Psyllid ID: psy14070


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-
GFRTGYIYRTPLIKGDPPRPRNDVEVPPAVSSLGYLLEEEEMYRNGWKGRKSNDRTRWLNSPNVWKGRKSNDRTRWLNSPNVYQKVEILETGTSDPKKITKVETLITSSSK
ccccccccccccccccccccccccccccccccccHHHHHHHHHHccccccccccccccccccHHHHHccccccccccccccccEEEEEcccccccccccEEEEEEcccccc
cccccccEccccEccccccccccEEccccEEEEEEcccccccccccccccccccccccccHHHHHHHHHHcccccEcccccccEEEEEcccccccccEEEEEEEEEccccc
gfrtgyiyrtplikgdpprprndvevppavsslgylleeEEMYRngwkgrksndrtrwlnspnvwkgrksndrtrwlnspnvyQKVEIletgtsdpkkiTKVETLITSSSK
gfrtgyiyrtplikgdpprprndvevppavSSLGYLLEEEEMYRngwkgrksndrtrwlnspnvwkgrksndrtrwlnspnvyqkveiletgtsdpkkitkvetlitsssk
GFRTGYIYRTPLIKGDPPRPRNDVEVPPAVSSLGYLLEEEEMYRNGWKGRKSNDRTRWLNSPNVWKGRKSNDRTRWLNSPNVYQKVEILETGTSDPKKITKVETLITSSSK
*****YIYRTPL********************LGYLLEEEEMYRNGW*********RWLNSPNVWK*******TRWLNSPNVYQKVEIL**********************
GFRTGYIYRTPL***************PAVSSLGYLLEEEEMYRNGWKGRKSND*********************WLNSPNVY****************************
GFRTGYIYRTPLIKGDPPRPRNDVEVPPAVSSLGYLLEEEEMYRNGWKGRKSNDRTRWLNSPNVWKGRKSNDRTRWLNSPNVYQKVEILETGTSDPKKITKVETLITSSSK
*FRTGYIYRTPLIKGDPPRPRNDVEVPPAVSSLGYLLEEEEMYRNGWKGRK**DRTRWLNSPNVWKGRKSNDRTRWLNSPNVYQKVEILETGTSDPKKITKVETLIT****
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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GFRTGYIYRTPLIKGDPPRPRNDVEVPPAVSSLGYLLEEEEMYRNGWKGRKSNDRTRWLNSPNVWKGRKSNDRTRWLNSPNVYQKVEILETGTSDPKKITKVETLITSSSK
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query111 2.2.26 [Sep-21-2011]
Q02645 1156 Protein hu-li tai shao OS no N/A 0.747 0.071 0.647 3e-26
Q9U9K0 732 Adducin-related protein 1 yes N/A 0.765 0.116 0.390 2e-10
Q9UEY8 706 Gamma-adducin OS=Homo sap yes N/A 0.738 0.116 0.365 5e-09
Q9QYB5 706 Gamma-adducin OS=Mus musc yes N/A 0.738 0.116 0.346 9e-09
Q62847 705 Gamma-adducin OS=Rattus n yes N/A 0.738 0.116 0.346 2e-08
Q5R5V7 726 Beta-adducin OS=Pongo abe no N/A 0.675 0.103 0.302 4e-05
P35612 726 Beta-adducin OS=Homo sapi no N/A 0.675 0.103 0.302 4e-05
Q9QYB8 725 Beta-adducin OS=Mus muscu no N/A 0.648 0.099 0.255 0.0003
>sp|Q02645|HTS_DROME Protein hu-li tai shao OS=Drosophila melanogaster GN=hts PE=1 SV=2 Back     alignment and function desciption
 Score =  116 bits (291), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 68/105 (64%), Positives = 76/105 (72%), Gaps = 22/105 (20%)

Query: 1   GFRTGYIYRTPLIKGDPPRPRNDVEVPPAVSSLGYLLEEEEMYRNG-WKG---RKSNDRT 56
           G+RTGYIYR PLIK DPP+P+NDVE+PPAVSSLGYLLEEEE++R G WK    RK  DR+
Sbjct: 386 GYRTGYIYRHPLIKSDPPKPKNDVELPPAVSSLGYLLEEEELFRQGIWKKGDIRKGGDRS 445

Query: 57  RWLNSPNVWKGRKSNDRTRWLNSPNVYQKVEILETGTSDPKKITK 101
           RW                  LNSPNVYQKVE+LETGT DPKKITK
Sbjct: 446 RW------------------LNSPNVYQKVEVLETGTPDPKKITK 472




Required for assembling actin at ring canals in developing egg chambers. Probably interacts with other developmental proteins involved in nurse cell/oocyte transport through the ring canals.
Drosophila melanogaster (taxid: 7227)
>sp|Q9U9K0|ADD1_CAEEL Adducin-related protein 1 OS=Caenorhabditis elegans GN=add-1 PE=2 SV=2 Back     alignment and function description
>sp|Q9UEY8|ADDG_HUMAN Gamma-adducin OS=Homo sapiens GN=ADD3 PE=1 SV=1 Back     alignment and function description
>sp|Q9QYB5|ADDG_MOUSE Gamma-adducin OS=Mus musculus GN=Add3 PE=1 SV=2 Back     alignment and function description
>sp|Q62847|ADDG_RAT Gamma-adducin OS=Rattus norvegicus GN=Add3 PE=1 SV=2 Back     alignment and function description
>sp|Q5R5V7|ADDB_PONAB Beta-adducin OS=Pongo abelii GN=ADD2 PE=2 SV=3 Back     alignment and function description
>sp|P35612|ADDB_HUMAN Beta-adducin OS=Homo sapiens GN=ADD2 PE=1 SV=3 Back     alignment and function description
>sp|Q9QYB8|ADDB_MOUSE Beta-adducin OS=Mus musculus GN=Add2 PE=1 SV=4 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query111
158293046 472 AGAP004852-PB [Anopheles gambiae str. PE 0.783 0.184 0.633 2e-30
242013985 1931 hypothetical protein Phum_PHUM335260 [Pe 0.747 0.042 0.641 4e-29
158293044 716 AGAP004852-PA [Anopheles gambiae str. PE 0.747 0.115 0.647 4e-29
170046228 710 adducin [Culex quinquefasciatus] gi|1678 0.747 0.116 0.638 3e-28
194753162 1160 GF12608 [Drosophila ananassae] gi|190620 0.747 0.071 0.638 4e-28
157128356 710 adducin [Aedes aegypti] gi|108872626|gb| 0.747 0.116 0.628 4e-28
157128354 718 adducin [Aedes aegypti] gi|108872625|gb| 0.747 0.115 0.628 4e-28
312381858 656 hypothetical protein AND_05762 [Anophele 0.747 0.126 0.638 8e-28
24655690 495 hu li tai shao, isoform C [Drosophila me 0.783 0.175 0.642 2e-25
194881340 2228 GG20909 [Drosophila erecta] gi|190657993 0.747 0.037 0.657 2e-25
>gi|158293046|ref|XP_001688561.1| AGAP004852-PB [Anopheles gambiae str. PEST] gi|157016918|gb|EDO64038.1| AGAP004852-PB [Anopheles gambiae str. PEST] Back     alignment and taxonomy information
 Score =  135 bits (341), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 69/109 (63%), Positives = 79/109 (72%), Gaps = 22/109 (20%)

Query: 1   GFRTGYIYRTPLIKGDPPRPRNDVEVPPAVSSLGYLLEEEEMYRNG-WKG---RKSNDRT 56
           GFRTGYI+R PLIKGD P+PRND+EVPPAVSSLGYL+EEEE+++ G W+    RK  DRT
Sbjct: 375 GFRTGYIFRNPLIKGDVPKPRNDIEVPPAVSSLGYLIEEEELFKQGIWRKGDPRKVGDRT 434

Query: 57  RWLNSPNVWKGRKSNDRTRWLNSPNVYQKVEILETGTSDPKKITKVETL 105
           RW                  LNSPNVYQKVE+LETGT DPKKITKVE +
Sbjct: 435 RW------------------LNSPNVYQKVEVLETGTPDPKKITKVEIV 465




Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242013985|ref|XP_002427679.1| hypothetical protein Phum_PHUM335260 [Pediculus humanus corporis] gi|212512109|gb|EEB14941.1| hypothetical protein Phum_PHUM335260 [Pediculus humanus corporis] Back     alignment and taxonomy information
>gi|158293044|ref|XP_314339.4| AGAP004852-PA [Anopheles gambiae str. PEST] gi|157016917|gb|EAA09725.4| AGAP004852-PA [Anopheles gambiae str. PEST] Back     alignment and taxonomy information
>gi|170046228|ref|XP_001850676.1| adducin [Culex quinquefasciatus] gi|167869062|gb|EDS32445.1| adducin [Culex quinquefasciatus] Back     alignment and taxonomy information
>gi|194753162|ref|XP_001958886.1| GF12608 [Drosophila ananassae] gi|190620184|gb|EDV35708.1| GF12608 [Drosophila ananassae] Back     alignment and taxonomy information
>gi|157128356|ref|XP_001661417.1| adducin [Aedes aegypti] gi|108872626|gb|EAT36851.1| AAEL011105-PA [Aedes aegypti] Back     alignment and taxonomy information
>gi|157128354|ref|XP_001661416.1| adducin [Aedes aegypti] gi|108872625|gb|EAT36850.1| AAEL011105-PB [Aedes aegypti] Back     alignment and taxonomy information
>gi|312381858|gb|EFR27501.1| hypothetical protein AND_05762 [Anopheles darlingi] Back     alignment and taxonomy information
>gi|24655690|ref|NP_725890.1| hu li tai shao, isoform C [Drosophila melanogaster] gi|281363751|ref|NP_001163203.1| hu li tai shao, isoform H [Drosophila melanogaster] gi|281363755|ref|NP_001163204.1| hu li tai shao, isoform J [Drosophila melanogaster] gi|9885263|gb|AAG01378.1|AF151706_1 adducin-like protein R2 isoform [Drosophila melanogaster] gi|9885265|gb|AAG01379.1|AF151707_1 adducin-like protein N32 isoform [Drosophila melanogaster] gi|23240227|gb|AAM70851.2| hu li tai shao, isoform C [Drosophila melanogaster] gi|272432563|gb|ACZ94475.1| hu li tai shao, isoform H [Drosophila melanogaster] gi|272432565|gb|ACZ94476.1| hu li tai shao, isoform J [Drosophila melanogaster] Back     alignment and taxonomy information
>gi|194881340|ref|XP_001974806.1| GG20909 [Drosophila erecta] gi|190657993|gb|EDV55206.1| GG20909 [Drosophila erecta] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query111
FB|FBgn0263391 1156 hts "hu li tai shao" [Drosophi 0.774 0.074 0.676 4.9e-29
WB|WBGene00000072 732 add-1 [Caenorhabditis elegans 0.765 0.116 0.390 1.5e-09
UNIPROTKB|F1S5M9 706 ADD3 "Uncharacterized protein" 0.558 0.087 0.411 4.1e-09
UNIPROTKB|Q08E01 674 ADD3 "Uncharacterized protein" 0.558 0.091 0.411 4.5e-09
ZFIN|ZDB-GENE-080718-6 722 add3b "adducin 3 (gamma) b" [D 0.540 0.083 0.462 1.7e-08
UNIPROTKB|D4A3Q7 670 Add3 "Gamma-adducin" [Rattus n 0.846 0.140 0.320 2e-08
RGD|2043 705 Add3 "adducin 3 (gamma)" [Ratt 0.846 0.133 0.320 2.1e-08
UNIPROTKB|Q62847 705 Add3 "Gamma-adducin" [Rattus n 0.846 0.133 0.320 2.1e-08
UNIPROTKB|F1NEA1 677 ADD3 "Uncharacterized protein" 0.558 0.091 0.397 4.2e-08
UNIPROTKB|E2QZE7 706 ADD3 "Uncharacterized protein" 0.558 0.087 0.411 4.5e-08
FB|FBgn0263391 hts "hu li tai shao" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 335 (123.0 bits), Expect = 4.9e-29, P = 4.9e-29
 Identities = 69/102 (67%), Positives = 78/102 (76%)

Query:     1 GFRTGYIYRTPLIKGDPPRPRNDVEVPPAVSSLGYLLEEEEMYRNG-WKGRKSNDRTRWL 59
             G+RTGYIYR PLIK DPP+P+NDVE+PPAVSSLGYLLEEEE++R G WK  K + R    
Sbjct:   386 GYRTGYIYRHPLIKSDPPKPKNDVELPPAVSSLGYLLEEEELFRQGIWK--KGDIR---- 439

Query:    60 NSPNVWKGRKSNDRTRWLNSPNVYQKVEILETGTSDPKKITK 101
                      K  DR+RWLNSPNVYQKVE+LETGT DPKKITK
Sbjct:   440 ---------KGGDRSRWLNSPNVYQKVEVLETGTPDPKKITK 472




GO:0008302 "female germline ring canal formation, actin assembly" evidence=NAS;IMP;TAS
GO:0045169 "fusome" evidence=NAS;IDA;TAS
GO:0045170 "spectrosome" evidence=IDA;TAS
GO:0045478 "fusome organization" evidence=TAS
GO:0005886 "plasma membrane" evidence=IDA
GO:0005737 "cytoplasm" evidence=IDA
GO:0048135 "female germ-line cyst formation" evidence=TAS
GO:0007294 "germarium-derived oocyte fate determination" evidence=TAS
GO:0045172 "germline ring canal" evidence=NAS;IDA;TAS
GO:0035183 "female germline ring canal inner rim" evidence=TAS
GO:0003779 "actin binding" evidence=ISS
GO:0048134 "germ-line cyst formation" evidence=TAS
GO:0030721 "spectrosome organization" evidence=TAS
GO:0046872 "metal ion binding" evidence=IEA
GO:0007282 "cystoblast division" evidence=IMP
GO:0030723 "ovarian fusome organization" evidence=IMP
GO:0051297 "centrosome organization" evidence=IMP
GO:0030724 "testicular fusome organization" evidence=IMP
GO:0000212 "meiotic spindle organization" evidence=IMP
GO:0005811 "lipid particle" evidence=IDA
GO:0045214 "sarcomere organization" evidence=IMP
GO:0007527 "adult somatic muscle development" evidence=IMP
GO:0072499 "photoreceptor cell axon guidance" evidence=IGI;IMP;IPI
GO:0007411 "axon guidance" evidence=IMP
WB|WBGene00000072 add-1 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
UNIPROTKB|F1S5M9 ADD3 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|Q08E01 ADD3 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-080718-6 add3b "adducin 3 (gamma) b" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|D4A3Q7 Add3 "Gamma-adducin" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
RGD|2043 Add3 "adducin 3 (gamma)" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|Q62847 Add3 "Gamma-adducin" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|F1NEA1 ADD3 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|E2QZE7 ADD3 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 111
KOG3699|consensus 598 99.89
>KOG3699|consensus Back     alignment and domain information
Probab=99.89  E-value=2e-24  Score=189.25  Aligned_cols=87  Identities=32%  Similarity=0.637  Sum_probs=78.5

Q ss_pred             CCccccccccccccCCCCCCCCceeeCCccccccccccchhhhccccccccccccccccCCCccccccccccCcccccCC
Q psy14070          1 GFRTGYIYRTPLIKGDPPRPRNDVEVPPAVSSLGYLLEEEEMYRNGWKGRKSNDRTRWLNSPNVWKGRKSNDRTRWLNSP   80 (111)
Q Consensus         1 GyRTGY~YR~P~lr~ek~r~~sDVEiPptvss~~~~~e~d~~~~~~~k~~~~~~~t~~lns~~~~~~Rqq~ektRWLNSP   80 (111)
                      ||||||+||+|+++ ++++++|||||||++++|+|.+|+.  +.++++++               .++|++|+|||||+|
T Consensus       278 ~~rtg~~yR~p~~~-~k~~~~sdV~~P~~v~~~~~~~d~~--~v~~~r~~---------------~~~~~~e~tRwlNsp  339 (598)
T KOG3699|consen  278 GYRTGYNYRHPALR-EKPSKKSDVEIPATVTAFGFATDGA--PVSPLRQA---------------PQKQQREKTRWLNLP  339 (598)
T ss_pred             cccccccccchhhc-ccCCCccceecchhhhhhhhhccCC--cCChhhhc---------------cchhhhhhhhhcCCc
Confidence            89999999999998 9999999999999999998666654  45666665               389999999999999


Q ss_pred             CcceeeeeeccCCCCCccccEEEEe
Q psy14070         81 NVYQKVEILETGTSDPKKITKVETL  105 (111)
Q Consensus        81 N~Y~kv~v~e~g~~sPK~~TkW~~~  105 (111)
                      |.|++++.+|.++.+||++|+|+.+
T Consensus       340 n~~~~~~~~e~~~~npka~t~w~~~  364 (598)
T KOG3699|consen  340 NKVDEVDEEERGMRNPKAKTTWVKE  364 (598)
T ss_pred             cccccccHHhhccCCcccceeeeec
Confidence            9999999999999999999999984




Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00