: Drosophila grimshawi Genus: Drosophila Family: Drosophilidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|195016732|ref|XP_001984473.1| GH16481 [Drosophila grimshawi] gi|193897955|gb|EDV96821.1| GH16481 [Drosophila grimshawi] | Back alignment and taxonomy information |
|---|
| >gi|87080449|emb|CAJ76261.1| protein-O-xylosyltransferase [Drosophila virilis] | Back alignment and taxonomy information |
|---|
| >gi|195377291|ref|XP_002047424.1| oxt [Drosophila virilis] gi|194154582|gb|EDW69766.1| oxt [Drosophila virilis] | Back alignment and taxonomy information |
|---|
| >gi|194746864|ref|XP_001955874.1| oxt [Drosophila ananassae] gi|190623156|gb|EDV38680.1| oxt [Drosophila ananassae] | Back alignment and taxonomy information |
|---|
| >gi|87080439|emb|CAJ76256.1| protein-O-xylosyltransferase [Drosophila ananassae] | Back alignment and taxonomy information |
|---|
| >gi|87080441|emb|CAJ76257.1| protein-O-xylosyltransferase [Drosophila erecta] | Back alignment and taxonomy information |
|---|
| >gi|87080453|emb|CAJ76263.1| protein-O-xylosyltransferase [Drosophila yakuba] | Back alignment and taxonomy information |
|---|
| >gi|195587164|ref|XP_002083335.1| oxt [Drosophila simulans] gi|194195344|gb|EDX08920.1| oxt [Drosophila simulans] | Back alignment and taxonomy information |
|---|
| >gi|195493016|ref|XP_002094238.1| oxt [Drosophila yakuba] gi|194180339|gb|EDW93950.1| oxt [Drosophila yakuba] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 150 | ||||||
| UNIPROTKB|F1RLT2 | 839 | XYLT1 "Uncharacterized protein | 0.493 | 0.088 | 0.653 | 6.1e-34 | |
| RGD|620093 | 821 | Xylt1 "xylosyltransferase 1" [ | 0.493 | 0.090 | 0.626 | 1.2e-33 | |
| UNIPROTKB|Q9EPI1 | 821 | Xylt1 "Xylosyltransferase 1" [ | 0.493 | 0.090 | 0.626 | 1.2e-33 | |
| ZFIN|ZDB-GENE-111017-2 | 919 | xylt1 "xylosyltransferase I" [ | 0.493 | 0.080 | 0.653 | 1.4e-33 | |
| UNIPROTKB|F1NXX8 | 655 | XYLT1 "Uncharacterized protein | 0.493 | 0.112 | 0.64 | 2.5e-33 | |
| UNIPROTKB|F1PB62 | 827 | XYLT1 "Xylosyltransferase 1" [ | 0.493 | 0.089 | 0.64 | 3.2e-33 | |
| MGI|MGI:2444797 | 865 | Xylt2 "xylosyltransferase II" | 0.513 | 0.089 | 0.594 | 5e-33 | |
| UNIPROTKB|Q9H1B5 | 865 | XYLT2 "Xylosyltransferase 2" [ | 0.513 | 0.089 | 0.582 | 5.1e-33 | |
| UNIPROTKB|Q5QQ56 | 950 | XYLT1 "Xylosyltransferase 1" [ | 0.493 | 0.077 | 0.64 | 5.1e-33 | |
| MGI|MGI:2451073 | 953 | Xylt1 "xylosyltransferase 1" [ | 0.493 | 0.077 | 0.626 | 5.2e-33 |
| UNIPROTKB|F1RLT2 XYLT1 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 286 (105.7 bits), Expect = 6.1e-34, Sum P(2) = 6.1e-34
Identities = 49/75 (65%), Positives = 57/75 (76%)
Query: 3 VLRNSVHCFSYIDNNLHITNWKRSLGCKCQYRHVVDWCGCSPNDFRSSDYSRLVATKGKQ 62
VL NS HC S +DNNL ITNW R LGCKCQY+H+VDWCGCSPNDF+ D+ R T +
Sbjct: 415 VLENSPHCDSMVDNNLRITNWNRKLGCKCQYKHIVDWCGCSPNDFKPQDFHRFQQT-ARP 473
Query: 63 LYFARKFEPVVNQDI 77
+FARKFE VVNQ+I
Sbjct: 474 TFFARKFEAVVNQEI 488
|
|
| RGD|620093 Xylt1 "xylosyltransferase 1" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q9EPI1 Xylt1 "Xylosyltransferase 1" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
| ZFIN|ZDB-GENE-111017-2 xylt1 "xylosyltransferase I" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1NXX8 XYLT1 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1PB62 XYLT1 "Xylosyltransferase 1" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
| MGI|MGI:2444797 Xylt2 "xylosyltransferase II" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q9H1B5 XYLT2 "Xylosyltransferase 2" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q5QQ56 XYLT1 "Xylosyltransferase 1" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
| MGI|MGI:2451073 Xylt1 "xylosyltransferase 1" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 150 | |||
| pfam12529 | 142 | pfam12529, Xylo_C, Xylosyltransferase C terminal | 5e-17 |
| >gnl|CDD|221621 pfam12529, Xylo_C, Xylosyltransferase C terminal | Back alignment and domain information |
|---|
Score = 72.4 bits (178), Expect = 5e-17
Identities = 23/57 (40%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 78 HLEVSSSYDQKEQMSRDFLHAIGPYSEPVLIHEW-LTLVTHNITYLWIDPTNVLAAV 133
+LEV + +D KEQ+ R+F +GP E VL+ W +T +WIDP NV+A
Sbjct: 86 NLEVGTDWDPKEQIFRNFGGLLGPNDELVLVQRWARGPDNLTVTVVWIDPLNVIADS 142
|
This domain family is found in eukaryotes, and is typically between 169 and 183 amino acids in length. The family is found in association with pfam02485. There is a single completely conserved residue G that may be functionally important. Xylosyltransferases are enzymes involved in the biosynthesis of the glycosaminoglycan linker region in proteoglycans. Length = 142 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 150 | |||
| PF12529 | 178 | Xylo_C: Xylosyltransferase C terminal ; InterPro: | 99.92 | |
| PLN03183 | 421 | acetylglucosaminyltransferase family protein; Prov | 99.32 | |
| KOG0799|consensus | 439 | 98.12 |
| >PF12529 Xylo_C: Xylosyltransferase C terminal ; InterPro: IPR024448 This entry represents a family of metazoan xylosyltransferases, which includes xylosyltransferase 1 and xylosyltransferase 2 | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.8e-26 Score=183.13 Aligned_cols=56 Identities=45% Similarity=0.804 Sum_probs=54.9
Q ss_pred EEEEcCCcchhhhhhhccccCCCCCCcceEEEEeccccceEEEEEEECCCCceeee
Q psy12863 78 HLEVSSSYDQKEQMSRDFLHAIGPYSEPVLIHEWLTLVTHNITYLWIDPTNVLAAV 133 (150)
Q Consensus 78 ~~~vgtd~D~KE~i~Rnf~g~lgp~~ep~~~~~w~~~~~~~vtv~widP~~~ia~~ 133 (150)
++|||||||+||||||||||+|||+|+|+++|+|++|+++++||+||||.|+|||+
T Consensus 123 ~leVGTd~D~KE~ifRnf~gllgp~dep~~~~~w~~~~~~~~tv~WiDP~~~va~~ 178 (178)
T PF12529_consen 123 SLEVGTDWDPKEQIFRNFGGLLGPNDEPVLVQRWARGPNFNVTVVWIDPTGVVADT 178 (178)
T ss_pred EEEeecccCHHHHHHHhhccccCCCCceEEEEEEcCCCCceEEEEEECCCCccccC
Confidence 89999999999999999999999999999999999999999999999999999985
|
These enzymes initiate the biosynthesis of glycosaminoglycan chains in proteoglycans by transferring xylose from UDP-xylose to specific serine residues of the core protein [].; GO: 0030158 protein xylosyltransferase activity, 0006024 glycosaminoglycan biosynthetic process |
| >PLN03183 acetylglucosaminyltransferase family protein; Provisional | Back alignment and domain information |
|---|
| >KOG0799|consensus | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 150 | |||
| 2gak_A | 391 | Beta-1,6-N-acetylglucosaminyltransferase; glycopro | 6e-05 |
| >2gak_A Beta-1,6-N-acetylglucosaminyltransferase; glycoprotein, CIS-peptide, dimer; HET: NAG; 2.00A {Mus musculus} PDB: 2gam_A* 3otk_A* Length = 391 | Back alignment and structure |
|---|
Score = 41.0 bits (95), Expect = 6e-05
Identities = 13/84 (15%), Positives = 22/84 (26%), Gaps = 16/84 (19%)
Query: 2 YVLRNSVHCFSYIDNNLHITNWKRSLG--------CKCQYRHVVDWCGCSPNDFRSSDYS 53
++ + S ++ W+ G C HV C D
Sbjct: 298 SFPSSNKYDLSDMNAIARFVKWQYFEGDVSNGAPYPPCSGVHVRSVCVFGAGDLS----- 352
Query: 54 RLVATKGKQLYFARKFEPVVNQDI 77
+ FA KF+ V+
Sbjct: 353 ---WMLRQHHLFANKFDMDVDPFA 373
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 150 | |||
| 2gak_A | 391 | Beta-1,6-N-acetylglucosaminyltransferase; glycopro | 99.26 |
| >2gak_A Beta-1,6-N-acetylglucosaminyltransferase; glycoprotein, CIS-peptide, dimer; HET: NAG; 2.00A {Mus musculus} PDB: 2gam_A* 3otk_A* | Back alignment and structure |
|---|
Probab=99.26 E-value=1.1e-12 Score=112.29 Aligned_cols=69 Identities=23% Similarity=0.309 Sum_probs=56.7
Q ss_pred CeeeecCC----------cccccccCceeEEeccCCCC--------CccccceeeeccCCCCCCCCcchHHHHHhhcCCc
Q psy12863 1 RYVLRNSV----------HCFSYIDNNLHITNWKRSLG--------CKCQYRHVVDWCGCSPNDFRSSDYSRLVATKGKQ 62 (150)
Q Consensus 1 ~TvL~NS~----------fC~t~v~nNLR~tnW~Rk~G--------C~Cqyk~iVDWcGCSP~~fr~~D~~rl~~~~~~~ 62 (150)
||++.|+. |+.+.++.|||+++|.+..| ++||++|+++||. |..+|+.+|.+ ++
T Consensus 287 qTll~~~~~pg~~~~~~~~~~~~~~~~lr~i~W~~~~g~~~~G~p~p~c~~~~~~~~C~-----~~~~Dl~~l~~---s~ 358 (391)
T 2gak_A 287 ATIQRIPEVPGSFPSSNKYDLSDMNAIARFVKWQYFEGDVSNGAPYPPCSGVHVRSVCV-----FGAGDLSWMLR---QH 358 (391)
T ss_dssp HHHTTSTTSTTCCCSSGGGCBCTTTSSSEEECBTTTCSCGGGTCSSCCCSSEEETTEEE-----CCGGGHHHHTT---SC
T ss_pred HHHhhccCCCCccccccccccccccCceEEEEecccCCccccCCCCCCCccceecceee-----ecHHHHHHHHh---CC
Confidence 46666653 45666799999999986443 8999999999996 77889999987 89
Q ss_pred eeEEeccCcccccee
Q psy12863 63 LYFARKFEPVVNQDI 77 (150)
Q Consensus 63 ~fFARKFe~~v~qei 77 (150)
.+|||||++.++..|
T Consensus 359 ~lFARKF~~~~d~~~ 373 (391)
T 2gak_A 359 HLFANKFDMDVDPFA 373 (391)
T ss_dssp CSEEECCCTTTCHHH
T ss_pred CceEEccCCccCHHH
Confidence 999999999888765
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00