Psyllid ID: psy14005

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220------
MKKKKKKQERSELKPDESYPHDLSGNINRVHLIPFVDFQVPAENFDSVTIYFSDIVGFTNISADSSPMEVVNMLNTLYKLFDSRIRKYDVYKVETIGDAYMVVSGLPQRNGKSPGTAISFYIRNIGSFGGLGTKGFFRPFSGTLHVGEIATMSLDLLVGIEHFKIPHRPNDKLEIRVGINTGPCVAGVVGTTMPRYCLFGDTINTASRMESAGDLPSFFIVTIVMR
cHHHHHHHHHHHHHHHHcccHHHHHHHHcccccccccccccccccccEEEEEEccccHHHHHccccHHHHHHHHHHHHHHHHHHHHccccEEEEEEccEEEEEcccccccccccccHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHHHHHccccccccccEEEEEcccccccccccccccccccccccHHHHHHHHHHcccccccEEEEccccc
cHHHHHHHHHHHHHHHHHccHHHHHHHHccccccccccccccccccEEEEEEcccHcHHHHHcccccHHHHHHHHHHHHHHHHHHHcccEEEEEEEccEEEEEccccccccccccccHHHHHHHHccccccEEcccccccccHHHHHHHHHHHHHHHHHHcccEEcccccccEEEEEEEccccEEEEEEccccccEEEccccccccHHcccccccEEEEEcccccc
mkkkkkkqerselkpdesyphdlsgninrvhlipfvdfqvpaenfdsvtiyFSDIVgftnisadsspMEVVNMLNTLYKLFDSrirkydvykvetIGDAYMVvsglpqrngkspgtAISFYIRNigsfgglgtkgffrpfsgtlhvgEIATMSLDLLVGIehfkiphrpndkleirvgintgpcvagvvgttmpryclfgdtintasrmesagdlpsFFIVTIVMR
mkkkkkkqerselkpdesyphdlsGNINRVHLIPFVDFQVPAENFDSVTIYFSDIVGFTNISADSSPMEVVNMLNTLYKLFDSRIRKYDVYKVETIGDAYMVVSGLPQRNGKSPGTAISFYIRNIGSFGGLGTKGFFRPFSGTLHVGEIATMSLDLLVGIEHFKIPHRPNDKLEIRVGINTGPCVAGVVGTTMPRYCLFGDTINTasrmesagdlpsffIVTIVMR
MkkkkkkQERSELKPDESYPHDLSGNINRVHLIPFVDFQVPAENFDSVTIYFSDIVGFTNISADSSPMEVVNMLNTLYKLFDSRIRKYDVYKVETIGDAYMVVSGLPQRNGKSPGTAISFYIRNIGSFGGLGTKGFFRPFSGTLHVGEIATMSLDLLVGIEHFKIPHRPNDKLEIRVGINTGPCVAGVVGTTMPRYCLFGDTINTASRMESAGDLPSFFIVTIVMR
************************GNINRVHLIPFVDFQVPAENFDSVTIYFSDIVGFTNISADSSPMEVVNMLNTLYKLFDSRIRKYDVYKVETIGDAYMVVSGLPQRNGKSPGTAISFYIRNIGSFGGLGTKGFFRPFSGTLHVGEIATMSLDLLVGIEHFKIPHRPNDKLEIRVGINTGPCVAGVVGTTMPRYCLFGDTINTASRMESAGDLPSFFIVTIV**
**KKK*KQERSELKPDESYPHDLSGNINRVHLIPFVDFQVPAENFDSVTIYFSDIVGFTNISADSSPMEVVNMLNTLYKLFDSRIRKYDVYKVETIGDAYMVVSGLPQRNGKSPGTAISFYIRNIGSFGGLGTKGFFRPFSGTLHVGEIATMSLDLLVGIEHFKIPHRPNDKLEIRVGINTGPCVAGVVGTTMPRYCLFGDTINTASRMESAGDLPSFFIV*****
******************YPHDLSGNINRVHLIPFVDFQVPAENFDSVTIYFSDIVGFTNISADSSPMEVVNMLNTLYKLFDSRIRKYDVYKVETIGDAYMVVSGLPQRNGKSPGTAISFYIRNIGSFGGLGTKGFFRPFSGTLHVGEIATMSLDLLVGIEHFKIPHRPNDKLEIRVGINTGPCVAGVVGTTMPRYCLFGDTINTASRMESAGDLPSFFIVTIVMR
MKKKKKKQERSELKPDESYPHDLSGNINRVHLIPFVDFQVPAENFDSVTIYFSDIVGFTNISADSSPMEVVNMLNTLYKLFDSRIRKYDVYKVETIGDAYMVVSGLPQRNGKSPGTAISFYIRNIGSFGGLGTKGFFRPFSGTLHVGEIATMSLDLLVGIEHFKIPHRPNDKLEIRVGINTGPCVAGVVGTTMPRYCLFGDTINTASRMESAGDLPSF*IVTI***
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oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MKKKKKKQERSELKPDESYPHDLSGNINRVHLIPFVDFQVPAENFDSVTIYFSDIVGFTNISADSSPMEVVNMLNTLYKLFDSRIRKYDVYKVETIGDAYMVVSGLPQRNGKSPGTAISFYIRNIGSFGGLGTKGFFRPFSGTLHVGEIATMSLDLLVGIEHFKIPHRPNDKLEIRVGINTGPCVAGVVGTTMPRYCLFGDTINTASRMESAGDLPSFFIVTIVMR
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query226 2.2.26 [Sep-21-2011]
P160661061 Atrial natriuretic peptid yes N/A 0.694 0.147 0.517 5e-50
P189101057 Atrial natriuretic peptid yes N/A 0.694 0.148 0.517 5e-50
P182931057 Atrial natriuretic peptid yes N/A 0.694 0.148 0.517 6e-50
P461971047 Atrial natriuretic peptid no N/A 0.690 0.148 0.520 8e-50
Q6VVW51047 Atrial natriuretic peptid no N/A 0.690 0.148 0.520 9e-50
P160671047 Atrial natriuretic peptid no N/A 0.690 0.148 0.520 1e-49
P205941047 Atrial natriuretic peptid no N/A 0.756 0.163 0.488 1e-48
P518401108 Guanylyl cyclase GC-E OS= no N/A 0.641 0.130 0.553 1e-48
Q028461103 Retinal guanylyl cyclase no N/A 0.641 0.131 0.553 2e-48
P552021050 Atrial natriuretic peptid N/A N/A 0.694 0.149 0.528 2e-48
>sp|P16066|ANPRA_HUMAN Atrial natriuretic peptide receptor 1 OS=Homo sapiens GN=NPR1 PE=1 SV=1 Back     alignment and function desciption
 Score =  197 bits (501), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 101/195 (51%), Positives = 123/195 (63%), Gaps = 38/195 (19%)

Query: 20   PHDLSGNINRVHLIPFVDFQVPAENFDSVTIYFSDIVGFTNISADSSPMEVVNMLNTLYK 79
            PH ++  + R          V AE FDSVTIYFSDIVGFT +SA+S+PM+VV +LN LY 
Sbjct: 854  PHSVAEQLKRGE-------TVQAEAFDSVTIYFSDIVGFTALSAESTPMQVVTLLNDLYT 906

Query: 80   LFDSRIRKYDVYKVETIGDAYMVVSGLPQRNGKSPGTAISFYIRNIGSFGGLGTKGFFRP 139
             FD+ I  +DVYKVETIGDAYMVVSGLP RNG+                           
Sbjct: 907  CFDAVIDNFDVYKVETIGDAYMVVSGLPVRNGR--------------------------- 939

Query: 140  FSGTLHVGEIATMSLDLLVGIEHFKIPHRPNDKLEIRVGINTGPCVAGVVGTTMPRYCLF 199
                LH  E+A M+L LL  +  F+I HRP ++L +R+GI+TGP  AGVVG  MPRYCLF
Sbjct: 940  ----LHACEVARMALALLDAVRSFRIRHRPQEQLRLRIGIHTGPVCAGVVGLKMPRYCLF 995

Query: 200  GDTINTASRMESAGD 214
            GDT+NTASRMES G+
Sbjct: 996  GDTVNTASRMESNGE 1010
Receptor for the atrial natriuretic peptide NPPA/ANP and the brain natriuretic peptide NPPB/BNP which are potent vasoactive hormones playing a key role in cardiovascular homeostasis. Has guanylate cyclase activity upon binding of the ligand.
Homo sapiens (taxid: 9606)
EC: 4EC: .EC: 6EC: .EC: 1EC: .EC: 2
>sp|P18910|ANPRA_RAT Atrial natriuretic peptide receptor 1 OS=Rattus norvegicus GN=Npr1 PE=1 SV=1 Back     alignment and function description
>sp|P18293|ANPRA_MOUSE Atrial natriuretic peptide receptor 1 OS=Mus musculus GN=Npr1 PE=2 SV=2 Back     alignment and function description
>sp|P46197|ANPRB_BOVIN Atrial natriuretic peptide receptor 2 OS=Bos taurus GN=NPR2 PE=2 SV=1 Back     alignment and function description
>sp|Q6VVW5|ANPRB_MOUSE Atrial natriuretic peptide receptor 2 OS=Mus musculus GN=Npr2 PE=2 SV=2 Back     alignment and function description
>sp|P16067|ANPRB_RAT Atrial natriuretic peptide receptor 2 OS=Rattus norvegicus GN=Npr2 PE=1 SV=1 Back     alignment and function description
>sp|P20594|ANPRB_HUMAN Atrial natriuretic peptide receptor 2 OS=Homo sapiens GN=NPR2 PE=1 SV=1 Back     alignment and function description
>sp|P51840|GUC2E_RAT Guanylyl cyclase GC-E OS=Rattus norvegicus GN=Gucy2e PE=1 SV=1 Back     alignment and function description
>sp|Q02846|GUC2D_HUMAN Retinal guanylyl cyclase 1 OS=Homo sapiens GN=GUCY2D PE=1 SV=2 Back     alignment and function description
>sp|P55202|ANPRB_ANGJA Atrial natriuretic peptide receptor 2 OS=Anguilla japonica GN=npr2 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query226
321468756 403 hypothetical protein DAPPUDRAFT_51873 [D 0.641 0.359 0.642 1e-59
347972121 720 AGAP004555-PA [Anopheles gambiae str. PE 0.641 0.201 0.681 6e-59
312377318 712 hypothetical protein AND_11409 [Anophele 0.672 0.213 0.661 4e-58
157107806 574 guanylate cyclase [Aedes aegypti] gi|108 0.641 0.252 0.670 6e-58
357613839 333 guanylate cyclase [Danaus plexippus] 0.637 0.432 0.617 2e-55
170037925 694 guanylate cyclase [Culex quinquefasciatu 0.641 0.208 0.598 2e-53
291227131 1039 PREDICTED: natriuretic peptide receptor 0.690 0.150 0.577 6e-52
156364479 518 predicted protein [Nematostella vectensi 0.641 0.279 0.585 4e-51
291227133 1015 PREDICTED: Natriuretic peptide receptor 0.646 0.143 0.593 4e-51
326932572 697 PREDICTED: hypothetical protein LOC10054 0.628 0.203 0.578 2e-50
>gi|321468756|gb|EFX79739.1| hypothetical protein DAPPUDRAFT_51873 [Daphnia pulex] Back     alignment and taxonomy information
 Score =  235 bits (599), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 113/176 (64%), Positives = 129/176 (73%), Gaps = 31/176 (17%)

Query: 39  QVPAENFDSVTIYFSDIVGFTNISADSSPMEVVNMLNTLYKLFDSRIRKYDVYKVETIGD 98
           QVPAE+FDSVTIYFSDIVGFT ISA S+P+E++  LN LYK+FDS++ +YDVYKVETIGD
Sbjct: 232 QVPAESFDSVTIYFSDIVGFTAISASSTPLEIIAFLNALYKMFDSKLERYDVYKVETIGD 291

Query: 99  AYMVVSGLPQRNGKSPGTAISFYIRNIGSFGGLGTKGFFRPFSGTLHVGEIATMSLDLLV 158
           AYMVVSGLP RNG                                 HVGEIATMSLDL+ 
Sbjct: 292 AYMVVSGLPHRNGLK-------------------------------HVGEIATMSLDLIA 320

Query: 159 GIEHFKIPHRPNDKLEIRVGINTGPCVAGVVGTTMPRYCLFGDTINTASRMESAGD 214
           G+++FKIPHRPN  + IR+G NTGPCVAGVVGT MPRYCLFGDTINTASRMES G+
Sbjct: 321 GVKNFKIPHRPNQSVSIRIGFNTGPCVAGVVGTKMPRYCLFGDTINTASRMESTGE 376

Source: Daphnia pulex

Species: Daphnia pulex

Genus: Daphnia

Family: Daphniidae

Order: Diplostraca

Class: Branchiopoda

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|347972121|ref|XP_313853.4| AGAP004555-PA [Anopheles gambiae str. PEST] gi|333469181|gb|EAA09176.4| AGAP004555-PA [Anopheles gambiae str. PEST] Back     alignment and taxonomy information
>gi|312377318|gb|EFR24176.1| hypothetical protein AND_11409 [Anopheles darlingi] Back     alignment and taxonomy information
>gi|157107806|ref|XP_001649945.1| guanylate cyclase [Aedes aegypti] gi|108879466|gb|EAT43691.1| AAEL004883-PA [Aedes aegypti] Back     alignment and taxonomy information
>gi|357613839|gb|EHJ68742.1| guanylate cyclase [Danaus plexippus] Back     alignment and taxonomy information
>gi|170037925|ref|XP_001846805.1| guanylate cyclase [Culex quinquefasciatus] gi|167881247|gb|EDS44630.1| guanylate cyclase [Culex quinquefasciatus] Back     alignment and taxonomy information
>gi|291227131|ref|XP_002733542.1| PREDICTED: natriuretic peptide receptor 1-like [Saccoglossus kowalevskii] Back     alignment and taxonomy information
>gi|156364479|ref|XP_001626375.1| predicted protein [Nematostella vectensis] gi|156213249|gb|EDO34275.1| predicted protein [Nematostella vectensis] Back     alignment and taxonomy information
>gi|291227133|ref|XP_002733543.1| PREDICTED: Natriuretic peptide receptor A/guanylate cyclase A (atrionatriuretic peptide receptor A)-like [Saccoglossus kowalevskii] Back     alignment and taxonomy information
>gi|326932572|ref|XP_003212389.1| PREDICTED: hypothetical protein LOC100545236 [Meleagris gallopavo] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query226
UNIPROTKB|B0ZBF1255 NPR1 "Atrial natriuretic pepti 0.323 0.286 0.739 7.7e-48
UNIPROTKB|G3N2S3421 NPR2 "Guanylate cyclase" [Bos 0.323 0.173 0.739 3.8e-47
UNIPROTKB|Q028461103 GUCY2D "Retinal guanylyl cycla 0.353 0.072 0.662 4.4e-47
FB|FBgn0051183 1417 CG31183 [Drosophila melanogast 0.353 0.056 0.687 9.5e-47
FB|FBgn0053958710 CG33958 [Drosophila melanogast 0.323 0.102 0.698 2.8e-46
UNIPROTKB|F1NDQ81037 GUCY2F "Guanylate cyclase" [Ga 0.353 0.077 0.675 3.4e-46
ZFIN|ZDB-GENE-100805-41070 npr1b "natriuretic peptide rec 0.353 0.074 0.7 3.5e-46
RGD|6204381108 Gucy2d "guanylate cyclase 2D, 0.353 0.072 0.662 3.9e-46
MGI|MGI:1051231108 Gucy2e "guanylate cyclase 2e" 0.353 0.072 0.662 3.9e-46
ZFIN|ZDB-GENE-060503-5391067 npr1a "natriuretic peptide rec 0.323 0.068 0.767 4.5e-46
UNIPROTKB|B0ZBF1 NPR1 "Atrial natriuretic peptide receptor 1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
 Score = 273 (101.2 bits), Expect = 7.7e-48, Sum P(2) = 7.7e-48
 Identities = 54/73 (73%), Positives = 62/73 (84%)

Query:    40 VPAENFDSVTIYFSDIVGFTNISADSSPMEVVNMLNTLYKLFDSRIRKYDVYKVETIGDA 99
             V AE FDSVTIYFSDIVGFT +SA+S+PM+VV +LN LY  FD+ I  +DVYKVETIGDA
Sbjct:    48 VQAEAFDSVTIYFSDIVGFTALSAESTPMQVVTLLNDLYTCFDAVIDNFDVYKVETIGDA 107

Query:   100 YMVVSGLPQRNGK 112
             YMVVSGLP RNG+
Sbjct:   108 YMVVSGLPVRNGR 120
GO:0016849 "phosphorus-oxygen lyase activity" evidence=IEA
GO:0009190 "cyclic nucleotide biosynthetic process" evidence=IEA
GO:0035556 "intracellular signal transduction" evidence=IEA
GO:0000166 "nucleotide binding" evidence=IEA
UNIPROTKB|G3N2S3 NPR2 "Guanylate cyclase" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|Q02846 GUCY2D "Retinal guanylyl cyclase 1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
FB|FBgn0051183 CG31183 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
FB|FBgn0053958 CG33958 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
UNIPROTKB|F1NDQ8 GUCY2F "Guanylate cyclase" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-100805-4 npr1b "natriuretic peptide receptor 1b" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
RGD|620438 Gucy2d "guanylate cyclase 2D, membrane (retina-specific)" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
MGI|MGI:105123 Gucy2e "guanylate cyclase 2e" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-060503-539 npr1a "natriuretic peptide receptor 1a" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P18293ANPRA_MOUSE4, ., 6, ., 1, ., 20.51790.69460.1485yesN/A
P16066ANPRA_HUMAN4, ., 6, ., 1, ., 20.51790.69460.1479yesN/A
P18910ANPRA_RAT4, ., 6, ., 1, ., 20.51790.69460.1485yesN/A

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
4th Layer4.6.1.2LOW CONFIDENCE prediction!
3rd Layer4.6.10.691

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query226
smart00044194 smart00044, CYCc, Adenylyl- / guanylyl cyclase, ca 1e-67
pfam00211184 pfam00211, Guanylate_cyc, Adenylate and Guanylate 1e-60
cd07302177 cd07302, CHD, cyclase homology domain 2e-49
cd07556133 cd07556, Nucleotidyl_cyc_III, Class III nucleotidy 3e-31
COG2114227 COG2114, CyaA, Adenylate cyclase, family 3 (some p 9e-19
>gnl|CDD|214485 smart00044, CYCc, Adenylyl- / guanylyl cyclase, catalytic domain Back     alignment and domain information 
 Score =  205 bits (525), Expect = 1e-67
 Identities = 83/175 (47%), Positives = 107/175 (61%), Gaps = 32/175 (18%)

Query: 40  VPAENFDSVTIYFSDIVGFTNISADSSPMEVVNMLNTLYKLFDSRIRKYDVYKVETIGDA 99
           VPAE++D+VTI FSDIVGFT++ + S+P +VVN+LN LY  FD  I ++  YKV+TIGDA
Sbjct: 29  VPAESYDNVTILFSDIVGFTSLCSTSTPEQVVNLLNDLYSRFDQIIDRHGGYKVKTIGDA 88

Query: 100 YMVVSGLPQRNGKSPGTAISFYIRNIGSFGGLGTKGFFRPFSGTLHVGEIATMSLDLLVG 159
           YMV SGLP+                                    H   IA  +LD++  
Sbjct: 89  YMVASGLPEEALV-------------------------------DHAELIADEALDMVEE 117

Query: 160 IEHFKIPHRPNDKLEIRVGINTGPCVAGVVGTTMPRYCLFGDTINTASRMESAGD 214
           ++   + HR  + L +R+GI+TGP VAGVVG  MPRYCLFGDT+N ASRMESAGD
Sbjct: 118 LKTVLVQHR-EEGLRVRIGIHTGPVVAGVVGIRMPRYCLFGDTVNLASRMESAGD 171

Present in two copies in mammalian adenylyl cyclases. Eubacterial homologues are known. Two residues (Asn, Arg) are thought to be involved in catalysis. These cyclases have important roles in a diverse range of cellular processes. Length = 194
>gnl|CDD|201086 pfam00211, Guanylate_cyc, Adenylate and Guanylate cyclase catalytic domain Back     alignment and domain information
>gnl|CDD|143636 cd07302, CHD, cyclase homology domain Back     alignment and domain information
>gnl|CDD|143637 cd07556, Nucleotidyl_cyc_III, Class III nucleotidyl cyclases Back     alignment and domain information
>gnl|CDD|225025 COG2114, CyaA, Adenylate cyclase, family 3 (some proteins contain HAMP domain) [Signal transduction mechanisms] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 226
smart00044194 CYCc Adenylyl- / guanylyl cyclase, catalytic domai 100.0
PF00211184 Guanylate_cyc: Adenylate and Guanylate cyclase cat 100.0
KOG4171|consensus671 100.0
COG2114227 CyaA Adenylate cyclase, family 3 (some proteins co 99.97
cd07302177 CHD cyclase homology domain. Catalytic domains of 99.97
KOG3619|consensus867 99.95
KOG3619|consensus 867 99.94
KOG1023|consensus484 99.92
KOG3618|consensus 1318 99.92
KOG3618|consensus1318 99.87
cd07556133 Nucleotidyl_cyc_III Class III nucleotidyl cyclases 99.55
PF05165246 GGDN: GGDN family; InterPro: IPR007839 GTP cyclohy 97.3
COG2429250 Archaeal GTP cyclohydrolase III [Nucleotide transp 96.55
PRK10245366 adrA diguanylate cyclase AdrA; Provisional 96.42
COG2199181 c-di-GMP synthetase (diguanylate cyclase, GGDEF do 96.16
PF00990161 GGDEF: GGDEF domain; InterPro: IPR000160 This doma 96.14
smart00267163 GGDEF diguanylate cyclase. Diguanylate cyclase, pr 96.03
cd01949158 GGDEF Diguanylate-cyclase (DGC) or GGDEF domain. D 95.27
PRK02240254 GTP cyclohydrolase III; Provisional 95.07
PRK09894296 diguanylate cyclase; Provisional 94.96
TIGR00254165 GGDEF diguanylate cyclase (GGDEF) domain. The GGDE 94.85
PRK11059 640 regulatory protein CsrD; Provisional 94.66
COG3706435 PleD Response regulator containing a CheY-like rec 94.56
PRK02240254 GTP cyclohydrolase III; Provisional 94.48
TIGR02577482 cas_TM1794_Crm2 CRISPR-associated protein, Crm2 fa 94.44
PF10851116 DUF2652: Protein of unknown function (DUF2652) ; I 93.99
PRK09966407 putative inner membrane diguanylate cyclase; Provi 93.16
PRK15426570 putative diguanylate cyclase YedQ; Provisional 92.99
PRK14538 838 putative bifunctional signaling protein/50S riboso 92.49
PRK13561 651 putative diguanylate cyclase; Provisional 91.52
PRK11829 660 biofilm formation regulator HmsP; Provisional 90.52
COG3887 655 Predicted signaling protein consisting of a modifi 90.51
PRK10060 663 RNase II stability modulator; Provisional 90.26
TIGR02578648 cas_TM1811_Csm1 CRISPR-associated protein, Csm1 fa 89.14
PRK09776 1092 putative diguanylate cyclase; Provisional 88.21
PRK11359 799 cyclic-di-GMP phosphodiesterase; Provisional 87.51
PF05165246 GGDN: GGDN family; InterPro: IPR007839 GTP cyclohy 83.16
>smart00044 CYCc Adenylyl- / guanylyl cyclase, catalytic domain Back     alignment and domain information 
Probab=100.00  E-value=2.8e-33  Score=225.48  Aligned_cols=172  Identities=47%  Similarity=0.742  Sum_probs=149.6

Q ss_pred             hhhccccccccccc--cc-ccCCcccCcEEEEEEecCCchhhcCCCCHHHHHHHHHHHHHHHHHHHHhcCcEEEeEeCcE
Q psy14005         23 LSGNINRVHLIPFV--DF-QVPAENFDSVTIYFSDIVGFTNISADSSPMEVVNMLNTLYKLFDSRIRKYDVYKVETIGDA   99 (226)
Q Consensus        23 l~~~~~~~~~~~~~--~~-~~~~~~~~~vtvlf~di~~ft~l~~~~~~~~~~~~l~~~~~~~~~~i~~~gG~i~k~~GD~   99 (226)
                      ++..++|.++.+.+  +. .....++++++|||+||+|||.+++..+++++..+++.|+..+.+++++|||++.++.||+
T Consensus         9 ll~~~lP~~v~~~l~~g~~~~~~~~~~~~tvlf~di~g~t~l~~~~~~~~~~~~l~~~~~~~~~~i~~~gg~v~~~~Gd~   88 (194)
T smart00044        9 LLDQLLPASVAESLKRGGSPVPAESYDNVTILFTDIVGFTTLSSEATPEQVVTLLNDLYSRFDRIIDRHGGYKVKTIGDA   88 (194)
T ss_pred             HHHHhCCHHHHHHHHhCCCCccccccCeEEEEEeEhhhhhhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeCCE
Confidence            34444444444433  22 3456778999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEeCCCCCCCCCCCcchhhhhhccCCCCCCCCCCccCCCCccchHHHHHHHHHHHHHHhhhccCCCCCCCceeEEEee
Q psy14005        100 YMVVSGLPQRNGKSPGTAISFYIRNIGSFGGLGTKGFFRPFSGTLHVGEIATMSLDLLVGIEHFKIPHRPNDKLEIRVGI  179 (226)
Q Consensus       100 ~la~fg~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~i~~~~~~~~~~~~~~~~l~~riGi  179 (226)
                      +|++||.+....                               .+++.+|+.+|++++..+..++... ...++++||||
T Consensus        89 ~l~~F~~~~~~~-------------------------------~~~a~~a~~~al~l~~~~~~~~~~~-~~~~l~~riGi  136 (194)
T smart00044       89 YMVVSGLPTEAL-------------------------------VDHAELAADEALDMVESLKTVLSQH-RGNGLRVRIGI  136 (194)
T ss_pred             EEEEECCCCCcc-------------------------------hHHHHHHHHHHHHHHHHHHHHHhhc-cCCCeeEEEEE
Confidence            999999987763                               2789999999999999998886433 36789999999


Q ss_pred             ecceeEEeeecCCCCceeEeCcHHHHHHHHhhcCCCCcEEEeccccC
Q psy14005        180 NTGPCVAGVVGTTMPRYCLFGDTINTASRMESAGDLPSFFIVTIVMR  226 (226)
Q Consensus       180 ~~G~v~~g~vG~~~~~~~v~G~~Vn~Aarl~~~a~~g~i~vs~~~~~  226 (226)
                      |+|++++|.+|...++|+++|++||.|+||++.+++|+|+||+++|+
T Consensus       137 h~G~v~~~~~g~~~~~~~~~G~~vn~AarL~~~a~~g~i~vs~~~~~  183 (194)
T smart00044      137 HTGPVVAGVVGITMPRYCLFGDTVNLASRMESVGDPGQILVSEETYS  183 (194)
T ss_pred             eccceEEEecCCCCceeEEeChHHHHHHHHHhcCCCCeEEECHHHHH
Confidence            99999999999987789999999999999999999999999999874

Present in two copies in mammalian adenylyl cyclases. Eubacterial homologues are known. Two residues (Asn, Arg) are thought to be involved in catalysis. These cyclases have important roles in a diverse range of cellular processes.
>PF00211 Guanylate_cyc: Adenylate and Guanylate cyclase catalytic domain; InterPro: IPR001054 Guanylate cyclases (4 Back     alignment and domain information
>KOG4171|consensus Back     alignment and domain information
>COG2114 CyaA Adenylate cyclase, family 3 (some proteins contain HAMP domain) [Signal transduction mechanisms] Back     alignment and domain information
>cd07302 CHD cyclase homology domain Back     alignment and domain information
>KOG3619|consensus Back     alignment and domain information
>KOG3619|consensus Back     alignment and domain information
>KOG1023|consensus Back     alignment and domain information
>KOG3618|consensus Back     alignment and domain information
>KOG3618|consensus Back     alignment and domain information
>cd07556 Nucleotidyl_cyc_III Class III nucleotidyl cyclases Back     alignment and domain information
>PF05165 GGDN: GGDN family; InterPro: IPR007839 GTP cyclohydrolase III catalyses the formation of 2-amino-5-formylamino-6- ribofuranosylamino-4(3H)-pyrimidinone ribonucleotide monophosphate and inorganic phosphate from GTP Back     alignment and domain information
>COG2429 Archaeal GTP cyclohydrolase III [Nucleotide transport and metabolism] Back     alignment and domain information
>PRK10245 adrA diguanylate cyclase AdrA; Provisional Back     alignment and domain information
>COG2199 c-di-GMP synthetase (diguanylate cyclase, GGDEF domain) [Signal transduction mechanisms] Back     alignment and domain information
>PF00990 GGDEF: GGDEF domain; InterPro: IPR000160 This domain appears to be ubiquitous in bacteria and is often linked to a regulatory domain, such as a phosphorylation receiver or oxygen sensing domain Back     alignment and domain information
>smart00267 GGDEF diguanylate cyclase Back     alignment and domain information
>cd01949 GGDEF Diguanylate-cyclase (DGC) or GGDEF domain Back     alignment and domain information
>PRK02240 GTP cyclohydrolase III; Provisional Back     alignment and domain information
>PRK09894 diguanylate cyclase; Provisional Back     alignment and domain information
>TIGR00254 GGDEF diguanylate cyclase (GGDEF) domain Back     alignment and domain information
>PRK11059 regulatory protein CsrD; Provisional Back     alignment and domain information
>COG3706 PleD Response regulator containing a CheY-like receiver domain and a GGDEF domain [Signal transduction mechanisms] Back     alignment and domain information
>PRK02240 GTP cyclohydrolase III; Provisional Back     alignment and domain information
>TIGR02577 cas_TM1794_Crm2 CRISPR-associated protein, Crm2 family Back     alignment and domain information
>PF10851 DUF2652: Protein of unknown function (DUF2652) ; InterPro: IPR020503 This entry contains proteins with no known function Back     alignment and domain information
>PRK09966 putative inner membrane diguanylate cyclase; Provisional Back     alignment and domain information
>PRK15426 putative diguanylate cyclase YedQ; Provisional Back     alignment and domain information
>PRK14538 putative bifunctional signaling protein/50S ribosomal protein L9; Provisional Back     alignment and domain information
>PRK13561 putative diguanylate cyclase; Provisional Back     alignment and domain information
>PRK11829 biofilm formation regulator HmsP; Provisional Back     alignment and domain information
>COG3887 Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain [Signal transduction mechanisms] Back     alignment and domain information
>PRK10060 RNase II stability modulator; Provisional Back     alignment and domain information
>TIGR02578 cas_TM1811_Csm1 CRISPR-associated protein, Csm1 family Back     alignment and domain information
>PRK09776 putative diguanylate cyclase; Provisional Back     alignment and domain information
>PRK11359 cyclic-di-GMP phosphodiesterase; Provisional Back     alignment and domain information
>PF05165 GGDN: GGDN family; InterPro: IPR007839 GTP cyclohydrolase III catalyses the formation of 2-amino-5-formylamino-6- ribofuranosylamino-4(3H)-pyrimidinone ribonucleotide monophosphate and inorganic phosphate from GTP Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query226
3et6_B190 The Crystal Structure Of The Catalytic Domain Of A 8e-28
3et6_A190 The Crystal Structure Of The Catalytic Domain Of A 8e-28
3uvj_A225 Crystal Structure Of The Catalytic Domain Of The He 2e-27
1yk9_A204 Crystal Structure Of A Mutant Form Of The Mycobacte 4e-23
2wz1_A219 Structure Of The Catalytic Domain Of Human Soluble 5e-23
3uvj_B220 Crystal Structure Of The Catalytic Domain Of The He 7e-21
1ab8_A220 Rat Type Ii Adenylyl Cyclase C2 DomainFORSKOLIN COM 8e-14
1azs_B212 Complex Of Gs-Alpha With The Catalytic Domains Of M 9e-14
1cul_B208 Complex Of Gs-Alpha With The Catalytic Domains Of M 9e-14
1azs_A220 Complex Of Gs-Alpha With The Catalytic Domains Of M 1e-10
1cs4_A225 Complex Of Gs-Alpha With The Catalytic Domains Of M 1e-10
1cjk_A217 Complex Of Gs-Alpha With The Catalytic Domains Of M 1e-10
1fx4_A231 Structure Analysis Of Adenylate Cyclases From Trypa 1e-07
1fx2_A235 Structural Analysis Of Adenylate Cyclases From Tryp 5e-07
3r5g_A198 Crystal Structure Of The Adenylyl Cyclase Cyab From 1e-06
>pdb|3ET6|B Chain B, The Crystal Structure Of The Catalytic Domain Of A Eukaryotic Guanylate Cyclase Length = 190 Back     alignment and structure 
Iteration: 1

 Score =  120 bits (300), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 71/182 (39%), Positives = 97/182 (53%), Gaps = 35/182 (19%)
Query: 40  VPAENFDSVTIYFSDIVGFTNISADSSPMEVVNMLNTLYKLFDSRIRKY-DVYKVETIGD 98
            PA+     T+ FSDIVGFT I++ SSP+EV ++L+ LY+ FD+ I +Y  +YKVETIGD
Sbjct: 2   APAQEHPEATVLFSDIVGFTEIASRSSPLEVXSLLDELYQRFDAAIEEYPQLYKVETIGD 61
Query: 99  AYMVVSGLPQRNGKSPGTAISFYIRNIGSFGGLGTKGFFRPFSGTLHVGEIATMSLDLLV 158
           AYMVV  +           + F +R                    +H             
Sbjct: 62  AYMVVCNVTVPCDDHADVLLEFALR--------------------MHE------------ 89
Query: 159 GIEHFKIPHRPNDKLEIRVGINTGPCVAGVVGTTMPRYCLFGDTINTASRMESAGDLPSF 218
             E  ++     + + IRVG+++GP VAGVVG  MPR+ LFGDT+NTASRMES G+    
Sbjct: 90  --EASRVASSLGEPVRIRVGMHSGPVVAGVVGRKMPRFXLFGDTVNTASRMESHGEAGQI 147
Query: 219 FI 220
            I
Sbjct: 148 HI 149
>pdb|3ET6|A Chain A, The Crystal Structure Of The Catalytic Domain Of A Eukaryotic Guanylate Cyclase Length = 190 Back     alignment and structure
>pdb|3UVJ|A Chain A, Crystal Structure Of The Catalytic Domain Of The Heterodimeric Human Soluble Guanylate Cyclase 1. Length = 225 Back     alignment and structure
>pdb|1YK9|A Chain A, Crystal Structure Of A Mutant Form Of The Mycobacterial Adenylyl Cyclase Rv1625c Length = 204 Back     alignment and structure
>pdb|2WZ1|A Chain A, Structure Of The Catalytic Domain Of Human Soluble Guanylate Cyclase 1 Beta 3. Length = 219 Back     alignment and structure
>pdb|3UVJ|B Chain B, Crystal Structure Of The Catalytic Domain Of The Heterodimeric Human Soluble Guanylate Cyclase 1. Length = 220 Back     alignment and structure
>pdb|1AB8|A Chain A, Rat Type Ii Adenylyl Cyclase C2 DomainFORSKOLIN COMPLEX Length = 220 Back     alignment and structure
>pdb|1AZS|B Chain B, Complex Of Gs-Alpha With The Catalytic Domains Of Mammalian Adenylyl Cyclase Length = 212 Back     alignment and structure
>pdb|1CUL|B Chain B, Complex Of Gs-Alpha With The Catalytic Domains Of Mammalian Adenylyl Cyclase: Complex With 2',5'-Dideoxy-Adenosine 3'- Triphosphate And Mg Length = 208 Back     alignment and structure
>pdb|1AZS|A Chain A, Complex Of Gs-Alpha With The Catalytic Domains Of Mammalian Adenylyl Cyclase Length = 220 Back     alignment and structure
>pdb|1CS4|A Chain A, Complex Of Gs-Alpha With The Catalytic Domains Of Mammalian Adenylyl Cyclase: Complex With 2'-Deoxy-Adenosine 3'- Monophosphate, Pyrophosphate And Mg Length = 225 Back     alignment and structure
>pdb|1CJK|A Chain A, Complex Of Gs-Alpha With The Catalytic Domains Of Mammalian Adenylyl Cyclase: Complex With Adenosine 5'-(Alpha Thio)-Triphosphate (Rp), Mg, And Mn Length = 217 Back     alignment and structure
>pdb|1FX4|A Chain A, Structure Analysis Of Adenylate Cyclases From Trypanosoma Brucei In Their Monomeric State Length = 231 Back     alignment and structure
>pdb|1FX2|A Chain A, Structural Analysis Of Adenylate Cyclases From Trypanosoma Brucei In Their Monomeric State Length = 235 Back     alignment and structure
>pdb|3R5G|A Chain A, Crystal Structure Of The Adenylyl Cyclase Cyab From P. Aeruginosa Length = 198 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query226
3uvj_A225 Guanylate cyclase soluble subunit alpha-3; nitric 3e-87
1yk9_A204 Adenylate cyclase; beta-alpha-beta sandwich, struc 7e-85
2wz1_A219 Guanylate cyclase soluble subunit beta-1; lyase, G 7e-81
1ab8_A220 Adenylyl cyclase; lyase, complex (transferase-inhi 6e-79
1azs_A220 VC1; complex (lyase/hydrolase), hydrolase, signal 1e-76
3et6_A190 Soluble guanylyl cyclase beta; guanylate cyclase, 2e-75
1fx2_A235 Receptor-type adenylate cyclase gresag 4.1; CAMP, 1e-46
1y10_A407 Hypothetical protein RV1264/MT1302; adenylyl cycla 1e-40
2w01_A208 Adenylate cyclase; guanylyl cyclase, class III nuc 1e-20
1ybt_A184 Hydrolase, alpha/beta hydrolase fold family; cycla 2e-19
3mr7_A189 Adenylate/guanylate cyclase/hydrolase, alpha/beta 4e-19
3r5g_A198 CYAB; adenylyl cyclase, lyase; 1.50A {Pseudomonas 1e-18
1wc3_A219 Adenylate cyclase; soluble adenylyl cyclase, CAMP 1e-17
>3uvj_A Guanylate cyclase soluble subunit alpha-3; nitric oxide, structural genomics, structural genomics conso SGC, CGMP biosynthesis; 2.08A {Homo sapiens} Length = 225 Back     alignment and structure
 Score =  256 bits (656), Expect = 3e-87
 Identities = 65/175 (37%), Positives = 92/175 (52%), Gaps = 34/175 (19%)

Query: 39  QVPAENFDSVTIYFSDIVGFTNISADSSPMEVVNMLNTLYKLFDSRIRKYDVYKVETIGD 98
            V A+ F +VT+ FSDIVGFT I +  SP++V+ MLN LY  FD +  + DVYKVETIGD
Sbjct: 6   VVQAKKFSNVTMLFSDIVGFTAICSQCSPLQVITMLNALYTRFDQQCGELDVYKVETIGD 65

Query: 99  AYMVVSGLPQRNGKSPGTAISFYIRNIGSFGGLGTKGFFRPFSGTLHVGEIATMSLDLLV 158
           AY V  GL +                                    H  +IA M+L ++ 
Sbjct: 66  AYCVAGGLHKE--------------------------------SDTHAVQIALMALKMME 93

Query: 159 GIEHFKIPHRPNDKLEIRVGINTGPCVAGVVGTTMPRYCLFGDTINTASRMESAG 213
             +    PH   + +++R+G+++G   AGVVG  MPRYCLFG+ +  A++ ES  
Sbjct: 94  LSDEVMSPH--GEPIKMRIGLHSGSVFAGVVGVKMPRYCLFGNNVTLANKFESCS 146
>1yk9_A Adenylate cyclase; beta-alpha-beta sandwich, structural genomics, PSI, protein structure initiative; 2.70A {Mycobacterium tuberculosis} Length = 204 Back     alignment and structure
>2wz1_A Guanylate cyclase soluble subunit beta-1; lyase, GUCY1, metal-binding, CGMP biosynthesis, nucleotide-B cyclase, GUCY1B3, GTP-binding; 1.63A {Homo sapiens} PDB: 3uvj_B Length = 219 Back     alignment and structure
>1ab8_A Adenylyl cyclase; lyase, complex (transferase-inhibitor); HET: FOK; 2.20A {Rattus norvegicus} SCOP: d.58.29.1 PDB: 1azs_B* 1cjk_B* 1cjt_B* 1cju_B* 1cjv_B* 1cs4_B* 1tl7_B* 1u0h_B* 2gvd_B* 2gvz_B* 3c14_B* 3c15_B* 3c16_B* 3e8a_B* 3g82_B* 3maa_B* 1cul_B* Length = 220 Back     alignment and structure
>1azs_A VC1; complex (lyase/hydrolase), hydrolase, signal transducing protein, cyclase, effector enzyme; HET: GSP FKP; 2.30A {Canis lupus familiaris} SCOP: d.58.29.1 PDB: 1cs4_A* 1u0h_A* 2gvd_A* 2gvz_A* 3c14_A* 3c15_A* 3c16_A* 3e8a_A* 3g82_A* 3maa_A* 1cul_A* 1cjk_A* 1cju_A* 1cjv_A* 1cjt_A* 1tl7_A* Length = 220 Back     alignment and structure
>3et6_A Soluble guanylyl cyclase beta; guanylate cyclase, dimethylarsenic, lyase, membrane, transmembrane; 2.55A {Chlamydomonas reinhardtii} PDB: 3et6_B Length = 190 Back     alignment and structure
>1fx2_A Receptor-type adenylate cyclase gresag 4.1; CAMP, trypanosomes, adenylyl cyclases, monomer-dimer, catalysis, lyase; 1.46A {Trypanosoma brucei} SCOP: d.58.29.1 PDB: 1fx4_A Length = 235 Back     alignment and structure
>1y10_A Hypothetical protein RV1264/MT1302; adenylyl cyclase fold, lyase; HET: 1PE; 2.30A {Mycobacterium tuberculosis} PDB: 1y11_A* Length = 407 Back     alignment and structure
>2w01_A Adenylate cyclase; guanylyl cyclase, class III nucleotidyl cyclase, lyase; 2.31A {Synechocystis SP} Length = 208 Back     alignment and structure
>1ybt_A Hydrolase, alpha/beta hydrolase fold family; cyclase homology domain, CHD, RV1900C; 2.31A {Mycobacterium tuberculosis} PDB: 1ybu_A* Length = 184 Back     alignment and structure
>3mr7_A Adenylate/guanylate cyclase/hydrolase, alpha/beta family; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.60A {Ruegeria pomeroyi} Length = 189 Back     alignment and structure
>3r5g_A CYAB; adenylyl cyclase, lyase; 1.50A {Pseudomonas aeruginosa} Length = 198 Back     alignment and structure
>1wc3_A Adenylate cyclase; soluble adenylyl cyclase, CAMP signaling, lyase; HET: APC; 1.9A {Spirulina platensis} SCOP: d.58.29.1 PDB: 1wc0_A* 1wc4_A* 1wc5_A* 2bw7_A* 1wc1_A* 1wc6_A* Length = 219 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query226
3uvj_A225 Guanylate cyclase soluble subunit alpha-3; nitric 100.0
1azs_A220 VC1; complex (lyase/hydrolase), hydrolase, signal 100.0
1ab8_A220 Adenylyl cyclase; lyase, complex (transferase-inhi 100.0
2wz1_A219 Guanylate cyclase soluble subunit beta-1; lyase, G 100.0
3et6_A190 Soluble guanylyl cyclase beta; guanylate cyclase, 100.0
2w01_A208 Adenylate cyclase; guanylyl cyclase, class III nuc 100.0
3r5g_A198 CYAB; adenylyl cyclase, lyase; 1.50A {Pseudomonas 100.0
1yk9_A204 Adenylate cyclase; beta-alpha-beta sandwich, struc 100.0
1wc3_A219 Adenylate cyclase; soluble adenylyl cyclase, CAMP 100.0
1fx2_A235 Receptor-type adenylate cyclase gresag 4.1; CAMP, 100.0
1ybt_A184 Hydrolase, alpha/beta hydrolase fold family; cycla 100.0
3mr7_A189 Adenylate/guanylate cyclase/hydrolase, alpha/beta 99.98
1y10_A407 Hypothetical protein RV1264/MT1302; adenylyl cycla 99.96
2qv6_A268 MJ0145, GTP cyclohydrolase III, MJGC; enzyme, FAPY 96.54
3i5c_A206 Fusion of general control protein GCN4 and WSPR R 96.4
3hva_A177 Protein FIMX; ggdef diguanylate cyclase, biofilm, 96.09
3icl_A171 EAL/ggdef domain protein; structural genomics, PSI 96.04
3tvk_A179 DGC, diguanylate cyclase YDEH; putative zinc senso 96.01
3mtk_A178 Diguanylate cyclase/phosphodiesterase; structural 95.83
3ign_A177 Diguanylate cyclase; ggdef domain, A1U3W3_marav, N 95.68
3pjx_A 430 Cyclic dimeric GMP binding protein; ggdef-EAL tand 95.3
3qyy_A167 Response regulator; C-DI-GMP, DGC, ggdef, competit 95.25
3ezu_A342 Ggdef domain protein; multidomain protein of unkno 95.07
3hvw_A176 Diguanylate-cyclase (DGC); alpha-beta protein., st 94.8
3bre_A358 Probable two-component response regulator; protein 94.11
1w25_A459 Stalked-cell differentiation controlling protein; 93.0
3ung_C 693 CMR2DHD; ferredoxin fold, nucleotide-binding, poly 90.54
3hvb_A 437 Protein FIMX; EAL phosphodiesterase, biofilm, C-DI 83.68
2qv6_A268 MJ0145, GTP cyclohydrolase III, MJGC; enzyme, FAPY 81.79
>3uvj_A Guanylate cyclase soluble subunit alpha-3; nitric oxide, structural genomics, structural genomics conso SGC, CGMP biosynthesis; 2.08A {Homo sapiens} Back     alignment and structure
Probab=100.00  E-value=2.8e-38  Score=259.47  Aligned_cols=156  Identities=42%  Similarity=0.728  Sum_probs=144.0

Q ss_pred             ccccCCcccCcEEEEEEecCCchhhcCCCCHHHHHHHHHHHHHHHHHHHHhcCcEEEeEeCcEEEEEeCCCCCCCCCCCc
Q psy14005         37 DFQVPAENFDSVTIYFSDIVGFTNISADSSPMEVVNMLNTLYKLFDSRIRKYDVYKVETIGDAYMVVSGLPQRNGKSPGT  116 (226)
Q Consensus        37 ~~~~~~~~~~~vtvlf~di~~ft~l~~~~~~~~~~~~l~~~~~~~~~~i~~~gG~i~k~~GD~~la~fg~~~~~~~~~~~  116 (226)
                      ++...+++++++||||+||+|||.+++.++++++..+||.|+..+++++..|||+++|++||++|++||+|....     
T Consensus         4 g~~~~~~~~~~vtvlF~Di~gfT~l~~~~~~~~~~~~ln~~~~~~~~~i~~~~g~v~k~~GD~~ma~fg~p~~~~-----   78 (225)
T 3uvj_A            4 GQVVQAKKFSNVTMLFSDIVGFTAICSQCSPLQVITMLNALYTRFDQQCGELDVYKVETIGDAYCVAGGLHKESD-----   78 (225)
T ss_dssp             -CEEEEEEEEEEEEEEEEETTHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHTCEEECCSTTCEEEEESSSSCCT-----
T ss_pred             CCccCCcccceEEEEEEEccChHHHHhcCCHHHHHHHHHHHHHHHHHHHHhcCeEEEEeeCcEEEEEECCCCCch-----
Confidence            445566788999999999999999999999999999999999999999999999999999999999999998776     


Q ss_pred             chhhhhhccCCCCCCCCCCccCCCCccchHHHHHHHHHHHHHHhhhccCCCCCCCceeEEEeeecceeEEeeecCCCCce
Q psy14005        117 AISFYIRNIGSFGGLGTKGFFRPFSGTLHVGEIATMSLDLLVGIEHFKIPHRPNDKLEIRVGINTGPCVAGVVGTTMPRY  196 (226)
Q Consensus       117 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~i~~~~~~~~~~~~~~~~l~~riGi~~G~v~~g~vG~~~~~~  196 (226)
                                                 +++.+|+.||++++..+..++..  .+.++++|||||+|+|++|++|+.+++|
T Consensus        79 ---------------------------~~a~~a~~~al~~~~~~~~~~~~--~~~~l~~riGih~G~v~~G~iG~~~~~~  129 (225)
T 3uvj_A           79 ---------------------------THAVQIALMALKMMELSDEVMSP--HGEPIKMRIGLHSGSVFAGVVGVKMPRY  129 (225)
T ss_dssp             ---------------------------THHHHHHHHHHHHHHHHTTSBCT--TSCBCCEEEEEEEEEEEEEEECC-CCEE
T ss_pred             ---------------------------HHHHHHHHHHHHHHHHHHHHHhh--cCCceEEEEEEEeccEEEEEecCCCceE
Confidence                                       89999999999999999988744  3467999999999999999999987899


Q ss_pred             eEeCcHHHHHHHHhhcCCCCcEEEeccccC
Q psy14005        197 CLFGDTINTASRMESAGDLPSFFIVTIVMR  226 (226)
Q Consensus       197 ~v~G~~Vn~Aarl~~~a~~g~i~vs~~~~~  226 (226)
                      ++||++||+|+||++.|++++|+||+++|+
T Consensus       130 ~~~Gd~VN~AaRle~~a~~~~I~vS~~~~~  159 (225)
T 3uvj_A          130 CLFGNNVTLANKFESCSVPRKINVSPTTYR  159 (225)
T ss_dssp             EEESHHHHHHHHHHHTSCTTCEEECHHHHH
T ss_pred             EEECcHHHHHHHHHhcCCCCeEEECHHHHH
Confidence            999999999999999999999999999873
>1azs_A VC1; complex (lyase/hydrolase), hydrolase, signal transducing protein, cyclase, effector enzyme; HET: GSP FKP; 2.30A {Canis lupus familiaris} SCOP: d.58.29.1 PDB: 1cs4_A* 1u0h_A* 2gvd_A* 2gvz_A* 3c14_A* 3c15_A* 3c16_A* 3e8a_A* 3g82_A* 3maa_A* 1cul_A* 1cjk_A* 1cju_A* 1cjv_A* 1cjt_A* 1tl7_A* Back     alignment and structure
>1ab8_A Adenylyl cyclase; lyase, complex (transferase-inhibitor); HET: FOK; 2.20A {Rattus norvegicus} SCOP: d.58.29.1 PDB: 1azs_B* 1cjk_B* 1cjt_B* 1cju_B* 1cjv_B* 1cs4_B* 1tl7_B* 1u0h_B* 2gvd_B* 2gvz_B* 3c14_B* 3c15_B* 3c16_B* 3e8a_B* 3g82_B* 3maa_B* 1cul_B* Back     alignment and structure
>2wz1_A Guanylate cyclase soluble subunit beta-1; lyase, GUCY1, metal-binding, CGMP biosynthesis, nucleotide-B cyclase, GUCY1B3, GTP-binding; 1.63A {Homo sapiens} PDB: 3uvj_B Back     alignment and structure
>3et6_A Soluble guanylyl cyclase beta; guanylate cyclase, dimethylarsenic, lyase, membrane, transmembrane; 2.55A {Chlamydomonas reinhardtii} PDB: 3et6_B Back     alignment and structure
>2w01_A Adenylate cyclase; guanylyl cyclase, class III nucleotidyl cyclase, lyase; 2.31A {Synechocystis SP} Back     alignment and structure
>3r5g_A CYAB; adenylyl cyclase, lyase; 1.50A {Pseudomonas aeruginosa} SCOP: d.58.29.0 Back     alignment and structure
>1yk9_A Adenylate cyclase; beta-alpha-beta sandwich, structural genomics, PSI, protein structure initiative; 2.70A {Mycobacterium tuberculosis} Back     alignment and structure
>1wc3_A Adenylate cyclase; soluble adenylyl cyclase, CAMP signaling, lyase; HET: APC; 1.9A {Spirulina platensis} SCOP: d.58.29.1 PDB: 1wc0_A* 1wc4_A* 1wc5_A* 2bw7_A* 1wc1_A* 1wc6_A* Back     alignment and structure
>1fx2_A Receptor-type adenylate cyclase gresag 4.1; CAMP, trypanosomes, adenylyl cyclases, monomer-dimer, catalysis, lyase; 1.46A {Trypanosoma brucei} SCOP: d.58.29.1 PDB: 1fx4_A Back     alignment and structure
>1ybt_A Hydrolase, alpha/beta hydrolase fold family; cyclase homology domain, CHD, RV1900C; 2.31A {Mycobacterium tuberculosis} PDB: 1ybu_A* Back     alignment and structure
>3mr7_A Adenylate/guanylate cyclase/hydrolase, alpha/beta family; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.60A {Ruegeria pomeroyi} Back     alignment and structure
>1y10_A Hypothetical protein RV1264/MT1302; adenylyl cyclase fold, lyase; HET: 1PE; 2.30A {Mycobacterium tuberculosis} PDB: 1y11_A* Back     alignment and structure
>2qv6_A MJ0145, GTP cyclohydrolase III, MJGC; enzyme, FAPY; HET: GTP; 2.00A {Methanocaldococcus jannaschii} Back     alignment and structure
>3i5c_A Fusion of general control protein GCN4 and WSPR R regulator protein; C-DI-GMP, ggdef, leucine zipper, signaling protein; HET: C2E; 1.94A {Pseudomonas aeruginosa PAO1} PDB: 3i5b_A* Back     alignment and structure
>3hva_A Protein FIMX; ggdef diguanylate cyclase, biofilm, C-DI-GMP, transferase; 2.04A {Pseudomonas aeruginosa PAO1} Back     alignment and structure
>3icl_A EAL/ggdef domain protein; structural genomics, PSI-2, protein structure initiative, northeast structural genomics, consortium, NESG; HET: MSE; 2.00A {Methylococcus capsulatus} Back     alignment and structure
>3tvk_A DGC, diguanylate cyclase YDEH; putative zinc sensor, C-DI-GMP, transfe; HET: C2E; 1.80A {Escherichia coli} Back     alignment and structure
>3mtk_A Diguanylate cyclase/phosphodiesterase; structural genomics, PSI-2, protein structure initiative; 2.24A {Caldicellulosiruptor saccharolyticus} Back     alignment and structure
>3ign_A Diguanylate cyclase; ggdef domain, A1U3W3_marav, NESG, MQR89A, structural genomics, PSI-2, protein structure initiative; HET: C2E; 1.83A {Marinobacter aquaeolei VT8} Back     alignment and structure
>3pjx_A Cyclic dimeric GMP binding protein; ggdef-EAL tandem domain, C-DI-GMP receptor, lyase; 2.00A {Pseudomonas fluorescens} PDB: 3pjw_A 3pju_A* 3pjt_A* 3pfm_A Back     alignment and structure
>3qyy_A Response regulator; C-DI-GMP, DGC, ggdef, competitive inhibition, xanthomonas Ca signaling protein-inhibitor complex; HET: C2E; 1.90A {Xanthomonas campestris PV} Back     alignment and structure
>3ezu_A Ggdef domain protein; multidomain protein of unknown function with GG domain, structural genomics, joint center for structural GE JCSG; 1.95A {Geobacter sulfurreducens} Back     alignment and structure
>3hvw_A Diguanylate-cyclase (DGC); alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.70A {Pseudomonas aeruginosa} Back     alignment and structure
>3bre_A Probable two-component response regulator; protein-nucleotide complex, signaling protein; HET: C2E; 2.40A {Pseudomonas aeruginosa} PDB: 3i5a_A* Back     alignment and structure
>1w25_A Stalked-cell differentiation controlling protein; two-component system, ggdef domain, cyclic dinucleotide, cyclic-digmp; HET: C2E; 2.70A {Caulobacter vibrioides} SCOP: c.23.1.1 c.23.1.1 d.58.29.2 PDB: 2v0n_A* 2wb4_A* Back     alignment and structure
>2qv6_A MJ0145, GTP cyclohydrolase III, MJGC; enzyme, FAPY; HET: GTP; 2.00A {Methanocaldococcus jannaschii} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 226
d1azsb_199 d.58.29.1 (B:) Adenylyl cyclase IIC1, domain C2a { 1e-29
d1fx2a_235 d.58.29.1 (A:) Receptor-type monomeric adenylyl cy 7e-29
d1wc1a_197 d.58.29.1 (A:) Adenylate cyclase CyaC {Spirulina p 8e-20
d1azsa_190 d.58.29.1 (A:) Adenylyl cyclase VC1, domain C1a {D 8e-19
>d1azsb_ d.58.29.1 (B:) Adenylyl cyclase IIC1, domain C2a {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 199 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: Nucleotide cyclase
family: Adenylyl and guanylyl cyclase catalytic domain
domain: Adenylyl cyclase IIC1, domain C2a
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  107 bits (267), Expect = 1e-29
 Identities = 47/178 (26%), Positives = 80/178 (44%), Gaps = 30/178 (16%)

Query: 43  ENFDSVTIYFSDIVGFTNISADSS----PMEVVNMLNTLYKLFDSRIRK---YDVYKVET 95
           +++D V + F+ I  F     +S      +E + +LN +   FD  + K     V K++T
Sbjct: 2   QSYDCVCVMFASIPDFKEFYTESDVNKEGLECLRLLNEIIADFDDLLSKPKFSGVEKIKT 61

Query: 96  IGDAYMVVSGLPQRNGKSPGTAISFYIRNIGSFGGLGTKGFFRPFSGTLHVGEIATMSLD 155
           IG  YM  +GL     +                          P    +H+G +   +  
Sbjct: 62  IGSTYMAATGLSAIPSQEH---------------------AQEPERQYMHIGTMVEFAYA 100

Query: 156 LLVGIEHFKIPHRPNDKLEIRVGINTGPCVAGVVGTTMPRYCLFGDTINTASRMESAG 213
           L+  ++         +  ++RVGIN GP +AGV+G   P+Y ++G+T+N ASRM+S G
Sbjct: 101 LVGKLDAI--NKHSFNDFKLRVGINHGPVIAGVIGAQKPQYDIWGNTVNVASRMDSTG 156
>d1fx2a_ d.58.29.1 (A:) Receptor-type monomeric adenylyl cyclase {Trypanosome (Trypanosoma brucei), different isoform [TaxId: 5691]} Length = 235 Back     information, alignment and structure
>d1wc1a_ d.58.29.1 (A:) Adenylate cyclase CyaC {Spirulina platensis [TaxId: 118562]} Length = 197 Back     information, alignment and structure
>d1azsa_ d.58.29.1 (A:) Adenylyl cyclase VC1, domain C1a {Dog (Canis familiaris) [TaxId: 9615]} Length = 190 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query226
d1azsa_190 Adenylyl cyclase VC1, domain C1a {Dog (Canis famil 100.0
d1azsb_199 Adenylyl cyclase IIC1, domain C2a {Rat (Rattus nor 100.0
d1wc1a_197 Adenylate cyclase CyaC {Spirulina platensis [TaxId 100.0
d1fx2a_235 Receptor-type monomeric adenylyl cyclase {Trypanos 99.96
d1w25a3162 Response regulator PleD, C-terminal domain {Caulob 96.01
>d1azsa_ d.58.29.1 (A:) Adenylyl cyclase VC1, domain C1a {Dog (Canis familiaris) [TaxId: 9615]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: Nucleotide cyclase
family: Adenylyl and guanylyl cyclase catalytic domain
domain: Adenylyl cyclase VC1, domain C1a
species: Dog (Canis familiaris) [TaxId: 9615]

Probab=100.00  E-value=3.8e-37  Score=244.66  Aligned_cols=154  Identities=27%  Similarity=0.500  Sum_probs=142.9

Q ss_pred             ccCCcccCcEEEEEEecCCchhhcCCCCHHHHHHHHHHHHHHHHHHHHhcCcEEEeEeCcEEEEEeCCCCCCCCCCCcch
Q psy14005         39 QVPAENFDSVTIYFSDIVGFTNISADSSPMEVVNMLNTLYKLFDSRIRKYDVYKVETIGDAYMVVSGLPQRNGKSPGTAI  118 (226)
Q Consensus        39 ~~~~~~~~~vtvlf~di~~ft~l~~~~~~~~~~~~l~~~~~~~~~~i~~~gG~i~k~~GD~~la~fg~~~~~~~~~~~a~  118 (226)
                      +.+.+++++|||||+||+|||.+++.++|+++.+++|.|+..+.+++.+|||+++|++||++|++||.|....       
T Consensus         6 ~~~~~~~~~Vtvlf~Di~gfT~l~~~~~~~~~~~~l~~~~~~~~~~i~~~gg~~~k~~GD~~~a~f~~~~~~~-------   78 (190)
T d1azsa_           6 KIYIQKHDNVSILFADIEGFTSLASQCTAQELVMTLNELFARFDKLAAENHCLRIKILGDCYYCVSGLPEARA-------   78 (190)
T ss_dssp             CCEEEEEEEEEEEEEEEETHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHTEEEEEEETTEEEEEESCSSCCS-------
T ss_pred             hhhhhcCCcEEEEEEEcCChhHHHHhCCHHHHHHHHHHHHHHHhhcccccCccccccceeEEEEEecCCCccc-------
Confidence            4566778899999999999999999999999999999999999999999999999999999999999988766       


Q ss_pred             hhhhhccCCCCCCCCCCccCCCCccchHHHHHHHHHHHHHHhhhccCCCCCCCceeEEEeeecceeEEeeecCCCCceeE
Q psy14005        119 SFYIRNIGSFGGLGTKGFFRPFSGTLHVGEIATMSLDLLVGIEHFKIPHRPNDKLEIRVGINTGPCVAGVVGTTMPRYCL  198 (226)
Q Consensus       119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~i~~~~~~~~~~~~~~~~l~~riGi~~G~v~~g~vG~~~~~~~v  198 (226)
                                               +++.+|+.+|+++.+.+++++.  ..+.++++|||||+|++++|.+|+.+++||+
T Consensus        79 -------------------------d~~~~a~~~a~~~~~~~~~~~~--~~~~~l~~riGih~G~v~~g~~G~~~~~~~~  131 (190)
T d1azsa_          79 -------------------------DHAHCCVEMGMDMIEAISLVRE--MTGVNVNMRVGIHSGRVHCGVLGLRKWQFDV  131 (190)
T ss_dssp             -------------------------THHHHHHHHHHHHHHHHHHHHH--HHCSCCEEEEEEEEEEEEEEECSSSSCCCEE
T ss_pred             -------------------------cchhHHHHHHHHHHHHHhhhhc--ccccccceEEEEeeeccccccccccccccce
Confidence                                     7889999999999999988763  3345799999999999999999998779999


Q ss_pred             eCcHHHHHHHHhhcCCCCcEEEeccccC
Q psy14005        199 FGDTINTASRMESAGDLPSFFIVTIVMR  226 (226)
Q Consensus       199 ~G~~Vn~Aarl~~~a~~g~i~vs~~~~~  226 (226)
                      ||++||.|+||++.+++|+|+||+++|+
T Consensus       132 ~G~~Vn~Aarl~~~a~~~~ilvS~~~~~  159 (190)
T d1azsa_         132 WSNDVTLANHMEAGGKAGRIHITKATLS  159 (190)
T ss_dssp             ESHHHHHHHHHHHTCCTTSEEECSTTTT
T ss_pred             eccceehHHHHhccCCCCEEEECHHHHH
Confidence            9999999999999999999999999985
>d1azsb_ d.58.29.1 (B:) Adenylyl cyclase IIC1, domain C2a {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1wc1a_ d.58.29.1 (A:) Adenylate cyclase CyaC {Spirulina platensis [TaxId: 118562]} Back     information, alignment and structure
>d1fx2a_ d.58.29.1 (A:) Receptor-type monomeric adenylyl cyclase {Trypanosome (Trypanosoma brucei), different isoform [TaxId: 5691]} Back     information, alignment and structure
>d1w25a3 d.58.29.2 (A:294-455) Response regulator PleD, C-terminal domain {Caulobacter crescentus [TaxId: 155892]} Back     information, alignment and structure