Psyllid ID: psy13429

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110------
Protein Sequence
MVPAVEPFALALKKATINDMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDANHIRRQLPKQIYKPVCWEQTLHILYERPQGNHFPRTFECGPGKSLVTILNQVNKKAGDSAAKVPC
Secondary Structure (PSIPRED)
ccccHHHHHHHHHccccccccccEEEccccccccccccHHHcccccccccHHHHHHHHHHHHHccccHHHHHHHHHHccccccccEEEEEcccHHHHHHHHHHHHHHccccccccc
Secondary Structure Prediction (SSPRO)
cccHHHHHHHHHHccccccccEEEEEEEccccccccccccccccEcccccHHHHHHHHHHHHcccccHHHHHHHHHHccccccccEEEEEccHHHHHHHHHHHHHHHHHHHccccc
Coil and Loop (DISEMBL)
MVPAVEPFALALKKatindmiipvhsnvdgkiyrgenkevSLSVSSLFrdanhirrqlpkqiykpvcwEQTLHIlyerpqgnhfprtfecgpgksLVTILNQVNkkagdsaakvpc
Flexible Loop (DISEMBL)
MVPAVEPFALALkkatindmiipvHSNVDGKIYRGENKEVSLSVSSLFRDANhirrqlpkqiykpVCWEQTLHILYERPQGNHFPRTFECGPGKSLVTILNQVnkkagdsaakvpc
Low Complexity Region (SEG)
MVPAVEPFALALKKATINDMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDANHIRRQLPKQIYKPVCWEQTLHILYERPQGNHFPRTFECGPGKSLVTILNQVNKKAGDSAAKVPC
Disordered region (IsUnstruct)
******PFALALKKATINDMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDANHIRRQLPKQIYKPVCWEQTLHILYERPQGNHFPRTFECGPGKSLVTILNQ**************
Disordered Region (DISOPRED)
*VPAVEPFALALKKATINDMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDANHIRRQLPKQIYKPVCWEQTLHILYERPQGNHFPRTFECGPGKSLVTILNQVNKKAGDSAAKVP*
Disordered Region (DISEMBL)
MVPAVEPFALALKKATINDMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDANHIRRQLPKQIYKPVCWEQTLHILYERPQGNHFPRTFECGPGKSLVTILNQVN************
Disordered Region (DISPRO)
*VP*VEPFALALKKATINDMIIPVHSNVDGKIYRG*****SLSVSSLFRDANHIRRQLPKQIYKPVCWEQTLHILYERPQGNHFPRTFECGPGKSLVTILNQVNKKAGDSAAKVPC
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MVPAVEPFALALKKATINDMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDANHIRRQLPKQIYKPVCWEQTLHILYERPQGNHFPRTFECGPGKSLVTILNQVNKKAGDSAAKVPC
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	116	2.2.26 [Sep-21-2011]
Q8T3L6	379	Probable malonyl-CoA-acyl	yes	N/A	0.853	0.261	0.543	2e-26
Q8IVS2	390	Malonyl-CoA-acyl carrier	yes	N/A	0.853	0.253	0.403	2e-16
Q8R3F5	381	Malonyl-CoA-acyl carrier	yes	N/A	0.853	0.259	0.385	1e-15
P0AAI9	309	Malonyl CoA-acyl carrier	N/A	N/A	0.827	0.310	0.295	0.0002
P0AAJ0	309	Malonyl CoA-acyl carrier	yes	N/A	0.827	0.310	0.295	0.0002
Q8X8I7	309	Malonyl CoA-acyl carrier	N/A	N/A	0.827	0.310	0.295	0.0002
O85140	309	Malonyl CoA-acyl carrier	yes	N/A	0.836	0.313	0.293	0.0004

>sp|Q8T3L6|FABD_DROME Probable malonyl-CoA-acyl carrier protein transacylase, mitochondrial OS=Drosophila melanogaster GN=beg PE=2 SV=2

 Score =  117 bits (294), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 62/114 (54%), Positives = 70/114 (61%), Gaps = 15/114 (13%)

Query: 1   MVPAVEPFALALKKATINDMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDANHIRRQLPK 60
           M  AVEPF  ALK   + D +I V+SNVDGK YR                A HI  QLPK
Sbjct: 279 MQSAVEPFTKALKTVRLQDPVIRVYSNVDGKPYR---------------HAKHILTQLPK 323

Query: 61  QIYKPVCWEQTLHILYERPQGNHFPRTFECGPGKSLVTILNQVNKKAGDSAAKV 114
           QI +PV WEQTLH +YER QG  FPRTFECGPGK LV +L +VN KA  S+  V
Sbjct: 324 QIVRPVKWEQTLHEMYERKQGVDFPRTFECGPGKGLVQVLEKVNAKAAQSSFNV 377

Catalyzes the transfer of a malonyl moiety from malonyl-CoA to the free thiol group of the phosphopantetheine arm of the ACP protein. This suggests the existence of the biosynthesis of fatty acids in mitochondrias.
Drosophila melanogaster (taxid: 7227)
EC: 2EC: .EC: 3EC: .EC: 1EC: .EC: 3EC: 9

>sp|Q8IVS2|FABD_HUMAN Malonyl-CoA-acyl carrier protein transacylase, mitochondrial OS=Homo sapiens GN=MCAT PE=1 SV=2

 Score = 84.3 bits (207), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 46/114 (40%), Positives = 59/114 (51%), Gaps = 15/114 (13%)

Query: 1   MVPAVEPFALALKKATINDMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDANHIRRQLPK 60
           M PAVEP   ALK   I   ++ V+SNV    YR                  HI + L +
Sbjct: 274 MEPAVEPLTQALKAVDIKKPLVSVYSNVHAHRYR---------------HPGHIHKLLAQ 318

Query: 61  QIYKPVCWEQTLHILYERPQGNHFPRTFECGPGKSLVTILNQVNKKAGDSAAKV 114
           Q+  PV WEQT+H +YER +G  FP+TFE GPG+ L  IL   N +A  S + V
Sbjct: 319 QLVSPVKWEQTMHAIYERKKGRGFPQTFEVGPGRQLGAILKSCNMQAWKSYSAV 372

Catalyzes the transfer of a malonyl moiety from malonyl-CoA to the free thiol group of the phosphopantetheine arm of the mitochondrial ACP protein (NDUFAB1). This suggests the existence of the biosynthesis of fatty acids in mitochondrias.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: 9

>sp|Q8R3F5|FABD_MOUSE Malonyl-CoA-acyl carrier protein transacylase, mitochondrial OS=Mus musculus GN=Mcat PE=2 SV=3

 Score = 81.6 bits (200), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 44/114 (38%), Positives = 60/114 (52%), Gaps = 15/114 (13%)

Query: 1   MVPAVEPFALALKKATINDMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDANHIRRQLPK 60
           M PAV+P    L    I   ++ VHSNV G+ Y                   HIR+ L +
Sbjct: 272 MEPAVDPLMKVLGSINIKKPLVAVHSNVSGQKYT---------------HPQHIRKLLGQ 316

Query: 61  QIYKPVCWEQTLHILYERPQGNHFPRTFECGPGKSLVTILNQVNKKAGDSAAKV 114
           Q+  PV WEQT+H +YER +G  FP T+E GPG+ L +IL   N++A  S + V
Sbjct: 317 QVVSPVKWEQTMHSIYERKKGMEFPSTYEVGPGQQLGSILKCCNRQAWKSYSHV 370

Catalyzes the transfer of a malonyl moiety from malonyl-CoA to the free thiol group of the phosphopantetheine arm of the mitochondrial ACP protein (NDUFAB1). This suggests the existence of the biosynthesis of fatty acids in mitochondrias.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: 9

>sp|P0AAI9|FABD_ECOLI Malonyl CoA-acyl carrier protein transacylase OS=Escherichia coli (strain K12) GN=fabD PE=1 SV=2

 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 49/115 (42%), Gaps = 19/115 (16%)

Query: 1   MVPAVEPFALALKKATINDMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDANHIRRQLPK 60
           M PA +  A+ L K T N   +PV +NVD K                  + + IR  L +
Sbjct: 205 MKPAADKLAVELAKITFNAPTVPVVNNVDVKCE---------------TNGDAIRDALVR 249

Query: 61  QIYKPVCWEQTLHILYERPQGNHFPRTFECGPGKSLVTILNQVNKKAGDSAAKVP 115
           Q+Y PV W +++   Y   QG      +E GPGK L  +  ++      SA   P
Sbjct: 250 QLYNPVQWTKSVE--YMAAQG--VEHLYEVGPGKVLTGLTKRIVDTLTASALNEP 300

Escherichia coli (strain K12) (taxid: 83333)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: 9

>sp|P0AAJ0|FABD_ECOL6 Malonyl CoA-acyl carrier protein transacylase OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=fabD PE=3 SV=2

 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 49/115 (42%), Gaps = 19/115 (16%)

Query: 1   MVPAVEPFALALKKATINDMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDANHIRRQLPK 60
           M PA +  A+ L K T N   +PV +NVD K                  + + IR  L +
Sbjct: 205 MKPAADKLAVELAKITFNAPTVPVVNNVDVKCE---------------TNGDAIRDALVR 249

Query: 61  QIYKPVCWEQTLHILYERPQGNHFPRTFECGPGKSLVTILNQVNKKAGDSAAKVP 115
           Q+Y PV W +++   Y   QG      +E GPGK L  +  ++      SA   P
Sbjct: 250 QLYNPVQWTKSVE--YMAAQG--VEHLYEVGPGKVLTGLTKRIVDTLTASALNEP 300

Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) (taxid: 199310)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: 9

>sp|Q8X8I7|FABD_ECO57 Malonyl CoA-acyl carrier protein transacylase OS=Escherichia coli O157:H7 GN=fabD PE=3 SV=3

 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 49/115 (42%), Gaps = 19/115 (16%)

Query: 1   MVPAVEPFALALKKATINDMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDANHIRRQLPK 60
           M PA +  A+ L K T N   +PV +NVD K                  + + IR  L +
Sbjct: 205 MKPAADKLAVELAKITFNAPTVPVVNNVDVKCE---------------TNGDAIRDALVR 249

Query: 61  QIYKPVCWEQTLHILYERPQGNHFPRTFECGPGKSLVTILNQVNKKAGDSAAKVP 115
           Q+Y PV W +++   Y   QG      +E GPGK L  +  ++      SA   P
Sbjct: 250 QLYNPVQWTKSVE--YMAAQG--VEHLYEVGPGKVLTGLTKRIVDTLTASALNEP 300

Escherichia coli O157:H7 (taxid: 83334)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: 9

>sp|O85140|FABD_SALTY Malonyl CoA-acyl carrier protein transacylase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=fabD PE=1 SV=3

 Score = 43.5 bits (101), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 34/116 (29%), Positives = 49/116 (42%), Gaps = 19/116 (16%)

Query: 1   MVPAVEPFALALKKATINDMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDANHIRRQLPK 60
           M PA +  A+ L K T +   +PV +NVD K                  DA  IR  L +
Sbjct: 205 MKPAADKLAVELAKITFSAPTVPVVNNVDVKCE---------------TDAAAIRDALVR 249

Query: 61  QIYKPVCWEQTLHILYERPQGNHFPRTFECGPGKSLVTILNQVNKKAGDSAAKVPC 116
           Q+Y PV W +++  +    QG      +E GPGK L  +  ++      SA   P 
Sbjct: 250 QLYNPVQWTKSVEFI--AAQG--VEHLYEVGPGKVLTGLTKRIVDTLTASALNEPA 301

Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (taxid: 99287)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: 9

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	116
158294542	397	AGAP005650-PA [Anopheles gambiae str. PE	0.853	0.249	0.596	1e-29
312373568	806	hypothetical protein AND_17290 [Anophele	0.853	0.122	0.587	2e-28
170070912	391	malonyl CoA-acyl carrier protein transac	0.853	0.253	0.605	2e-28
170058667	389	malonyl CoA-acyl carrier protein transac	0.853	0.254	0.605	2e-28
157126317	397	malonyl coa-acyl carrier protein transac	0.827	0.241	0.594	1e-26
91078278	406	PREDICTED: similar to AGAP005650-PA [Tri	0.793	0.226	0.560	2e-26
195135425	380	GI16803 [Drosophila mojavensis] gi|19391	0.853	0.260	0.561	8e-26
195375136	381	GJ12549 [Drosophila virilis] gi|19415351	0.853	0.259	0.561	8e-26
195012225	380	GH15526 [Drosophila grimshawi] gi|193897	0.853	0.260	0.561	1e-25
195494921	379	GE19897 [Drosophila yakuba] gi|194181147	0.853	0.261	0.543	3e-25

>gi|158294542|ref|XP_315668.4| AGAP005650-PA [Anopheles gambiae str. PEST] gi|157015611|gb|EAA11696.5| AGAP005650-PA [Anopheles gambiae str. PEST]

 Score =  133 bits (334), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 68/114 (59%), Positives = 74/114 (64%), Gaps = 15/114 (13%)

Query: 1   MVPAVEPFALALKKATINDMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDANHIRRQLPK 60
           M PAVEPFA ALKK  + D II VHSNVDGK Y+                A HI  QLPK
Sbjct: 297 MQPAVEPFAAALKKIRVEDPIISVHSNVDGKCYK---------------SAGHIVGQLPK 341

Query: 61  QIYKPVCWEQTLHILYERPQGNHFPRTFECGPGKSLVTILNQVNKKAGDSAAKV 114
           QI +PV WEQTLHI+YER QG HFPRTFECGPG+ L  IL QVN KA D+   V
Sbjct: 342 QIVRPVKWEQTLHIMYERKQGEHFPRTFECGPGRGLKAILKQVNAKAWDTTLNV 395

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|312373568|gb|EFR21283.1| hypothetical protein AND_17290 [Anopheles darlingi]

 Score =  129 bits (325), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 67/114 (58%), Positives = 73/114 (64%), Gaps = 15/114 (13%)

Query: 1   MVPAVEPFALALKKATINDMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDANHIRRQLPK 60
           M PAVEPFA AL+K  + + II VHSNVDGK Y+                A HI  QLPK
Sbjct: 706 MQPAVEPFAAALRKIRVEEPIINVHSNVDGKCYKS---------------AGHIVGQLPK 750

Query: 61  QIYKPVCWEQTLHILYERPQGNHFPRTFECGPGKSLVTILNQVNKKAGDSAAKV 114
           QI +PV WEQTLHI+YER  G HFPRTFECGPGK L  IL QVN KA DS   V
Sbjct: 751 QIVRPVKWEQTLHIMYERKAGEHFPRTFECGPGKGLKAILKQVNAKAWDSTLNV 804

Source: Anopheles darlingi

Species: Anopheles darlingi

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170070912|ref|XP_001869754.1| malonyl CoA-acyl carrier protein transacylase [Culex quinquefasciatus] gi|167866837|gb|EDS30220.1| malonyl CoA-acyl carrier protein transacylase [Culex quinquefasciatus]

 Score =  129 bits (324), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 69/114 (60%), Positives = 75/114 (65%), Gaps = 15/114 (13%)

Query: 1   MVPAVEPFALALKKATINDMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDANHIRRQLPK 60
           M  AVEPFA ALKK TI D II V+SNVDGK YR               +A HI  QLPK
Sbjct: 291 MASAVEPFAKALKKITIEDPIIGVYSNVDGKRYR---------------NAGHILGQLPK 335

Query: 61  QIYKPVCWEQTLHILYERPQGNHFPRTFECGPGKSLVTILNQVNKKAGDSAAKV 114
           QI +PV WEQTLH LYER  G +FPRTFECGPG+ L TIL QVN KA DSA  +
Sbjct: 336 QITRPVKWEQTLHNLYERKAGENFPRTFECGPGQGLKTILKQVNGKAWDSAFSI 389

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170058667|ref|XP_001865020.1| malonyl CoA-acyl carrier protein transacylase [Culex quinquefasciatus] gi|167877696|gb|EDS41079.1| malonyl CoA-acyl carrier protein transacylase [Culex quinquefasciatus]

 Score =  129 bits (324), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 69/114 (60%), Positives = 75/114 (65%), Gaps = 15/114 (13%)

Query: 1   MVPAVEPFALALKKATINDMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDANHIRRQLPK 60
           M  AVEPFA ALKK TI D II V+SNVDGK YR               +A HI  QLPK
Sbjct: 289 MASAVEPFAKALKKITIEDPIIGVYSNVDGKRYR---------------NAGHILGQLPK 333

Query: 61  QIYKPVCWEQTLHILYERPQGNHFPRTFECGPGKSLVTILNQVNKKAGDSAAKV 114
           QI +PV WEQTLH LYER  G +FPRTFECGPG+ L TIL QVN KA DSA  +
Sbjct: 334 QITRPVKWEQTLHNLYERKAGENFPRTFECGPGQGLKTILKQVNGKAWDSAFSI 387

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157126317|ref|XP_001654591.1| malonyl coa-acyl carrier protein transacylase [Aedes aegypti] gi|108882563|gb|EAT46788.1| AAEL002069-PA [Aedes aegypti]

 Score =  123 bits (309), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 66/111 (59%), Positives = 70/111 (63%), Gaps = 15/111 (13%)

Query: 1   MVPAVEPFALALKKATINDMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDANHIRRQLPK 60
           M  AVEPFA ALKK  I + II VHSNVDGK YR               +  HI  QLPK
Sbjct: 297 MASAVEPFARALKKIKIEEPIISVHSNVDGKRYR---------------NPGHILNQLPK 341

Query: 61  QIYKPVCWEQTLHILYERPQGNHFPRTFECGPGKSLVTILNQVNKKAGDSA 111
           QI +PV WEQTLH LYER  G  FPRTFECGPGK L  IL QVN KA DS+
Sbjct: 342 QIVRPVKWEQTLHNLYERKSGEFFPRTFECGPGKGLKAILKQVNAKAWDSS 392

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91078278|ref|XP_971673.1| PREDICTED: similar to AGAP005650-PA [Tribolium castaneum] gi|270003914|gb|EFA00362.1| hypothetical protein TcasGA2_TC003204 [Tribolium castaneum]

 Score =  122 bits (307), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 60/107 (56%), Positives = 74/107 (69%), Gaps = 15/107 (14%)

Query: 1   MVPAVEPFALALKKATINDMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDANHIRRQLPK 60
           M+PAVEPF  AL K+ +++ +I V+SNVDGK Y+               DA  I++QLPK
Sbjct: 306 MLPAVEPFRKALNKSEVSNPVISVYSNVDGKKYK---------------DAAQIKKQLPK 350

Query: 61  QIYKPVCWEQTLHILYERPQGNHFPRTFECGPGKSLVTILNQVNKKA 107
           QI KPV WEQ LH++YER QG++FPRTFECGPG SL  IL QVN KA
Sbjct: 351 QIVKPVKWEQLLHVVYERSQGDYFPRTFECGPGTSLRAILKQVNAKA 397

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195135425|ref|XP_002012133.1| GI16803 [Drosophila mojavensis] gi|193918397|gb|EDW17264.1| GI16803 [Drosophila mojavensis]

 Score =  120 bits (302), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 64/114 (56%), Positives = 74/114 (64%), Gaps = 15/114 (13%)

Query: 1   MVPAVEPFALALKKATINDMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDANHIRRQLPK 60
           M  AVEPFA ALK   + D II V+SNVDGK Y+               +A+HI RQLPK
Sbjct: 280 MESAVEPFAKALKSIRLQDPIIRVYSNVDGKPYK---------------NASHILRQLPK 324

Query: 61  QIYKPVCWEQTLHILYERPQGNHFPRTFECGPGKSLVTILNQVNKKAGDSAAKV 114
           QI KPV WEQTLH LYER QG  FPRTFECGPGK L+ +L +VN KA  ++  V
Sbjct: 325 QIVKPVKWEQTLHELYERRQGVDFPRTFECGPGKGLLQVLEKVNAKAAQTSFNV 378

Source: Drosophila mojavensis

Species: Drosophila mojavensis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195375136|ref|XP_002046359.1| GJ12549 [Drosophila virilis] gi|194153517|gb|EDW68701.1| GJ12549 [Drosophila virilis]

 Score =  120 bits (302), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 64/114 (56%), Positives = 73/114 (64%), Gaps = 15/114 (13%)

Query: 1   MVPAVEPFALALKKATINDMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDANHIRRQLPK 60
           M  AVEPF+ ALK   + D II V+SNVDGK YR               +A HI RQLPK
Sbjct: 281 MDSAVEPFSKALKAIRLQDPIIRVYSNVDGKPYR---------------NATHILRQLPK 325

Query: 61  QIYKPVCWEQTLHILYERPQGNHFPRTFECGPGKSLVTILNQVNKKAGDSAAKV 114
           QI +PV WEQTLH LYER QG  FPRTFECGPGK L+ +L +VN KA  +A  V
Sbjct: 326 QIVRPVKWEQTLHELYERRQGVDFPRTFECGPGKGLLQVLEKVNAKAAQTAFNV 379

Source: Drosophila virilis

Species: Drosophila virilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195012225|ref|XP_001983537.1| GH15526 [Drosophila grimshawi] gi|193897019|gb|EDV95885.1| GH15526 [Drosophila grimshawi]

 Score =  120 bits (301), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 64/114 (56%), Positives = 71/114 (62%), Gaps = 15/114 (13%)

Query: 1   MVPAVEPFALALKKATINDMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDANHIRRQLPK 60
           M  AVEPFA ALK   + D II V+SNVDGK Y+                A HI RQLPK
Sbjct: 280 MQSAVEPFAKALKSIRLQDPIIRVYSNVDGKPYK---------------HATHILRQLPK 324

Query: 61  QIYKPVCWEQTLHILYERPQGNHFPRTFECGPGKSLVTILNQVNKKAGDSAAKV 114
           QI +PV WEQTLH LYER QG  FPRTFECGPGK L  +L +VN KA  +A  V
Sbjct: 325 QIVRPVKWEQTLHELYERRQGADFPRTFECGPGKGLTQVLEKVNAKAAQTAHNV 378

Source: Drosophila grimshawi

Species: Drosophila grimshawi

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195494921|ref|XP_002095046.1| GE19897 [Drosophila yakuba] gi|194181147|gb|EDW94758.1| GE19897 [Drosophila yakuba]

 Score =  118 bits (296), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 62/114 (54%), Positives = 71/114 (62%), Gaps = 15/114 (13%)

Query: 1   MVPAVEPFALALKKATINDMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDANHIRRQLPK 60
           M+ AVEPF  ALK   + D +I V+SNVDGK YR                A HI  QLPK
Sbjct: 279 MLSAVEPFTKALKSVRLQDPVIRVYSNVDGKPYR---------------HAKHILTQLPK 323

Query: 61  QIYKPVCWEQTLHILYERPQGNHFPRTFECGPGKSLVTILNQVNKKAGDSAAKV 114
           QI +PV WEQTLH +YER QG  FPRTFECGPGK LV +L +VN KA  S+  V
Sbjct: 324 QIVRPVKWEQTLHEMYERKQGVDFPRTFECGPGKGLVQVLEKVNAKAAQSSFNV 377

Source: Drosophila yakuba

Species: Drosophila yakuba

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	116
FB|FBgn0036691	379	beg "bad egg" [Drosophila mela	0.853	0.261	0.543	5.3e-24
UNIPROTKB|F1SJS0	384	LOC100523602 "Uncharacterized	0.853	0.257	0.429	3.4e-16
ZFIN|ZDB-GENE-041111-231	364	mcat "malonyl CoA:ACP acyltran	0.793	0.252	0.448	3.6e-16
UNIPROTKB|F1PUF5	384	MCAT "Uncharacterized protein"	0.853	0.257	0.412	5.7e-16
UNIPROTKB|F1NZA8	375	F1NZA8 "Uncharacterized protei	0.793	0.245	0.439	1.1e-15
UNIPROTKB|E1BPG0	387	MCAT "Uncharacterized protein"	0.853	0.255	0.412	1.3e-15
UNIPROTKB|Q8IVS2	390	MCAT "Malonyl-CoA-acyl carrier	0.853	0.253	0.403	1.7e-14
RGD|1306698	380	Mcat "malonyl CoA:ACP acyltran	0.853	0.260	0.403	2e-14
MGI|MGI:2388651	381	Mcat "malonyl CoA:ACP acyltran	0.853	0.259	0.385	7.2e-14
WB|WBGene00016812	411	C50D2.9 [Caenorhabditis elegan	0.741	0.209	0.35	2.7e-05

FB|FBgn0036691 beg "bad egg" [Drosophila melanogaster (taxid:7227)]

 Score = 275 (101.9 bits), Expect = 5.3e-24, P = 5.3e-24
 Identities = 62/114 (54%), Positives = 70/114 (61%)

Query:     1 MVPAVEPFALALKKATINDMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDANHIRRQLPK 60
             M  AVEPF  ALK   + D +I V+SNVDGK YR                A HI  QLPK
Sbjct:   279 MQSAVEPFTKALKTVRLQDPVIRVYSNVDGKPYR---------------HAKHILTQLPK 323

Query:    61 QIYKPVCWEQTLHILYERPQGNHFPRTFECGPGKSLVTILNQVNKKAGDSAAKV 114
             QI +PV WEQTLH +YER QG  FPRTFECGPGK LV +L +VN KA  S+  V
Sbjct:   324 QIVRPVKWEQTLHEMYERKQGVDFPRTFECGPGKGLVQVLEKVNAKAAQSSFNV 377

GO:0005739 "mitochondrion" evidence=ISS

GO:0004314 "[acyl-carrier-protein

GO:0006633 "fatty acid biosynthetic process" evidence=ISS

UNIPROTKB|F1SJS0 LOC100523602 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 206 (77.6 bits), Expect = 3.4e-16, P = 3.4e-16
 Identities = 49/114 (42%), Positives = 63/114 (55%)

Query:     1 MVPAVEPFALALKKATINDMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDANHIRRQLPK 60
             M PA+EP A  LK   +   ++ VHSNV G      NK         +    HIR+ L +
Sbjct:   273 MEPALEPLAHVLKDIDLKKPLVSVHSNVTG------NK---------YMHPKHIRQLLVQ 317

Query:    61 QIYKPVCWEQTLHILYERPQGNHFPRTFECGPGKSLVTILNQVNKKAGDSAAKV 114
             Q+  PV WEQT+H +YER +G  FP+TFE GPGK L TIL   N +A  S + V
Sbjct:   318 QVVSPVKWEQTMHAIYERRKGTDFPKTFEVGPGKQLGTILKSCNLQAWKSYSHV 371

GO:0005739 "mitochondrion" evidence=IEA

GO:0004314 "[acyl-carrier-protein

ZFIN|ZDB-GENE-041111-231 mcat "malonyl CoA:ACP acyltransferase (mitochondrial)" [Danio rerio (taxid:7955)]

 Score = 205 (77.2 bits), Expect = 3.6e-16, P = 3.6e-16
 Identities = 48/107 (44%), Positives = 59/107 (55%)

Query:     1 MVPAVEPFALALKKATINDMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDANHIRRQLPK 60
             M  AVEP    L+K  +    I VHSNVDGK Y  +                HIR QL K
Sbjct:   259 MEAAVEPLRDVLRKIEVRRPEISVHSNVDGKRYMHDK---------------HIRNQLAK 303

Query:    61 QIYKPVCWEQTLHILYERPQGNHFPRTFECGPGKSLVTILNQVNKKA 107
             Q+  PV WEQTLH +Y+R QG  FP T+E GPG+ L ++L + N KA
Sbjct:   304 QLVSPVKWEQTLHEIYQRAQGQEFPHTYEVGPGRHLGSMLQKCNMKA 350

GO:0003824 "catalytic activity" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016746 "transferase activity, transferring acyl groups" evidence=IEA

UNIPROTKB|F1PUF5 MCAT "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 204 (76.9 bits), Expect = 5.7e-16, P = 5.7e-16
 Identities = 47/114 (41%), Positives = 60/114 (52%)

Query:     1 MVPAVEPFALALKKATINDMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDANHIRRQLPK 60
             M PA+EP    LK   +   ++ VHSNVDGK Y                   HI++ L +
Sbjct:   276 MEPALEPLTQVLKSVGVKKPLVSVHSNVDGKRYM---------------HPKHIQKLLVQ 320

Query:    61 QIYKPVCWEQTLHILYERPQGNHFPRTFECGPGKSLVTILNQVNKKAGDSAAKV 114
             Q+  PV WEQT+H +YER +G  FP+TFE GPGK L  IL   N +A  S   V
Sbjct:   321 QVVSPVKWEQTMHAIYERKKGVEFPKTFEVGPGKQLGAILKSCNLQAWKSYQNV 374

GO:0016740 "transferase activity" evidence=IEA

UNIPROTKB|F1NZA8 F1NZA8 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 201 (75.8 bits), Expect = 1.1e-15, P = 1.1e-15
 Identities = 47/107 (43%), Positives = 59/107 (55%)

Query:     1 MVPAVEPFALALKKATINDMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDANHIRRQLPK 60
             M PAVEP A  LK   I   +I V+SNVD K Y                 + HI++ L K
Sbjct:   266 MEPAVEPLAEVLKSIEIQKPLICVYSNVDSKKYM---------------HSKHIQKLLVK 310

Query:    61 QIYKPVCWEQTLHILYERPQGNHFPRTFECGPGKSLVTILNQVNKKA 107
             Q+  PV WEQT+H +Y+R QG  FP T+E GPGK L  +L + N KA
Sbjct:   311 QLVSPVLWEQTMHSMYQRKQGMEFPYTYEVGPGKQLGAVLRKCNLKA 357

GO:0004314 "[acyl-carrier-protein

GO:0005739 "mitochondrion" evidence=IEA

UNIPROTKB|E1BPG0 MCAT "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 201 (75.8 bits), Expect = 1.3e-15, P = 1.3e-15
 Identities = 47/114 (41%), Positives = 60/114 (52%)

Query:     1 MVPAVEPFALALKKATINDMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDANHIRRQLPK 60
             M PAVEP    LK   +   ++ VHSNVDG  Y                   HI++ L +
Sbjct:   276 MEPAVEPLVQVLKAIDVKKPLVSVHSNVDGNRYM---------------HPKHIQKLLAQ 320

Query:    61 QIYKPVCWEQTLHILYERPQGNHFPRTFECGPGKSLVTILNQVNKKAGDSAAKV 114
             Q+  PV WEQT+H +YER +G  FP+TFE GPGK L  IL   N +A  S + V
Sbjct:   321 QVVSPVKWEQTMHAIYERRKGTAFPQTFEVGPGKQLGAILRSCNLQAWRSYSHV 374

GO:0005739 "mitochondrion" evidence=IEA

GO:0004314 "[acyl-carrier-protein

UNIPROTKB|Q8IVS2 MCAT "Malonyl-CoA-acyl carrier protein transacylase, mitochondrial" [Homo sapiens (taxid:9606)]

 Score = 191 (72.3 bits), Expect = 1.7e-14, P = 1.7e-14
 Identities = 46/114 (40%), Positives = 59/114 (51%)

Query:     1 MVPAVEPFALALKKATINDMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDANHIRRQLPK 60
             M PAVEP   ALK   I   ++ V+SNV    YR                  HI + L +
Sbjct:   274 MEPAVEPLTQALKAVDIKKPLVSVYSNVHAHRYR---------------HPGHIHKLLAQ 318

Query:    61 QIYKPVCWEQTLHILYERPQGNHFPRTFECGPGKSLVTILNQVNKKAGDSAAKV 114
             Q+  PV WEQT+H +YER +G  FP+TFE GPG+ L  IL   N +A  S + V
Sbjct:   319 QLVSPVKWEQTMHAIYERKKGRGFPQTFEVGPGRQLGAILKSCNMQAWKSYSAV 372

GO:0005739 "mitochondrion" evidence=IDA

GO:0008152 "metabolic process" evidence=IDA

GO:0006633 "fatty acid biosynthetic process" evidence=IEA;IDA

GO:0016740 "transferase activity" evidence=IDA

GO:0004314 "[acyl-carrier-protein

RGD|1306698 Mcat "malonyl CoA:ACP acyltransferase (mitochondrial)" [Rattus norvegicus (taxid:10116)]

 Score = 190 (71.9 bits), Expect = 2.0e-14, P = 2.0e-14
 Identities = 46/114 (40%), Positives = 59/114 (51%)

Query:     1 MVPAVEPFALALKKATINDMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDANHIRRQLPK 60
             M PAVEP    L    I   ++ VHSNV G  Y                   HIR+ L +
Sbjct:   271 MEPAVEPLMKTLGSINIKKPLVAVHSNVSGHKYT---------------HPQHIRKLLGQ 315

Query:    61 QIYKPVCWEQTLHILYERPQGNHFPRTFECGPGKSLVTILNQVNKKAGDSAAKV 114
             Q+  PV WEQT+H +YER +G  FP TFE GPG+ L +IL   N++A  S + V
Sbjct:   316 QVVSPVKWEQTMHCIYERKKGMEFPSTFEVGPGQQLGSILKCCNRQAWKSYSHV 369

GO:0004314 "[acyl-carrier-protein

GO:0005739 "mitochondrion" evidence=IEA;ISO

GO:0006633 "fatty acid biosynthetic process" evidence=ISO

GO:0008152 "metabolic process" evidence=ISO

GO:0016740 "transferase activity" evidence=ISO

MGI|MGI:2388651 Mcat "malonyl CoA:ACP acyltransferase (mitochondrial)" [Mus musculus (taxid:10090)]

 Score = 185 (70.2 bits), Expect = 7.2e-14, P = 7.2e-14
 Identities = 44/114 (38%), Positives = 60/114 (52%)

Query:     1 MVPAVEPFALALKKATINDMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDANHIRRQLPK 60
             M PAV+P    L    I   ++ VHSNV G+ Y                   HIR+ L +
Sbjct:   272 MEPAVDPLMKVLGSINIKKPLVAVHSNVSGQKYT---------------HPQHIRKLLGQ 316

Query:    61 QIYKPVCWEQTLHILYERPQGNHFPRTFECGPGKSLVTILNQVNKKAGDSAAKV 114
             Q+  PV WEQT+H +YER +G  FP T+E GPG+ L +IL   N++A  S + V
Sbjct:   317 QVVSPVKWEQTMHSIYERKKGMEFPSTYEVGPGQQLGSILKCCNRQAWKSYSHV 370

GO:0003824 "catalytic activity" evidence=IEA

GO:0004314 "[acyl-carrier-protein

GO:0005739 "mitochondrion" evidence=ISO;IDA

GO:0006629 "lipid metabolic process" evidence=IEA

GO:0006631 "fatty acid metabolic process" evidence=IEA

GO:0006633 "fatty acid biosynthetic process" evidence=ISO

GO:0008152 "metabolic process" evidence=ISO

GO:0016740 "transferase activity" evidence=ISO

WB|WBGene00016812 C50D2.9 [Caenorhabditis elegans (taxid:6239)]

 Score = 107 (42.7 bits), Expect = 2.7e-05, P = 2.7e-05
 Identities = 35/100 (35%), Positives = 46/100 (46%)

Query:     1 MVPAVEPFALALKKATINDMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDANHIRRQLPK 60
             M  AVE  A A +   I+  +  V SN  GK+           +SS   D   +R  + K
Sbjct:   304 MESAVEQVAKAFQNVEIHRPVCNVWSNYSGKV-----------MSSKKGD---VRGAVAK 349

Query:    61 QIYKPVCWEQTLHILYERPQGNHFPRTFECGPGKSLVTIL 100
             QI  PV WEQ    L+ + Q   FPR +E G G+ LV  L
Sbjct:   350 QINSPVRWEQIQQSLFRKHQNEAFPRFYEVGAGRQLVAEL 389

GO:0016021 "integral to membrane" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q8T3L6	FABD_DROME	2, ., 3, ., 1, ., 3, 9	0.5438	0.8534	0.2612	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	116
PLN02752	343	PLN02752, PLN02752, [acyl-carrier protein] S-malon	2e-13
COG0331	310	COG0331, FabD, (acyl-carrier-protein) S-malonyltra	2e-13
TIGR00128	290	TIGR00128, fabD, malonyl CoA-acyl carrier protein	2e-08
TIGR03131	295	TIGR03131, malonate_mdcH, malonate decarboxylase,	3e-07
smart00827	298	smart00827, PKS_AT, Acyl transferase domain in pol	0.003

>gnl|CDD|215401 PLN02752, PLN02752, [acyl-carrier protein] S-malonyltransferase

 Score = 64.8 bits (158), Expect = 2e-13
 Identities = 33/107 (30%), Positives = 47/107 (43%), Gaps = 19/107 (17%)

Query: 1   MVPAVEPFALALKKATINDMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDANHIRRQLPK 60
           M PAV+    AL    I    IPV SNVD +                  D   I++ L +
Sbjct: 249 MEPAVDALEAALAAVEIRTPRIPVISNVDAQP---------------HSDPATIKKILAR 293

Query: 61  QIYKPVCWEQTLHILYERPQGNHFPRTFECGPGKSLVTILNQVNKKA 107
           Q+  PV WE T+  L          +++E GPGK +  I+ +V+K A
Sbjct: 294 QVTSPVQWETTVKTL----LEKGLEKSYELGPGKVIAGIVKRVDKGA 336

Length = 343

>gnl|CDD|223408 COG0331, FabD, (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]

 Score = 63.8 bits (156), Expect = 2e-13
 Identities = 36/115 (31%), Positives = 47/115 (40%), Gaps = 19/115 (16%)

Query: 1   MVPAVEPFALALKKATINDMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDANHIRRQLPK 60
           M PA +  A AL+K   +D ++PV SNVD K                  D   IR  L K
Sbjct: 206 MKPAADELAEALEKVRFSDPLVPVISNVDAKPV---------------LDGEEIRELLAK 250

Query: 61  QIYKPVCWEQTLHILYERPQGNHFPRTFECGPGKSLVTILNQVNKKAGDSAAKVP 115
           Q+  PV W +T+  L        F    E GPGK L  +  ++ K  G  A    
Sbjct: 251 QLTSPVRWTETVETLKAD-GVTRF---VEIGPGKVLTGLAKRILKGLGVRAVGSL 301

Length = 310

>gnl|CDD|232839 TIGR00128, fabD, malonyl CoA-acyl carrier protein transacylase

 Score = 50.2 bits (120), Expect = 2e-08
 Identities = 33/107 (30%), Positives = 46/107 (42%), Gaps = 19/107 (17%)

Query: 1   MVPAVEPFALALKKATINDMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDANHIRRQLPK 60
           M PA E FA  L+    ND  +PV SNVD K Y   N +              I+ +L +
Sbjct: 203 MKPAAEKFAETLEACQFNDPTVPVISNVDAKPY--TNGD-------------RIKEKLSE 247

Query: 61  QIYKPVCWEQTLHILYERPQGNHFPRTFECGPGKSLVTILNQVNKKA 107
           Q+  PV W  ++  L  R     F    E GPGK L  ++ ++    
Sbjct: 248 QLTSPVRWTDSVEKLMARGV-TEF---AEVGPGKVLTGLIKRIKNDL 290

This enzyme of fatty acid biosynthesis transfers the malonyl moeity from coenzyme A to acyl-carrier protein. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 290

>gnl|CDD|132175 TIGR03131, malonate_mdcH, malonate decarboxylase, epsilon subunit

 Score = 46.9 bits (112), Expect = 3e-07
 Identities = 31/103 (30%), Positives = 40/103 (38%), Gaps = 21/103 (20%)

Query: 4   AVEPFALALKKATINDMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDANHIRRQLPKQIY 63
           A E FA AL +  +    +P  S +D +               L RDA  IR  L +QI 
Sbjct: 195 AAEQFAEALAEIPLAAPRLPYLSGIDAR---------------LVRDAAQIRDDLARQIA 239

Query: 64  KPVCWEQTLHILYERPQGNHFPRTF-ECGPGKSLVTILNQVNK 105
            PV W   +   YER       R   E GPG  L  + N+   
Sbjct: 240 TPVDWHDCMQAAYERG-----ARLVIELGPGDVLTKLANEAFP 277

Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group. Length = 295

>gnl|CDD|214838 smart00827, PKS_AT, Acyl transferase domain in polyketide synthase (PKS) enzymes

 Score = 35.1 bits (82), Expect = 0.003
 Identities = 28/113 (24%), Positives = 39/113 (34%), Gaps = 19/113 (16%)

Query: 1   MVPAVEPFALALKKATINDMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDANHIRRQLPK 60
           M P ++ F  AL   T     IP  S V G +  G              DA++  R L  
Sbjct: 197 MEPILDEFRAALAGLTPRPPRIPFVSTVTGTLIDGAE----------LDDADYWVRNL-- 244

Query: 61  QIYKPVCWEQTLHILYERPQGNHFPRTF-ECGPGKSLVTILNQVNKKAGDSAA 112
              +PV +   +  L    +G      F E GP   L   + Q    AG +  
Sbjct: 245 --REPVRFADAVRALLA--EGGV--TVFLEVGPHPVLTGPIKQTLAAAGSAVV 291

Length = 298

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	116
KOG2926|consensus	386		99.82
COG0331	310	FabD (acyl-carrier-protein) S-malonyltransferase [	99.79
PF00698	318	Acyl_transf_1: Acyl transferase domain; InterPro:	99.79
PLN02752	343	[acyl-carrier protein] S-malonyltransferase	99.77
TIGR03131	295	malonate_mdcH malonate decarboxylase, epsilon subu	99.75
TIGR00128	290	fabD malonyl CoA-acyl carrier protein transacylase	99.74
smart00827	298	PKS_AT Acyl transferase domain in polyketide synth	99.71
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	99.67
TIGR02816	538	pfaB_fam PfaB family protein. The protein PfaB is	99.57
COG3321	1061	Polyketide synthase modules and related proteins [	99.1
KOG1202|consensus	2376		94.02

>KOG2926|consensus

Probab=99.82  E-value=3.6e-20  Score=149.06  Aligned_cols=94  Identities=56%  Similarity=0.897  Sum_probs=88.3

Q ss_pred             CccchHHHHHHHhcCCCCCCCccEEeCCCCccccccccchhhhcccccCCHHHHHhHHHHhhcCCcCHHHHHHHHHhCCC
Q psy13429          1 MVPAVEPFALALKKATINDMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDANHIRRQLPKQIYKPVCWEQTLHILYERPQ   80 (116)
Q Consensus         1 M~pa~~~~~~~l~~~~~~~p~ipviSnv~g~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ql~~PV~w~~~i~~l~~~~~   80 (116)
                      |+||+++|.++|+.+.++.|.+|||||++|++++               ++.+|+..|++|+.+||+|+++++++.++ +
T Consensus       273 MepAvepl~~Al~~vei~~p~~pViSNvdg~~~~---------------~~~hi~~~l~kQ~~rPV~we~~~~ti~sk-~  336 (386)
T KOG2926|consen  273 MEPAVEPLTKALKAVEIKNPVIPVISNVDGKPYR---------------DPGHILKQLAKQIVRPVQWEQTLKTIYSK-Q  336 (386)
T ss_pred             hhhhHHHHHHHHHHHHhcCCCcceeecCCCcccC---------------ChHHHHHHHHHHhcCchhHHHHHHHHHhc-C
Confidence            8999999999999999999999999999999999               89999999999999999999999999987 5


Q ss_pred             CCccCcEEEeCCCHHHHHHHHHHhhhcCCC
Q psy13429         81 GNHFPRTFECGPGKSLVTILNQVNKKAGDS  110 (116)
Q Consensus        81 g~~f~~~iEiGPg~~L~~l~k~~~~~~~~~  110 (116)
                      |+-|++++|+|||++|.+++++..+++...
T Consensus       337 ~~g~~~sye~GPG~~l~~ilk~~~~~a~~~  366 (386)
T KOG2926|consen  337 GVGFPRSYEVGPGRVLVAILKRNNPQADFS  366 (386)
T ss_pred             CCCCCceEeeCCcHHHHHHHHHhCchhhhh
Confidence            777788999999999999999998876553

>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]

Probab=99.79  E-value=3e-19  Score=142.53  Aligned_cols=92  Identities=40%  Similarity=0.580  Sum_probs=85.8

Q ss_pred             CccchHHHHHHHhcCCCCCCCccEEeCCCCccccccccchhhhcccccCCHHHHHhHHHHhhcCCcCHHHHHHHHHhCCC
Q psy13429          1 MVPAVEPFALALKKATINDMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDANHIRRQLPKQIYKPVCWEQTLHILYERPQ   80 (116)
Q Consensus         1 M~pa~~~~~~~l~~~~~~~p~ipviSnv~g~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ql~~PV~w~~~i~~l~~~~~   80 (116)
                      |+|+.++|+..|..+.|++|.+|+++|+++.++.               +.+.+++.|.+|+++||+|.+++..|.+.  
T Consensus       206 m~pa~~~~~~~l~~~~~~~~~ipvi~n~~~~~~~---------------~~~~i~~~L~~q~~~pVrW~etv~~l~~~--  268 (310)
T COG0331         206 MKPAADELAEALEKVRFSDPLVPVISNVDAKPVL---------------DGEEIRELLAKQLTSPVRWTETVETLKAD--  268 (310)
T ss_pred             hHHHHHHHHHHHHhcCCCCccceeeecccccccc---------------CHHHHHHHHHHHhcCCeeHHHHHHHHHhc--
Confidence            7899999999999999999999999999999987               89999999999999999999999999987  


Q ss_pred             CCccCcEEEeCCCHHHHHHHHHHhhhcCCCc
Q psy13429         81 GNHFPRTFECGPGKSLVTILNQVNKKAGDSA  111 (116)
Q Consensus        81 g~~f~~~iEiGPg~~L~~l~k~~~~~~~~~~  111 (116)
                      |+  +.|+|+|||++|++|+|++.++.+...
T Consensus       269 gv--~~~~EiGpg~vL~gL~kri~~~~~~~~  297 (310)
T COG0331         269 GV--TRFVEIGPGKVLTGLAKRILKGLGVRA  297 (310)
T ss_pred             Cc--eEEEEeCCcHHHHHHHHhhcCCCCcee
Confidence            89  555999999999999999998876544

>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2

Probab=99.79  E-value=2.6e-19  Score=141.04  Aligned_cols=87  Identities=33%  Similarity=0.537  Sum_probs=81.5

Q ss_pred             CccchHHHHHHHhcCCCCCCCccEEeCCCCccccccccchhhhcccccCCHHHHHhHHHHhhcCCcCHHHHHHHHHhCCC
Q psy13429          1 MVPAVEPFALALKKATINDMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDANHIRRQLPKQIYKPVCWEQTLHILYERPQ   80 (116)
Q Consensus         1 M~pa~~~~~~~l~~~~~~~p~ipviSnv~g~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ql~~PV~w~~~i~~l~~~~~   80 (116)
                      |+|+.++|++.++.+.+++|++|++||++|+++.               +.+..++||.+|+++||+|.++++.|.+.  
T Consensus       196 m~~~~~~~~~~l~~~~~~~p~ip~~S~~~g~~~~---------------~~~~~~~~~~~~l~~pV~f~~~v~~l~~~--  258 (318)
T PF00698_consen  196 MEPAADEFREALESIEFRPPKIPVYSNVTGRPYD---------------DPELIAEYWARQLRSPVRFREAVEALYED--  258 (318)
T ss_dssp             GHHHHHHHHHHHHTSCSCCCSSEEEETTTSSBEH---------------SHHHHHHHHHHHHHSHEEHHHHHHHHHHT--
T ss_pred             hhhhHHHHHhhhhccccccccccceeeccccccc---------------ccccchhHHHhccCCcCChHHHHHHHHhc--
Confidence            7899999999999999999999999999999997               77778999999999999999999999887  


Q ss_pred             CCccCcEEEeCCCHHHHHHHHHHhhh
Q psy13429         81 GNHFPRTFECGPGKSLVTILNQVNKK  106 (116)
Q Consensus        81 g~~f~~~iEiGPg~~L~~l~k~~~~~  106 (116)
                      |+  +.|||+|||++|++++++++++
T Consensus       259 g~--~~fiEiGP~~~L~~~~~~~l~~  282 (318)
T PF00698_consen  259 GV--RVFIEIGPGSVLTSLVKRILKS  282 (318)
T ss_dssp             TE--EEEEEESSSSHHHHHHHHHSTS
T ss_pred             CC--CEEEEeCchHHHHHHHHHHHhh
Confidence            88  5569999999999999999983

3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....

>PLN02752 [acyl-carrier protein] S-malonyltransferase

Probab=99.77  E-value=9.3e-19  Score=139.63  Aligned_cols=88  Identities=40%  Similarity=0.644  Sum_probs=81.5

Q ss_pred             CccchHHHHHHHhcCCCCCCCccEEeCCCCccccccccchhhhcccccCCHHHHHhHHHHhhcCCcCHHHHHHHHHhCCC
Q psy13429          1 MVPAVEPFALALKKATINDMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDANHIRRQLPKQIYKPVCWEQTLHILYERPQ   80 (116)
Q Consensus         1 M~pa~~~~~~~l~~~~~~~p~ipviSnv~g~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ql~~PV~w~~~i~~l~~~~~   80 (116)
                      |+|+.+.|.+.++.+.+++|++|++||++|+++.               +.+.++++|.+|+++||+|.++++.|.+.  
T Consensus       249 m~~~~~~l~~~l~~~~~~~p~ipviS~~tg~~~~---------------~~~~~~~~l~~~l~~PV~~~~~i~~l~~~--  311 (343)
T PLN02752        249 MEPAVDALEAALAAVEIRTPRIPVISNVDAQPHS---------------DPATIKKILARQVTSPVQWETTVKTLLEK--  311 (343)
T ss_pred             HHHHHHHHHHHHhcCCCCCCCceEEEcCCCCccC---------------ChHHHHHHHHHHCcCCEEHHHHHHHHHHC--
Confidence            6788999999999999999999999999999998               77889999999999999999999999987  


Q ss_pred             CCccCcEEEeCCCHHHHHHHHHHhhhc
Q psy13429         81 GNHFPRTFECGPGKSLVTILNQVNKKA  107 (116)
Q Consensus        81 g~~f~~~iEiGPg~~L~~l~k~~~~~~  107 (116)
                      |+  +.|||+|||++|++|++++.++.
T Consensus       312 g~--~~~iEiGP~~~L~~l~~~~~~~~  336 (343)
T PLN02752        312 GL--EKSYELGPGKVIAGIVKRVDKGA  336 (343)
T ss_pred             CC--CEEEEeCCcHHHHHHHHHhhCCC
Confidence            88  55699999999999999997654

>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit

Probab=99.75  E-value=3.8e-18  Score=132.73  Aligned_cols=88  Identities=34%  Similarity=0.569  Sum_probs=81.3

Q ss_pred             CccchHHHHHHHhcCCCCCCCccEEeCCCCccccccccchhhhcccccCCHHHHHhHHHHhhcCCcCHHHHHHHHHhCCC
Q psy13429          1 MVPAVEPFALALKKATINDMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDANHIRRQLPKQIYKPVCWEQTLHILYERPQ   80 (116)
Q Consensus         1 M~pa~~~~~~~l~~~~~~~p~ipviSnv~g~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ql~~PV~w~~~i~~l~~~~~   80 (116)
                      |+++.++|...++.+++++|++|++||++|+.+.               +.+.+++||.+|+++||+|.++++.+.+.  
T Consensus       192 ~~~~~~~~~~~l~~~~~~~~~ip~~S~~~g~~~~---------------~~~~~~~~~~~~l~~pV~~~~~i~~l~~~--  254 (295)
T TIGR03131       192 LAKAAEQFAEALAEIPLAAPRLPYLSGIDARLVR---------------DAAQIRDDLARQIATPVDWHDCMQAAYER--  254 (295)
T ss_pred             HHHHHHHHHHHHhcCCCCCCCceEEECCCCeecC---------------CHHHHHHHHHHHhcCCCcHHHHHHHHHHc--
Confidence            6788999999999999999999999999999997               77888999999999999999999999987  


Q ss_pred             CCccCcEEEeCCCHHHHHHHHHHhhhc
Q psy13429         81 GNHFPRTFECGPGKSLVTILNQVNKKA  107 (116)
Q Consensus        81 g~~f~~~iEiGPg~~L~~l~k~~~~~~  107 (116)
                      |+  +.|||+|||++|+++++++.++.
T Consensus       255 g~--~~~veiGp~~~l~~~~~~~~~~~  279 (295)
T TIGR03131       255 GA--RLVIELGPGDVLTKLANEAFPEL  279 (295)
T ss_pred             CC--CEEEEeCChHHHHHHHHHhcCCC
Confidence            88  55699999999999999998765

Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.

>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase

Probab=99.74  E-value=8.7e-18  Score=129.33  Aligned_cols=87  Identities=37%  Similarity=0.651  Sum_probs=79.7

Q ss_pred             CccchHHHHHHHhcCCCCCCCccEEeCCCCccccccccchhhhcccccCCHHHHHhHHHHhhcCCcCHHHHHHHHHhCCC
Q psy13429          1 MVPAVEPFALALKKATINDMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDANHIRRQLPKQIYKPVCWEQTLHILYERPQ   80 (116)
Q Consensus         1 M~pa~~~~~~~l~~~~~~~p~ipviSnv~g~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ql~~PV~w~~~i~~l~~~~~   80 (116)
                      |+++.+.|++.++.+.+++|++|++||++|+.+.               +.+.++++|.+|+++||+|.++++.+.+.  
T Consensus       203 l~~~~~~~~~~l~~~~~~~p~ipi~S~~~g~~~~---------------~~~~~~~~~~~~l~~pV~f~~~i~~l~~~--  265 (290)
T TIGR00128       203 MKPAAEKFAETLEACQFNDPTVPVISNVDAKPYT---------------NGDRIKEKLSEQLTSPVRWTDSVEKLMAR--  265 (290)
T ss_pred             HHHHHHHHHHHHHcCCCCCCCccEEECCCCCccC---------------CHHHHHHHHHHHccCCccHHHHHHHHHHC--
Confidence            5678889999999999999999999999999997               67788999999999999999999999987  


Q ss_pred             CCccCcEEEeCCCHHHHHHHHHHhhh
Q psy13429         81 GNHFPRTFECGPGKSLVTILNQVNKK  106 (116)
Q Consensus        81 g~~f~~~iEiGPg~~L~~l~k~~~~~  106 (116)
                      |+  +.|||+|||++|+++++++.++
T Consensus       266 g~--~~~ie~gp~~~l~~~~~~~~~~  289 (290)
T TIGR00128       266 GV--TEFAEVGPGKVLTGLIKRIKND  289 (290)
T ss_pred             CC--CEEEEECCchHHHHHHHHhcCC
Confidence            88  5569999999999999998654

The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.

>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes

Probab=99.71  E-value=2.9e-17  Score=127.04  Aligned_cols=89  Identities=26%  Similarity=0.333  Sum_probs=79.5

Q ss_pred             CccchHHHHHHHhcCCCCCCCccEEeCCCCccccccccchhhhcccccCCHHHH-HhHHHHhhcCCcCHHHHHHHHHh-C
Q psy13429          1 MVPAVEPFALALKKATINDMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDANHI-RRQLPKQIYKPVCWEQTLHILYE-R   78 (116)
Q Consensus         1 M~pa~~~~~~~l~~~~~~~p~ipviSnv~g~~~~~~~~~~~~~~~~~~~~~~~i-~~~l~~ql~~PV~w~~~i~~l~~-~   78 (116)
                      |+++.+.|+..++.+.+.+|++|++||++|+++.               +.+.+ +++|.+|+++||+|.++++.+.+ .
T Consensus       197 ~~~~~~~~~~~l~~~~~~~~~~pv~S~~~g~~~~---------------~~~~~~~~~l~~~l~~pV~~~~~i~~l~~~~  261 (298)
T smart00827      197 MDPILDEFREALAGITPRPPRIPFVSTVTGELID---------------GAELDDAEYWVRNLREPVRFADAVRALLAEQ  261 (298)
T ss_pred             HHHHHHHHHHHHhhCCCCCCCCcEEeCCCCcccC---------------CCCCCCHHHHHHHhhccEeHHHHHHHHHHcC
Confidence            6788899999999999999999999999999997               44444 89999999999999999999996 4


Q ss_pred             CCCCccCcEEEeCCCHHHHHHHHHHhhhcC
Q psy13429         79 PQGNHFPRTFECGPGKSLVTILNQVNKKAG  108 (116)
Q Consensus        79 ~~g~~f~~~iEiGPg~~L~~l~k~~~~~~~  108 (116)
                        |+  +.|||+|||++|+++++++.++.+
T Consensus       262 --g~--~~~ie~Gp~~~l~~~~~~~~~~~~  287 (298)
T smart00827      262 --GV--TVFLEVGPHPVLTGPIKQTLPAAG  287 (298)
T ss_pred             --CC--cEEEEeCCcHHHHHHHHHHHhccC
Confidence              77  556999999999999999987654

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=99.67  E-value=1.5e-16  Score=151.83  Aligned_cols=90  Identities=28%  Similarity=0.475  Sum_probs=82.4

Q ss_pred             CccchHHHHHHHhcCCCCCCCccEEeCCCCccccccccchhhhcccccCCHHHHHhHHHHhhcCCcCHHHHHHHHHhCCC
Q psy13429          1 MVPAVEPFALALKKATINDMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDANHIRRQLPKQIYKPVCWEQTLHILYERPQ   80 (116)
Q Consensus         1 M~pa~~~~~~~l~~~~~~~p~ipviSnv~g~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ql~~PV~w~~~i~~l~~~~~   80 (116)
                      |+++.++|+++|+.++|+.|.+|+|||++|+++..              +.+.+++||.+|+++||+|.++|++|++.  
T Consensus       795 m~~a~~~f~~~L~~i~~~~P~ipv~SnvtG~~~~~--------------~~~~i~~~~~~ql~~PV~F~~aIe~l~~~--  858 (2582)
T TIGR02813       795 VAHAQKPFSAAIDKAKFNTPLVPLYSNGTGKLHSN--------------DAAAIKKALKNHMLQSVHFSEQLEAMYAA--  858 (2582)
T ss_pred             HHHHHHHHHHHHhhCCCCCCCceEEECCCCeEecC--------------chhhHHHHHHHHhhCeecHHHHHHHHHHC--
Confidence            78999999999999999999999999999999863              56778999999999999999999999987  


Q ss_pred             CCccCcEEEeCCCHHHHHHHHHHhhhcC
Q psy13429         81 GNHFPRTFECGPGKSLVTILNQVNKKAG  108 (116)
Q Consensus        81 g~~f~~~iEiGPg~~L~~l~k~~~~~~~  108 (116)
                      |.  +.|||+|||++|++++++++++..
T Consensus       859 G~--~~FVEiGPg~vLt~lv~~il~~~~  884 (2582)
T TIGR02813       859 GA--RVFVEFGPKNILQKLVENTLKDKE  884 (2582)
T ss_pred             CC--CEEEEcCCcHHHHHHHHHHhhccC
Confidence            88  455999999999999999987643

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>TIGR02816 pfaB_fam PfaB family protein

Probab=99.57  E-value=7.6e-15  Score=124.50  Aligned_cols=75  Identities=20%  Similarity=0.272  Sum_probs=60.9

Q ss_pred             CCCccEEeCCC--CccccccccchhhhcccccCCHHHHHhHHHHhhcCCcCHHHHHHHHHhCCCCCccCcEEEeCCCHHH
Q psy13429         19 DMIIPVHSNVD--GKIYRGENKEVSLSVSSLFRDANHIRRQLPKQIYKPVCWEQTLHILYERPQGNHFPRTFECGPGKSL   96 (116)
Q Consensus        19 ~p~ipviSnv~--g~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ql~~PV~w~~~i~~l~~~~~g~~f~~~iEiGPg~~L   96 (116)
                      +|++|++||++  |.....          ....+++.+++||.+|+++||+|.++++.|++.  |+  +.|||+|||++|
T Consensus       414 ~p~ip~iSnvt~tG~~~~~----------~~~~d~~~ia~yw~~ql~~PVrF~~~I~~L~~~--Gv--~~FVEIGPg~vL  479 (538)
T TIGR02816       414 PMDIKFISAADLLAKNQNS----------EQAIDSQSIANSIADTFCQTLDFTALIHHAQEQ--GA--KLFVEIGADRQN  479 (538)
T ss_pred             ccCCeeeecccccCcccCC----------CcCCCHHHHHHHHHHcCCCccCHHHHHHHHHHC--CC--CEEEEeCCChHH
Confidence            68999999994  653210          000166788999999999999999999999998  88  555999999999


Q ss_pred             HHHHHHHhhhc
Q psy13429         97 VTILNQVNKKA  107 (116)
Q Consensus        97 ~~l~k~~~~~~  107 (116)
                      +++++++.++.
T Consensus       480 s~lv~~~l~~~  490 (538)
T TIGR02816       480 CTLIDKINKQD  490 (538)
T ss_pred             HHHHHHHhhcc
Confidence            99999998754

The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.

>COG3321 Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.10  E-value=1.6e-10  Score=104.53  Aligned_cols=88  Identities=25%  Similarity=0.372  Sum_probs=77.5

Q ss_pred             CccchHHHHHHHhcCCCCCCCccEEeCCCCccccccccchhhhcccccCCHHHHHhHHHHhhcCCcCHHHHHHHHHhCCC
Q psy13429          1 MVPAVEPFALALKKATINDMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDANHIRRQLPKQIYKPVCWEQTLHILYERPQ   80 (116)
Q Consensus         1 M~pa~~~~~~~l~~~~~~~p~ipviSnv~g~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ql~~PV~w~~~i~~l~~~~~   80 (116)
                      |+|+.++|...+..+..+.|.+|++||++|.+..               ..-...+||.+|++.||+|.++++.+...  
T Consensus       726 m~~~~~~~~~~la~i~~~~p~~p~~S~~~~~~~~---------------~~~~d~~yw~~~~r~~v~f~~~i~~~~~~--  788 (1061)
T COG3321         726 MDPILDEFAAALADLAPRPPQIPLISNVTGDLAG---------------EPGGDAQYWVQHLRQPVRFADAIAAALAD--  788 (1061)
T ss_pred             HHHHHHHHHHHHhhcccCCCCcceeeeeeccccC---------------CcccCHHHHHHHHHhhccHHHHHHHHHhc--
Confidence            7899999999999999999999999999999843               33333799999999999999999999987  


Q ss_pred             CCccCcEEEeCCCHHHHHHHHHHhhhc
Q psy13429         81 GNHFPRTFECGPGKSLVTILNQVNKKA  107 (116)
Q Consensus        81 g~~f~~~iEiGPg~~L~~l~k~~~~~~  107 (116)
                      |.  ..|+|+|||.+|+..+++...+.
T Consensus       789 ~~--~~f~E~~p~p~l~~~~~~~~~~~  813 (1061)
T COG3321         789 GA--RTFIEVGPGPVLTESIKQTLRDA  813 (1061)
T ss_pred             cc--ceEEEecCCHhHHHHHHHHhhhh
Confidence            65  34499999999999999988764

>KOG1202|consensus

Probab=94.02  E-value=0.084  Score=50.02  Aligned_cols=86  Identities=19%  Similarity=0.150  Sum_probs=58.1

Q ss_pred             CccchHHHHHHHhcCCCCC-C-CccEEeCCCCccccccccchhhhcccccCCHHHH--HhHHHHhhcCCcCHHHHHHHHH
Q psy13429          1 MVPAVEPFALALKKATIND-M-IIPVHSNVDGKIYRGENKEVSLSVSSLFRDANHI--RRQLPKQIYKPVCWEQTLHILY   76 (116)
Q Consensus         1 M~pa~~~~~~~l~~~~~~~-p-~ipviSnv~g~~~~~~~~~~~~~~~~~~~~~~~i--~~~l~~ql~~PV~w~~~i~~l~   76 (116)
                      |+.++.++++.|+++-.++ | ....+|+.--             -++|.-+.+..  .+|-+.++++||.|.++++.+=
T Consensus       696 m~a~~p~l~~~l~k~i~epK~rsarWlSTSip-------------Ea~W~s~la~tsSA~Y~vnNl~SPVLF~eAlq~vP  762 (2376)
T KOG1202|consen  696 MEAAAPPLRQSLEKVIPEPKPRSARWLSTSIP-------------EAQWHSSLARTSSAEYHVNNLVSPVLFHEALQHVP  762 (2376)
T ss_pred             HHhhChHHHHHHHHhcCCCCCcccchhhccCC-------------hhhhcChhhhhcchhhhhhccccHHHHHHHHHhCc
Confidence            5677888888888764332 2 2234443211             12232233332  6899999999999999998875


Q ss_pred             hCCCCCccCcEEEeCCCHHHHHHHHHHhh
Q psy13429         77 ERPQGNHFPRTFECGPGKSLVTILNQVNK  105 (116)
Q Consensus        77 ~~~~g~~f~~~iEiGPg~~L~~l~k~~~~  105 (116)
                      ++      ..++||.|+.-|..++|+.++
T Consensus       763 ~n------Av~vEiAPH~LlqAiLkRsL~  785 (2376)
T KOG1202|consen  763 EN------AVVVEIAPHGLLQAILKRSLK  785 (2376)
T ss_pred             cc------ceEEEecchHHHHHHHHhhcC
Confidence            53      334999999999999998764

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	116
2c2n_A	339	Structure Of Human Mitochondrial Malonyltransferase		3e-18
1mla_A	309	The Escherichia Coli Malonyl-Coa:acyl Carrier Prote		2e-05
2g1h_A	308	Structure Of E.Coli Fabd Complexed With Glycerol Le		2e-05
3k89_A	314	Structure Of X. Oryzae Pv. Oryzae Kacc10331, Xoo088		3e-05
3h0p_A	312	2.0 Angstrom Crystal Structure Of An Acyl Carrier P		7e-05

>pdb|2C2N|A Chain A, Structure Of Human Mitochondrial Malonyltransferase Length = 339

Iteration: 1
 Score = 86.7 bits (213), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 47/114 (41%), Positives = 60/114 (52%), Gaps = 15/114 (13%)
Query: 1   MVPAVEPFALALKKATINDMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDANHIRRQLPK 60
           M PAVEP   ALK   I   ++ V+SNV G  YR                  HI + L +
Sbjct: 238 MEPAVEPLTQALKAVDIKKPLVSVYSNVHGHRYR---------------HPGHIHKLLAQ 282
Query: 61  QIYKPVCWEQTLHILYERPQGNHFPRTFECGPGKSLVTILNQVNKKAGDSAAKV 114
           Q+  PV WEQT+H +YER +G  FP+TFE GPG+ L  IL   N +A  S + V
Sbjct: 283 QLVSPVKWEQTMHAIYERKKGRGFPQTFEVGPGRQLGAILKSCNMQAWKSYSAV 336

>pdb|1MLA|A Chain A, The Escherichia Coli Malonyl-Coa:acyl Carrier Protein Transacylase At 1.5-Angstroms Resolution. Crystal Structure Of A Fatty Acid Synthase Component Length = 309

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 49/115 (42%), Gaps = 19/115 (16%)
Query: 1   MVPAVEPFALALKKATINDMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDANHIRRQLPK 60
           M PA +  A+ L K T N   +PV +NVD K                  + + IR  L +
Sbjct: 205 MKPAADKLAVELAKITFNAPTVPVVNNVDVKCE---------------TNGDAIRDALVR 249
Query: 61  QIYKPVCWEQTLHILYERPQGNHFPRTFECGPGKSLVTILNQVNKKAGDSAAKVP 115
           Q+Y PV W +++   Y   QG      +E GPGK L  +  ++      SA   P
Sbjct: 250 QLYNPVQWTKSVE--YMAAQG--VEHLYEVGPGKVLTGLTKRIVDTLTASALNEP 300

>pdb|2G1H|A Chain A, Structure Of E.Coli Fabd Complexed With Glycerol Length = 308

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 49/115 (42%), Gaps = 19/115 (16%)
Query: 1   MVPAVEPFALALKKATINDMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDANHIRRQLPK 60
           M PA +  A+ L K T N   +PV +NVD K                  + + IR  L +
Sbjct: 204 MKPAADKLAVELAKITFNAPTVPVVNNVDVKCE---------------TNGDAIRDALVR 248
Query: 61  QIYKPVCWEQTLHILYERPQGNHFPRTFECGPGKSLVTILNQVNKKAGDSAAKVP 115
           Q+Y PV W +++   Y   QG      +E GPGK L  +  ++      SA   P
Sbjct: 249 QLYNPVQWTKSVE--YMAAQG--VEHLYEVGPGKVLTGLTKRIVDTLTASALNEP 299

>pdb|3K89|A Chain A, Structure Of X. Oryzae Pv. Oryzae Kacc10331, Xoo0880(Fabd) Complexed With Glycerol Length = 314

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 39/85 (45%), Gaps = 19/85 (22%)
Query: 22  IPVHSNVDGKIYRGENKEVSLSVSSLFRDANHIRRQLPKQIYKPVCWEQTLHILYERPQG 81
           IPV  NVD +++ G                  IR+ L +Q+Y PV W   +  L    QG
Sbjct: 228 IPVVQNVDARVHDGSAA---------------IRQALVEQLYLPVQWTGCVQALAS--QG 270
Query: 82  NHFPRTFECGPGKSLVTILNQVNKK 106
               R  ECGPGK L  ++ +++K 
Sbjct: 271 --ITRIAECGPGKVLSGLIKRIDKS 293

>pdb|3H0P|A Chain A, 2.0 Angstrom Crystal Structure Of An Acyl Carrier Protein S- Malonyltransferase From Salmonella Typhimurium. Length = 312

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 33/114 (28%), Positives = 48/114 (42%), Gaps = 19/114 (16%)
Query: 3   PAVEPFALALKKATINDMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDANHIRRQLPKQI 62
           PA +  A+ L K T +   +PV +NVD K                  DA  IR  L +Q+
Sbjct: 210 PAADKLAVELAKITFSAPTVPVVNNVDVKCE---------------TDAAAIRDALVRQL 254
Query: 63  YKPVCWEQTLHILYERPQGNHFPRTFECGPGKSLVTILNQVNKKAGDSAAKVPC 116
           Y PV W +++  +    QG      +E GPGK L  +  ++      SA   P 
Sbjct: 255 YNPVQWTKSVEFI--AAQG--VEHLYEVGPGKVLTGLTKRIVDTLTASALNEPA 304

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	116
2c2n_A	339	Malonyl COA-acyl carrier protein transacylase; fat	5e-30
3sbm_A	281	DISD protein, DSZD; transferase; HET: P6G; 1.35A {	3e-17
3im8_A	307	Malonyl acyl carrier protein transacylase; fatty a	3e-17
3tqe_A	316	Malonyl-COA-[acyl-carrier-protein] transacylase; f	4e-17
1mla_A	309	Malonyl-coenzyme A acyl carrier protein transacyla	5e-17
3k89_A	314	Malonyl COA-ACP transacylase; bacterial blight, XO	5e-17
3ptw_A	336	Malonyl COA-acyl carrier protein transacylase; str	8e-17
3ezo_A	318	Malonyl COA-acyl carrier protein transacylase; ssg	9e-17
2qc3_A	303	MCT, malonyl COA-acyl carrier protein transacylase	1e-16
2h1y_A	321	Malonyl coenzyme A-acyl carrier protein transacyl;	1e-16
3im9_A	316	MCAT, MCT, malonyl COA-acyl carrier protein transa	1e-16
3g87_A	394	Malonyl COA-acyl carrier protein transacylase; ssg	1e-16
2cuy_A	305	Malonyl COA-[acyl carrier protein] transacylase; t	2e-16
1nm2_A	317	Malonyl COA:acyl carrier protein malonyltransfera;	2e-16
3qat_A	318	Malonyl COA-acyl carrier protein transacylase; sea	4e-16
2uva_G	2060	Fatty acid synthase beta subunits; fungal, dehydra	3e-07
2uv8_G	2051	Fatty acid synthase subunit beta (FAS1); fatty aci	4e-07

>2c2n_A Malonyl COA-acyl carrier protein transacylase; fatty acid synthase, lipid synthesis, mitochondrion transfer transferase; HET: AE4; 1.55A {Homo sapiens} Length = 339

 Score =  108 bits (272), Expect = 5e-30
 Identities = 47/114 (41%), Positives = 60/114 (52%), Gaps = 15/114 (13%)

Query: 1   MVPAVEPFALALKKATINDMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDANHIRRQLPK 60
           M PAVEP   ALK   I   ++ V+SNV G  YR                  HI + L +
Sbjct: 238 MEPAVEPLTQALKAVDIKKPLVSVYSNVHGHRYR---------------HPGHIHKLLAQ 282

Query: 61  QIYKPVCWEQTLHILYERPQGNHFPRTFECGPGKSLVTILNQVNKKAGDSAAKV 114
           Q+  PV WEQT+H +YER +G  FP+TFE GPG+ L  IL   N +A  S + V
Sbjct: 283 QLVSPVKWEQTMHAIYERKKGRGFPQTFEVGPGRQLGAILKSCNMQAWKSYSAV 336

>3sbm_A DISD protein, DSZD; transferase; HET: P6G; 1.35A {Sorangium cellulosum} PDB: 3rgi_A Length = 281

 Score = 73.7 bits (182), Expect = 3e-17
 Identities = 30/108 (27%), Positives = 42/108 (38%), Gaps = 22/108 (20%)

Query: 1   MVPAVEPFALALKKATINDMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDANHIRRQLPK 60
           M PA+  F   L+        IPV SNV  +                   A+ IR  L +
Sbjct: 195 MRPAMVEFGRFLEGYDFAPPKIPVISNVTARPC----------------KADGIRAALSE 238

Query: 61  QIYKPVCWEQTLHILYERPQG-NHFPRTFECGPGKSLVTILNQVNKKA 107
           QI  PV W +++  L    +G   F    ECG G  L  +  Q+ + A
Sbjct: 239 QIASPVRWCESIRYLMG--RGVEEF---VECGHGIVLTGLYAQIRRDA 281

>3im8_A Malonyl acyl carrier protein transacylase; fatty acid synthesis, malonyl-COA, acyl carrier protein TRAN (MCAT), FABD, acyltransferase; 2.10A {Streptococcus pneumoniae} Length = 307

 Score = 74.1 bits (183), Expect = 3e-17
 Identities = 21/97 (21%), Positives = 41/97 (42%), Gaps = 22/97 (22%)

Query: 1   MVPAVEPFALALKKATINDMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDANHIRRQLPK 60
           + PA +  A  L + + +D   P+  N +  +                     I + L +
Sbjct: 203 LEPASQKLAETLAQVSFSDFTCPLVGNTEAAVM----------------QKEDIAQLLTR 246

Query: 61  QIYKPVCWEQTLHILYERPQG-NHFPRTFECGPGKSL 96
           Q+ +PV + +++ ++ E   G ++F    E GPGK L
Sbjct: 247 QVKEPVRFYESIGVMQE--AGISNF---IEIGPGKVL 278

>3tqe_A Malonyl-COA-[acyl-carrier-protein] transacylase; fatty acid/phospholipid metabolism, transferase; HET: MSE; 1.50A {Coxiella burnetii} Length = 316

 Score = 73.7 bits (182), Expect = 4e-17
 Identities = 31/97 (31%), Positives = 43/97 (44%), Gaps = 21/97 (21%)

Query: 1   MVPAVEPFALALKKATINDMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDANHIRRQLPK 60
           M PA +  A  + K +I+   +PV  NVD   +                +AN IR  L K
Sbjct: 209 MQPAADRLAQDIAKISIDSPKVPVIHNVDVVDH---------------NEANIIRGALIK 253

Query: 61  QIYKPVCWEQTLHILYERPQG-NHFPRTFECGPGKSL 96
           Q+ +PV W +T+  + E  QG   F    ECGP   L
Sbjct: 254 QLVRPVRWVETIKYIEE--QGIKVF---MECGPDNKL 285

>1mla_A Malonyl-coenzyme A acyl carrier protein transacylase; acyltransferase; 1.50A {Escherichia coli} SCOP: c.19.1.1 d.58.23.1 PDB: 2g2o_A 2g1h_A 2g2y_A 2g2z_A* 3h0p_A 3hjv_A* Length = 309

 Score = 73.3 bits (181), Expect = 5e-17
 Identities = 31/97 (31%), Positives = 44/97 (45%), Gaps = 21/97 (21%)

Query: 1   MVPAVEPFALALKKATINDMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDANHIRRQLPK 60
           M PA +  A+ L K T N   +PV +NVD K                  + + IR  L +
Sbjct: 205 MKPAADKLAVELAKITFNAPTVPVVNNVDVKCE---------------TNGDAIRDALVR 249

Query: 61  QIYKPVCWEQTLHILYERPQG-NHFPRTFECGPGKSL 96
           Q+Y PV W +++  +    QG  H    +E GPGK L
Sbjct: 250 QLYNPVQWTKSVEYMAA--QGVEHL---YEVGPGKVL 281

>3k89_A Malonyl COA-ACP transacylase; bacterial blight, XOO0880, FABD, xanthomonas oryzae PV. ORYZ KACC10331, transferase; 1.60A {Xanthomonas oryzae PV} PDB: 3een_A 3r97_A* Length = 314

 Score = 73.3 bits (181), Expect = 5e-17
 Identities = 27/97 (27%), Positives = 38/97 (39%), Gaps = 21/97 (21%)

Query: 1   MVPAVEPFALALKKATINDMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDANHIRRQLPK 60
           M  A      A+   + +   IPV  NVD +++                 +  IR+ L +
Sbjct: 207 MRDAANQLGEAMAGLSWHAPQIPVVQNVDARVH---------------DGSAAIRQALVE 251

Query: 61  QIYKPVCWEQTLHILYERPQG-NHFPRTFECGPGKSL 96
           Q+Y PV W   +  L    QG        ECGPGK L
Sbjct: 252 QLYLPVQWTGCVQALAS--QGITRI---AECGPGKVL 283

>3ptw_A Malonyl COA-acyl carrier protein transacylase; structural genomics, protein structure initiative; 2.10A {Clostridium perfringens} Length = 336

 Score = 73.0 bits (180), Expect = 8e-17
 Identities = 28/97 (28%), Positives = 41/97 (42%), Gaps = 21/97 (21%)

Query: 1   MVPAVEPFALALKKATINDMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDANHIRRQLPK 60
           + PA E     L K +IN +   V SNV G+ Y                + ++I   L  
Sbjct: 203 LQPAAEKLEDELNKISINKLNGIVMSNVKGEAY---------------LEDDNIIELLTS 247

Query: 61  QIYKPVCWEQTLHILYERPQG-NHFPRTFECGPGKSL 96
           Q+ KPV +   +  + E   G + F    E GPGK+L
Sbjct: 248 QVKKPVLFINDIEKMIE--SGVDTF---IEIGPGKAL 279

>3ezo_A Malonyl COA-acyl carrier protein transacylase; ssgcid, acyl-carrier-protein S-malonyltransferase, acyltransferase, transferase; 2.05A {Burkholderia pseudomallei 1710B} Length = 318

 Score = 72.9 bits (180), Expect = 9e-17
 Identities = 23/97 (23%), Positives = 35/97 (36%), Gaps = 21/97 (21%)

Query: 1   MVPAVEPFALALKKATINDMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDANHIRRQLPK 60
           + PA +     L    +    I V +N+D  +                 D   I+  L +
Sbjct: 211 LKPASDKLREYLAGVDVKAPKISVVNNIDVAVV---------------SDPAAIKDALVR 255

Query: 61  QIYKPVCWEQTLHILYERPQG-NHFPRTFECGPGKSL 96
           Q   PV W + +  +    +G  H     ECGPGK L
Sbjct: 256 QAAGPVRWVECVQHIAR--EGVTHV---IECGPGKVL 287

>2qc3_A MCT, malonyl COA-acyl carrier protein transacylase; malonyl-COA:ACP transacylase, , nucleophili fatty acids biosynthesis; 2.30A {Mycobacterium tuberculosis} PDB: 2qj3_A Length = 303

 Score = 72.6 bits (179), Expect = 1e-16
 Identities = 27/116 (23%), Positives = 36/116 (31%), Gaps = 21/116 (18%)

Query: 1   MVPAVEPFALALKKATINDMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDANHIRRQLPK 60
           M PA++ FA A       D    + SN DGK                   A      L  
Sbjct: 199 MAPALDGFAAAAANIATADPTATLLSNRDGKPV---------------TSAAAAMDTLVS 243

Query: 61  QIYKPVCWEQTLHILYERPQG-NHFPRTFECGPGKSLVTILNQVNKKAGDSAAKVP 115
           Q+ +PV W+     L E            E  P  +L  I  +  +     A K P
Sbjct: 244 QLTQPVRWDLCTATLRE--HTVTAI---VEFPPAGTLSGIAKRELRGVPARAVKSP 294

>2h1y_A Malonyl coenzyme A-acyl carrier protein transacyl; FABD, MCAT, transferase; 2.50A {Helicobacter pylori} Length = 321

 Score = 72.6 bits (179), Expect = 1e-16
 Identities = 17/97 (17%), Positives = 31/97 (31%), Gaps = 22/97 (22%)

Query: 1   MVPAVEPFALALKKATINDMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDANHIRRQLPK 60
           + P +  F   L+K+  +     + SN   + Y                +       L  
Sbjct: 214 LEPMIFKFQELLEKSLKDKFHFEIISNATNEAY---------------HNKAKAVELLSL 258

Query: 61  QIYKPVCWEQTLHILYERPQG-NHFPRTFECGPGKSL 96
           Q+ +PV ++  +          + F   FE G G  L
Sbjct: 259 QLTQPVRYQDCVKSN---NDRVDIF---FELGCGSVL 289

>3im9_A MCAT, MCT, malonyl COA-acyl carrier protein transacylase; fatty acid synthesis, malonyl-COA: acyl carrier protein TRAN (MCAT), FABD; 1.46A {Staphylococcus aureus} Length = 316

 Score = 72.6 bits (179), Expect = 1e-16
 Identities = 26/97 (26%), Positives = 38/97 (39%), Gaps = 21/97 (21%)

Query: 1   MVPAVEPFALALKKATINDMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDANHIRRQLPK 60
           M    E F+  + +    D   PV  NV+ +                  D   I+  + K
Sbjct: 211 MKVIEEDFSSYINQFEWRDAKFPVVQNVNAQGE---------------TDKEVIKSNMVK 255

Query: 61  QIYKPVCWEQTLHILYERPQG-NHFPRTFECGPGKSL 96
           Q+Y PV +  +   L +  QG +HF    E GPGK L
Sbjct: 256 QLYSPVQFINSTEWLID--QGVDHF---IEIGPGKVL 287

>3g87_A Malonyl COA-acyl carrier protein transacylase; ssgcid, niaid, decode biostructures, dried seaweed, acyltran transferase; 2.30A {Burkholderia pseudomallei} Length = 394

 Score = 72.7 bits (179), Expect = 1e-16
 Identities = 26/108 (24%), Positives = 41/108 (37%), Gaps = 17/108 (15%)

Query: 1   MVPAVEPFALALKKATINDMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDANHIRRQLPK 60
           M PA + FA  L+   + D  IPV SNV  + Y                    +   L +
Sbjct: 200 MRPAQQAFAAHLQSFRLADPAIPVISNVSARPYENGR----------------VSEGLAQ 243

Query: 61  QIYKPVCWEQTLHILYERPQGNHFPRTF-ECGPGKSLVTILNQVNKKA 107
           QI  PV W +++  L            F E G G  L  +++ + ++ 
Sbjct: 244 QIASPVRWCESIRYLLALAAERGEAIEFTELGHGDVLTRLVHTIRRQT 291

>2cuy_A Malonyl COA-[acyl carrier protein] transacylase; transferase, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} Length = 305

 Score = 72.1 bits (178), Expect = 2e-16
 Identities = 26/97 (26%), Positives = 36/97 (37%), Gaps = 21/97 (21%)

Query: 1   MVPAVEPFALALKKATINDMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDANHIRRQLPK 60
           M PA +  A  L +  +     PV+SNV  +                  D   IR  L +
Sbjct: 198 MAPARKRLAEDLAQVPLRRPRFPVYSNVTARPE---------------EDPERIRALLLE 242

Query: 61  QIYKPVCWEQTLHILYERPQG-NHFPRTFECGPGKSL 96
           QI  PV W + L  +    +G   F    E G G+ L
Sbjct: 243 QITAPVRWVEILRDMEA--RGVKRF---LEFGSGEVL 274

>1nm2_A Malonyl COA:acyl carrier protein malonyltransfera; alpha/beta hydrolase-like core; 2.00A {Streptomyces coelicolor} SCOP: c.19.1.1 d.58.23.1 PDB: 2cdh_4 2cf2_B Length = 317

 Score = 72.2 bits (178), Expect = 2e-16
 Identities = 24/97 (24%), Positives = 33/97 (34%), Gaps = 21/97 (21%)

Query: 1   MVPAVEPFALALKKATINDMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDANHIRRQLPK 60
           M PAV+  A A K  T  D  +   SN DG+                      +  +L  
Sbjct: 206 MAPAVDKLAEAAKALTPADPKVTYVSNKDGRAV---------------ASGTEVLDRLVG 250

Query: 61  QIYKPVCWEQTLHILYERPQG-NHFPRTFECGPGKSL 96
           Q+  PV W+  +    E   G        E  PG +L
Sbjct: 251 QVANPVRWDLCMETFKE--LGVTAI---IEVCPGGTL 282

>3qat_A Malonyl COA-acyl carrier protein transacylase; seattle structural genomics center for infectious disease, S bartonella, CAT-scratch disease; 1.60A {Bartonella henselae} Length = 318

 Score = 71.0 bits (175), Expect = 4e-16
 Identities = 24/97 (24%), Positives = 32/97 (32%), Gaps = 21/97 (21%)

Query: 1   MVPAVEPFALALKKATINDMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDANHIRRQLPK 60
           M PA      AL        I+P+ +NV                     D   I   L +
Sbjct: 211 MQPAANAMKNALLTVNKTAPIVPLIANVSVIPE---------------SDPERIVSLLVQ 255

Query: 61  QIYKPVCWEQTLHILYERPQG-NHFPRTFECGPGKSL 96
           Q+   V W +T+  +     G N     FE G GK L
Sbjct: 256 QVTGRVRWRETIEWISA--NGVNTL---FEIGSGKVL 287

>2uva_G Fatty acid synthase beta subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; HET: FMN; 3.10A {Thermomyces lanuginosus} PDB: 2uvc_G* Length = 2060

 Score = 46.6 bits (110), Expect = 3e-07
 Identities = 19/96 (19%), Positives = 28/96 (29%), Gaps = 21/96 (21%)

Query: 1   MVPAVEPFALALKKATIN--DMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDANHIRRQL 58
           +  A       +    I    ++IPV+    G+  R               D + I   +
Sbjct: 426 LAGAHAHILGDVDDMKIPASSLVIPVYDTKTGQDLRELG------------DEDIIPELV 473

Query: 59  PKQIYKPVCWEQTLHILYERPQGNHFPRTFECGPGK 94
               Y PV WE         P   H     + GPG 
Sbjct: 474 RMITYDPVNWETATV----FPDATHI---VDFGPGG 502

>2uv8_G Fatty acid synthase subunit beta (FAS1); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_G* 3hmj_G* Length = 2051

 Score = 46.2 bits (109), Expect = 4e-07
 Identities = 23/99 (23%), Positives = 34/99 (34%), Gaps = 27/99 (27%)

Query: 1   MVPAVEPFALALKKATI----NDMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDANHIRR 56
           +VPA +     L K  +     D+ IPV+   DG   R  +                I  
Sbjct: 432 LVPASDLINKDLVKNNVSFNAKDIQIPVYDTFDGSDLRVLSGS--------------ISE 477

Query: 57  QLPKQIY-KPVCWEQTLHILYERPQGNHFPRTFECGPGK 94
           ++   I   PV WE T      + +  H     + GPG 
Sbjct: 478 RIVDCIIRLPVKWETTT-----QFKATHI---LDFGPGG 508

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	116
3sbm_A	281	DISD protein, DSZD; transferase; HET: P6G; 1.35A {	99.86
2c2n_A	339	Malonyl COA-acyl carrier protein transacylase; fat	99.85
3k89_A	314	Malonyl COA-ACP transacylase; bacterial blight, XO	99.85
3ezo_A	318	Malonyl COA-acyl carrier protein transacylase; ssg	99.85
3im9_A	316	MCAT, MCT, malonyl COA-acyl carrier protein transa	99.84
3qat_A	318	Malonyl COA-acyl carrier protein transacylase; sea	99.84
3tqe_A	316	Malonyl-COA-[acyl-carrier-protein] transacylase; f	99.84
2cuy_A	305	Malonyl COA-[acyl carrier protein] transacylase; t	99.84
2qc3_A	303	MCT, malonyl COA-acyl carrier protein transacylase	99.84
3ptw_A	336	Malonyl COA-acyl carrier protein transacylase; str	99.83
1nm2_A	317	Malonyl COA:acyl carrier protein malonyltransfera;	99.83
1mla_A	309	Malonyl-coenzyme A acyl carrier protein transacyla	99.83
3im8_A	307	Malonyl acyl carrier protein transacylase; fatty a	99.83
2h1y_A	321	Malonyl coenzyme A-acyl carrier protein transacyl;	99.81
3tzy_A	491	Polyketide synthase PKS13; acyltransferase, long f	99.77
3g87_A	394	Malonyl COA-acyl carrier protein transacylase; ssg	99.77
4amm_A	401	DYNE8; transferase; 1.40A {Micromonospora chersina	99.7
2qo3_A	915	Eryaii erythromycin polyketide synthase modules 3;	99.68
2hg4_A	917	DEBS, 6-deoxyerythronolide B synthase; ketosynthas	99.67
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	99.48
2uv8_G	2051	Fatty acid synthase subunit beta (FAS1); fatty aci	99.42
3hhd_A	965	Fatty acid synthase; transferase, multienzyme, meg	99.29
2uva_G	2060	Fatty acid synthase beta subunits; fungal, dehydra	99.27
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.11
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	99.03
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	98.86
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	97.71
2uva_G	2060	Fatty acid synthase beta subunits; fungal, dehydra	97.42
2uv8_G	2051	Fatty acid synthase subunit beta (FAS1); fatty aci	97.31

>3sbm_A DISD protein, DSZD; transferase; HET: P6G; 1.35A {Sorangium cellulosum} PDB: 3rgi_A

Probab=99.86  E-value=8.7e-22  Score=151.89  Aligned_cols=87  Identities=33%  Similarity=0.508  Sum_probs=80.3

Q ss_pred             CccchHHHHHHHhcCCCCCCCccEEeCCCCccccccccchhhhcccccCCHHHHHhHHHHhhcCCcCHHHHHHHHHhCCC
Q psy13429          1 MVPAVEPFALALKKATINDMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDANHIRRQLPKQIYKPVCWEQTLHILYERPQ   80 (116)
Q Consensus         1 M~pa~~~~~~~l~~~~~~~p~ipviSnv~g~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ql~~PV~w~~~i~~l~~~~~   80 (116)
                      |+|+.++|++.++++++++|++|++||++|+++.               + +.+++||.+|+++||+|.++++.|.+.  
T Consensus       195 m~~~~~~~~~~l~~~~~~~p~ip~~S~vtg~~~~---------------~-~~~~~~~~~~l~~pV~f~~~i~~l~~~--  256 (281)
T 3sbm_A          195 MRPAMVEFGRFLEGYDFAPPKIPVISNVTARPCK---------------A-DGIRAALSEQIASPVRWCESIRYLMGR--  256 (281)
T ss_dssp             GHHHHHHHHHHHTTCCCCCCSSCEECTTTSSBCC---------------G-GGHHHHHHHGGGSCEEHHHHHHHHHHT--
T ss_pred             HHHHHHHHHHHHhcCCCCCCCCeEEECCCCCCCC---------------h-HHHHHHHHHHccccEeHHHHHHHHHhC--
Confidence            7899999999999999999999999999999986               3 567899999999999999999999998  


Q ss_pred             CCccCcEEEeCCCHHHHHHHHHHhhhc
Q psy13429         81 GNHFPRTFECGPGKSLVTILNQVNKKA  107 (116)
Q Consensus        81 g~~f~~~iEiGPg~~L~~l~k~~~~~~  107 (116)
                      |+  +.|||+|||++|+++++++.+++
T Consensus       257 g~--~~fvEiGP~~~L~~~~~~i~~~a  281 (281)
T 3sbm_A          257 GV--EEFVECGHGIVLTGLYAQIRRDA  281 (281)
T ss_dssp             TC--CEEEECSSSSHHHHHHHHHHHHC
T ss_pred             CC--CEEEEeCCcHHHHHHHHHhcCCC
Confidence            88  55699999999999999998763

>2c2n_A Malonyl COA-acyl carrier protein transacylase; fatty acid synthase, lipid synthesis, mitochondrion transfer transferase; HET: AE4; 1.55A {Homo sapiens}

Probab=99.85  E-value=9.4e-22  Score=155.80  Aligned_cols=101  Identities=47%  Similarity=0.765  Sum_probs=89.2

Q ss_pred             CccchHHHHHHHhcCCCCCCCccEEeCCCCccccccccchhhhcccccCCHHHHHhHHHHhhcCCcCHHHHHHHHHhCCC
Q psy13429          1 MVPAVEPFALALKKATINDMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDANHIRRQLPKQIYKPVCWEQTLHILYERPQ   80 (116)
Q Consensus         1 M~pa~~~~~~~l~~~~~~~p~ipviSnv~g~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ql~~PV~w~~~i~~l~~~~~   80 (116)
                      |+|+.++|++.++++++++|++|++||+||+++.               +.+.+++||.+|+++||+|.++++.|.+...
T Consensus       238 m~~~~~~~~~~l~~~~~~~p~ip~~S~vtg~~~~---------------~~~~~~~y~~~~l~~pV~f~~av~~l~~~g~  302 (339)
T 2c2n_A          238 MEPAVEPLTQALKAVDIKKPLVSVYSNVHGHRYR---------------HPGHIHKLLAQQLVSPVKWEQTMHAIYERKK  302 (339)
T ss_dssp             GGGGHHHHHHHHHTCCCCCCSSEEECTTTSSBCC---------------CGGGHHHHHHHHTTSCEEHHHHHHHHTCCCT
T ss_pred             HHHHHHHHHHHHhcCCCCCCCceEEECCCCCCCC---------------ChhhHHHHHHHHhhcceeHHHHHHHHHhcCC
Confidence            8999999999999999999999999999999998               6677899999999999999999999988622


Q ss_pred             CCccCcEEEeCCCHHHHHHHHHHhhhcCCCcccCCC
Q psy13429         81 GNHFPRTFECGPGKSLVTILNQVNKKAGDSAAKVPC  116 (116)
Q Consensus        81 g~~f~~~iEiGPg~~L~~l~k~~~~~~~~~~~~~~~  116 (116)
                      |..++.|||+|||++|+++++++.++.......|+|
T Consensus       303 ~~~~~~~vEiGP~~~L~~l~~~~~~~~~~~~~~~~~  338 (339)
T 2c2n_A          303 GRGFPQTFEVGPGRQLGAILKSCNMQAWKSYSAVDV  338 (339)
T ss_dssp             TCCCCEEEEESSSSHHHHHHHHHCHHHHTTEEEECC
T ss_pred             CCCCCEEEEECCcHHHHHHHHHhhhcccccceeeee
Confidence            212255699999999999999998888777777776

>3k89_A Malonyl COA-ACP transacylase; bacterial blight, XOO0880, FABD, xanthomonas oryzae PV. ORYZ KACC10331, transferase; 1.60A {Xanthomonas oryzae PV} PDB: 3een_A 3r97_A*

Probab=99.85  E-value=1.1e-21  Score=153.78  Aligned_cols=89  Identities=31%  Similarity=0.543  Sum_probs=83.1

Q ss_pred             CccchHHHHHHHhcCCCCCCCccEEeCCCCccccccccchhhhcccccCCHHHHHhHHHHhhcCCcCHHHHHHHHHhCCC
Q psy13429          1 MVPAVEPFALALKKATINDMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDANHIRRQLPKQIYKPVCWEQTLHILYERPQ   80 (116)
Q Consensus         1 M~pa~~~~~~~l~~~~~~~p~ipviSnv~g~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ql~~PV~w~~~i~~l~~~~~   80 (116)
                      |+|+.++|++.++.+++++|++|++||++|+++.               +.+.+++||.+|+++||+|.++++.|.+.  
T Consensus       207 m~~~~~~~~~~l~~~~~~~p~ip~~S~vtg~~~~---------------~~~~~~~~~~~~l~~pV~f~~~i~~l~~~--  269 (314)
T 3k89_A          207 MRDAANQLGEAMAGLSWHAPQIPVVQNVDARVHD---------------GSAAIRQALVEQLYLPVQWTGCVQALASQ--  269 (314)
T ss_dssp             GHHHHHHHHHHHHTSCCCCCSSCBEETTTTEECC---------------SHHHHHHHHHHHHHSCEEHHHHHHHHHHT--
T ss_pred             HHHHHHHHHHHHhcCCCCCCCceEEECCCCCccC---------------ChHHHHHHHHHHhhccEeHHHHHHHHHhC--
Confidence            7899999999999999999999999999999998               77888999999999999999999999998  


Q ss_pred             CCccCcEEEeCCCHHHHHHHHHHhhhcC
Q psy13429         81 GNHFPRTFECGPGKSLVTILNQVNKKAG  108 (116)
Q Consensus        81 g~~f~~~iEiGPg~~L~~l~k~~~~~~~  108 (116)
                      |+  +.|||+|||++|+++++++.++..
T Consensus       270 g~--~~fvEiGP~~~L~~~~~~~~~~~~  295 (314)
T 3k89_A          270 GI--TRIAECGPGKVLSGLIKRIDKSLD  295 (314)
T ss_dssp             TC--CEEEECSSSSHHHHHHHHHCTTSE
T ss_pred             CC--CEEEEeCCcHHHHHHHHHhhccCC
Confidence            88  556999999999999999987643

>3ezo_A Malonyl COA-acyl carrier protein transacylase; ssgcid, acyl-carrier-protein S-malonyltransferase, acyltransferase, transferase; 2.05A {Burkholderia pseudomallei 1710B}

Probab=99.85  E-value=1.7e-21  Score=153.22  Aligned_cols=89  Identities=25%  Similarity=0.437  Sum_probs=83.2

Q ss_pred             CccchHHHHHHHhcCCCCCCCccEEeCCCCccccccccchhhhcccccCCHHHHHhHHHHhhcCCcCHHHHHHHHHhCCC
Q psy13429          1 MVPAVEPFALALKKATINDMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDANHIRRQLPKQIYKPVCWEQTLHILYERPQ   80 (116)
Q Consensus         1 M~pa~~~~~~~l~~~~~~~p~ipviSnv~g~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ql~~PV~w~~~i~~l~~~~~   80 (116)
                      |+|+.++|++.++++.+++|++|++||++|+++.               +.+.+++||.+|+++||+|.++++.|.+.  
T Consensus       211 m~~~~~~~~~~l~~~~~~~p~ipv~S~vtg~~~~---------------~~~~~~~~~~~~l~~pV~f~~~v~~l~~~--  273 (318)
T 3ezo_A          211 LKPASDKLREYLAGVDVKAPKISVVNNIDVAVVS---------------DPAAIKDALVRQAAGPVRWVECVQHIARE--  273 (318)
T ss_dssp             GHHHHHHHHHHHTTSCCCCCSSEEBCTTTCCBCC---------------CHHHHHHHHHHHTTSCBCHHHHHHHHHHT--
T ss_pred             HHHHHHHHHHHHhcCCCCCCCCeEEECCCCcccC---------------ChhHHHHHHHHHhcccEEHHHHHHHHHhC--
Confidence            7899999999999999999999999999999998               78888999999999999999999999997  


Q ss_pred             CCccCcEEEeCCCHHHHHHHHHHhhhcC
Q psy13429         81 GNHFPRTFECGPGKSLVTILNQVNKKAG  108 (116)
Q Consensus        81 g~~f~~~iEiGPg~~L~~l~k~~~~~~~  108 (116)
                      |+  +.|||+|||++|++++|++.++..
T Consensus       274 g~--~~fvEiGP~~~L~~~~~~~~~~~~  299 (318)
T 3ezo_A          274 GV--THVIECGPGKVLAGLTKRIDGNLV  299 (318)
T ss_dssp             TC--CEEEEESSSSHHHHHHHHHCTTSE
T ss_pred             CC--CEEEEeCCcHHHHHHHHHHhCCCc
Confidence            88  566999999999999999987653

>3im9_A MCAT, MCT, malonyl COA-acyl carrier protein transacylase; fatty acid synthesis, malonyl-COA: acyl carrier protein TRAN (MCAT), FABD; 1.46A {Staphylococcus aureus}

Probab=99.84  E-value=1.8e-21  Score=152.51  Aligned_cols=89  Identities=27%  Similarity=0.428  Sum_probs=83.2

Q ss_pred             CccchHHHHHHHhcCCCCCCCccEEeCCCCccccccccchhhhcccccCCHHHHHhHHHHhhcCCcCHHHHHHHHHhCCC
Q psy13429          1 MVPAVEPFALALKKATINDMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDANHIRRQLPKQIYKPVCWEQTLHILYERPQ   80 (116)
Q Consensus         1 M~pa~~~~~~~l~~~~~~~p~ipviSnv~g~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ql~~PV~w~~~i~~l~~~~~   80 (116)
                      |+|+.++|++.++.+.+++|++|++||++|+++.               +.+.+++||.+|+++||+|.++++.|.+.  
T Consensus       211 m~~~~~~~~~~l~~~~~~~p~ip~~S~vtg~~~~---------------~~~~~~~~~~~~l~~pV~f~~~v~~l~~~--  273 (316)
T 3im9_A          211 MKVIEEDFSSYINQFEWRDAKFPVVQNVNAQGET---------------DKEVIKSNMVKQLYSPVQFINSTEWLIDQ--  273 (316)
T ss_dssp             GGGGHHHHHHHHTTSCCCCCSSCEECTTTCSEEC---------------CHHHHHHHHHHHTTSCEEHHHHHHHHHHT--
T ss_pred             HHHHHHHHHHHHhhCCCCCCCceEEEcCCCcccC---------------ChhHHHHHHHHHhhccEeHHHHHHHHHhc--
Confidence            8999999999999999999999999999999998               78888999999999999999999999998  


Q ss_pred             CCccCcEEEeCCCHHHHHHHHHHhhhcC
Q psy13429         81 GNHFPRTFECGPGKSLVTILNQVNKKAG  108 (116)
Q Consensus        81 g~~f~~~iEiGPg~~L~~l~k~~~~~~~  108 (116)
                      |+  +.|||+|||++|+++++++.++..
T Consensus       274 g~--~~~vEiGP~~~L~~~~~~~~~~~~  299 (316)
T 3im9_A          274 GV--DHFIEIGPGKVLSGLIKKINRDVK  299 (316)
T ss_dssp             TE--EEEEEESSSCHHHHHHHHHCSSSE
T ss_pred             CC--CEEEEeCCcHHHHHHHHHHhCCCC
Confidence            88  555999999999999999987653

>3qat_A Malonyl COA-acyl carrier protein transacylase; seattle structural genomics center for infectious disease, S bartonella, CAT-scratch disease; 1.60A {Bartonella henselae}

Probab=99.84  E-value=1.6e-21  Score=152.96  Aligned_cols=89  Identities=28%  Similarity=0.385  Sum_probs=83.1

Q ss_pred             CccchHHHHHHHhcCCCCCCCccEEeCCCCccccccccchhhhcccccCCHHHHHhHHHHhhcCCcCHHHHHHHHHhCCC
Q psy13429          1 MVPAVEPFALALKKATINDMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDANHIRRQLPKQIYKPVCWEQTLHILYERPQ   80 (116)
Q Consensus         1 M~pa~~~~~~~l~~~~~~~p~ipviSnv~g~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ql~~PV~w~~~i~~l~~~~~   80 (116)
                      |+|+.++|++.++.+.+++|++|++||++|+++.               +.+.+++||.+|+++||+|.++++.|.+.  
T Consensus       211 m~~~~~~~~~~l~~~~~~~p~ip~~S~vtg~~~~---------------~~~~~~~~~~~~l~~pV~f~~~v~~l~~~--  273 (318)
T 3qat_A          211 MQPAANAMKNALLTVNKTAPIVPLIANVSVIPES---------------DPERIVSLLVQQVTGRVRWRETIEWISAN--  273 (318)
T ss_dssp             GHHHHHHHHHHHHHSCCCCCSSCEECTTTCSEEC---------------CHHHHHHHHHHHHHSCEEHHHHHHHHHHT--
T ss_pred             HHHHHHHHHHHHhcCCCCCCCceEEECCCCCcCC---------------ChHHHHHHHHHHhhccEeHHHHHHHHHhC--
Confidence            7899999999999999999999999999999998               78889999999999999999999999998  


Q ss_pred             CCccCcEEEeCCCHHHHHHHHHHhhhcC
Q psy13429         81 GNHFPRTFECGPGKSLVTILNQVNKKAG  108 (116)
Q Consensus        81 g~~f~~~iEiGPg~~L~~l~k~~~~~~~  108 (116)
                      |+  +.|||+|||++|+++++++.++..
T Consensus       274 g~--~~fvEiGP~~~L~~~~~~~~~~~~  299 (318)
T 3qat_A          274 GV--NTLFEIGSGKVLTGLARRINKDIK  299 (318)
T ss_dssp             TE--EEEEEESSCSHHHHHHHHHCSSSE
T ss_pred             CC--CEEEEECCchHHHHHHHHhcCCCC
Confidence            88  555999999999999999987543

>3tqe_A Malonyl-COA-[acyl-carrier-protein] transacylase; fatty acid/phospholipid metabolism, transferase; HET: MSE; 1.50A {Coxiella burnetii}

Probab=99.84  E-value=2.2e-21  Score=152.14  Aligned_cols=89  Identities=33%  Similarity=0.560  Sum_probs=83.1

Q ss_pred             CccchHHHHHHHhcCCCCCCCccEEeCCCCccccccccchhhhcccccCCHHHHHhHHHHhhcCCcCHHHHHHHHHhCCC
Q psy13429          1 MVPAVEPFALALKKATINDMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDANHIRRQLPKQIYKPVCWEQTLHILYERPQ   80 (116)
Q Consensus         1 M~pa~~~~~~~l~~~~~~~p~ipviSnv~g~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ql~~PV~w~~~i~~l~~~~~   80 (116)
                      |+|+.++|++.++++.+++|++|++||++|+++.               +.+.+++||.+|+++||+|.++++.|.+.  
T Consensus       209 m~~~~~~~~~~l~~~~~~~p~ip~~S~vtg~~~~---------------~~~~~~~~~~~~l~~pV~f~~~i~~l~~~--  271 (316)
T 3tqe_A          209 MQPAADRLAQDIAKISIDSPKVPVIHNVDVVDHN---------------EANIIRGALIKQLVRPVRWVETIKYIEEQ--  271 (316)
T ss_dssp             GHHHHHHHHHHHTTSCCCCCSSCBCCTTTSSCCC---------------SHHHHHHHHHHHTTSCEEHHHHHHHHHHT--
T ss_pred             HHHHHHHHHHHHhcCCCCCCCceEEECCCCCcCC---------------ChhHHHHHHHHHHhcceeHHHHHHHHHHC--
Confidence            7899999999999999999999999999999998               77888999999999999999999999997  


Q ss_pred             CCccCcEEEeCCCHHHHHHHHHHhhhcC
Q psy13429         81 GNHFPRTFECGPGKSLVTILNQVNKKAG  108 (116)
Q Consensus        81 g~~f~~~iEiGPg~~L~~l~k~~~~~~~  108 (116)
                      |+  +.|||+|||++|++++|++.++..
T Consensus       272 g~--~~fvEiGP~~~L~~~~~~~~~~~~  297 (316)
T 3tqe_A          272 GI--KVFMECGPDNKLAGLIKRIDRQSE  297 (316)
T ss_dssp             TC--CEEEECSSSSHHHHHHHHHCTTCE
T ss_pred             CC--CEEEEECCcHHHHHHHHHhcCCCC
Confidence            88  556999999999999999987653

>2cuy_A Malonyl COA-[acyl carrier protein] transacylase; transferase, structural genomics, NPPSFA; 2.10A {Thermus thermophilus}

Probab=99.84  E-value=7.5e-21  Score=148.75  Aligned_cols=88  Identities=33%  Similarity=0.440  Sum_probs=82.0

Q ss_pred             CccchHHHHHHHhcCCCCCCCccEEeCCCCccccccccchhhhcccccCCHHHHHhHHHHhhcCCcCHHHHHHHHHhCCC
Q psy13429          1 MVPAVEPFALALKKATINDMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDANHIRRQLPKQIYKPVCWEQTLHILYERPQ   80 (116)
Q Consensus         1 M~pa~~~~~~~l~~~~~~~p~ipviSnv~g~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ql~~PV~w~~~i~~l~~~~~   80 (116)
                      |+|+.++|++.++++.+++|++|++||++|+++.               +.+.+++||.+|+++||+|.++++.|.+.  
T Consensus       198 m~~~~~~~~~~l~~~~~~~p~ip~~S~vtg~~~~---------------~~~~~~~~~~~~l~~pV~f~~~v~~l~~~--  260 (305)
T 2cuy_A          198 MAPARKRLAEDLAQVPLRRPRFPVYSNVTARPEE---------------DPERIRALLLEQITAPVRWVEILRDMEAR--  260 (305)
T ss_dssp             GHHHHHHHHHHHTTCCCCCCSSCEECTTTSSEEC---------------CHHHHHHHHHHGGGSCBCHHHHHHHHHHT--
T ss_pred             HHHHHHHHHHHHhcCCCCCCCeeEEECCCCCccC---------------ChhHHHHHHHHHHhhhCcHHHHHHHHHhC--
Confidence            7899999999999999999999999999999998               77888999999999999999999999987  


Q ss_pred             CCccCcEEEeCCCHHHHHHHHHHhhhc
Q psy13429         81 GNHFPRTFECGPGKSLVTILNQVNKKA  107 (116)
Q Consensus        81 g~~f~~~iEiGPg~~L~~l~k~~~~~~  107 (116)
                      |+  +.|||+|||++|+++++++.++.
T Consensus       261 g~--~~~vEiGP~~~L~~~~~~~~~~~  285 (305)
T 2cuy_A          261 GV--KRFLEFGSGEVLKGLVLRTLKEA  285 (305)
T ss_dssp             TC--CEEEEESSCSHHHHHHHHHCSSC
T ss_pred             CC--CEEEEeCCcHHHHHHHHHhcCCC
Confidence            88  55699999999999999997543

>2qc3_A MCT, malonyl COA-acyl carrier protein transacylase; malonyl-COA:ACP transacylase, , nucleophili fatty acids biosynthesis; 2.30A {Mycobacterium tuberculosis} PDB: 2qj3_A

Probab=99.84  E-value=3.8e-21  Score=150.27  Aligned_cols=89  Identities=27%  Similarity=0.312  Sum_probs=82.9

Q ss_pred             CccchHHHHHHHhcCCCCCCCccEEeCCCCccccccccchhhhcccccCCHHHHHhHHHHhhcCCcCHHHHHHHHHhCCC
Q psy13429          1 MVPAVEPFALALKKATINDMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDANHIRRQLPKQIYKPVCWEQTLHILYERPQ   80 (116)
Q Consensus         1 M~pa~~~~~~~l~~~~~~~p~ipviSnv~g~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ql~~PV~w~~~i~~l~~~~~   80 (116)
                      |+|+.++|++.++++.+++|++|++||++|+++.               +.+.+++||.+|+++||+|.++++.|.+.  
T Consensus       199 m~~~~~~~~~~l~~~~~~~p~ip~~S~vtg~~~~---------------~~~~~~~~~~~~l~~pV~f~~~i~~l~~~--  261 (303)
T 2qc3_A          199 MAPALDGFAAAAANIATADPTATLLSNRDGKPVT---------------SAAAAMDTLVSQLTQPVRWDLCTATLREH--  261 (303)
T ss_dssp             GGGGHHHHHHHHHTSCCCCCSSEEBCTTTSCBCC---------------SHHHHHHHHHHGGGSCEEHHHHHHHHHHT--
T ss_pred             HHHHHHHHHHHHHhCCCCCCCeEEEECCCCCccC---------------CchHHHHHHHHHHhccEeHHHHHHHHHHC--
Confidence            7899999999999999999999999999999998               77888999999999999999999999998  


Q ss_pred             CCccCcEEEeCCCHHHHHHHHHHhhhcC
Q psy13429         81 GNHFPRTFECGPGKSLVTILNQVNKKAG  108 (116)
Q Consensus        81 g~~f~~~iEiGPg~~L~~l~k~~~~~~~  108 (116)
                      |+  +.|||+|||++|+++++++.++..
T Consensus       262 g~--~~~vEiGP~~~L~~~~~~~~~~~~  287 (303)
T 2qc3_A          262 TV--TAIVEFPPAGTLSGIAKRELRGVP  287 (303)
T ss_dssp             TE--EEEEECSSCCSHHHHHHHHSTTCC
T ss_pred             CC--CEEEEECCHHHHHHHHHHhcCCCC
Confidence            88  555999999999999999987643

>3ptw_A Malonyl COA-acyl carrier protein transacylase; structural genomics, protein structure initiative; 2.10A {Clostridium perfringens}

Probab=99.83  E-value=3.3e-21  Score=152.90  Aligned_cols=88  Identities=33%  Similarity=0.493  Sum_probs=81.4

Q ss_pred             CccchHHHHHHHhcCCCCCCCccEEeCCCCccccccccchhhhcccccCCHHHHHhHHHHhhcCCcCHHHHHHHHHhCCC
Q psy13429          1 MVPAVEPFALALKKATINDMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDANHIRRQLPKQIYKPVCWEQTLHILYERPQ   80 (116)
Q Consensus         1 M~pa~~~~~~~l~~~~~~~p~ipviSnv~g~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ql~~PV~w~~~i~~l~~~~~   80 (116)
                      |+|+.++|++.|+++.+++|++|++||++|+++.               +.+.+++||.+|+++||+|.++++.|.+.  
T Consensus       203 m~~~~~~~~~~l~~~~~~~p~ip~~S~vtg~~~~---------------~~~~~~~~~~~~l~~pV~f~~~v~~l~~~--  265 (336)
T 3ptw_A          203 LQPAAEKLEDELNKISINKLNGIVMSNVKGEAYL---------------EDDNIIELLTSQVKKPVLFINDIEKMIES--  265 (336)
T ss_dssp             GHHHHHHHHHHHTTSCCCCCCSEEEETTTTEECC---------------TTSCHHHHHHHHTTSCBCHHHHHHHHHHT--
T ss_pred             HHHHHHHHHHHHhcCCCCCCCceEEECCCCcccC---------------ChhhHHHHHHHHhhcceeHHHHHHHHHhC--
Confidence            7899999999999999999999999999999997               55668999999999999999999999998  


Q ss_pred             CCccCcEEEeCCCHHHHHHHHHHhhhc
Q psy13429         81 GNHFPRTFECGPGKSLVTILNQVNKKA  107 (116)
Q Consensus        81 g~~f~~~iEiGPg~~L~~l~k~~~~~~  107 (116)
                      |+  +.|||+|||++|+++++++.++.
T Consensus       266 g~--~~fvEiGP~~~L~~~i~~~~~~~  290 (336)
T 3ptw_A          266 GV--DTFIEIGPGKALSGFVKKINKNV  290 (336)
T ss_dssp             TC--CEEEEESSCSHHHHHHHHHCSSS
T ss_pred             CC--CEEEEeCCcHHHHHHHHHHcCCC
Confidence            88  55699999999999999997654

>1nm2_A Malonyl COA:acyl carrier protein malonyltransfera; alpha/beta hydrolase-like core; 2.00A {Streptomyces coelicolor} SCOP: c.19.1.1 d.58.23.1 PDB: 2cdh_4 2cf2_B

Probab=99.83  E-value=5.7e-21  Score=150.11  Aligned_cols=88  Identities=27%  Similarity=0.379  Sum_probs=82.4

Q ss_pred             CccchHHHHHHHhcCCCCCCCccEEeCCCCccccccccchhhhcccccCCHHHHHhHHHHhhcCCcCHHHHHHHHHhCCC
Q psy13429          1 MVPAVEPFALALKKATINDMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDANHIRRQLPKQIYKPVCWEQTLHILYERPQ   80 (116)
Q Consensus         1 M~pa~~~~~~~l~~~~~~~p~ipviSnv~g~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ql~~PV~w~~~i~~l~~~~~   80 (116)
                      |+|+.++|++.++++.+++|++|++||++|+++.               +.+.+++||.+|+++||+|.++++.|.+.  
T Consensus       206 m~~~~~~~~~~l~~~~~~~p~ipv~S~vtg~~~~---------------~~~~~~~~~~~~l~~pV~f~~~v~~l~~~--  268 (317)
T 1nm2_A          206 MAPAVDKLAEAAKALTPADPKVTYVSNKDGRAVA---------------SGTEVLDRLVGQVANPVRWDLCMETFKEL--  268 (317)
T ss_dssp             GHHHHHHHHHHHTTCCCCCCSSEEBCTTTSCBCC---------------CHHHHHHHHHHHTTSCEEHHHHHHHHHHT--
T ss_pred             HHHHHHHHHHHHHhCCCCCCCceEEECCCCcccc---------------CchhHHHHHHHHhhCcEeHHHHHHHHHhC--
Confidence            7899999999999999999999999999999998               77888999999999999999999999987  


Q ss_pred             CCccCcEEEeCCCHHHHHHHHHHhhhc
Q psy13429         81 GNHFPRTFECGPGKSLVTILNQVNKKA  107 (116)
Q Consensus        81 g~~f~~~iEiGPg~~L~~l~k~~~~~~  107 (116)
                      |+  +.|||+|||++|+++++++.++.
T Consensus       269 g~--~~~vEiGP~~~L~~~~~~~~~~~  293 (317)
T 1nm2_A          269 GV--TAIIEVCPGGTLTGLAKRALPGV  293 (317)
T ss_dssp             TC--CEEEECSSCSHHHHHHHHHSTTC
T ss_pred             CC--CEEEEECChHHHHHHHHHhcCCC
Confidence            88  55699999999999999998654

>1mla_A Malonyl-coenzyme A acyl carrier protein transacylase; acyltransferase; 1.50A {Escherichia coli} SCOP: c.19.1.1 d.58.23.1 PDB: 2g2o_A 2g1h_A 2g2y_A 2g2z_A* 3h0p_A 3hjv_A*

Probab=99.83  E-value=7.4e-21  Score=148.87  Aligned_cols=87  Identities=33%  Similarity=0.596  Sum_probs=81.6

Q ss_pred             CccchHHHHHHHhcCCCCCCCccEEeCCCCccccccccchhhhcccccCCHHHHHhHHHHhhcCCcCHHHHHHHHHhCCC
Q psy13429          1 MVPAVEPFALALKKATINDMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDANHIRRQLPKQIYKPVCWEQTLHILYERPQ   80 (116)
Q Consensus         1 M~pa~~~~~~~l~~~~~~~p~ipviSnv~g~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ql~~PV~w~~~i~~l~~~~~   80 (116)
                      |+|+.++|++.++++.+++|++|++||++|+++.               +.+.+++||.+|+++||+|.++++.|.+.  
T Consensus       205 m~~~~~~~~~~l~~~~~~~p~ip~~S~vtg~~~~---------------~~~~~~~~~~~~l~~pV~f~~~v~~l~~~--  267 (309)
T 1mla_A          205 MKPAADKLAVELAKITFNAPTVPVVNNVDVKCET---------------NGDAIRDALVRQLYNPVQWTKSVEYMAAQ--  267 (309)
T ss_dssp             GHHHHHHHHHHHHTSCCCCCSSCBBCTTTCCBCC---------------SHHHHHHHHHHHHHSCEEHHHHHHHHHHT--
T ss_pred             HHHHHHHHHHHHhcCCCCCCCceEEECCCCCccc---------------ChHHHHHHHHHHHhccEeHHHHHHHHHhC--
Confidence            7899999999999999999999999999999998               77888999999999999999999999987  


Q ss_pred             CCccCcEEEeCCCHHHHHHHHHHhhh
Q psy13429         81 GNHFPRTFECGPGKSLVTILNQVNKK  106 (116)
Q Consensus        81 g~~f~~~iEiGPg~~L~~l~k~~~~~  106 (116)
                      |+  +.|||+|||++|+++++++.++
T Consensus       268 g~--~~~vEiGP~~~L~~~~~~~~~~  291 (309)
T 1mla_A          268 GV--EHLYEVGPGKVLTGLTKRIVDT  291 (309)
T ss_dssp             TC--CEEEECSSSSHHHHHHHHHCTT
T ss_pred             CC--CEEEEECCcHHHHHHHHHhcCC
Confidence            88  5569999999999999999754

>3im8_A Malonyl acyl carrier protein transacylase; fatty acid synthesis, malonyl-COA, acyl carrier protein TRAN (MCAT), FABD, acyltransferase; 2.10A {Streptococcus pneumoniae}

Probab=99.83  E-value=5.7e-21  Score=149.37  Aligned_cols=87  Identities=24%  Similarity=0.490  Sum_probs=80.3

Q ss_pred             CccchHHHHHHHhcCCCCCCCccEEeCCCCccccccccchhhhcccccCCHHHHHhHHHHhhcCCcCHHHHHHHHHhCCC
Q psy13429          1 MVPAVEPFALALKKATINDMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDANHIRRQLPKQIYKPVCWEQTLHILYERPQ   80 (116)
Q Consensus         1 M~pa~~~~~~~l~~~~~~~p~ipviSnv~g~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ql~~PV~w~~~i~~l~~~~~   80 (116)
                      |+|+.++|++.++++.+++|++|++||++|+++.                .+.+++||.+|+++||+|.++++.|.+.  
T Consensus       203 m~~~~~~~~~~l~~~~~~~p~ip~~S~~tg~~~~----------------~~~~~~~~~~~l~~pV~f~~~v~~l~~~--  264 (307)
T 3im8_A          203 LEPASQKLAETLAQVSFSDFTCPLVGNTEAAVMQ----------------KEDIAQLLTRQVKEPVRFYESIGVMQEA--  264 (307)
T ss_dssp             GHHHHHHHHHHHHTCCCCCCSSCBBCTTTSSBCC----------------GGGHHHHHHHHTTSCEEHHHHHHHHHHT--
T ss_pred             HHHHHHHHHHHHhcCCCCCCceEEEEcCCCccCC----------------hhHHHHHHHHHhhhheeHHHHHHHHHhC--
Confidence            7899999999999999999999999999999875                4557999999999999999999999998  


Q ss_pred             CCccCcEEEeCCCHHHHHHHHHHhhhc
Q psy13429         81 GNHFPRTFECGPGKSLVTILNQVNKKA  107 (116)
Q Consensus        81 g~~f~~~iEiGPg~~L~~l~k~~~~~~  107 (116)
                      |+  +.|||+|||++|+++++++.++.
T Consensus       265 g~--~~~iEiGP~~~L~~~~~~~~~~~  289 (307)
T 3im8_A          265 GI--SNFIEIGPGKVLSGFVKKIDQTA  289 (307)
T ss_dssp             TC--CEEEEESSCSHHHHHHHHHCTTS
T ss_pred             CC--CEEEEECCcHHHHHHHHHhcCCC
Confidence            88  55699999999999999998764

>2h1y_A Malonyl coenzyme A-acyl carrier protein transacyl; FABD, MCAT, transferase; 2.50A {Helicobacter pylori}

Probab=99.81  E-value=2.2e-20  Score=147.44  Aligned_cols=86  Identities=20%  Similarity=0.291  Sum_probs=79.5

Q ss_pred             CccchHHHHHHHhcCCCCCCCccEEeCCCCccccccccchhhhcccccCCHHHHHhHHHHhhcCCcCHHHHHHHHHhCCC
Q psy13429          1 MVPAVEPFALALKKATINDMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDANHIRRQLPKQIYKPVCWEQTLHILYERPQ   80 (116)
Q Consensus         1 M~pa~~~~~~~l~~~~~~~p~ipviSnv~g~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ql~~PV~w~~~i~~l~~~~~   80 (116)
                      |+|+.++|++.|+++.+++|++|++||++|+++.               +.+.+++||.+|+++||+|.++++.|.+.  
T Consensus       214 m~~~~~~~~~~l~~~~~~~p~ip~~S~vtg~~~~---------------~~~~~~~~~~~~l~~pV~f~~ai~~l~~~--  276 (321)
T 2h1y_A          214 LEPMIFKFQELLEKSLKDKFHFEIISNATNEAYH---------------NKAKAVELLSLQLTQPVRYQDCVKSNNDR--  276 (321)
T ss_dssp             GGGGHHHHHHHHHHHCCSCCSSEEECTTTSCEEC---------------SHHHHHHHHHHHTTSCBCHHHHHHTTGGG--
T ss_pred             HHHHHHHHHHHHhcCCCCCCCceEEECCCCCccC---------------ChhhHHHHHHHHHhccCcHHHHHHHHHhc--
Confidence            7999999999999999999999999999999998               77888999999999999999999999874  


Q ss_pred             CCccCcEEEeCCCHHHHHHHHHHhhhc
Q psy13429         81 GNHFPRTFECGPGKSLVTILNQVNKKA  107 (116)
Q Consensus        81 g~~f~~~iEiGPg~~L~~l~k~~~~~~  107 (116)
                       +  +.|||+|||++|+++++++ ++.
T Consensus       277 -~--~~fvEiGP~~~L~~~i~~~-~~~  299 (321)
T 2h1y_A          277 -V--DIFFELGCGSVLKGLNKRL-SNK  299 (321)
T ss_dssp             -C--SEEEEESSSSHHHHHHHTT-CSS
T ss_pred             -C--CEEEEECChHHHHHHHHhC-CCC
Confidence             4  5569999999999999998 543

>3tzy_A Polyketide synthase PKS13; acyltransferase, long fatty acid chain transferase, acyl CAR protein, transferase; HET: PLM; 2.20A {Mycobacterium tuberculosis} PDB: 3tzw_A 3tzx_A* 3tzz_A*

Probab=99.77  E-value=8e-19  Score=145.60  Aligned_cols=94  Identities=15%  Similarity=0.138  Sum_probs=79.9

Q ss_pred             CccchHHHHHHHhcCCCCCCCccEEeCCCCccccccccchhhhcccccCCHHHHHhHHHHhhcCCcCHHHHHHHHHhCCC
Q psy13429          1 MVPAVEPFALALKKATINDMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDANHIRRQLPKQIYKPVCWEQTLHILYERPQ   80 (116)
Q Consensus         1 M~pa~~~~~~~l~~~~~~~p~ipviSnv~g~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ql~~PV~w~~~i~~l~~~~~   80 (116)
                      |+|+.++|++.|+.+.+++|++|++||++|..+...           ..+....++||.+|+++||+|.++|+.|.+.  
T Consensus       342 m~~~~~~~~~~l~~i~~~~p~ip~~S~vt~~~~~~~-----------~~~~~~~~~yw~~~l~~pV~F~~av~~l~~~--  408 (491)
T 3tzy_A          342 MDPLLGELTAELQGIKPTSPTCGIFSTVHEGRYIKP-----------GGEPIHDVEYWKKGLRHSVYFTHGIRNAVDS--  408 (491)
T ss_dssp             GGGGHHHHHHHTTTCCCCCCSSEEEETTTTTEEECT-----------TCCCCCSHHHHHHHHHSCBCHHHHHHHHHHT--
T ss_pred             hhhhHHHHHHHHhcCCCCCCCccEEEeccCCcccCC-----------CcchhcCHHHHHHHhhccccHHHHHHHHHHC--
Confidence            899999999999999999999999999998766410           0011234799999999999999999999998  


Q ss_pred             CCccCcEEEeCCCHHHHHHHHHHhhhcCC
Q psy13429         81 GNHFPRTFECGPGKSLVTILNQVNKKAGD  109 (116)
Q Consensus        81 g~~f~~~iEiGPg~~L~~l~k~~~~~~~~  109 (116)
                      |+  +.|||||||++|+++++++.++.+.
T Consensus       409 g~--~~fvEiGP~~vL~~~i~~~l~~~~~  435 (491)
T 3tzy_A          409 GH--TTFLELAPNPVALMQVALTTADAGL  435 (491)
T ss_dssp             TC--CEEEECSSSCHHHHHHHHHHHHTTC
T ss_pred             CC--CEEEEeCCCHHHHHHHHHHhhhcCC
Confidence            88  5569999999999999999876543

>3g87_A Malonyl COA-acyl carrier protein transacylase; ssgcid, niaid, decode biostructures, dried seaweed, acyltran transferase; 2.30A {Burkholderia pseudomallei}

Probab=99.77  E-value=3.8e-19  Score=144.02  Aligned_cols=92  Identities=27%  Similarity=0.451  Sum_probs=80.0

Q ss_pred             CccchHHHHHHHhcCCCCCCCccEEeCCCCccccccccchhhhcccccCCHHHHHhHHHHhhcCCcCHHHHHHHHHhCCC
Q psy13429          1 MVPAVEPFALALKKATINDMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDANHIRRQLPKQIYKPVCWEQTLHILYERPQ   80 (116)
Q Consensus         1 M~pa~~~~~~~l~~~~~~~p~ipviSnv~g~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ql~~PV~w~~~i~~l~~~~~   80 (116)
                      |+|+.++|++.++.+.+++|++|++||++|+++.               + +.+++||.+|+++||+|.++++.|.+.  
T Consensus       200 m~~~~~~~~~~l~~~~~~~p~ipv~S~vtg~~~~---------------~-~~~~~~~~~~l~~pV~f~~av~~l~~~--  261 (394)
T 3g87_A          200 MRPAQQAFAAHLQSFRLADPAIPVISNVSARPYE---------------N-GRVSEGLAQQIASPVRWCESIRYLLAL--  261 (394)
T ss_dssp             GHHHHHHHHHHHTTSCCCCCSSCEECTTTSSBCC---------------T-TCHHHHHHHGGGSCBCHHHHHHHHHHH--
T ss_pred             hhhhHHHHHHHHhcCCCCCCCceEEECCCCcCCC---------------c-hHHHHHHHHHHhCceeHHHHHHHHHhc--
Confidence            7899999999999999999999999999999986               3 456899999999999999999999875  


Q ss_pred             CC---ccCcEEEeCCCHHHHHHHHHHhhhcCCC
Q psy13429         81 GN---HFPRTFECGPGKSLVTILNQVNKKAGDS  110 (116)
Q Consensus        81 g~---~f~~~iEiGPg~~L~~l~k~~~~~~~~~  110 (116)
                      |+   ..+.|||+|||++|+++++++.++....
T Consensus       262 g~~~~~~~~fvEiGP~~~L~~li~~il~~~~~~  294 (394)
T 3g87_A          262 AAERGEAIEFTELGHGDVLTRLVHTIRRQTPAP  294 (394)
T ss_dssp             HHHTTCCEEEEECSSSSHHHHHHHHHHHSSCC-
T ss_pred             CCCcCCCCEEEEeCCcHHHHHHHHHHhccCCcc
Confidence            32   0134599999999999999999876543

>4amm_A DYNE8; transferase; 1.40A {Micromonospora chersina} PDB: 4amn_A 4amp_A 4amo_A

Probab=99.70  E-value=1.1e-17  Score=135.26  Aligned_cols=80  Identities=26%  Similarity=0.368  Sum_probs=72.6

Q ss_pred             CccchHHHHHHHhcCCCCCCCccEEeCCCCccccccccchhhhcccccCCHHHHHhHHHHhhcCCcCHHHHHHHHHhCCC
Q psy13429          1 MVPAVEPFALALKKATINDMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDANHIRRQLPKQIYKPVCWEQTLHILYERPQ   80 (116)
Q Consensus         1 M~pa~~~~~~~l~~~~~~~p~ipviSnv~g~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ql~~PV~w~~~i~~l~~~~~   80 (116)
                      |+|+.++|++.++.+.+++|++|++||++|+ +.               +.+.+++||.+|+++||+|.++++.|.    
T Consensus       282 m~~~~~~~~~~l~~~~~~~p~ip~~S~vtg~-~~---------------~~~~~~~y~~~~l~~pV~f~~av~~l~----  341 (401)
T 4amm_A          282 MAPAAEALRRAAGRLPWRRPERPVASTVTGA-WW---------------ADEDPVEVLVRQLTGPVRFREALGLLD----  341 (401)
T ss_dssp             GHHHHHHHHHHHHTSCCCCCSSCEECTTTSS-BC---------------CSCCHHHHHHHHHHSCEEHHHHHHHSC----
T ss_pred             HHHHHHHHHHHHhhCCCCCCCceEEECCCCC-cC---------------ChhHHHHHHHHHHHHHeeHHHHHHHhc----
Confidence            7899999999999999999999999999999 66               445568999999999999999999987    


Q ss_pred             CCccCcEEEeCCCHHHHHHHHHHh
Q psy13429         81 GNHFPRTFECGPGKSLVTILNQVN  104 (116)
Q Consensus        81 g~~f~~~iEiGPg~~L~~l~k~~~  104 (116)
                       +  +.|||+|||++|+++ +++.
T Consensus       342 -~--~~fvEiGP~~~L~~~-~~~~  361 (401)
T 4amm_A          342 -A--DLLVEVGPGRMLSAL-AEAA  361 (401)
T ss_dssp             -C--SEEEECSSSSHHHHH-HHHT
T ss_pred             -C--CEEEEeCCcHHHHHH-Hhcc
Confidence             2  445999999999999 9986

>2qo3_A Eryaii erythromycin polyketide synthase modules 3; ketosynthase, acyltransferase, phosphopantetheine, transfera; 2.59A {Saccharopolyspora erythraea}

Probab=99.68  E-value=3.7e-17  Score=143.64  Aligned_cols=88  Identities=15%  Similarity=0.168  Sum_probs=80.6

Q ss_pred             CccchHHHHHHHhcCCCCCCCccEEeCCCCccccccccchhhhcccccCCHHHHHhHHHHhhcCCcCHHHHHHHHHhCCC
Q psy13429          1 MVPAVEPFALALKKATINDMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDANHIRRQLPKQIYKPVCWEQTLHILYERPQ   80 (116)
Q Consensus         1 M~pa~~~~~~~l~~~~~~~p~ipviSnv~g~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ql~~PV~w~~~i~~l~~~~~   80 (116)
                      |+|+.++|++.|+.+.+++|++|++||++|+++.               +.+..++||.+|+++||+|.++++.|.+.  
T Consensus       733 m~~~~~~~~~~l~~i~~~~p~ip~~S~vtg~~~~---------------~~~~~~~yw~~~l~~pV~F~~av~~l~~~--  795 (915)
T 2qo3_A          733 IERVREELLETTGDIAPRPARVTFHSTVESRSMD---------------GTELDARYWYRNLRETVRFADAVTRLAES--  795 (915)
T ss_dssp             GTTTHHHHHHHHTTCCCCCCSSEEECTTTCSEEC---------------GGGCCHHHHHHHHHSCEEHHHHHHHHHHT--
T ss_pred             HHHHHHHHHHHHhccCCCCCCCeEEeCCCCcccC---------------cccCCHHHHHHHhhCcCCHHHHHHHHHhC--
Confidence            7899999999999999999999999999999987               44456899999999999999999999987  


Q ss_pred             CCccCcEEEeCCCHHHHHHHHHHhhhc
Q psy13429         81 GNHFPRTFECGPGKSLVTILNQVNKKA  107 (116)
Q Consensus        81 g~~f~~~iEiGPg~~L~~l~k~~~~~~  107 (116)
                      |+  +.|||+|||++|+++++++++..
T Consensus       796 g~--~~fvEiGP~~~L~~~~~~~l~~~  820 (915)
T 2qo3_A          796 GY--DAFIEVSPHPVVVQAVEEAVEEA  820 (915)
T ss_dssp             TC--CEEEECSSSCSSHHHHHHHHHTS
T ss_pred             CC--CEEEEeCCChhhhhhHHHhhhhc
Confidence            87  55699999999999999998764

>2hg4_A DEBS, 6-deoxyerythronolide B synthase; ketosynthase, acyltransferase, module 5, transferase; 2.73A {Saccharopolyspora erythraea}

Probab=99.67  E-value=6.7e-17  Score=142.03  Aligned_cols=89  Identities=15%  Similarity=0.060  Sum_probs=80.7

Q ss_pred             CccchHHHHHHHhcCCCCCCCccEEeCCCCccccccccchhhhcccccCCHHHHHhHHHHhhcCCcCHHHHHHHHHhCCC
Q psy13429          1 MVPAVEPFALALKKATINDMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDANHIRRQLPKQIYKPVCWEQTLHILYERPQ   80 (116)
Q Consensus         1 M~pa~~~~~~~l~~~~~~~p~ipviSnv~g~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ql~~PV~w~~~i~~l~~~~~   80 (116)
                      |+|+.++|++.++.+.+++|++|++||++|+++.               +.+..++||.+|+++||+|.++++.|.+.  
T Consensus       749 m~~~~~~~~~~l~~i~~~~p~ip~~S~vtg~~~~---------------~~~~~~~yw~~~l~~pV~F~~av~~l~~~--  811 (917)
T 2hg4_A          749 VESLREELLTELAGISPVSADVALYSTTTGQPID---------------TATMDTAYWYANLREQVRFQDATRQLAEA--  811 (917)
T ss_dssp             GGGGHHHHHHHSTTCCCCCCSSEECCTTTSSCCC---------------GGGCSHHHHHHHHHSCCCHHHHHHHHHHT--
T ss_pred             hHHHHHHHHHHHhcCCCCCCcceEEecCCCcccC---------------cccCCHHHHHHHhhCcccHHHHHHHHHhC--
Confidence            8899999999999999999999999999999886               44446899999999999999999999987  


Q ss_pred             CCccCcEEEeCCCHHHHHHHHHHhhhcC
Q psy13429         81 GNHFPRTFECGPGKSLVTILNQVNKKAG  108 (116)
Q Consensus        81 g~~f~~~iEiGPg~~L~~l~k~~~~~~~  108 (116)
                      |+  +.|||+|||++|+++++++++..+
T Consensus       812 g~--~~fvEiGP~~~L~~~~~~~l~~~~  837 (917)
T 2hg4_A          812 GF--DAFVEVSPHPVLTVGIEATLDSAL  837 (917)
T ss_dssp             TC--CEEEECSSSCSSHHHHHHHHHHHS
T ss_pred             CC--CEEEEeCCChHHHHHHHHHHhhcc
Confidence            87  556999999999999999987643

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=99.48  E-value=1.8e-14  Score=138.08  Aligned_cols=102  Identities=18%  Similarity=0.216  Sum_probs=79.7

Q ss_pred             CccchHHHHHHHhcC-----CCCCCCccEEeCCCCccccccc-----------cc-hhhhcccccC---C-HHH-----H
Q psy13429          1 MVPAVEPFALALKKA-----TINDMIIPVHSNVDGKIYRGEN-----------KE-VSLSVSSLFR---D-ANH-----I   54 (116)
Q Consensus         1 M~pa~~~~~~~l~~~-----~~~~p~ipviSnv~g~~~~~~~-----------~~-~~~~~~~~~~---~-~~~-----i   54 (116)
                      |+|+.++|+++|+++     .++.|.+|++||++|+++....           .+ +.-...+|++   + ++.     +
T Consensus      1586 m~p~~~~~~~~L~~~~~~~~~~~~p~ip~iSnvtg~~~~~~~~~~~~~~~~~~s~~~~~~l~~~~~w~~~~~~~l~~~~~ 1665 (3089)
T 3zen_D         1586 LRVGVADFRRSLERVMPRDKDPELIIGRYIPNLVPRPFTLDRDFIQEIRDLVPAEPLDEVLADYDTWRNEKPKELCRKVV 1665 (3089)
T ss_dssp             CGGGHHHHHHHHHHHSCSCCCHHHHTTTEECSSSCSCCCCSHHHHHHHHHHSCCHHHHHHHHCCCCCSTTHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhcccCCCCCCCCCceEEeCCCCceeeccccccccccccccccccccccCChHHhhhcchhhhhhhhH
Confidence            899999999999998     4556889999999999986210           00 1112223333   3 334     6


Q ss_pred             HhHHHHhhcCCcCHHHHHHHHHh------CCCCCccCcEEEeCCCH--HHHHHHHHHhhh
Q psy13429         55 RRQLPKQIYKPVCWEQTLHILYE------RPQGNHFPRTFECGPGK--SLVTILNQVNKK  106 (116)
Q Consensus        55 ~~~l~~ql~~PV~w~~~i~~l~~------~~~g~~f~~~iEiGPg~--~L~~l~k~~~~~  106 (116)
                      ++||++|+++||+|.++++.|.+      .  |+  +.|||+|||+  +|++|++++++.
T Consensus      1666 ~e~l~~ql~~PVrf~~av~~l~~~~~~~~~--g~--~~fvEiGPg~~p~L~~lvk~~l~~ 1721 (3089)
T 3zen_D         1666 IELLAWQFASPVRWIETQDLLFIEEAAGGL--GV--ERFVEIGVKSAPTVAGLATNTLKL 1721 (3089)
T ss_dssp             HHHHHTTTTSCEEHHHHHHHHHHHHHHHCC--CC--EEEEECSGGGHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHhCcchHHHHHHHHHhhccccCC--CC--cEEEEECCCChhhhhhHHHHhhcc
Confidence            79999999999999999999998      4  77  5569999999  999999999964

>2uv8_G Fatty acid synthase subunit beta (FAS1); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_G* 3hmj_G*

Probab=99.42  E-value=9e-14  Score=129.98  Aligned_cols=83  Identities=27%  Similarity=0.438  Sum_probs=74.3

Q ss_pred             CccchHHHHHHHh--cCCC--CCCCccEEeCCCCccccccccchhhhcccccCCHHHHHhHHHHhhc-CCcCHHHHHHHH
Q psy13429          1 MVPAVEPFALALK--KATI--NDMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDANHIRRQLPKQIY-KPVCWEQTLHIL   75 (116)
Q Consensus         1 M~pa~~~~~~~l~--~~~~--~~p~ipviSnv~g~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ql~-~PV~w~~~i~~l   75 (116)
                      |+|+++.|++.|+  ++.|  ++|++|++||++|+.+..              +.+.++++|.+|++ +||+|.++++. 
T Consensus       432 M~pa~~~l~~~L~~~~i~~~~~~p~iPv~SnvtG~~~~~--------------~~~~i~~~L~~qi~~~PV~w~~av~~-  496 (2051)
T 2uv8_G          432 LVPASDLINKDLVKNNVSFNAKDIQIPVYDTFDGSDLRV--------------LSGSISERIVDCIIRLPVKWETTTQF-  496 (2051)
T ss_dssp             THHHHHHHHHHHHSSSCCCCTTTCCSCBBCTTTCSBSSS--------------CSSCHHHHHHHHHHTSCBCHHHHTCC-
T ss_pred             hHHHHHHHHHHHHhCCccccCCCCcceEEECCCCcccCC--------------chHHHHHHHHHhhccCccchHHHhcc-
Confidence            8899999999999  8999  999999999999999972              25678999999999 99999999974 


Q ss_pred             HhCCCCCccCcEEEeCCCHH--HHHHHHHHhh
Q psy13429         76 YERPQGNHFPRTFECGPGKS--LVTILNQVNK  105 (116)
Q Consensus        76 ~~~~~g~~f~~~iEiGPg~~--L~~l~k~~~~  105 (116)
                           |+  +.|||+|||++  |++|++++..
T Consensus       497 -----G~--~~fvEiGPG~~sgLt~L~kril~  521 (2051)
T 2uv8_G          497 -----KA--THILDFGPGGASGLGVLTHRNKD  521 (2051)
T ss_dssp             -----CC--SEEEECSSSGGGSHHHHHHHHHT
T ss_pred             -----CC--CEEEEcCCCChHHHHHHHHHhhc
Confidence                 66  55599999999  9999999974

>3hhd_A Fatty acid synthase; transferase, multienzyme, megasynthase, fatty acid synthesis, acetylation, cytoplasm, fatty acid biosynthesis, hydrolase; 2.15A {Homo sapiens} PDB: 2jfk_A* 2jfd_A

Probab=99.29  E-value=1.1e-12  Score=115.84  Aligned_cols=86  Identities=17%  Similarity=0.125  Sum_probs=69.6

Q ss_pred             CccchHHHHHHHhcCC--CCCCCccEEeCCCCccccccccchhhhcccccCCH-HH--HHhHHHHhhcCCcCHHHHHHHH
Q psy13429          1 MVPAVEPFALALKKAT--INDMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDA-NH--IRRQLPKQIYKPVCWEQTLHIL   75 (116)
Q Consensus         1 M~pa~~~~~~~l~~~~--~~~p~ipviSnv~g~~~~~~~~~~~~~~~~~~~~~-~~--i~~~l~~ql~~PV~w~~~i~~l   75 (116)
                      |+|+.++|++.|+++.  ...+.+|++|++++.....              +. ..  .++||.+|+++||+|.++++.|
T Consensus       689 m~~~~~~~~~~l~~~~~~~~~~~~~~~s~~~~~~~~~--------------~~~~~~~~~~yw~~~l~~pV~F~~av~~l  754 (965)
T 3hhd_A          689 MEAIAPPLLQELKKVIREPKPRSARWLSTSIPEAQWH--------------SSLARTSSAEYNVNNLVSPVLFQEALWHV  754 (965)
T ss_dssp             GGGGHHHHHHHHHHHCSSCCBCCTTBCCSSSCGGGTT--------------SHHHHBCCHHHHHHHHHSCBCHHHHHTTS
T ss_pred             hcccHHHHHHHHHHhhccCCCCcceEEeeeccccccc--------------ccchhcccHHHHHHHhhCcEeHHHHHHHH
Confidence            8999999999999974  3457789999999764431              11 22  4789999999999999999998


Q ss_pred             HhCCCCCccCcEEEeCCCHHHHHHHHHHhhh
Q psy13429         76 YERPQGNHFPRTFECGPGKSLVTILNQVNKK  106 (116)
Q Consensus        76 ~~~~~g~~f~~~iEiGPg~~L~~l~k~~~~~  106 (116)
                      .+.  + .|   ||+|||++|+++++++.+.
T Consensus       755 ~~~--~-~f---vEiGP~~~L~~~~~~~l~~  779 (965)
T 3hhd_A          755 PEH--A-VV---LEIAPHALLQAVLKRGLKP  779 (965)
T ss_dssp             CTT--C-EE---EEESSSCTTHHHHHHHSCT
T ss_pred             hcC--C-EE---EEeCChHHHHHHHHHHhCC
Confidence            754  3 45   9999999999999998753

>2uva_G Fatty acid synthase beta subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; HET: FMN; 3.10A {Thermomyces lanuginosus} PDB: 2uvc_G*

Probab=99.27  E-value=9.2e-13  Score=123.41  Aligned_cols=88  Identities=22%  Similarity=0.349  Sum_probs=75.3

Q ss_pred             CccchHHHHHHHhcCCC--CCCCccEEeCCCCccccccccchhhhcccccCCHHHHHhHHHHhhc-CCcCHHHHHHHHHh
Q psy13429          1 MVPAVEPFALALKKATI--NDMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDANHIRRQLPKQIY-KPVCWEQTLHILYE   77 (116)
Q Consensus         1 M~pa~~~~~~~l~~~~~--~~p~ipviSnv~g~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ql~-~PV~w~~~i~~l~~   77 (116)
                      |+|+.+.|.+.++.+.+  ++|++|++||++|+++...             +.+.+.++|.+|++ +||+|.++++.+  
T Consensus       426 m~~a~~~l~~~l~~i~~~~~~p~iPv~S~vtG~~~~~~-------------~~~~l~~~l~~qi~~~PV~w~~av~~l--  490 (2060)
T 2uva_G          426 LAGAHAHILGDVDDMKIPASSLVIPVYDTKTGQDLREL-------------GDEDIIPELVRMITYDPVNWETATVFP--  490 (2060)
T ss_dssp             SHHHHHHHHHHTSSSCCCGGGCSSCBBCSSSCCBGGGS-------------SSCCSHHHHHHHHHTSCBCHHHHTCCS--
T ss_pred             HHHHHHHHHHHHhhCCccCCCCCcEEEECCCCCccCcC-------------ChhHHHHHHHHHhccCcEeHHHHHHhc--
Confidence            78999999999999999  8999999999999998720             14557899999999 999999999854  


Q ss_pred             CCCCCccCcEEEeCCCHH--HHHHHHHHhhhcC
Q psy13429         78 RPQGNHFPRTFECGPGKS--LVTILNQVNKKAG  108 (116)
Q Consensus        78 ~~~g~~f~~~iEiGPg~~--L~~l~k~~~~~~~  108 (116)
                         |.  +.|||+|||++  |++|++++..+.+
T Consensus       491 ---g~--~~~IEiGPg~~s~L~~L~~~~l~g~g  518 (2060)
T 2uva_G          491 ---DA--THIVDFGPGGVSGIGVLTNRNKDGTG  518 (2060)
T ss_dssp             ---SC--SEEEECSSSTTTSHHHHHHHHTTTTT
T ss_pred             ---CC--CEEEEeCCCChHHHHHHHHHhhcCCC
Confidence               55  45599999999  9999999965443

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.11  E-value=1.7e-11  Score=116.34  Aligned_cols=89  Identities=15%  Similarity=0.116  Sum_probs=69.7

Q ss_pred             CccchHHHHHHHhcCCCC--CCCccEEeCCCCccccccccchhhhcccccCCHHHHHhHHHHhhcCCcCHHHHHHHHHhC
Q psy13429          1 MVPAVEPFALALKKATIN--DMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDANHIRRQLPKQIYKPVCWEQTLHILYER   78 (116)
Q Consensus         1 M~pa~~~~~~~l~~~~~~--~p~ipviSnv~g~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ql~~PV~w~~~i~~l~~~   78 (116)
                      |+|+.++|.+.|+.+.+.  ++.+|++|+++|.....+        . .  .....++||++|+++||+|.++++.|.+.
T Consensus       687 m~~~~~~~~~~l~~~~~~~~~~~~~~~s~~~~~~~~~~--------~-~--~~~~~~~yw~~~l~~pV~F~~av~~l~~~  755 (2512)
T 2vz8_A          687 MESIAPTLLRQLRKVILDPKPRSKRWLSTSIPEAQWQG--------S-L--ARTFSAEYSVNNLVSPVLFQEALQHVPAH  755 (2512)
T ss_dssp             GTTTHHHHHHHHHHHSCSCCBCCTTEECSSSCGGGTTS--------S-S--TTBCCHHHHHHHHHSCEEHHHHHTTSCSS
T ss_pred             HHhHHHHHHHHHHhccccCCCCCceEEEeecCCCcccC--------c-c--cccCCHHHHHHHhhccccHHHHHHhhhcC
Confidence            899999999999997653  567889999998764310        0 0  01113689999999999999999998643


Q ss_pred             CCCCccCcEEEeCCCHHHHHHHHHHhhh
Q psy13429         79 PQGNHFPRTFECGPGKSLVTILNQVNKK  106 (116)
Q Consensus        79 ~~g~~f~~~iEiGPg~~L~~l~k~~~~~  106 (116)
                        + .|   ||+|||++|+++++++.+.
T Consensus       756 --~-~f---vEiGP~~~L~~~~~~~l~~  777 (2512)
T 2vz8_A          756 --A-VV---VEIAPHALLQAVLKRSLES  777 (2512)
T ss_dssp             --C-EE---EECSSSCTTHHHHHHHSCT
T ss_pred             --C-EE---EEECCcHHHHHHHHHHhcc
Confidence              2 35   9999999999999998753

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=99.03  E-value=1.3e-10  Score=111.99  Aligned_cols=76  Identities=16%  Similarity=0.252  Sum_probs=64.2

Q ss_pred             CccchHHHHHHHhcCCCCCCCccEEeCCCCccccccccchhhhcccccCCHHHHHhHHHHhhcCCcCHHHHHHHHHhCCC
Q psy13429          1 MVPAVEPFALALKKATINDMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDANHIRRQLPKQIYKPVCWEQTLHILYERPQ   80 (116)
Q Consensus         1 M~pa~~~~~~~l~~~~~~~p~ipviSnv~g~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ql~~PV~w~~~i~~l~~~~~   80 (116)
                      |+||++.|++.|+.+.|+                                .+.++++|.+|+++||+|.++++.|.+.  
T Consensus       301 M~~A~~~l~~~l~~~~~~--------------------------------~~~i~~~l~~ql~~PV~W~~~v~~l~~~--  346 (3089)
T 3zen_D          301 LSDGIEIVGRWAETVGLD--------------------------------VELAKELTESILVRQVDWVDEITELHEA--  346 (3089)
T ss_dssp             GHHHHHHHHHHHHTTTTC--------------------------------CTTHHHHHHHHHTSCBCCHHHHHHHHTT--
T ss_pred             hHHHHHHHHHHHHhCCCC--------------------------------HHHHHHHHHHHccCcEeHHHHHHHHHHC--
Confidence            778888888888877662                                2346899999999999999999999987  


Q ss_pred             CCccCcEEEeCCCHHHHHHHHHHhhhcCCCcc
Q psy13429         81 GNHFPRTFECGPGKSLVTILNQVNKKAGDSAA  112 (116)
Q Consensus        81 g~~f~~~iEiGPg~~L~~l~k~~~~~~~~~~~  112 (116)
                      |+  +.|||+|||++|++|+|++.++.+...+
T Consensus       347 Gv--~~fiEiGPG~vL~~L~k~i~~g~gv~~v  376 (3089)
T 3zen_D          347 GA--RWILDLGPGDILTRLTAPVIRGLGIGIV  376 (3089)
T ss_dssp             TC--CEEEECSSSSCSHHHHHHHHGGGSCEEE
T ss_pred             CC--CEEEEECCchHHHHHHHHHcCCCCceEE
Confidence            88  5559999999999999999988765433

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=98.86  E-value=2e-09  Score=100.41  Aligned_cols=49  Identities=24%  Similarity=0.435  Sum_probs=45.1

Q ss_pred             HHhHHHHhhcCCcCHHHHHHHHH-hCCCCCccCcEEEeCCCHHHHHHHHHHhhh
Q psy13429         54 IRRQLPKQIYKPVCWEQTLHILY-ERPQGNHFPRTFECGPGKSLVTILNQVNKK  106 (116)
Q Consensus        54 i~~~l~~ql~~PV~w~~~i~~l~-~~~~g~~f~~~iEiGPg~~L~~l~k~~~~~  106 (116)
                      +++.|++|+++||+|.++++.|. +.  |+  ++|||+|||++|++|+|++.+.
T Consensus        14 i~~~L~~Q~~~PVrW~~t~~~l~~~~--gv--~~~iE~GPg~vL~gl~kr~~~~   63 (1887)
T 2uv8_A           14 LTELLAYQFASPVRWIETQDVFLKDF--NT--ERVVEIGPSPTLAGMAQRTLKN   63 (1887)
T ss_dssp             HHHHHHHTTTSCEEHHHHHHHHHHTS--CC--SEEEEESSSSHHHHHHHHHHHH
T ss_pred             HHHHHHHHhcCCCcHHHHHHHHHhcC--CC--cEEEEeCCchhhhchHHHhhhc
Confidence            58999999999999999999998 66  88  6669999999999999999875

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=97.71  E-value=3.2e-05  Score=72.65  Aligned_cols=50  Identities=22%  Similarity=0.379  Sum_probs=44.0

Q ss_pred             HHhHHHHhhcCCcCHHHHHHHHHhCCCCCccCcEEEeCCCHHHHHHHHHHhhh
Q psy13429         54 IRRQLPKQIYKPVCWEQTLHILYERPQGNHFPRTFECGPGKSLVTILNQVNKK  106 (116)
Q Consensus        54 i~~~l~~ql~~PV~w~~~i~~l~~~~~g~~f~~~iEiGPg~~L~~l~k~~~~~  106 (116)
                      +-+.|+-|+.+||||-+|-+.|... .++  .++|||||.++|++|.++.++.
T Consensus        14 l~eLla~qfaspvrwieTQd~l~~~-~~~--er~vEiGp~~tl~~ma~rt~~~   63 (1878)
T 2uv9_A           14 LVELLAYQFAMPVRWIETQDVILAE-KRT--ERIVEIGPSDTLGGMARRTLQS   63 (1878)
T ss_dssp             HHHHHHGGGGSCCCHHHHHHHHHTT-SCC--SEEECCSSSCTTHHHHHHHHHH
T ss_pred             HHHHHHHHhhCcchhhhHHHHHccC-cCc--eEEEEECCcHHHHHHHHHHHHh
Confidence            4689999999999999999998853 366  7779999999999999998865

>2uva_G Fatty acid synthase beta subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; HET: FMN; 3.10A {Thermomyces lanuginosus} PDB: 2uvc_G*

Probab=97.42  E-value=2.2e-05  Score=74.20  Aligned_cols=59  Identities=19%  Similarity=0.165  Sum_probs=50.0

Q ss_pred             CccchHHHHHHHhcC------CCCCCCccEEeCCCCccccccccchhhhcccccCCHHHHHhHHHHhhcCCcCHHHHHHH
Q psy13429          1 MVPAVEPFALALKKA------TINDMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDANHIRRQLPKQIYKPVCWEQTLHI   74 (116)
Q Consensus         1 M~pa~~~~~~~l~~~------~~~~p~ipviSnv~g~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ql~~PV~w~~~i~~   74 (116)
                      |+|++++|+++|+++      .++.|.+|++||++|+++.               ...+.++.|.+|+.+| +|.++|+.
T Consensus      1992 m~~~~~~f~~~L~~~i~~~~i~~~~~~~p~isnvtg~~~~---------------~~~~~~~~l~~~~~sp-~~~~~l~~ 2055 (2060)
T 2uva_G         1992 LRSGVKPFRSFLLKKINKTTIDPSKLIGKYIPNVTAKPFE---------------ISKEYFEEVHRLTGSP-KIANILAN 2055 (2060)
T ss_dssp             GGTTHHHHHHHHHHHCCGGGCCHHHHTTTEECSSSCSCCC---------------CSTTHHHHHHHHSCCH-HHHHHHHS
T ss_pred             HHHHHHHHHHHHHhhcccccCCCCCCCceEEECCCCcccc---------------CCHHHHHHHHHhhCCC-cHHHHHHH
Confidence            789999999999884      6777999999999999998               4556777888888766 99999976


Q ss_pred             H
Q psy13429         75 L   75 (116)
Q Consensus        75 l   75 (116)
                      +
T Consensus      2056 ~ 2056 (2060)
T 2uva_G         2056 W 2056 (2060)
T ss_dssp             G
T ss_pred             H
Confidence            4

>2uv8_G Fatty acid synthase subunit beta (FAS1); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_G* 3hmj_G*

Probab=97.31  E-value=4.3e-05  Score=72.30  Aligned_cols=60  Identities=13%  Similarity=0.121  Sum_probs=49.9

Q ss_pred             CccchHHHHHHHhcC------CCCCCCccEEeCCCCccccccccchhhhcccccCCHHHHHhHHHHhhcCCcCHHHHHHH
Q psy13429          1 MVPAVEPFALALKKA------TINDMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDANHIRRQLPKQIYKPVCWEQTLHI   74 (116)
Q Consensus         1 M~pa~~~~~~~l~~~------~~~~p~ipviSnv~g~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ql~~PV~w~~~i~~   74 (116)
                      |+|++++|+++|+++      .++.|.+|++||++|+++.               ...+..+.+.+|+.+ ++|.++|+.
T Consensus      1981 m~p~~~~f~~~L~~~i~~~~i~~~~~~~p~iSnvtg~~~~---------------~~~~~~~~l~~~~~s-p~~~~~l~~ 2044 (2051)
T 2uv8_G         1981 LMNGVKPFKSFLKKNIIKENVKVARLAGKYIPNLTAKPFQ---------------VTKEYFQDVYDLTGS-EPIKEIIDN 2044 (2051)
T ss_dssp             GSTTSTTHHHHHHTTSCGGGCCHHHHTTTEECSSSCSCCC---------------CSHHHHHHHHHHHCC-HHHHHHHHT
T ss_pred             HHHHHHHHHHHHHhhcccccCCCCCCCCeEEECCCCceec---------------CCHHHHHHHHHhhCC-CcHHHHHHH
Confidence            789999999999984      5667889999999999998               556677888888755 599999976


Q ss_pred             HH
Q psy13429         75 LY   76 (116)
Q Consensus        75 l~   76 (116)
                      +.
T Consensus      2045 ~~ 2046 (2051)
T 2uv8_G         2045 WE 2046 (2051)
T ss_dssp             TT
T ss_pred             HH
Confidence            43

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	116
d1mlaa1	235	c.19.1.1 (A:3-127,A:198-307) Catalytic domain of m	8e-11

>d1mlaa1 c.19.1.1 (A:3-127,A:198-307) Catalytic domain of malonyl-CoA ACP transacylase FabD {Escherichia coli [TaxId: 562]} Length = 235

class: Alpha and beta proteins (a/b)
fold: FabD/lysophospholipase-like
superfamily: FabD/lysophospholipase-like
family: FabD-like
domain: Catalytic domain of malonyl-CoA ACP transacylase FabD
species: Escherichia coli [TaxId: 562]

 Score = 54.8 bits (131), Expect = 8e-11
 Identities = 31/115 (26%), Positives = 47/115 (40%), Gaps = 19/115 (16%)

Query: 1   MVPAVEPFALALKKATINDMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDANHIRRQLPK 60
           M PA +  A+ L K T N   +PV +NVD K                  + + IR  L +
Sbjct: 133 MKPAADKLAVELAKITFNAPTVPVVNNVDVKCET---------------NGDAIRDALVR 177

Query: 61  QIYKPVCWEQTLHILYERPQGNHFPRTFECGPGKSLVTILNQVNKKAGDSAAKVP 115
           Q+Y PV W +++  +            +E GPGK L  +  ++      SA   P
Sbjct: 178 QLYNPVQWTKSVEYMAA----QGVEHLYEVGPGKVLTGLTKRIVDTLTASALNEP 228

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	116
d1mlaa1	235	Catalytic domain of malonyl-CoA ACP transacylase F	99.89
d1nm2a1	253	Catalytic domain of malonyl-CoA ACP transacylase F	99.88

>d1mlaa1 c.19.1.1 (A:3-127,A:198-307) Catalytic domain of malonyl-CoA ACP transacylase FabD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FabD/lysophospholipase-like
superfamily: FabD/lysophospholipase-like
family: FabD-like
domain: Catalytic domain of malonyl-CoA ACP transacylase FabD
species: Escherichia coli [TaxId: 562]

Probab=99.89  E-value=4.3e-24  Score=160.02  Aligned_cols=92  Identities=34%  Similarity=0.571  Sum_probs=85.2

Q ss_pred             CccchHHHHHHHhcCCCCCCCccEEeCCCCccccccccchhhhcccccCCHHHHHhHHHHhhcCCcCHHHHHHHHHhCCC
Q psy13429          1 MVPAVEPFALALKKATINDMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDANHIRRQLPKQIYKPVCWEQTLHILYERPQ   80 (116)
Q Consensus         1 M~pa~~~~~~~l~~~~~~~p~ipviSnv~g~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ql~~PV~w~~~i~~l~~~~~   80 (116)
                      |+|+.++|++.|++++|+.|++|++||++|+++.               +.+.++++|.+|+++||+|.++|+.|.+.  
T Consensus       133 m~~~~~~~~~~l~~v~~~~p~~pviS~~tg~~~~---------------~~~~~~~~l~~ql~~pV~f~~~i~~l~~~--  195 (235)
T d1mlaa1         133 MKPAADKLAVELAKITFNAPTVPVVNNVDVKCET---------------NGDAIRDALVRQLYNPVQWTKSVEYMAAQ--  195 (235)
T ss_dssp             GHHHHHHHHHHHHTSCCCCCSSCBBCTTTCCBCC---------------SHHHHHHHHHHHHHSCEEHHHHHHHHHHT--
T ss_pred             hhhhHHHHHHHHhcCCCCCCcceEEeCCCCCCCC---------------CHHHHHHHHHHhccCCccHHHHHHHHHHC--
Confidence            7899999999999999999999999999999998               88899999999999999999999999998  


Q ss_pred             CCccCcEEEeCCCHHHHHHHHHHhhhcCCCc
Q psy13429         81 GNHFPRTFECGPGKSLVTILNQVNKKAGDSA  111 (116)
Q Consensus        81 g~~f~~~iEiGPg~~L~~l~k~~~~~~~~~~  111 (116)
                      |+  +.|||+|||++|++|+|++.++....+
T Consensus       196 g~--~~fiEiGP~~~Lt~l~~~i~~~~~~~~  224 (235)
T d1mlaa1         196 GV--EHLYEVGPGKVLTGLTKRIVDTLTASA  224 (235)
T ss_dssp             TC--CEEEECSSSSHHHHHHHHHCTTCEEEE
T ss_pred             CC--CEEEEeCCcHHHHHHHHHHcCCCCcee
Confidence            88  556999999999999999988764433

>d1nm2a1 c.19.1.1 (A:0-133,A:196-314) Catalytic domain of malonyl-CoA ACP transacylase FabD {Streptomyces coelicolor A3(2) [TaxId: 100226]}

class: Alpha and beta proteins (a/b)
fold: FabD/lysophospholipase-like
superfamily: FabD/lysophospholipase-like
family: FabD-like
domain: Catalytic domain of malonyl-CoA ACP transacylase FabD
species: Streptomyces coelicolor A3(2) [TaxId: 100226]

Probab=99.88  E-value=1.8e-23  Score=158.30  Aligned_cols=89  Identities=27%  Similarity=0.371  Sum_probs=84.0

Q ss_pred             CccchHHHHHHHhcCCCCCCCccEEeCCCCccccccccchhhhcccccCCHHHHHhHHHHhhcCCcCHHHHHHHHHhCCC
Q psy13429          1 MVPAVEPFALALKKATINDMIIPVHSNVDGKIYRGENKEVSLSVSSLFRDANHIRRQLPKQIYKPVCWEQTLHILYERPQ   80 (116)
Q Consensus         1 M~pa~~~~~~~l~~~~~~~p~ipviSnv~g~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ql~~PV~w~~~i~~l~~~~~   80 (116)
                      |+|++++|++.|++++|++|++|++||++|+++.               +++.+++||.+|+++||+|.++++.|.+.  
T Consensus       144 m~~~~~~~~~~l~~~~~~~p~~p~~S~~~g~~~~---------------~~~~~~~~l~~ql~~pV~f~~~i~~l~~~--  206 (253)
T d1nm2a1         144 MAPAVDKLAEAAKALTPADPKVTYVSNKDGRAVA---------------SGTEVLDRLVGQVANPVRWDLCMETFKEL--  206 (253)
T ss_dssp             GHHHHHHHHHHHTTCCCCCCSSEEBCTTTSCBCC---------------CHHHHHHHHHHHTTSCEEHHHHHHHHHHT--
T ss_pred             HhhhHHHHHHHHHhhhccccccccccccccchhh---------------hcchhHhhhhhhhcccccHHHHHHHHHHC--
Confidence            7899999999999999999999999999999998               89999999999999999999999999998  


Q ss_pred             CCccCcEEEeCCCHHHHHHHHHHhhhcC
Q psy13429         81 GNHFPRTFECGPGKSLVTILNQVNKKAG  108 (116)
Q Consensus        81 g~~f~~~iEiGPg~~L~~l~k~~~~~~~  108 (116)
                      |+  +.|||+|||++|++++|++.++..
T Consensus       207 gv--~~fvEiGP~~~Ls~l~k~~~~~~~  232 (253)
T d1nm2a1         207 GV--TAIIEVCPGGTLTGLAKRALPGVK  232 (253)
T ss_dssp             TC--CEEEECSSCSHHHHHHHHHSTTCE
T ss_pred             CC--CEEEEeCCcHHHHHHHHHHcCCCC
Confidence            88  566999999999999999987654