Psyllid ID: psy13024


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70-----
MAATVFVQPLDLIKNRMQLDKAKEYRSSIQAFTTILRKEGVFAMYNGLSAGLLRQATYTTTRLGTYNLLLNKFKA
cEEEEEcccHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHcc
ccEEEEEccHHHHHHHHHHccccccccHHHHHHHHHHHcccHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHcc
maatvfvqPLDLIKNRMQLDKAKEYRSSIQAFTTILRKEGVFAMYNGLSAGLLRQATYTTTRLGTYNLLLNKFKA
maatvfvqpldliknrmqlDKAKEYRSSIQAFTTILRKEGVFAMYNGLSAGLLRQATYTTTRLGTYNLLLNKFKA
MAATVFVQPLDLIKNRMQLDKAKEYRSSIQAFTTILRKEGVFAMYNGLSAGLLRQATYTTTRLGTYNLLLNKFKA
****VFVQPLDLIKNRMQLDKAKEYRSSIQAFTTILRKEGVFAMYNGLSAGLLRQATYTTTRLGTYNLLLNK***
MAATVFVQPLDLIKNRMQLDK**E*RSSIQAFTTILRKEGVFAMYNGLSAGLLRQATYTTTRLGTYNLLLNKFK*
MAATVFVQPLDLIKNRMQLDKAKEYRSSIQAFTTILRKEGVFAMYNGLSAGLLRQATYTTTRLGTYNLLLNKFKA
MAATVFVQPLDLIKNRMQLDKAKEYRSSIQAFTTILRKEGVFAMYNGLSAGLLRQATYTTTRLGTYNLLLNKFK*
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
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MAATVFVQPLDLIKNRMQLDKAKEYRSSIQAFTTILRKEGVFAMYNGLSAGLLRQATYTTTRLGTYNLLLNKFKA
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query75 2.2.26 [Sep-21-2011]
Q02978 314 Mitochondrial 2-oxoglutar yes N/A 0.96 0.229 0.631 9e-21
Q9CR62 314 Mitochondrial 2-oxoglutar yes N/A 0.96 0.229 0.631 9e-21
P22292 314 Mitochondrial 2-oxoglutar yes N/A 0.96 0.229 0.631 1e-20
P97700 314 Mitochondrial 2-oxoglutar yes N/A 0.96 0.229 0.618 4e-20
Q9C5M0 298 Mitochondrial dicarboxyla yes N/A 0.906 0.228 0.541 2e-13
Q54PY7 318 Probable mitochondrial 2- yes N/A 0.92 0.216 0.452 3e-10
Q06143 298 Mitochondrial dicarboxyla yes N/A 0.84 0.211 0.471 6e-09
Q6FTN2 295 Mitochondrial dicarboxyla yes N/A 0.893 0.227 0.444 1e-08
P0C582 331 Putative mitochondrial 2- N/A N/A 1.0 0.226 0.405 1e-08
Q6GQ22 291 Kidney mitochondrial carr N/A N/A 0.813 0.209 0.434 3e-08
>sp|Q02978|M2OM_HUMAN Mitochondrial 2-oxoglutarate/malate carrier protein OS=Homo sapiens GN=SLC25A11 PE=1 SV=3 Back     alignment and function desciption
 Score = 99.0 bits (245), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 48/76 (63%), Positives = 58/76 (76%), Gaps = 4/76 (5%)

Query: 1   MAATVFVQPLDLIKNRMQLD----KAKEYRSSIQAFTTILRKEGVFAMYNGLSAGLLRQA 56
           M ATVFVQPLDL+KNRMQL     K +EY++S  A T+IL+ EG+  +Y GLSAGLLRQA
Sbjct: 33  MGATVFVQPLDLVKNRMQLSGEGAKTREYKTSFHALTSILKAEGLRGIYTGLSAGLLRQA 92

Query: 57  TYTTTRLGTYNLLLNK 72
           TYTTTRLG Y +L  +
Sbjct: 93  TYTTTRLGIYTVLFER 108




Catalyzes the transport of 2-oxoglutarate across the inner mitochondrial membrane in an electroneutral exchange for malate or other dicarboxylic acids, and plays an important role in several metabolic processes, including the malate-aspartate shuttle, the oxoglutarate/isocitrate shuttle, in gluconeogenesis from lactate, and in nitrogen metabolism.
Homo sapiens (taxid: 9606)
>sp|Q9CR62|M2OM_MOUSE Mitochondrial 2-oxoglutarate/malate carrier protein OS=Mus musculus GN=Slc25a11 PE=1 SV=3 Back     alignment and function description
>sp|P22292|M2OM_BOVIN Mitochondrial 2-oxoglutarate/malate carrier protein OS=Bos taurus GN=SLC25A11 PE=1 SV=3 Back     alignment and function description
>sp|P97700|M2OM_RAT Mitochondrial 2-oxoglutarate/malate carrier protein OS=Rattus norvegicus GN=Slc25a11 PE=2 SV=3 Back     alignment and function description
>sp|Q9C5M0|DTC_ARATH Mitochondrial dicarboxylate/tricarboxylate transporter DTC OS=Arabidopsis thaliana GN=DTC PE=1 SV=1 Back     alignment and function description
>sp|Q54PY7|M2OM_DICDI Probable mitochondrial 2-oxoglutarate/malate carrier protein OS=Dictyostelium discoideum GN=ucpC PE=3 SV=1 Back     alignment and function description
>sp|Q06143|DIC1_YEAST Mitochondrial dicarboxylate transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DIC1 PE=1 SV=1 Back     alignment and function description
>sp|Q6FTN2|DIC1_CANGA Mitochondrial dicarboxylate transporter OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=DIC1 PE=3 SV=1 Back     alignment and function description
>sp|P0C582|M2OM_NEUCR Putative mitochondrial 2-oxoglutarate/malate carrier protein OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=NCU04792 PE=3 SV=1 Back     alignment and function description
>sp|Q6GQ22|KMCP1_XENLA Kidney mitochondrial carrier protein 1 OS=Xenopus laevis GN=slc25a30 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query75
32564064 306 Protein MISC-1 [Caenorhabditis elegans] 0.973 0.238 0.710 7e-23
341896814 306 CBN-MISC-1 protein [Caenorhabditis brenn 0.973 0.238 0.697 1e-22
268534058 307 Hypothetical protein CBG07018 [Caenorhab 0.973 0.237 0.697 1e-22
308487278 306 hypothetical protein CRE_17806 [Caenorha 0.973 0.238 0.697 1e-22
242013829 311 mitochondrial 2-oxoglutarate/malate carr 0.973 0.234 0.675 1e-21
318056060 308 mitochondrial 2-oxoglutarate/malate carr 0.973 0.237 0.662 7e-21
47207195 313 unnamed protein product [Tetraodon nigro 0.96 0.230 0.684 9e-21
156403117 307 predicted protein [Nematostella vectensi 0.986 0.241 0.653 2e-20
147905724 305 solute carrier family 25 member 11 [Xeno 0.973 0.239 0.662 2e-20
71895777 305 solute carrier family 25 (mitochondrial 0.973 0.239 0.662 3e-20
>gi|32564064|ref|NP_493694.2| Protein MISC-1 [Caenorhabditis elegans] gi|351018028|emb|CCD61938.1| Protein MISC-1 [Caenorhabditis elegans] Back     alignment and taxonomy information
 Score =  110 bits (276), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 54/76 (71%), Positives = 62/76 (81%), Gaps = 3/76 (3%)

Query: 1  MAATVFVQPLDLIKNRMQLDKA---KEYRSSIQAFTTILRKEGVFAMYNGLSAGLLRQAT 57
          M AT+ VQPLDL+KNRMQL      KEYRSS+ A T+I++ EGVFA+YNGLSAGLLRQAT
Sbjct: 21 MGATLVVQPLDLVKNRMQLSGTTGKKEYRSSMHALTSIMKNEGVFAVYNGLSAGLLRQAT 80

Query: 58 YTTTRLGTYNLLLNKF 73
          YTTTRLGTY  LL +F
Sbjct: 81 YTTTRLGTYAFLLERF 96




Source: Caenorhabditis elegans

Species: Caenorhabditis elegans

Genus: Caenorhabditis

Family: Rhabditidae

Order: Rhabditida

Class: Chromadorea

Phylum: Nematoda

Superkingdom: Eukaryota

>gi|341896814|gb|EGT52749.1| CBN-MISC-1 protein [Caenorhabditis brenneri] Back     alignment and taxonomy information
>gi|268534058|ref|XP_002632159.1| Hypothetical protein CBG07018 [Caenorhabditis briggsae] Back     alignment and taxonomy information
>gi|308487278|ref|XP_003105835.1| hypothetical protein CRE_17806 [Caenorhabditis remanei] gi|308255291|gb|EFO99243.1| hypothetical protein CRE_17806 [Caenorhabditis remanei] Back     alignment and taxonomy information
>gi|242013829|ref|XP_002427603.1| mitochondrial 2-oxoglutarate/malate carrier protein, putative [Pediculus humanus corporis] gi|212512018|gb|EEB14865.1| mitochondrial 2-oxoglutarate/malate carrier protein, putative [Pediculus humanus corporis] Back     alignment and taxonomy information
>gi|318056060|ref|NP_001188019.1| mitochondrial 2-oxoglutarate/malate carrier protein [Ictalurus punctatus] gi|308324609|gb|ADO29439.1| mitochondrial 2-oxoglutarate/malate carrier protein [Ictalurus punctatus] Back     alignment and taxonomy information
>gi|47207195|emb|CAF90256.1| unnamed protein product [Tetraodon nigroviridis] Back     alignment and taxonomy information
>gi|156403117|ref|XP_001639936.1| predicted protein [Nematostella vectensis] gi|156227067|gb|EDO47873.1| predicted protein [Nematostella vectensis] Back     alignment and taxonomy information
>gi|147905724|ref|NP_001090497.1| solute carrier family 25 member 11 [Xenopus laevis] gi|114108131|gb|AAI23334.1| MGC154791 protein [Xenopus laevis] Back     alignment and taxonomy information
>gi|71895777|ref|NP_001025683.1| solute carrier family 25 (mitochondrial carrier; oxoglutarate carrier), member 11 [Xenopus (Silurana) tropicalis] gi|62205006|gb|AAH93472.1| MGC97830 protein [Xenopus (Silurana) tropicalis] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query75
ZFIN|ZDB-GENE-040625-79 308 slc25a11 "solute carrier famil 0.96 0.233 0.657 3.5e-20
UNIPROTKB|E2R578 314 SLC25A11 "Uncharacterized prot 0.96 0.229 0.644 4.4e-20
UNIPROTKB|F1RFX9 307 SLC25A11 "Uncharacterized prot 0.96 0.234 0.644 4.4e-20
UNIPROTKB|I3L1P8 296 SLC25A11 "Mitochondrial 2-oxog 0.96 0.243 0.631 9.2e-20
UNIPROTKB|Q02978 314 SLC25A11 "Mitochondrial 2-oxog 0.96 0.229 0.631 9.2e-20
MGI|MGI:1915113 314 Slc25a11 "solute carrier famil 0.96 0.229 0.631 9.2e-20
UNIPROTKB|P22292 314 SLC25A11 "Mitochondrial 2-oxog 0.96 0.229 0.631 1.9e-19
RGD|708476 314 Slc25a11 "solute carrier famil 0.96 0.229 0.618 4e-19
UNIPROTKB|P97700 314 Slc25a11 "Mitochondrial 2-oxog 0.96 0.229 0.618 4e-19
FB|FBgn0039674 317 CG1907 [Drosophila melanogaste 0.986 0.233 0.564 1.6e-16
ZFIN|ZDB-GENE-040625-79 slc25a11 "solute carrier family 25 (mitochondrial carrier; oxoglutarate carrier), member 11" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
 Score = 239 (89.2 bits), Expect = 3.5e-20, P = 3.5e-20
 Identities = 50/76 (65%), Positives = 58/76 (76%)

Query:     1 MAATVFVQPLDLIKNRMQLD----KAKEYRSSIQAFTTILRKEGVFAMYNGLSAGLLRQA 56
             M ATVFVQPLDL+KNRMQL     KA+EY++S  A  +ILR EGV  +Y GLSAGLLRQA
Sbjct:    27 MGATVFVQPLDLVKNRMQLSGQGSKAREYKTSFHAVGSILRNEGVRGIYTGLSAGLLRQA 86

Query:    57 TYTTTRLGTYNLLLNK 72
             TYTTTRLG Y +L  +
Sbjct:    87 TYTTTRLGIYTILFER 102




GO:0006810 "transport" evidence=IEA
GO:0016020 "membrane" evidence=IEA
GO:0016021 "integral to membrane" evidence=IEA
UNIPROTKB|E2R578 SLC25A11 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|F1RFX9 SLC25A11 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|I3L1P8 SLC25A11 "Mitochondrial 2-oxoglutarate/malate carrier protein" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|Q02978 SLC25A11 "Mitochondrial 2-oxoglutarate/malate carrier protein" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
MGI|MGI:1915113 Slc25a11 "solute carrier family 25 (mitochondrial carrier oxoglutarate carrier), member 11" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|P22292 SLC25A11 "Mitochondrial 2-oxoglutarate/malate carrier protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
RGD|708476 Slc25a11 "solute carrier family 25 (mitochondrial carrier; oxoglutarate carrier), member 11" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|P97700 Slc25a11 "Mitochondrial 2-oxoglutarate/malate carrier protein" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
FB|FBgn0039674 CG1907 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9CR62M2OM_MOUSENo assigned EC number0.63150.960.2292yesN/A
P22292M2OM_BOVINNo assigned EC number0.63150.960.2292yesN/A
Q9C5M0DTC_ARATHNo assigned EC number0.54160.90660.2281yesN/A
P97700M2OM_RATNo assigned EC number0.61840.960.2292yesN/A
Q02978M2OM_HUMANNo assigned EC number0.63150.960.2292yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query75
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 9e-17
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
 Score = 67.3 bits (165), Expect = 9e-17
 Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 3/76 (3%)

Query: 1  MAATVFVQPLDLIKNRMQLDKAK---EYRSSIQAFTTILRKEGVFAMYNGLSAGLLRQAT 57
            A     PLD++K R+Q   A    +Y+  +  F  I ++EG+  +Y GL   LLR A 
Sbjct: 17 AIAATVTYPLDVVKTRLQSSAAGGSRKYKGILDCFKKIYKEEGIRGLYKGLLPNLLRVAP 76

Query: 58 YTTTRLGTYNLLLNKF 73
                GTY  L    
Sbjct: 77 AAAIYFGTYETLKKLL 92


Length = 96

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 75
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.88
KOG0764|consensus 299 99.85
KOG0752|consensus 320 99.85
KOG0752|consensus320 99.84
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 99.83
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 99.83
KOG0764|consensus299 99.83
KOG0754|consensus 294 99.8
KOG0753|consensus317 99.8
PTZ00168259 mitochondrial carrier protein; Provisional 99.79
KOG0759|consensus286 99.79
KOG0758|consensus297 99.78
KOG0751|consensus 694 99.78
KOG0758|consensus 297 99.78
KOG0759|consensus 286 99.77
PTZ00168259 mitochondrial carrier protein; Provisional 99.76
KOG0768|consensus 323 99.76
KOG0757|consensus 319 99.76
KOG0757|consensus319 99.75
KOG0768|consensus323 99.74
KOG0761|consensus 361 99.74
KOG0760|consensus 302 99.73
KOG0762|consensus 311 99.73
KOG0751|consensus694 99.72
KOG0753|consensus 317 99.72
KOG0769|consensus 308 99.72
KOG0762|consensus311 99.69
KOG0756|consensus299 99.68
KOG0761|consensus 361 99.68
KOG0760|consensus 302 99.67
KOG0770|consensus 353 99.64
KOG0765|consensus333 99.63
KOG0767|consensus 333 99.61
KOG0766|consensus297 99.61
KOG0754|consensus294 99.6
KOG0770|consensus 353 99.58
KOG0036|consensus463 99.56
KOG0767|consensus 333 99.56
KOG0765|consensus 333 99.56
KOG0749|consensus298 99.54
KOG0036|consensus463 99.53
KOG0749|consensus298 99.53
KOG0750|consensus304 99.53
KOG0763|consensus301 99.5
KOG0755|consensus320 99.49
KOG0756|consensus299 99.49
KOG0755|consensus320 99.47
KOG0766|consensus 297 99.46
KOG0763|consensus 301 99.42
KOG0750|consensus 304 99.38
KOG0769|consensus308 99.37
KOG2745|consensus321 99.08
KOG1519|consensus297 99.06
KOG2954|consensus427 98.94
KOG2745|consensus 321 97.75
KOG1519|consensus297 97.65
KOG2954|consensus 427 86.06
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
Probab=99.88  E-value=2.8e-22  Score=102.93  Aligned_cols=74  Identities=32%  Similarity=0.558  Sum_probs=66.3

Q ss_pred             chhhccccHHHHHHHHHh--c-CCCCCCCHHHHHHHHHHhhcHhHhhccchHhHHHHHHHhhhHHhHHHHHHHHHhC
Q psy13024          2 AATVFVQPLDLIKNRMQL--D-KAKEYRSSIQAFTTILRKEGVFAMYNGLSAGLLRQATYTTTRLGTYNLLLNKFKA   75 (75)
Q Consensus         2 ~~~~~~~P~d~~k~~~q~--~-~~~~~~~~~~~~~~~~~~~G~~gly~G~~~~~~~~~~~~~~~~~~~e~~~~~~~~   75 (75)
                      ++.++++|+|++|+|+|.  . ....+.+.++++++++++||++|+|+|+.+++++.+|..+++|++||.+++.+++
T Consensus        17 ~~~~~~~Pld~ik~~~q~~~~~~~~~~~~~~~~~~~i~~~~G~~~ly~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (95)
T PF00153_consen   17 ISTLVTYPLDTIKTRMQSESPSGKQPYQGVWQCLRKIYKEEGIRGLYRGFGPSLLRSIPYTAIYFGLYEYLKRLLSK   93 (95)
T ss_dssp             HHHHHCHHHHHHHHHHHCCSCCCCSS-SSHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHhHHHHHhHhhcccccccccccccccccccccchhhhhccccCChHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            467899999999999992  2 3467889999999999999999999999999999999999999999999998863



Such proteins include: ADP, ATP carrier protein (ADP/ATP translocase); 2-oxoglutarate/malate carrier protein; phosphate carrier protein; tricarboxylate transport protein (or citrate transport protein); Graves disease carrier protein; yeast mitochondrial proteins MRS3 and MRS4; yeast mitochondrial FAD carrier protein; and many others. Structurally, these proteins can consist of up to three tandem repeats of a domain of approximately 100 residues, each domain containing two transmembrane regions.; PDB: 2LCK_A 2C3E_A 1OKC_A.

>KOG0764|consensus Back     alignment and domain information
>KOG0752|consensus Back     alignment and domain information
>KOG0752|consensus Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0764|consensus Back     alignment and domain information
>KOG0754|consensus Back     alignment and domain information
>KOG0753|consensus Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0759|consensus Back     alignment and domain information
>KOG0758|consensus Back     alignment and domain information
>KOG0751|consensus Back     alignment and domain information
>KOG0758|consensus Back     alignment and domain information
>KOG0759|consensus Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0768|consensus Back     alignment and domain information
>KOG0757|consensus Back     alignment and domain information
>KOG0757|consensus Back     alignment and domain information
>KOG0768|consensus Back     alignment and domain information
>KOG0761|consensus Back     alignment and domain information
>KOG0760|consensus Back     alignment and domain information
>KOG0762|consensus Back     alignment and domain information
>KOG0751|consensus Back     alignment and domain information
>KOG0753|consensus Back     alignment and domain information
>KOG0769|consensus Back     alignment and domain information
>KOG0762|consensus Back     alignment and domain information
>KOG0756|consensus Back     alignment and domain information
>KOG0761|consensus Back     alignment and domain information
>KOG0760|consensus Back     alignment and domain information
>KOG0770|consensus Back     alignment and domain information
>KOG0765|consensus Back     alignment and domain information
>KOG0767|consensus Back     alignment and domain information
>KOG0766|consensus Back     alignment and domain information
>KOG0754|consensus Back     alignment and domain information
>KOG0770|consensus Back     alignment and domain information
>KOG0036|consensus Back     alignment and domain information
>KOG0767|consensus Back     alignment and domain information
>KOG0765|consensus Back     alignment and domain information
>KOG0749|consensus Back     alignment and domain information
>KOG0036|consensus Back     alignment and domain information
>KOG0749|consensus Back     alignment and domain information
>KOG0750|consensus Back     alignment and domain information
>KOG0763|consensus Back     alignment and domain information
>KOG0755|consensus Back     alignment and domain information
>KOG0756|consensus Back     alignment and domain information
>KOG0755|consensus Back     alignment and domain information
>KOG0766|consensus Back     alignment and domain information
>KOG0763|consensus Back     alignment and domain information
>KOG0750|consensus Back     alignment and domain information
>KOG0769|consensus Back     alignment and domain information
>KOG2745|consensus Back     alignment and domain information
>KOG1519|consensus Back     alignment and domain information
>KOG2954|consensus Back     alignment and domain information
>KOG2745|consensus Back     alignment and domain information
>KOG1519|consensus Back     alignment and domain information
>KOG2954|consensus Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query75
2lck_A 303 Structure Of The Mitochondrial Uncoupling Protein 2 1e-06
>pdb|2LCK|A Chain A, Structure Of The Mitochondrial Uncoupling Protein 2 Determined By Nmr Molecular Fragment Replacement Length = 303 Back     alignment and structure

Iteration: 1

Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 4/71 (5%) Query: 3 ATVFVQPLDLIKNRMQLDK----AKEYRSSIQAFTTILRKEGVFAMYNGLSAGLLRQATY 58 A QP D++K R Q + Y+S+++A+ TI R+EG+ ++ G S + R A Sbjct: 118 AVAVAQPTDVVKVRFQAQARAGGGRRYQSTVEAYKTIAREEGIRGLWKGTSPNVARNAIV 177 Query: 59 TTTRLGTYNLL 69 L TY+L+ Sbjct: 178 NCAELVTYDLI 188

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query75
2lck_A 303 Mitochondrial uncoupling protein 2; membrane prote 3e-26
2lck_A 303 Mitochondrial uncoupling protein 2; membrane prote 1e-13
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 2e-13
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 1e-11
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 6e-10
1okc_A 297 ADP, ATP carrier protein heart isoform T1; mitocho 4e-07
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
 Score = 96.2 bits (240), Expect = 3e-26
 Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 10/84 (11%)

Query: 1  MAATVFVQPLDLIKNRMQL----------DKAKEYRSSIQAFTTILRKEGVFAMYNGLSA 50
            A +   PLD  K R+Q+            + +YR  +    T++R EG  ++YNGL A
Sbjct: 13 CIADLITFPLDTAKVRLQIQGESQGLVRTAASAQYRGVLGTILTMVRTEGPRSLYNGLVA 72

Query: 51 GLLRQATYTTTRLGTYNLLLNKFK 74
          GL RQ ++ + R+G Y+ +   + 
Sbjct: 73 GLQRQMSFASVRIGLYDSVKQFYT 96


>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query75
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 99.87
2lck_A 303 Mitochondrial uncoupling protein 2; membrane prote 99.85
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 99.85
1okc_A 297 ADP, ATP carrier protein heart isoform T1; mitocho 99.83
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure
Probab=99.87  E-value=4.6e-23  Score=122.82  Aligned_cols=73  Identities=30%  Similarity=0.474  Sum_probs=67.6

Q ss_pred             chhhccccHHHHHHHHHhcCCCCCCCHHHHHHHHHHhhcHhHhhccchHhHHHHHHHhhhHHhHHHHHHHHHh
Q psy13024          2 AATVFVQPLDLIKNRMQLDKAKEYRSSIQAFTTILRKEGVFAMYNGLSAGLLRQATYTTTRLGTYNLLLNKFK   74 (75)
Q Consensus         2 ~~~~~~~P~d~~k~~~q~~~~~~~~~~~~~~~~~~~~~G~~gly~G~~~~~~~~~~~~~~~~~~~e~~~~~~~   74 (75)
                      +++++++|+|++|+|+|.+....|.+.++++++++++||++|||||+.++++|.+|.++++|.+||.+++.+.
T Consensus       215 ~~~~~~~P~dvvktrlq~~~~~~y~~~~~~~~~i~~~eG~~glyrG~~~~~~r~~p~~~i~f~~ye~~k~~l~  287 (303)
T 2lck_A          215 CTTVIASPVDVVKTRYMNSALGQYHSAGHCALTMLRKEGPRAFYKGFMPSFLRLGSWNVVMFVTYEQLKRALM  287 (303)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCSSSCCSHHHHHHHHHHSSCTHHHHSCCHHHHHHHHHHHHHHHHHHHHHHSCCC
T ss_pred             HHHHHcCHHHHHHHHHHhccccccCCHHHHHHHHHHHcChHHhhccHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence            4678899999999999998666799999999999999999999999999999999999999999999987653



>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 75
d1okca_ 292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 8e-08
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 2e-07
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]
 Score = 45.1 bits (105), Expect = 8e-08
 Identities = 14/80 (17%), Positives = 30/80 (37%), Gaps = 7/80 (8%)

Query: 1  MAATVFVQPLDLIKNRMQLDKA-------KEYRSSIQAFTTILRKEGVFAMYNGLSAGLL 53
            +   V P++ +K  +Q+  A       K+Y+  I     I +++G  + + G  A ++
Sbjct: 18 AISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVI 77

Query: 54 RQATYTTTRLGTYNLLLNKF 73
          R            +     F
Sbjct: 78 RYFPTQALNFAFKDKYKQIF 97


>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query75
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 99.81
d1okca_ 292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 99.77
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure
class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]
Probab=99.81  E-value=1.1e-20  Score=110.00  Aligned_cols=66  Identities=23%  Similarity=0.403  Sum_probs=58.8

Q ss_pred             chhhccccHHHHHHHHHhcCC-----CCCCCHHHHHHHHHHhhcHhHhhccchHhHHHHHHHhhhHHhHHHH
Q psy13024          2 AATVFVQPLDLIKNRMQLDKA-----KEYRSSIQAFTTILRKEGVFAMYNGLSAGLLRQATYTTTRLGTYNL   68 (75)
Q Consensus         2 ~~~~~~~P~d~~k~~~q~~~~-----~~~~~~~~~~~~~~~~~G~~gly~G~~~~~~~~~~~~~~~~~~~e~   68 (75)
                      +++++++|+|++|+|+|.+..     ..|.++++++++++++||++|||||+.+++++.+| +++.|.+||.
T Consensus       221 ~a~~~t~P~dvvktR~q~~~~~~~~~~~y~~~~~~~~~i~~~eG~~~lyrG~~~~~~r~i~-~~i~~~~ye~  291 (292)
T d1okca_         221 VAGLVSYPFDTVRRRMMMQSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMG-GAFVLVLYDE  291 (292)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTTCCGGGCSCSSHHHHHHHHHHHHCGGGGGTTHHHHHHHHHH-HHHHHHHHHT
T ss_pred             HHhhccccHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhcCcCcccccHHHHHHHHHH-HHhhhhHhhc
Confidence            467889999999999999832     35789999999999999999999999999999766 6899999996



>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure