Psyllid ID: psy13183

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190--
TFDSKEDFDKKIKVLSEWIDKAKHVVLHTGAGISTSAGIPDFRGPNGVWTLEKKGIKPKVNISFDDAVPTVTHMAILELVNQGKVHYVVSQNIDGLHLRSGLSRKYLAELHGNMYVDQCNKCERQFVRKSATNSVGQKNLNIPCPYRGFRPCRGTLHDTILDWEHNLPQKDINMGDYNSSIADLSIIESKRG
ccccHHHHHHHHHHHHHHHHHcccEEEEEccccccccccccccccccccccccccccccccEEcccccccHHHHHHHHHHHcccccEEEEccccHHHHHcccccccEEEEcccccccccccccccccHHHHHHHHcccccccccccccccccccEEcccEEEccccccHHHHHHHHHHHHHccEEEEEcccc
ccccHHHHHHHHHHHHHHHcccccEEEEEcHHHcHHHcccccccccccccHHHHccccccEEEHHcccccHHHHHHHHHHHcccEEEEEEEccccHHHHcccccccEEEEccccEEHHHHHcccEcccHHHHHHccccccccccccccccccccEEcccEEEccccccHHHHHHHHHHHHHccEEEEEEccc
TFDSKEDFDKKIKVLSEWIDKAKHVVLHtgagistsagipdfrgpngvwtlekkgikpkvnisfddavpTVTHMAILELVNQGKVHYVVSQnidglhlrsgLSRKYLAELHGnmyvdqcnkcERQFVRksatnsvgqknlnipcpyrgfrpcrgtlhdtildwehnlpqkdinmgdynssiadLSIIESKRG
tfdskedfdkKIKVLSEWIDKAKHVVLHTgagistsagipdfrgPNGVWTLekkgikpkvniSFDDAVPTVTHMAILELVNQGKVHYVVSQNIDGLHLRSGLSRKYLAELHGNMYVDQCNKCERQFVRKsatnsvgqknlnipcpyrgFRPCRGTLHDTILDWEHNLPqkdinmgdynssiadlsiieskrg
TFDSKEDFDKKIKVLSEWIDKAKHVVLHTGAGISTSAGIPDFRGPNGVWTLEKKGIKPKVNISFDDAVPTVTHMAILELVNQGKVHYVVSQNIDGLHLRSGLSRKYLAELHGNMYVDQCNKCERQFVRKSATNSVGQKNLNIPCPYRGFRPCRGTLHDTILDWEHNLPQKDINMGDYNSSIADLSIIESKRG
**********KIKVLSEWIDKAKHVVLHTGAGISTSAGIPDFRGPNGVWTLEKKGIKPKVNISFDDAVPTVTHMAILELVNQGKVHYVVSQNIDGLHLRSGLSRKYLAELHGNMYVDQCNKCERQFVRKSATNSVGQKNLNIPCPYRGFRPCRGTLHDTILDWEHNLPQKDINMGDYN**I***********
*FDSKEDFDKKIKVLSEWIDKAKHVVLHTGAGISTSAGIPDFRGPNGVWTLEKKGIKPKVNISFDDAVPTVTHMAILELVNQGKVHYVVSQNIDGLHLRSGLSRKYLAELHGNMYVDQCNKCERQFVRKSATNSVGQKNLNIPCPYRGFRPCRGTLHDTILDWEHNLPQKDINMGDYNSSIADLSIIESKRG
********DKKIKVLSEWIDKAKHVVLHTGAGISTSAGIPDFRGPNGVWTLEKKGIKPKVNISFDDAVPTVTHMAILELVNQGKVHYVVSQNIDGLHLRSGLSRKYLAELHGNMYVDQCNKCERQFVRKSATNSVGQKNLNIPCPYRGFRPCRGTLHDTILDWEHNLPQKDINMGDYNSSIADLSIIESKRG
TFDSKEDFDKKIKVLSEWIDKAKHVVLHTGAGISTSAGIPDFRGPNGVWTLEKKGIKPKVNISFDDAVPTVTHMAILELVNQGKVHYVVSQNIDGLHLRSGLSRKYLAELHGNMYVDQCNKCERQFVRKSATNSVGQKNLNIPCPYRGFRPCRGTLHDTILDWEHNLPQKDINMGDYNSSIADLSIIESKR*
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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TFDSKEDFDKKIKVLSEWIDKAKHVVLHTGAGISTSAGIPDFRGPNGVWTLEKKGIKPKVNISFDDAVPTVTHMAILELVNQGKVHYVVSQNIDGLHLRSGLSRKYLAELHGNMYVDQCNKCERQFVRKSATNSVGQKNLNIPCPYRGFRPCRGTLHDTILDWEHNLPQKDINMGDYNSSIADLSIIESKRG
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query192 2.2.26 [Sep-21-2011]
Q9VH08317 NAD-dependent protein dea yes N/A 0.963 0.583 0.617 7e-64
Q8N6T7 355 NAD-dependent protein dea yes N/A 0.963 0.521 0.505 1e-53
P59941 334 NAD-dependent protein dea yes N/A 0.963 0.553 0.494 4e-53
B8ARK7 484 NAD-dependent protein dea N/A N/A 0.947 0.376 0.454 2e-43
Q9FE17 473 NAD-dependent protein dea yes N/A 0.947 0.384 0.440 6e-43
Q8BKJ9 402 NAD-dependent protein dea no N/A 0.651 0.310 0.523 2e-33
B2RZ55 402 NAD-dependent protein dea no N/A 0.651 0.310 0.515 5e-33
Q0P595 400 NAD-dependent protein dea no N/A 0.812 0.39 0.459 6e-33
Q9NRC8 400 NAD-dependent protein dea no N/A 0.651 0.312 0.515 7e-32
Q9VAQ1 771 NAD-dependent protein dea no N/A 0.791 0.197 0.442 4e-29
>sp|Q9VH08|SIR6_DROME NAD-dependent protein deacetylase Sirt6 OS=Drosophila melanogaster GN=Sirt6 PE=2 SV=1 Back     alignment and function desciption
 Score =  243 bits (619), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 118/191 (61%), Positives = 146/191 (76%), Gaps = 6/191 (3%)

Query: 1   TFDSKEDFDKKIKVLSEWIDKAKHVVLHTGAGISTSAGIPDFRGPNGVWTLEKKGIKPKV 60
           +FDS E   +K + L+E I K+ HVVLHTGAGISTSAGIPDFRGP GVWTLE+KG KP  
Sbjct: 23  SFDSDEVVAEKCQELAELIKKSGHVVLHTGAGISTSAGIPDFRGPKGVWTLEEKGEKPDF 82

Query: 61  NISFDDAVPTVTHMAILELVNQGKVHYVVSQNIDGLHLRSGLSRKYLAELHGNMYVDQCN 120
           N+SFD+A PT THMAI+ L+  G V YV+SQNIDGLHL+SGL RKYL+ELHGN+Y++QC 
Sbjct: 83  NVSFDEARPTKTHMAIIALIESGYVQYVISQNIDGLHLKSGLDRKYLSELHGNIYIEQCK 142

Query: 121 KCERQFVRKSATNSVGQKNLNIPCP----YRGFRPCR-GTLHDTILDWEHNLPQKDINMG 175
           KC RQFV  SA  +VGQK+L   C      +G R CR G L+D +LDWEH+LP+ D+ MG
Sbjct: 143 KCRRQFVSPSAVETVGQKSLQRACKSSMDSKG-RSCRSGILYDNVLDWEHDLPENDLEMG 201

Query: 176 DYNSSIADLSI 186
             +S++ADL+I
Sbjct: 202 VMHSTVADLNI 212
NAD-dependent protein deacetylase (By similarity). May be involved in the regulation of life span.
Drosophila melanogaster (taxid: 7227)
EC: 3EC: .EC: 5EC: .EC: 1EC: .EC: -
>sp|Q8N6T7|SIR6_HUMAN NAD-dependent protein deacetylase sirtuin-6 OS=Homo sapiens GN=SIRT6 PE=1 SV=2 Back     alignment and function description
>sp|P59941|SIR6_MOUSE NAD-dependent protein deacetylase sirtuin-6 OS=Mus musculus GN=Sirt6 PE=1 SV=1 Back     alignment and function description
>sp|B8ARK7|SIR1_ORYSI NAD-dependent protein deacetylase SRT1 OS=Oryza sativa subsp. indica GN=SRT1 PE=2 SV=1 Back     alignment and function description
>sp|Q9FE17|SIR1_ARATH NAD-dependent protein deacetylase SRT1 OS=Arabidopsis thaliana GN=SRT1 PE=2 SV=1 Back     alignment and function description
>sp|Q8BKJ9|SIR7_MOUSE NAD-dependent protein deacetylase sirtuin-7 OS=Mus musculus GN=Sirt7 PE=1 SV=2 Back     alignment and function description
>sp|B2RZ55|SIR7_RAT NAD-dependent protein deacetylase sirtuin-7 OS=Rattus norvegicus GN=Sirt7 PE=2 SV=1 Back     alignment and function description
>sp|Q0P595|SIR7_BOVIN NAD-dependent protein deacetylase sirtuin-7 OS=Bos taurus GN=SIRT7 PE=2 SV=1 Back     alignment and function description
>sp|Q9NRC8|SIR7_HUMAN NAD-dependent protein deacetylase sirtuin-7 OS=Homo sapiens GN=SIRT7 PE=1 SV=1 Back     alignment and function description
>sp|Q9VAQ1|SIR7_DROME NAD-dependent protein deacetylase Sirt7 OS=Drosophila melanogaster GN=Sirt7 PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query192
242016288 853 chromatin regulatory protein sir2, putat 0.963 0.216 0.652 1e-69
91077210 338 PREDICTED: similar to chromatin regulato 0.958 0.544 0.673 1e-69
340711968 407 PREDICTED: NAD-dependent deacetylase sir 0.963 0.454 0.636 2e-68
350402530 407 PREDICTED: NAD-dependent deacetylase sir 0.963 0.454 0.636 2e-68
380030213 407 PREDICTED: NAD-dependent deacetylase sir 0.963 0.454 0.636 3e-68
66513399 407 PREDICTED: NAD-dependent deacetylase sir 0.963 0.454 0.636 3e-68
383859069 406 PREDICTED: NAD-dependent deacetylase sir 0.963 0.455 0.636 3e-68
156546904 403 PREDICTED: NAD-dependent deacetylase sir 0.963 0.459 0.631 8e-68
307211057 407 Mono-ADP-ribosyltransferase sirtuin-6 [H 0.963 0.454 0.625 1e-67
307174939 404 Mono-ADP-ribosyltransferase sirtuin-6 [C 0.963 0.457 0.620 6e-67
>gi|242016288|ref|XP_002428761.1| chromatin regulatory protein sir2, putative [Pediculus humanus corporis] gi|212513446|gb|EEB16023.1| chromatin regulatory protein sir2, putative [Pediculus humanus corporis] Back     alignment and taxonomy information
 Score =  268 bits (684), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 122/187 (65%), Positives = 148/187 (79%), Gaps = 2/187 (1%)

Query: 2   FDSKEDFDKKIKVLSEWIDKAKHVVLHTGAGISTSAGIPDFRGPNGVWTLEKKGIKPKVN 61
           FD K     K+ +L++WI++A HVV+HTGAGISTSAGIPDFRGP GVWTL+ KG KP ++
Sbjct: 24  FDIKSVVSAKVSLLAKWINEANHVVIHTGAGISTSAGIPDFRGPRGVWTLQAKGEKPDLS 83

Query: 62  ISFDDAVPTVTHMAILELVNQGKVHYVVSQNIDGLHLRSGLSRKYLAELHGNMYVDQCNK 121
             F++A+PTVTHMAI++LV + KV YVVSQNIDGLHLRS L RKYL+ELHGNM+ +QCN 
Sbjct: 84  KDFNEAIPTVTHMAIMKLVEKQKVKYVVSQNIDGLHLRSNLRRKYLSELHGNMFTEQCNS 143

Query: 122 CERQFVRKSATNSVGQKNLNIPCPYRGF--RPCRGTLHDTILDWEHNLPQKDINMGDYNS 179
           C RQFVR S   +VGQK++N  CP      RPCRG LHDTILDWEHNLP+ D+ M DY+S
Sbjct: 144 CNRQFVRSSPVPTVGQKSINKNCPATKANGRPCRGRLHDTILDWEHNLPENDLGMADYHS 203

Query: 180 SIADLSI 186
            +ADLSI
Sbjct: 204 CLADLSI 210

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|91077210|ref|XP_973096.1| PREDICTED: similar to chromatin regulatory protein sir2 [Tribolium castaneum] gi|270002055|gb|EEZ98502.1| hypothetical protein TcasGA2_TC001003 [Tribolium castaneum] Back     alignment and taxonomy information
>gi|340711968|ref|XP_003394537.1| PREDICTED: NAD-dependent deacetylase sirtuin-6-like [Bombus terrestris] Back     alignment and taxonomy information
>gi|350402530|ref|XP_003486518.1| PREDICTED: NAD-dependent deacetylase sirtuin-6-like [Bombus impatiens] Back     alignment and taxonomy information
>gi|380030213|ref|XP_003698748.1| PREDICTED: NAD-dependent deacetylase sirtuin-6-like [Apis florea] Back     alignment and taxonomy information
>gi|66513399|ref|XP_396298.2| PREDICTED: NAD-dependent deacetylase sirtuin-6 [Apis mellifera] Back     alignment and taxonomy information
>gi|383859069|ref|XP_003705020.1| PREDICTED: NAD-dependent deacetylase sirtuin-6-like [Megachile rotundata] Back     alignment and taxonomy information
>gi|156546904|ref|XP_001599869.1| PREDICTED: NAD-dependent deacetylase sirtuin-6-like isoform 1 [Nasonia vitripennis] gi|345483869|ref|XP_003424899.1| PREDICTED: NAD-dependent deacetylase sirtuin-6-like isoform 2 [Nasonia vitripennis] Back     alignment and taxonomy information
>gi|307211057|gb|EFN87309.1| Mono-ADP-ribosyltransferase sirtuin-6 [Harpegnathos saltator] Back     alignment and taxonomy information
>gi|307174939|gb|EFN65179.1| Mono-ADP-ribosyltransferase sirtuin-6 [Camponotus floridanus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query192
FB|FBgn0037802317 Sirt6 "Sirt6" [Drosophila mela 0.963 0.583 0.617 1e-59
ZFIN|ZDB-GENE-031007-2 354 sirt6 "sirtuin (silent mating 0.968 0.525 0.502 4e-51
UNIPROTKB|A5D7K6 359 SIRT6 "SIRT6 protein" [Bos tau 0.963 0.515 0.510 5.8e-50
UNIPROTKB|F1P0C4 357 SIRT6 "Uncharacterized protein 0.963 0.518 0.515 7.4e-50
UNIPROTKB|E2QXD9 361 SIRT6 "Uncharacterized protein 0.963 0.512 0.505 3.2e-49
UNIPROTKB|Q8N6T7 355 SIRT6 "NAD-dependent protein d 0.963 0.521 0.505 5.2e-49
MGI|MGI:1354161 334 Sirt6 "sirtuin 6 (silent matin 0.963 0.553 0.494 1.4e-48
RGD|1305216 330 Sirt6 "sirtuin 6" [Rattus norv 0.963 0.560 0.5 2.3e-48
UNIPROTKB|F1S7P1 359 SIRT6 "Uncharacterized protein 0.963 0.515 0.468 2.4e-44
UNIPROTKB|F1S7M5 328 SIRT6 "Uncharacterized protein 0.963 0.564 0.462 5e-44
FB|FBgn0037802 Sirt6 "Sirt6" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 612 (220.5 bits), Expect = 1.0e-59, P = 1.0e-59
 Identities = 118/191 (61%), Positives = 146/191 (76%)

Query:     1 TFDSKEDFDKKIKVLSEWIDKAKHVVLHTGAGISTSAGIPDFRGPNGVWTLEKKGIKPKV 60
             +FDS E   +K + L+E I K+ HVVLHTGAGISTSAGIPDFRGP GVWTLE+KG KP  
Sbjct:    23 SFDSDEVVAEKCQELAELIKKSGHVVLHTGAGISTSAGIPDFRGPKGVWTLEEKGEKPDF 82

Query:    61 NISFDDAVPTVTHMAILELVNQGKVHYVVSQNIDGLHLRSGLSRKYLAELHGNMYVDQCN 120
             N+SFD+A PT THMAI+ L+  G V YV+SQNIDGLHL+SGL RKYL+ELHGN+Y++QC 
Sbjct:    83 NVSFDEARPTKTHMAIIALIESGYVQYVISQNIDGLHLKSGLDRKYLSELHGNIYIEQCK 142

Query:   121 KCERQFVRKSATNSVGQKNLNIPCPY----RGFRPCR-GTLHDTILDWEHNLPQKDINMG 175
             KC RQFV  SA  +VGQK+L   C      +G R CR G L+D +LDWEH+LP+ D+ MG
Sbjct:   143 KCRRQFVSPSAVETVGQKSLQRACKSSMDSKG-RSCRSGILYDNVLDWEHDLPENDLEMG 201

Query:   176 DYNSSIADLSI 186
               +S++ADL+I
Sbjct:   202 VMHSTVADLNI 212
GO:0070403 "NAD+ binding" evidence=IEA
GO:0008340 "determination of adult lifespan" evidence=IMP
ZFIN|ZDB-GENE-031007-2 sirt6 "sirtuin (silent mating type information regulation 2 homolog) 6 (S. cerevisiae)" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|A5D7K6 SIRT6 "SIRT6 protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F1P0C4 SIRT6 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|E2QXD9 SIRT6 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|Q8N6T7 SIRT6 "NAD-dependent protein deacetylase sirtuin-6" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
MGI|MGI:1354161 Sirt6 "sirtuin 6 (silent mating type information regulation 2, homolog) 6 (S. cerevisiae)" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|1305216 Sirt6 "sirtuin 6" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|F1S7P1 SIRT6 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|F1S7M5 SIRT6 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
B5YJW3NPD_THEYD3, ., 5, ., 1, ., -0.30960.90100.6757yesN/A
O58669NPD_PYRHO3, ., 5, ., 1, ., -0.31570.84890.6546yesN/A
Q9VH08SIR6_DROME3, ., 5, ., 1, ., -0.61780.96350.5835yesN/A
Q73KE1NPD_TREDE3, ., 5, ., 1, ., -0.30040.8750.6693yesN/A
Q8N6T7SIR6_HUMAN3, ., 5, ., 1, ., -0.50530.96350.5211yesN/A

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.5.10.691

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query192
cd01410206 cd01410, SIRT7, SIRT7: Eukaryotic and prokaryotic 2e-69
cd01407218 cd01407, SIR2-fam, SIR2 family of proteins include 2e-46
cd00296222 cd00296, SIR2, SIR2 superfamily of proteins includ 8e-41
COG0846250 COG0846, SIR2, NAD-dependent protein deacetylases, 4e-30
PRK00481242 PRK00481, PRK00481, NAD-dependent deacetylase; Pro 3e-28
cd01411225 cd01411, SIR2H, SIR2H: Uncharacterized prokaryotic 4e-27
cd01413222 cd01413, SIR2_Af2, SIR2_Af2: Archaeal and prokaryo 1e-26
PRK14138244 PRK14138, PRK14138, NAD-dependent deacetylase; Pro 2e-25
pfam02146177 pfam02146, SIR2, Sir2 family 6e-23
cd01409260 cd01409, SIRT4, SIRT4: Eukaryotic and prokaryotic 6e-23
cd01412224 cd01412, SIRT5_Af1_CobB, SIRT5_Af1_CobB: Eukaryoti 1e-17
PRK05333285 PRK05333, PRK05333, NAD-dependent deacetylase; Pro 9e-17
cd01408235 cd01408, SIRT1, SIRT1: Eukaryotic group (class1) w 2e-16
PTZ00409271 PTZ00409, PTZ00409, Sir2 (Silent Information Regul 3e-15
PTZ00408242 PTZ00408, PTZ00408, NAD-dependent deacetylase; Pro 1e-11
PTZ00410 349 PTZ00410, PTZ00410, NAD-dependent SIR2; Provisiona 1e-10
>gnl|CDD|238701 cd01410, SIRT7, SIRT7: Eukaryotic and prokaryotic group (class4) which includes human sirtuin SIRT6, SIRT7, and several bacterial homologs; and are members of the SIR2 family of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation Back     alignment and domain information 
 Score =  209 bits (534), Expect = 2e-69
 Identities = 77/165 (46%), Positives = 103/165 (62%), Gaps = 6/165 (3%)

Query: 23  KHVVLHTGAGISTSAGIPDFRGPNGVWTLEK-KGIKPKVNISFDDAVPTVTHMAILELVN 81
           KH+V+ TGAGISTSAGIPDFRGPNGVWTL      + + +  F  A PT+THMA++EL  
Sbjct: 1   KHLVVFTGAGISTSAGIPDFRGPNGVWTLLPEDKGRRRFSWRFRRAEPTLTHMALVELER 60

Query: 82  QGKVHYVVSQNIDGLHLRSGLSRKYLAELHGNMYVDQCNKCERQFVRKSATNSVGQKNLN 141
            G + +V+SQN+DGLHLRSGL R+ L+ELHGNM+++ C  C  ++VR     + G K   
Sbjct: 61  AGLLKFVISQNVDGLHLRSGLPREKLSELHGNMFIEVCKSCGPEYVRDDVVETRGDKETG 120

Query: 142 IPCPYRGFRPCRGTLHDTILDWEHNLPQKDINMGDYNSSIADLSI 186
             C       C G L DTI+D+   LP ++       +  ADL +
Sbjct: 121 RRCH-----ACGGILKDTIVDFGERLPPENWMGAAAAACRADLFL 160

Sir2 proteins have been shown to regulate gene silencing, DNA repair, metabolic enzymes, and life span. Length = 206
>gnl|CDD|238698 cd01407, SIR2-fam, SIR2 family of proteins includes silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation, where the acetyl group from the lysine epsilon-amino group is transferred to the ADP-ribose moiety of NAD+, producing nicotinamide and the novel metabolite O-acetyl-ADP-ribose Back     alignment and domain information
>gnl|CDD|238184 cd00296, SIR2, SIR2 superfamily of proteins includes silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation, where the acetyl group from the lysine epsilon-amino group is transferred to the ADP-ribose moiety of NAD+, producing nicotinamide and the novel metabolite O-acetyl-ADP-ribose Back     alignment and domain information
>gnl|CDD|223915 COG0846, SIR2, NAD-dependent protein deacetylases, SIR2 family [Transcription] Back     alignment and domain information
>gnl|CDD|234777 PRK00481, PRK00481, NAD-dependent deacetylase; Provisional Back     alignment and domain information
>gnl|CDD|238702 cd01411, SIR2H, SIR2H: Uncharacterized prokaryotic Sir2 homologs from several gram positive bacterial species and Fusobacteria; and are members of the SIR2 family of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation Back     alignment and domain information
>gnl|CDD|238704 cd01413, SIR2_Af2, SIR2_Af2: Archaeal and prokaryotic group which includes Archaeoglobus fulgidus Sir2-Af2, Sulfolobus solfataricus ssSir2, and several bacterial homologs; and are members of the SIR2 family of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation Back     alignment and domain information
>gnl|CDD|172627 PRK14138, PRK14138, NAD-dependent deacetylase; Provisional Back     alignment and domain information
>gnl|CDD|216902 pfam02146, SIR2, Sir2 family Back     alignment and domain information
>gnl|CDD|238700 cd01409, SIRT4, SIRT4: Eukaryotic and prokaryotic group (class2) which includes human sirtuin SIRT4 and several bacterial homologs; and are members of the SIR2 family of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation Back     alignment and domain information
>gnl|CDD|238703 cd01412, SIRT5_Af1_CobB, SIRT5_Af1_CobB: Eukaryotic, archaeal and prokaryotic group (class3) which includes human sirtuin SIRT5, Archaeoglobus fulgidus Sir2-Af1, and E Back     alignment and domain information
>gnl|CDD|235415 PRK05333, PRK05333, NAD-dependent deacetylase; Provisional Back     alignment and domain information
>gnl|CDD|238699 cd01408, SIRT1, SIRT1: Eukaryotic group (class1) which includes human sirtuins SIRT1-3 and yeast Hst1-4; and are members of the SIR2 family of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation Back     alignment and domain information
>gnl|CDD|173599 PTZ00409, PTZ00409, Sir2 (Silent Information Regulator) protein; Provisional Back     alignment and domain information
>gnl|CDD|240405 PTZ00408, PTZ00408, NAD-dependent deacetylase; Provisional Back     alignment and domain information
>gnl|CDD|185600 PTZ00410, PTZ00410, NAD-dependent SIR2; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 192
cd01410206 SIRT7 SIRT7: Eukaryotic and prokaryotic group (cla 100.0
cd01409260 SIRT4 SIRT4: Eukaryotic and prokaryotic group (cla 100.0
COG0846250 SIR2 NAD-dependent protein deacetylases, SIR2 fami 100.0
PTZ00409271 Sir2 (Silent Information Regulator) protein; Provi 100.0
cd01408235 SIRT1 SIRT1: Eukaryotic group (class1) which inclu 100.0
PRK14138244 NAD-dependent deacetylase; Provisional 100.0
PTZ00410 349 NAD-dependent SIR2; Provisional 100.0
cd01413222 SIR2_Af2 SIR2_Af2: Archaeal and prokaryotic group 100.0
PRK05333285 NAD-dependent deacetylase; Provisional 100.0
PRK00481242 NAD-dependent deacetylase; Provisional 100.0
cd01411225 SIR2H SIR2H: Uncharacterized prokaryotic Sir2 homo 100.0
cd01407218 SIR2-fam SIR2 family of proteins includes silent i 100.0
PTZ00408242 NAD-dependent deacetylase; Provisional 100.0
PF02146178 SIR2: Sir2 family; InterPro: IPR003000 These seque 100.0
cd01412224 SIRT5_Af1_CobB SIRT5_Af1_CobB: Eukaryotic, archaea 100.0
KOG1905|consensus 353 100.0
cd00296222 SIR2 SIR2 superfamily of proteins includes silent 100.0
KOG2683|consensus305 100.0
KOG2684|consensus 412 100.0
KOG2682|consensus314 100.0
cd01406242 SIR2-like Sir2-like: Prokaryotic group of uncharac 99.24
PF13289143 SIR2_2: SIR2-like domain 93.42
smart0083441 CxxC_CXXC_SSSS Putative regulatory protein. CxxC_C 90.08
PF0972342 Zn-ribbon_8: Zinc ribbon domain; InterPro: IPR0134 90.01
PF00205137 TPP_enzyme_M: Thiamine pyrophosphate enzyme, centr 82.62
>cd01410 SIRT7 SIRT7: Eukaryotic and prokaryotic group (class4) which includes human sirtuin SIRT6, SIRT7, and several bacterial homologs; and are members of the SIR2 family of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation Back     alignment and domain information 
Probab=100.00  E-value=3.2e-58  Score=371.87  Aligned_cols=165  Identities=47%  Similarity=0.800  Sum_probs=149.9

Q ss_pred             CcEEEEeCCccchhCCCCCCCCCCCcccccc-cCCCCcccccccCCCCCHHHHHHHHHHHcCCccEEEeccCcchhhhcC
Q psy13183         23 KHVVLHTGAGISTSAGIPDFRGPNGVWTLEK-KGIKPKVNISFDDAVPTVTHMAILELVNQGKVHYVVSQNIDGLHLRSG  101 (192)
Q Consensus        23 ~~ivv~tGAGiS~~sGipdfr~~~g~~~~~~-~~~~p~~~~~~~~~~P~~~H~~l~~l~~~g~~~~viTqNiD~L~~~aG  101 (192)
                      |+|||+||||||++|||||||+++|+|+... +..+|.+.|.|.+++||.+|++|++|++.|++.+||||||||||+|||
T Consensus         1 k~ivvltGAGiS~~SGIP~fR~~~Glw~~~~~~~~~~~~~~~~~~~~Pn~~H~~La~l~~~g~~~~viTQNID~Lh~~AG   80 (206)
T cd01410           1 KHLVVFTGAGISTSAGIPDFRGPNGVWTLLPEDKGRRRFSWRFRRAEPTLTHMALVELERAGLLKFVISQNVDGLHLRSG   80 (206)
T ss_pred             CcEEEEeCCcccHhhCCCcccCcCCCcccCCccccChHHHhhhhcCCCCHHHHHHHHHHHCCCCceEEecCccchHhHcC
Confidence            6899999999999999999999999998644 466788889999999999999999999999999999999999999999


Q ss_pred             CCCCceEEeCccccccccCccccccccchhhhhccCCCCCCCCCCCCCCCCCCcccceEEECCCCCCHHHHHHHHHHccc
Q psy13183        102 LSRKYLAELHGNMYVDQCNKCERQFVRKSATNSVGQKNLNIPCPYRGFRPCRGTLHDTILDWEHNLPQKDINMGDYNSSI  181 (192)
Q Consensus       102 ~~~~~v~elHG~~~~~~C~~C~~~~~~~~~~~~~~~~~~~~~C~~~~~~~Cgg~lrP~Vv~fge~~p~~~~~~a~~~~~~  181 (192)
                      ++.++|+|+|||+++++|+.|++.+..+.....+......|+|+     .|||.|||+||||||++|...++++.+++++
T Consensus        81 ~~~~~vielHG~~~~~~C~~C~~~~~~~~~~~~~~~~~~~p~C~-----~Cgg~lrP~VV~FgE~lp~~~~~~a~~~~~~  155 (206)
T cd01410          81 LPREKLSELHGNMFIEVCKSCGPEYVRDDVVETRGDKETGRRCH-----ACGGILKDTIVDFGERLPPENWMGAAAAACR  155 (206)
T ss_pred             cCcccEEEecCCcCcccCCCCCCccchHHHHHHhhcCCCCCcCC-----CCcCccCCcEEECCCCCCHHHHHHHHHHHhc
Confidence            98899999999999999999999887766554443334567887     9999999999999999999999999999999


Q ss_pred             CCEEEEEecCC
Q psy13183        182 ADLSIIESKRG  192 (192)
Q Consensus       182 ~DlllviGTSg  192 (192)
                      ||++||||||+
T Consensus       156 aDlllviGTSl  166 (206)
T cd01410         156 ADLFLCLGTSL  166 (206)
T ss_pred             CCEEEEECcCc
Confidence            99999999995

Sir2 proteins have been shown to regulate gene silencing, DNA repair, metabolic enzymes, and life span.
>cd01409 SIRT4 SIRT4: Eukaryotic and prokaryotic group (class2) which includes human sirtuin SIRT4 and several bacterial homologs; and are members of the SIR2 family of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation Back     alignment and domain information
>COG0846 SIR2 NAD-dependent protein deacetylases, SIR2 family [Transcription] Back     alignment and domain information
>PTZ00409 Sir2 (Silent Information Regulator) protein; Provisional Back     alignment and domain information
>cd01408 SIRT1 SIRT1: Eukaryotic group (class1) which includes human sirtuins SIRT1-3 and yeast Hst1-4; and are members of the SIR2 family of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation Back     alignment and domain information
>PRK14138 NAD-dependent deacetylase; Provisional Back     alignment and domain information
>PTZ00410 NAD-dependent SIR2; Provisional Back     alignment and domain information
>cd01413 SIR2_Af2 SIR2_Af2: Archaeal and prokaryotic group which includes Archaeoglobus fulgidus Sir2-Af2, Sulfolobus solfataricus ssSir2, and several bacterial homologs; and are members of the SIR2 family of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation Back     alignment and domain information
>PRK05333 NAD-dependent deacetylase; Provisional Back     alignment and domain information
>PRK00481 NAD-dependent deacetylase; Provisional Back     alignment and domain information
>cd01411 SIR2H SIR2H: Uncharacterized prokaryotic Sir2 homologs from several gram positive bacterial species and Fusobacteria; and are members of the SIR2 family of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation Back     alignment and domain information
>cd01407 SIR2-fam SIR2 family of proteins includes silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation, where the acetyl group from the lysine epsilon-amino group is transferred to the ADP-ribose moiety of NAD+, producing nicotinamide and the novel metabolite O-acetyl-ADP-ribose Back     alignment and domain information
>PTZ00408 NAD-dependent deacetylase; Provisional Back     alignment and domain information
>PF02146 SIR2: Sir2 family; InterPro: IPR003000 These sequences represent the Sirtuin (Sir2-related) family of NAD+-dependent deacetylases Back     alignment and domain information
>cd01412 SIRT5_Af1_CobB SIRT5_Af1_CobB: Eukaryotic, archaeal and prokaryotic group (class3) which includes human sirtuin SIRT5, Archaeoglobus fulgidus Sir2-Af1, and E Back     alignment and domain information
>KOG1905|consensus Back     alignment and domain information
>cd00296 SIR2 SIR2 superfamily of proteins includes silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation, where the acetyl group from the lysine epsilon-amino group is transferred to the ADP-ribose moiety of NAD+, producing nicotinamide and the novel metabolite O-acetyl-ADP-ribose Back     alignment and domain information
>KOG2683|consensus Back     alignment and domain information
>KOG2684|consensus Back     alignment and domain information
>KOG2682|consensus Back     alignment and domain information
>cd01406 SIR2-like Sir2-like: Prokaryotic group of uncharacterized Sir2-like proteins which lack certain key catalytic residues and conserved zinc binding cysteines; and are members of the SIR2 superfamily of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation Back     alignment and domain information
>PF13289 SIR2_2: SIR2-like domain Back     alignment and domain information
>smart00834 CxxC_CXXC_SSSS Putative regulatory protein Back     alignment and domain information
>PF09723 Zn-ribbon_8: Zinc ribbon domain; InterPro: IPR013429 This entry represents a region of about 41 amino acids found in a number of small proteins in a wide range of bacteria Back     alignment and domain information
>PF00205 TPP_enzyme_M: Thiamine pyrophosphate enzyme, central domain; InterPro: IPR012000 A number of enzymes require thiamine pyrophosphate (TPP) (vitamin B1) as a cofactor Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query192
3pki_A 355 Human Sirt6 Crystal Structure In Complex With Adp R 9e-55
3k35_A 318 Crystal Structure Of Human Sirt6 Length = 318 9e-55
1yc5_A246 Sir2-P53 Peptide-Nicotinamide Length = 246 2e-18
2h4h_A246 Sir2 H116y Mutant-P53 Peptide-Nad Length = 246 8e-18
2h59_A246 Sir2 H116a-Deacetylated P53 Peptide-3'-O-Acetyl Adp 2e-17
1ma3_A253 Structure Of A Sir2 Enzyme Bound To An Acetylated P 4e-15
1m2n_A249 Sir2 Homologues (D102gF159AR170A) MUTANT-2'-O-Acety 4e-12
4hd8_A284 Crystal Structure Of Human Sirt3 In Complex With Fl 2e-11
3glr_A285 Crystal Structure Of Human Sirt3 With Acetyl-Lysine 2e-11
4fvt_A274 Human Sirt3 Bound To Ac-Acs Peptide And Carba-Nad L 2e-11
2b4y_A271 Crystal Structure Of Human Sirtuin Homolog 5 Length 2e-11
1m2g_A249 Sir2 Homologue-Adp Ribose Complex Length = 249 3e-11
1m2k_A249 Sir2 Homologue F159a Mutant-Adp Ribose Complex Leng 3e-11
1ici_A256 Crystal Structure Of A Sir2 Homolog-Nad Complex Len 3e-11
3rig_A273 Sirt5 Is An Nad-Dependent Protein Lysine Demalonyla 3e-11
2nyr_A271 Crystal Structure Of Human Sirtuin Homolog 5 In Com 3e-11
4g1c_A267 Human Sirt5 Bound To Succ-Idh2 And Carba-Nad Length 3e-11
4hda_A275 Crystal Structure Of Human Sirt5 In Complex With Fl 3e-11
1m2h_A249 Sir2 Homologue S24a Mutant-adp Ribose Complex Lengt 6e-11
1m2j_A249 Sir2 Homologue H80n Mutant-Adp Ribose Complex Lengt 2e-10
3u31_A290 Plasmodium Falciparum Sir2a Preferentially Hydrolyz 4e-10
3jwp_A265 Crystal Structure Of Plasmodium Falciparum Sir2a (P 6e-10
1j8f_A323 Human Sirt2 Histone Deacetylase Length = 323 9e-10
1j8f_C323 Human Sirt2 Histone Deacetylase Length = 323 1e-09
2hjh_A 354 Crystal Structure Of The Sir2 Deacetylase Length = 1e-08
4iao_A 492 Crystal Structure Of Sir2 C543s Mutant In Complex W 2e-08
4i5i_A287 Crystal Structure Of The Sirt1 Catalytic Domain Bou 2e-07
1q17_A300 Structure Of The Yeast Hst2 Protein Deacetylase In 6e-06
1q1a_A289 Structure Of The Yeast Hst2 Protein Deacetylase In 6e-06
1szc_A297 Structural Basis For Nicotinamide Cleavage And Adp- 6e-06
2od7_A308 Crystal Structure Of Yhst2 Bound To The Intermediat 6e-06
1q14_A 361 Structure And Autoregulation Of The Yeast Hst2 Homo 6e-06
1s5p_A235 Structure And Substrate Binding Properties Of Cobb, 1e-05
2od2_A308 Crystal Structure Of Yhst2 I117f Mutant Bound To Ca 2e-05
>pdb|3PKI|A Chain A, Human Sirt6 Crystal Structure In Complex With Adp Ribose Length = 355 Back     alignment and structure 
Iteration: 1

 Score =  209 bits (531), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 95/188 (50%), Positives = 133/188 (70%), Gaps = 3/188 (1%)
Query: 2   FDSKEDFDKKIKVLSEWIDKAKHVVLHTGAGISTSAGIPDFRGPNGVWTLEKKGIKPKVN 61
           FD  E+ ++K+  L+  + ++  VV HTGAGIST++GIPDFRGP+GVWT+E++G+ PK +
Sbjct: 24  FDPPEELERKVWELARLVWQSSSVVFHTGAGISTASGIPDFRGPHGVWTMEERGLAPKFD 83
Query: 62  ISFDDAVPTVTHMAILELVNQGKVHYVVSQNIDGLHLRSGLSRKYLAELHGNMYVDQCNK 121
            +F+ A PT THMA+++L   G + ++VSQN+DGLH+RSG  R  LAELHGNM+V++C K
Sbjct: 84  TTFESARPTQTHMALVQLERVGLLRFLVSQNVDGLHVRSGFPRDKLAELHGNMFVEECAK 143
Query: 122 CERQFVRKSATNSVGQKNLNIPCPY---RGFRPCRGTLHDTILDWEHNLPQKDINMGDYN 178
           C+ Q+VR +   ++G K     C     RG R CRG L DTILDWE +LP +D+ + D  
Sbjct: 144 CKTQYVRDTVVGTMGLKATGRLCTVAKARGLRACRGELRDTILDWEDSLPDRDLALADEA 203
Query: 179 SSIADLSI 186
           S  ADLSI
Sbjct: 204 SRNADLSI 211
>pdb|3K35|A Chain A, Crystal Structure Of Human Sirt6 Length = 318 Back     alignment and structure
>pdb|1YC5|A Chain A, Sir2-P53 Peptide-Nicotinamide Length = 246 Back     alignment and structure
>pdb|2H4H|A Chain A, Sir2 H116y Mutant-P53 Peptide-Nad Length = 246 Back     alignment and structure
>pdb|2H59|A Chain A, Sir2 H116a-Deacetylated P53 Peptide-3'-O-Acetyl Adp Ribose Length = 246 Back     alignment and structure
>pdb|1MA3|A Chain A, Structure Of A Sir2 Enzyme Bound To An Acetylated P53 Peptide Length = 253 Back     alignment and structure
>pdb|1M2N|A Chain A, Sir2 Homologues (D102gF159AR170A) MUTANT-2'-O-Acetyl Adp Ribose Complex Length = 249 Back     alignment and structure
>pdb|4HD8|A Chain A, Crystal Structure Of Human Sirt3 In Complex With Fluor-de-lys Peptide And Piceatannol Length = 284 Back     alignment and structure
>pdb|3GLR|A Chain A, Crystal Structure Of Human Sirt3 With Acetyl-Lysine Acecs2 Peptide Length = 285 Back     alignment and structure
>pdb|4FVT|A Chain A, Human Sirt3 Bound To Ac-Acs Peptide And Carba-Nad Length = 274 Back     alignment and structure
>pdb|2B4Y|A Chain A, Crystal Structure Of Human Sirtuin Homolog 5 Length = 271 Back     alignment and structure
>pdb|1M2G|A Chain A, Sir2 Homologue-Adp Ribose Complex Length = 249 Back     alignment and structure
>pdb|1M2K|A Chain A, Sir2 Homologue F159a Mutant-Adp Ribose Complex Length = 249 Back     alignment and structure
>pdb|1ICI|A Chain A, Crystal Structure Of A Sir2 Homolog-Nad Complex Length = 256 Back     alignment and structure
>pdb|3RIG|A Chain A, Sirt5 Is An Nad-Dependent Protein Lysine Demalonylase And Desuccinylase Length = 273 Back     alignment and structure
>pdb|2NYR|A Chain A, Crystal Structure Of Human Sirtuin Homolog 5 In Complex With Suramin Length = 271 Back     alignment and structure
>pdb|4G1C|A Chain A, Human Sirt5 Bound To Succ-Idh2 And Carba-Nad Length = 267 Back     alignment and structure
>pdb|4HDA|A Chain A, Crystal Structure Of Human Sirt5 In Complex With Fluor-de-lys Peptide And Resveratrol Length = 275 Back     alignment and structure
>pdb|1M2H|A Chain A, Sir2 Homologue S24a Mutant-adp Ribose Complex Length = 249 Back     alignment and structure
>pdb|1M2J|A Chain A, Sir2 Homologue H80n Mutant-Adp Ribose Complex Length = 249 Back     alignment and structure
>pdb|3U31|A Chain A, Plasmodium Falciparum Sir2a Preferentially Hydrolyzes Medium And Long Chain Fatty Acyl Lysine Length = 290 Back     alignment and structure
>pdb|3JWP|A Chain A, Crystal Structure Of Plasmodium Falciparum Sir2a (Pf13_0152) In Complex With Amp Length = 265 Back     alignment and structure
>pdb|1J8F|A Chain A, Human Sirt2 Histone Deacetylase Length = 323 Back     alignment and structure
>pdb|1J8F|C Chain C, Human Sirt2 Histone Deacetylase Length = 323 Back     alignment and structure
>pdb|2HJH|A Chain A, Crystal Structure Of The Sir2 Deacetylase Length = 354 Back     alignment and structure
>pdb|4IAO|A Chain A, Crystal Structure Of Sir2 C543s Mutant In Complex With Sid Domain Of Sir4 Length = 492 Back     alignment and structure
>pdb|4I5I|A Chain A, Crystal Structure Of The Sirt1 Catalytic Domain Bound To Nad And An Ex527 Analog Length = 287 Back     alignment and structure
>pdb|1Q17|A Chain A, Structure Of The Yeast Hst2 Protein Deacetylase In Ternary Complex With 2'-O-Acetyl Adp Ribose And Histone Peptide Length = 300 Back     alignment and structure
>pdb|1Q1A|A Chain A, Structure Of The Yeast Hst2 Protein Deacetylase In Ternary Complex With 2'-O-Acetyl Adp Ribose And Histone Peptide Length = 289 Back     alignment and structure
>pdb|1SZC|A Chain A, Structural Basis For Nicotinamide Cleavage And Adp-Ribose Transfer By Nad+-Dependent Sir2 HistonePROTEIN DEACETYLASES Length = 297 Back     alignment and structure
>pdb|2OD7|A Chain A, Crystal Structure Of Yhst2 Bound To The Intermediate Analogue Adp-Hpd, And And Aceylated H4 Peptide Length = 308 Back     alignment and structure
>pdb|1Q14|A Chain A, Structure And Autoregulation Of The Yeast Hst2 Homolog Of Sir2 Length = 361 Back     alignment and structure
>pdb|1S5P|A Chain A, Structure And Substrate Binding Properties Of Cobb, A Sir2 Homolog Protein Deacetylase From Eschericia Coli Length = 235 Back     alignment and structure
>pdb|2OD2|A Chain A, Crystal Structure Of Yhst2 I117f Mutant Bound To Carba-Nad+ And An Acetylated H4 Peptide Length = 308 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query192
3k35_A 318 NAD-dependent deacetylase sirtuin-6; rossmann fold 3e-76
3pki_A 355 NAD-dependent deacetylase sirtuin-6; ADP ribose, s 3e-76
1yc5_A246 NAD-dependent deacetylase; SIR2, sirtuin, SIR2TM, 4e-49
1q1a_A289 HST2 protein; ternary complex, histone deacetylase 1e-37
2hjh_A354 NAD-dependent histone deacetylase SIR2; protein, s 1e-37
3glr_A285 NAD-dependent deacetylase sirtuin-3, mitochondria; 9e-35
3u31_A290 SIR2A, transcriptional regulatory protein SIR2 hom 1e-33
1ma3_A253 SIR2-AF2, transcriptional regulatory protein, SIR2 4e-33
1q14_A 361 HST2 protein; histone deacetylase, hydrolase; 2.50 5e-32
1m2k_A249 Silent information regulator 2; protein-ligand com 2e-31
3riy_A273 NAD-dependent deacetylase sirtuin-5; desuccinylase 3e-29
1j8f_A323 SIRT2, sirtuin 2, isoform 1, silencing INFO; gene 4e-27
1s5p_A235 NAD-dependent deacetylase; protein deacetylase, SI 8e-26
>3k35_A NAD-dependent deacetylase sirtuin-6; rossmann fold, Zn-binding domain, structural genomics, struc genomics consortium, SGC, ADP-ribosylation; HET: APR; 2.00A {Homo sapiens} Length = 318 Back     alignment and structure
 Score =  230 bits (589), Expect = 3e-76
 Identities = 95/189 (50%), Positives = 133/189 (70%), Gaps = 3/189 (1%)

Query: 2   FDSKEDFDKKIKVLSEWIDKAKHVVLHTGAGISTSAGIPDFRGPNGVWTLEKKGIKPKVN 61
           FD  E+ ++K+  L+  + ++  VV HTGAGIST++GIPDFRGP+GVWT+E++G+ PK +
Sbjct: 24  FDPPEELERKVWELARLVWQSSSVVFHTGAGISTASGIPDFRGPHGVWTMEERGLAPKFD 83

Query: 62  ISFDDAVPTVTHMAILELVNQGKVHYVVSQNIDGLHLRSGLSRKYLAELHGNMYVDQCNK 121
            +F+ A PT THMA+++L   G + ++VSQN+DGLH+RSG  R  LAELHGNM+V++C K
Sbjct: 84  TTFESARPTQTHMALVQLERVGLLRFLVSQNVDGLHVRSGFPRDKLAELHGNMFVEECAK 143

Query: 122 CERQFVRKSATNSVGQKNLNIPCPY---RGFRPCRGTLHDTILDWEHNLPQKDINMGDYN 178
           C+ Q+VR +   ++G K     C     RG R CRG L DTILDWE +LP +D+ + D  
Sbjct: 144 CKTQYVRDTVVGTMGLKATGRLCTVAKARGLRACRGELRDTILDWEDSLPDRDLALADEA 203

Query: 179 SSIADLSII 187
           S  ADLSI 
Sbjct: 204 SRNADLSIT 212
>3pki_A NAD-dependent deacetylase sirtuin-6; ADP ribose, structural genomics, structural genomics consortium, SGC, hydrolase; HET: AR6; 2.04A {Homo sapiens} PDB: 3pkj_A* Length = 355 Back     alignment and structure
>1yc5_A NAD-dependent deacetylase; SIR2, sirtuin, SIR2TM, SIRT1, nicotinamide, hydrolase; HET: ALY; 1.40A {Thermotoga maritima} SCOP: c.31.1.5 PDB: 2h2d_A* 2h2f_A 2h2g_A* 2h2h_A* 2h2i_A* 2h4f_A* 2h4j_A* 3d4b_A* 3d81_A* 3pdh_A* 2h4h_A* 3jr3_A* 2h59_A* Length = 246 Back     alignment and structure
>1q1a_A HST2 protein; ternary complex, histone deacetylase, 2'-O-ADP ribose,, gene regulation; HET: ALY OAD; 1.50A {Saccharomyces cerevisiae} SCOP: c.31.1.5 PDB: 1szd_A* 1szc_A* 2od7_A* 2od9_A* 2qqf_A* 2qqg_A* 1q17_A* 2od2_A* Length = 289 Back     alignment and structure
>2hjh_A NAD-dependent histone deacetylase SIR2; protein, sirtuin, acetyl-ADP-ribose, nicotinamide, hydrolase; HET: XYQ; 1.85A {Saccharomyces cerevisiae} Length = 354 Back     alignment and structure
>3glr_A NAD-dependent deacetylase sirtuin-3, mitochondria; NAD dependent deacetylase, sirtuin, substrate peptide comple hydrolase, metal-binding; HET: ALY; 1.80A {Homo sapiens} PDB: 3gls_A 3glt_A* 3glu_A Length = 285 Back     alignment and structure
>3u31_A SIR2A, transcriptional regulatory protein SIR2 homologue; Zn-binding domain, rossmann fold domain; HET: MYK NAD; 2.20A {Plasmodium falciparum} PDB: 3u3d_A* 3jwp_A* Length = 290 Back     alignment and structure
>1ma3_A SIR2-AF2, transcriptional regulatory protein, SIR2 family; enzyme-substrate complex, protein binding, transcription; HET: ALY MES; 2.00A {Archaeoglobus fulgidus} SCOP: c.31.1.5 PDB: 1s7g_A* 1yc2_A* Length = 253 Back     alignment and structure
>1q14_A HST2 protein; histone deacetylase, hydrolase; 2.50A {Saccharomyces cerevisiae} SCOP: c.31.1.5 Length = 361 Back     alignment and structure
>1m2k_A Silent information regulator 2; protein-ligand complex, gene regulation; HET: APR; 1.47A {Archaeoglobus fulgidus} SCOP: c.31.1.5 PDB: 1m2g_A* 1m2h_A* 1m2j_A* 1m2n_A* 1ici_A* Length = 249 Back     alignment and structure
>3riy_A NAD-dependent deacetylase sirtuin-5; desuccinylase, demalonylase, posttranslational modification, binding domain, rossmann fold domain; HET: SLL NAD; 1.55A {Homo sapiens} PDB: 3rig_A* 2b4y_A* 2nyr_A* Length = 273 Back     alignment and structure
>1j8f_A SIRT2, sirtuin 2, isoform 1, silencing INFO; gene regulation, transferase; 1.70A {Homo sapiens} SCOP: c.31.1.5 Length = 323 Back     alignment and structure
>1s5p_A NAD-dependent deacetylase; protein deacetylase, SIR2 homologue, hydrolase; HET: ALY; 1.96A {Escherichia coli} SCOP: c.31.1.5 Length = 235 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query192
3k35_A 318 NAD-dependent deacetylase sirtuin-6; rossmann fold 100.0
3pki_A 355 NAD-dependent deacetylase sirtuin-6; ADP ribose, s 100.0
3glr_A285 NAD-dependent deacetylase sirtuin-3, mitochondria; 100.0
1yc5_A246 NAD-dependent deacetylase; SIR2, sirtuin, SIR2TM, 100.0
1ma3_A253 SIR2-AF2, transcriptional regulatory protein, SIR2 100.0
1q1a_A289 HST2 protein; ternary complex, histone deacetylase 100.0
3u31_A290 SIR2A, transcriptional regulatory protein SIR2 hom 100.0
3riy_A273 NAD-dependent deacetylase sirtuin-5; desuccinylase 100.0
1m2k_A249 Silent information regulator 2; protein-ligand com 100.0
1q14_A 361 HST2 protein; histone deacetylase, hydrolase; 2.50 100.0
4iao_A492 NAD-dependent histone deacetylase SIR2; protein co 100.0
2hjh_A354 NAD-dependent histone deacetylase SIR2; protein, s 100.0
1j8f_A323 SIRT2, sirtuin 2, isoform 1, silencing INFO; gene 100.0
1s5p_A235 NAD-dependent deacetylase; protein deacetylase, SI 100.0
>3k35_A NAD-dependent deacetylase sirtuin-6; rossmann fold, Zn-binding domain, structural genomics, struc genomics consortium, SGC, ADP-ribosylation; HET: APR; 2.00A {Homo sapiens} Back     alignment and structure
Probab=100.00  E-value=3.1e-63  Score=420.77  Aligned_cols=192  Identities=49%  Similarity=0.914  Sum_probs=170.9

Q ss_pred             CCCCHHHHHHHHHHHHHHHHhCCcEEEEeCCccchhCCCCCCCCCCCcccccccCCCCcccccccCCCCCHHHHHHHHHH
Q psy13183          1 TFDSKEDFDKKIKVLSEWIDKAKHVVLHTGAGISTSAGIPDFRGPNGVWTLEKKGIKPKVNISFDDAVPTVTHMAILELV   80 (192)
Q Consensus         1 ~~d~~~~~~~~l~~l~~~i~~a~~ivv~tGAGiS~~sGipdfr~~~g~~~~~~~~~~p~~~~~~~~~~P~~~H~~l~~l~   80 (192)
                      +||+++++++++++|+++|++|++|||+||||||++|||||||+++|+|+..++..+|++.|.|.+++||.+|++|++|+
T Consensus        23 ~~d~p~~l~~~i~~l~~~i~~a~~ivvlTGAGISteSGIPdFR~~~Glw~~~~~~~~p~~~~~f~~a~Pn~~H~aLa~Le  102 (318)
T 3k35_A           23 IFDPPEELERKVWELARLVWQSSSVVFHTGAGISTASGIPDFRGPHGVWTMEERGLAPKFDTTFESARPTQTHMALVQLE  102 (318)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHCSCEEEEECGGGSGGGTCCCSSSTTCHHHHHTTTCCCCCSSCTTTCCCCHHHHHHHHHH
T ss_pred             ccCCHHHHHHHHHHHHHHHHhCCCEEEEeccccChhhCCCccccCCCcchhhhccCCHHHHHHhhhCCCCHHHHHHHHHH
Confidence            58999999999999999999999999999999999999999999999999877788899999999999999999999999


Q ss_pred             HcCCccEEEeccCcchhhhcCCCCCceEEeCccccccccCccccccccchhhhhccCCCCCCCCCC---CCCCCCCCccc
Q psy13183         81 NQGKVHYVVSQNIDGLHLRSGLSRKYLAELHGNMYVDQCNKCERQFVRKSATNSVGQKNLNIPCPY---RGFRPCRGTLH  157 (192)
Q Consensus        81 ~~g~~~~viTqNiD~L~~~aG~~~~~v~elHG~~~~~~C~~C~~~~~~~~~~~~~~~~~~~~~C~~---~~~~~Cgg~lr  157 (192)
                      +.|++.+||||||||||+|||++.++|+|+|||+++.+|+.|++.|.++.........+.++.|+.   ..|+.|||.||
T Consensus       103 ~~g~~~~viTQNIDgLh~rAG~~~~~VielHGsl~~~~C~~C~~~~~~~~~~~~~~~~p~~~~C~~~~~~~c~~CgG~LR  182 (318)
T 3k35_A          103 RVGLLRFLVSQNVDGLHVRSGFPRDKLAELHGNMFVEECAKCKTQYVRDTVVGTMGLKATGRLCTVAKARGLRACRGELR  182 (318)
T ss_dssp             HTTCCCEEEECCCSCHHHHBTCCGGGEEETTCCTTEEEETTTCCEEECSSCCSCCSSCEEEEECCC--------CCCEEE
T ss_pred             HcCCceEEEEecccchHhhcCCCccCEEEeCCCCCeeEeCCCCCccchHHhhhhcccCCCCCcCcccccccccCcCCeeC
Confidence            999999999999999999999988899999999999999999999887654432222223345642   45678999999


Q ss_pred             ceEEECCCCCCHHHHHHHHHHcccCCEEEEEecCC
Q psy13183        158 DTILDWEHNLPQKDINMGDYNSSIADLSIIESKRG  192 (192)
Q Consensus       158 P~Vv~fge~~p~~~~~~a~~~~~~~DlllviGTSg  192 (192)
                      |+||||||++|.+.+++|.+++++||++||||||+
T Consensus       183 PdVV~FGE~lP~~~~~~a~~~~~~aDllLViGTSL  217 (318)
T 3k35_A          183 DTILDWEDSLPDRDLALADEASRNADLSITLGTSL  217 (318)
T ss_dssp             ECCCCTTCCCCHHHHHHHHHHHHTCSEEEEESCCC
T ss_pred             CCEEEccCcCCHHHHHHHHHHHhcCCEEEEEccCC
Confidence            99999999999999999999999999999999996
>3pki_A NAD-dependent deacetylase sirtuin-6; ADP ribose, structural genomics, structural genomics consortium, SGC, hydrolase; HET: AR6; 2.04A {Homo sapiens} PDB: 3pkj_A* Back     alignment and structure
>3glr_A NAD-dependent deacetylase sirtuin-3, mitochondria; NAD dependent deacetylase, sirtuin, substrate peptide comple hydrolase, metal-binding; HET: ALY; 1.80A {Homo sapiens} PDB: 3gls_A 3glt_A* 3glu_A 4hd8_A* 4fvt_A* Back     alignment and structure
>1yc5_A NAD-dependent deacetylase; SIR2, sirtuin, SIR2TM, SIRT1, nicotinamide, hydrolase; HET: ALY; 1.40A {Thermotoga maritima} SCOP: c.31.1.5 PDB: 2h2d_A* 2h2f_A 2h2g_A* 2h2h_A* 2h2i_A* 2h4f_A* 2h4j_A* 3d4b_A* 3d81_A* 3pdh_A* 2h4h_A* 3jr3_A* 2h59_A* Back     alignment and structure
>1ma3_A SIR2-AF2, transcriptional regulatory protein, SIR2 family; enzyme-substrate complex, protein binding, transcription; HET: ALY MES; 2.00A {Archaeoglobus fulgidus} SCOP: c.31.1.5 PDB: 1s7g_A* 1yc2_A* Back     alignment and structure
>1q1a_A HST2 protein; ternary complex, histone deacetylase, 2'-O-ADP ribose,, gene regulation; HET: ALY OAD; 1.50A {Saccharomyces cerevisiae} SCOP: c.31.1.5 PDB: 1szd_A* 1szc_A* 2od7_A* 2od9_A* 2qqf_A* 2qqg_A* 1q17_A* 2od2_A* Back     alignment and structure
>3u31_A SIR2A, transcriptional regulatory protein SIR2 homologue; Zn-binding domain, rossmann fold domain; HET: MYK NAD; 2.20A {Plasmodium falciparum} PDB: 3u3d_A* 3jwp_A* Back     alignment and structure
>3riy_A NAD-dependent deacetylase sirtuin-5; desuccinylase, demalonylase, posttranslational modification, binding domain, rossmann fold domain; HET: SLL NAD; 1.55A {Homo sapiens} SCOP: c.31.1.5 PDB: 3rig_A* 4f4u_A* 4f56_A* 4hda_A* 2b4y_A* 2nyr_A* 4g1c_A* Back     alignment and structure
>1m2k_A Silent information regulator 2; protein-ligand complex, gene regulation; HET: APR; 1.47A {Archaeoglobus fulgidus} SCOP: c.31.1.5 PDB: 1m2g_A* 1m2h_A* 1m2j_A* 1m2n_A* 1ici_A* Back     alignment and structure
>1q14_A HST2 protein; histone deacetylase, hydrolase; 2.50A {Saccharomyces cerevisiae} SCOP: c.31.1.5 Back     alignment and structure
>4iao_A NAD-dependent histone deacetylase SIR2; protein complex, deacetylase, nucleus, hydrolase-trans complex; HET: APR; 2.90A {Saccharomyces cerevisiae} Back     alignment and structure
>2hjh_A NAD-dependent histone deacetylase SIR2; protein, sirtuin, acetyl-ADP-ribose, nicotinamide, hydrolase; HET: XYQ; 1.85A {Saccharomyces cerevisiae} Back     alignment and structure
>1j8f_A SIRT2, sirtuin 2, isoform 1, silencing INFO; gene regulation, transferase; 1.70A {Homo sapiens} SCOP: c.31.1.5 Back     alignment and structure
>1s5p_A NAD-dependent deacetylase; protein deacetylase, SIR2 homologue, hydrolase; HET: ALY; 1.96A {Escherichia coli} SCOP: c.31.1.5 Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 192
d1ma3a_252 c.31.1.5 (A:) AF0112, Sir2 homolog (Sir2-AF2) {Arc 2e-31
d2b4ya1267 c.31.1.5 (A:36-302) NAD-dependent deacetylase sirt 7e-29
d1yc5a1245 c.31.1.5 (A:1-245) NAD-dependent deacetylase NpdA 4e-28
d1m2ka_249 c.31.1.5 (A:) AF1676, Sir2 homolog (Sir2-AF1?) {Ar 2e-26
d1q1aa_289 c.31.1.5 (A:) Hst2 {Baker's yeast (Saccharomyces c 4e-23
d1j8fa_323 c.31.1.5 (A:) Sirt2 histone deacetylase {Human (Ho 1e-21
d1s5pa_235 c.31.1.5 (A:) NAD-dependent deacetylase CobB {Esch 1e-19
>d1ma3a_ c.31.1.5 (A:) AF0112, Sir2 homolog (Sir2-AF2) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 252 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: DHS-like NAD/FAD-binding domain
superfamily: DHS-like NAD/FAD-binding domain
family: Sir2 family of transcriptional regulators
domain: AF0112, Sir2 homolog (Sir2-AF2)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

 Score =  112 bits (281), Expect = 2e-31
 Identities = 50/195 (25%), Positives = 77/195 (39%), Gaps = 23/195 (11%)

Query: 9   DKKIKVLSEWIDKAKHVVLHTGAGISTSAGIPDFRGPNGVWTLEKKG------------- 55
           + +I+  +E + K+KH V+ TGAGIS  +GIP FRG +G+W                   
Sbjct: 2   EDEIRKAAEILAKSKHAVVFTGAGISAESGIPTFRGEDGLWRKYDPEEVASISGFKRNPR 61

Query: 56  ---IKPKVNISFDDAVPTVTHMAILELVNQGKVHYVVSQNIDGLHLRSGLSRKYLAELHG 112
                         A P   H AI EL   G V  V++QNID LH R+G  R  + ELHG
Sbjct: 62  AFWEFSMEMKDKLFAEPNPAHYAIAELERMGIVKAVITQNIDMLHQRAGSRR--VLELHG 119

Query: 113 NMYVDQCNKCERQFVRKSATNSVGQKNLNIPCPYRGFRPCRGTLHDTILDWEHNLPQKDI 172
           +M    C  C   +          +  +               +   ++ +   LPQ+ +
Sbjct: 120 SMDKLDCLDCHETYDWSEFVEDFNKGEIPRCRKC-----GSYYVKPRVVLFGEPLPQRTL 174

Query: 173 NMGDYNSSIADLSII 187
                 +   D  ++
Sbjct: 175 FEAIEEAKHCDAFMV 189
>d2b4ya1 c.31.1.5 (A:36-302) NAD-dependent deacetylase sirtuin-5 {Human (Homo sapiens) [TaxId: 9606]} Length = 267 Back     information, alignment and structure
>d1yc5a1 c.31.1.5 (A:1-245) NAD-dependent deacetylase NpdA {Thermotoga maritima [TaxId: 2336]} Length = 245 Back     information, alignment and structure
>d1m2ka_ c.31.1.5 (A:) AF1676, Sir2 homolog (Sir2-AF1?) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 249 Back     information, alignment and structure
>d1q1aa_ c.31.1.5 (A:) Hst2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 289 Back     information, alignment and structure
>d1j8fa_ c.31.1.5 (A:) Sirt2 histone deacetylase {Human (Homo sapiens) [TaxId: 9606]} Length = 323 Back     information, alignment and structure
>d1s5pa_ c.31.1.5 (A:) NAD-dependent deacetylase CobB {Escherichia coli [TaxId: 562]} Length = 235 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query192
d1yc5a1245 NAD-dependent deacetylase NpdA {Thermotoga maritim 100.0
d1m2ka_249 AF1676, Sir2 homolog (Sir2-AF1?) {Archaeon Archaeo 100.0
d1q1aa_289 Hst2 {Baker's yeast (Saccharomyces cerevisiae) [Ta 100.0
d1j8fa_323 Sirt2 histone deacetylase {Human (Homo sapiens) [T 100.0
d2b4ya1267 NAD-dependent deacetylase sirtuin-5 {Human (Homo s 100.0
d1ma3a_252 AF0112, Sir2 homolog (Sir2-AF2) {Archaeon Archaeog 100.0
d1s5pa_235 NAD-dependent deacetylase CobB {Escherichia coli [ 100.0
d1zpda1175 Pyruvate decarboxylase {Zymomonas mobilis [TaxId: 91.04
d1pvda1179 Pyruvate decarboxylase {Baker's yeast (Saccharomyc 89.48
d1ybha1179 Acetohydroxyacid synthase catalytic subunit {Thale 89.46
d2djia1177 Pyruvate oxidase {Aerococcus viridans [TaxId: 1377 89.26
d1ovma1161 Indole-3-pyruvate decarboxylase {Enterobacter cloa 89.0
d1ytla1158 Acetyl-CoA decarbonylase/synthase complex epsilon 88.51
d2ez9a1183 Pyruvate oxidase {Lactobacillus plantarum [TaxId: 87.64
d1q6za1160 Benzoylformate decarboxylase {Pseudomonas putida [ 87.54
d1ozha1179 Catabolic acetolactate synthase {Klebsiella pneumo 87.33
d2ihta1177 Carboxyethylarginine synthase {Streptomyces clavul 85.8
d2ji7a1175 Oxalyl-CoA decarboxylase {Oxalobacter formigenes [ 83.59
d2ak3a237 Microbial and mitochondrial ADK, insert "zinc fing 83.0
d1jeoa_177 Probable 3-hexulose-6-phosphate isomerase MJ1247 { 81.11
>d1yc5a1 c.31.1.5 (A:1-245) NAD-dependent deacetylase NpdA {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: DHS-like NAD/FAD-binding domain
superfamily: DHS-like NAD/FAD-binding domain
family: Sir2 family of transcriptional regulators
domain: NAD-dependent deacetylase NpdA
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=1e-57  Score=374.67  Aligned_cols=174  Identities=33%  Similarity=0.509  Sum_probs=145.5

Q ss_pred             HHHHHHHHHHhCCcEEEEeCCccchhCCCCCCCCCCCccccc--------ccCCCCcccccc--------cCCCCCHHHH
Q psy13183         11 KIKVLSEWIDKAKHVVLHTGAGISTSAGIPDFRGPNGVWTLE--------KKGIKPKVNISF--------DDAVPTVTHM   74 (192)
Q Consensus        11 ~l~~l~~~i~~a~~ivv~tGAGiS~~sGipdfr~~~g~~~~~--------~~~~~p~~~~~~--------~~~~P~~~H~   74 (192)
                      +|++|+++|++|++|||+|||||||+||||||||++|+|+..        .|..+|+.+|.|        .+++||.+|+
T Consensus         2 k~~~l~~~l~~~~~ivvltGAGiS~~SGIPdfR~~~G~w~~~~~~~~~~~~f~~~p~~~~~~~~~~~~~~~~~~P~~~H~   81 (245)
T d1yc5a1           2 KMKEFLDLLNESRLTVTLTGAGISTPSGIPDFRGPNGIYKKYSQNVFDIDFFYSHPEEFYRFAKEGIFPMLQAKPNLAHV   81 (245)
T ss_dssp             CCHHHHHHHHHCSSEEEEECGGGTGGGTCCCC-----------CCTTBHHHHHHCHHHHHHHHHHHTGGGGGCCCCHHHH
T ss_pred             cHHHHHHHHHhCCCEEEEECchhccccCCCCccCcCCCccCCCcccccHHHHHhhhHHHHHHHHhhhhhhhhhhhhhhhH
Confidence            478999999999999999999999999999999999999742        233456655544        5899999999


Q ss_pred             HHHHHHHcCCccEEEeccCcchhhhcCCCCCceEEeCccccccccCccccccccchhhhhccCCCCCCCCCCCCCCCCCC
Q psy13183         75 AILELVNQGKVHYVVSQNIDGLHLRSGLSRKYLAELHGNMYVDQCNKCERQFVRKSATNSVGQKNLNIPCPYRGFRPCRG  154 (192)
Q Consensus        75 ~l~~l~~~g~~~~viTqNiD~L~~~aG~~~~~v~elHG~~~~~~C~~C~~~~~~~~~~~~~~~~~~~~~C~~~~~~~Cgg  154 (192)
                      +|++|+++|++.+||||||||||+|||+  ++|+|+||++++.+|..|++.|..+....... ....|.|+     .|||
T Consensus        82 ~L~~l~~~~~~~~viTQNiDgLh~~AG~--~~v~elHG~l~~~~C~~c~~~~~~~~~~~~~~-~~~~p~c~-----~Cgg  153 (245)
T d1yc5a1          82 LLAKLEEKGLIEAVITQNIDRLHQRAGS--KKVIELHGNVEEYYCVRCEKKYTVEDVIKKLE-SSDVPLCD-----DCNS  153 (245)
T ss_dssp             HHHHHHHTTSCSEEEECCCSCHHHHTTC--SCEEETTEEEEEEEETTTCCEEEHHHHHHHTT-TCSSCBCT-----TTCC
T ss_pred             HHHHHHhcCCCceEeecccchHHHHcCC--ccccccccccceeeecccCCCccHHHHhhhhh-cccCCCcc-----ccCC
Confidence            9999999999999999999999999997  48999999999999999999998877655443 23456666     9999


Q ss_pred             cccceEEECCCCCCHHHHHHHHHHcccCCEEEEEecCC
Q psy13183        155 TLHDTILDWEHNLPQKDINMGDYNSSIADLSIIESKRG  192 (192)
Q Consensus       155 ~lrP~Vv~fge~~p~~~~~~a~~~~~~~DlllviGTSg  192 (192)
                      .|||+||||||++|++.++++.+++++||++||||||+
T Consensus       154 ~lrP~Vv~FgE~lp~~~~~~a~~~~~~~DlllviGTSl  191 (245)
T d1yc5a1         154 LIRPNIVFFGENLPQDALREAIGLSSRASLMIVLGSSL  191 (245)
T ss_dssp             BEEEEECCBTSBCCHHHHHHHHHHHHHCSEEEEESCCS
T ss_pred             cccCcEEEccccCCHHHHHHHHHHhhcCCEEEEECCCe
Confidence            99999999999999999999999999999999999995
>d1m2ka_ c.31.1.5 (A:) AF1676, Sir2 homolog (Sir2-AF1?) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d1q1aa_ c.31.1.5 (A:) Hst2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1j8fa_ c.31.1.5 (A:) Sirt2 histone deacetylase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2b4ya1 c.31.1.5 (A:36-302) NAD-dependent deacetylase sirtuin-5 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1ma3a_ c.31.1.5 (A:) AF0112, Sir2 homolog (Sir2-AF2) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d1s5pa_ c.31.1.5 (A:) NAD-dependent deacetylase CobB {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1zpda1 c.31.1.3 (A:188-362) Pyruvate decarboxylase {Zymomonas mobilis [TaxId: 542]} Back     information, alignment and structure
>d1pvda1 c.31.1.3 (A:182-360) Pyruvate decarboxylase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1ybha1 c.31.1.3 (A:281-459) Acetohydroxyacid synthase catalytic subunit {Thale cress (Arabidopsis thaliana), chloroplast [TaxId: 3702]} Back     information, alignment and structure
>d2djia1 c.31.1.3 (A:187-363) Pyruvate oxidase {Aerococcus viridans [TaxId: 1377]} Back     information, alignment and structure
>d1ovma1 c.31.1.3 (A:181-341) Indole-3-pyruvate decarboxylase {Enterobacter cloacae [TaxId: 550]} Back     information, alignment and structure
>d1ytla1 c.31.1.6 (A:17-174) Acetyl-CoA decarbonylase/synthase complex epsilon subunit 2, ACDE2 {Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d2ez9a1 c.31.1.3 (A:183-365) Pyruvate oxidase {Lactobacillus plantarum [TaxId: 1590]} Back     information, alignment and structure
>d1q6za1 c.31.1.3 (A:182-341) Benzoylformate decarboxylase {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1ozha1 c.31.1.3 (A:188-366) Catabolic acetolactate synthase {Klebsiella pneumoniae [TaxId: 573]} Back     information, alignment and structure
>d2ihta1 c.31.1.3 (A:198-374) Carboxyethylarginine synthase {Streptomyces clavuligerus [TaxId: 1901]} Back     information, alignment and structure
>d2ji7a1 c.31.1.3 (A:195-369) Oxalyl-CoA decarboxylase {Oxalobacter formigenes [TaxId: 847]} Back     information, alignment and structure
>d2ak3a2 g.41.2.1 (A:125-161) Microbial and mitochondrial ADK, insert "zinc finger" domain {Cow (Bos taurus), mitochondrial izozyme-3 [TaxId: 9913]} Back     information, alignment and structure
>d1jeoa_ c.80.1.3 (A:) Probable 3-hexulose-6-phosphate isomerase MJ1247 {Archaeon Methanococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure